Citrus Sinensis ID: 018503

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-----
Protein Sequence
MDVLLCRASTLTWSQSISPCLHSSAKPFSRCEAKKFRVFCTSDHTQKASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDYLAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPFKYRYVKDALKAIMS
Secondary Structure (PSIPRED)
cccccccccccccccccccccccccccccHHHHHHHHHcccccccccccccEEEEEccccHHHHHHHHHHHHcccEEEEEEcccccccccccccccccccccccccccccccccccccEEEEcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHccccccccEEEEEcEEEEEcccccEEEccccccccccHHHHHHHHHHHHHcccccccEEEEEEcEEEccccccHHHHHHHHHccccccccccccccccccHHHHHHHHHHHHHccccccccEEcccccccHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHcccccccHHHHHcccccccccHHHHHHHHHc
Secondary Structure Prediction (SSPRO)
ccEEEEcccEEcccccccccccccccccccccccEEEEEEEccccccccccEEEEEccccHHHHHHHHHHHHcccEEEEEEccHHHHHHHccccccEEEEEEccccccHHHHHcccccEEEEcccccHcccccHHHHHHHHHHHHHHHHHHHHHHHHcccccccEEEEEEEEEEEEcccccEEEccccccccHHHHHHHHHHHHHHHHHHcccEEEEEEEEEEEcccccHHHHcccccEEccccccccccccccHEcHHHHHHHHHHHHHcccccccEEccccccccHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHccccccHHHHHHcccEEEcccHHHHHHHHHc
Coil and Loop (DISEMBL)
MDVLLCrastltwsqsispclhssakpfsrceakkfrvfctsdhtqkasqmtvsvtgatgfIGRRLVQRLQADNHQVrvltrsrskaelifpgkktrffpgvmiaeepqwrdciqgsTAVVNlagtpigtrwSSEIKKEIKESRIRVTSKVVDLinespegvrpsVLVSATAlgyygtsetevfdesspsgnDYLAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFmmfaggplgsgqqwfswIHLDDIVNLIYEAlsnpsyrgvingtapnpvRLAEMCDHLgnvlgrpswlpvpEFALKAVLGEGAFVVLEGQRVVPArakelgfpfkYRYVKDALKAIMS
Flexible Loop (DISEMBL)
MDVLLCRAStltwsqsispclhssakPFSRCEAKKFRVFCTSdhtqkasqmtvsvTGATGFIGRRLVQrlqadnhqvrvltrsrskaelifpgkktrffpGVMIAEEPQWRDCIQGSTAVVNLagtpigtrwsseikkeikesrirvtskvvdlinespegvrpsvlVSATALGYYGTSetevfdesspsGNDYLAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVparakelgfpfkyryVKDALKAIMS
Low Complexity Region (SEG)
MDVLLCRASTLTWSQSISPCLHSSAKPFSRCEAKKFRVFCTSDHTQKASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDYLAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPFKYRYVKDALKAIMS
Disordered region (IsUnstruct)
**VLLCRASTLTWSQSISPCLHSSAKPFSRCEAKKFRVFCTSDHTQKASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVF*******NDYLAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMF*********QWFSWIHLDDIVNLIYEALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPFKYRYVKDALK****
Disordered Region (DISOPRED)
*******ASTLTWSQSISP*************A*****************MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSK****FPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDYLAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPFKYRYVKDALKAIMS
Disordered Region (DISEMBL)
MDVLLCRASTLTWSQSISPCLHSSAKPFSRCEAKKFRVFCTSDHTQKASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTS**********SGNDYLAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPFKYRYVKDALKAIMS
Disordered Region (DISPRO)
*DVLLCRASTLTWSQSISPCLHSSAKPFSRCEAKKFRVFCTSDHTQKASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDYLAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPFKYRYVKDALKAIMS
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MDVLLCRASTLTWSQSISPCLHSSAKPFSRCEAKKFRVFCTSDHTQKASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDYLAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPFKYRYVKDALKAIMS
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	355	2.2.26 [Sep-21-2011]
P73467	307	Epimerase family protein	N/A	no	0.839	0.970	0.498	2e-78
P77775	297	Epimerase family protein	N/A	no	0.828	0.989	0.408	2e-57
O31574	303	Epimerase family protein	yes	no	0.833	0.976	0.351	1e-46
P71373	296	Epimerase family protein	yes	no	0.814	0.976	0.359	7e-45
Q5M8N4	308	Epimerase family protein	yes	no	0.8	0.922	0.343	8e-45
O32960	307	Epimerase family protein	yes	no	0.822	0.951	0.351	2e-44
Q17QH8	294	Epimerase family protein	yes	no	0.811	0.979	0.347	4e-44
Q4L4J7	299	Epimerase family protein	yes	no	0.814	0.966	0.337	1e-42
Q8CPY7	299	Epimerase family protein	yes	no	0.802	0.953	0.338	1e-41
Q5HQV8	299	Epimerase family protein	yes	no	0.802	0.953	0.338	1e-41

>sp|P73467|Y1223_SYNY3 Epimerase family protein slr1223 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=slr1223 PE=3 SV=2

 Score =  293 bits (749), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 155/311 (49%), Positives = 207/311 (66%), Gaps = 13/311 (4%)

Query: 51  MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIF-PGKKTRFFPGV-MIAEEP 108
           M + +TGATGF+G  LV  L    H++ +L RS SKA+ +F PG     FP +  IA E 
Sbjct: 1   MKIILTGATGFVGCSLVPLLHQQGHELTLLVRSVSKAQRLFAPGS----FPQLKAIAYEA 56

Query: 109 ----QWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRP 164
                W+  + G  AV+NLAG PI  RW+   K EI +SR   T K+V+ I ++    +P
Sbjct: 57  TKSGDWQKVVDGQDAVINLAGEPISERWTEAYKAEIFDSRKLGTEKLVEAIAKADR--KP 114

Query: 165 SVLVSATALGYYGTSETEVFDESSPSGNDYLAEVCREWEGTALKVNK-DVRLALIRIGIV 223
            V++S +A+GYYGTSET  F ESS  G+D+LAEVC+ WE  A +V +  VRL + RIGIV
Sbjct: 115 QVMISGSAIGYYGTSETATFTESSKPGDDFLAEVCQAWENAAHQVEQLGVRLVVFRIGIV 174

Query: 224 LGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRGVINGTAP 283
           LG DGGALAKM+P F +FAGGPLGSG+QWFSWI   D++ LI +AL++ + RG  N TAP
Sbjct: 175 LGADGGALAKMLPPFKLFAGGPLGSGEQWFSWIDRRDLIALIDKALTDSTLRGTYNATAP 234

Query: 284 NPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPFKY 343
           NPV++ E C  LG VL RPSWLPVP+ AL+ +LGEGA +VLEGQ V+P    +  F F+ 
Sbjct: 235 NPVKMKEFCHTLGKVLARPSWLPVPDIALELLLGEGAKLVLEGQEVLPGAISKTDFQFQA 294

Query: 344 RYVKDALKAIM 354
             ++ +L+ I+
Sbjct: 295 PDLETSLRQIL 305

Synechocystis sp. (strain PCC 6803 / Kazusa) (taxid: 1111708)

>sp|P77775|YFCH_ECOLI Epimerase family protein YfcH OS=Escherichia coli (strain K12) GN=yfcH PE=3 SV=1

 Score =  223 bits (568), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 125/306 (40%), Positives = 182/306 (59%), Gaps = 12/306 (3%)

Query: 51  MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQW 110
           M + +TG TG IGR L+ RL    HQ+ V+TR+  KA  +  G +   + G  +A++   
Sbjct: 1   MNIVITGGTGLIGRHLIPRLLELGHQITVVTRNPQKASSVL-GPRVTLWQG--LADQSN- 56

Query: 111 RDCIQGSTAVVNLAGTPIGT-RWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVS 169
              + G  AV+NLAG PI   RW+ E K+ + +SR  +T K+VDLIN S     PSVL+S
Sbjct: 57  ---LNGVDAVINLAGEPIADKRWTHEQKERLCQSRWNITQKLVDLINAS--DTPPSVLIS 111

Query: 170 ATALGYYGTSETEVFDESSPSGNDYLAEVCREWEGTALKVNKD-VRLALIRIGIVLGKDG 228
            +A GYYG     V  E  P  N++  ++C  WE  A +   D  R+ L+R G+VL  DG
Sbjct: 112 GSATGYYGDLGEVVVTEEEPPHNEFTHKLCARWEEIACRAQSDKTRVCLLRTGVVLAPDG 171

Query: 229 GALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRGVINGTAPNPVRL 288
           G L KM+P F +  GGP+GSG+Q+ +WIH+DD+VN I   L N   RG  N  +P PVR 
Sbjct: 172 GILGKMLPPFRLGLGGPIGSGRQYLAWIHIDDMVNGILWLLDN-ELRGPFNMVSPYPVRN 230

Query: 289 AEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPFKYRYVKD 348
            +    LG+ L RP+ L VP  A++ ++GE + +VL GQR +P R +E GF F++  +++
Sbjct: 231 EQFAHALGHALHRPAILRVPATAIRLLMGESSVLVLGGQRALPKRLEEAGFAFRWYDLEE 290

Query: 349 ALKAIM 354
           AL  ++
Sbjct: 291 ALADVV 296

Escherichia coli (strain K12) (taxid: 83333)

>sp|O31574|YFHF_BACSU Epimerase family protein YfhF OS=Bacillus subtilis (strain 168) GN=yfhF PE=3 SV=1

 Score =  187 bits (474), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 108/307 (35%), Positives = 164/307 (53%), Gaps = 11/307 (3%)

Query: 51  MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQW 110
           M +++TG TGF+G+ L   L    H V +L+R+  + E     K   +   +     P+ 
Sbjct: 1   MNIAMTGGTGFLGQHLTGVLTRQGHHVYILSRNARETE----QKNMTYVQWLSEGAAPE- 55

Query: 111 RDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSA 170
              +      +NLAG  I  RW+ + K+ I  SRI  T +V  LI +  E  +P  L+ A
Sbjct: 56  -QELPHIDVWINLAGKSIFGRWTEKTKQHILSSRINATREVQRLIQKQKE--KPKTLIQA 112

Query: 171 TALGYYGTSETEVFDE-SSPSGNDYLAEVCREWEGTALKVNK-DVRLALIRIGIVLGKDG 228
           +A+G YGTS  + F E S+ S  D+L+     WE     +    +R    R G++LG+ G
Sbjct: 113 SAVGIYGTSLEKTFTEDSATSDEDFLSHTAHLWEKEGQHIEAMGIRTVYARFGVMLGEKG 172

Query: 229 GALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRGVINGTAPNPVRL 288
            AL  MI  +   AGG +G+G+QW SWIH++D   +I  A+ N    G +N TAPNPV +
Sbjct: 173 -ALPLMILPYKFLAGGTIGTGRQWLSWIHVEDAAQMIRYAVENAGISGPMNVTAPNPVDM 231

Query: 289 AEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPFKYRYVKD 348
            +    +  V  RP WLPVPEF L   LGE + ++++GQR +P +A   GF F Y  ++ 
Sbjct: 232 KQFGKTIARVKHRPHWLPVPEFFLSKALGEMSLLIVKGQRALPKKAITSGFRFTYSDLEF 291

Query: 349 ALKAIMS 355
           AL  +++
Sbjct: 292 ALSQLIA 298

Bacillus subtilis (strain 168) (taxid: 224308)

>sp|P71373|Y1208_HAEIN Epimerase family protein HI_1208 OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=HI_1208 PE=3 SV=1

 Score =  181 bits (459), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 110/306 (35%), Positives = 170/306 (55%), Gaps = 17/306 (5%)

Query: 51  MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQW 110
           M + +TG TG IG+ LV+RL   N QV +LTRS S   L    K  +F   +      + 
Sbjct: 1   MNILLTGGTGLIGKALVERLCLRNEQVTILTRSSSPHTLS-KHKNIKFITALSQLNSQEQ 59

Query: 111 RDCIQGSTAVVNLAGTPIGTR-WSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVS 169
            D      A++NLAG PI  + WS   K  ++ESR+ +T+++V+ IN+  +     + +S
Sbjct: 60  FD------AIINLAGEPIFHKVWSKNQKSILRESRLSLTTQLVEFINQYQQH---PIFIS 110

Query: 170 ATALGYYGTSETEVFDESSPSGNDYLAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGG 229
            +A G YG  + +   E+S +   + A++C++WE  A + N   R+ LIR G+V    GG
Sbjct: 111 GSATGIYGDQDEQKITETSKTAKTFTAQLCQDWENIAQQANG--RVCLIRTGMVFSTKGG 168

Query: 230 ALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRGVINGTAPNPVRLA 289
           ALAK++P +    GG LG G+Q+F WI L+D+VN I   L +   RG  N  AP  ++  
Sbjct: 169 ALAKILPFYKWGLGGKLGKGEQYFPWIALEDMVNGILFLLDHSECRGAFNFAAPKSIKQH 228

Query: 290 EMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPFKY----RY 345
           +    L  +L RP++  +P++ L  +LGE A ++LE Q VVP +    GF F+Y     Y
Sbjct: 229 KFNRTLAQLLKRPAFATIPKWLLHFILGERANLLLESQNVVPEKLLNAGFQFQYADCENY 288

Query: 346 VKDALK 351
           ++D LK
Sbjct: 289 LEDILK 294

Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) (taxid: 71421)

>sp|Q5M8N4|D39U1_MOUSE Epimerase family protein SDR39U1 OS=Mus musculus GN=Sdr39u1 PE=1 SV=1

 Score =  181 bits (459), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 108/314 (34%), Positives = 168/314 (53%), Gaps = 30/314 (9%)

Query: 51  MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQW 110
           M V V G TGFIG  + Q L+   H+V++++R         PG+ T             W
Sbjct: 1   MRVLVGGGTGFIGTAVTQLLRGRGHEVKLVSRQPG------PGRIT-------------W 41

Query: 111 RDCIQGS----TAVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINESPEGVR 163
            +  +        V+NLAG  I     RW+   +KE+  SR+  T  +   I E+     
Sbjct: 42  SELSESGLPLCDVVINLAGENILNPLRRWNETFQKEVLTSRLDTTHLLAKAITETAH--P 99

Query: 164 PSVLVSATALGYYGTSETEVFDESSPSGN-DYLAEVCREWEGTALKVNKDVRLALIRIGI 222
           P   +  T + YY  S T+ +DE SP GN D+ + +  +WE  A    +  R  ++R G+
Sbjct: 100 PQAWILVTGVAYYQPSLTKEYDEDSPGGNFDFFSNLVTKWEAAARLPGESTRQVVVRSGV 159

Query: 223 VLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRGVINGTA 282
           VLG+ GGA++ M+  F +  GGP+GSG+Q+F WIH+ D+  ++  AL     +GV+NG A
Sbjct: 160 VLGRGGGAISHMLLPFRLGLGGPIGSGRQFFPWIHIGDLAGILNYALEANHVQGVLNGVA 219

Query: 283 P-NPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPF 341
           P +    AE    LG  LGRP+++PVP   ++AV GE A ++LEGQ+VVP R    G+ +
Sbjct: 220 PASTTTNAEFAQALGAALGRPAFIPVPSTVVRAVFGERAIMLLEGQKVVPRRTLATGYQY 279

Query: 342 KYRYVKDALKAIMS 355
            +  ++ ALK +++
Sbjct: 280 SFPELRAALKDVVA 293

Mus musculus (taxid: 10090)

>sp|O32960|Y860_MYCLE Epimerase family protein ML0860 OS=Mycobacterium leprae (strain TN) GN=ML0860 PE=3 SV=1

 Score =  179 bits (455), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 109/310 (35%), Positives = 172/310 (55%), Gaps = 18/310 (5%)

Query: 46  QKASQMTVSVTGATGFIGRRLVQRLQADNHQV-RVLTRSRSKAELIFPGKKTRFFPGVMI 104
           Q + +  V++ G++G IG  L   L+A++H V R++ R+ + AE +    ++  F     
Sbjct: 3   QASRKAVVAIAGSSGMIGSALAAALRANDHLVLRIVRRTPANAEELHWNPESGEFD---- 58

Query: 105 AEEPQWRDCIQGSTAVVNLAGTPIGTR-WSSEIKKEIKESRIRVTSKVVDLINESPEGVR 163
                  D I    AVVNL G  +G R WS   K+ +++SRI  T  +   + E+  GV+
Sbjct: 59  ------TDAITDVDAVVNLCGVNLGQRRWSGSFKQNLRDSRITPTEVLSAAVAEA--GVK 110

Query: 164 PSVLVSATALGYYGTSETEVFDESSPSGNDYLAEVCREWEGTALKVN-KDVRLALIRIGI 222
               ++A+A+GYYG +   V DE+  +G  +LA++C++WEG  L       R+ L R G+
Sbjct: 111 --TFINASAVGYYGNTRDRVVDENDRAGTGFLAQLCQDWEGATLPAQYAGTRVILARTGM 168

Query: 223 VLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRGVINGTA 282
           VL ++ G L++M PLF    G  +G+G+Q+ SWI L+D V  +  A+S+ S  G +N T 
Sbjct: 169 VLAQEAGVLSRMRPLFSFALGARIGNGRQYMSWISLEDEVRALLFAISHQSLSGPLNLTG 228

Query: 283 PNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFV-VLEGQRVVPARAKELGFPF 341
           P PV  AE     G  + RP+ L +P FA++A LGE A   +L GQR +PA  +  GF F
Sbjct: 229 PAPVTNAEFTTAFGRAINRPTPLMLPSFAVRAALGEFADEGLLIGQRAIPAALERAGFQF 288

Query: 342 KYRYVKDALK 351
            +  + +AL 
Sbjct: 289 HHNTIGEALS 298

Mycobacterium leprae (taxid: 1769)

>sp|Q17QH8|D39U1_BOVIN Epimerase family protein SDR39U1 OS=Bos taurus GN=SDR39U1 PE=2 SV=1

 Score =  178 bits (452), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 108/311 (34%), Positives = 164/311 (52%), Gaps = 23/311 (7%)

Query: 51  MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQW 110
           M V V G TGFIG  L Q L+A  H+V +++R      + +    T   P          
Sbjct: 1   MRVLVGGGTGFIGTALTQLLKARGHEVTLISRKPGPDRITWDDLTTSGLP---------- 50

Query: 111 RDCIQGSTAVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVL 167
             C     A VNLAG  I     RW++  +KE+  SR+  T  +   I ++P+   P   
Sbjct: 51  -RC----DAAVNLAGENILNPLRRWNAAFQKEVLSSRLETTQTLARAIAKAPQ--PPQAW 103

Query: 168 VSATALGYYGTSETEVFDESSPSGN-DYLAEVCREWEGTALKVNKDVRLALIRIGIVLGK 226
           V  T + YY  S T  +DE SP G+ D+ + +  +WE  A       R  ++R G+VLG+
Sbjct: 104 VLVTGVAYYQPSLTAEYDEDSPGGDFDFFSNLVTKWEAAARLPGDSTRQVVVRSGVVLGR 163

Query: 227 DGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRGVINGTAP-NP 285
            GGA+  M+  F +  GGP+GSG Q+F WIH+ D+  ++  AL     +G++NG AP + 
Sbjct: 164 GGGAIGHMLLPFRLGLGGPIGSGHQFFPWIHIRDLAGILAHALETSHVQGILNGVAPASS 223

Query: 286 VRLAEMCDHLGNVLGRPSWLPVPEFALKAVLG-EGAFVVLEGQRVVPARAKELGFPFKYR 344
              AE    LG  LGRP+++P+P   ++AV G E A ++LEGQ+VVP R    G+ + + 
Sbjct: 224 TTNAEFARALGTALGRPAFIPLPSAVVQAVFGRERAVMLLEGQKVVPRRTLAAGYRYSFP 283

Query: 345 YVKDALKAIMS 355
            +  ALK +++
Sbjct: 284 ELGAALKEVIA 294

Bos taurus (taxid: 9913)

>sp|Q4L4J7|Y2119_STAHJ Epimerase family protein SH2119 OS=Staphylococcus haemolyticus (strain JCSC1435) GN=SH2119 PE=3 SV=1

 Score =  173 bits (439), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 103/305 (33%), Positives = 158/305 (51%), Gaps = 16/305 (5%)

Query: 55  VTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAE--EPQWRD 112
           +TG TG +G +LV +L+  +  + +LTRS  +++           P +      +  W  
Sbjct: 6   ITGGTGMVGSQLVNKLKNRDVHITILTRSDKQSDD----------PKISYVNWSKDGWMS 55

Query: 113 CIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATA 172
            +     VVNLAG  +  RW+   K+ I  SRI+ T  +VDL ++     +P VL +A+A
Sbjct: 56  QVPDIDVVVNLAGATLNKRWTPSYKQLIMTSRIQSTQSLVDLFSQREH--KPEVLFNASA 113

Query: 173 LGYYGTSETEVFDESSPSGN-DYLAEVCREWEGTALKVNK-DVRLALIRIGIVLGKDGGA 230
           +GYY  S    + E   +   D+L++V  +WE  A +      R+ L R  ++L  DGGA
Sbjct: 114 MGYYPPSLYHTYTEKYQTHPFDFLSDVVYQWERFAKRFESFGTRVVLGRFSMILSNDGGA 173

Query: 231 LAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRGVINGTAPNPVRLAE 290
           L  M   +  F GG LGSG QW+SWIH++D+V  I   + NP+ +G  N  AP   R   
Sbjct: 174 LQTMKLPYKFFVGGKLGSGFQWYSWIHINDLVRAILFTIDNPNAKGPFNMAAPIAERQNL 233

Query: 291 MCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPFKYRYVKDAL 350
               L  V+ RP    VP F ++  LGE + VVL+ Q+V+P +   LGF F Y  +K A 
Sbjct: 234 FGYTLARVMHRPHETWVPSFLMRLALGEMSTVVLDTQKVLPNKLDALGFTFNYSNLKIAF 293

Query: 351 KAIMS 355
           + ++ 
Sbjct: 294 EDLID 298

Staphylococcus haemolyticus (strain JCSC1435) (taxid: 279808)

>sp|Q8CPY7|Y553_STAES Epimerase family protein SE_0553 OS=Staphylococcus epidermidis (strain ATCC 12228) GN=SE_0553 PE=3 SV=1

 Score =  171 bits (432), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 104/307 (33%), Positives = 167/307 (54%), Gaps = 22/307 (7%)

Query: 55  VTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAE--EPQWRD 112
           +TG TG +G  LV  ++  +  + +LTR            KT   P +      +  W+ 
Sbjct: 6   ITGGTGMVGSHLVNEIKQTDAHITILTRQ----------DKTSNHPKITYINWSKEGWQH 55

Query: 113 CIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATA 172
            +     V+NLAG  +  RW+S  K+ +  SRI+ T  + +L  E+ E  +P VL +A+A
Sbjct: 56  QVPDIDIVINLAGATLNKRWTSSHKQAMMLSRIQSTQTLFELF-ETREH-KPEVLFNASA 113

Query: 173 LGYYG----TSETEVFDESSPSGNDYLAEVCREWEGTALKVNK-DVRLALIRIGIVLGKD 227
           +GYY     TS TE++  + P   D+L+E+  +WE  A K  +   R+ L R G++L  D
Sbjct: 114 MGYYPPDLFTSYTELY-RTLPF--DFLSEIVYQWERFANKFKQFGTRVVLGRFGLILSDD 170

Query: 228 GGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRGVINGTAPNPVR 287
           GGAL  M   + ++ GG LGSG+QW+SWIH+DD++  I   +++ +  G  N TAP P R
Sbjct: 171 GGALEMMELPYRLYVGGKLGSGRQWYSWIHIDDLIRGILFTINHDNAEGPFNLTAPIPER 230

Query: 288 LAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPFKYRYVK 347
                  L   + +P     P+  L+AVLG+ + V+L+ Q+V+P +   LGF FKY  ++
Sbjct: 231 QNLFGYTLARAMHKPHETWAPKLILRAVLGQMSTVILDTQKVLPNKLHALGFEFKYNNLR 290

Query: 348 DALKAIM 354
           +AL  ++
Sbjct: 291 NALDDLI 297

Staphylococcus epidermidis (strain ATCC 12228) (taxid: 176280)

>sp|Q5HQV8|Y438_STAEQ Epimerase family protein SERP0438 OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=SERP0438 PE=3 SV=1

 Score =  171 bits (432), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 104/307 (33%), Positives = 167/307 (54%), Gaps = 22/307 (7%)

Query: 55  VTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAE--EPQWRD 112
           +TG TG +G  LV  ++  +  + +LTR            KT   P +      +  W+ 
Sbjct: 6   ITGGTGMVGSHLVNEIKQTDAHITILTRQ----------DKTSNHPKITYINWSKEGWQH 55

Query: 113 CIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATA 172
            +     V+NLAG  +  RW+S  K+ +  SRI+ T  + +L  E+ E  +P VL +A+A
Sbjct: 56  QVPDIDIVINLAGATLNKRWTSSHKQAMMLSRIQSTQTLFELF-ETREH-KPEVLFNASA 113

Query: 173 LGYYG----TSETEVFDESSPSGNDYLAEVCREWEGTALKVNK-DVRLALIRIGIVLGKD 227
           +GYY     TS TE++  + P   D+L+E+  +WE  A K  +   R+ L R G++L  D
Sbjct: 114 MGYYPPDLFTSYTELY-RTLPF--DFLSEIVYQWERFANKFKQFGTRVVLGRFGLILSDD 170

Query: 228 GGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRGVINGTAPNPVR 287
           GGAL  M   + ++ GG LGSG+QW+SWIH+DD++  I   +++ +  G  N TAP P R
Sbjct: 171 GGALEMMELPYRLYVGGKLGSGRQWYSWIHIDDLIRGILFTINHDNAEGPFNLTAPIPER 230

Query: 288 LAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPFKYRYVK 347
                  L   + +P     P+  L+AVLG+ + V+L+ Q+V+P +   LGF FKY  ++
Sbjct: 231 QNLFGYTLARAMHKPHETWAPKLILRAVLGQMSTVILDTQKVLPNKLHALGFEFKYNNLR 290

Query: 348 DALKAIM 354
           +AL  ++
Sbjct: 291 NALDDLI 297

Staphylococcus epidermidis (strain ATCC 35984 / RP62A) (taxid: 176279)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	355
255543879	351	conserved hypothetical protein [Ricinus	0.974	0.985	0.794	1e-160
357473587	350	hypothetical protein MTR_4g072040 [Medic	0.980	0.994	0.772	1e-159
224105291	350	predicted protein [Populus trichocarpa]	0.957	0.971	0.801	1e-158
356545053	349	PREDICTED: epimerase family protein slr1	0.977	0.994	0.757	1e-155
225427778	357	PREDICTED: epimerase family protein slr1	0.974	0.969	0.758	1e-154
363808106	350	uncharacterized protein LOC100813590 [Gl	0.980	0.994	0.740	1e-152
297824979	350	hypothetical protein ARALYDRAFT_900542 [	0.895	0.908	0.794	1e-151
18399648	347	Rossmann-fold NAD(P)-binding domain-cont	0.909	0.930	0.790	1e-150
388519265	349	unknown [Lotus japonicus]	0.969	0.985	0.741	1e-150
449461621	348	PREDICTED: epimerase family protein slr1	0.960	0.979	0.742	1e-148

>gi|255543879|ref|XP_002513002.1| conserved hypothetical protein [Ricinus communis] gi|223548013|gb|EEF49505.1| conserved hypothetical protein [Ricinus communis]

 Score =  570 bits (1469), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 278/350 (79%), Positives = 311/350 (88%), Gaps = 4/350 (1%)

Query: 6   CRAST-LTWSQSISPCLHSSAKPFSRCEAKKFRVFCTSDHTQKASQMTVSVTGATGFIGR 64
           CRA+T LTW++SISP      + FSR + ++  V   SD T K +QMTVSVTGATGFIGR
Sbjct: 5   CRATTALTWTRSISPPSLHIPQSFSRYDTRRLSVCGASDQTPKENQMTVSVTGATGFIGR 64

Query: 65  RLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLA 124
           RLVQRL ADNH + VLTRS+SKA+LIFPGK    FP ++IAEEP+W++ IQGS AVVNLA
Sbjct: 65  RLVQRLHADNHNIHVLTRSKSKAQLIFPGKD---FPRIVIAEEPEWKNSIQGSDAVVNLA 121

Query: 125 GTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVF 184
           G PI TRWSSEIKKEIK+SRIRVTSKVVDLIN+SPEGVRP+VLVSATA+GYYG+SET VF
Sbjct: 122 GMPISTRWSSEIKKEIKQSRIRVTSKVVDLINDSPEGVRPTVLVSATAVGYYGSSETRVF 181

Query: 185 DESSPSGNDYLAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGG 244
           DESSPSGNDYLA VCREWEGTALKVNKDVRLALIRIG+VLGK+GGALAKMIPLFMMFAGG
Sbjct: 182 DESSPSGNDYLAGVCREWEGTALKVNKDVRLALIRIGVVLGKNGGALAKMIPLFMMFAGG 241

Query: 245 PLGSGQQWFSWIHLDDIVNLIYEALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSW 304
           PLGSG+QWFSWIHL+DIVNLIYEAL NPSY+GVINGTAPNPVRLAEMC+ LGNVLGRPSW
Sbjct: 242 PLGSGRQWFSWIHLEDIVNLIYEALINPSYKGVINGTAPNPVRLAEMCEQLGNVLGRPSW 301

Query: 305 LPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPFKYRYVKDALKAIM 354
           LPVP+FALKAVLGEGA VVL+GQ+V+P +AKELGF FKY YVKDALK I+
Sbjct: 302 LPVPDFALKAVLGEGASVVLDGQKVLPTKAKELGFQFKYPYVKDALKTIL 351

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357473587|ref|XP_003607078.1| hypothetical protein MTR_4g072040 [Medicago truncatula] gi|355508133|gb|AES89275.1| hypothetical protein MTR_4g072040 [Medicago truncatula]

 Score =  565 bits (1457), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 271/351 (77%), Positives = 304/351 (86%), Gaps = 3/351 (0%)

Query: 5   LCRASTLTWSQSISPCLHSSAKPFSRCEAKKFRVFCTSDHTQKASQMTVSVTGATGFIGR 64
           + RA+ LTWS ++SP LH         E +KFRV+C +D + K  QM +SVTGATGFIG+
Sbjct: 3   ISRATALTWSHTVSPSLHLPQPLLFTRETRKFRVWCGTDQSSKGDQMIISVTGATGFIGK 62

Query: 65  RLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLA 124
           RLVQ+LQA+NH+V VLTRS+SKAELIFP K    FPGV IA EP+W+DCIQGST VVNLA
Sbjct: 63  RLVQKLQAENHRVHVLTRSKSKAELIFPVKD---FPGVKIAGEPEWKDCIQGSTGVVNLA 119

Query: 125 GTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVF 184
           G PI TRWSSEIKKEIK+SR+RVTSKVVDLI  +P+  RP VLVSATA+GYYGTSET+VF
Sbjct: 120 GLPISTRWSSEIKKEIKQSRVRVTSKVVDLIKRAPDETRPQVLVSATAVGYYGTSETQVF 179

Query: 185 DESSPSGNDYLAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGG 244
           DE SPSG DYLAEVCREWE TALK N DVR+ALIRIG+VLGKDGGALAKMIPLFMMFAGG
Sbjct: 180 DEQSPSGKDYLAEVCREWESTALKANGDVRVALIRIGVVLGKDGGALAKMIPLFMMFAGG 239

Query: 245 PLGSGQQWFSWIHLDDIVNLIYEALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSW 304
           PLGSG QWFSWIHLDDIVNLIYEALSNPSY+GVINGTAPNPVRL+E+C+ LGNVLGRPSW
Sbjct: 240 PLGSGNQWFSWIHLDDIVNLIYEALSNPSYKGVINGTAPNPVRLSELCEQLGNVLGRPSW 299

Query: 305 LPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPFKYRYVKDALKAIMS 355
           LPVP+FALKAVLGEGA VVLEGQ+VVP +AK+LGF FKY YVKDALKAI+S
Sbjct: 300 LPVPDFALKAVLGEGATVVLEGQKVVPTQAKKLGFSFKYSYVKDALKAIIS 350

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224105291|ref|XP_002313756.1| predicted protein [Populus trichocarpa] gi|222850164|gb|EEE87711.1| predicted protein [Populus trichocarpa]

 Score =  565 bits (1455), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 279/348 (80%), Positives = 306/348 (87%), Gaps = 8/348 (2%)

Query: 9   STLTWSQSISPCLHSSAKPFS-RCEAKKFRVFCTSDHTQKASQMTVSVTGATGFIGRRLV 67
           +TLTWS SIS       + FS RC  K+ RV C SD TQK   MTVSVTGATGFIG+RLV
Sbjct: 10  TTLTWSNSISTSSLQIPQVFSIRC-TKRLRVCCASDQTQK---MTVSVTGATGFIGKRLV 65

Query: 68  QRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTP 127
           QRL AD H VRVLTRSRSKA+LIFP K+   FPG++IAEE  W+DCIQGS AVVNLAG P
Sbjct: 66  QRLHADKHSVRVLTRSRSKAQLIFPVKE---FPGILIAEERDWKDCIQGSNAVVNLAGLP 122

Query: 128 IGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDES 187
           I TRWS E+KKEIK+SRI+VTSKVVDLIN SPEGVRP+VLVSATA+GYYG+SET+VFDE 
Sbjct: 123 ISTRWSPEVKKEIKQSRIKVTSKVVDLINGSPEGVRPAVLVSATAVGYYGSSETQVFDER 182

Query: 188 SPSGNDYLAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLG 247
           SPSGNDYLAEVCREWE TALKVNKDVRLALIRIG+VLGKDGGALAKMIPLFM+FAGGP+G
Sbjct: 183 SPSGNDYLAEVCREWEATALKVNKDVRLALIRIGVVLGKDGGALAKMIPLFMLFAGGPMG 242

Query: 248 SGQQWFSWIHLDDIVNLIYEALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPV 307
           SGQQWFSWIHLDDIVNLIYEAL+NPSY+GVINGTAPNPVRLAEMC+ LGNV+GRPSWLPV
Sbjct: 243 SGQQWFSWIHLDDIVNLIYEALTNPSYKGVINGTAPNPVRLAEMCEQLGNVMGRPSWLPV 302

Query: 308 PEFALKAVLGEGAFVVLEGQRVVPARAKELGFPFKYRYVKDALKAIMS 355
           P+FALKAVLGEGA VVL+GQRV+P RAKELGF FKY  VKDALK I+S
Sbjct: 303 PDFALKAVLGEGASVVLDGQRVLPTRAKELGFQFKYPQVKDALKTILS 350

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356545053|ref|XP_003540960.1| PREDICTED: epimerase family protein slr1223-like [Glycine max]

 Score =  552 bits (1423), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 266/351 (75%), Positives = 301/351 (85%), Gaps = 4/351 (1%)

Query: 5   LCRASTLTWSQSISPCLHSSAKPFSRCEAKKFRVFCTSDHTQKASQMTVSVTGATGFIGR 64
           +C A+ LTWS +I P LH      +R EA+ F V+C SD   K ++M +SVTGATGFIGR
Sbjct: 3   MCGATALTWSHTICPSLHLPRSVSTR-EARSFCVWCVSDQDPKGNKMIISVTGATGFIGR 61

Query: 65  RLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLA 124
           RLVQRL ADNH V VLTRS+SKAE IFP K    FPG+ IAEEP+W+D +QGST VVNLA
Sbjct: 62  RLVQRLHADNHSVHVLTRSKSKAETIFPAKD---FPGIKIAEEPEWKDSVQGSTGVVNLA 118

Query: 125 GTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVF 184
           G PI TRWS EIKKEIK+SRIRVTSKV +LIN +P+ +RP V VSATA+GYYGTSET+VF
Sbjct: 119 GLPISTRWSPEIKKEIKQSRIRVTSKVAELINSAPDDIRPKVFVSATAVGYYGTSETQVF 178

Query: 185 DESSPSGNDYLAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGG 244
           DE SPSG DYLAEVCREWE TALKVN DVR+ALIRIG+VLGKDGGAL KMIP+F +FAGG
Sbjct: 179 DEQSPSGKDYLAEVCREWESTALKVNGDVRVALIRIGVVLGKDGGALVKMIPIFNLFAGG 238

Query: 245 PLGSGQQWFSWIHLDDIVNLIYEALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSW 304
           PLGSG+QWFSWIHL+DIVNLIYEALSNPSY+GVINGTAPNPVRLAE+CD LGNVLGRPSW
Sbjct: 239 PLGSGKQWFSWIHLEDIVNLIYEALSNPSYKGVINGTAPNPVRLAELCDQLGNVLGRPSW 298

Query: 305 LPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPFKYRYVKDALKAIMS 355
           LPVP+FALKAVLGEGA VVLEGQRV+P +AK+LGFPFKY YVKDAL+AI+S
Sbjct: 299 LPVPDFALKAVLGEGATVVLEGQRVLPIQAKKLGFPFKYPYVKDALQAILS 349

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225427778|ref|XP_002268617.1| PREDICTED: epimerase family protein slr1223 [Vitis vinifera] gi|297744722|emb|CBI37984.3| unnamed protein product [Vitis vinifera]

 Score =  552 bits (1422), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 270/356 (75%), Positives = 302/356 (84%), Gaps = 10/356 (2%)

Query: 5   LCRAST-LTWSQSISPCLHSSAKPFSRCEAKKFRVFCT-----SDHTQKASQMTVSVTGA 58
           LCR +   +W+ SISP LH   + FS CE+K  RV C      S  +QK +QM VSVTGA
Sbjct: 3   LCRTTAAFSWAHSISPSLHFPQR-FSMCESKGLRVCCAVNASASGQSQKENQMIVSVTGA 61

Query: 59  TGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGST 118
           TGFIGRRLVQRL ADNH+V VLTRSRSKA+ IFP K    F G++IAEEP+W+DCIQGS 
Sbjct: 62  TGFIGRRLVQRLLADNHRVHVLTRSRSKAQFIFPAKD---FRGIVIAEEPEWKDCIQGSN 118

Query: 119 AVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGT 178
           AVVNLAG PI TRWS EIKKEIKESR+R+TSKVVD+IN S + VRP+VLVSA+A+GYYG 
Sbjct: 119 AVVNLAGMPISTRWSPEIKKEIKESRVRITSKVVDIINNSQDEVRPTVLVSASAIGYYGA 178

Query: 179 SETEVFDESSPSGNDYLAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLF 238
           SET VF E SPSGNDYLAEVCREWEG A KVNKDVRL LIRIG+VLGKDGGALAKMIPLF
Sbjct: 179 SETLVFKEQSPSGNDYLAEVCREWEGKAFKVNKDVRLVLIRIGVVLGKDGGALAKMIPLF 238

Query: 239 MMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRGVINGTAPNPVRLAEMCDHLGNV 298
            +FAGGPLGSG+QWFSWIHLDDIV LIYEALSNPSY GVINGTAPNPVRLAEMCDHLGN 
Sbjct: 239 NLFAGGPLGSGKQWFSWIHLDDIVELIYEALSNPSYTGVINGTAPNPVRLAEMCDHLGNA 298

Query: 299 LGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPFKYRYVKDALKAIM 354
           +GRPSWLPVP+FALKAVLGEGA VVL+GQ+V+PARA++LGF FKY YVKDAL+AI+
Sbjct: 299 MGRPSWLPVPDFALKAVLGEGASVVLDGQKVLPARAQQLGFTFKYPYVKDALRAIL 354

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|363808106|ref|NP_001241963.1| uncharacterized protein LOC100813590 [Glycine max] gi|255639021|gb|ACU19811.1| unknown [Glycine max]

 Score =  544 bits (1402), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 260/351 (74%), Positives = 295/351 (84%), Gaps = 3/351 (0%)

Query: 5   LCRASTLTWSQSISPCLHSSAKPFSRCEAKKFRVFCTSDHTQKASQMTVSVTGATGFIGR 64
           +C A+ LTWS +I P LH      +R   + F V+C SD   K ++M +SVTGATGFIGR
Sbjct: 3   MCGATALTWSHTICPSLHLPRSVSTREARRSFSVWCVSDQDPKGNKMIISVTGATGFIGR 62

Query: 65  RLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLA 124
           RLVQRL ADNH V VLTRS+S AE IFP K    FPG+ IAEEP+W+D IQGST VVNLA
Sbjct: 63  RLVQRLHADNHSVHVLTRSKSNAETIFPAKD---FPGIKIAEEPEWKDSIQGSTGVVNLA 119

Query: 125 GTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVF 184
           G PI TRWS EIKKEIK+SRIRVTSKVV+LIN +P+ +RP V VSATA+GYY TSET+VF
Sbjct: 120 GLPISTRWSPEIKKEIKQSRIRVTSKVVELINSAPDDIRPKVFVSATAVGYYSTSETQVF 179

Query: 185 DESSPSGNDYLAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGG 244
           DE SPSG DYLAEVCREWE TALKVN  VR+ALIRIG+VLGKDGGALAKMIP+F +FAGG
Sbjct: 180 DEQSPSGKDYLAEVCREWESTALKVNGGVRVALIRIGVVLGKDGGALAKMIPMFKLFAGG 239

Query: 245 PLGSGQQWFSWIHLDDIVNLIYEALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSW 304
           PLGSG QWFSWIHL+DIVNLIYE LSNPSY+GVINGTAPNPVRLAE+CD LG+ LGRPSW
Sbjct: 240 PLGSGTQWFSWIHLEDIVNLIYETLSNPSYKGVINGTAPNPVRLAELCDQLGHALGRPSW 299

Query: 305 LPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPFKYRYVKDALKAIMS 355
           LPVP+FALKAVLGEGA VVLEGQ+V+P +AK+LGFPFKY YVKDAL+AI+S
Sbjct: 300 LPVPDFALKAVLGEGATVVLEGQKVLPTQAKKLGFPFKYSYVKDALQAILS 350

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297824979|ref|XP_002880372.1| hypothetical protein ARALYDRAFT_900542 [Arabidopsis lyrata subsp. lyrata] gi|297326211|gb|EFH56631.1| hypothetical protein ARALYDRAFT_900542 [Arabidopsis lyrata subsp. lyrata]

 Score =  540 bits (1390), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 255/321 (79%), Positives = 288/321 (89%), Gaps = 3/321 (0%)

Query: 34  KKFRVFCTSDHTQKASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG 93
           ++F V C+S+ +QK +QMTVSVTGATGFIGR+LVQRL+ADNH +RVLTRS+SKAE IFP 
Sbjct: 32  RRFMVLCSSEKSQKENQMTVSVTGATGFIGRKLVQRLRADNHSIRVLTRSKSKAEQIFPA 91

Query: 94  KKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVD 153
           K    FPG++IAEE  W++C+QGSTAVVNLAG PI TRWS EIKKEIK+SRIR+TSKVVD
Sbjct: 92  KD---FPGIVIAEESDWKNCVQGSTAVVNLAGLPISTRWSPEIKKEIKDSRIRITSKVVD 148

Query: 154 LINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDYLAEVCREWEGTALKVNKDV 213
           LIN SP   RP+VLVSATA+GYYGTSET VFDE+SPSG DYLAEVCREWEGTALK NKDV
Sbjct: 149 LINNSPAEARPTVLVSATAVGYYGTSETGVFDENSPSGKDYLAEVCREWEGTALKANKDV 208

Query: 214 RLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPS 273
           R+ALIRIG+VLGKDGGALA MIP F MFAGGPLGSGQQWFSWIH+DD+VNLIYEAL+NPS
Sbjct: 209 RVALIRIGVVLGKDGGALAMMIPFFQMFAGGPLGSGQQWFSWIHVDDLVNLIYEALTNPS 268

Query: 274 YRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPAR 333
           Y+GVINGTAPNPVRL EMC  LG+VL RPSWLPVP+FALKA+LGEGA VVLEGQ+V+P R
Sbjct: 269 YQGVINGTAPNPVRLGEMCQQLGSVLSRPSWLPVPDFALKALLGEGATVVLEGQKVLPVR 328

Query: 334 AKELGFPFKYRYVKDALKAIM 354
           AKELGF FKY+YVKDAL+AIM
Sbjct: 329 AKELGFEFKYKYVKDALRAIM 349

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18399648|ref|NP_565505.1| Rossmann-fold NAD(P)-binding domain-containing protein [Arabidopsis thaliana] gi|11692898|gb|AAG40052.1|AF324701_1 At2g21280 [Arabidopsis thaliana] gi|11908096|gb|AAG41477.1|AF326895_1 unknown protein [Arabidopsis thaliana] gi|12642906|gb|AAK00395.1|AF339713_1 unknown protein [Arabidopsis thaliana] gi|20197908|gb|AAD23676.2| expressed protein [Arabidopsis thaliana] gi|23397230|gb|AAN31897.1| unknown protein [Arabidopsis thaliana] gi|34787115|emb|CAD56855.1| SulA protein [Arabidopsis thaliana] gi|330252061|gb|AEC07155.1| Rossmann-fold NAD(P)-binding domain-containing protein [Arabidopsis thaliana]

 Score =  536 bits (1381), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 260/329 (79%), Positives = 289/329 (87%), Gaps = 6/329 (1%)

Query: 26  KPFSRCEAKKFRVFCTSDHTQKASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRS 85
           + FS    ++F V C+S   QK SQMTVSVTGATGFIGRRLVQRL+ADNH +RVLTRS+S
Sbjct: 24  RSFSMPGTRRFMVLCSS---QKESQMTVSVTGATGFIGRRLVQRLRADNHAIRVLTRSKS 80

Query: 86  KAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRI 145
           KAE IFP K    FPG++IAEE +W++C+QGSTAVVNLAG PI TRWS EIKKEIK SRI
Sbjct: 81  KAEQIFPAKD---FPGIVIAEESEWKNCVQGSTAVVNLAGLPISTRWSPEIKKEIKGSRI 137

Query: 146 RVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDYLAEVCREWEGT 205
           RVTSKVVDLIN SP   RP+VLVSATA+GYYGTSET VFDE+SPSG DYLAEVCREWEGT
Sbjct: 138 RVTSKVVDLINNSPAEARPTVLVSATAVGYYGTSETGVFDENSPSGKDYLAEVCREWEGT 197

Query: 206 ALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLI 265
           ALK NKDVR+ALIRIG+VLGKDGGALA MIP F MFAGGPLGSGQQWFSWIH+DD+VNLI
Sbjct: 198 ALKANKDVRVALIRIGVVLGKDGGALAMMIPFFQMFAGGPLGSGQQWFSWIHVDDLVNLI 257

Query: 266 YEALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLE 325
           YEAL+NPSY+GVINGTAPNPVRL EMC  LG+VL RPSWLPVP+FALKA+LGEGA VVLE
Sbjct: 258 YEALTNPSYKGVINGTAPNPVRLGEMCQQLGSVLSRPSWLPVPDFALKALLGEGATVVLE 317

Query: 326 GQRVVPARAKELGFPFKYRYVKDALKAIM 354
           GQ+V+P RAKELGF FKY+YVKDAL+AIM
Sbjct: 318 GQKVLPVRAKELGFEFKYKYVKDALRAIM 346

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388519265|gb|AFK47694.1| unknown [Lotus japonicus]

 Score =  536 bits (1381), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 258/348 (74%), Positives = 297/348 (85%), Gaps = 4/348 (1%)

Query: 8   ASTLTWSQSISPCLHSSAKPFSRCEAKKFRVFCTSDHTQKASQMTVSVTGATGFIGRRLV 67
           A+ LT S ++ P LH   +P S  E + FRV+C+SD +   +QM +SVTGATGFIGRRLV
Sbjct: 6   ATALTSSHTVCPSLHL-LRPLSTREGRSFRVWCSSDQSSMGNQMIISVTGATGFIGRRLV 64

Query: 68  QRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTP 127
           Q+L A+NH V VLTRS+SKAELIFP K    FPG+ IAEE +W++ IQGST VVNLAG P
Sbjct: 65  QKLHAENHGVHVLTRSKSKAELIFPVKD---FPGIKIAEESEWKNSIQGSTGVVNLAGLP 121

Query: 128 IGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDES 187
           I TRWSSEIKKEIK+SRIRVTSKV +LIN +P+ +RP V VSATA+GYYGTSET+VFDE 
Sbjct: 122 ISTRWSSEIKKEIKQSRIRVTSKVAELINSAPDDIRPKVFVSATAVGYYGTSETQVFDEQ 181

Query: 188 SPSGNDYLAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLG 247
           SPSGNDYLAEVCREWE TAL+VN DVR+ALIRIG+VLGK+GGALAKMIPLF MFAGGPLG
Sbjct: 182 SPSGNDYLAEVCREWESTALRVNGDVRVALIRIGVVLGKEGGALAKMIPLFKMFAGGPLG 241

Query: 248 SGQQWFSWIHLDDIVNLIYEALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPV 307
           SG QWFSWIHLDDIV+LIYEAL NPSY+GVINGTAPNPVR AE+C  LG+V+GRPSWLPV
Sbjct: 242 SGNQWFSWIHLDDIVDLIYEALRNPSYKGVINGTAPNPVRFAELCVQLGHVMGRPSWLPV 301

Query: 308 PEFALKAVLGEGAFVVLEGQRVVPARAKELGFPFKYRYVKDALKAIMS 355
           P+ ALKAVLGEGA VVLEGQ+V+P +AK+LGF FKY YVKDALKAI+S
Sbjct: 302 PDIALKAVLGEGAAVVLEGQKVLPTQAKKLGFAFKYSYVKDALKAILS 349

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449461621|ref|XP_004148540.1| PREDICTED: epimerase family protein slr1223-like [Cucumis sativus]

 Score =  531 bits (1368), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 260/350 (74%), Positives = 298/350 (85%), Gaps = 9/350 (2%)

Query: 8   ASTLTWSQSISPCLHSSAKP--FSRCEAKKFRVFCTSDHTQKASQMTVSVTGATGFIGRR 65
           A + +WS+++S   HS   P   + C   +FRVFC  D T+  +Q+TVS+TGATGFIGRR
Sbjct: 6   AISFSWSRTVS---HSLRIPQHLAIC-GNRFRVFCAIDATKMKNQLTVSITGATGFIGRR 61

Query: 66  LVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG 125
           LVQRL AD H +RVLTRS+SKAELIFP ++   FPG+MIAEEP W++CIQGS  VVNLAG
Sbjct: 62  LVQRLHADKHNIRVLTRSKSKAELIFPARE---FPGIMIAEEPGWKNCIQGSDGVVNLAG 118

Query: 126 TPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFD 185
            PI TRWSSEIKKEIK+SRIRVTSKVV LIN++P+  RP+VLVSATA+GYYGTSET  FD
Sbjct: 119 MPISTRWSSEIKKEIKQSRIRVTSKVVSLINDAPDAARPTVLVSATAVGYYGTSETATFD 178

Query: 186 ESSPSGNDYLAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGP 245
           E SPSGNDYLA+VCREWE TAL VNK+VR+ALIRIG+VLGK+GGALAKMIPLFMMFAGGP
Sbjct: 179 ERSPSGNDYLAQVCREWEATALGVNKNVRVALIRIGVVLGKEGGALAKMIPLFMMFAGGP 238

Query: 246 LGSGQQWFSWIHLDDIVNLIYEALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWL 305
           LGSG+QWFSWIHLDDIVNLIYEAL NPSY+GVINGTAPNPV L E+C  LG  +GRPSWL
Sbjct: 239 LGSGKQWFSWIHLDDIVNLIYEALINPSYQGVINGTAPNPVTLGELCKGLGAEMGRPSWL 298

Query: 306 PVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPFKYRYVKDALKAIMS 355
           PVP+FALKAVLGEGA VVLEGQ+VVP RAKELGF +KY  VKDALK+I+S
Sbjct: 299 PVPDFALKAVLGEGASVVLEGQKVVPTRAKELGFSYKYPSVKDALKSILS 348

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	355
TAIR|locus:2050090	347	SULA [Arabidopsis thaliana (ta	0.969	0.991	0.760	2.1e-139
UNIPROTKB|P77775	297	yfcH "conserved protein with N	0.828	0.989	0.408	5.3e-56
UNIPROTKB|Q60BH9	300	MCA0496 "Putative uncharacteri	0.822	0.973	0.394	1.2e-51
UNIPROTKB|Q81YW5	301	BAS0486 "Cell division inhibit	0.830	0.980	0.370	4e-51
TIGR_CMR|BA_0515	301	BA_0515 "cell division inhibit	0.830	0.980	0.370	4e-51
UNIPROTKB|Q8ED48	296	yfcH "Predicted nucleoside-dip	0.828	0.993	0.379	5.8e-50
TIGR_CMR|SO_2922	296	SO_2922 "conserved hypothetica	0.828	0.993	0.379	5.8e-50
UNIPROTKB|Q4K6B2	302	PFL_5142 "Uncharacterized prot	0.822	0.966	0.403	2e-49
UNIPROTKB|Q47V18	296	CPS_4710 "Putative uncharacter	0.822	0.986	0.364	6e-48
TIGR_CMR|CPS_4710	296	CPS_4710 "conserved hypothetic	0.822	0.986	0.364	6e-48

TAIR|locus:2050090 SULA [Arabidopsis thaliana (taxid:3702)]

 Score = 1364 (485.2 bits), Expect = 2.1e-139, P = 2.1e-139
 Identities = 267/351 (76%), Positives = 301/351 (85%)

Query:     4 LLCRASTLTWSQSISPCLHSSAKPFSRCEAKKFRVFCTSDHTQKASQMTVSVTGATGFIG 63
             LLC  ++L+ S ++S  L    + FS    ++F V C+S   QK SQMTVSVTGATGFIG
Sbjct:     3 LLCSPTSLSSSFALSSAL-LVPRSFSMPGTRRFMVLCSS---QKESQMTVSVTGATGFIG 58

Query:    64 RRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNL 123
             RRLVQRL+ADNH +RVLTRS+SKAE IFP K    FPG++IAEE +W++C+QGSTAVVNL
Sbjct:    59 RRLVQRLRADNHAIRVLTRSKSKAEQIFPAKD---FPGIVIAEESEWKNCVQGSTAVVNL 115

Query:   124 AGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEV 183
             AG PI TRWS EIKKEIK SRIRVTSKVVDLIN SP   RP+VLVSATA+GYYGTSET V
Sbjct:   116 AGLPISTRWSPEIKKEIKGSRIRVTSKVVDLINNSPAEARPTVLVSATAVGYYGTSETGV 175

Query:   184 FDESSPSGNDYLAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAG 243
             FDE+SPSG DYLAEVCREWEGTALK NKDVR+ALIRIG+VLGKDGGALA MIP F MFAG
Sbjct:   176 FDENSPSGKDYLAEVCREWEGTALKANKDVRVALIRIGVVLGKDGGALAMMIPFFQMFAG 235

Query:   244 GPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPS 303
             GPLGSGQQWFSWIH+DD+VNLIYEAL+NPSY+GVINGTAPNPVRL EMC  LG+VL RPS
Sbjct:   236 GPLGSGQQWFSWIHVDDLVNLIYEALTNPSYKGVINGTAPNPVRLGEMCQQLGSVLSRPS 295

Query:   304 WLPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPFKYRYVKDALKAIM 354
             WLPVP+FALKA+LGEGA VVLEGQ+V+P RAKELGF FKY+YVKDAL+AIM
Sbjct:   296 WLPVPDFALKALLGEGATVVLEGQKVLPVRAKELGFEFKYKYVKDALRAIM 346

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0009507 "chloroplast" evidence=ISM;IDA

GO:0044237 "cellular metabolic process" evidence=IEA

GO:0050662 "coenzyme binding" evidence=IEA

GO:0009941 "chloroplast envelope" evidence=IDA

GO:0009536 "plastid" evidence=IDA

GO:0010020 "chloroplast fission" evidence=IMP

GO:0006098 "pentose-phosphate shunt" evidence=RCA

GO:0010027 "thylakoid membrane organization" evidence=RCA

GO:0016117 "carotenoid biosynthetic process" evidence=RCA

GO:0019288 "isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway" evidence=RCA

UNIPROTKB|P77775 yfcH "conserved protein with NAD(P)-binding Rossmann-fold domain" [Escherichia coli K-12 (taxid:83333)]

 Score = 577 (208.2 bits), Expect = 5.3e-56, P = 5.3e-56
 Identities = 125/306 (40%), Positives = 182/306 (59%)

Query:    51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQW 110
             M + +TG TG IGR L+ RL    HQ+ V+TR+  KA  +  G +   + G  +A++   
Sbjct:     1 MNIVITGGTGLIGRHLIPRLLELGHQITVVTRNPQKASSVL-GPRVTLWQG--LADQSN- 56

Query:   111 RDCIQGSTAVVNLAGTPIGT-RWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVS 169
                + G  AV+NLAG PI   RW+ E K+ + +SR  +T K+VDLIN S     PSVL+S
Sbjct:    57 ---LNGVDAVINLAGEPIADKRWTHEQKERLCQSRWNITQKLVDLINASD--TPPSVLIS 111

Query:   170 ATALGYYGTSETEVFDESSPSGNDYLAEVCREWEGTALKVNKD-VRLALIRIGIVLGKDG 228
              +A GYYG     V  E  P  N++  ++C  WE  A +   D  R+ L+R G+VL  DG
Sbjct:   112 GSATGYYGDLGEVVVTEEEPPHNEFTHKLCARWEEIACRAQSDKTRVCLLRTGVVLAPDG 171

Query:   229 GALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRGVINGTAPNPVRL 288
             G L KM+P F +  GGP+GSG+Q+ +WIH+DD+VN I   L N   RG  N  +P PVR 
Sbjct:   172 GILGKMLPPFRLGLGGPIGSGRQYLAWIHIDDMVNGILWLLDN-ELRGPFNMVSPYPVRN 230

Query:   289 AEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPFKYRYVKD 348
              +    LG+ L RP+ L VP  A++ ++GE + +VL GQR +P R +E GF F++  +++
Sbjct:   231 EQFAHALGHALHRPAILRVPATAIRLLMGESSVLVLGGQRALPKRLEEAGFAFRWYDLEE 290

Query:   349 ALKAIM 354
             AL  ++
Sbjct:   291 ALADVV 296

GO:0050662 "coenzyme binding" evidence=IEA

GO:0044237 "cellular metabolic process" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

UNIPROTKB|Q60BH9 MCA0496 "Putative uncharacterized protein" [Methylococcus capsulatus str. Bath (taxid:243233)]

 Score = 536 (193.7 bits), Expect = 1.2e-51, P = 1.2e-51
 Identities = 120/304 (39%), Positives = 174/304 (57%)

Query:    51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAE-EPQ 109
             M + VTG TGFIGR L +RL    H++ VL+R          G+     P   I    PQ
Sbjct:     1 MHLLVTGGTGFIGRSLCRRLLERGHRLTVLSRQAPDTVRRLCGETV--MPVAAIDSLSPQ 58

Query:   110 WRDCIQGSTAVVNLAGTPIGT-RWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLV 168
                   G  AVVNLAG PI   RW+   K+ + ESR+ +T+ +VD I  +    +P VL+
Sbjct:    59 -----AGFDAVVNLAGEPIADKRWTEARKRLLWESRVGLTTALVDYIARAES--KPPVLI 111

Query:   169 SATALGYYGTSETEVFDESSPSGNDYLAEVCREWEGTALKV-NKDVRLALIRIGIVLGKD 227
             S +A+GYYG     + DE S  G+ +   +C  WE  A +     VR+ ++R G+V+G++
Sbjct:   112 SGSAVGYYGNRGDTLLDEESAHGDGFGHRLCAAWEEAASRAAGHGVRVCMLRTGLVVGRN 171

Query:   228 GGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRGVINGTAPNPVR 287
             GG L +M+PLF +  GG +G G+QW SWIHLDD + +    + +    G  N TAPNPV 
Sbjct:   172 GGFLQRMLPLFRLGLGGRIGEGRQWMSWIHLDDHIAITEYLIEDAHLEGAFNATAPNPVT 231

Query:   288 LAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPFKYRYVK 347
               E  + L  +L RP+ LPVP F L+  LGE A ++L GQRV+P R ++  F F+Y +++
Sbjct:   232 NREFTECLARLLNRPAPLPVPAFTLRLALGETAELLLGGQRVIPKRLQQEPFRFRYEHLE 291

Query:   348 DALK 351
             +AL+
Sbjct:   292 NALR 295

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

UNIPROTKB|Q81YW5 BAS0486 "Cell division inhibitor-like protein" [Bacillus anthracis (taxid:1392)]

 Score = 531 (192.0 bits), Expect = 4.0e-51, P = 4.0e-51
 Identities = 114/308 (37%), Positives = 175/308 (56%)

Query:    51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKK-TRFFPGVMIAEEPQ 109
             M ++++G TGFIG  L        + V +LTR ++  E   P  +  ++ P +     P 
Sbjct:     1 MKIAISGGTGFIGTYLSTFFIQKGYTVYILTRKKT-TETSHPNLQYVQWTPDLQTF--P- 56

Query:   110 WRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVS 169
                 +     V+NLAG  I +RW+ + KK I  SRI+ T  ++  +   P   +P   ++
Sbjct:    57 ----LSSIDVVINLAGESINSRWTKKQKKIILNSRIQTTKGLIKQLQALP--AKPHTFIN 110

Query:   170 ATALGYYGTSETEVFDESSPS-GNDYLAEVCREWEGTALKVNK-DVRLALIRIGIVLGKD 227
             A+A+GYYGTSETE F E   + GND+LA     WE  A K     +R    R G++LG D
Sbjct:   111 ASAIGYYGTSETESFTEQHVTPGNDFLANTVYSWEQEASKARSLGIRTIYARFGVILGPD 170

Query:   228 GGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRGVINGTAPNPVR 287
             GGAL KM+  +  + GG +GSG+QW SWIH+DD+ ++I   +      G +N TAP P+R
Sbjct:   171 GGALPKMLLPYQFYIGGTVGSGKQWLSWIHIDDVASMIDFIIHKKEIDGPLNITAPEPIR 230

Query:   288 LAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPFKYRYVK 347
             +    + +  ++ +P WLPVP F L A+LGE + +VLEGQ V+P++A E G+ + +  + 
Sbjct:   231 MKGFGETIATIMKKPHWLPVPSFMLHALLGEMSILVLEGQHVLPSKAIEHGYQYTFPTID 290

Query:   348 DALKAIMS 355
              AL+ I+S
Sbjct:   291 HALQNILS 298

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

TIGR_CMR|BA_0515 BA_0515 "cell division inhibitor-like protein" [Bacillus anthracis str. Ames (taxid:198094)]

 Score = 531 (192.0 bits), Expect = 4.0e-51, P = 4.0e-51
 Identities = 114/308 (37%), Positives = 175/308 (56%)

Query:    51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKK-TRFFPGVMIAEEPQ 109
             M ++++G TGFIG  L        + V +LTR ++  E   P  +  ++ P +     P 
Sbjct:     1 MKIAISGGTGFIGTYLSTFFIQKGYTVYILTRKKT-TETSHPNLQYVQWTPDLQTF--P- 56

Query:   110 WRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVS 169
                 +     V+NLAG  I +RW+ + KK I  SRI+ T  ++  +   P   +P   ++
Sbjct:    57 ----LSSIDVVINLAGESINSRWTKKQKKIILNSRIQTTKGLIKQLQALP--AKPHTFIN 110

Query:   170 ATALGYYGTSETEVFDESSPS-GNDYLAEVCREWEGTALKVNK-DVRLALIRIGIVLGKD 227
             A+A+GYYGTSETE F E   + GND+LA     WE  A K     +R    R G++LG D
Sbjct:   111 ASAIGYYGTSETESFTEQHVTPGNDFLANTVYSWEQEASKARSLGIRTIYARFGVILGPD 170

Query:   228 GGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRGVINGTAPNPVR 287
             GGAL KM+  +  + GG +GSG+QW SWIH+DD+ ++I   +      G +N TAP P+R
Sbjct:   171 GGALPKMLLPYQFYIGGTVGSGKQWLSWIHIDDVASMIDFIIHKKEIDGPLNITAPEPIR 230

Query:   288 LAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPFKYRYVK 347
             +    + +  ++ +P WLPVP F L A+LGE + +VLEGQ V+P++A E G+ + +  + 
Sbjct:   231 MKGFGETIATIMKKPHWLPVPSFMLHALLGEMSILVLEGQHVLPSKAIEHGYQYTFPTID 290

Query:   348 DALKAIMS 355
              AL+ I+S
Sbjct:   291 HALQNILS 298

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

UNIPROTKB|Q8ED48 yfcH "Predicted nucleoside-diphosphate sugar epimerase YfcH" [Shewanella oneidensis MR-1 (taxid:211586)]

 Score = 520 (188.1 bits), Expect = 5.8e-50, P = 5.8e-50
 Identities = 116/306 (37%), Positives = 181/306 (59%)

Query:    51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQW 110
             M + +TGA+GFIG++LV  L A+ H++ +LTR       +  G + ++   +   +E   
Sbjct:     1 MKILITGASGFIGQQLVAHL-ANQHELLLLTRHPGSIRQLL-GPQHQYLSSL---DEI-- 53

Query:   111 RDCIQGSTAVVNLAGTPI-GTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVS 169
              D +    AV+NLAG PI   RWS++ K+ I +SR  +T+++  LI +S     P V++S
Sbjct:    54 -DDLNHINAVINLAGEPIVAKRWSAQQKQHICDSRWNITARLSQLILQSNNP--PQVMIS 110

Query:   170 ATALGYYGTSETEVFDESSPSGNDYLAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGG 229
              +A+G+YG       DE +   +++  ++C+EWE  ALK     R+ ++R GIVLG  GG
Sbjct:   111 GSAIGFYGRQGAIPIDEHAVPHSEFSHDICKEWERLALKATSKTRVCILRTGIVLGH-GG 169

Query:   230 ALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRGVINGTAPNPVRLA 289
             ALAKM+P F +  GGP+G G+Q  SWIH+ D+V LI   L +    G+ N TAP PV   
Sbjct:   170 ALAKMLPPFKLGIGGPIGHGRQGMSWIHMHDMVALIEFLLCHQECHGIFNATAPYPVSNT 229

Query:   290 EMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPFKYRYVKDA 349
             E    LG VL RP+++  P   L+  +GE A ++ EGQ V+P  A + GF F++  ++ A
Sbjct:   230 EFSKTLGKVLNRPAFMTTPVPVLRLAMGEMADLLTEGQFVLPKHALDAGFTFRFEQLEPA 289

Query:   350 LKAIMS 355
             LK +++
Sbjct:   290 LKDLLA 295

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

TIGR_CMR|SO_2922 SO_2922 "conserved hypothetical protein" [Shewanella oneidensis MR-1 (taxid:211586)]

 Score = 520 (188.1 bits), Expect = 5.8e-50, P = 5.8e-50
 Identities = 116/306 (37%), Positives = 181/306 (59%)

Query:    51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQW 110
             M + +TGA+GFIG++LV  L A+ H++ +LTR       +  G + ++   +   +E   
Sbjct:     1 MKILITGASGFIGQQLVAHL-ANQHELLLLTRHPGSIRQLL-GPQHQYLSSL---DEI-- 53

Query:   111 RDCIQGSTAVVNLAGTPI-GTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVS 169
              D +    AV+NLAG PI   RWS++ K+ I +SR  +T+++  LI +S     P V++S
Sbjct:    54 -DDLNHINAVINLAGEPIVAKRWSAQQKQHICDSRWNITARLSQLILQSNNP--PQVMIS 110

Query:   170 ATALGYYGTSETEVFDESSPSGNDYLAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGG 229
              +A+G+YG       DE +   +++  ++C+EWE  ALK     R+ ++R GIVLG  GG
Sbjct:   111 GSAIGFYGRQGAIPIDEHAVPHSEFSHDICKEWERLALKATSKTRVCILRTGIVLGH-GG 169

Query:   230 ALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRGVINGTAPNPVRLA 289
             ALAKM+P F +  GGP+G G+Q  SWIH+ D+V LI   L +    G+ N TAP PV   
Sbjct:   170 ALAKMLPPFKLGIGGPIGHGRQGMSWIHMHDMVALIEFLLCHQECHGIFNATAPYPVSNT 229

Query:   290 EMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPFKYRYVKDA 349
             E    LG VL RP+++  P   L+  +GE A ++ EGQ V+P  A + GF F++  ++ A
Sbjct:   230 EFSKTLGKVLNRPAFMTTPVPVLRLAMGEMADLLTEGQFVLPKHALDAGFTFRFEQLEPA 289

Query:   350 LKAIMS 355
             LK +++
Sbjct:   290 LKDLLA 295

GO:0008150 "biological_process" evidence=ND

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

UNIPROTKB|Q4K6B2 PFL_5142 "Uncharacterized protein" [Pseudomonas protegens Pf-5 (taxid:220664)]

 Score = 515 (186.3 bits), Expect = 2.0e-49, P = 2.0e-49
 Identities = 123/305 (40%), Positives = 175/305 (57%)

Query:    51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQW 110
             M + +TG TG IGR L +  QA  HQ+ V TR   K   +  G + R    V   +E   
Sbjct:     1 MHILLTGGTGLIGRALCRHWQAQGHQLSVWTRQPDKVAALC-GPQVR---AVKTLQE--- 53

Query:   111 RDCIQGSTAVVNLAGTPIGTR-WSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVS 169
              D I    AV+NLAG PI  R WS + K  +  SRI +T  ++  + ES E  +P VLVS
Sbjct:    54 LDQIPVD-AVINLAGAPIADRPWSHKRKALLWHSRIALTETLLAWL-ESREH-KPGVLVS 110

Query:   170 ATALGYYGTS-ETEVFDESSPSGNDYLAEVCREWEGTALKVNK-DVRLALIRIGIVLGKD 227
              +A+G+YG   E E+ ++S P   D+ +++C  WE TA +     VR+ L+R G+VL  +
Sbjct:   111 GSAVGWYGDGGERELSEDSPPVNEDFASQLCIAWEETAQRAEAMGVRVVLVRTGLVLSPE 170

Query:   228 GGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRGVINGTAPNPVR 287
             GG L++++  F +  GGP+G+G+QW  WIH+DD + LI   +  P  +G  N  AP PVR
Sbjct:   171 GGFLSRLLLPFKLGLGGPIGNGRQWMPWIHIDDQIALIDFLVHQPGAQGPYNACAPKPVR 230

Query:   288 LAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPFKYRYVK 347
               E    LG VL RP+ +P+P F L+  LGE + ++L GQR VPAR  E GF F++  + 
Sbjct:   231 NREFAKTLGRVLHRPALIPLPAFFLRLALGELSLLLLGGQRAVPARLLEAGFTFQFTDLP 290

Query:   348 DALKA 352
              AL A
Sbjct:   291 AALDA 295

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

UNIPROTKB|Q47V18 CPS_4710 "Putative uncharacterized protein" [Colwellia psychrerythraea 34H (taxid:167879)]

 Score = 501 (181.4 bits), Expect = 6.0e-48, P = 6.0e-48
 Identities = 112/307 (36%), Positives = 170/307 (55%)

Query:    51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQW 110
             M + VTG TG IGR  +       +Q  VLTR+  KA+L  P K   F   +    E  +
Sbjct:     1 MKILVTGGTGLIGRHFISAFN-HKYQFTVLTRNTQKAQLYLP-KNIEFIEQL---PEQNY 55

Query:   111 RDCIQGSTAVVNLAGTPI-GTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVS 169
              D I      +NLAG PI   RWS   K+ I +SR  +T K+V++I  + +  +PS L+S
Sbjct:    56 FDVI------INLAGEPIIDKRWSRAQKENICQSRWNITEKIVEMIARATD--KPSCLIS 107

Query:   170 ATALGYYG-TSETEVFDESSPSGNDYLAEVCREWEGTALKVNKDVRLALIRIGIVLGKDG 228
              +A+GYYG T      +++  + +D+   +C++WE  ALK  +  R+ L+R GIVL  DG
Sbjct:   108 GSAIGYYGETGAVSTHEDAKVTHSDFAHTLCQKWEELALKAKEHCRVVLLRTGIVLASDG 167

Query:   229 GALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRGVINGTAPNPVRL 288
             GAL KM   F +  GG LG+GQQ+ SWIH+DD+++ I+ ++      G IN T+P  +  
Sbjct:   168 GALEKMRLPFSLGLGGKLGNGQQYMSWIHIDDMIHAIHFSVQIKCIEGAINCTSPKAITN 227

Query:   289 AEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPFKYRYVKD 348
                   LG  + RP+W  VP F L  ++G+GA ++L  Q + P +    GF F +  ++ 
Sbjct:   228 EVFTKALGKEVNRPTWFSVPAFVLNILMGQGAELLLTSQNIYPQKLLSHGFHFNHSDIEH 287

Query:   349 ALKAIMS 355
             AL  +M+
Sbjct:   288 ALADLMT 294

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

TIGR_CMR|CPS_4710 CPS_4710 "conserved hypothetical protein TIGR01777" [Colwellia psychrerythraea 34H (taxid:167879)]

 Score = 501 (181.4 bits), Expect = 6.0e-48, P = 6.0e-48
 Identities = 112/307 (36%), Positives = 170/307 (55%)

Query:    51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQW 110
             M + VTG TG IGR  +       +Q  VLTR+  KA+L  P K   F   +    E  +
Sbjct:     1 MKILVTGGTGLIGRHFISAFN-HKYQFTVLTRNTQKAQLYLP-KNIEFIEQL---PEQNY 55

Query:   111 RDCIQGSTAVVNLAGTPI-GTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVS 169
              D I      +NLAG PI   RWS   K+ I +SR  +T K+V++I  + +  +PS L+S
Sbjct:    56 FDVI------INLAGEPIIDKRWSRAQKENICQSRWNITEKIVEMIARATD--KPSCLIS 107

Query:   170 ATALGYYG-TSETEVFDESSPSGNDYLAEVCREWEGTALKVNKDVRLALIRIGIVLGKDG 228
              +A+GYYG T      +++  + +D+   +C++WE  ALK  +  R+ L+R GIVL  DG
Sbjct:   108 GSAIGYYGETGAVSTHEDAKVTHSDFAHTLCQKWEELALKAKEHCRVVLLRTGIVLASDG 167

Query:   229 GALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRGVINGTAPNPVRL 288
             GAL KM   F +  GG LG+GQQ+ SWIH+DD+++ I+ ++      G IN T+P  +  
Sbjct:   168 GALEKMRLPFSLGLGGKLGNGQQYMSWIHIDDMIHAIHFSVQIKCIEGAINCTSPKAITN 227

Query:   289 AEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPFKYRYVKD 348
                   LG  + RP+W  VP F L  ++G+GA ++L  Q + P +    GF F +  ++ 
Sbjct:   228 EVFTKALGKEVNRPTWFSVPAFVLNILMGQGAELLLTSQNIYPQKLLSHGFHFNHSDIEH 287

Query:   349 ALKAIMS 355
             AL  +M+
Sbjct:   288 ALADLMT 294

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q8CPY7	Y553_STAES	No assigned EC number	0.3387	0.8028	0.9531	yes	no
Q2YSF6	Y724_STAAB	No assigned EC number	0.3398	0.8140	0.9633	yes	no
P71373	Y1208_HAEIN	No assigned EC number	0.3594	0.8140	0.9763	yes	no
P67232	Y2216_MYCTU	No assigned EC number	0.3398	0.8112	0.9568	yes	no
P67233	Y2239_MYCBO	No assigned EC number	0.3398	0.8112	0.9568	yes	no
Q6GB61	Y734_STAAS	No assigned EC number	0.3344	0.8112	0.96	yes	no
O32960	Y860_MYCLE	No assigned EC number	0.3516	0.8225	0.9511	yes	no
Q5HHP9	Y834_STAAC	No assigned EC number	0.3344	0.8112	0.96	yes	no
Q6GIM1	Y825_STAAR	No assigned EC number	0.3431	0.8140	0.9633	yes	no
Q17QH8	D39U1_BOVIN	No assigned EC number	0.3472	0.8112	0.9795	yes	no
Q7A6Q5	Y724_STAAN	No assigned EC number	0.3344	0.8112	0.96	yes	no
Q99VK8	Y769_STAAM	No assigned EC number	0.3344	0.8112	0.96	yes	no
Q5HQV8	Y438_STAEQ	No assigned EC number	0.3387	0.8028	0.9531	yes	no
Q2G035	Y792_STAA8	No assigned EC number	0.3344	0.8112	0.96	yes	no
Q8NXL7	Y731_STAAW	No assigned EC number	0.3344	0.8112	0.96	yes	no
O31574	YFHF_BACSU	No assigned EC number	0.3517	0.8338	0.9768	yes	no
Q4L4J7	Y2119_STAHJ	No assigned EC number	0.3377	0.8140	0.9665	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	355
TIGR01777	291	TIGR01777, yfcH, TIGR01777 family protein	1e-134
cd05242	296	cd05242, SDR_a8, atypical (a) SDRs, subgroup 8	1e-132
COG1090	297	COG1090, COG1090, Predicted nucleoside-diphosphate	1e-123
COG0451	314	COG0451, WcaG, Nucleoside-diphosphate-sugar epimer	1e-26
cd05271	273	cd05271, NDUFA9_like_SDR_a, NADH dehydrogenase (ub	1e-19
cd05232	303	cd05232, UDP_G4E_4_SDR_e, UDP-glucose 4 epimerase,	7e-18
cd05226	176	cd05226, SDR_e_a, Extended (e) and atypical (a) SD	2e-17
pfam08338	48	pfam08338, DUF1731, Domain of unknown function (DU	6e-17
pfam01370	233	pfam01370, Epimerase, NAD dependent epimerase/dehy	7e-17
cd05266	251	cd05266, SDR_a4, atypical (a) SDRs, subgroup 4	6e-16
pfam13460	182	pfam13460, NAD_binding_10, NADH(P)-binding	1e-13
COG0702	275	COG0702, COG0702, Predicted nucleoside-diphosphate	1e-11
cd08946	200	cd08946, SDR_e, extended (e) SDRs	1e-11
cd05265	250	cd05265, SDR_a1, atypical (a) SDRs, subgroup 1	6e-11
cd05228	318	cd05228, AR_FR_like_1_SDR_e, uncharacterized subgr	2e-10
cd05243	203	cd05243, SDR_a5, atypical (a) SDRs, subgroup 5	1e-09
cd05240	306	cd05240, UDP_G4E_3_SDR_e, UDP-glucose 4 epimerase	4e-09
cd05262	291	cd05262, SDR_a7, atypical (a) SDRs, subgroup 7	1e-08
cd05263	293	cd05263, MupV_like_SDR_e, Pseudomonas fluorescens	6e-08
cd05231	259	cd05231, NmrA_TMR_like_1_SDR_a, NmrA (a transcript	2e-07
cd05227	301	cd05227, AR_SDR_e, aldehyde reductase, extended (e	5e-07
cd05256	304	cd05256, UDP_AE_SDR_e, UDP-N-acetylglucosamine 4-e	2e-06
cd05245	293	cd05245, SDR_a2, atypical (a) SDRs, subgroup 2	3e-06
TIGR03466	328	TIGR03466, HpnA, hopanoid-associated sugar epimera	5e-06
PRK07201	657	PRK07201, PRK07201, short chain dehydrogenase; Pro	1e-05
PLN02650	351	PLN02650, PLN02650, dihydroflavonol-4-reductase	2e-05
cd05264	300	cd05264, UDP_G4E_5_SDR_e, UDP-glucose 4-epimerase	2e-05
cd05259	282	cd05259, PCBER_SDR_a, phenylcoumaran benzylic ethe	3e-05
cd05257	316	cd05257, Arna_like_SDR_e, Arna decarboxylase_like,	3e-05
cd05269	272	cd05269, TMR_SDR_a, triphenylmethane reductase (TM	8e-05
cd05229	302	cd05229, SDR_a3, atypical (a) SDRs, subgroup 3	3e-04
TIGR01746	367	TIGR01746, Thioester-redct, thioester reductase do	6e-04
cd05261	248	cd05261, CAPF_like_SDR_e, capsular polysaccharide	7e-04
cd05238	305	cd05238, Gne_like_SDR_e, Escherichia coli Gne (a n	8e-04
pfam07993	245	pfam07993, NAD_binding_4, Male sterility protein	0.001
pfam05368	232	pfam05368, NmrA, NmrA-like family	0.001
PLN02986	322	PLN02986, PLN02986, cinnamyl-alcohol dehydrogenase	0.001
cd05193	295	cd05193, AR_like_SDR_e, aldehyde reductase, flavon	0.001
pfam01073	280	pfam01073, 3Beta_HSD, 3-beta hydroxysteroid dehydr	0.001
PLN02657	390	PLN02657, PLN02657, 3,8-divinyl protochlorophyllid	0.002
PRK07577	234	PRK07577, PRK07577, short chain dehydrogenase; Pro	0.004
cd05254	280	cd05254, dTDP_HR_like_SDR_e, dTDP-6-deoxy-L-lyxo-4	0.004
cd05251	242	cd05251, NmrA_like_SDR_a, NmrA (a transcriptional	0.004

>gnl|CDD|233570 TIGR01777, yfcH, TIGR01777 family protein

 Score =  383 bits (987), Expect = e-134
 Identities = 139/301 (46%), Positives = 187/301 (62%), Gaps = 13/301 (4%)

Query: 53  VSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRD 112
           + +TG TGFIGR L QRL    H+V +LTRS        P                +  D
Sbjct: 1   ILITGGTGFIGRALTQRLTKRGHEVTILTRS--------PPPGANTKWEGYKPWAGEDAD 52

Query: 113 CIQGSTAVVNLAGTPIGT-RWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSAT 171
            ++G+ AV+NLAG PI   RW+ E K+EI++SRI  T  +V+ I  + +  +P V +SA+
Sbjct: 53  SLEGADAVINLAGEPIADKRWTEERKQEIRDSRIDTTRLLVEAIAAAEQ--KPKVFISAS 110

Query: 172 ALGYYGTSETEVFDE-SSPSGNDYLAEVCREWEGTALKVNK-DVRLALIRIGIVLGKDGG 229
           A+GYYG SE   + E  SP+G+D+LAE+CR+WE  A        R+ L+R GIVLG  GG
Sbjct: 111 AVGYYGPSEDREYTEEDSPAGDDFLAELCRDWEEAAQAAEDLGTRVVLLRTGIVLGPKGG 170

Query: 230 ALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRGVINGTAPNPVRLA 289
           ALAKM+  F +  GGPLGSG+QWFSWIH++D+V LI  AL N S  G +N TAP PVR  
Sbjct: 171 ALAKMLLPFRLGLGGPLGSGRQWFSWIHIEDLVQLILFALENASVSGPVNATAPEPVRNK 230

Query: 290 EMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPFKYRYVKDA 349
           E    L   L RP++ PVP F L+A+LGE A ++L+GQRV+P +  E GF F+Y  + +A
Sbjct: 231 EFAKALARALHRPAFFPVPAFVLRALLGEMAALLLKGQRVLPEKLLEAGFQFQYPDLDEA 290

Query: 350 L 350
           L
Sbjct: 291 L 291

This model represents a clade of proteins of unknown function including the E. coli yfcH protein [Hypothetical proteins, Conserved]. Length = 291

>gnl|CDD|187553 cd05242, SDR_a8, atypical (a) SDRs, subgroup 8

 Score =  379 bits (976), Expect = e-132
 Identities = 145/312 (46%), Positives = 190/312 (60%), Gaps = 25/312 (8%)

Query: 52  TVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWR 111
            + +TG TGFIGR L +RL A  H+V VL+R   KAE +              AE   W 
Sbjct: 1   KIVITGGTGFIGRALTRRLTAAGHEVVVLSRRPGKAEGL--------------AEVITWD 46

Query: 112 DC------IQGSTAVVNLAGTPI-GTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRP 164
                   + G+ AV+NLAG PI   RW+   KKEI  SRI  T  +V+ I  +P    P
Sbjct: 47  GLSLGPWELPGADAVINLAGEPIACRRWTEANKKEILSSRIESTRVLVEAIANAPA--PP 104

Query: 165 SVLVSATALGYYGTSETEVFDESSPSGNDYLAEVCREWEGTALKVNK-DVRLALIRIGIV 223
            VL+SA+A+GYYG S  EV  E+SPSG D+LAEVC+ WE  A   ++   R+ ++R G+V
Sbjct: 105 KVLISASAVGYYGHSGDEVLTENSPSGKDFLAEVCKAWEKAAQPASELGTRVVILRTGVV 164

Query: 224 LGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRGVINGTAP 283
           LG DGGAL KM+  F +  GGPLGSG+QW SWIH+DD+V LI  A+ NP   G +N  AP
Sbjct: 165 LGPDGGALPKMLLPFRLGLGGPLGSGRQWMSWIHIDDLVRLIEFAIENPDLSGPVNAVAP 224

Query: 284 NPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEG-AFVVLEGQRVVPARAKELGFPFK 342
           NPV  AE    LG  L RP+ LPVP FALK   GE  A ++L+GQRV+P R  + GF F+
Sbjct: 225 NPVTNAEFTKALGRALHRPAGLPVPAFALKLGFGEMRAELLLKGQRVLPERLLDAGFQFR 284

Query: 343 YRYVKDALKAIM 354
           Y  +++AL+ ++
Sbjct: 285 YPDLEEALEELL 296

This subgroup contains atypical SDRs of unknown function. Proteins in this subgroup have a glycine-rich NAD(P)-binding motif consensus that resembles that of the extended SDRs, (GXXGXXG or GGXGXXG), but lacks the characteristic active site residues of the SDRs. A Cys often replaces the usual Lys of the YXXXK active site motif, while the upstream Ser is generally present and Arg replaces the usual Asn. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 296

>gnl|CDD|224015 COG1090, COG1090, Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]

 Score =  355 bits (914), Expect = e-123
 Identities = 141/305 (46%), Positives = 189/305 (61%), Gaps = 12/305 (3%)

Query: 53  VSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRD 112
           + +TG TG IGR L  RL+   HQV +LTR   KA           + G+  A       
Sbjct: 1   ILITGGTGLIGRALTARLRKGGHQVTILTRRPPKASQNLH-PNVTLWEGLADALT----- 54

Query: 113 CIQGSTAVVNLAGTPIGT-RWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSAT 171
              G  AV+NLAG PI   RW+ + K+EI++SRI  T K+V+LI  S    +P VL+SA+
Sbjct: 55  --LGIDAVINLAGEPIAERRWTEKQKEEIRQSRINTTEKLVELIAASET--KPKVLISAS 110

Query: 172 ALGYYGTSETEVFDESSPSGNDYLAEVCREWEGTALKVNKD-VRLALIRIGIVLGKDGGA 230
           A+GYYG S   V  E SP G+D+LA++C++WE  AL+  +   R+ L+R G+VL  DGGA
Sbjct: 111 AVGYYGHSGDRVVTEESPPGDDFLAQLCQDWEEEALQAQQLGTRVVLLRTGVVLSPDGGA 170

Query: 231 LAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRGVINGTAPNPVRLAE 290
           L KM+PLF +  GG LGSG+QWFSWIH++D+VN I   L N    G  N TAPNPVR  E
Sbjct: 171 LGKMLPLFKLGLGGKLGSGRQWFSWIHIEDLVNAILFLLENEQLSGPFNLTAPNPVRNKE 230

Query: 291 MCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPFKYRYVKDAL 350
               LG  L RP+ LPVP FAL+ +LGE A ++L GQRV+P + +  GF F+Y  +++AL
Sbjct: 231 FAHALGRALHRPAILPVPSFALRLLLGEMADLLLGGQRVLPKKLEAAGFQFQYPDLEEAL 290

Query: 351 KAIMS 355
             I+ 
Sbjct: 291 ADILK 295

Length = 297

>gnl|CDD|223528 COG0451, WcaG, Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

 Score =  107 bits (269), Expect = 1e-26
 Identities = 67/323 (20%), Positives = 120/323 (37%), Gaps = 35/323 (10%)

Query: 51  MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQW 110
           M + VTG  GFIG  LV+RL A  H VR L R R   + +  G    F    +   +   
Sbjct: 1   MRILVTGGAGFIGSHLVERLLAAGHDVRGLDRLRDGLDPLLSGV--EFVVLDLTDRDLVD 58

Query: 111 RDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSA 170
                   AV++LA        ++    E  +  +  T  +++       GV+  V  S+
Sbjct: 59  ELAKGVPDAVIHLAAQSSVPDSNASDPAEFLDVNVDGTLNLLEAA--RAAGVKRFVFASS 116

Query: 171 TALGYYGTSETEVFDESSP---SGNDY-----LAE-VCREWEGTALKVNKDVRLALIRIG 221
            +   YG       DE        N Y      AE + R +          + + ++R  
Sbjct: 117 VS-VVYGDPPPLPIDEDLGPPRPLNPYGVSKLAAEQLLRAYARLY-----GLPVVILRPF 170

Query: 222 IVLG----KDGGALAKMIPLFMMFAGGPL----GSGQQWFSWIHLDDIVNLIYEALSNPS 273
            V G     D  +      +  +  G P+    G G Q   ++++DD+ + +  AL NP 
Sbjct: 171 NVYGPGDKPDLSSGVVSAFIRQLLKGEPIIVIGGDGSQTRDFVYVDDVADALLLALENPD 230

Query: 274 YRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPAR 333
                 G+    + + E+ + +   +G  + L V               + EG+ +  ++
Sbjct: 231 GGVFNIGSGTAEITVRELAEAVAEAVGSKAPLIVYI------PLGRRGDLREGKLLDISK 284

Query: 334 AK-ELGFPFKYRYVKDALKAIMS 355
           A+  LG+  K    ++ L   + 
Sbjct: 285 ARAALGWEPKVSL-EEGLADTLE 306

Length = 314

>gnl|CDD|187579 cd05271, NDUFA9_like_SDR_a, NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, subunit 9, 39 kDa, (NDUFA9) -like, atypical (a) SDRs

 Score = 86.9 bits (216), Expect = 1e-19
 Identities = 69/288 (23%), Positives = 108/288 (37%), Gaps = 52/288 (18%)

Query: 51  MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAE---- 106
           M V+V GATGFIGR +V RL     QV V  R                   V+  E    
Sbjct: 1   MVVTVFGATGFIGRYVVNRLAKRGSQVIVPYRCE---AYARRLLVMGDLGQVLFVEFDLR 57

Query: 107 -EPQWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPS 165
            +   R  ++GS  V+NL G    T+  S      ++  +    ++     E+  GV   
Sbjct: 58  DDESIRKALEGSDVVINLVGRLYETKNFS-----FEDVHVEGPERLAKAAKEA--GVERL 110

Query: 166 VLVSATALGYYGTSETEVFDESSPS--------GNDYLAEVCREWEGTALKVNKDVRLAL 217
           + +S  ALG          D +SPS        G + + E   E               +
Sbjct: 111 IHIS--ALGA---------DANSPSKYLRSKAEGEEAVREAFPEA-------------TI 146

Query: 218 IRIGIVLGKDGGALAK--MIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYR 275
           +R  +V G++   L +   +  F+ F     G GQ  F  +++ D+   I  AL +P   
Sbjct: 147 VRPSVVFGREDRFLNRFAKLLAFLPFPPLIGG-GQTKFQPVYVGDVAEAIARALKDPETE 205

Query: 276 GVINGTA-PNPVRLAEMCDHLGNVLGRPSW-LPVPEFALKAVLGEGAF 321
           G       P    LAE+ + L  + GR    LP+P +  + +      
Sbjct: 206 GKTYELVGPKVYTLAELVELLRRLGGRKRRVLPLPLWLARLIARVKLL 253

This subgroup of extended SDR-like proteins are atypical SDRs. They have a glycine-rich NAD(P)-binding motif similar to the typical SDRs, GXXGXXG, and have the YXXXK active site motif (though not the other residues of the SDR tetrad). Members identified include NDUFA9 (mitochondrial) and putative nucleoside-diphosphate-sugar epimerase. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 273

>gnl|CDD|187543 cd05232, UDP_G4E_4_SDR_e, UDP-glucose 4 epimerase, subgroup 4, extended (e) SDRs

 Score = 82.4 bits (204), Expect = 7e-18
 Identities = 75/276 (27%), Positives = 120/276 (43%), Gaps = 32/276 (11%)

Query: 52  TVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAE--EPQ 109
            V VTGA GFIGR LV +L +   +VR+  R+   AE           P V++AE  +  
Sbjct: 1   KVLVTGANGFIGRALVDKLLSRGEEVRIAVRNAENAE-----------PSVVLAELPDID 49

Query: 110 WR-DCIQGSTAVVNLAG-TPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVL 167
              D   G  AVV+LA    +     ++   + ++    +T ++        +GV+  V 
Sbjct: 50  SFTDLFLGVDAVVHLAARVHVMNDQGADPLSDYRKVNTELTRRLARAAAR--QGVKRFVF 107

Query: 168 VSA-TALGYYGTSETEVFDE-SSPSGNDYLAEVCREWEGTALKVNKD--VRLALIRIGIV 223
           +S+    G         FDE   P+  D       E E   L++     + + ++R  +V
Sbjct: 108 LSSVKVNGEGTVGAP--FDETDPPAPQDAYGRSKLEAERALLELGASDGMEVVILRPPMV 165

Query: 224 LGKDG-GALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRGVINGTA 282
            G    G  A+++ L       P G+ +   S + LD++V+ IY  +S P      NGT 
Sbjct: 166 YGPGVRGNFARLMRLIDRGLPLPPGAVKNRRSLVSLDNLVDAIYLCISLP---KAANGTF 222

Query: 283 ----PNPVRLAEMCDHLGNVLGRPSW-LPVPEFALK 313
                 PV  AE+ D +   LG+P+  LPVP   L+
Sbjct: 223 LVSDGPPVSTAELVDEIRRALGKPTRLLPVPAGLLR 258

UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup is comprised of bacterial proteins, and includes the Staphylococcus aureus capsular polysaccharide Cap5N, which may have a role in the synthesis of UDP-N-acetyl-d-fucosamine. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 303

>gnl|CDD|187537 cd05226, SDR_e_a, Extended (e) and atypical (a) SDRs

 Score = 78.6 bits (194), Expect = 2e-17
 Identities = 44/183 (24%), Positives = 82/183 (44%), Gaps = 19/183 (10%)

Query: 53  VSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRD 112
           + + GATGFIGR L + L    H+V +L R+  +       ++        + +     D
Sbjct: 1   ILILGATGFIGRALARELLEQGHEVTLLVRNTKRL--SKEDQEPVAVVEGDLRDLDSLSD 58

Query: 113 CIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATA 172
            +QG   V++LAG P  TR       +  E  +  T  V++   E+  GV+  + +S+  
Sbjct: 59  AVQGVDVVIHLAGAPRDTR-------DFCEVDVEGTRNVLEAAKEA--GVKHFIFISSL- 108

Query: 173 LGYYGTSETEVFDESSPSGNDYLAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALA 232
            G YG    ++ +E+ PS +     V  + E    + +  +   ++R G++ G    A+A
Sbjct: 109 -GAYG----DLHEETEPSPSSPYLAVKAKTEAVLREAS--LPYTIVRPGVIYGDLARAIA 161

Query: 233 KMI 235
             +
Sbjct: 162 NAV 164

Extended or atypical short-chain dehydrogenases/reductases (SDRs, aka tyrosine-dependent oxidoreductases) are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 176

>gnl|CDD|203914 pfam08338, DUF1731, Domain of unknown function (DUF1731)

 Score = 73.2 bits (181), Expect = 6e-17
 Identities = 25/47 (53%), Positives = 35/47 (74%)

Query: 307 VPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPFKYRYVKDALKAI 353
           VP FALK +LGE A ++LEGQRV+P +  E GF F+Y  ++DAL+ +
Sbjct: 1   VPAFALKLLLGEMAELLLEGQRVLPKKLLEAGFQFRYPTLEDALRDL 47

This domain of unknown function appears towards the C-terminus of proteins of the NAD dependent epimerase/dehydratase family (pfam01370) in bacteria, eukaryotes and archaea. Many of the proteins in which it is found are involved in cell-division inhibition. Length = 48

>gnl|CDD|216461 pfam01370, Epimerase, NAD dependent epimerase/dehydratase family

 Score = 78.5 bits (194), Expect = 7e-17
 Identities = 60/247 (24%), Positives = 97/247 (39%), Gaps = 40/247 (16%)

Query: 55  VTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKT------------RFFPGV 102
           VTG TGFIG  LV+RL  + ++V VL R R    L     +             R    V
Sbjct: 3   VTGGTGFIGSHLVRRLLQEGYEVIVLGRRRRSESLNTGRIRFHEGDLTDPDALERLLAEV 62

Query: 103 MIAEEPQWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGV 162
                           AV++LA    G   S E   +   + +  T ++++    +  GV
Sbjct: 63  QP-------------DAVIHLAA-QSGVGASFEDPADFIRANVLGTLRLLEAARRA--GV 106

Query: 163 RPSVLVSATALGYYGTSETEVFDESSPSG--NDY-LAEVCREWEGTALKVNKDVRLALIR 219
           +  V  S++ +  YG        E +P G  + Y  A++  E    A      +R  ++R
Sbjct: 107 KRFVFASSSEV--YGDVADPPITEDTPLGPLSPYAAAKLAAERLVEAYARAYGLRAVILR 164

Query: 220 IGIVLGKDGGAL--AKMIPLFM--MFAGGP---LGSGQQWFSWIHLDDIVNLIYEALSNP 272
           +  V G          +IP  +  +  G P   LG G Q   ++++DD+   I  AL +P
Sbjct: 165 LFNVYGPGNPDPFVTHVIPALIRRILEGKPILLLGDGTQRRDFLYVDDVARAILLALEHP 224

Query: 273 SYRGVIN 279
               + N
Sbjct: 225 DGGEIYN 231

This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions. Length = 233

>gnl|CDD|187576 cd05266, SDR_a4, atypical (a) SDRs, subgroup 4

 Score = 76.2 bits (188), Expect = 6e-16
 Identities = 69/290 (23%), Positives = 105/290 (36%), Gaps = 43/290 (14%)

Query: 53  VSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRD 112
           V + G  G++G+RL ++L A   QV   TRS  K     P       P  + A+  Q   
Sbjct: 1   VLILGC-GYLGQRLARQLLAQGWQVTGTTRSPEKLAADRPAG---VTP--LAADLTQPGL 54

Query: 113 CIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATA 172
                  V++L   P             +         ++D + + P  V+  + +S+T 
Sbjct: 55  LADVDHLVISLP--PPAGS--------YRGGYDPGLRALLDALAQLP-AVQRVIYLSST- 102

Query: 173 LGYYGTSETEVFDESSPSGNDYLAEVCR-EWEGTALKVNKDVRLALIRIGIVLGKD---G 228
            G YG  + E  DE+SP      +     E E   L +       ++R+  + G      
Sbjct: 103 -GVYGDQQGEWVDETSPPNPSTESGRALLEAEQALLALGS-KPTTILRLAGIYGPGRHPL 160

Query: 229 GALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRGVINGTAPNPVRL 288
             LA+              +G    + IH+DD+V  +  AL  P+   V N     PV  
Sbjct: 161 RRLAQGTGR--------PPAGNAPTNRIHVDDLVGALAFALQRPAPGPVYNVVDDLPVTR 212

Query: 289 AEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKELG 338
            E       +LG    LP P F   A L        EG+RV   R K   
Sbjct: 213 GEFYQAAAELLG----LPPPPFIPFAFLR-------EGKRVSNDRLKAEL 251

Atypical SDRs in this subgroup are poorly defined, one member is identified as a putative NAD-dependent epimerase/dehydratase. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine-rich NAD(P)-binding motif that is related to, but is different from, the archetypical SDRs, GXGXXG. This subgroup also lacks most of the characteristic active site residues of the SDRs; however, the upstream Ser is present at the usual place, and some potential catalytic residues are present in place of the usual YXXXK active site motif. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 251

>gnl|CDD|222146 pfam13460, NAD_binding_10, NADH(P)-binding

 Score = 68.1 bits (167), Expect = 1e-13
 Identities = 50/219 (22%), Positives = 77/219 (35%), Gaps = 41/219 (18%)

Query: 55  VTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCI 114
           V GATG  GRRLV+ L A  HQV  L+R+ SKA    P           + +     + +
Sbjct: 3   VIGATGKTGRRLVKELLARGHQVTALSRNPSKA----PAPGVTPVQKD-LFDLADLAEAL 57

Query: 115 QGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALG 174
            G  AVV+  G         +               ++D    +  GVR  V+VSA  L 
Sbjct: 58  AGVDAVVDAFGA-----RPDDSDG---------VKHLLDAAARA--GVRRIVVVSAAGL- 100

Query: 175 YYGTSETEVFDESSPSGNDYLAEVCREWEGTALKV--NKDVRLALIRIGIVLGKDGGALA 232
            Y         + +P    Y        +  A ++     +   ++R G +  ++G    
Sbjct: 101 -YRDEPGTFRLDDAPLFPPYAR-----AKAAAEELLRASGLDWTIVRPGALFDEEGETYE 154

Query: 233 KMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSN 271
                     G P G      S I   D+   + + L N
Sbjct: 155 I------GTEGDPAG-----ESSISRADVAAALLDELEN 182

Length = 182

>gnl|CDD|223774 COG0702, COG0702, Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

 Score = 64.2 bits (156), Expect = 1e-11
 Identities = 63/272 (23%), Positives = 95/272 (34%), Gaps = 38/272 (13%)

Query: 51  MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQW 110
           M + VTGATGF+G  +V+ L A  H+VR   R+   A  +  G +        + +    
Sbjct: 1   MKILVTGATGFVGGAVVRELLARGHEVRAAVRNPEAAAALAGGVEVVL---GDLRDPKSL 57

Query: 111 RDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSA 170
               +G   V+ ++G   G+             R    + VV     +  GV+    VS 
Sbjct: 58  VAGAKGVDGVLLISGLLDGSDA----------FRAVQVTAVVRAAEAAGAGVK--HGVSL 105

Query: 171 TALGYYGTSETEVFDESSPSGNDYLAEVCR--EWEGTALKVNKDVRLALIRIGIVLGKDG 228
           + LG    S + +            A V       G        +R A   +G       
Sbjct: 106 SVLGADAASPSALARA--------KAAVEAALRSSGIPYTT---LRRAAFYLGAGAAFIE 154

Query: 229 GALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRG-VINGTAPNPVR 287
            A A  +P+     G          S I +DD+   +  AL  P+  G       P  + 
Sbjct: 155 AAEAAGLPVIPRGIGR--------LSPIAVDDVAEALAAALDAPATAGRTYELAGPEALT 206

Query: 288 LAEMCDHLGNVLGRPSWL-PVPEFALKAVLGE 318
           LAE+   L   +GRP  L P    AL   L  
Sbjct: 207 LAELASGLDYTIGRPVGLIPEALAALTLALSG 238

Length = 275

>gnl|CDD|212494 cd08946, SDR_e, extended (e) SDRs

 Score = 62.7 bits (153), Expect = 1e-11
 Identities = 60/241 (24%), Positives = 92/241 (38%), Gaps = 57/241 (23%)

Query: 53  VSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRD 112
           + VTG  GFIG  LV+RL    H+V V+ R                              
Sbjct: 1   ILVTGGAGFIGSHLVRRLLERGHEVVVIDR------------------------------ 30

Query: 113 CIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATA 172
                  VV+LA    G   S +   E  E+ +  T  +++   ++  GV+  V  S +A
Sbjct: 31  ----LDVVVHLAALV-GVPASWDNPDEDFETNVVGTLNLLEAARKA--GVKRFVYAS-SA 82

Query: 173 LGYYGTSETEVFDESSPS-GNDY-----LAE-VCREWEGTALKVNKDVRLALIRIGIVLG 225
             Y         +E+ P   + Y      AE + R +       +  + + ++R+  V G
Sbjct: 83  SVYGSPEGLPEEEETPPRPLSPYGVSKLAAEHLLRSY-----GESYGLPVVILRLANVYG 137

Query: 226 -KDGGALAKMIPLFM--MFAGGPL---GSGQQWFSWIHLDDIVNLIYEALSNPS-YRGVI 278
                 L  ++  F+     G PL   G G Q   +IH+DD+V  I  AL NP    GV 
Sbjct: 138 PGQRPRLDGVVNDFIRRALEGKPLTVFGGGNQTRDFIHVDDVVRAILHALENPLEGGGVY 197

Query: 279 N 279
           N
Sbjct: 198 N 198

Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 200

>gnl|CDD|187575 cd05265, SDR_a1, atypical (a) SDRs, subgroup 1

 Score = 61.5 bits (150), Expect = 6e-11
 Identities = 56/296 (18%), Positives = 89/296 (30%), Gaps = 82/296 (27%)

Query: 51  MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQW 110
           M + + G T FIG+ LV+ L A  H V V  R R+K     P                  
Sbjct: 1   MKILIIGGTRFIGKALVEELLAAGHDVTVFNRGRTKP--DLPEGVEHI------------ 46

Query: 111 RDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSK--------VVDLINESPEGV 162
                            +G R            R  +           VVD I  +P  V
Sbjct: 47  -----------------VGDR----------NDRDALEELLGGEDFDVVVDTIAYTPRQV 79

Query: 163 RPS-----------VLVSATALGYYGTSETEVFDESSPSGNDYLAEVCREWEGTALKV-- 209
             +           + +S+ ++  Y      V  ES+P        +   W+    K   
Sbjct: 80  ERALDAFKGRVKQYIFISSASV--YLKP-GRVITESTPLREPDAVGLSDPWDYGRGKRAA 136

Query: 210 ------NKDVRLALIRIGIVLG--KDGGALAKMIPLFMMFAGGPL---GSGQQWFSWIHL 258
                        ++R   + G     G LA       +  G P+   G G     +IH+
Sbjct: 137 EDVLIEAAAFPYTIVRPPYIYGPGDYTGRLAYFF--DRLARGRPILVPGDGHSLVQFIHV 194

Query: 259 DDIVNLIYEALSNP-SYRGVINGTAPNPVRLAEMCDHLGNVLGRPS---WLPVPEF 310
            D+   +  A  NP +  G+ N T    V   E+ +     LG+ +    +     
Sbjct: 195 KDLARALLGAAGNPKAIGGIFNITGDEAVTWDELLEACAKALGKEAEIVHVEEDFL 250

Atypical SDRs in this subgroup are poorly defined and have been identified putatively as isoflavones reductase, sugar dehydratase, mRNA binding protein etc. Atypical SDRs are distinct from classical SDRs. Members of this subgroup retain the canonical active site triad (though not the upstream Asn found in most SDRs) but have an unusual putative glycine-rich NAD(P)-binding motif, GGXXXXG, in the usual location. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 250

>gnl|CDD|187539 cd05228, AR_FR_like_1_SDR_e, uncharacterized subgroup of aldehyde reductase and flavonoid reductase related proteins, extended (e) SDRs

 Score = 60.8 bits (148), Expect = 2e-10
 Identities = 46/150 (30%), Positives = 63/150 (42%), Gaps = 24/150 (16%)

Query: 55  VTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAE-----EPQ 109
           VTGATGF+G  LV+ L A  ++VR L RS S A L+           V + E        
Sbjct: 3   VTGATGFLGSNLVRALLAQGYRVRALVRSGSDAVLLDG-------LPVEVVEGDLTDAAS 55

Query: 110 WRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVS 169
               ++G   V +LA     T   ++ +KE+  + +  T  V+D   E   GVR  V  S
Sbjct: 56  LAAAMKGCDRVFHLAAF---TSLWAKDRKELYRTNVEGTRNVLDAALE--AGVRRVVHTS 110

Query: 170 ATALGYYGTSETEVFDE-----SSPSGNDY 194
           + A    G       DE       P  NDY
Sbjct: 111 SIAA--LGGPPDGRIDETTPWNERPFPNDY 138

This subgroup contains proteins of unknown function related to aldehyde reductase and flavonoid reductase of the extended SDR-type. Aldehyde reductase I (aka carbonyl reductase) is an NADP-binding SDR; it has an NADP-binding motif consensus that is slightly different from the canonical SDR form and lacks the Asn of the extended SDR active site tetrad. Aldehyde reductase I catalyzes the NADP-dependent reduction of ethyl 4-chloro-3-oxobutanoate to ethyl (R)-4-chloro-3-hydroxybutanoate. The related flavonoid reductases act in the NADP-dependent reduction of flavonoids, ketone-containing plant secondary metabolites. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 318

>gnl|CDD|187554 cd05243, SDR_a5, atypical (a) SDRs, subgroup 5

 Score = 56.9 bits (138), Expect = 1e-09
 Identities = 25/75 (33%), Positives = 37/75 (49%), Gaps = 2/75 (2%)

Query: 52  TVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWR 111
            V V GATG +GR +V+ L    +QVR L R  S+AE +           +  AE     
Sbjct: 1   KVLVVGATGKVGRHVVRELLDRGYQVRALVRDPSQAEKLEAAGAEVVVGDLTDAESLA-- 58

Query: 112 DCIQGSTAVVNLAGT 126
             ++G  AV++ AG+
Sbjct: 59  AALEGIDAVISAAGS 73

This subgroup contains atypical SDRs, some of which are identified as putative NAD(P)-dependent epimerases, one as a putative NAD-dependent epimerase/dehydratase. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine-rich NAD(P)-binding motif that is very similar to the extended SDRs, GXXGXXG, and binds NADP. Generally, this subgroup has poor conservation of the active site tetrad; however, individual sequences do contain matches to the YXXXK active site motif, the upstream Ser, and there is a highly conserved Asp in place of the usual active site Asn throughout the subgroup. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 203

>gnl|CDD|187551 cd05240, UDP_G4E_3_SDR_e, UDP-glucose 4 epimerase (G4E), subgroup 3, extended (e) SDRs

 Score = 57.0 bits (138), Expect = 4e-09
 Identities = 64/311 (20%), Positives = 109/311 (35%), Gaps = 36/311 (11%)

Query: 53  VSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRD 112
           + VTGA G +GR L +RL A    + V    R +     P  K  +    +         
Sbjct: 1   ILVTGAAGGLGRLLARRLAASPRVIGVDGLDRRRPPGSPP--KVEYVRLDIRDPAAADVF 58

Query: 113 CIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRV--TSKVVDLINESPEGVRPSVLVSA 170
             + + AVV+LA            +   +  RI V  T  V+D    +  GV   V+ S+
Sbjct: 59  REREADAVVHLA------FILDPPRDGAERHRINVDGTQNVLDACAAA--GVPRVVVTSS 110

Query: 171 TALGYYGTSETEVFDESSPS-GNDYLAEVC--REWEG---TALKVNKDVRLALIRIGIVL 224
            A+            E +P  G+   A      E E       + + ++ + ++R   +L
Sbjct: 111 VAVYGAHPDNPAPLTEDAPLRGSPEFAYSRDKAEVEQLLAEFRRRHPELNVTVLRPATIL 170

Query: 225 GKDGGAL--AKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRGVINGTA 282
           G          + P  +   GG        F ++H DD+   +  A+   +  G+ N   
Sbjct: 171 GPGTRNTTRDFLSPRRLPVPGGFDPP----FQFLHEDDVARALVLAVRAGA-TGIFNVAG 225

Query: 283 PNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVL--------GEGAFVVLEGQRVVPARA 334
             PV L+ +   LG    RP  LP P  A  A                 L+   V+    
Sbjct: 226 DGPVPLSLVLALLG---RRPVPLPSPLPAALAAARRLGLRPLPPEQLDFLQYPPVMDTTR 282

Query: 335 KELGFPFKYRY 345
             +   ++ ++
Sbjct: 283 ARVELGWQPKH 293

Members of this bacterial subgroup are identified as possible sugar epimerases, such as UDP-glucose 4 epimerase. However, while the NAD(P)-binding motif is fairly well conserved, not all members retain the canonical active site tetrad of the extended SDRs. UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 306

>gnl|CDD|187572 cd05262, SDR_a7, atypical (a) SDRs, subgroup 7

 Score = 55.4 bits (134), Expect = 1e-08
 Identities = 72/301 (23%), Positives = 116/301 (38%), Gaps = 35/301 (11%)

Query: 51  MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRS-RSKAELIFPGKKTRFFPGVMIAEEPQ 109
           M V VTGATGFIG  +V+ L A  H+V  L RS    A+L   G +     G +  E+  
Sbjct: 1   MKVFVTGATGFIGSAVVRELVAAGHEVVGLARSDAGAAKLEAAGAQV--HRGDL--EDLD 56

Query: 110 -WRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGV-RPSVL 167
             R     + AV++LA T        +   +       V  + ++ + E+  G  +P + 
Sbjct: 57  ILRKAAAEADAVIHLAFT-----HDFDNFAQA----CEVDRRAIEALGEALRGTGKPLIY 107

Query: 168 VSATALG--YYGTSETEVFDESSPSGNDYLAEVCREWEGTALK-VNKDVR-LALIRIGIV 223
            S   L     G  E E   +  P+            E  AL+   + VR   +    +V
Sbjct: 108 TSGIWLLGPTGGQEEDEEAPDDPPTPAAR-----AVSEAAALELAERGVRASVVRLPPVV 162

Query: 224 LGKDGGALAKMIPLFM--MFAGGP---LGSGQQWFSWIHLDDIVNLIYEALSNPSYRGVI 278
            G+        +P+ +      G    +G G+  +  +H DD   L   AL       V 
Sbjct: 163 HGRGDHG---FVPMLIAIAREKGVSAYVGDGKNRWPAVHRDDAARLYRLALEKGKAGSVY 219

Query: 279 NGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARA-KEL 337
           +  A   + + ++ + +G  LG P  + +P     A  G  A  V   Q V   +  + L
Sbjct: 220 HAVAEEGIPVKDIAEAIGRRLGVPV-VSIPAEEAAAHFGWLAMFVALDQPVSSQKTRRRL 278

Query: 338 G 338
           G
Sbjct: 279 G 279

This subgroup contains atypical SDRs of unknown function. Members of this subgroup have a glycine-rich NAD(P)-binding motif consensus that matches the extended SDRs, TGXXGXXG, but lacks the characteristic active site residues of the SDRs. This subgroup has basic residues (HXXXR) in place of the active site motif YXXXK, these may have a catalytic role. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 291

>gnl|CDD|187573 cd05263, MupV_like_SDR_e, Pseudomonas fluorescens MupV-like, extended (e) SDRs

 Score = 53.1 bits (128), Expect = 6e-08
 Identities = 61/292 (20%), Positives = 99/292 (33%), Gaps = 43/292 (14%)

Query: 55  VTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEE------- 107
           VTG TGF+GR LV+RL  +  +V VL RS S  E     ++       +   E       
Sbjct: 3   VTGGTGFLGRHLVKRLLENGFKVLVLVRSESLGEAHERIEEAGLEADRVRVLEGDLTQPN 62

Query: 108 -----PQWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGV 162
                   R+       V++ A +     + +   ++   + I  T  V++L       +
Sbjct: 63  LGLSAAASRELAGKVDHVIHCAAS---YDFQAP-NEDAWRTNIDGTEHVLELAARL--DI 116

Query: 163 RPSVLVS--ATALGYYGTSETEVFDESSPSGNDYLAEVCREWEGTALKVNKDVRLALIRI 220
           +    VS    A    G       +      N Y      E E         + L + R 
Sbjct: 117 QRFHYVSTAYVAGNREGNIRETELNPGQNFKNPYEQSKA-EAEQLVRAAATQIPLTVYRP 175

Query: 221 GIVLG-KDGGALAKMIPL---FMMFAGGPLGSGQQWFSWIHLDDI--VNLI-----YEAL 269
            IV+G    G + K+  L     + A        +W   +  +    +NL+      +A+
Sbjct: 176 SIVVGDSKTGRIEKIDGLYELLNLLAKLG-----RWL-PMPGNKGARLNLVPVDYVADAI 229

Query: 270 SNPSYRGVING-----TAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVL 316
              S +   NG     T P P  L E+ D   +    P  L +      A L
Sbjct: 230 VYLSKKPEANGQIFHLTDPTPQTLREIADLFKSAFLSPGLLVLLMNEPNASL 281

This subgroup of extended SDR family domains have the characteristic active site tetrad and a well-conserved NAD(P)-binding motif. This subgroup is not well characterized, its members are annotated as having a variety of putative functions. One characterized member is Pseudomonas fluorescens MupV a protein involved in the biosynthesis of Mupirocin, a polyketide-derived antibiotic. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 293

>gnl|CDD|187542 cd05231, NmrA_TMR_like_1_SDR_a, NmrA (a transcriptional regulator) and triphenylmethane reductase (TMR) like proteins, subgroup 1, atypical (a) SDRs

 Score = 51.2 bits (123), Expect = 2e-07
 Identities = 68/287 (23%), Positives = 100/287 (34%), Gaps = 68/287 (23%)

Query: 55  VTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAEL-------IFPGKKTRFFPGVMIAEE 107
           VTGATG IG ++   L      VR L RS  +A         +  G      P V+    
Sbjct: 3   VTGATGRIGSKVATTLLEAGRPVRALVRSDERAAALAARGAEVVVGDLDD--PAVL---- 56

Query: 108 PQWRDCIQGSTAV---VNLAGTPIGTRW----SSEIKKEIKESRIRVTSKVVDL--INES 158
                 + G  AV      A T          +      ++E+ ++   +VV+L  +   
Sbjct: 57  ---AAALAGVDAVFFLAPPAPTADARPGYVQAAEAFASALREAGVK---RVVNLSSVGAD 110

Query: 159 PEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDYLAEVCREWEGTALKVNKDVRLALI 218
           PE   PS L+    L      E +V + +       +              N   +   I
Sbjct: 111 PES--PSGLIRGHWL-----ME-QVLNWAGL---PVVHLRP-----AWFMENLLSQAPSI 154

Query: 219 RIGIVLGKDGGALAKMIPLFMMFAG-GPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRG- 276
           R             K   L + F G G L         I  DDI  +  + L +P + G 
Sbjct: 155 R-------------KAGVLALPFPGDGRLP-------PIATDDIARVAAKLLLDPEWHGH 194

Query: 277 -VINGTAPNPVRLAEMCDHLGNVLGRP-SWLPVPEFALKAVLGEGAF 321
            V   T P  + + E+   L  VLGRP  ++PVPE   +A L    F
Sbjct: 195 RVYELTGPEDLTMNEIAAALSRVLGRPVRYVPVPEEQWEATLLSLGF 241

Atypical SDRs related to NMRa, TMR, and HSCARG (an NADPH sensor). This subgroup resembles the SDRs and has a partially conserved characteristic [ST]GXXGXXG NAD-binding motif, but lacks the conserved active site residues. NmrA is a negative transcriptional regulator of various fungi, involved in the post-translational modulation of the GATA-type transcription factor AreA. NmrA lacks the canonical GXXGXXG NAD-binding motif and has altered residues at the catalytic triad, including a Met instead of the critical Tyr residue. NmrA may bind nucleotides but appears to lack any dehydrogenase activity. HSCARG has been identified as a putative NADP-sensing molecule, and redistributes and restructures in response to NADPH/NADP ratios. Like NmrA, it lacks most of the active site residues of the SDR family, but has an NAD(P)-binding motif similar to the extended SDR family, GXXGXXG. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Atypical SDRs are distinct from classical SDRs. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 259

>gnl|CDD|187538 cd05227, AR_SDR_e, aldehyde reductase, extended (e) SDRs

 Score = 50.3 bits (121), Expect = 5e-07
 Identities = 55/253 (21%), Positives = 94/253 (37%), Gaps = 40/253 (15%)

Query: 52  TVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELI---FPGKKTR----FFPGVMI 104
            V VTGATGFI   +V++L    ++VR   RS SK+  +              F     +
Sbjct: 1   LVLVTGATGFIASHIVEQLLKAGYKVRGTVRSLSKSAKLKALLKAAGYNDRLEFVIVDDL 60

Query: 105 AEEPQWRDCIQGSTAVVNLAG-TPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVR 163
                W + ++G   V+++A   P       + + ++ +  +  T  V++    +   V+
Sbjct: 61  TAPNAWDEALKGVDYVIHVASPFPFTG---PDAEDDVIDPAVEGTLNVLEAAKAAG-SVK 116

Query: 164 PSVLVSATA--LGYYGTSETEVFDESS------PSGNDYLA----EVCRE---WEGTALK 208
             VL S+ A           +VF E           N   A    +   E   WE   +K
Sbjct: 117 RVVLTSSVAAVGDPTAEDPGKVFTEEDWNDLTISKSNGLDAYIASKTLAEKAAWE--FVK 174

Query: 209 VNKD-VRLALIRIGIVLG-----KDGGALAKMIPLFMMFAGGPLGSGQQ--WFSWIHLDD 260
            NK    L  I  G VLG      +  +  ++I        G L +      F ++ + D
Sbjct: 175 ENKPKFELITINPGYVLGPSLLADELNSSNELI---NKLLDGKLPAIPPNLPFGYVDVRD 231

Query: 261 IVNLIYEALSNPS 273
           + +    AL +P 
Sbjct: 232 VADAHVRALESPE 244

This subgroup contains aldehyde reductase of the extended SDR-type and related proteins. Aldehyde reductase I (aka carbonyl reductase) is an NADP-binding SDR; it has an NADP-binding motif consensus that is slightly different from the canonical SDR form and lacks the Asn of the extended SDR active site tetrad. Aldehyde reductase I catalyzes the NADP-dependent reduction of ethyl 4-chloro-3-oxobutanoate to ethyl (R)-4-chloro-3-hydroxybutanoate. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 301

>gnl|CDD|187566 cd05256, UDP_AE_SDR_e, UDP-N-acetylglucosamine 4-epimerase, extended (e) SDRs

 Score = 48.4 bits (116), Expect = 2e-06
 Identities = 63/264 (23%), Positives = 104/264 (39%), Gaps = 29/264 (10%)

Query: 55  VTGATGFIGRRLVQRLQADNHQVRVLTR-SRSKAELIFPGK-KTRFFPGVMIAEEPQWRD 112
           VTG  GFIG  LV+RL    H+V VL   S  K E +   K   +F  G  I ++     
Sbjct: 4   VTGGAGFIGSHLVERLLERGHEVIVLDNLSTGKKENLPEVKPNVKFIEG-DIRDDELVEF 62

Query: 113 CIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATA 172
             +G   V + A        S  I+  IK+  + V   +  L      GV+   + ++++
Sbjct: 63  AFEGVDYVFHQAAQA-SVPRS--IEDPIKDHEVNVLGTLNLLEAARKAGVK-RFVYASSS 118

Query: 173 LGYYGTSETEVFDESSPSGND-------YLAEV-CREWEGTALKVNKDVRLALIRIGIVL 224
              YG       DE  P           Y  E+ C+ +     ++     ++L R   V 
Sbjct: 119 -SVYGDPPYLPKDEDHPPNPLSPYAVSKYAGELYCQVFA----RLYGLPTVSL-RYFNVY 172

Query: 225 GK---DGGALAKMIPLFM--MFAGGPL---GSGQQWFSWIHLDDIVNLIYEALSNPSYRG 276
           G      G  A +IP+F+     G P    G G+Q   + +++D+V     A +  +   
Sbjct: 173 GPRQDPNGGYAAVIPIFIERALKGEPPTIYGDGEQTRDFTYVEDVVEANLLAATAGAGGE 232

Query: 277 VINGTAPNPVRLAEMCDHLGNVLG 300
           V N        + E+ + +  +LG
Sbjct: 233 VYNIGTGKRTSVNELAELIREILG 256

This subgroup contains UDP-N-acetylglucosamine 4-epimerase of Pseudomonas aeruginosa, WbpP, an extended SDR, that catalyzes the NAD+ dependent conversion of UDP-GlcNAc and UDPGalNA to UDP-Glc and UDP-Gal. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 304

>gnl|CDD|187556 cd05245, SDR_a2, atypical (a) SDRs, subgroup 2

 Score = 47.7 bits (114), Expect = 3e-06
 Identities = 21/34 (61%), Positives = 24/34 (70%)

Query: 53 VSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSK 86
          V VTGATG++G RLV RL  + HQVR L RS  K
Sbjct: 1  VLVTGATGYVGGRLVPRLLQEGHQVRALVRSPEK 34

This subgroup contains atypical SDRs, one member is identified as Escherichia coli protein ybjT, function unknown. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine-rich NAD(P)-binding motif consensus that generally matches the extended SDRs, TGXXGXXG, but lacks the characteristic active site residues of the SDRs. This subgroup has basic residues (HXXXR) in place of the active site motif YXXXK, these may have a catalytic role. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 293

>gnl|CDD|163279 TIGR03466, HpnA, hopanoid-associated sugar epimerase

 Score = 47.3 bits (113), Expect = 5e-06
 Identities = 18/38 (47%), Positives = 22/38 (57%)

Query: 51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAE 88
          M V VTGATGF+G  +V+ L     +VRVL R  S   
Sbjct: 1  MKVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSDRR 38

The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene. This gene and its association with hopene biosynthesis in Zymomonas mobilis has been noted in the literature where the gene symbol hpnA was assigned. Hopanoids are known to be components of the plasma membrane and to have polar sugar head groups in Z. mobilis and other species. Length = 328

>gnl|CDD|235962 PRK07201, PRK07201, short chain dehydrogenase; Provisional

 Score = 46.5 bits (111), Expect = 1e-05
 Identities = 21/41 (51%), Positives = 24/41 (58%), Gaps = 2/41 (4%)

Query: 51 MTVSVTGATGFIGRRLVQRL--QADNHQVRVLTRSRSKAEL 89
          M   VTG TGFIGRRLV RL  +     V VL R +S + L
Sbjct: 1  MRYFVTGGTGFIGRRLVSRLLDRRREATVHVLVRRQSLSRL 41

Length = 657

>gnl|CDD|178256 PLN02650, PLN02650, dihydroflavonol-4-reductase

 Score = 46.0 bits (109), Expect = 2e-05
 Identities = 33/83 (39%), Positives = 42/83 (50%), Gaps = 7/83 (8%)

Query: 52  TVSVTGATGFIGRRLVQRLQADNHQVRVLTRS-----RSKAELIFPGKKTRF-FPGVMIA 105
           TV VTGA+GFIG  LV RL    + VR   R      + K  L  PG  TR       +A
Sbjct: 7   TVCVTGASGFIGSWLVMRLLERGYTVRATVRDPANVKKVKHLLDLPGATTRLTLWKADLA 66

Query: 106 EEPQWRDCIQGSTAVVNLAGTPI 128
            E  + D I+G T V ++A TP+
Sbjct: 67  VEGSFDDAIRGCTGVFHVA-TPM 88

Length = 351

>gnl|CDD|187574 cd05264, UDP_G4E_5_SDR_e, UDP-glucose 4-epimerase (G4E), subgroup 5, extended (e) SDRs

 Score = 45.4 bits (108), Expect = 2e-05
 Identities = 59/278 (21%), Positives = 95/278 (34%), Gaps = 53/278 (19%)

Query: 53  VSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVM--IAEEPQW 110
           V + G  GFIG  LV  L  +  QVRV    RS      P     +  G     A+    
Sbjct: 2   VLIVGGNGFIGSHLVDALLEEGPQVRVF--DRSIPPYELPLGGVDYIKGDYENRAD---L 56

Query: 111 RDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSA 170
              + G   V++LA T      +     +I ++ +  T ++++       G+   +  S 
Sbjct: 57  ESALVGIDTVIHLASTTNPATSNKNPILDI-QTNVAPTVQLLEACAA--AGIGKIIFAS- 112

Query: 171 TALGYYGTSETEVFDESSPS------------------------GNDYLAEVCREWE--G 204
           +    YG  E     ES P+                        G DY   V R     G
Sbjct: 113 SGGTVYGVPEQLPISESDPTLPISSYGISKLAIEKYLRLYQYLYGLDYT--VLRISNPYG 170

Query: 205 TALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNL 264
              + +    +    I I L K    + +  P+         G G+    +I++DD+V  
Sbjct: 171 PGQRPDGKQGV----IPIALNK----ILRGEPI------EIWGDGESIRDYIYIDDLVEA 216

Query: 265 IYEALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRP 302
           +   L +     V N  +     LAE+   +  V GR 
Sbjct: 217 LMALLRSKGLEEVFNIGSGIGYSLAELIAEIEKVTGRS 254

This subgroup partially conserves the characteristic active site tetrad and NAD-binding motif of the extended SDRs, and has been identified as possible UDP-glucose 4-epimerase (aka UDP-galactose 4-epimerase), a homodimeric member of the extended SDR family. UDP-glucose 4-epimerase catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 300

>gnl|CDD|187569 cd05259, PCBER_SDR_a, phenylcoumaran benzylic ether reductase (PCBER) like, atypical (a) SDRs

 Score = 45.0 bits (107), Expect = 3e-05
 Identities = 21/78 (26%), Positives = 33/78 (42%), Gaps = 2/78 (2%)

Query: 52  TVSVTGATGFIGRRLVQRL-QADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQW 110
            +++ GATG +G  +V  L  +    V VLTR  S +   F     +  P V  A     
Sbjct: 1   KIAIAGATGTLGGPIVSALLASPGFTVTVLTRPSSTSSNEFQPSGVKVVP-VDYASHESL 59

Query: 111 RDCIQGSTAVVNLAGTPI 128
              ++G  AV++  G   
Sbjct: 60  VAALKGVDAVISALGGAA 77

PCBER and pinoresinol-lariciresinol reductases are NADPH-dependent aromatic alcohol reductases, and are atypical members of the SDR family. Other proteins in this subgroup are identified as eugenol synthase. These proteins contain an N-terminus characteristic of NAD(P)-binding proteins and a small C-terminal domain presumed to be involved in substrate binding, but they do not have the conserved active site Tyr residue typically found in SDRs. Numerous other members have unknown functions. The glycine rich NADP-binding motif in this subgroup is of 2 forms: GXGXXG and G[GA]XGXXG; it tends to be atypical compared with the forms generally seen in classical or extended SDRs. The usual SDR active site tetrad is not present, but a critical active site Lys at the usual SDR position has been identified in various members, though other charged and polar residues are found at this position in this subgroup. Atypical SDR-related proteins retain the Rossmann fold of the SDRs, but have limited sequence identity and generally lack the catalytic properties of the archetypical members. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 282

>gnl|CDD|187567 cd05257, Arna_like_SDR_e, Arna decarboxylase_like, extended (e) SDRs

 Score = 45.0 bits (107), Expect = 3e-05
 Identities = 38/149 (25%), Positives = 55/149 (36%), Gaps = 22/149 (14%)

Query: 52  TVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAE---LIFPGKKT-RFFPG-VMIAE 106
            V VTGA GFIG  L +RL  + H+VR L    S      L         F  G V  A 
Sbjct: 1   NVLVTGADGFIGSHLTERLLREGHEVRALDIYNSFNSWGLLDNAVHDRFHFISGDVRDAS 60

Query: 107 EPQWRDCIQGSTAVVNLAGTPIG-----TRWSSEIKKEIKESRIRVTSKVVDLINESPEG 161
           E      ++    V +LA   I      T   S ++  +  +   + +  V         
Sbjct: 61  E--VEYLVKKCDVVFHLA-ALIAIPYSYTAPLSYVETNVFGTLNVLEAACV-------LY 110

Query: 162 VRPSVLVSATALGYYGTSETEVFDESSPS 190
            +  V  S + +  YGT++    DE  P 
Sbjct: 111 RKRVVHTSTSEV--YGTAQDVPIDEDHPL 137

Decarboxylase domain of ArnA. ArnA, is an enzyme involved in the modification of outer membrane protein lipid A of gram-negative bacteria. It is a bifunctional enzyme that catalyzes the NAD-dependent decarboxylation of UDP-glucuronic acid and N-10-formyltetrahydrofolate-dependent formylation of UDP-4-amino-4-deoxy-l-arabinose; its NAD-dependent decaboxylating activity is in the C-terminal 360 residues. This subgroup belongs to the extended SDR family, however the NAD binding motif is not a perfect match and the upstream Asn of the canonical active site tetrad is not conserved. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 316

>gnl|CDD|187578 cd05269, TMR_SDR_a, triphenylmethane reductase (TMR)-like proteins, NMRa-like, atypical (a) SDRs

 Score = 43.4 bits (103), Expect = 8e-05
 Identities = 18/48 (37%), Positives = 22/48 (45%), Gaps = 7/48 (14%)

Query: 55  VTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGV 102
           VTGATG +G  +V+ L A    V  L R+  KA       K     GV
Sbjct: 3   VTGATGKLGTAVVELLLAKVASVVALVRNPEKA-------KAFAADGV 43

TMR is an atypical NADP-binding protein of the SDR family. It lacks the active site residues of the SDRs but has a glycine rich NAD(P)-binding motif that matches the extended SDRs. Proteins in this subgroup however, are more similar in length to the classical SDRs. TMR was identified as a reducer of triphenylmethane dyes, important environmental pollutants. This subgroup also includes Escherichia coli NADPH-dependent quinine oxidoreductase (QOR2), which catalyzes two-electron reduction of quinone; but is unlikely to play a major role in protecting against quinone cytotoxicity. Atypical SDRs are distinct from classical SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 272

>gnl|CDD|187540 cd05229, SDR_a3, atypical (a) SDRs, subgroup 3

 Score = 41.5 bits (98), Expect = 3e-04
 Identities = 23/82 (28%), Positives = 34/82 (41%), Gaps = 5/82 (6%)

Query: 52  TVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWR 111
           T  V GA+G IGR + + L+     VR+++RS SK                M A      
Sbjct: 1   TAHVLGASGPIGREVARELRRRGWDVRLVSRSGSKLAW--LPGVEIVAADAMDAS--SVI 56

Query: 112 DCIQGSTAVVNLAGTPIGTRWS 133
              +G+  + + A  P  TRW 
Sbjct: 57  AAARGADVIYHCAN-PAYTRWE 77

These atypical SDR family members of unknown function have a glycine-rich NAD(P)-binding motif consensus that is very similar to the extended SDRs, GXXGXXG. Generally, this group has poor conservation of the active site tetrad, However, individual sequences do contain matches to the YXXXK active site motif, and generally Tyr or Asn in place of the upstream Ser found in most SDRs. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 302

>gnl|CDD|233557 TIGR01746, Thioester-redct, thioester reductase domain

 Score = 41.2 bits (97), Expect = 6e-04
 Identities = 15/37 (40%), Positives = 24/37 (64%)

Query: 52 TVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAE 88
          TV +TGATGF+G  L++ L   + Q +V+   R+ +E
Sbjct: 1  TVLLTGATGFLGAYLLEELLRRSTQAKVICLVRAASE 37

This model includes the terminal domain from the fungal alpha aminoadipate reductase enzyme (also known as aminoadipate semialdehyde dehydrogenase) which is involved in the biosynthesis of lysine , as well as the reductase-containing component of the myxochelin biosynthetic gene cluster, MxcG. The mechanism of reduction involves activation of the substrate by adenylation and transfer to a covalently-linked pantetheine cofactor as a thioester. This thioester is then reduced to give an aldehyde (thus releasing the product) and a regenerated pantetheine thiol. (In myxochelin biosynthesis this aldehyde is further reduced to an alcohol or converted to an amine by an aminotransferase.) This is a fundamentally different reaction than beta-ketoreductase domains of polyketide synthases which act at a carbonyl two carbons removed from the thioester and forms an alcohol as a product. This domain is invariably found at the C-terminus of the proteins which contain it (presumably because it results in the release of the product). The majority of hits to this model are non-ribosomal peptide synthetases in which this domain is similarly located proximal to a thiolation domain (pfam00550). In some cases this domain is found at the end of a polyketide synthetase enzyme, but is unlike ketoreductase domains which are found before the thiolase domains. Exceptions to this observed relationship with the thiolase domain include three proteins which consist of stand-alone reductase domains (GP|466833 from M. leprae, GP|435954 from Anabaena and OMNI|NTL02SC1199 from Strep. coelicolor) and one protein (OMNI|NTL01NS2636 from Nostoc) which contains N-terminal homology with a small group of hypothetical proteins but no evidence of a thiolation domain next to the putative reductase domain. Below the noise cutoff to this model are proteins containing more distantly related ketoreductase and dehydratase/epimerase domains. It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold. Length = 367

>gnl|CDD|187571 cd05261, CAPF_like_SDR_e, capsular polysaccharide assembling protein (CAPF) like, extended (e) SDRs

 Score = 40.4 bits (95), Expect = 7e-04
 Identities = 32/133 (24%), Positives = 56/133 (42%), Gaps = 31/133 (23%)

Query: 51  MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQW 110
           M + +TGA GFIG+ L+ RL+       +    R                    ++E + 
Sbjct: 1   MKILITGAKGFIGKNLIARLKEQKD-DDIFFYDRE-------------------SDESEL 40

Query: 111 RDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVS- 169
            D +QG+  + +LAG     R   E   E +   + +T +++D +  +  G +P +L+S 
Sbjct: 41  DDFLQGADFIFHLAGV---NRPKDE--AEFESGNVGLTERLLDALTRN--GKKPPILLSS 93

Query: 170 ---ATALGYYGTS 179
              A     YG S
Sbjct: 94  SIQAALDNPYGKS 106

This subgroup of extended SDRs, includes some members which have been identified as capsular polysaccharide assembling proteins, such as Staphylococcus aureus Cap5F which is involved in the biosynthesis of N-acetyl-l-fucosamine, a constituent of surface polysaccharide structures of S. aureus. This subgroup has the characteristic active site tetrad and NAD-binding motif of extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 248

>gnl|CDD|187549 cd05238, Gne_like_SDR_e, Escherichia coli Gne (a nucleoside-diphosphate-sugar 4-epimerase)-like, extended (e) SDRs

 Score = 40.4 bits (95), Expect = 8e-04
 Identities = 14/30 (46%), Positives = 22/30 (73%)

Query: 51 MTVSVTGATGFIGRRLVQRLQADNHQVRVL 80
          M V +TGA+GF+G+RL +RL +D    R++
Sbjct: 1  MKVLITGASGFVGQRLAERLLSDVPNERLI 30

Nucleoside-diphosphate-sugar 4-epimerase has the characteristic active site tetrad and NAD-binding motif of the extended SDR, and is related to more specifically defined epimerases such as UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), which catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup includes Escherichia coli 055:H7 Gne, a UDP-GlcNAc 4-epimerase, essential for O55 antigen synthesis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 305

>gnl|CDD|219687 pfam07993, NAD_binding_4, Male sterility protein

 Score = 39.9 bits (94), Expect = 0.001
 Identities = 11/36 (30%), Positives = 21/36 (58%), Gaps = 2/36 (5%)

Query: 55 VTGATGFIGRRLVQRL--QADNHQVRVLTRSRSKAE 88
          +TGATGF+G+ L+++L       ++  L R++    
Sbjct: 1  LTGATGFLGKVLLEKLLRSTPEVKIYCLVRAKDGES 36

This family represents the C-terminal region of the male sterility protein in a number of arabidopsis and drosophila. A sequence-related jojoba acyl CoA reductase is also included. Length = 245

>gnl|CDD|191263 pfam05368, NmrA, NmrA-like family

 Score = 39.9 bits (94), Expect = 0.001
 Identities = 15/38 (39%), Positives = 20/38 (52%), Gaps = 1/38 (2%)

Query: 53 VSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELI 90
          + V GATG+ G  +V+      H VR L R   K+EL 
Sbjct: 1  ILVFGATGYQGGSVVRASLKAGHPVRALVRD-PKSELA 37

NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families. Length = 232

>gnl|CDD|178567 PLN02986, PLN02986, cinnamyl-alcohol dehydrogenase family protein

 Score = 40.0 bits (93), Expect = 0.001
 Identities = 65/257 (25%), Positives = 109/257 (42%), Gaps = 40/257 (15%)

Query: 53  VSVTGATGFIGRRLVQRLQADNHQVRVLTR---SRSKAE--LIFPGKKTR--FFPGVMIA 105
           V VTGA+G+I   +V+ L    + V+   R    R K E  L   G K R   F   ++ 
Sbjct: 8   VCVTGASGYIASWIVKLLLLRGYTVKATVRDLTDRKKTEHLLALDGAKERLKLFKADLL- 66

Query: 106 EEPQWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPS 165
           EE  +   I+G  AV + A     T    + + E+ +  ++ T  V++   E+P  V+  
Sbjct: 67  EESSFEQAIEGCDAVFHTASPVFFT--VKDPQTELIDPALKGTINVLNTCKETPS-VKRV 123

Query: 166 VLVSATALGYY---GTSETEVFDE---SSPSGNDYLAEVCRE---W--------EGTALK 208
           +L S+TA   +        +V DE   S PS       +CRE   W        E  A +
Sbjct: 124 ILTSSTAAVLFRQPPIEANDVVDETFFSDPS-------LCRETKNWYPLSKILAENAAWE 176

Query: 209 VNKD--VRLALIRIGIVLGK-DGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLI 265
             KD  + + ++  G + G      L   + L + F  G      +++ ++ + D+    
Sbjct: 177 FAKDNGIDMVVLNPGFICGPLLQPTLNFSVELIVDFINGKNLFNNRFYRFVDVRDVALAH 236

Query: 266 YEALSNPSYRG--VING 280
            +AL  PS  G  +I+G
Sbjct: 237 IKALETPSANGRYIIDG 253

Length = 322

>gnl|CDD|187536 cd05193, AR_like_SDR_e, aldehyde reductase, flavonoid reductase, and related proteins, extended (e) SDRs

 Score = 39.9 bits (93), Expect = 0.001
 Identities = 60/266 (22%), Positives = 99/266 (37%), Gaps = 46/266 (17%)

Query: 53  VSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPG------VMIAE 106
           V VTGA+GF+   +V++L    ++VR   R  SK + +         PG        + +
Sbjct: 1   VLVTGASGFVASHVVEQLLERGYKVRATVRDPSKVKKVNHLLDLDAKPGRLELAVADLTD 60

Query: 107 EPQWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSV 166
           E  + + I+G   V ++A TP+   +SS+   E+ +  I  T   +     +   V+  V
Sbjct: 61  EQSFDEVIKGCAGVFHVA-TPV--SFSSKDPNEVIKPAIGGTLNALKAAAAAKS-VKRFV 116

Query: 167 LVS--ATALGYYGTSETEVFDESSPSGNDYLAEVCRE-----W---------EGTALKVN 210
           L S   + L      E  V DE S +    L E   +     W         E  A K  
Sbjct: 117 LTSSAGSVLIPKPNVEGIVLDEKSWN----LEEFDSDPKKSAWVYAASKTLAEKAAWKFA 172

Query: 211 KDVRLALIRI------GIVLGKDGGA---LAKMIP---LFMMFAGGPLGSGQQWFSWIHL 258
            +  + LI +      G +   +  +    A  +      +  A   +  G     ++H+
Sbjct: 173 DENNIDLITVIPTLTIGTIFDSETPSSSGWAMSLITGNEGVSPALALIPPGY----YVHV 228

Query: 259 DDIVNLIYEALSNPSYRGVINGTAPN 284
            DI       L  P  RG    TA N
Sbjct: 229 VDICLAHIGCLELPIARGRYICTAGN 254

This subgroup contains aldehyde reductase and flavonoid reductase of the extended SDR-type and related proteins. Proteins in this subgroup have a complete SDR-type active site tetrad and a close match to the canonical extended SDR NADP-binding motif. Aldehyde reductase I (aka carbonyl reductase) is an NADP-binding SDR; it catalyzes the NADP-dependent reduction of ethyl 4-chloro-3-oxobutanoate to ethyl (R)-4-chloro-3-hydroxybutanoate. The related flavonoid reductases act in the NADP-dependent reduction of flavonoids, ketone-containing plant secondary metabolites. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 295

>gnl|CDD|216283 pfam01073, 3Beta_HSD, 3-beta hydroxysteroid dehydrogenase/isomerase family

 Score = 39.6 bits (93), Expect = 0.001
 Identities = 20/74 (27%), Positives = 33/74 (44%), Gaps = 3/74 (4%)

Query: 55  VTGATGFIGRRLVQRL-QADNHQ-VRVLTRS-RSKAELIFPGKKTRFFPGVMIAEEPQWR 111
           VTG  GF+GR +V+ L +    Q VRV       +    F   +   +    + ++   R
Sbjct: 2   VTGGGGFLGRHIVRLLLREGELQEVRVFDLRFSPELLEDFSKLQVITYIEGDVTDKQDLR 61

Query: 112 DCIQGSTAVVNLAG 125
             +QGS  V++ A 
Sbjct: 62  RALQGSDVVIHTAA 75

The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyzes the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones. Length = 280

>gnl|CDD|178263 PLN02657, PLN02657, 3,8-divinyl protochlorophyllide a 8-vinyl reductase

 Score = 39.7 bits (93), Expect = 0.002
 Identities = 20/78 (25%), Positives = 34/78 (43%)

Query: 9  STLTWSQSISPCLHSSAKPFSRCEAKKFRVFCTSDHTQKASQMTVSVTGATGFIGRRLVQ 68
           +   + S+   L   A   SR           S  +++   +TV V GATG+IG+ +V+
Sbjct: 19 PSNRLAASLGGALVRRAAAASRGSRATAAAAAQSFRSKEPKDVTVLVVGATGYIGKFVVR 78

Query: 69 RLQADNHQVRVLTRSRSK 86
           L    + V  + R +S 
Sbjct: 79 ELVRRGYNVVAVAREKSG 96

Length = 390

>gnl|CDD|181044 PRK07577, PRK07577, short chain dehydrogenase; Provisional

 Score = 37.8 bits (88), Expect = 0.004
 Identities = 20/43 (46%), Positives = 22/43 (51%), Gaps = 3/43 (6%)

Query: 52 TVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGK 94
          TV VTGAT  IG  L  RL    HQV  + RS       FPG+
Sbjct: 5  TVLVTGATKGIGLALSLRLANLGHQVIGIARSAIDD---FPGE 44

Length = 234

>gnl|CDD|187564 cd05254, dTDP_HR_like_SDR_e, dTDP-6-deoxy-L-lyxo-4-hexulose reductase and related proteins, extended (e) SDRs

 Score = 38.0 bits (89), Expect = 0.004
 Identities = 14/36 (38%), Positives = 22/36 (61%)

Query: 55 VTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELI 90
          +TGATG +GR LV+ L+   ++V    RSR+    +
Sbjct: 4  ITGATGMLGRALVRLLKERGYEVIGTGRSRASLFKL 39

dTDP-6-deoxy-L-lyxo-4-hexulose reductase, an extended SDR, synthesizes dTDP-L-rhamnose from alpha-D-glucose-1-phosphate, providing the precursor of L-rhamnose, an essential cell wall component of many pathogenic bacteria. This subgroup has the characteristic active site tetrad and NADP-binding motif. This subgroup also contains human MAT2B, the regulatory subunit of methionine adenosyltransferase (MAT); MAT catalyzes S-adenosylmethionine synthesis. The human gene encoding MAT2B encodes two major splicing variants which are induced in human cell liver cancer and regulate HuR, an mRNA-binding protein which stabilizes the mRNA of several cyclins, to affect cell proliferation. Both MAT2B variants include this extended SDR domain. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 280

>gnl|CDD|187561 cd05251, NmrA_like_SDR_a, NmrA (a transcriptional regulator) and HSCARG (an NADPH sensor) like proteins, atypical (a) SDRs

 Score = 38.0 bits (89), Expect = 0.004
 Identities = 20/55 (36%), Positives = 26/55 (47%), Gaps = 6/55 (10%)

Query: 53  VSVTGATGFIGRRLVQRLQADN-HQVRVLTRSRSKAELIFPGKKTRFFPGVMIAE 106
           + V GATG  G  +V+ L  D   +VR LTR  S      P  K    PGV + +
Sbjct: 1   ILVFGATGKQGGSVVRALLKDPGFKVRALTRDPSS-----PAAKALAAPGVEVVQ 50

NmrA and HSCARG like proteins. NmrA is a negative transcriptional regulator of various fungi, involved in the post-translational modulation of the GATA-type transcription factor AreA. NmrA lacks the canonical GXXGXXG NAD-binding motif and has altered residues at the catalytic triad, including a Met instead of the critical Tyr residue. NmrA may bind nucleotides but appears to lack any dehydrogenase activity. HSCARG has been identified as a putative NADP-sensing molecule, and redistributes and restructures in response to NADPH/NADP ratios. Like NmrA, it lacks most of the active site residues of the SDR family, but has an NAD(P)-binding motif similar to the extended SDR family, GXXGXXG. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Atypical SDRs are distinct from classical SDRs. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 242

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	355
COG1090	297	Predicted nucleoside-diphosphate sugar epimerase [	100.0
COG1087	329	GalE UDP-glucose 4-epimerase [Cell envelope biogen	100.0
PRK15181	348	Vi polysaccharide biosynthesis protein TviC; Provi	100.0
COG1088	340	RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope	100.0
TIGR01777	292	yfcH conserved hypothetical protein TIGR01777. Thi	100.0
PLN02166	436	dTDP-glucose 4,6-dehydratase	100.0
KOG1502	327	consensus Flavonol reductase/cinnamoyl-CoA reducta	100.0
PLN02427	386	UDP-apiose/xylose synthase	100.0
PLN02572	442	UDP-sulfoquinovose synthase	100.0
PRK11908	347	NAD-dependent epimerase/dehydratase family protein	100.0
PLN02206	442	UDP-glucuronate decarboxylase	100.0
PLN02214	342	cinnamoyl-CoA reductase	100.0
PLN02695	370	GDP-D-mannose-3',5'-epimerase	100.0
PRK10217	355	dTDP-glucose 4,6-dehydratase; Provisional	100.0
PRK11150	308	rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro	100.0
KOG1429	350	consensus dTDP-glucose 4-6-dehydratase/UDP-glucuro	100.0
TIGR01472	343	gmd GDP-mannose 4,6-dehydratase. Excluded from thi	100.0
PLN02989	325	cinnamyl-alcohol dehydrogenase family protein	100.0
PRK08125	660	bifunctional UDP-glucuronic acid decarboxylase/UDP	100.0
PLN02725	306	GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas	100.0
PLN00198	338	anthocyanidin reductase; Provisional	100.0
PLN02662	322	cinnamyl-alcohol dehydrogenase family protein	100.0
PLN02986	322	cinnamyl-alcohol dehydrogenase family protein	100.0
PLN02650	351	dihydroflavonol-4-reductase	100.0
KOG0747	331	consensus Putative NAD+-dependent epimerases [Carb	100.0
PLN02653	340	GDP-mannose 4,6-dehydratase	100.0
TIGR02622	349	CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member	100.0
PRK09987	299	dTDP-4-dehydrorhamnose reductase; Provisional	100.0
COG0451	314	WcaG Nucleoside-diphosphate-sugar epimerases [Cell	100.0
PLN02260	668	probable rhamnose biosynthetic enzyme	100.0
PRK10084	352	dTDP-glucose 4,6 dehydratase; Provisional	100.0
PLN02896	353	cinnamyl-alcohol dehydrogenase	100.0
PLN02240	352	UDP-glucose 4-epimerase	100.0
TIGR03466	328	HpnA hopanoid-associated sugar epimerase. The sequ	100.0
PRK10675	338	UDP-galactose-4-epimerase; Provisional	100.0
PF01073	280	3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso	100.0
TIGR01214	287	rmlD dTDP-4-dehydrorhamnose reductase. This enzyme	100.0
TIGR02197	314	heptose_epim ADP-L-glycero-D-manno-heptose-6-epime	100.0
TIGR01181	317	dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This	100.0
PLN00016	378	RNA-binding protein; Provisional	100.0
KOG1371	343	consensus UDP-glucose 4-epimerase/UDP-sulfoquinovo	100.0
COG1091	281	RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo	100.0
TIGR01179	328	galE UDP-glucose-4-epimerase. This enzyme intercon	100.0
PF04321	286	RmlD_sub_bind: RmlD substrate binding domain; Inte	100.0
PLN02686	367	cinnamoyl-CoA reductase	100.0
TIGR03589	324	PseB UDP-N-acetylglucosamine 4,6-dehydratase. This	100.0
CHL00194	317	ycf39 Ycf39; Provisional	99.98
PLN02583	297	cinnamoyl-CoA reductase	99.97
KOG1431	315	consensus GDP-L-fucose synthetase [Carbohydrate tr	99.97
PF01370	236	Epimerase: NAD dependent epimerase/dehydratase fam	99.97
KOG1430	361	consensus C-3 sterol dehydrogenase/3-beta-hydroxys	99.97
PRK05865	854	hypothetical protein; Provisional	99.97
PLN02778	298	3,5-epimerase/4-reductase	99.97
KOG3019	315	consensus Predicted nucleoside-diphosphate sugar e	99.97
PLN02657	390	3,8-divinyl protochlorophyllide a 8-vinyl reductas	99.96
PLN02996	491	fatty acyl-CoA reductase	99.96
PRK07201	657	short chain dehydrogenase; Provisional	99.96
COG1089	345	Gmd GDP-D-mannose dehydratase [Cell envelope bioge	99.95
TIGR01746	367	Thioester-redct thioester reductase domain. It has	99.94
TIGR03649	285	ergot_EASG ergot alkaloid biosynthesis protein, AF	99.94
PLN02260	668	probable rhamnose biosynthetic enzyme	99.93
PF02719	293	Polysacc_synt_2: Polysaccharide biosynthesis prote	99.93
PRK12320	699	hypothetical protein; Provisional	99.93
COG1086	588	Predicted nucleoside-diphosphate sugar epimerases	99.92
PLN02503	605	fatty acyl-CoA reductase 2	99.91
PF13460	183	NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X	99.9
PLN00141	251	Tic62-NAD(P)-related group II protein; Provisional	99.9
KOG2865	391	consensus NADH:ubiquinone oxidoreductase, NDUFA9/3	99.9
PRK06482	276	short chain dehydrogenase; Provisional	99.89
PLN03209	576	translocon at the inner envelope of chloroplast su	99.87
PF07993	249	NAD_binding_4: Male sterility protein; InterPro: I	99.86
TIGR03443	1389	alpha_am_amid L-aminoadipate-semialdehyde dehydrog	99.86
KOG1372	376	consensus GDP-mannose 4,6 dehydratase [Carbohydrat	99.85
PRK13394	262	3-hydroxybutyrate dehydrogenase; Provisional	99.85
PRK12825	249	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.84
PRK12826	251	3-ketoacyl-(acyl-carrier-protein) reductase; Revie	99.84
PRK08263	275	short chain dehydrogenase; Provisional	99.84
PRK05875	276	short chain dehydrogenase; Provisional	99.83
COG3320	382	Putative dehydrogenase domain of multifunctional n	99.83
PRK09135	249	pteridine reductase; Provisional	99.83
PRK06180	277	short chain dehydrogenase; Provisional	99.83
TIGR01963	255	PHB_DH 3-hydroxybutyrate dehydrogenase. This model	99.82
PRK07067	257	sorbitol dehydrogenase; Provisional	99.82
PRK07775	274	short chain dehydrogenase; Provisional	99.82
PF05368	233	NmrA: NmrA-like family; InterPro: IPR008030 NmrA i	99.82
PRK12429	258	3-hydroxybutyrate dehydrogenase; Provisional	99.81
PRK07074	257	short chain dehydrogenase; Provisional	99.81
PRK05653	246	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.81
PRK06914	280	short chain dehydrogenase; Provisional	99.81
PRK07523	255	gluconate 5-dehydrogenase; Provisional	99.8
PRK06182	273	short chain dehydrogenase; Validated	99.8
PRK12829	264	short chain dehydrogenase; Provisional	99.8
PRK08219	227	short chain dehydrogenase; Provisional	99.8
PRK07774	250	short chain dehydrogenase; Provisional	99.79
PRK12746	254	short chain dehydrogenase; Provisional	99.79
PRK12745	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.79
PRK12823	260	benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat	99.78
PRK07806	248	short chain dehydrogenase; Provisional	99.78
COG2910	211	Putative NADH-flavin reductase [General function p	99.78
PRK12828	239	short chain dehydrogenase; Provisional	99.78
PRK12384	259	sorbitol-6-phosphate dehydrogenase; Provisional	99.78
PRK05876	275	short chain dehydrogenase; Provisional	99.78
PRK06128	300	oxidoreductase; Provisional	99.77
PRK12935	247	acetoacetyl-CoA reductase; Provisional	99.77
PRK08063	250	enoyl-(acyl carrier protein) reductase; Provisiona	99.77
PRK06077	252	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.76
PRK06179	270	short chain dehydrogenase; Provisional	99.76
PRK07231	251	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.76
TIGR03206	250	benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr	99.76
PRK07577	234	short chain dehydrogenase; Provisional	99.76
PRK06194	287	hypothetical protein; Provisional	99.76
PRK06138	252	short chain dehydrogenase; Provisional	99.76
PRK07890	258	short chain dehydrogenase; Provisional	99.76
PRK07060	245	short chain dehydrogenase; Provisional	99.76
PRK05993	277	short chain dehydrogenase; Provisional	99.75
COG4221	246	Short-chain alcohol dehydrogenase of unknown speci	99.75
PRK08220	252	2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated	99.75
PRK09186	256	flagellin modification protein A; Provisional	99.75
PRK12827	249	short chain dehydrogenase; Provisional	99.75
PRK12939	250	short chain dehydrogenase; Provisional	99.74
PLN02253	280	xanthoxin dehydrogenase	99.74
PRK05557	248	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.74
PRK06701	290	short chain dehydrogenase; Provisional	99.74
PRK10538	248	malonic semialdehyde reductase; Provisional	99.73
KOG1221	467	consensus Acyl-CoA reductase [Lipid transport and	99.73
PRK05717	255	oxidoreductase; Validated	99.73
PRK06101	240	short chain dehydrogenase; Provisional	99.73
PRK09134	258	short chain dehydrogenase; Provisional	99.73
PRK06841	255	short chain dehydrogenase; Provisional	99.73
PRK07024	257	short chain dehydrogenase; Provisional	99.73
PRK08628	258	short chain dehydrogenase; Provisional	99.73
PRK06500	249	short chain dehydrogenase; Provisional	99.73
KOG2774	366	consensus NAD dependent epimerase [General functio	99.73
PRK06523	260	short chain dehydrogenase; Provisional	99.72
PRK09291	257	short chain dehydrogenase; Provisional	99.72
COG0702	275	Predicted nucleoside-diphosphate-sugar epimerases	99.72
PRK07666	239	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.72
TIGR01832	248	kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod	99.72
PRK07825	273	short chain dehydrogenase; Provisional	99.72
PRK06196	315	oxidoreductase; Provisional	99.72
PRK06123	248	short chain dehydrogenase; Provisional	99.72
PRK12937	245	short chain dehydrogenase; Provisional	99.71
PRK12824	245	acetoacetyl-CoA reductase; Provisional	99.71
PRK07985	294	oxidoreductase; Provisional	99.71
PRK07326	237	short chain dehydrogenase; Provisional	99.71
PRK06181	263	short chain dehydrogenase; Provisional	99.71
PRK05650	270	short chain dehydrogenase; Provisional	99.71
PRK08324	681	short chain dehydrogenase; Validated	99.71
PRK06398	258	aldose dehydrogenase; Validated	99.71
PRK07856	252	short chain dehydrogenase; Provisional	99.71
PRK09730	247	putative NAD(P)-binding oxidoreductase; Provisiona	99.7
PRK06114	254	short chain dehydrogenase; Provisional	99.7
PRK08643	256	acetoin reductase; Validated	99.7
PRK05693	274	short chain dehydrogenase; Provisional	99.7
PRK08017	256	oxidoreductase; Provisional	99.7
PRK06113	255	7-alpha-hydroxysteroid dehydrogenase; Validated	99.7
PRK08213	259	gluconate 5-dehydrogenase; Provisional	99.69
TIGR01830	239	3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re	99.69
PRK07063	260	short chain dehydrogenase; Provisional	99.69
COG0300	265	DltE Short-chain dehydrogenases of various substra	99.69
PRK12936	245	3-ketoacyl-(acyl-carrier-protein) reductase NodG;	99.69
PRK12743	256	oxidoreductase; Provisional	99.69
PRK07814	263	short chain dehydrogenase; Provisional	99.69
PRK05565	247	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.69
PRK08642	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.69
PRK06550	235	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.69
PRK06463	255	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.69
PRK05866	293	short chain dehydrogenase; Provisional	99.69
PRK06124	256	gluconate 5-dehydrogenase; Provisional	99.69
PRK12744	257	short chain dehydrogenase; Provisional	99.69
PRK06057	255	short chain dehydrogenase; Provisional	99.69
PRK12747	252	short chain dehydrogenase; Provisional	99.69
PRK07454	241	short chain dehydrogenase; Provisional	99.69
PRK08085	254	gluconate 5-dehydrogenase; Provisional	99.69
PRK12742	237	oxidoreductase; Provisional	99.69
PRK07478	254	short chain dehydrogenase; Provisional	99.68
PRK08264	238	short chain dehydrogenase; Validated	99.68
PRK07102	243	short chain dehydrogenase; Provisional	99.68
PRK08265	261	short chain dehydrogenase; Provisional	99.67
PRK09242	257	tropinone reductase; Provisional	99.67
PRK06949	258	short chain dehydrogenase; Provisional	99.67
PRK08277	278	D-mannonate oxidoreductase; Provisional	99.67
PRK07453	322	protochlorophyllide oxidoreductase; Validated	99.67
PRK08339	263	short chain dehydrogenase; Provisional	99.67
PRK08267	260	short chain dehydrogenase; Provisional	99.67
PRK07109	334	short chain dehydrogenase; Provisional	99.67
PRK06947	248	glucose-1-dehydrogenase; Provisional	99.67
PRK06935	258	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	99.66
PRK06139	330	short chain dehydrogenase; Provisional	99.66
PRK07035	252	short chain dehydrogenase; Provisional	99.66
PRK12938	246	acetyacetyl-CoA reductase; Provisional	99.66
PRK06198	260	short chain dehydrogenase; Provisional	99.66
PRK08217	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.66
PRK12481	251	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	99.66
PRK08251	248	short chain dehydrogenase; Provisional	99.66
PRK07578	199	short chain dehydrogenase; Provisional	99.66
PRK07041	230	short chain dehydrogenase; Provisional	99.66
PRK08703	239	short chain dehydrogenase; Provisional	99.66
PRK06172	253	short chain dehydrogenase; Provisional	99.65
PRK07069	251	short chain dehydrogenase; Validated	99.65
PRK07904	253	short chain dehydrogenase; Provisional	99.65
PRK08589	272	short chain dehydrogenase; Validated	99.65
PRK05867	253	short chain dehydrogenase; Provisional	99.64
PRK06483	236	dihydromonapterin reductase; Provisional	99.64
PRK07677	252	short chain dehydrogenase; Provisional	99.64
PRK08226	263	short chain dehydrogenase; Provisional	99.63
PRK06171	266	sorbitol-6-phosphate 2-dehydrogenase; Provisional	99.63
PRK07097	265	gluconate 5-dehydrogenase; Provisional	99.63
PRK09072	263	short chain dehydrogenase; Provisional	99.63
PRK06079	252	enoyl-(acyl carrier protein) reductase; Provisiona	99.63
PRK07576	264	short chain dehydrogenase; Provisional	99.62
PRK12367	245	short chain dehydrogenase; Provisional	99.62
PRK06484	520	short chain dehydrogenase; Validated	99.62
PRK08993	253	2-deoxy-D-gluconate 3-dehydrogenase; Validated	99.62
PRK08416	260	7-alpha-hydroxysteroid dehydrogenase; Provisional	99.62
PRK06197	306	short chain dehydrogenase; Provisional	99.62
PRK05786	238	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.62
TIGR01829	242	AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy	99.62
PRK08278	273	short chain dehydrogenase; Provisional	99.61
PRK07832	272	short chain dehydrogenase; Provisional	99.61
TIGR02632	676	RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc	99.61
PRK05872	296	short chain dehydrogenase; Provisional	99.61
PRK08159	272	enoyl-(acyl carrier protein) reductase; Provisiona	99.61
PRK06953	222	short chain dehydrogenase; Provisional	99.61
PRK07831	262	short chain dehydrogenase; Provisional	99.61
PRK07023	243	short chain dehydrogenase; Provisional	99.6
TIGR02415	254	23BDH acetoin reductases. One member of this famil	99.6
PRK07062	265	short chain dehydrogenase; Provisional	99.6
PRK05884	223	short chain dehydrogenase; Provisional	99.6
PRK08340	259	glucose-1-dehydrogenase; Provisional	99.6
PRK12748	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.59
PRK06505	271	enoyl-(acyl carrier protein) reductase; Provisiona	99.59
PRK07424	406	bifunctional sterol desaturase/short chain dehydro	99.58
PRK08936	261	glucose-1-dehydrogenase; Provisional	99.58
PRK07533	258	enoyl-(acyl carrier protein) reductase; Provisiona	99.58
PRK06200	263	2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog	99.58
PRK07984	262	enoyl-(acyl carrier protein) reductase; Provisiona	99.58
PRK08690	261	enoyl-(acyl carrier protein) reductase; Provisiona	99.58
PRK08415	274	enoyl-(acyl carrier protein) reductase; Provisiona	99.58
PRK06997	260	enoyl-(acyl carrier protein) reductase; Provisiona	99.57
PRK06603	260	enoyl-(acyl carrier protein) reductase; Provisiona	99.57
KOG1203	411	consensus Predicted dehydrogenase [Carbohydrate tr	99.57
PRK08945	247	putative oxoacyl-(acyl carrier protein) reductase;	99.56
TIGR01831	239	fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas	99.56
PRK06924	251	short chain dehydrogenase; Provisional	99.56
PRK06125	259	short chain dehydrogenase; Provisional	99.56
PRK07370	258	enoyl-(acyl carrier protein) reductase; Validated	99.55
PRK07792	306	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.55
PRK08594	257	enoyl-(acyl carrier protein) reductase; Provisiona	99.55
PRK05854	313	short chain dehydrogenase; Provisional	99.54
PRK08177	225	short chain dehydrogenase; Provisional	99.54
PRK07791	286	short chain dehydrogenase; Provisional	99.53
PRK07201	657	short chain dehydrogenase; Provisional	99.53
PRK12859	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.52
PRK09009	235	C factor cell-cell signaling protein; Provisional	99.52
TIGR02685	267	pter_reduc_Leis pteridine reductase. Pteridine red	99.52
PRK06940	275	short chain dehydrogenase; Provisional	99.52
PRK05855	582	short chain dehydrogenase; Validated	99.51
TIGR03325	262	BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro	99.51
PRK07889	256	enoyl-(acyl carrier protein) reductase; Provisiona	99.5
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.49
KOG1205	282	consensus Predicted dehydrogenase [Secondary metab	99.49
PLN02780	320	ketoreductase/ oxidoreductase	99.48
PRK05599	246	hypothetical protein; Provisional	99.47
PRK06484	520	short chain dehydrogenase; Validated	99.46
TIGR01289	314	LPOR light-dependent protochlorophyllide reductase	99.43
smart00822	180	PKS_KR This enzymatic domain is part of bacterial	99.43
KOG4039	238	consensus Serine/threonine kinase TIP30/CC3 [Signa	99.41
PRK08303	305	short chain dehydrogenase; Provisional	99.36
KOG4288	283	consensus Predicted oxidoreductase [General functi	99.36
TIGR01500	256	sepiapter_red sepiapterin reductase. This model de	99.35
PLN02730	303	enoyl-[acyl-carrier-protein] reductase	99.35
KOG1200	256	consensus Mitochondrial/plastidial beta-ketoacyl-A	99.32
PRK08862	227	short chain dehydrogenase; Provisional	99.32
KOG1201	300	consensus Hydroxysteroid 17-beta dehydrogenase 11	99.31
PLN00015	308	protochlorophyllide reductase	99.3
COG3967	245	DltE Short-chain dehydrogenase involved in D-alani	99.29
PRK12428	241	3-alpha-hydroxysteroid dehydrogenase; Provisional	99.28
PF00106	167	adh_short: short chain dehydrogenase alcohol dehyd	99.24
KOG0725	270	consensus Reductases with broad range of substrate	99.22
KOG1209	289	consensus 1-Acyl dihydroxyacetone phosphate reduct	99.21
PRK06300	299	enoyl-(acyl carrier protein) reductase; Provisiona	99.2
PF13561	241	adh_short_C2: Enoyl-(Acyl carrier protein) reducta	99.19
KOG1208	314	consensus Dehydrogenases with different specificit	99.19
KOG1610	322	consensus Corticosteroid 11-beta-dehydrogenase and	99.17
COG1028	251	FabG Dehydrogenases with different specificities (	99.17
KOG1210	331	consensus Predicted 3-ketosphinganine reductase [S	99.13
PTZ00325	321	malate dehydrogenase; Provisional	99.1
PF08659	181	KR: KR domain; InterPro: IPR013968 This domain is	99.05
KOG4169	261	consensus 15-hydroxyprostaglandin dehydrogenase an	99.01
KOG1611	249	consensus Predicted short chain-type dehydrogenase	98.99
TIGR02813	2582	omega_3_PfaA polyketide-type polyunsaturated fatty	98.96
KOG1207	245	consensus Diacetyl reductase/L-xylulose reductase	98.94
cd01336	325	MDH_cytoplasmic_cytosolic Cytoplasmic and cytosoli	98.89
PLN00106	323	malate dehydrogenase	98.87
PRK06720	169	hypothetical protein; Provisional	98.86
PRK08309	177	short chain dehydrogenase; Provisional	98.83
KOG1014	312	consensus 17 beta-hydroxysteroid dehydrogenase typ	98.8
COG1748	389	LYS9 Saccharopine dehydrogenase and related protei	98.63
PRK05086	312	malate dehydrogenase; Provisional	98.62
PRK09620	229	hypothetical protein; Provisional	98.54
TIGR00715	256	precor6x_red precorrin-6x reductase. This enzyme w	98.54
PRK06732	229	phosphopantothenate--cysteine ligase; Validated	98.54
KOG1204	253	consensus Predicted dehydrogenase [Secondary metab	98.45
cd00704	323	MDH Malate dehydrogenase. Malate dehydrogenase (MD	98.44
cd01338	322	MDH_choloroplast_like Chloroplast-like malate dehy	98.41
PF00056	141	Ldh_1_N: lactate/malate dehydrogenase, NAD binding	98.33
KOG1199	260	consensus Short-chain alcohol dehydrogenase/3-hydr	98.31
TIGR01758	324	MDH_euk_cyt malate dehydrogenase, NAD-dependent. T	98.3
PRK14982	340	acyl-ACP reductase; Provisional	98.29
cd01078	194	NAD_bind_H4MPT_DH NADP binding domain of methylene	98.16
cd05294	309	LDH-like_MDH_nadp A lactate dehydrogenases-like st	98.16
PRK05579	399	bifunctional phosphopantothenoylcysteine decarboxy	98.1
KOG1478	341	consensus 3-keto sterol reductase [Lipid transport	98.1
PLN02968	381	Probable N-acetyl-gamma-glutamyl-phosphate reducta	98.09
PF03435	386	Saccharop_dh: Saccharopine dehydrogenase ; InterPr	98.04
cd01337	310	MDH_glyoxysomal_mitochondrial Glyoxysomal and mito	98.04
TIGR02114	227	coaB_strep phosphopantothenate--cysteine ligase, s	98.02
COG0623	259	FabI Enoyl-[acyl-carrier-protein]	98.02
PRK05671	336	aspartate-semialdehyde dehydrogenase; Reviewed	98.0
KOG2733	423	consensus Uncharacterized membrane protein [Functi	97.96
PF01488	135	Shikimate_DH: Shikimate / quinate 5-dehydrogenase;	97.92
PRK14874	334	aspartate-semialdehyde dehydrogenase; Provisional	97.92
COG3268	382	Uncharacterized conserved protein [Function unknow	97.92
PRK05442	326	malate dehydrogenase; Provisional	97.91
PF01113	124	DapB_N: Dihydrodipicolinate reductase, N-terminus;	97.86
TIGR01772	312	MDH_euk_gproteo malate dehydrogenase, NAD-dependen	97.85
TIGR01759	323	MalateDH-SF1 malate dehydrogenase. This model repr	97.85
PF01118	121	Semialdhyde_dh: Semialdehyde dehydrogenase, NAD bi	97.81
COG0569	225	TrkA K+ transport systems, NAD-binding component [	97.79
PRK00066	315	ldh L-lactate dehydrogenase; Reviewed	97.78
KOG1494	345	consensus NAD-dependent malate dehydrogenase [Ener	97.78
PRK00436	343	argC N-acetyl-gamma-glutamyl-phosphate reductase;	97.74
PRK13656	398	trans-2-enoyl-CoA reductase; Provisional	97.74
cd05291	306	HicDH_like L-2-hydroxyisocapronate dehydrogenases	97.69
PLN00112	444	malate dehydrogenase (NADP); Provisional	97.69
COG0039	313	Mdh Malate/lactate dehydrogenases [Energy producti	97.63
PRK06129	308	3-hydroxyacyl-CoA dehydrogenase; Validated	97.61
TIGR00521	390	coaBC_dfp phosphopantothenoylcysteine decarboxylas	97.59
PRK06223	307	malate dehydrogenase; Reviewed	97.57
TIGR01850	346	argC N-acetyl-gamma-glutamyl-phosphate reductase,	97.56
PTZ00117	319	malate dehydrogenase; Provisional	97.56
PRK08664	349	aspartate-semialdehyde dehydrogenase; Reviewed	97.54
cd05292	308	LDH_2 A subgroup of L-lactate dehydrogenases. L-la	97.53
PF08338	48	DUF1731: Domain of unknown function (DUF1731); Int	97.51
PRK00048	257	dihydrodipicolinate reductase; Provisional	97.5
PF10727	127	Rossmann-like: Rossmann-like domain; InterPro: IPR	97.48
cd00650	263	LDH_MDH_like NAD-dependent, lactate dehydrogenase-	97.48
PTZ00082	321	L-lactate dehydrogenase; Provisional	97.46
PF04127	185	DFP: DNA / pantothenate metabolism flavoprotein; I	97.46
cd05293	312	LDH_1 A subgroup of L-lactate dehydrogenases. L-la	97.46
COG2085	211	Predicted dinucleotide-binding enzymes [General fu	97.45
PRK12548	289	shikimate 5-dehydrogenase; Provisional	97.44
TIGR01757	387	Malate-DH_plant malate dehydrogenase, NADP-depende	97.4
PLN02383	344	aspartate semialdehyde dehydrogenase	97.38
PF03446	163	NAD_binding_2: NAD binding domain of 6-phosphogluc	97.37
PRK11064	415	wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Pro	97.37
PRK08655	437	prephenate dehydrogenase; Provisional	97.37
PRK08040	336	putative semialdehyde dehydrogenase; Provisional	97.35
TIGR01296	339	asd_B aspartate-semialdehyde dehydrogenase (peptid	97.35
TIGR01763	305	MalateDH_bact malate dehydrogenase, NAD-dependent.	97.34
PLN02819	1042	lysine-ketoglutarate reductase/saccharopine dehydr	97.33
PLN02602	350	lactate dehydrogenase	97.3
PF03721	185	UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogen	97.26
TIGR03026	411	NDP-sugDHase nucleotide sugar dehydrogenase. All o	97.24
PRK14106	450	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	97.23
COG1004	414	Ugd Predicted UDP-glucose 6-dehydrogenase [Cell en	97.22
cd05295	452	MDH_like Malate dehydrogenase-like. These MDH-like	97.21
COG0289	266	DapB Dihydrodipicolinate reductase [Amino acid tra	97.17
PRK07688	339	thiamine/molybdopterin biosynthesis ThiF/MoeB-like	97.15
TIGR02853	287	spore_dpaA dipicolinic acid synthetase, A subunit.	97.15
cd01065	155	NAD_bind_Shikimate_DH NAD(P) binding domain of Shi	97.15
PRK09496	453	trkA potassium transporter peripheral membrane com	97.13
cd01075	200	NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l	97.12
TIGR01915	219	npdG NADPH-dependent F420 reductase. This model re	97.11
PRK13940	414	glutamyl-tRNA reductase; Provisional	97.1
PRK00258	278	aroE shikimate 5-dehydrogenase; Reviewed	97.1
PRK08306	296	dipicolinate synthase subunit A; Reviewed	97.1
PRK07066	321	3-hydroxybutyryl-CoA dehydrogenase; Validated	97.09
cd05290	307	LDH_3 A subgroup of L-lactate dehydrogenases. L-la	97.07
KOG1198	347	consensus Zinc-binding oxidoreductase [Energy prod	97.07
PRK11199	374	tyrA bifunctional chorismate mutase/prephenate deh	97.07
PF00899	135	ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a	97.02
PRK11559	296	garR tartronate semialdehyde reductase; Provisiona	97.01
PLN02712	667	arogenate dehydrogenase	96.99
PF02826	178	2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy	96.98
PF03807	96	F420_oxidored: NADP oxidoreductase coenzyme F420-d	96.97
PRK15057	388	UDP-glucose 6-dehydrogenase; Provisional	96.95
smart00859	122	Semialdhyde_dh Semialdehyde dehydrogenase, NAD bin	96.92
PRK12475	338	thiamine/molybdopterin biosynthesis MoeB-like prot	96.92
COG0136	334	Asd Aspartate-semialdehyde dehydrogenase [Amino ac	96.91
PRK14618	328	NAD(P)H-dependent glycerol-3-phosphate dehydrogena	96.9
cd01080	168	NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of	96.9
PRK00094	325	gpsA NAD(P)H-dependent glycerol-3-phosphate dehydr	96.9
PRK11863	313	N-acetyl-gamma-glutamyl-phosphate reductase; Provi	96.88
PRK07417	279	arogenate dehydrogenase; Reviewed	96.88
COG0002	349	ArgC Acetylglutamate semialdehyde dehydrogenase [A	96.86
cd05213	311	NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain	96.86
COG2130	340	Putative NADP-dependent oxidoreductases [General f	96.86
PRK07531	495	bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioe	96.85
TIGR02356	202	adenyl_thiF thiazole biosynthesis adenylyltransfer	96.85
TIGR00872	298	gnd_rel 6-phosphogluconate dehydrogenase (decarbox	96.84
PRK14619	308	NAD(P)H-dependent glycerol-3-phosphate dehydrogena	96.84
COG0240	329	GpsA Glycerol-3-phosphate dehydrogenase [Energy pr	96.84
cd00300	300	LDH_like L-lactate dehydrogenase-like enzymes. Mem	96.84
PRK08293	287	3-hydroxybutyryl-CoA dehydrogenase; Validated	96.82
PRK08057	248	cobalt-precorrin-6x reductase; Reviewed	96.82
PLN02353	473	probable UDP-glucose 6-dehydrogenase	96.8
COG0604	326	Qor NADPH:quinone reductase and related Zn-depende	96.8
PF01210	157	NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate	96.79
TIGR01035	417	hemA glutamyl-tRNA reductase. This enzyme, togethe	96.79
PRK11880	267	pyrroline-5-carboxylate reductase; Reviewed	96.78
TIGR01745	366	asd_gamma aspartate-semialdehyde dehydrogenase, ga	96.78
TIGR00978	341	asd_EA aspartate-semialdehyde dehydrogenase (non-p	96.77
PF13950	62	Epimerase_Csub: UDP-glucose 4-epimerase C-term sub	96.77
PRK07502	307	cyclohexadienyl dehydrogenase; Validated	96.74
cd01339	300	LDH-like_MDH L-lactate dehydrogenase-like malate d	96.74
KOG1496	332	consensus Malate dehydrogenase [Energy production	96.73
PRK06598	369	aspartate-semialdehyde dehydrogenase; Reviewed	96.73
PRK12549	284	shikimate 5-dehydrogenase; Reviewed	96.72
PRK04148	134	hypothetical protein; Provisional	96.7
PRK09496	453	trkA potassium transporter peripheral membrane com	96.69
PLN00203	519	glutamyl-tRNA reductase	96.68
PRK06728	347	aspartate-semialdehyde dehydrogenase; Provisional	96.68
PRK00045	423	hemA glutamyl-tRNA reductase; Reviewed	96.68
COG1179	263	Dinucleotide-utilizing enzymes involved in molybdo	96.67
PRK09288	395	purT phosphoribosylglycinamide formyltransferase 2	96.64
PRK15461	296	NADH-dependent gamma-hydroxybutyrate dehydrogenase	96.63
PRK02472	447	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	96.62
TIGR02355	240	moeB molybdopterin synthase sulfurylase MoeB. This	96.61
PRK06019	372	phosphoribosylaminoimidazole carboxylase ATPase su	96.61
TIGR02354	200	thiF_fam2 thiamine biosynthesis protein ThiF, fami	96.61
PRK07679	279	pyrroline-5-carboxylate reductase; Reviewed	96.59
PRK06130	311	3-hydroxybutyryl-CoA dehydrogenase; Validated	96.58
cd00757	228	ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1	96.57
TIGR00507	270	aroE shikimate 5-dehydrogenase. This model finds p	96.55
PRK08229	341	2-dehydropantoate 2-reductase; Provisional	96.53
TIGR01505	291	tartro_sem_red 2-hydroxy-3-oxopropionate reductase	96.51
PRK12490	299	6-phosphogluconate dehydrogenase-like protein; Rev	96.5
PRK09260	288	3-hydroxybutyryl-CoA dehydrogenase; Validated	96.49
PRK07530	292	3-hydroxybutyryl-CoA dehydrogenase; Validated	96.48
PRK05600	370	thiamine biosynthesis protein ThiF; Validated	96.47
TIGR00518	370	alaDH alanine dehydrogenase. The family of known L	96.46
cd01485	198	E1-1_like Ubiquitin activating enzyme (E1), repeat	96.45
PRK06718	202	precorrin-2 dehydrogenase; Reviewed	96.45
PRK07634	245	pyrroline-5-carboxylate reductase; Reviewed	96.44
PRK06444	197	prephenate dehydrogenase; Provisional	96.42
PRK07819	286	3-hydroxybutyryl-CoA dehydrogenase; Validated	96.42
PRK14192	283	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.42
cd08295	338	double_bond_reductase_like Arabidopsis alkenal dou	96.41
PRK12491	272	pyrroline-5-carboxylate reductase; Reviewed	96.4
PF02571	249	CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro:	96.4
PLN02256	304	arogenate dehydrogenase	96.37
cd01483	143	E1_enzyme_family Superfamily of activating enzymes	96.36
PRK15469	312	ghrA bifunctional glyoxylate/hydroxypyruvate reduc	96.36
TIGR02825	325	B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15	96.35
PRK13302	271	putative L-aspartate dehydrogenase; Provisional	96.35
PRK07574	385	formate dehydrogenase; Provisional	96.35
PRK05597	355	molybdopterin biosynthesis protein MoeB; Validated	96.35
PLN02688	266	pyrroline-5-carboxylate reductase	96.33
PRK08328	231	hypothetical protein; Provisional	96.32
PRK05690	245	molybdopterin biosynthesis protein MoeB; Provision	96.32
PRK12480	330	D-lactate dehydrogenase; Provisional	96.31
TIGR01851	310	argC_other N-acetyl-gamma-glutamyl-phosphate reduc	96.31
PRK09599	301	6-phosphogluconate dehydrogenase-like protein; Rev	96.31
PRK08818	370	prephenate dehydrogenase; Provisional	96.31
PRK06522	304	2-dehydropantoate 2-reductase; Reviewed	96.29
COG2099	257	CobK Precorrin-6x reductase [Coenzyme metabolism]	96.29
TIGR01809	282	Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO	96.26
cd08259	332	Zn_ADH5 Alcohol dehydrogenases of the MDR family.	96.25
PRK13304	265	L-aspartate dehydrogenase; Reviewed	96.24
PRK14175	286	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.22
TIGR00036	266	dapB dihydrodipicolinate reductase.	96.22
PF13380	116	CoA_binding_2: CoA binding domain; PDB: 3FF4_A 2D5	96.22
PRK14194	301	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.2
COG2084	286	MmsB 3-hydroxyisobutyrate dehydrogenase and relate	96.2
PLN02775	286	Probable dihydrodipicolinate reductase	96.2
COG0287	279	TyrA Prephenate dehydrogenase [Amino acid transpor	96.19
PRK15116	268	sulfur acceptor protein CsdL; Provisional	96.17
PRK13982	475	bifunctional SbtC-like/phosphopantothenoylcysteine	96.16
COG0373	414	HemA Glutamyl-tRNA reductase [Coenzyme metabolism]	96.14
PRK13243	333	glyoxylate reductase; Reviewed	96.12
KOG1196	343	consensus Predicted NAD-dependent oxidoreductase [	96.12
PRK06035	291	3-hydroxyacyl-CoA dehydrogenase; Validated	96.1
TIGR01771	299	L-LDH-NAD L-lactate dehydrogenase. This model repr	96.09
PRK06719	157	precorrin-2 dehydrogenase; Validated	96.06
PRK06249	313	2-dehydropantoate 2-reductase; Provisional	96.05
PRK08223	287	hypothetical protein; Validated	96.04
PRK06545	359	prephenate dehydrogenase; Validated	96.04
COG1064	339	AdhP Zn-dependent alcohol dehydrogenases [General	96.03
PRK08644	212	thiamine biosynthesis protein ThiF; Provisional	96.01
COG0026	375	PurK Phosphoribosylaminoimidazole carboxylase (NCA	96.0
PLN03139	386	formate dehydrogenase; Provisional	96.0
cd08294	329	leukotriene_B4_DH_like 13-PGR is a bifunctional en	95.99
PRK05476	425	S-adenosyl-L-homocysteine hydrolase; Provisional	95.99
COG1712	255	Predicted dinucleotide-utilizing enzyme [General f	95.95
cd00755	231	YgdL_like Family of activating enzymes (E1) of ubi	95.95
cd05211	217	NAD_bind_Glu_Leu_Phe_Val NAD(P) binding domain of	95.95
PRK07878	392	molybdopterin biosynthesis-like protein MoeZ; Vali	95.94
PRK09310	477	aroDE bifunctional 3-dehydroquinate dehydratase/sh	95.94

>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]

Probab=100.00  E-value=3.2e-45  Score=300.09  Aligned_cols=292  Identities=48%  Similarity=0.829  Sum_probs=265.6

Q ss_pred             EEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcC-CCcEEEECCCCCCCCC
Q 018503           53 VSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ-GSTAVVNLAGTPIGTR  131 (355)
Q Consensus        53 IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-~~d~vi~~a~~~~~~~  131 (355)
                      |+|||||||||++|+..|.+.||+|++++|++.+.......       .+.  .-+.+.+... ++|+|||+||.+....
T Consensus         1 IliTGgTGlIG~~L~~~L~~~gh~v~iltR~~~~~~~~~~~-------~v~--~~~~~~~~~~~~~DavINLAG~~I~~r   71 (297)
T COG1090           1 ILITGGTGLIGRALTARLRKGGHQVTILTRRPPKASQNLHP-------NVT--LWEGLADALTLGIDAVINLAGEPIAER   71 (297)
T ss_pred             CeEeccccchhHHHHHHHHhCCCeEEEEEcCCcchhhhcCc-------ccc--ccchhhhcccCCCCEEEECCCCccccc
Confidence            68999999999999999999999999999999876654432       111  3445555555 7999999999976655


Q ss_pred             -CChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCChhHHHHHHHHHHHHhccC
Q 018503          132 -WSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDYLAEVCREWEGTALKVN  210 (355)
Q Consensus       132 -~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~~y~~k~~~~~~~~~~~~~  210 (355)
                       |..+.++.+.+.-+..|..|.+++.+  ...+.-+++|.+++++||...+..++|++++...|.++.+.++|.+....+
T Consensus        72 rWt~~~K~~i~~SRi~~T~~L~e~I~~--~~~~P~~~isaSAvGyYG~~~~~~~tE~~~~g~~Fla~lc~~WE~~a~~a~  149 (297)
T COG1090          72 RWTEKQKEEIRQSRINTTEKLVELIAA--SETKPKVLISASAVGYYGHSGDRVVTEESPPGDDFLAQLCQDWEEEALQAQ  149 (297)
T ss_pred             cCCHHHHHHHHHHHhHHHHHHHHHHHh--ccCCCcEEEecceEEEecCCCceeeecCCCCCCChHHHHHHHHHHHHhhhh
Confidence             99999999999999999999999997  455666799999999999999999999999999999999999999888776


Q ss_pred             C-CCeEEEEEecEEEeCCCCcccchHHHHHHHhCCCCCCCCcceecccHHHHHHHHHHHHhCCCCCCceEecCCCccCHH
Q 018503          211 K-DVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRGVINGTAPNPVRLA  289 (355)
Q Consensus       211 ~-~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~~~~~~i~~~~~~s~~  289 (355)
                      . |.+++++|.|.|.++..+.+.++.+.++...|.++|+|.++++|||++|+++++..++++....|.||++++.|++..
T Consensus       150 ~~gtRvvllRtGvVLs~~GGaL~~m~~~fk~glGG~~GsGrQ~~SWIhieD~v~~I~fll~~~~lsGp~N~taP~PV~~~  229 (297)
T COG1090         150 QLGTRVVLLRTGVVLSPDGGALGKMLPLFKLGLGGKLGSGRQWFSWIHIEDLVNAILFLLENEQLSGPFNLTAPNPVRNK  229 (297)
T ss_pred             hcCceEEEEEEEEEecCCCcchhhhcchhhhccCCccCCCCceeeeeeHHHHHHHHHHHHhCcCCCCcccccCCCcCcHH
Confidence            6 999999999999999999999999999999999999999999999999999999999999989999999999999999


Q ss_pred             HHHHHHHHHhCCCCCCCCcHHHHHHHhcccceeeecCccccchhHHhCCCCCCccCHHHHHHHHhC
Q 018503          290 EMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPFKYRYVKDALKAIMS  355 (355)
Q Consensus       290 el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~lG~~p~~~~~~~~l~~~~~  355 (355)
                      |+.+.++++++++..+++|.+..+..+|+....+...+++-+.|+.+.||+++|++++++|++++.
T Consensus       230 ~F~~al~r~l~RP~~~~vP~~~~rl~LGe~a~~lL~gQrvlP~kl~~aGF~F~y~dl~~AL~~il~  295 (297)
T COG1090         230 EFAHALGRALHRPAILPVPSFALRLLLGEMADLLLGGQRVLPKKLEAAGFQFQYPDLEEALADILK  295 (297)
T ss_pred             HHHHHHHHHhCCCccccCcHHHHHHHhhhhHHHHhccchhhHHHHHHCCCeeecCCHHHHHHHHHh
Confidence            999999999999988999999999999999888999999999999999999999999999998863

>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]

Probab=100.00  E-value=5.1e-44  Score=296.38  Aligned_cols=290  Identities=21%  Similarity=0.263  Sum_probs=236.1

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcC--CCcEEEECCCCCC
Q 018503           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ--GSTAVVNLAGTPI  128 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--~~d~vi~~a~~~~  128 (355)
                      |+||||||+||||+|.+.+|++.||+|+++++-............ ..+...|+.|.+.+.+.++  ++|+|||+||.. 
T Consensus         1 ~~iLVtGGAGYIGSHtv~~Ll~~G~~vvV~DNL~~g~~~~v~~~~-~~f~~gDi~D~~~L~~vf~~~~idaViHFAa~~-   78 (329)
T COG1087           1 MKVLVTGGAGYIGSHTVRQLLKTGHEVVVLDNLSNGHKIALLKLQ-FKFYEGDLLDRALLTAVFEENKIDAVVHFAASI-   78 (329)
T ss_pred             CeEEEecCcchhHHHHHHHHHHCCCeEEEEecCCCCCHHHhhhcc-CceEEeccccHHHHHHHHHhcCCCEEEECcccc-
Confidence            689999999999999999999999999999997655443322210 1266789999999999996  799999999975 


Q ss_pred             CCCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCCCCccccCCCC--CCChh-HHHHHHHHHHH
Q 018503          129 GTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSP--SGNDY-LAEVCREWEGT  205 (355)
Q Consensus       129 ~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~--~~~~y-~~k~~~~~~~~  205 (355)
                      ...-+...|..+++.|+.+|.+|++++++  .++++|||-||.++  ||.+...|++|+.+  |.++| .+|+..|.+..
T Consensus        79 ~VgESv~~Pl~Yy~NNv~gTl~Ll~am~~--~gv~~~vFSStAav--YG~p~~~PI~E~~~~~p~NPYG~sKlm~E~iL~  154 (329)
T COG1087          79 SVGESVQNPLKYYDNNVVGTLNLIEAMLQ--TGVKKFIFSSTAAV--YGEPTTSPISETSPLAPINPYGRSKLMSEEILR  154 (329)
T ss_pred             ccchhhhCHHHHHhhchHhHHHHHHHHHH--hCCCEEEEecchhh--cCCCCCcccCCCCCCCCCCcchhHHHHHHHHHH
Confidence            33446778889999999999999999999  89999999999999  99999999999987  45688 99999999999


Q ss_pred             HhccCCCCeEEEEEecEEEeCCC--------CcccchHHHH-HHHhCCC-----------CCCCCcceecccHHHHHHHH
Q 018503          206 ALKVNKDVRLALIRIGIVLGKDG--------GALAKMIPLF-MMFAGGP-----------LGSGQQWFSWIHLDDIVNLI  265 (355)
Q Consensus       206 ~~~~~~~~~~~i~Rp~~i~G~~~--------~~~~~~~~~~-~~~~~~~-----------~~~~~~~~~~i~v~Dva~~~  265 (355)
                      .+...++++++++|.+++.|...        .....++|.. +...|+.           ..+|...||+|||.|+|++.
T Consensus       155 d~~~a~~~~~v~LRYFN~aGA~~~G~iGe~~~~~thLip~~~q~A~G~r~~l~ifG~DY~T~DGT~iRDYIHV~DLA~aH  234 (329)
T COG1087         155 DAAKANPFKVVILRYFNVAGACPDGTLGQRYPGATLLIPVAAEAALGKRDKLFIFGDDYDTKDGTCIRDYIHVDDLADAH  234 (329)
T ss_pred             HHHHhCCCcEEEEEecccccCCCCCccCCCCCCcchHHHHHHHHHhcCCceeEEeCCCCCCCCCCeeeeeeehhHHHHHH
Confidence            98888899999999999998542        2335677766 3333332           15778899999999999999


Q ss_pred             HHHHhCCC---CCCceEecCCCccCHHHHHHHHHHHhCCCCCCCCcHHHHHHHhcccceeeecCccccchhHHhCCCCCC
Q 018503          266 YEALSNPS---YRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPFK  342 (355)
Q Consensus       266 ~~~~~~~~---~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~lG~~p~  342 (355)
                      +.+++.-.   ...+||+++|+-.|+.|+++.++++.|++    +|........|++..++.+..+.    .++|||+|+
T Consensus       235 ~~Al~~L~~~g~~~~~NLG~G~G~SV~evi~a~~~vtg~~----ip~~~~~RR~GDpa~l~Ad~~kA----~~~Lgw~p~  306 (329)
T COG1087         235 VLALKYLKEGGSNNIFNLGSGNGFSVLEVIEAAKKVTGRD----IPVEIAPRRAGDPAILVADSSKA----RQILGWQPT  306 (329)
T ss_pred             HHHHHHHHhCCceeEEEccCCCceeHHHHHHHHHHHhCCc----CceeeCCCCCCCCceeEeCHHHH----HHHhCCCcc
Confidence            99987422   23499999999999999999999999966    34344445577877777665553    356999999


Q ss_pred             ccCHHHHHHHHh
Q 018503          343 YRYVKDALKAIM  354 (355)
Q Consensus       343 ~~~~~~~l~~~~  354 (355)
                      ++++++.+++.+
T Consensus       307 ~~~L~~ii~~aw  318 (329)
T COG1087         307 YDDLEDIIKDAW  318 (329)
T ss_pred             cCCHHHHHHHHH
Confidence            988999998865

>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional

Probab=100.00  E-value=2.6e-41  Score=305.05  Aligned_cols=298  Identities=14%  Similarity=0.107  Sum_probs=218.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccC----CC-----CCCccCCCeeecCCcchhhhcCCCcE
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIF----PG-----KKTRFFPGVMIAEEPQWRDCIQGSTA  119 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~~-----~~~~~~~~~d~~~~~~~~~~~~~~d~  119 (355)
                      .+|+|||||||||||++|+++|+++|++|++++|.........    ..     .....+...|+.|.+.+.++++++|+
T Consensus        14 ~~~~vlVtGatGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~~~~~~d~   93 (348)
T PRK15181         14 APKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIRKFTDCQKACKNVDY   93 (348)
T ss_pred             cCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCcchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhhCCCE
Confidence            3479999999999999999999999999999998654321110    00     00001334688888889999999999


Q ss_pred             EEECCCCCCCCCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCCCCccccCCCC--CCChh-HH
Q 018503          120 VVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSP--SGNDY-LA  196 (355)
Q Consensus       120 vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~--~~~~y-~~  196 (355)
                      |||+|+.... .....++...+++|+.++.+++++|++  .++++|||+||.++  ||...+.+..|+.+  +...| .+
T Consensus        94 ViHlAa~~~~-~~~~~~~~~~~~~Nv~gt~nll~~~~~--~~~~~~v~~SS~~v--yg~~~~~~~~e~~~~~p~~~Y~~s  168 (348)
T PRK15181         94 VLHQAALGSV-PRSLKDPIATNSANIDGFLNMLTAARD--AHVSSFTYAASSST--YGDHPDLPKIEERIGRPLSPYAVT  168 (348)
T ss_pred             EEECccccCc-hhhhhCHHHHHHHHHHHHHHHHHHHHH--cCCCeEEEeechHh--hCCCCCCCCCCCCCCCCCChhhHH
Confidence            9999997432 223345667899999999999999999  78999999999998  98655556666554  34568 88


Q ss_pred             HHHHHHHHHHhccCCCCeEEEEEecEEEeCCCCcc---cchHHHH--HHHhCCCC---CCCCcceecccHHHHHHHHHHH
Q 018503          197 EVCREWEGTALKVNKDVRLALIRIGIVLGKDGGAL---AKMIPLF--MMFAGGPL---GSGQQWFSWIHLDDIVNLIYEA  268 (355)
Q Consensus       197 k~~~~~~~~~~~~~~~~~~~i~Rp~~i~G~~~~~~---~~~~~~~--~~~~~~~~---~~~~~~~~~i~v~Dva~~~~~~  268 (355)
                      |...|.....+....+++++++||+++|||+.+..   ..+++.+  +...++++   +++++.++|+|++|+|++++.+
T Consensus       169 K~~~e~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~~~~~i~~~~~~~~~~~~i~~~g~g~~~rd~i~v~D~a~a~~~~  248 (348)
T PRK15181        169 KYVNELYADVFARSYEFNAIGLRYFNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIENVIQANLLS  248 (348)
T ss_pred             HHHHHHHHHHHHHHhCCCEEEEEecceeCcCCCCCCccccCHHHHHHHHHcCCCcEEeCCCCceEeeEEHHHHHHHHHHH
Confidence            88888877777767799999999999999975322   2344433  44555554   7789999999999999999987


Q ss_pred             HhCCC---CCCceEecCCCccCHHHHHHHHHHHhCCCCCCCCcHHHHHHHhcccceeeecCccccchhHHh-CCCCCCcc
Q 018503          269 LSNPS---YRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKE-LGFPFKYR  344 (355)
Q Consensus       269 ~~~~~---~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~-lG~~p~~~  344 (355)
                      +....   .+++||+++++++|+.|+++.+.+.++........ ....  .............++.+|+++ +||.|+++
T Consensus       249 ~~~~~~~~~~~~yni~~g~~~s~~e~~~~i~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~d~~k~~~~lGw~P~~s  325 (348)
T PRK15181        249 ATTNDLASKNKVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSR-AEPI--YKDFRDGDVKHSQADITKIKTFLSYEPEFD  325 (348)
T ss_pred             HhcccccCCCCEEEecCCCcEeHHHHHHHHHHHhCcccccccC-CCcc--cCCCCCCcccccccCHHHHHHHhCCCCCCC
Confidence            76432   45799999999999999999999999743110000 0000  000000011234567788865 99999996


Q ss_pred             CHHHHHHHHhC
Q 018503          345 YVKDALKAIMS  355 (355)
Q Consensus       345 ~~~~~l~~~~~  355 (355)
                       ++|+|+++++
T Consensus       326 -l~egl~~~~~  335 (348)
T PRK15181        326 -IKEGLKQTLK  335 (348)
T ss_pred             -HHHHHHHHHH
Confidence             9999999863

>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]

Probab=100.00  E-value=1.8e-41  Score=279.70  Aligned_cols=290  Identities=18%  Similarity=0.204  Sum_probs=231.1

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhCC--CeEEEEecCCc-----hhhccCCCCCCccCCCeeecCCcchhhhcC--CCcEEE
Q 018503           51 MTVSVTGATGFIGRRLVQRLQADN--HQVRVLTRSRS-----KAELIFPGKKTRFFPGVMIAEEPQWRDCIQ--GSTAVV  121 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~-----~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--~~d~vi  121 (355)
                      |++|||||+||||+++++.++++.  .+|++++.-.-     ....+... ..-.+.+.|+.|.+.+.++++  ++|+|+
T Consensus         1 ~~iLVTGGaGFIGsnfvr~~~~~~~d~~v~~~DkLTYAgn~~~l~~~~~~-~~~~fv~~DI~D~~~v~~~~~~~~~D~Vv   79 (340)
T COG1088           1 MKILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLTYAGNLENLADVEDS-PRYRFVQGDICDRELVDRLFKEYQPDAVV   79 (340)
T ss_pred             CcEEEecCcchHHHHHHHHHHhcCCCceEEEEecccccCCHHHHHhhhcC-CCceEEeccccCHHHHHHHHHhcCCCeEE
Confidence            689999999999999999999974  56788876332     11111111 111266789999999999997  689999


Q ss_pred             ECCCCCCCCCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCC-CcEEEEeeeeeeeeCCCCCc--cccCCCC--CCChh-H
Q 018503          122 NLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGV-RPSVLVSATALGYYGTSETE--VFDESSP--SGNDY-L  195 (355)
Q Consensus       122 ~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~-~~~v~~Ss~~~~~yg~~~~~--~~~e~~~--~~~~y-~  195 (355)
                      |+|+.++ .+-+-..+..+.++|+.||.+|++++++  ... .||+++||..|  ||+....  .++|.+|  |.++| .
T Consensus        80 hfAAESH-VDRSI~~P~~Fi~TNv~GT~~LLEaar~--~~~~frf~HISTDEV--YG~l~~~~~~FtE~tp~~PsSPYSA  154 (340)
T COG1088          80 HFAAESH-VDRSIDGPAPFIQTNVVGTYTLLEAARK--YWGKFRFHHISTDEV--YGDLGLDDDAFTETTPYNPSSPYSA  154 (340)
T ss_pred             Eechhcc-ccccccChhhhhhcchHHHHHHHHHHHH--hcccceEEEeccccc--cccccCCCCCcccCCCCCCCCCcch
Confidence            9999875 4556778899999999999999999999  444 48999999999  9976554  6889887  45688 9


Q ss_pred             HHHHHHHHHHHhccCCCCeEEEEEecEEEeCCCCcccchHHHH--HHHhCCCC---CCCCcceecccHHHHHHHHHHHHh
Q 018503          196 AEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLF--MMFAGGPL---GSGQQWFSWIHLDDIVNLIYEALS  270 (355)
Q Consensus       196 ~k~~~~~~~~~~~~~~~~~~~i~Rp~~i~G~~~~~~~~~~~~~--~~~~~~~~---~~~~~~~~~i~v~Dva~~~~~~~~  270 (355)
                      +|.....+...+...+|++++|.|+++-|||..- ..+++|..  ....|.++   |+|.+.|||+||+|-|+++..++.
T Consensus       155 SKAasD~lVray~~TYglp~~ItrcSNNYGPyqf-pEKlIP~~I~nal~g~~lpvYGdG~~iRDWl~VeDh~~ai~~Vl~  233 (340)
T COG1088         155 SKAASDLLVRAYVRTYGLPATITRCSNNYGPYQF-PEKLIPLMIINALLGKPLPVYGDGLQIRDWLYVEDHCRAIDLVLT  233 (340)
T ss_pred             hhhhHHHHHHHHHHHcCCceEEecCCCCcCCCcC-chhhhHHHHHHHHcCCCCceecCCcceeeeEEeHhHHHHHHHHHh
Confidence            9999999999999999999999999999999743 34677765  66777775   899999999999999999999999


Q ss_pred             CCCCCCceEecCCCccCHHHHHHHHHHHhCCCCCCCCcHHHHH---HHhcccceeeecCccccchhH-HhCCCCCCccCH
Q 018503          271 NPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALK---AVLGEGAFVVLEGQRVVPARA-KELGFPFKYRYV  346 (355)
Q Consensus       271 ~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~k~-~~lG~~p~~~~~  346 (355)
                      +...+++|||+++...+-.|+++.|++.+|+...-  -...+.   ..+|-..     ...++.+|+ ++|||.|+++ |
T Consensus       234 kg~~GE~YNIgg~~E~~Nlevv~~i~~~l~~~~~~--~~~li~~V~DRpGHD~-----RYaid~~Ki~~eLgW~P~~~-f  305 (340)
T COG1088         234 KGKIGETYNIGGGNERTNLEVVKTICELLGKDKPD--YRDLITFVEDRPGHDR-----RYAIDASKIKRELGWRPQET-F  305 (340)
T ss_pred             cCcCCceEEeCCCccchHHHHHHHHHHHhCccccc--hhhheEeccCCCCCcc-----ceeechHHHhhhcCCCcCCC-H
Confidence            99888899999999999999999999999987321  000111   1122222     223455665 7899999986 9


Q ss_pred             HHHHHHHhC
Q 018503          347 KDALKAIMS  355 (355)
Q Consensus       347 ~~~l~~~~~  355 (355)
                      ++||++|++
T Consensus       306 e~GlrkTv~  314 (340)
T COG1088         306 ETGLRKTVD  314 (340)
T ss_pred             HHHHHHHHH
Confidence            999999974

>TIGR01777 yfcH conserved hypothetical protein TIGR01777

Probab=100.00  E-value=4.8e-39  Score=284.30  Aligned_cols=289  Identities=49%  Similarity=0.838  Sum_probs=217.4

Q ss_pred             EEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcCCCcEEEECCCCCCC-CC
Q 018503           53 VSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTPIG-TR  131 (355)
Q Consensus        53 IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~~~~-~~  131 (355)
                      |||||||||||+++++.|++.|++|++++|++.........       .++..+...+.+.+.++|+|||+|+.... .+
T Consensus         1 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~D~Vvh~a~~~~~~~~   73 (292)
T TIGR01777         1 ILITGGTGFIGRALTQRLTKDGHEVTILTRSPPAGANTKWE-------GYKPWAPLAESEALEGADAVINLAGEPIADKR   73 (292)
T ss_pred             CEEEcccchhhHHHHHHHHHcCCEEEEEeCCCCCCCcccce-------eeecccccchhhhcCCCCEEEECCCCCccccc
Confidence            68999999999999999999999999999988764332211       11111224555677899999999997532 34


Q ss_pred             CChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCCCCccccCCCCC-CChhHHHHHHHHHHHHh-cc
Q 018503          132 WSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPS-GNDYLAEVCREWEGTAL-KV  209 (355)
Q Consensus       132 ~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~-~~~y~~k~~~~~~~~~~-~~  209 (355)
                      +....+..+++.|+.++.++++++++  .++++.++++++++..||...+.+++|+.++ ...|+.+...+.+.... ..
T Consensus        74 ~~~~~~~~~~~~n~~~~~~l~~a~~~--~~~~~~~~i~~S~~~~yg~~~~~~~~E~~~~~~~~~~~~~~~~~e~~~~~~~  151 (292)
T TIGR01777        74 WTEERKQEIRDSRIDTTRALVEAIAA--AEQKPKVFISASAVGYYGTSEDRVFTEEDSPAGDDFLAELCRDWEEAAQAAE  151 (292)
T ss_pred             CCHHHHHHHHhcccHHHHHHHHHHHh--cCCCceEEEEeeeEEEeCCCCCCCcCcccCCCCCChHHHHHHHHHHHhhhch
Confidence            55566778889999999999999999  6665444444444333987666778888743 33344554444433322 23


Q ss_pred             CCCCeEEEEEecEEEeCCCCcccchHHHHHHHhCCCCCCCCcceecccHHHHHHHHHHHHhCCCCCCceEecCCCccCHH
Q 018503          210 NKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRGVINGTAPNPVRLA  289 (355)
Q Consensus       210 ~~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~~~~~~i~~~~~~s~~  289 (355)
                      +.+++++++||+.+||+..+....+...+....+..++.++..++++|++|+|+++..+++++...++||+++++++|+.
T Consensus       152 ~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~i~v~Dva~~i~~~l~~~~~~g~~~~~~~~~~s~~  231 (292)
T TIGR01777       152 DLGTRVVLLRTGIVLGPKGGALAKMLPPFRLGLGGPLGSGRQWFSWIHIEDLVQLILFALENASISGPVNATAPEPVRNK  231 (292)
T ss_pred             hcCCceEEEeeeeEECCCcchhHHHHHHHhcCcccccCCCCcccccEeHHHHHHHHHHHhcCcccCCceEecCCCccCHH
Confidence            35899999999999999754333333333333344567788999999999999999999988666789999999999999


Q ss_pred             HHHHHHHHHhCCCCCCCCcHHHHHHHhcccceeeecCccccchhHHhCCCCCCccCHHHHH
Q 018503          290 EMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPFKYRYVKDAL  350 (355)
Q Consensus       290 el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~lG~~p~~~~~~~~l  350 (355)
                      |+++.+++.+|++..+++|.+.....+++.......+.+.+++|++++||+|+|++++|+|
T Consensus       232 di~~~i~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~  292 (292)
T TIGR01777       232 EFAKALARALHRPAFFPVPAFVLRALLGEMADLLLKGQRVLPEKLLEAGFQFQYPDLDEAL  292 (292)
T ss_pred             HHHHHHHHHhCCCCcCcCCHHHHHHHhchhhHHHhCCcccccHHHHhcCCeeeCcChhhcC
Confidence            9999999999988777899988877666655556678889999999999999998899874

This model represents a clade of proteins of unknown function including the E. coli yfcH protein.

>PLN02166 dTDP-glucose 4,6-dehydratase

Probab=100.00  E-value=5.5e-39  Score=295.17  Aligned_cols=286  Identities=16%  Similarity=0.205  Sum_probs=213.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhc-cCCCCCCccCCCeeecCCcchhhhcCCCcEEEECCCCC
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAEL-IFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTP  127 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~~  127 (355)
                      ..|||||||||||||++|+++|+++|++|++++|....... ......   ...+++.+.|.++..+.++|+|||+|+..
T Consensus       119 ~~mkILVTGatGFIGs~Lv~~Ll~~G~~V~~ldr~~~~~~~~~~~~~~---~~~~~~~~~Di~~~~~~~~D~ViHlAa~~  195 (436)
T PLN02166        119 KRLRIVVTGGAGFVGSHLVDKLIGRGDEVIVIDNFFTGRKENLVHLFG---NPRFELIRHDVVEPILLEVDQIYHLACPA  195 (436)
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCccHhHhhhhcc---CCceEEEECccccccccCCCEEEECceec
Confidence            45899999999999999999999999999999986432111 111000   12456666666666678899999999864


Q ss_pred             CCCCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCCCCccccCCC-----CC--CChh-HHHHH
Q 018503          128 IGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESS-----PS--GNDY-LAEVC  199 (355)
Q Consensus       128 ~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~-----~~--~~~y-~~k~~  199 (355)
                      ... ....++...+++|+.++.+|+++|++  .+. ++||+||.++  ||+..+.+.+|+.     +.  .+.| .+|..
T Consensus       196 ~~~-~~~~~p~~~~~~Nv~gT~nLleaa~~--~g~-r~V~~SS~~V--Yg~~~~~p~~E~~~~~~~p~~p~s~Yg~SK~~  269 (436)
T PLN02166        196 SPV-HYKYNPVKTIKTNVMGTLNMLGLAKR--VGA-RFLLTSTSEV--YGDPLEHPQKETYWGNVNPIGERSCYDEGKRT  269 (436)
T ss_pred             cch-hhccCHHHHHHHHHHHHHHHHHHHHH--hCC-EEEEECcHHH--hCCCCCCCCCccccccCCCCCCCCchHHHHHH
Confidence            322 22335678899999999999999998  564 8999999999  9976666666653     32  3458 88888


Q ss_pred             HHHHHHHhccCCCCeEEEEEecEEEeCCCCc-ccchHHHH--HHHhCCCC---CCCCcceecccHHHHHHHHHHHHhCCC
Q 018503          200 REWEGTALKVNKDVRLALIRIGIVLGKDGGA-LAKMIPLF--MMFAGGPL---GSGQQWFSWIHLDDIVNLIYEALSNPS  273 (355)
Q Consensus       200 ~~~~~~~~~~~~~~~~~i~Rp~~i~G~~~~~-~~~~~~~~--~~~~~~~~---~~~~~~~~~i~v~Dva~~~~~~~~~~~  273 (355)
                      .|.....+....+++++++||+++||++... ...++..+  +...++++   +++++.++|+|++|+|++++.+++.+ 
T Consensus       270 aE~~~~~y~~~~~l~~~ilR~~~vYGp~~~~~~~~~i~~~i~~~l~~~~i~v~g~g~~~rdfi~V~Dva~ai~~~~~~~-  348 (436)
T PLN02166        270 AETLAMDYHRGAGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQTIRKQPMTVYGDGKQTRSFQYVSDLVDGLVALMEGE-  348 (436)
T ss_pred             HHHHHHHHHHHhCCCeEEEEEccccCCCCCCCccchHHHHHHHHhcCCCcEEeCCCCeEEeeEEHHHHHHHHHHHHhcC-
Confidence            8888877776679999999999999997532 12233322  44445553   77888999999999999999999865 


Q ss_pred             CCCceEecCCCccCHHHHHHHHHHHhCCCCCCCCcHHHHHHHhcccceeeecCccccchhHHh-CCCCCCccCHHHHHHH
Q 018503          274 YRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKE-LGFPFKYRYVKDALKA  352 (355)
Q Consensus       274 ~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~-lG~~p~~~~~~~~l~~  352 (355)
                      ..++||+++++.+|+.|+++.+++.+|.+..+......    ..+     .....++++|+++ +||+|+++ ++++|++
T Consensus       349 ~~giyNIgs~~~~Si~ela~~I~~~~g~~~~i~~~p~~----~~~-----~~~~~~d~~Ka~~~LGw~P~~s-l~egl~~  418 (436)
T PLN02166        349 HVGPFNLGNPGEFTMLELAEVVKETIDSSATIEFKPNT----ADD-----PHKRKPDISKAKELLNWEPKIS-LREGLPL  418 (436)
T ss_pred             CCceEEeCCCCcEeHHHHHHHHHHHhCCCCCeeeCCCC----CCC-----ccccccCHHHHHHHcCCCCCCC-HHHHHHH
Confidence            46799999999999999999999999976323221110    011     1233567888865 89999996 9999998


Q ss_pred             Hh
Q 018503          353 IM  354 (355)
Q Consensus       353 ~~  354 (355)
                      ++
T Consensus       419 ~i  420 (436)
T PLN02166        419 MV  420 (436)
T ss_pred             HH
Confidence            76

>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]

Probab=100.00  E-value=3.7e-38  Score=269.10  Aligned_cols=293  Identities=23%  Similarity=0.295  Sum_probs=219.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhc------cCCCCCCccCCCeeecCCcchhhhcCCCcEEEE
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAEL------IFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVN  122 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~------~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~  122 (355)
                      ++|+|+|||||||||++|+++|+++||.|+++.|+++..+.      +............|+.|++++.++++++|.|||
T Consensus         5 ~~~~VcVTGAsGfIgswivk~LL~rGY~V~gtVR~~~~~k~~~~L~~l~~a~~~l~l~~aDL~d~~sf~~ai~gcdgVfH   84 (327)
T KOG1502|consen    5 EGKKVCVTGASGFIGSWIVKLLLSRGYTVRGTVRDPEDEKKTEHLRKLEGAKERLKLFKADLLDEGSFDKAIDGCDGVFH   84 (327)
T ss_pred             CCcEEEEeCCchHHHHHHHHHHHhCCCEEEEEEcCcchhhhHHHHHhcccCcccceEEeccccccchHHHHHhCCCEEEE
Confidence            45799999999999999999999999999999999987322      221111112445799999999999999999999


Q ss_pred             CCCCCCCCCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeC-C--CCCccccCCCCCC--------
Q 018503          123 LAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYG-T--SETEVFDESSPSG--------  191 (355)
Q Consensus       123 ~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg-~--~~~~~~~e~~~~~--------  191 (355)
                      +|.......  .+.+.+..+..+.|+++++++|++. ..++|+||+||.++..+. +  ..+..++|+.+..        
T Consensus        85 ~Asp~~~~~--~~~e~~li~pav~Gt~nVL~ac~~~-~sVkrvV~TSS~aAv~~~~~~~~~~~vvdE~~wsd~~~~~~~~  161 (327)
T KOG1502|consen   85 TASPVDFDL--EDPEKELIDPAVKGTKNVLEACKKT-KSVKRVVYTSSTAAVRYNGPNIGENSVVDEESWSDLDFCRCKK  161 (327)
T ss_pred             eCccCCCCC--CCcHHhhhhHHHHHHHHHHHHHhcc-CCcceEEEeccHHHhccCCcCCCCCcccccccCCcHHHHHhhH
Confidence            998643222  2245589999999999999999995 259999999998875443 2  2334677777643        


Q ss_pred             Chh-HHHHHHHHHHHHhccCCCCeEEEEEecEEEeCCCCc--ccchHHHHHHHhCCCCCCCCcceecccHHHHHHHHHHH
Q 018503          192 NDY-LAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGA--LAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEA  268 (355)
Q Consensus       192 ~~y-~~k~~~~~~~~~~~~~~~~~~~i~Rp~~i~G~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~  268 (355)
                      ..| .+|..+|..+..+..+.+++.+.+-|+.|+||...+  .......++...|..-...+....|+|++|||.+.+.+
T Consensus       162 ~~Y~~sK~lAEkaAw~fa~e~~~~lv~inP~lV~GP~l~~~l~~s~~~~l~~i~G~~~~~~n~~~~~VdVrDVA~AHv~a  241 (327)
T KOG1502|consen  162 LWYALSKTLAEKAAWEFAKENGLDLVTINPGLVFGPGLQPSLNSSLNALLKLIKGLAETYPNFWLAFVDVRDVALAHVLA  241 (327)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCccEEEecCCceECCCcccccchhHHHHHHHHhcccccCCCCceeeEeHHHHHHHHHHH
Confidence            346 888889988888888889999999999999998644  22233444666664433345556699999999999999


Q ss_pred             HhCCCCCCceEecCCCccCHHHHHHHHHHHhCCCCCCCCcHHHHHHHhcccceeeecCccccchhHHhCC-CCCCccCHH
Q 018503          269 LSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKELG-FPFKYRYVK  347 (355)
Q Consensus       269 ~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~lG-~~p~~~~~~  347 (355)
                      ++++...|.|.+.+.. .++.|+++.+.+.+..-   ++|.....     ..........++++|++++| |+++  +++
T Consensus       242 ~E~~~a~GRyic~~~~-~~~~ei~~~l~~~~P~~---~ip~~~~~-----~~~~~~~~~~~~~~k~k~lg~~~~~--~l~  310 (327)
T KOG1502|consen  242 LEKPSAKGRYICVGEV-VSIKEIADILRELFPDY---PIPKKNAE-----EHEGFLTSFKVSSEKLKSLGGFKFR--PLE  310 (327)
T ss_pred             HcCcccCceEEEecCc-ccHHHHHHHHHHhCCCC---CCCCCCCc-----cccccccccccccHHHHhcccceec--ChH
Confidence            9999999999887765 67999999999988532   23222111     11112233367889999998 6655  699


Q ss_pred             HHHHHHhC
Q 018503          348 DALKAIMS  355 (355)
Q Consensus       348 ~~l~~~~~  355 (355)
                      |.+.++++
T Consensus       311 e~~~dt~~  318 (327)
T KOG1502|consen  311 ETLSDTVE  318 (327)
T ss_pred             HHHHHHHH
Confidence            99988863

>PLN02427 UDP-apiose/xylose synthase

Probab=100.00  E-value=3.7e-38  Score=288.76  Aligned_cols=295  Identities=19%  Similarity=0.259  Sum_probs=208.6

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhC-CCeEEEEecCCchhhccCCCC-----CCccCCCeeecCCcchhhhcCCCcEEEEC
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQAD-NHQVRVLTRSRSKAELIFPGK-----KTRFFPGVMIAEEPQWRDCIQGSTAVVNL  123 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~d~~~~~~~~~~~~~~d~vi~~  123 (355)
                      +|||||||||||||++|+++|+++ |++|++++|+......+....     ....+...|+.|.+.+.++++++|+|||+
T Consensus        14 ~~~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~d~ViHl   93 (386)
T PLN02427         14 PLTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLLEPDTVPWSGRIQFHRINIKHDSRLEGLIKMADLTINL   93 (386)
T ss_pred             CcEEEEECCcchHHHHHHHHHHhcCCCEEEEEecCchhhhhhhccccccCCCCeEEEEcCCCChHHHHHHhhcCCEEEEc
Confidence            479999999999999999999998 599999998765433322110     00113346888999999999999999999


Q ss_pred             CCCCCCCCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCCCCccccCCCC--------------
Q 018503          124 AGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSP--------------  189 (355)
Q Consensus       124 a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~--------------  189 (355)
                      |+......+. ..+.+.+..|+.++.+++++|++  .+ ++|||+||.++  ||...+.+.+|+.+              
T Consensus        94 Aa~~~~~~~~-~~~~~~~~~n~~gt~~ll~aa~~--~~-~r~v~~SS~~v--Yg~~~~~~~~e~~p~~~~~~~~~~~e~~  167 (386)
T PLN02427         94 AAICTPADYN-TRPLDTIYSNFIDALPVVKYCSE--NN-KRLIHFSTCEV--YGKTIGSFLPKDHPLRQDPAFYVLKEDE  167 (386)
T ss_pred             ccccChhhhh-hChHHHHHHHHHHHHHHHHHHHh--cC-CEEEEEeeeee--eCCCcCCCCCcccccccccccccccccc
Confidence            9975332222 23445567899999999999988  55 79999999998  98643322222211              


Q ss_pred             ----------CCChh-HHHHHHHHHHHHhccCCCCeEEEEEecEEEeCCCCc----------ccchHHHH--HHHhCCCC
Q 018503          190 ----------SGNDY-LAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGA----------LAKMIPLF--MMFAGGPL  246 (355)
Q Consensus       190 ----------~~~~y-~~k~~~~~~~~~~~~~~~~~~~i~Rp~~i~G~~~~~----------~~~~~~~~--~~~~~~~~  246 (355)
                                +...| .+|...|.....+...++++++++||+++||++...          ...++..+  ....++++
T Consensus       168 ~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~  247 (386)
T PLN02427        168 SPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRREPL  247 (386)
T ss_pred             cccccCCCCccccchHHHHHHHHHHHHHHHhhcCCceEEecccceeCCCCCccccccccccccchHHHHHHHHHhcCCCe
Confidence                      12357 788888888777766679999999999999997421          12233322  33455553


Q ss_pred             ---CCCCcceecccHHHHHHHHHHHHhCCC--CCCceEecCC-CccCHHHHHHHHHHHhCCCCCC--------CCcHHHH
Q 018503          247 ---GSGQQWFSWIHLDDIVNLIYEALSNPS--YRGVINGTAP-NPVRLAEMCDHLGNVLGRPSWL--------PVPEFAL  312 (355)
Q Consensus       247 ---~~~~~~~~~i~v~Dva~~~~~~~~~~~--~~~~~~i~~~-~~~s~~el~~~i~~~~g~~~~~--------~~~~~~~  312 (355)
                         +++++.++|+|++|+|++++.+++++.  .+++||++++ +++|+.|+++.+.+.+|.....        ..+... 
T Consensus       248 ~~~g~g~~~r~~i~V~Dva~ai~~al~~~~~~~g~~yni~~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~-  326 (386)
T PLN02427        248 KLVDGGQSQRTFVYIKDAIEAVLLMIENPARANGHIFNVGNPNNEVTVRQLAEMMTEVYAKVSGEPALEEPTVDVSSKE-  326 (386)
T ss_pred             EEECCCCceECcEeHHHHHHHHHHHHhCcccccCceEEeCCCCCCccHHHHHHHHHHHhccccccccccccccccCccc-
Confidence               667888999999999999999998753  3459999997 5899999999999999852100        111100 


Q ss_pred             HHHhcccceeeecCccccchhHHh-CCCCCCccCHHHHHHHHhC
Q 018503          313 KAVLGEGAFVVLEGQRVVPARAKE-LGFPFKYRYVKDALKAIMS  355 (355)
Q Consensus       313 ~~~~~~~~~~~~~~~~~~~~k~~~-lG~~p~~~~~~~~l~~~~~  355 (355)
                        ..+. ...-......+.+|+++ +||+|+++ ++++|+++++
T Consensus       327 --~~~~-~~~~~~~~~~d~~k~~~~lGw~p~~~-l~~gl~~~~~  366 (386)
T PLN02427        327 --FYGE-GYDDSDKRIPDMTIINKQLGWNPKTS-LWDLLESTLT  366 (386)
T ss_pred             --ccCc-cccchhhccCCHHHHHHhcCCCcCcc-HHHHHHHHHH
Confidence              0000 00011223446677865 99999996 9999999873

>PLN02572 UDP-sulfoquinovose synthase

Probab=100.00  E-value=4.7e-38  Score=290.39  Aligned_cols=295  Identities=18%  Similarity=0.174  Sum_probs=207.4

Q ss_pred             cccCCCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhc-------c-------------CC-CCCCccCCCee
Q 018503           45 TQKASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAEL-------I-------------FP-GKKTRFFPGVM  103 (355)
Q Consensus        45 ~~~~~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-------~-------------~~-~~~~~~~~~~d  103 (355)
                      +...++|+||||||+||||++|+++|+++|++|++++|.......       .             .. ......+..+|
T Consensus        42 ~~~~~~k~VLVTGatGfIGs~Lv~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~v~~D  121 (442)
T PLN02572         42 SSSSKKKKVMVIGGDGYCGWATALHLSKRGYEVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWKEVSGKEIELYVGD  121 (442)
T ss_pred             CccccCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeccccccccccccccccccccchHHHHHHHHHhhCCcceEEECC
Confidence            344566899999999999999999999999999998753221100       0             00 00000134578


Q ss_pred             ecCCcchhhhcC--CCcEEEECCCCCCCC--CCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCC-cEEEEeeeeeeeeCC
Q 018503          104 IAEEPQWRDCIQ--GSTAVVNLAGTPIGT--RWSSEIKKEIKESRIRVTSKVVDLINESPEGVR-PSVLVSATALGYYGT  178 (355)
Q Consensus       104 ~~~~~~~~~~~~--~~d~vi~~a~~~~~~--~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~-~~v~~Ss~~~~~yg~  178 (355)
                      +.|.+.+.++++  ++|+|||+|+.....  ..........+++|+.++.+++++|++  .+++ +||++||..+  ||.
T Consensus       122 l~d~~~v~~~l~~~~~D~ViHlAa~~~~~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~--~gv~~~~V~~SS~~v--YG~  197 (442)
T PLN02572        122 ICDFEFLSEAFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAIKE--FAPDCHLVKLGTMGE--YGT  197 (442)
T ss_pred             CCCHHHHHHHHHhCCCCEEEECCCcccChhhhcChhhHHHHHHHHHHHHHHHHHHHHH--hCCCccEEEEeccee--cCC
Confidence            889999998887  589999999764221  112223355678999999999999998  6775 8999999998  985


Q ss_pred             CCCcccc-----------CCC---C--CCChh-HHHHHHHHHHHHhccCCCCeEEEEEecEEEeCCCCcc----------
Q 018503          179 SETEVFD-----------ESS---P--SGNDY-LAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGAL----------  231 (355)
Q Consensus       179 ~~~~~~~-----------e~~---~--~~~~y-~~k~~~~~~~~~~~~~~~~~~~i~Rp~~i~G~~~~~~----------  231 (355)
                      .. .+.+           |++   +  +.+.| .+|...|.+...+...+|++++++||+++|||+....          
T Consensus       198 ~~-~~~~E~~i~~~~~~~e~~~~~~~~P~s~Yg~SK~a~E~l~~~~~~~~gl~~v~lR~~~vyGp~~~~~~~~~~li~~~  276 (442)
T PLN02572        198 PN-IDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVRTDETMMDEELINRL  276 (442)
T ss_pred             CC-CCCcccccccccccccccccCCCCCCCcchhHHHHHHHHHHHHHHhcCCCEEEEecccccCCCCccccccccccccc
Confidence            42 1121           121   2  23568 8898888888888887899999999999999975321          


Q ss_pred             ------cchHHHH--HHHhCCCC---CCCCcceecccHHHHHHHHHHHHhCCCC-C--CceEecCCCccCHHHHHHHHHH
Q 018503          232 ------AKMIPLF--MMFAGGPL---GSGQQWFSWIHLDDIVNLIYEALSNPSY-R--GVINGTAPNPVRLAEMCDHLGN  297 (355)
Q Consensus       232 ------~~~~~~~--~~~~~~~~---~~~~~~~~~i~v~Dva~~~~~~~~~~~~-~--~~~~i~~~~~~s~~el~~~i~~  297 (355)
                            ...++.+  +...++++   +++++.|+|+|++|+|++++.+++++.. +  ++||+++ +.+|+.|+++.+++
T Consensus       277 ~~~~~~~~~i~~~~~~~~~g~~i~v~g~G~~~Rdfi~V~Dva~a~~~al~~~~~~g~~~i~Nigs-~~~si~el~~~i~~  355 (442)
T PLN02572        277 DYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGFLDIRDTVRCIEIAIANPAKPGEFRVFNQFT-EQFSVNELAKLVTK  355 (442)
T ss_pred             CcccchhhHHHHHHHHHhcCCCceecCCCCEEECeEEHHHHHHHHHHHHhChhhcCceeEEEeCC-CceeHHHHHHHHHH
Confidence                  1222222  44456553   7889999999999999999999986532 2  3799976 67999999999999


Q ss_pred             H---hCCCCCC-CCcHHHHHHHhcccceeeecCccccchhHHhCCCCCCc---cCHHHHHHHHh
Q 018503          298 V---LGRPSWL-PVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPFKY---RYVKDALKAIM  354 (355)
Q Consensus       298 ~---~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~lG~~p~~---~~~~~~l~~~~  354 (355)
                      .   +|.+..+ ..|...     .+   ........+.+|+++|||+|++   + +.++|.+++
T Consensus       356 ~~~~~g~~~~~~~~p~~~-----~~---~~~~~~~~d~~k~~~LGw~p~~~~~~-l~~~l~~~~  410 (442)
T PLN02572        356 AGEKLGLDVEVISVPNPR-----VE---AEEHYYNAKHTKLCELGLEPHLLSDS-LLDSLLNFA  410 (442)
T ss_pred             HHHhhCCCCCeeeCCCCc-----cc---ccccccCccHHHHHHcCCCCCCcHHH-HHHHHHHHH
Confidence            9   8865222 112110     01   0112334566778889999998   6 888888775

>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional

Probab=100.00  E-value=7.3e-38  Score=282.96  Aligned_cols=295  Identities=17%  Similarity=0.221  Sum_probs=209.6

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhC-CCeEEEEecCCchhhccCCCCCCccCCCeeec-CCcchhhhcCCCcEEEECCCCCC
Q 018503           51 MTVSVTGATGFIGRRLVQRLQAD-NHQVRVLTRSRSKAELIFPGKKTRFFPGVMIA-EEPQWRDCIQGSTAVVNLAGTPI  128 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~-~~~~~~~~~~~~d~vi~~a~~~~  128 (355)
                      |+|||||||||||++|+++|++. ||+|++++|+......+..... ..+...|+. +.+.+.++++++|+|||+|+...
T Consensus         2 ~~ilVtGatGfiGs~l~~~L~~~~~~~V~~~~r~~~~~~~~~~~~~-~~~~~~Dl~~~~~~~~~~~~~~d~ViH~aa~~~   80 (347)
T PRK11908          2 KKVLILGVNGFIGHHLSKRILETTDWEVYGMDMQTDRLGDLVNHPR-MHFFEGDITINKEWIEYHVKKCDVILPLVAIAT   80 (347)
T ss_pred             cEEEEECCCcHHHHHHHHHHHhCCCCeEEEEeCcHHHHHHhccCCC-eEEEeCCCCCCHHHHHHHHcCCCEEEECcccCC
Confidence            68999999999999999999986 7999999997654332222110 013346776 55677788889999999998743


Q ss_pred             CCCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCCCCccccCCCC---------CCChh-HHHH
Q 018503          129 GTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSP---------SGNDY-LAEV  198 (355)
Q Consensus       129 ~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~---------~~~~y-~~k~  198 (355)
                      ... ...++...+++|+.++.+++++|++  .+ +++||+||..+  ||...+.+++|+.+         +...| .+|.
T Consensus        81 ~~~-~~~~p~~~~~~n~~~~~~ll~aa~~--~~-~~~v~~SS~~v--yg~~~~~~~~ee~~~~~~~~~~~p~~~Y~~sK~  154 (347)
T PRK11908         81 PAT-YVKQPLRVFELDFEANLPIVRSAVK--YG-KHLVFPSTSEV--YGMCPDEEFDPEASPLVYGPINKPRWIYACSKQ  154 (347)
T ss_pred             hHH-hhcCcHHHHHHHHHHHHHHHHHHHh--cC-CeEEEEeccee--eccCCCcCcCccccccccCcCCCccchHHHHHH
Confidence            221 2345667889999999999999998  55 79999999998  98655555655542         22357 8888


Q ss_pred             HHHHHHHHhccCCCCeEEEEEecEEEeCCCCc-------ccchHHHH--HHHhCCCC---CCCCcceecccHHHHHHHHH
Q 018503          199 CREWEGTALKVNKDVRLALIRIGIVLGKDGGA-------LAKMIPLF--MMFAGGPL---GSGQQWFSWIHLDDIVNLIY  266 (355)
Q Consensus       199 ~~~~~~~~~~~~~~~~~~i~Rp~~i~G~~~~~-------~~~~~~~~--~~~~~~~~---~~~~~~~~~i~v~Dva~~~~  266 (355)
                      ..|.....+....+++++++||+++||++...       ...+++.+  ....+.++   +.+++.++|+|++|+|++++
T Consensus       155 ~~e~~~~~~~~~~~~~~~ilR~~~v~Gp~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~g~~~r~~i~v~D~a~a~~  234 (347)
T PRK11908        155 LMDRVIWAYGMEEGLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGEPISLVDGGSQKRAFTDIDDGIDALM  234 (347)
T ss_pred             HHHHHHHHHHHHcCCCeEEEeeeeeeCCCccCCCccccCCcchHHHHHHHHhCCCceEEecCCceeeccccHHHHHHHHH
Confidence            88888877776679999999999999997432       12234333  44455553   56788999999999999999


Q ss_pred             HHHhCCC---CCCceEecCC-CccCHHHHHHHHHHHhCCCCCCCCcHHHHH------H-HhcccceeeecCccccchhHH
Q 018503          267 EALSNPS---YRGVINGTAP-NPVRLAEMCDHLGNVLGRPSWLPVPEFALK------A-VLGEGAFVVLEGQRVVPARAK  335 (355)
Q Consensus       267 ~~~~~~~---~~~~~~i~~~-~~~s~~el~~~i~~~~g~~~~~~~~~~~~~------~-~~~~~~~~~~~~~~~~~~k~~  335 (355)
                      .+++++.   .+++||++++ +.+|+.|+++.+.+.+|..+.+........      . ..+... ........+.+|++
T Consensus       235 ~~~~~~~~~~~g~~yni~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~d~~k~~  313 (347)
T PRK11908        235 KIIENKDGVASGKIYNIGNPKNNHSVRELANKMLELAAEYPEYAESAKKVKLVETTSGAYYGKGY-QDVQNRVPKIDNTM  313 (347)
T ss_pred             HHHhCccccCCCCeEEeCCCCCCcCHHHHHHHHHHHhcCcccccccccccccccCCchhccCcCc-chhccccCChHHHH
Confidence            9998753   3569999987 579999999999999986432211000000      0 000000 00112223456674


Q ss_pred             -hCCCCCCccCHHHHHHHHh
Q 018503          336 -ELGFPFKYRYVKDALKAIM  354 (355)
Q Consensus       336 -~lG~~p~~~~~~~~l~~~~  354 (355)
                       .+||.|+++ ++++|++++
T Consensus       314 ~~lGw~p~~~-l~~~l~~~~  332 (347)
T PRK11908        314 QELGWAPKTT-MDDALRRIF  332 (347)
T ss_pred             HHcCCCCCCc-HHHHHHHHH
Confidence             699999997 999999986

>PLN02206 UDP-glucuronate decarboxylase

Probab=100.00  E-value=4.2e-38  Score=289.84  Aligned_cols=287  Identities=18%  Similarity=0.210  Sum_probs=212.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhc-cCCCCCCccCCCeeecCCcchhhhcCCCcEEEECCCCC
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAEL-IFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTP  127 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~~  127 (355)
                      ..|||||||||||||++|++.|+++|++|++++|....... ......   ...+++.+.|.+.+++.++|+|||+|+..
T Consensus       118 ~~~kILVTGatGfIGs~Lv~~Ll~~G~~V~~ld~~~~~~~~~~~~~~~---~~~~~~i~~D~~~~~l~~~D~ViHlAa~~  194 (442)
T PLN02206        118 KGLRVVVTGGAGFVGSHLVDRLMARGDSVIVVDNFFTGRKENVMHHFS---NPNFELIRHDVVEPILLEVDQIYHLACPA  194 (442)
T ss_pred             CCCEEEEECcccHHHHHHHHHHHHCcCEEEEEeCCCccchhhhhhhcc---CCceEEEECCccChhhcCCCEEEEeeeec
Confidence            45899999999999999999999999999999875432111 100000   23456666666666777899999999864


Q ss_pred             CCCCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCCCCccccCCC-----CC--CChh-HHHHH
Q 018503          128 IGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESS-----PS--GNDY-LAEVC  199 (355)
Q Consensus       128 ~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~-----~~--~~~y-~~k~~  199 (355)
                      ... ....++...+++|+.++.+|+++|++  .++ +|||+||..+  ||.....+.+|+.     |.  .+.| .+|..
T Consensus       195 ~~~-~~~~~p~~~~~~Nv~gt~nLleaa~~--~g~-r~V~~SS~~V--Yg~~~~~p~~E~~~~~~~P~~~~s~Y~~SK~~  268 (442)
T PLN02206        195 SPV-HYKFNPVKTIKTNVVGTLNMLGLAKR--VGA-RFLLTSTSEV--YGDPLQHPQVETYWGNVNPIGVRSCYDEGKRT  268 (442)
T ss_pred             chh-hhhcCHHHHHHHHHHHHHHHHHHHHH--hCC-EEEEECChHH--hCCCCCCCCCccccccCCCCCccchHHHHHHH
Confidence            322 22335678889999999999999998  565 8999999998  9876656666653     22  3457 78888


Q ss_pred             HHHHHHHhccCCCCeEEEEEecEEEeCCCCc-ccchHHHH--HHHhCCCC---CCCCcceecccHHHHHHHHHHHHhCCC
Q 018503          200 REWEGTALKVNKDVRLALIRIGIVLGKDGGA-LAKMIPLF--MMFAGGPL---GSGQQWFSWIHLDDIVNLIYEALSNPS  273 (355)
Q Consensus       200 ~~~~~~~~~~~~~~~~~i~Rp~~i~G~~~~~-~~~~~~~~--~~~~~~~~---~~~~~~~~~i~v~Dva~~~~~~~~~~~  273 (355)
                      .|.+...+....+++++++||+++||++... ...+++.+  +...++++   +++++.++|+|++|+|++++.+++.+ 
T Consensus       269 aE~~~~~y~~~~g~~~~ilR~~~vyGp~~~~~~~~~v~~~i~~~l~~~~i~i~g~G~~~rdfi~V~Dva~ai~~a~e~~-  347 (442)
T PLN02206        269 AETLTMDYHRGANVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLMEGE-  347 (442)
T ss_pred             HHHHHHHHHHHhCCCeEEEEeccccCCCCCccccchHHHHHHHHHcCCCcEEeCCCCEEEeEEeHHHHHHHHHHHHhcC-
Confidence            8887777766679999999999999997431 11233222  34445543   67888999999999999999999865 


Q ss_pred             CCCceEecCCCccCHHHHHHHHHHHhCCCCCCCCcHHHHHHHhcccceeeecCccccchhHHh-CCCCCCccCHHHHHHH
Q 018503          274 YRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKE-LGFPFKYRYVKDALKA  352 (355)
Q Consensus       274 ~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~-lG~~p~~~~~~~~l~~  352 (355)
                      ..+.||+++++++|+.|+++.+++.+|.+..+......    ..+     .....++++|+++ +||+|+++ ++|+|++
T Consensus       348 ~~g~yNIgs~~~~sl~Elae~i~~~~g~~~~i~~~p~~----~~~-----~~~~~~d~sKa~~~LGw~P~~~-l~egl~~  417 (442)
T PLN02206        348 HVGPFNLGNPGEFTMLELAKVVQETIDPNAKIEFRPNT----EDD-----PHKRKPDITKAKELLGWEPKVS-LRQGLPL  417 (442)
T ss_pred             CCceEEEcCCCceeHHHHHHHHHHHhCCCCceeeCCCC----CCC-----ccccccCHHHHHHHcCCCCCCC-HHHHHHH
Confidence            46799999999999999999999999865322211100    011     1233567788864 99999996 9999998


Q ss_pred             HhC
Q 018503          353 IMS  355 (355)
Q Consensus       353 ~~~  355 (355)
                      +++
T Consensus       418 ~~~  420 (442)
T PLN02206        418 MVK  420 (442)
T ss_pred             HHH
Confidence            863

>PLN02214 cinnamoyl-CoA reductase

Probab=100.00  E-value=1.1e-37  Score=280.45  Aligned_cols=286  Identities=19%  Similarity=0.228  Sum_probs=210.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhh-----ccCCCCCCccCCCeeecCCcchhhhcCCCcEEEEC
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAE-----LIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNL  123 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-----~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~  123 (355)
                      ++|+||||||+||||++|+++|+++||+|++++|+.+...     .+........+...|+.|.+.+.++++++|+|||+
T Consensus         9 ~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~   88 (342)
T PLN02214          9 AGKTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPDDPKNTHLRELEGGKERLILCKADLQDYEALKAAIDGCDGVFHT   88 (342)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCchhhhHHHHHHhhCCCCcEEEEecCcCChHHHHHHHhcCCEEEEe
Confidence            4578999999999999999999999999999999865321     11110000013346888999999999999999999


Q ss_pred             CCCCCCCCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeee-eeeeCCCCC---ccccCCCC--------CC
Q 018503          124 AGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATA-LGYYGTSET---EVFDESSP--------SG  191 (355)
Q Consensus       124 a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~-~~~yg~~~~---~~~~e~~~--------~~  191 (355)
                      |+..      ...+...++.|+.++.+++++|++  .++++|||+||.. +  ||....   .+++|+++        +.
T Consensus        89 A~~~------~~~~~~~~~~nv~gt~~ll~aa~~--~~v~r~V~~SS~~av--yg~~~~~~~~~~~E~~~~~~~~~~~p~  158 (342)
T PLN02214         89 ASPV------TDDPEQMVEPAVNGAKFVINAAAE--AKVKRVVITSSIGAV--YMDPNRDPEAVVDESCWSDLDFCKNTK  158 (342)
T ss_pred             cCCC------CCCHHHHHHHHHHHHHHHHHHHHh--cCCCEEEEeccceee--eccCCCCCCcccCcccCCChhhccccc
Confidence            9863      123567889999999999999998  7889999999964 5  874322   24677642        23


Q ss_pred             Chh-HHHHHHHHHHHHhccCCCCeEEEEEecEEEeCCCCcc--cchHHHHHHHhCCCCCCCCcceecccHHHHHHHHHHH
Q 018503          192 NDY-LAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGAL--AKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEA  268 (355)
Q Consensus       192 ~~y-~~k~~~~~~~~~~~~~~~~~~~i~Rp~~i~G~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~  268 (355)
                      ..| .+|...|.+...+..+.+++++++||+++|||+....  ..+...+....+.....++..++|||++|+|++++.+
T Consensus       159 ~~Y~~sK~~aE~~~~~~~~~~g~~~v~lRp~~vyGp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~i~V~Dva~a~~~a  238 (342)
T PLN02214        159 NWYCYGKMVAEQAAWETAKEKGVDLVVLNPVLVLGPPLQPTINASLYHVLKYLTGSAKTYANLTQAYVDVRDVALAHVLV  238 (342)
T ss_pred             cHHHHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCCCCCCchHHHHHHHHcCCcccCCCCCcCeeEHHHHHHHHHHH
Confidence            468 8898888888877777799999999999999975321  1122223444454443456678999999999999999


Q ss_pred             HhCCCCCCceEecCCCccCHHHHHHHHHHHhCCCCCCCCcHHHHHHHhcccceeeecCccccchhHHhCCCCCCccCHHH
Q 018503          269 LSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPFKYRYVKD  348 (355)
Q Consensus       269 ~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~lG~~p~~~~~~~  348 (355)
                      ++++..++.||+++ ..+++.|+++.+.+.++..   ++|........+     ......++++|+++|||+|+  +++|
T Consensus       239 l~~~~~~g~yn~~~-~~~~~~el~~~i~~~~~~~---~~~~~~~~~~~~-----~~~~~~~d~~k~~~LG~~p~--~lee  307 (342)
T PLN02214        239 YEAPSASGRYLLAE-SARHRGEVVEILAKLFPEY---PLPTKCKDEKNP-----RAKPYKFTNQKIKDLGLEFT--STKQ  307 (342)
T ss_pred             HhCcccCCcEEEec-CCCCHHHHHHHHHHHCCCC---CCCCCCccccCC-----CCCccccCcHHHHHcCCccc--CHHH
Confidence            99876667999987 4689999999999998632   122111000000     11234578888888999995  5999


Q ss_pred             HHHHHhC
Q 018503          349 ALKAIMS  355 (355)
Q Consensus       349 ~l~~~~~  355 (355)
                      +|+++++
T Consensus       308 ~i~~~~~  314 (342)
T PLN02214        308 SLYDTVK  314 (342)
T ss_pred             HHHHHHH
Confidence            9999863

>PLN02695 GDP-D-mannose-3',5'-epimerase

Probab=100.00  E-value=3.2e-37  Score=279.84  Aligned_cols=288  Identities=19%  Similarity=0.233  Sum_probs=210.2

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcCCCcEEEECCCCC
Q 018503           48 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTP  127 (355)
Q Consensus        48 ~~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~~  127 (355)
                      ..+|+|||||||||||++|++.|+++||+|++++|............  ......|+.|.+.+.++++++|+|||+|+..
T Consensus        19 ~~~~~IlVtGgtGfIG~~l~~~L~~~G~~V~~v~r~~~~~~~~~~~~--~~~~~~Dl~d~~~~~~~~~~~D~Vih~Aa~~   96 (370)
T PLN02695         19 SEKLRICITGAGGFIASHIARRLKAEGHYIIASDWKKNEHMSEDMFC--HEFHLVDLRVMENCLKVTKGVDHVFNLAADM   96 (370)
T ss_pred             CCCCEEEEECCccHHHHHHHHHHHhCCCEEEEEEecccccccccccc--ceEEECCCCCHHHHHHHHhCCCEEEEccccc
Confidence            35689999999999999999999999999999999653211110000  0133458888888888888999999999864


Q ss_pred             CCCCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCCCC----ccccCCC--C--CCChh-HHHH
Q 018503          128 IGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSET----EVFDESS--P--SGNDY-LAEV  198 (355)
Q Consensus       128 ~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~~----~~~~e~~--~--~~~~y-~~k~  198 (355)
                      .........+...+..|+.++.+++++|++  .++++|||+||.++  ||....    .++.|+.  +  +...| .+|.
T Consensus        97 ~~~~~~~~~~~~~~~~N~~~t~nll~aa~~--~~vk~~V~~SS~~v--Yg~~~~~~~~~~~~E~~~~p~~p~s~Yg~sK~  172 (370)
T PLN02695         97 GGMGFIQSNHSVIMYNNTMISFNMLEAARI--NGVKRFFYASSACI--YPEFKQLETNVSLKESDAWPAEPQDAYGLEKL  172 (370)
T ss_pred             CCccccccCchhhHHHHHHHHHHHHHHHHH--hCCCEEEEeCchhh--cCCccccCcCCCcCcccCCCCCCCCHHHHHHH
Confidence            322222223345667899999999999998  78899999999998  985432    2355543  2  34578 8888


Q ss_pred             HHHHHHHHhccCCCCeEEEEEecEEEeCCCCccc---chHHHH--HHHh-CCCC---CCCCcceecccHHHHHHHHHHHH
Q 018503          199 CREWEGTALKVNKDVRLALIRIGIVLGKDGGALA---KMIPLF--MMFA-GGPL---GSGQQWFSWIHLDDIVNLIYEAL  269 (355)
Q Consensus       199 ~~~~~~~~~~~~~~~~~~i~Rp~~i~G~~~~~~~---~~~~~~--~~~~-~~~~---~~~~~~~~~i~v~Dva~~~~~~~  269 (355)
                      ..|.....+....+++++++||+++|||+.....   ...+.+  .... +.++   +++++.++|+|++|++++++.++
T Consensus       173 ~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~g~~~r~~i~v~D~a~ai~~~~  252 (370)
T PLN02695        173 ATEELCKHYTKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDEFEMWGDGKQTRSFTFIDECVEGVLRLT  252 (370)
T ss_pred             HHHHHHHHHHHHhCCCEEEEEECCccCCCCCccccccccHHHHHHHHHcCCCCeEEeCCCCeEEeEEeHHHHHHHHHHHH
Confidence            8888777776667999999999999999653211   112222  2222 2333   78899999999999999999988


Q ss_pred             hCCCCCCceEecCCCccCHHHHHHHHHHHhCCCCCC-CCcHHHHHHHhcccceeeecCccccchhHHh-CCCCCCccCHH
Q 018503          270 SNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWL-PVPEFALKAVLGEGAFVVLEGQRVVPARAKE-LGFPFKYRYVK  347 (355)
Q Consensus       270 ~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~-lG~~p~~~~~~  347 (355)
                      +.+ ..+.||+++++++|+.|+++.+.+..|++..+ ..|..     .+.      .....+++|+++ +||+|+++ ++
T Consensus       253 ~~~-~~~~~nv~~~~~~s~~el~~~i~~~~g~~~~i~~~~~~-----~~~------~~~~~d~sk~~~~lgw~p~~~-l~  319 (370)
T PLN02695        253 KSD-FREPVNIGSDEMVSMNEMAEIALSFENKKLPIKHIPGP-----EGV------RGRNSDNTLIKEKLGWAPTMR-LK  319 (370)
T ss_pred             hcc-CCCceEecCCCceeHHHHHHHHHHHhCCCCCceecCCC-----CCc------cccccCHHHHHHhcCCCCCCC-HH
Confidence            865 46799999999999999999999999875322 11110     000      123467888865 89999996 99


Q ss_pred             HHHHHHh
Q 018503          348 DALKAIM  354 (355)
Q Consensus       348 ~~l~~~~  354 (355)
                      ++|++++
T Consensus       320 e~i~~~~  326 (370)
T PLN02695        320 DGLRITY  326 (370)
T ss_pred             HHHHHHH
Confidence            9999986

>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional

Probab=100.00  E-value=6.7e-37  Score=277.80  Aligned_cols=300  Identities=17%  Similarity=0.220  Sum_probs=212.2

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhCCCeEEEE-ecCCchhh--ccCC--CCCCccCCCeeecCCcchhhhcC--CCcEEEEC
Q 018503           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVL-TRSRSKAE--LIFP--GKKTRFFPGVMIAEEPQWRDCIQ--GSTAVVNL  123 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~g~~V~~~-~r~~~~~~--~~~~--~~~~~~~~~~d~~~~~~~~~~~~--~~d~vi~~  123 (355)
                      |+|||||||||||+++++.|+++|++++++ +|......  ....  ......+..+|+.|.+.+.++++  ++|+|||+
T Consensus         2 ~~vlVtGatGfIG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~D~Vih~   81 (355)
T PRK10217          2 RKILITGGAGFIGSALVRYIINETSDAVVVVDKLTYAGNLMSLAPVAQSERFAFEKVDICDRAELARVFTEHQPDCVMHL   81 (355)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHHcCCCEEEEEecCccccchhhhhhcccCCceEEEECCCcChHHHHHHHhhcCCCEEEEC
Confidence            689999999999999999999999876554 44322111  1100  00001133578889999999887  48999999


Q ss_pred             CCCCCCCCCChhhHHHHHHHhhhhHHHHHHHHHcC-------CCCCCcEEEEeeeeeeeeCCCC--CccccCCCC--CCC
Q 018503          124 AGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINES-------PEGVRPSVLVSATALGYYGTSE--TEVFDESSP--SGN  192 (355)
Q Consensus       124 a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-------~~~~~~~v~~Ss~~~~~yg~~~--~~~~~e~~~--~~~  192 (355)
                      ||.... ......+..++++|+.++.+++++|.+.       ..+++++|++||.++  ||...  ..+++|+.+  +..
T Consensus        82 A~~~~~-~~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~~~~~~~~i~~SS~~v--yg~~~~~~~~~~E~~~~~p~s  158 (355)
T PRK10217         82 AAESHV-DRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDEV--YGDLHSTDDFFTETTPYAPSS  158 (355)
T ss_pred             CcccCc-chhhhChHHHHHHhhHHHHHHHHHHHHhhhcccccccCceEEEEecchhh--cCCCCCCCCCcCCCCCCCCCC
Confidence            997422 2223456788999999999999999751       124679999999998  88532  345677655  345


Q ss_pred             hh-HHHHHHHHHHHHhccCCCCeEEEEEecEEEeCCCCcccchHHHH--HHHhCCCC---CCCCcceecccHHHHHHHHH
Q 018503          193 DY-LAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLF--MMFAGGPL---GSGQQWFSWIHLDDIVNLIY  266 (355)
Q Consensus       193 ~y-~~k~~~~~~~~~~~~~~~~~~~i~Rp~~i~G~~~~~~~~~~~~~--~~~~~~~~---~~~~~~~~~i~v~Dva~~~~  266 (355)
                      .| .+|...|.....+..+.+++++++||+++|||+... ..+++.+  +...+.++   +++++.++|+|++|+|++++
T Consensus       159 ~Y~~sK~~~e~~~~~~~~~~~~~~~i~r~~~v~Gp~~~~-~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~D~a~a~~  237 (355)
T PRK10217        159 PYSASKASSDHLVRAWLRTYGLPTLITNCSNNYGPYHFP-EKLIPLMILNALAGKPLPVYGNGQQIRDWLYVEDHARALY  237 (355)
T ss_pred             hhHHHHHHHHHHHHHHHHHhCCCeEEEeeeeeeCCCCCc-ccHHHHHHHHHhcCCCceEeCCCCeeeCcCcHHHHHHHHH
Confidence            68 888888888887777779999999999999998532 2233333  33445543   78899999999999999999


Q ss_pred             HHHhCCCCCCceEecCCCccCHHHHHHHHHHHhCCC-CCCCCcHHHHHHHhc--ccceeeecCccccchhHH-hCCCCCC
Q 018503          267 EALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRP-SWLPVPEFALKAVLG--EGAFVVLEGQRVVPARAK-ELGFPFK  342 (355)
Q Consensus       267 ~~~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~-~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~k~~-~lG~~p~  342 (355)
                      .++..+..+++||+++++++|+.|+++.+++.+|+. +..+.+.........  ...........++++|++ +|||.|+
T Consensus       238 ~~~~~~~~~~~yni~~~~~~s~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lg~~p~  317 (355)
T PRK10217        238 CVATTGKVGETYNIGGHNERKNLDVVETICELLEELAPNKPQGVAHYRDLITFVADRPGHDLRYAIDASKIARELGWLPQ  317 (355)
T ss_pred             HHHhcCCCCCeEEeCCCCcccHHHHHHHHHHHhcccccccccccccccccceecCCCCCCCcccccCHHHHHHhcCCCCc
Confidence            999876556799999999999999999999999864 212211100000000  000000112356788884 5999999


Q ss_pred             ccCHHHHHHHHhC
Q 018503          343 YRYVKDALKAIMS  355 (355)
Q Consensus       343 ~~~~~~~l~~~~~  355 (355)
                      ++ ++|+|+++++
T Consensus       318 ~~-l~e~l~~~~~  329 (355)
T PRK10217        318 ET-FESGMRKTVQ  329 (355)
T ss_pred             Cc-HHHHHHHHHH
Confidence            96 9999999863

>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional

Probab=100.00  E-value=1.5e-36  Score=270.22  Aligned_cols=280  Identities=15%  Similarity=0.213  Sum_probs=199.1

Q ss_pred             EEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCC---cc-hhhhc-----CCCcEEEEC
Q 018503           53 VSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEE---PQ-WRDCI-----QGSTAVVNL  123 (355)
Q Consensus        53 IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~---~~-~~~~~-----~~~d~vi~~  123 (355)
                      ||||||+||||++|+++|+++|++++++.|+.........      ...+|+.|.   +. +.+++     .++|+|||+
T Consensus         2 ilVtGa~GfiG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~------~~~~~~~d~~~~~~~~~~~~~~~~~~~~d~Vih~   75 (308)
T PRK11150          2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVN------LVDLDIADYMDKEDFLAQIMAGDDFGDIEAIFHE   75 (308)
T ss_pred             EEEecCCcHHHHHHHHHHHhCCCceEEEecCCCcchHHHh------hhhhhhhhhhhHHHHHHHHhcccccCCccEEEEC
Confidence            8999999999999999999999987777665433211100      122344443   33 33333     268999999


Q ss_pred             CCCCCCCCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCCCCccccCCCC--CCChh-HHHHHH
Q 018503          124 AGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSP--SGNDY-LAEVCR  200 (355)
Q Consensus       124 a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~--~~~~y-~~k~~~  200 (355)
                      |+......+   +....++.|+.++.+|+++|++  .++ +|||+||.++  ||+..+.+.+|..+  +...| .+|...
T Consensus        76 A~~~~~~~~---~~~~~~~~n~~~t~~ll~~~~~--~~~-~~i~~SS~~v--yg~~~~~~~~E~~~~~p~~~Y~~sK~~~  147 (308)
T PRK11150         76 GACSSTTEW---DGKYMMDNNYQYSKELLHYCLE--REI-PFLYASSAAT--YGGRTDDFIEEREYEKPLNVYGYSKFLF  147 (308)
T ss_pred             ceecCCcCC---ChHHHHHHHHHHHHHHHHHHHH--cCC-cEEEEcchHH--hCcCCCCCCccCCCCCCCCHHHHHHHHH
Confidence            986433222   2346789999999999999999  566 6999999998  99765555666554  34568 888887


Q ss_pred             HHHHHHhccCCCCeEEEEEecEEEeCCCCc---ccchHHHH--HHHhCCCC----CCCCcceecccHHHHHHHHHHHHhC
Q 018503          201 EWEGTALKVNKDVRLALIRIGIVLGKDGGA---LAKMIPLF--MMFAGGPL----GSGQQWFSWIHLDDIVNLIYEALSN  271 (355)
Q Consensus       201 ~~~~~~~~~~~~~~~~i~Rp~~i~G~~~~~---~~~~~~~~--~~~~~~~~----~~~~~~~~~i~v~Dva~~~~~~~~~  271 (355)
                      |.+...+....+++++++||+++||++...   ...+...+  +...+...    +.++..++|+|++|+|++++.+++.
T Consensus       148 E~~~~~~~~~~~~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~g~~~~~r~~i~v~D~a~a~~~~~~~  227 (308)
T PRK11150        148 DEYVRQILPEANSQICGFRYFNVYGPREGHKGSMASVAFHLNNQLNNGENPKLFEGSENFKRDFVYVGDVAAVNLWFWEN  227 (308)
T ss_pred             HHHHHHHHHHcCCCEEEEeeeeecCCCCCCCCccchhHHHHHHHHhcCCCCEEecCCCceeeeeeeHHHHHHHHHHHHhc
Confidence            877777766679999999999999997532   11222222  33444432    4556789999999999999999987


Q ss_pred             CCCCCceEecCCCccCHHHHHHHHHHHhCCCC--CCCCcHHHHHHHhcccceeeecCccccchhHHhCCCCCCccCHHHH
Q 018503          272 PSYRGVINGTAPNPVRLAEMCDHLGNVLGRPS--WLPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPFKYRYVKDA  349 (355)
Q Consensus       272 ~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~lG~~p~~~~~~~~  349 (355)
                      + .+++||+++++++|+.|+++.+.+.+|...  ..+.|....    +    ........+++|++++||+|++.+++++
T Consensus       228 ~-~~~~yni~~~~~~s~~el~~~i~~~~~~~~~~~~~~~~~~~----~----~~~~~~~~d~~k~~~~g~~p~~~~~~~g  298 (308)
T PRK11150        228 G-VSGIFNCGTGRAESFQAVADAVLAYHKKGEIEYIPFPDKLK----G----RYQAFTQADLTKLRAAGYDKPFKTVAEG  298 (308)
T ss_pred             C-CCCeEEcCCCCceeHHHHHHHHHHHhCCCcceeccCccccc----c----ccceecccCHHHHHhcCCCCCCCCHHHH
Confidence            5 367999999999999999999999998531  112121100    0    0112334688889889999986459999


Q ss_pred             HHHHhC
Q 018503          350 LKAIMS  355 (355)
Q Consensus       350 l~~~~~  355 (355)
                      |+++++
T Consensus       299 l~~~~~  304 (308)
T PRK11150        299 VAEYMA  304 (308)
T ss_pred             HHHHHH
Confidence            999863

>KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis]

Probab=100.00  E-value=4.9e-37  Score=251.26  Aligned_cols=285  Identities=19%  Similarity=0.253  Sum_probs=223.9

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCC-CCCccCCCeeecCCcchhhhcCCCcEEEECCCCCC
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-KKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTPI  128 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~~~  128 (355)
                      .++|+||||.||||+||++.|..+||+|++++.-.......... ..   +..+++.-.+-+..++.++|.|||+|+..+
T Consensus        27 ~lrI~itGgaGFIgSHLvdkLm~egh~VIa~Dn~ftg~k~n~~~~~~---~~~fel~~hdv~~pl~~evD~IyhLAapas  103 (350)
T KOG1429|consen   27 NLRILITGGAGFIGSHLVDKLMTEGHEVIALDNYFTGRKENLEHWIG---HPNFELIRHDVVEPLLKEVDQIYHLAAPAS  103 (350)
T ss_pred             CcEEEEecCcchHHHHHHHHHHhcCCeEEEEecccccchhhcchhcc---CcceeEEEeechhHHHHHhhhhhhhccCCC
Confidence            37999999999999999999999999999999876554443321 11   566888888888889999999999999765


Q ss_pred             CCCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCCCCccccCCCC-------CCChh-HHHHHH
Q 018503          129 GTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSP-------SGNDY-LAEVCR  200 (355)
Q Consensus       129 ~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~-------~~~~y-~~k~~~  200 (355)
                      +.. ....+...+..|+.++.+++-.|++  .+ +||++.||+.+  ||++...|..|+.+       +.+.| ..|...
T Consensus       104 p~~-y~~npvktIktN~igtln~lglakr--v~-aR~l~aSTseV--Ygdp~~hpq~e~ywg~vnpigpr~cydegKr~a  177 (350)
T KOG1429|consen  104 PPH-YKYNPVKTIKTNVIGTLNMLGLAKR--VG-ARFLLASTSEV--YGDPLVHPQVETYWGNVNPIGPRSCYDEGKRVA  177 (350)
T ss_pred             Ccc-cccCccceeeecchhhHHHHHHHHH--hC-ceEEEeecccc--cCCcccCCCccccccccCcCCchhhhhHHHHHH
Confidence            433 3344557778999999999999999  44 89999999999  99988888777765       24567 889999


Q ss_pred             HHHHHHhccCCCCeEEEEEecEEEeCCCCcc-cchHHHH--HHHhCCCC---CCCCcceecccHHHHHHHHHHHHhCCCC
Q 018503          201 EWEGTALKVNKDVRLALIRIGIVLGKDGGAL-AKMIPLF--MMFAGGPL---GSGQQWFSWIHLDDIVNLIYEALSNPSY  274 (355)
Q Consensus       201 ~~~~~~~~~~~~~~~~i~Rp~~i~G~~~~~~-~~~~~~~--~~~~~~~~---~~~~~~~~~i~v~Dva~~~~~~~~~~~~  274 (355)
                      |.+...+.++.|+.+.|.|+++.|||..... .+....+  +...+.++   ++|.+.|+|.++.|++++++++++.+. 
T Consensus       178 E~L~~~y~k~~giE~rIaRifNtyGPrm~~~dgrvvsnf~~q~lr~epltv~g~G~qtRSF~yvsD~Vegll~Lm~s~~-  256 (350)
T KOG1429|consen  178 ETLCYAYHKQEGIEVRIARIFNTYGPRMHMDDGRVVSNFIAQALRGEPLTVYGDGKQTRSFQYVSDLVEGLLRLMESDY-  256 (350)
T ss_pred             HHHHHHhhcccCcEEEEEeeecccCCccccCCChhhHHHHHHHhcCCCeEEEcCCcceEEEEeHHHHHHHHHHHhcCCC-
Confidence            9999999999999999999999999986332 2333333  55667775   899999999999999999999999875 


Q ss_pred             CCceEecCCCccCHHHHHHHHHHHhCCCCCCCCcHHHHHHHhcccceeeecCccccchhHHh-CCCCCCccCHHHHHHHH
Q 018503          275 RGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKE-LGFPFKYRYVKDALKAI  353 (355)
Q Consensus       275 ~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~-lG~~p~~~~~~~~l~~~  353 (355)
                      .+-+|+++++.+|+.|+++.+.+..+....+....   .. ..++     +..+-|++++++ |||+|+.+ ++|+|+.+
T Consensus       257 ~~pvNiGnp~e~Tm~elAemv~~~~~~~s~i~~~~---~~-~Ddp-----~kR~pDit~ake~LgW~Pkv~-L~egL~~t  326 (350)
T KOG1429|consen  257 RGPVNIGNPGEFTMLELAEMVKELIGPVSEIEFVE---NG-PDDP-----RKRKPDITKAKEQLGWEPKVS-LREGLPLT  326 (350)
T ss_pred             cCCcccCCccceeHHHHHHHHHHHcCCCcceeecC---CC-CCCc-----cccCccHHHHHHHhCCCCCCc-HHHhhHHH
Confidence            55699999999999999999999996431111100   00 0110     222334566765 99999997 99999987


Q ss_pred             h
Q 018503          354 M  354 (355)
Q Consensus       354 ~  354 (355)
                      +
T Consensus       327 ~  327 (350)
T KOG1429|consen  327 V  327 (350)
T ss_pred             H
Confidence            6

>TIGR01472 gmd GDP-mannose 4,6-dehydratase

Probab=100.00  E-value=7.9e-37  Score=275.80  Aligned_cols=298  Identities=17%  Similarity=0.137  Sum_probs=212.6

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchh-----hccCCC-----CCCccCCCeeecCCcchhhhcC--CCc
Q 018503           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKA-----ELIFPG-----KKTRFFPGVMIAEEPQWRDCIQ--GST  118 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-----~~~~~~-----~~~~~~~~~d~~~~~~~~~~~~--~~d  118 (355)
                      |+||||||+||||++|+++|++.|++|++++|+++..     ..+...     .....+...|+.|.+.+.++++  ++|
T Consensus         1 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d   80 (343)
T TIGR01472         1 KIALITGITGQDGSYLAEFLLEKGYEVHGLIRRSSSFNTQRIEHIYEDPHNVNKARMKLHYGDLTDSSNLRRIIDEIKPT   80 (343)
T ss_pred             CeEEEEcCCCcHHHHHHHHHHHCCCEEEEEecCCcccchhhhhhhhhccccccccceeEEEeccCCHHHHHHHHHhCCCC
Confidence            5899999999999999999999999999999986421     111000     0001134579999999999887  469


Q ss_pred             EEEECCCCCCCCCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCC---CcEEEEeeeeeeeeCCCCCccccCCCC--CCCh
Q 018503          119 AVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGV---RPSVLVSATALGYYGTSETEVFDESSP--SGND  193 (355)
Q Consensus       119 ~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~---~~~v~~Ss~~~~~yg~~~~~~~~e~~~--~~~~  193 (355)
                      +|||+|+.... ......+...+++|+.++.+++++|.+  .++   ++|||+||.++  ||.....+.+|+.+  +.+.
T Consensus        81 ~ViH~Aa~~~~-~~~~~~~~~~~~~n~~gt~~ll~a~~~--~~~~~~~~~v~~SS~~v--yg~~~~~~~~E~~~~~p~~~  155 (343)
T TIGR01472        81 EIYNLAAQSHV-KVSFEIPEYTADVDGIGTLRLLEAVRT--LGLIKSVKFYQASTSEL--YGKVQEIPQNETTPFYPRSP  155 (343)
T ss_pred             EEEECCccccc-chhhhChHHHHHHHHHHHHHHHHHHHH--hCCCcCeeEEEeccHHh--hCCCCCCCCCCCCCCCCCCh
Confidence            99999997532 122334556778899999999999988  454   38999999999  99765556777765  3456


Q ss_pred             h-HHHHHHHHHHHHhccCCCCeEEEEEecEEEeCCCCc--ccchHHH-H-HHHhCCC----CCCCCcceecccHHHHHHH
Q 018503          194 Y-LAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGA--LAKMIPL-F-MMFAGGP----LGSGQQWFSWIHLDDIVNL  264 (355)
Q Consensus       194 y-~~k~~~~~~~~~~~~~~~~~~~i~Rp~~i~G~~~~~--~~~~~~~-~-~~~~~~~----~~~~~~~~~~i~v~Dva~~  264 (355)
                      | .+|...|.+...+..+.++++++.|+.++|||+.+.  ....+.. + ....+++    ++++++.++|+|++|+|++
T Consensus       156 Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~V~D~a~a  235 (343)
T TIGR01472       156 YAAAKLYAHWITVNYREAYGLFAVNGILFNHESPRRGENFVTRKITRAAAKIKLGLQEKLYLGNLDAKRDWGHAKDYVEA  235 (343)
T ss_pred             hHHHHHHHHHHHHHHHHHhCCceEEEeecccCCCCCCccccchHHHHHHHHHHcCCCCceeeCCCccccCceeHHHHHHH
Confidence            8 888888888888777778999999999999986432  2222222 2 2333432    2778899999999999999


Q ss_pred             HHHHHhCCCCCCceEecCCCccCHHHHHHHHHHHhCCCCCCC--------CcHHHHHH--Hhccc--ceeeecCccccch
Q 018503          265 IYEALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLP--------VPEFALKA--VLGEG--AFVVLEGQRVVPA  332 (355)
Q Consensus       265 ~~~~~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~--------~~~~~~~~--~~~~~--~~~~~~~~~~~~~  332 (355)
                      ++.+++++. .+.||+++++++|+.|+++.+++.+|++..+.        .|......  .+...  ...-......+.+
T Consensus       236 ~~~~~~~~~-~~~yni~~g~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~  314 (343)
T TIGR01472       236 MWLMLQQDK-PDDYVIATGETHSVREFVEVSFEYIGKTLNWKDKGINEVGRCKETGKVHVEIDPRYFRPTEVDLLLGDAT  314 (343)
T ss_pred             HHHHHhcCC-CccEEecCCCceeHHHHHHHHHHHcCCCcccccccccccccccccCceeEEeCccccCCCccchhcCCHH
Confidence            999998764 57999999999999999999999999652110        00000000  00000  0000111234677


Q ss_pred             hHH-hCCCCCCccCHHHHHHHHhC
Q 018503          333 RAK-ELGFPFKYRYVKDALKAIMS  355 (355)
Q Consensus       333 k~~-~lG~~p~~~~~~~~l~~~~~  355 (355)
                      |++ ++||+|+++ ++|+|+++++
T Consensus       315 k~~~~lgw~p~~~-l~egi~~~~~  337 (343)
T TIGR01472       315 KAKEKLGWKPEVS-FEKLVKEMVE  337 (343)
T ss_pred             HHHHhhCCCCCCC-HHHHHHHHHH
Confidence            885 589999996 9999999873

Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).

>PLN02989 cinnamyl-alcohol dehydrogenase family protein

Probab=100.00  E-value=4.3e-36  Score=269.27  Aligned_cols=291  Identities=16%  Similarity=0.159  Sum_probs=209.5

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhcc---CC-CC--CCccCCCeeecCCcchhhhcCCCcEEEEC
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELI---FP-GK--KTRFFPGVMIAEEPQWRDCIQGSTAVVNL  123 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~---~~-~~--~~~~~~~~d~~~~~~~~~~~~~~d~vi~~  123 (355)
                      +|+||||||+||||++++++|++.|++|++++|+.......   .. ..  ....+...|+.|.+.+.++++++|+|||+
T Consensus         5 ~k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vih~   84 (325)
T PLN02989          5 GKVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKDRKKTDHLLALDGAKERLKLFKADLLDEGSFELAIDGCETVFHT   84 (325)
T ss_pred             CCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCCcchhhHHHHHhccCCCCceEEEeCCCCCchHHHHHHcCCCEEEEe
Confidence            47999999999999999999999999999998886542211   00 00  00013346888999999999999999999


Q ss_pred             CCCCCCCCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCC-----CCccccCCCCCC-------
Q 018503          124 AGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTS-----ETEVFDESSPSG-------  191 (355)
Q Consensus       124 a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~-----~~~~~~e~~~~~-------  191 (355)
                      |+... .......+...+++|+.++.++++++... .+.++||++||.++  |+..     ...+++|+.+..       
T Consensus        85 A~~~~-~~~~~~~~~~~~~~n~~g~~~ll~a~~~~-~~~~~iv~~SS~~~--~~~~~~~~~~~~~~~E~~~~~p~~~~~~  160 (325)
T PLN02989         85 ASPVA-ITVKTDPQVELINPAVNGTINVLRTCTKV-SSVKRVILTSSMAA--VLAPETKLGPNDVVDETFFTNPSFAEER  160 (325)
T ss_pred             CCCCC-CCCCCChHHHHHHHHHHHHHHHHHHHHHc-CCceEEEEecchhh--eecCCccCCCCCccCcCCCCchhHhccc
Confidence            99642 22234456788899999999999999772 24679999999876  5432     234567776543       


Q ss_pred             -Chh-HHHHHHHHHHHHhccCCCCeEEEEEecEEEeCCCCcccchH-HHH-HHHhCCCCCCCCcceecccHHHHHHHHHH
Q 018503          192 -NDY-LAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMI-PLF-MMFAGGPLGSGQQWFSWIHLDDIVNLIYE  267 (355)
Q Consensus       192 -~~y-~~k~~~~~~~~~~~~~~~~~~~i~Rp~~i~G~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~i~v~Dva~~~~~  267 (355)
                       ..| .+|...|.....+...++++++++||+++|||+......+. ..+ ....++... +.+.++|+|++|+|++++.
T Consensus       161 ~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~~~~~~~~~~i~~~~~~~~~~-~~~~r~~i~v~Dva~a~~~  239 (325)
T PLN02989        161 KQWYVLSKTLAEDAAWRFAKDNEIDLIVLNPGLVTGPILQPTLNFSVAVIVELMKGKNPF-NTTHHRFVDVRDVALAHVK  239 (325)
T ss_pred             ccchHHHHHHHHHHHHHHHHHcCCeEEEEcCCceeCCCCCCCCCchHHHHHHHHcCCCCC-CCcCcCeeEHHHHHHHHHH
Confidence             358 88888888887777777999999999999999764322222 122 333444331 2345799999999999999


Q ss_pred             HHhCCCCCCceEecCCCccCHHHHHHHHHHHhCCCCCCCCcHHHHHHHhcccceeeecCccccchhHHhCCCCCCccCHH
Q 018503          268 ALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPFKYRYVK  347 (355)
Q Consensus       268 ~~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~lG~~p~~~~~~  347 (355)
                      +++.+...+.||++ +..+|+.|+++.+.+.++... +..+.       .+....-......+++|+++|||.|+++ ++
T Consensus       240 ~l~~~~~~~~~ni~-~~~~s~~ei~~~i~~~~~~~~-~~~~~-------~~~~~~~~~~~~~~~~k~~~lg~~p~~~-l~  309 (325)
T PLN02989        240 ALETPSANGRYIID-GPVVTIKDIENVLREFFPDLC-IADRN-------EDITELNSVTFNVCLDKVKSLGIIEFTP-TE  309 (325)
T ss_pred             HhcCcccCceEEEe-cCCCCHHHHHHHHHHHCCCCC-CCCCC-------CCcccccccCcCCCHHHHHHcCCCCCCC-HH
Confidence            99876656799995 557999999999999997421 11110       1100001123356678888899999997 99


Q ss_pred             HHHHHHhC
Q 018503          348 DALKAIMS  355 (355)
Q Consensus       348 ~~l~~~~~  355 (355)
                      ++|+++++
T Consensus       310 ~gi~~~~~  317 (325)
T PLN02989        310 TSLRDTVL  317 (325)
T ss_pred             HHHHHHHH
Confidence            99999874

>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated

Probab=100.00  E-value=1.3e-36  Score=294.85  Aligned_cols=298  Identities=18%  Similarity=0.263  Sum_probs=216.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhC-CCeEEEEecCCchhhccCCCCCCccCCCeeecCCcc-hhhhcCCCcEEEECCCC
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQAD-NHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQ-WRDCIQGSTAVVNLAGT  126 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~-~~~~~~~~d~vi~~a~~  126 (355)
                      .+|+|||||||||||++|+++|+++ ||+|++++|............. ..+...|+.|.+. +.++++++|+|||+|+.
T Consensus       314 ~~~~VLVTGatGFIGs~Lv~~Ll~~~g~~V~~l~r~~~~~~~~~~~~~-~~~~~gDl~d~~~~l~~~l~~~D~ViHlAa~  392 (660)
T PRK08125        314 RRTRVLILGVNGFIGNHLTERLLRDDNYEVYGLDIGSDAISRFLGHPR-FHFVEGDISIHSEWIEYHIKKCDVVLPLVAI  392 (660)
T ss_pred             cCCEEEEECCCchHHHHHHHHHHhCCCcEEEEEeCCchhhhhhcCCCc-eEEEeccccCcHHHHHHHhcCCCEEEECccc
Confidence            3579999999999999999999986 7999999997754332221100 0133467777655 56778899999999997


Q ss_pred             CCCCCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCCCCccccCCCCC---------CChh-HH
Q 018503          127 PIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPS---------GNDY-LA  196 (355)
Q Consensus       127 ~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~---------~~~y-~~  196 (355)
                      ..... ...++...+++|+.++.+++++|++  .+ ++|||+||+++  ||...+.+++|+++.         ...| .+
T Consensus       393 ~~~~~-~~~~~~~~~~~Nv~~t~~ll~a~~~--~~-~~~V~~SS~~v--yg~~~~~~~~E~~~~~~~~p~~~p~s~Yg~s  466 (660)
T PRK08125        393 ATPIE-YTRNPLRVFELDFEENLKIIRYCVK--YN-KRIIFPSTSEV--YGMCTDKYFDEDTSNLIVGPINKQRWIYSVS  466 (660)
T ss_pred             cCchh-hccCHHHHHHhhHHHHHHHHHHHHh--cC-CeEEEEcchhh--cCCCCCCCcCccccccccCCCCCCccchHHH
Confidence            54322 2334567889999999999999999  56 79999999998  996555567776532         2358 88


Q ss_pred             HHHHHHHHHHhccCCCCeEEEEEecEEEeCCCCcc-------cchHHHH--HHHhCCCC---CCCCcceecccHHHHHHH
Q 018503          197 EVCREWEGTALKVNKDVRLALIRIGIVLGKDGGAL-------AKMIPLF--MMFAGGPL---GSGQQWFSWIHLDDIVNL  264 (355)
Q Consensus       197 k~~~~~~~~~~~~~~~~~~~i~Rp~~i~G~~~~~~-------~~~~~~~--~~~~~~~~---~~~~~~~~~i~v~Dva~~  264 (355)
                      |...|.....+...++++++++||+++|||+....       ..+++.+  +...+.++   +++++.++|+|++|+|++
T Consensus       467 K~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~i~~~i~~~~~~~~i~~~g~g~~~rd~i~v~Dva~a  546 (660)
T PRK08125        467 KQLLDRVIWAYGEKEGLRFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLVDGGKQKRCFTDIRDGIEA  546 (660)
T ss_pred             HHHHHHHHHHHHHhcCCceEEEEEceeeCCCccccccccccccchHHHHHHHhcCCCCeEEeCCCceeeceeeHHHHHHH
Confidence            98888888888777799999999999999975321       1233332  44445554   678899999999999999


Q ss_pred             HHHHHhCCC---CCCceEecCCC-ccCHHHHHHHHHHHhCCC-CCCCCcHHH-HHHH-----hcccceeeecCccccchh
Q 018503          265 IYEALSNPS---YRGVINGTAPN-PVRLAEMCDHLGNVLGRP-SWLPVPEFA-LKAV-----LGEGAFVVLEGQRVVPAR  333 (355)
Q Consensus       265 ~~~~~~~~~---~~~~~~i~~~~-~~s~~el~~~i~~~~g~~-~~~~~~~~~-~~~~-----~~~~~~~~~~~~~~~~~k  333 (355)
                      ++.+++++.   .+++||+++++ .+|++|+++.+.+.+|.+ ..+.+|... ....     .+.. .........+++|
T Consensus       547 ~~~~l~~~~~~~~g~iyni~~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~d~~k  625 (660)
T PRK08125        547 LFRIIENKDNRCDGQIINIGNPDNEASIRELAEMLLASFEKHPLRDHFPPFAGFRVVESSSYYGKG-YQDVEHRKPSIRN  625 (660)
T ss_pred             HHHHHhccccccCCeEEEcCCCCCceeHHHHHHHHHHHhccCcccccCCccccccccccccccccc-cccccccCCChHH
Confidence            999998753   35589999985 799999999999999964 223333221 0000     0000 0011233467788


Q ss_pred             HH-hCCCCCCccCHHHHHHHHhC
Q 018503          334 AK-ELGFPFKYRYVKDALKAIMS  355 (355)
Q Consensus       334 ~~-~lG~~p~~~~~~~~l~~~~~  355 (355)
                      ++ +|||+|+++ ++++|+++++
T Consensus       626 a~~~LGw~P~~~-lee~l~~~i~  647 (660)
T PRK08125        626 ARRLLDWEPKID-MQETIDETLD  647 (660)
T ss_pred             HHHHhCCCCCCc-HHHHHHHHHH
Confidence            86 599999996 9999999863

>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase

Probab=100.00  E-value=1.1e-36  Score=271.03  Aligned_cols=271  Identities=17%  Similarity=0.247  Sum_probs=205.4

Q ss_pred             EEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcC--CCcEEEECCCCCCCCC
Q 018503           54 SVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ--GSTAVVNLAGTPIGTR  131 (355)
Q Consensus        54 lVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--~~d~vi~~a~~~~~~~  131 (355)
                      ||||||||||++|++.|++.|++|+++.+.                ..+|+.+.+++.++++  ++|+|||+|+......
T Consensus         1 lItGa~GfiG~~l~~~L~~~g~~v~~~~~~----------------~~~Dl~~~~~l~~~~~~~~~d~Vih~A~~~~~~~   64 (306)
T PLN02725          1 FVAGHRGLVGSAIVRKLEALGFTNLVLRTH----------------KELDLTRQADVEAFFAKEKPTYVILAAAKVGGIH   64 (306)
T ss_pred             CcccCCCcccHHHHHHHHhCCCcEEEeecc----------------ccCCCCCHHHHHHHHhccCCCEEEEeeeeecccc
Confidence            699999999999999999999988766432                2368899999988876  5799999998743222


Q ss_pred             CChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCCCCccccCCC----CCC---Chh-HHHHHHHHH
Q 018503          132 WSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESS----PSG---NDY-LAEVCREWE  203 (355)
Q Consensus       132 ~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~----~~~---~~y-~~k~~~~~~  203 (355)
                      .....+..+++.|+.++.+++++|++  .+++++||+||+.+  ||.....+++|++    +..   ..| .+|...+..
T Consensus        65 ~~~~~~~~~~~~n~~~~~~ll~~~~~--~~~~~~i~~SS~~v--yg~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~e~~  140 (306)
T PLN02725         65 ANMTYPADFIRENLQIQTNVIDAAYR--HGVKKLLFLGSSCI--YPKFAPQPIPETALLTGPPEPTNEWYAIAKIAGIKM  140 (306)
T ss_pred             hhhhCcHHHHHHHhHHHHHHHHHHHH--cCCCeEEEeCceee--cCCCCCCCCCHHHhccCCCCCCcchHHHHHHHHHHH
Confidence            33345667889999999999999999  68899999999998  9976666777765    222   237 788888877


Q ss_pred             HHHhccCCCCeEEEEEecEEEeCCCCcc---c----chHHHH--HHHhCCC----CCCCCcceecccHHHHHHHHHHHHh
Q 018503          204 GTALKVNKDVRLALIRIGIVLGKDGGAL---A----KMIPLF--MMFAGGP----LGSGQQWFSWIHLDDIVNLIYEALS  270 (355)
Q Consensus       204 ~~~~~~~~~~~~~i~Rp~~i~G~~~~~~---~----~~~~~~--~~~~~~~----~~~~~~~~~~i~v~Dva~~~~~~~~  270 (355)
                      ...+....+++++++||+.+||++....   .    .++..+  ....+.+    .+.+++.++++|++|+|++++.+++
T Consensus       141 ~~~~~~~~~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dv~~~~~~~~~  220 (306)
T PLN02725        141 CQAYRIQYGWDAISGMPTNLYGPHDNFHPENSHVIPALIRRFHEAKANGAPEVVVWGSGSPLREFLHVDDLADAVVFLMR  220 (306)
T ss_pred             HHHHHHHhCCCEEEEEecceeCCCCCCCCCCCcccHHHHHHHHHHhhcCCCeEEEcCCCCeeeccccHHHHHHHHHHHHh
Confidence            7666666799999999999999975311   1    122221  1123433    2567888999999999999999998


Q ss_pred             CCCCCCceEecCCCccCHHHHHHHHHHHhCCCCCCCCcHHHHHHHhcccceeeecCccccchhHHhCCCCCCccCHHHHH
Q 018503          271 NPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPFKYRYVKDAL  350 (355)
Q Consensus       271 ~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~lG~~p~~~~~~~~l  350 (355)
                      .....+.||+++++++|+.|+++.+++.++.+..+....       ....  ......++++|++++||+|+++ ++++|
T Consensus       221 ~~~~~~~~ni~~~~~~s~~e~~~~i~~~~~~~~~~~~~~-------~~~~--~~~~~~~d~~k~~~lg~~p~~~-~~~~l  290 (306)
T PLN02725        221 RYSGAEHVNVGSGDEVTIKELAELVKEVVGFEGELVWDT-------SKPD--GTPRKLMDSSKLRSLGWDPKFS-LKDGL  290 (306)
T ss_pred             ccccCcceEeCCCCcccHHHHHHHHHHHhCCCCceeecC-------CCCC--cccccccCHHHHHHhCCCCCCC-HHHHH
Confidence            765567899999999999999999999998653221110       0000  0123456788888899999996 99999


Q ss_pred             HHHh
Q 018503          351 KAIM  354 (355)
Q Consensus       351 ~~~~  354 (355)
                      ++++
T Consensus       291 ~~~~  294 (306)
T PLN02725        291 QETY  294 (306)
T ss_pred             HHHH
Confidence            9876

>PLN00198 anthocyanidin reductase; Provisional

Probab=100.00  E-value=7.1e-36  Score=269.13  Aligned_cols=289  Identities=17%  Similarity=0.225  Sum_probs=204.4

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhcc-----CCCCCCccCCCeeecCCcchhhhcCCCcEEEECC
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELI-----FPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLA  124 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-----~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a  124 (355)
                      +|+||||||+||||++|+++|+++|++|++++|+.+.....     ...........+|+.|.+.+.++++++|+|||+|
T Consensus         9 ~~~vlItG~~GfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih~A   88 (338)
T PLN00198          9 KKTACVIGGTGFLASLLIKLLLQKGYAVNTTVRDPENQKKIAHLRALQELGDLKIFGADLTDEESFEAPIAGCDLVFHVA   88 (338)
T ss_pred             CCeEEEECCchHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHhcCCCCceEEEEcCCCChHHHHHHHhcCCEEEEeC
Confidence            57899999999999999999999999999999886542210     0100000134568889999999999999999999


Q ss_pred             CCCCCCCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCCC----CccccCC-----------CC
Q 018503          125 GTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSE----TEVFDES-----------SP  189 (355)
Q Consensus       125 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~----~~~~~e~-----------~~  189 (355)
                      +...  .+.......++++|+.++.++++++.+. .++++|||+||.++  ||...    +.+.+|.           .+
T Consensus        89 ~~~~--~~~~~~~~~~~~~nv~g~~~ll~a~~~~-~~~~~~v~~SS~~~--~g~~~~~~~~~~~~E~~~~~~~~~~~~~~  163 (338)
T PLN00198         89 TPVN--FASEDPENDMIKPAIQGVHNVLKACAKA-KSVKRVILTSSAAA--VSINKLSGTGLVMNEKNWTDVEFLTSEKP  163 (338)
T ss_pred             CCCc--cCCCChHHHHHHHHHHHHHHHHHHHHhc-CCccEEEEeeccee--eeccCCCCCCceeccccCCchhhhhhcCC
Confidence            8531  1122223457789999999999999772 25789999999988  77421    2233443           23


Q ss_pred             CCChh-HHHHHHHHHHHHhccCCCCeEEEEEecEEEeCCCCc-ccchHHHH-HHHhCCCC---C-CC----CcceecccH
Q 018503          190 SGNDY-LAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGA-LAKMIPLF-MMFAGGPL---G-SG----QQWFSWIHL  258 (355)
Q Consensus       190 ~~~~y-~~k~~~~~~~~~~~~~~~~~~~i~Rp~~i~G~~~~~-~~~~~~~~-~~~~~~~~---~-~~----~~~~~~i~v  258 (355)
                      +...| .+|...|.+...+...++++++++||+++|||+... ...++..+ ....+.++   + .+    +..++|+|+
T Consensus       164 p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~R~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~V  243 (338)
T PLN00198        164 PTWGYPASKTLAEKAAWKFAEENNIDLITVIPTLMAGPSLTSDIPSSLSLAMSLITGNEFLINGLKGMQMLSGSISITHV  243 (338)
T ss_pred             ccchhHHHHHHHHHHHHHHHHhcCceEEEEeCCceECCCccCCCCCcHHHHHHHHcCCccccccccccccccCCcceeEH
Confidence            45568 889988888888877789999999999999997532 22222221 33344332   2 12    224799999


Q ss_pred             HHHHHHHHHHHhCCCCCCceEecCCCccCHHHHHHHHHHHhCCCCCCCCcHHHHHHHhcccceeeecCccccchhHHhCC
Q 018503          259 DDIVNLIYEALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKELG  338 (355)
Q Consensus       259 ~Dva~~~~~~~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~lG  338 (355)
                      +|+|++++.+++.+...+.| +++++.+|+.|+++.+.+.++... ++...       ++..  ......++++|++++|
T Consensus       244 ~D~a~a~~~~~~~~~~~~~~-~~~~~~~s~~el~~~i~~~~~~~~-~~~~~-------~~~~--~~~~~~~~~~k~~~~G  312 (338)
T PLN00198        244 EDVCRAHIFLAEKESASGRY-ICCAANTSVPELAKFLIKRYPQYQ-VPTDF-------GDFP--SKAKLIISSEKLISEG  312 (338)
T ss_pred             HHHHHHHHHHhhCcCcCCcE-EEecCCCCHHHHHHHHHHHCCCCC-CCccc-------cccC--CCCccccChHHHHhCC
Confidence            99999999999886555678 455677999999999999886321 11110       0000  0123346778888899


Q ss_pred             CCCCccCHHHHHHHHhC
Q 018503          339 FPFKYRYVKDALKAIMS  355 (355)
Q Consensus       339 ~~p~~~~~~~~l~~~~~  355 (355)
                      |+|+++ ++|+|+++++
T Consensus       313 ~~p~~~-l~~gi~~~~~  328 (338)
T PLN00198        313 FSFEYG-IEEIYDQTVE  328 (338)
T ss_pred             ceecCc-HHHHHHHHHH
Confidence            999997 9999999873

>PLN02662 cinnamyl-alcohol dehydrogenase family protein

Probab=100.00  E-value=4.2e-36  Score=269.14  Aligned_cols=288  Identities=20%  Similarity=0.233  Sum_probs=206.2

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhc---cCC--C-CCCccCCCeeecCCcchhhhcCCCcEEEEC
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAEL---IFP--G-KKTRFFPGVMIAEEPQWRDCIQGSTAVVNL  123 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~---~~~--~-~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~  123 (355)
                      .|+|||||||||||++|+++|+++||+|++++|+......   +..  . .....+...|+.|++.+.++++++|+|||+
T Consensus         4 ~~~ilVtGatGfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih~   83 (322)
T PLN02662          4 GKVVCVTGASGYIASWLVKLLLQRGYTVKATVRDPNDPKKTEHLLALDGAKERLHLFKANLLEEGSFDSVVDGCEGVFHT   83 (322)
T ss_pred             CCEEEEECChHHHHHHHHHHHHHCCCEEEEEEcCCCchhhHHHHHhccCCCCceEEEeccccCcchHHHHHcCCCEEEEe
Confidence            4789999999999999999999999999999997653211   100  0 000013446888999999999999999999


Q ss_pred             CCCCCCCCCChhhH-HHHHHHhhhhHHHHHHHHHcCCC-CCCcEEEEeeeeeeeeCCC---CCccccCCCCCC-------
Q 018503          124 AGTPIGTRWSSEIK-KEIKESRIRVTSKVVDLINESPE-GVRPSVLVSATALGYYGTS---ETEVFDESSPSG-------  191 (355)
Q Consensus       124 a~~~~~~~~~~~~~-~~~~~~n~~~~~~l~~a~~~~~~-~~~~~v~~Ss~~~~~yg~~---~~~~~~e~~~~~-------  191 (355)
                      |+....   ....+ ...+++|+.++.++++++.+  . ++++|||+||.++..|+..   .+.+++|+.+..       
T Consensus        84 A~~~~~---~~~~~~~~~~~~nv~gt~~ll~a~~~--~~~~~~~v~~SS~~~~~y~~~~~~~~~~~~E~~~~~p~~~~~~  158 (322)
T PLN02662         84 ASPFYH---DVTDPQAELIDPAVKGTLNVLRSCAK--VPSVKRVVVTSSMAAVAYNGKPLTPDVVVDETWFSDPAFCEES  158 (322)
T ss_pred             CCcccC---CCCChHHHHHHHHHHHHHHHHHHHHh--CCCCCEEEEccCHHHhcCCCcCCCCCCcCCcccCCChhHhhcc
Confidence            986421   11223 37889999999999999987  5 7889999999764226532   233566665432       


Q ss_pred             -Chh-HHHHHHHHHHHHhccCCCCeEEEEEecEEEeCCCCcccchH-HH-HHHHhCCCCCCCCcceecccHHHHHHHHHH
Q 018503          192 -NDY-LAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMI-PL-FMMFAGGPLGSGQQWFSWIHLDDIVNLIYE  267 (355)
Q Consensus       192 -~~y-~~k~~~~~~~~~~~~~~~~~~~i~Rp~~i~G~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~  267 (355)
                       ..| .+|...|.....+....+++++++||+++|||......... .. .+...+.+. .+++.++|+|++|+|++++.
T Consensus       159 ~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~v~Dva~a~~~  237 (322)
T PLN02662        159 KLWYVLSKTLAEEAAWKFAKENGIDMVTINPAMVIGPLLQPTLNTSAEAILNLINGAQT-FPNASYRWVDVRDVANAHIQ  237 (322)
T ss_pred             cchHHHHHHHHHHHHHHHHHHcCCcEEEEeCCcccCCCCCCCCCchHHHHHHHhcCCcc-CCCCCcCeEEHHHHHHHHHH
Confidence             357 77887887777776667999999999999999753321111 11 233334332 24567899999999999999


Q ss_pred             HHhCCCCCCceEecCCCccCHHHHHHHHHHHhCCCCCCCCcHHHHHHHhcccceeeecCccccchhHHhCCCCCCccCHH
Q 018503          268 ALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPFKYRYVK  347 (355)
Q Consensus       268 ~~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~lG~~p~~~~~~  347 (355)
                      +++.+...+.||++ ++++|+.|+++.+.+.++..   ++|....    .  .........++++|++++||+|+  +++
T Consensus       238 ~~~~~~~~~~~~~~-g~~~s~~e~~~~i~~~~~~~---~~~~~~~----~--~~~~~~~~~~d~~k~~~lg~~~~--~~~  305 (322)
T PLN02662        238 AFEIPSASGRYCLV-ERVVHYSEVVKILHELYPTL---QLPEKCA----D--DKPYVPTYQVSKEKAKSLGIEFI--PLE  305 (322)
T ss_pred             HhcCcCcCCcEEEe-CCCCCHHHHHHHHHHHCCCC---CCCCCCC----C--ccccccccccChHHHHHhCCccc--cHH
Confidence            99986656789997 57799999999999998742   2221110    0  00112345688899988999974  599


Q ss_pred             HHHHHHhC
Q 018503          348 DALKAIMS  355 (355)
Q Consensus       348 ~~l~~~~~  355 (355)
                      ++|+++++
T Consensus       306 ~~l~~~~~  313 (322)
T PLN02662        306 VSLKDTVE  313 (322)
T ss_pred             HHHHHHHH
Confidence            99999873

>PLN02986 cinnamyl-alcohol dehydrogenase family protein

Probab=100.00  E-value=3.7e-36  Score=269.28  Aligned_cols=290  Identities=20%  Similarity=0.258  Sum_probs=206.5

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhc---cCCC-C--CCccCCCeeecCCcchhhhcCCCcEEEEC
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAEL---IFPG-K--KTRFFPGVMIAEEPQWRDCIQGSTAVVNL  123 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~---~~~~-~--~~~~~~~~d~~~~~~~~~~~~~~d~vi~~  123 (355)
                      .++||||||+||||++++++|+++||+|+++.|+......   .... .  ....+...|+.|.+.+.++++++|+|||+
T Consensus         5 ~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih~   84 (322)
T PLN02986          5 GKLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLTDRKKTEHLLALDGAKERLKLFKADLLEESSFEQAIEGCDAVFHT   84 (322)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCCcchHHHHHHHhccCCCCceEEEecCCCCcchHHHHHhCCCEEEEe
Confidence            4799999999999999999999999999999998754221   1100 0  00113346888999999999999999999


Q ss_pred             CCCCCCCCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCC---CCccccCCCCC--------CC
Q 018503          124 AGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTS---ETEVFDESSPS--------GN  192 (355)
Q Consensus       124 a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~---~~~~~~e~~~~--------~~  192 (355)
                      |+.....  ..+.....++.|+.++.++++++++. .++++|||+||.++..|+..   .+.+++|+.+.        ..
T Consensus        85 A~~~~~~--~~~~~~~~~~~nv~gt~~ll~~~~~~-~~v~rvV~~SS~~~~~~~~~~~~~~~~~~E~~~~~p~~~~~~~~  161 (322)
T PLN02986         85 ASPVFFT--VKDPQTELIDPALKGTINVLNTCKET-PSVKRVILTSSTAAVLFRQPPIEANDVVDETFFSDPSLCRETKN  161 (322)
T ss_pred             CCCcCCC--CCCchhhhhHHHHHHHHHHHHHHHhc-CCccEEEEecchhheecCCccCCCCCCcCcccCCChHHhhcccc
Confidence            9863211  11223457889999999999999872 26889999999876334532   23346666542        34


Q ss_pred             hh-HHHHHHHHHHHHhccCCCCeEEEEEecEEEeCCCCcccch-HHHH-HHHhCCCCCCCCcceecccHHHHHHHHHHHH
Q 018503          193 DY-LAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKM-IPLF-MMFAGGPLGSGQQWFSWIHLDDIVNLIYEAL  269 (355)
Q Consensus       193 ~y-~~k~~~~~~~~~~~~~~~~~~~i~Rp~~i~G~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~  269 (355)
                      .| .+|...|.....+..+++++++++||+++|||.......+ ...+ ....+.++ .+.+.++|+|++|+|++++.++
T Consensus       162 ~Y~~sK~~aE~~~~~~~~~~~~~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~v~v~Dva~a~~~al  240 (322)
T PLN02986        162 WYPLSKILAENAAWEFAKDNGIDMVVLNPGFICGPLLQPTLNFSVELIVDFINGKNL-FNNRFYRFVDVRDVALAHIKAL  240 (322)
T ss_pred             chHHHHHHHHHHHHHHHHHhCCeEEEEcccceeCCCCCCCCCccHHHHHHHHcCCCC-CCCcCcceeEHHHHHHHHHHHh
Confidence            58 8898888888777777799999999999999975322111 1111 33344443 2356689999999999999999


Q ss_pred             hCCCCCCceEecCCCccCHHHHHHHHHHHhCCCCCCCCcHHHHHHHhcccceeeecCccccchhHHhCCCCCCccCHHHH
Q 018503          270 SNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPFKYRYVKDA  349 (355)
Q Consensus       270 ~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~lG~~p~~~~~~~~  349 (355)
                      +.+...+.||++ ++++|+.|+++.+.+.++.-   .++... .  .++.   ......++++|+++|||+|+  +++|+
T Consensus       241 ~~~~~~~~yni~-~~~~s~~e~~~~i~~~~~~~---~~~~~~-~--~~~~---~~~~~~~d~~~~~~lg~~~~--~l~e~  308 (322)
T PLN02986        241 ETPSANGRYIID-GPIMSVNDIIDILRELFPDL---CIADTN-E--ESEM---NEMICKVCVEKVKNLGVEFT--PMKSS  308 (322)
T ss_pred             cCcccCCcEEEe-cCCCCHHHHHHHHHHHCCCC---CCCCCC-c--cccc---cccCCccCHHHHHHcCCccc--CHHHH
Confidence            987666799995 56799999999999998731   122110 0  0110   11112467788889999997  59999


Q ss_pred             HHHHhC
Q 018503          350 LKAIMS  355 (355)
Q Consensus       350 l~~~~~  355 (355)
                      |+++++
T Consensus       309 ~~~~~~  314 (322)
T PLN02986        309 LRDTIL  314 (322)
T ss_pred             HHHHHH
Confidence            999873

>PLN02650 dihydroflavonol-4-reductase

Probab=100.00  E-value=4.9e-36  Score=271.50  Aligned_cols=289  Identities=20%  Similarity=0.252  Sum_probs=203.3

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhcc---CCC-C--CCccCCCeeecCCcchhhhcCCCcEEEEC
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELI---FPG-K--KTRFFPGVMIAEEPQWRDCIQGSTAVVNL  123 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~---~~~-~--~~~~~~~~d~~~~~~~~~~~~~~d~vi~~  123 (355)
                      .++||||||+||||++|+++|+++|++|++++|+.......   ... .  ....+...|+.|.+.+.++++++|+|||+
T Consensus         5 ~k~iLVTGatGfIGs~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~d~ViH~   84 (351)
T PLN02650          5 KETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPANVKKVKHLLDLPGATTRLTLWKADLAVEGSFDDAIRGCTGVFHV   84 (351)
T ss_pred             CCEEEEeCCcHHHHHHHHHHHHHCCCEEEEEEcCcchhHHHHHHHhccCCCCceEEEEecCCChhhHHHHHhCCCEEEEe
Confidence            47899999999999999999999999999999976543211   000 0  00013356888999999999999999999


Q ss_pred             CCCCCCCCCChhhHHHHHHHhhhhHHHHHHHHHcCCCC-CCcEEEEeeeeeeeeCCC-CCcc-ccCCCC-----------
Q 018503          124 AGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEG-VRPSVLVSATALGYYGTS-ETEV-FDESSP-----------  189 (355)
Q Consensus       124 a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~-~~~~v~~Ss~~~~~yg~~-~~~~-~~e~~~-----------  189 (355)
                      |+....  .........+++|+.++.+++++|.+  .+ +++|||+||.++  |+.. ...+ ++|+.+           
T Consensus        85 A~~~~~--~~~~~~~~~~~~Nv~gt~~ll~aa~~--~~~~~r~v~~SS~~~--~~~~~~~~~~~~E~~~~~~~~~~~~~~  158 (351)
T PLN02650         85 ATPMDF--ESKDPENEVIKPTVNGMLSIMKACAK--AKTVRRIVFTSSAGT--VNVEEHQKPVYDEDCWSDLDFCRRKKM  158 (351)
T ss_pred             CCCCCC--CCCCchhhhhhHHHHHHHHHHHHHHh--cCCceEEEEecchhh--cccCCCCCCccCcccCCchhhhhcccc
Confidence            986421  11222346789999999999999988  45 689999999876  5432 2222 455431           


Q ss_pred             CCChh-HHHHHHHHHHHHhccCCCCeEEEEEecEEEeCCCCcc--cchHHHHHHHhCCC-CCCCCcceecccHHHHHHHH
Q 018503          190 SGNDY-LAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGAL--AKMIPLFMMFAGGP-LGSGQQWFSWIHLDDIVNLI  265 (355)
Q Consensus       190 ~~~~y-~~k~~~~~~~~~~~~~~~~~~~i~Rp~~i~G~~~~~~--~~~~~~~~~~~~~~-~~~~~~~~~~i~v~Dva~~~  265 (355)
                      +...| .+|...|.+...+...++++++++||+++|||+....  ..+...+....+.. .......++|+|++|+|+++
T Consensus       159 ~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~v~V~Dva~a~  238 (351)
T PLN02650        159 TGWMYFVSKTLAEKAAWKYAAENGLDFISIIPTLVVGPFISTSMPPSLITALSLITGNEAHYSIIKQGQFVHLDDLCNAH  238 (351)
T ss_pred             ccchHHHHHHHHHHHHHHHHHHcCCeEEEECCCceECCCCCCCCCccHHHHHHHhcCCccccCcCCCcceeeHHHHHHHH
Confidence            12368 8898888888888777899999999999999975321  12222222222222 11112347999999999999


Q ss_pred             HHHHhCCCCCCceEecCCCccCHHHHHHHHHHHhCCCCCCCCcHHHHHHHhcccceeeecCccccchhHHhCCCCCCccC
Q 018503          266 YEALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPFKYRY  345 (355)
Q Consensus       266 ~~~~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~lG~~p~~~~  345 (355)
                      +.+++++...+.| +++++++|+.|+++.+.+.++..   .+|... .....     .......+++|++++||+|+++ 
T Consensus       239 ~~~l~~~~~~~~~-i~~~~~~s~~el~~~i~~~~~~~---~~~~~~-~~~~~-----~~~~~~~d~~k~~~lG~~p~~~-  307 (351)
T PLN02650        239 IFLFEHPAAEGRY-ICSSHDATIHDLAKMLREKYPEY---NIPARF-PGIDE-----DLKSVEFSSKKLTDLGFTFKYS-  307 (351)
T ss_pred             HHHhcCcCcCceE-EecCCCcCHHHHHHHHHHhCccc---CCCCCC-CCcCc-----ccccccCChHHHHHhCCCCCCC-
Confidence            9999876656788 56677899999999999988632   111110 00001     1123345677788899999996 


Q ss_pred             HHHHHHHHhC
Q 018503          346 VKDALKAIMS  355 (355)
Q Consensus       346 ~~~~l~~~~~  355 (355)
                      ++++|+++++
T Consensus       308 l~egl~~~i~  317 (351)
T PLN02650        308 LEDMFDGAIE  317 (351)
T ss_pred             HHHHHHHHHH
Confidence            9999999873

>KOG0747 consensus Putative NAD+-dependent epimerases [Carbohydrate transport and metabolism]

Probab=100.00  E-value=1.4e-36  Score=248.71  Aligned_cols=296  Identities=18%  Similarity=0.205  Sum_probs=222.0

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhC--CCeEEEEecCCch--hhccCCCCC--CccCCCeeecCCcchhhhcC--CCcEEEE
Q 018503           51 MTVSVTGATGFIGRRLVQRLQAD--NHQVRVLTRSRSK--AELIFPGKK--TRFFPGVMIAEEPQWRDCIQ--GSTAVVN  122 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~--~~~~~~~~~--~~~~~~~d~~~~~~~~~~~~--~~d~vi~  122 (355)
                      ++++||||+||||++.+..+...  .+..+.++.-.-.  ...+.....  .-.+...|+.+...+..++.  .+|.|+|
T Consensus         7 ~~vlItgg~gfi~Sn~~~~~~~~~p~~~~v~idkL~~~s~~~~l~~~~n~p~ykfv~~di~~~~~~~~~~~~~~id~vih   86 (331)
T KOG0747|consen    7 KNVLITGGAGFIGSNFINYLVDKYPDYKFVNLDKLDYCSNLKNLEPVRNSPNYKFVEGDIADADLVLYLFETEEIDTVIH   86 (331)
T ss_pred             ceEEEecCcCcchhhhhhhcccCCCCCcEEEEeecccccccchhhhhccCCCceEeeccccchHHHHhhhccCchhhhhh
Confidence            68999999999999999999986  5666666652211  111111110  00133456666666666663  7899999


Q ss_pred             CCCCCCCCCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCCCCcccc-CCCCC--CChh-HHHH
Q 018503          123 LAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFD-ESSPS--GNDY-LAEV  198 (355)
Q Consensus       123 ~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~-e~~~~--~~~y-~~k~  198 (355)
                      .|+..+. +.+-.++..+...|+.++..|++++..+ .++++|||+||..|  ||+..+.... |.+.+  .++| .+|.
T Consensus        87 faa~t~v-d~s~~~~~~~~~nnil~t~~Lle~~~~s-g~i~~fvhvSTdeV--YGds~~~~~~~E~s~~nPtnpyAasKa  162 (331)
T KOG0747|consen   87 FAAQTHV-DRSFGDSFEFTKNNILSTHVLLEAVRVS-GNIRRFVHVSTDEV--YGDSDEDAVVGEASLLNPTNPYAASKA  162 (331)
T ss_pred             hHhhhhh-hhhcCchHHHhcCCchhhhhHHHHHHhc-cCeeEEEEecccce--ecCccccccccccccCCCCCchHHHHH
Confidence            9997533 3344456677889999999999999985 48999999999999  9988776665 66654  4577 8888


Q ss_pred             HHHHHHHHhccCCCCeEEEEEecEEEeCCCCcccchHHHH-H-HHhCCCC---CCCCcceecccHHHHHHHHHHHHhCCC
Q 018503          199 CREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLF-M-MFAGGPL---GSGQQWFSWIHLDDIVNLIYEALSNPS  273 (355)
Q Consensus       199 ~~~~~~~~~~~~~~~~~~i~Rp~~i~G~~~~~~~~~~~~~-~-~~~~~~~---~~~~~~~~~i~v~Dva~~~~~~~~~~~  273 (355)
                      +.|.....+...++++++++|.++||||+..+. ++++.+ + ...+.+.   ++|.+.++++|++|+++++..++++..
T Consensus       163 AaE~~v~Sy~~sy~lpvv~~R~nnVYGP~q~~~-klipkFi~l~~~~~~~~i~g~g~~~rs~l~veD~~ea~~~v~~Kg~  241 (331)
T KOG0747|consen  163 AAEMLVRSYGRSYGLPVVTTRMNNVYGPNQYPE-KLIPKFIKLAMRGKEYPIHGDGLQTRSYLYVEDVSEAFKAVLEKGE  241 (331)
T ss_pred             HHHHHHHHHhhccCCcEEEEeccCccCCCcChH-HHhHHHHHHHHhCCCcceecCcccceeeEeHHHHHHHHHHHHhcCC
Confidence            899999999999999999999999999986554 344433 2 3334443   899999999999999999999999977


Q ss_pred             CCCceEecCCCccCHHHHHHHHHHHhCCC-CCCCCcHHHHHHHhcccceeeecCccccchhHHhCCCCCCccCHHHHHHH
Q 018503          274 YRGVINGTAPNPVRLAEMCDHLGNVLGRP-SWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPFKYRYVKDALKA  352 (355)
Q Consensus       274 ~~~~~~i~~~~~~s~~el~~~i~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~lG~~p~~~~~~~~l~~  352 (355)
                      .+++|||+++.+.+..|+++.+.+.+.+. +....+.+..-   -+...+......++++|++.|||+|+++ |++||++
T Consensus       242 ~geIYNIgtd~e~~~~~l~k~i~eli~~~~~~~~~~p~~~~---v~dRp~nd~Ry~~~~eKik~LGw~~~~p-~~eGLrk  317 (331)
T KOG0747|consen  242 LGEIYNIGTDDEMRVIDLAKDICELFEKRLPNIDTEPFIFF---VEDRPYNDLRYFLDDEKIKKLGWRPTTP-WEEGLRK  317 (331)
T ss_pred             ccceeeccCcchhhHHHHHHHHHHHHHHhccCCCCCCccee---cCCCCcccccccccHHHHHhcCCcccCc-HHHHHHH
Confidence            78899999999999999999999999875 22222222111   0111112234677889999999999998 9999999


Q ss_pred             HhC
Q 018503          353 IMS  355 (355)
Q Consensus       353 ~~~  355 (355)
                      +++
T Consensus       318 tie  320 (331)
T KOG0747|consen  318 TIE  320 (331)
T ss_pred             HHH
Confidence            985

>PLN02653 GDP-mannose 4,6-dehydratase

Probab=100.00  E-value=5.3e-36  Score=270.20  Aligned_cols=291  Identities=15%  Similarity=0.144  Sum_probs=212.4

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhh--ccCCC-------CCCccCCCeeecCCcchhhhcC--CCc
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAE--LIFPG-------KKTRFFPGVMIAEEPQWRDCIQ--GST  118 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~--~~~~~-------~~~~~~~~~d~~~~~~~~~~~~--~~d  118 (355)
                      +|+||||||+||||++|+++|++.|++|++++|..+...  .....       .....+..+|+.|.+.+.++++  ++|
T Consensus         6 ~~~vlVTGatGfiG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d   85 (340)
T PLN02653          6 RKVALITGITGQDGSYLTEFLLSKGYEVHGIIRRSSNFNTQRLDHIYIDPHPNKARMKLHYGDLSDASSLRRWLDDIKPD   85 (340)
T ss_pred             CCEEEEECCCCccHHHHHHHHHHCCCEEEEEecccccccccchhhhccccccccCceEEEEecCCCHHHHHHHHHHcCCC
Confidence            478999999999999999999999999999998754211  11000       0000133478889888888886  479


Q ss_pred             EEEECCCCCCCCCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCC-----cEEEEeeeeeeeeCCCCCccccCCCCC--C
Q 018503          119 AVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVR-----PSVLVSATALGYYGTSETEVFDESSPS--G  191 (355)
Q Consensus       119 ~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~-----~~v~~Ss~~~~~yg~~~~~~~~e~~~~--~  191 (355)
                      +|||+|+.... ......+...+++|+.++.++++++..  .+++     +||++||.++  ||.... +++|+.+.  .
T Consensus        86 ~Vih~A~~~~~-~~~~~~~~~~~~~N~~gt~~ll~~~~~--~~~~~~~~~~~v~~Ss~~v--yg~~~~-~~~E~~~~~p~  159 (340)
T PLN02653         86 EVYNLAAQSHV-AVSFEMPDYTADVVATGALRLLEAVRL--HGQETGRQIKYYQAGSSEM--YGSTPP-PQSETTPFHPR  159 (340)
T ss_pred             EEEECCcccch-hhhhhChhHHHHHHHHHHHHHHHHHHH--hccccccceeEEEeccHHH--hCCCCC-CCCCCCCCCCC
Confidence            99999997432 222344567778999999999999988  4543     8999999988  996544 67777664  4


Q ss_pred             Chh-HHHHHHHHHHHHhccCCCCeEEEEEecEEEeCCCCc--ccchHHHH--HHHhCCC--C--CCCCcceecccHHHHH
Q 018503          192 NDY-LAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGA--LAKMIPLF--MMFAGGP--L--GSGQQWFSWIHLDDIV  262 (355)
Q Consensus       192 ~~y-~~k~~~~~~~~~~~~~~~~~~~i~Rp~~i~G~~~~~--~~~~~~~~--~~~~~~~--~--~~~~~~~~~i~v~Dva  262 (355)
                      +.| .+|...|.....+..++++.++..|+.++|||+...  ...++..+  ....+.+  +  +++++.++|+|++|+|
T Consensus       160 ~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~v~D~a  239 (340)
T PLN02653        160 SPYAVAKVAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRAVGRIKVGLQKKLFLGNLDASRDWGFAGDYV  239 (340)
T ss_pred             ChhHHHHHHHHHHHHHHHHHcCCeEEEeeeccccCCCCCcccchhHHHHHHHHHHcCCCCceEeCCCcceecceeHHHHH
Confidence            568 888888888888777778999999999999986432  11222221  2233432  2  7788999999999999


Q ss_pred             HHHHHHHhCCCCCCceEecCCCccCHHHHHHHHHHHhCCCC--CCCCcHHHHHHHhcccceeeecCccccchhHH-hCCC
Q 018503          263 NLIYEALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPS--WLPVPEFALKAVLGEGAFVVLEGQRVVPARAK-ELGF  339 (355)
Q Consensus       263 ~~~~~~~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~-~lG~  339 (355)
                      ++++.+++... .+.||+++++++|+.|+++.+.+.+|.+.  .+.+......  ..+     ......+++|++ ++||
T Consensus       240 ~a~~~~~~~~~-~~~yni~~g~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~--~~~-----~~~~~~d~~k~~~~lgw  311 (340)
T PLN02653        240 EAMWLMLQQEK-PDDYVVATEESHTVEEFLEEAFGYVGLNWKDHVEIDPRYFR--PAE-----VDNLKGDASKAREVLGW  311 (340)
T ss_pred             HHHHHHHhcCC-CCcEEecCCCceeHHHHHHHHHHHcCCCCCcceeeCcccCC--ccc-----cccccCCHHHHHHHhCC
Confidence            99999998754 57999999999999999999999998641  1111110000  011     123346788885 5899


Q ss_pred             CCCccCHHHHHHHHhC
Q 018503          340 PFKYRYVKDALKAIMS  355 (355)
Q Consensus       340 ~p~~~~~~~~l~~~~~  355 (355)
                      +|+++ ++|+|+++++
T Consensus       312 ~p~~~-l~~gi~~~~~  326 (340)
T PLN02653        312 KPKVG-FEQLVKMMVD  326 (340)
T ss_pred             CCCCC-HHHHHHHHHH
Confidence            99996 9999999873

>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase

Probab=100.00  E-value=8.2e-36  Score=269.70  Aligned_cols=292  Identities=18%  Similarity=0.177  Sum_probs=210.4

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhcc---CCCCCCccCCCeeecCCcchhhhcC--CCcEEEECC
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELI---FPGKKTRFFPGVMIAEEPQWRDCIQ--GSTAVVNLA  124 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~---~~~~~~~~~~~~d~~~~~~~~~~~~--~~d~vi~~a  124 (355)
                      +|+||||||+||||+++++.|+++|++|++++|+.......   ...........+|+.|.+++.++++  ++|+|||+|
T Consensus         4 ~k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vih~A   83 (349)
T TIGR02622         4 GKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPNLFELLNLAKKIEDHFGDIRDAAKLRKAIAEFKPEIVFHLA   83 (349)
T ss_pred             CCEEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCccchhHHHHHhhcCCceEEEccCCCHHHHHHHHhhcCCCEEEECC
Confidence            47999999999999999999999999999999977543211   0000001134568889999988887  469999999


Q ss_pred             CCCCCCCCChhhHHHHHHHhhhhHHHHHHHHHcCCCC-CCcEEEEeeeeeeeeCCCC-CccccCCCC--CCChh-HHHHH
Q 018503          125 GTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEG-VRPSVLVSATALGYYGTSE-TEVFDESSP--SGNDY-LAEVC  199 (355)
Q Consensus       125 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~-~~~~v~~Ss~~~~~yg~~~-~~~~~e~~~--~~~~y-~~k~~  199 (355)
                      +.... .....++...+++|+.++.++++++..  .+ ++++|++||..+  ||... ..+++|+.+  +...| .+|..
T Consensus        84 ~~~~~-~~~~~~~~~~~~~N~~g~~~ll~a~~~--~~~~~~iv~~SS~~v--yg~~~~~~~~~e~~~~~p~~~Y~~sK~~  158 (349)
T TIGR02622        84 AQPLV-RKSYADPLETFETNVMGTVNLLEAIRA--IGSVKAVVNVTSDKC--YRNDEWVWGYRETDPLGGHDPYSSSKAC  158 (349)
T ss_pred             ccccc-ccchhCHHHHHHHhHHHHHHHHHHHHh--cCCCCEEEEEechhh--hCCCCCCCCCccCCCCCCCCcchhHHHH
Confidence            96422 233455678889999999999999987  44 789999999988  88543 234566544  34567 78887


Q ss_pred             HHHHHHHhccC-------CCCeEEEEEecEEEeCCCCcccchHHHH--HHHhCCCC--CCCCcceecccHHHHHHHHHHH
Q 018503          200 REWEGTALKVN-------KDVRLALIRIGIVLGKDGGALAKMIPLF--MMFAGGPL--GSGQQWFSWIHLDDIVNLIYEA  268 (355)
Q Consensus       200 ~~~~~~~~~~~-------~~~~~~i~Rp~~i~G~~~~~~~~~~~~~--~~~~~~~~--~~~~~~~~~i~v~Dva~~~~~~  268 (355)
                      .+.....+...       .+++++++||+++|||+......+++.+  ....+.++  +++++.++|+|++|+|++++.+
T Consensus       159 ~e~~~~~~~~~~~~~~~~~~i~~~~lR~~~vyGp~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~rd~i~v~D~a~a~~~~  238 (349)
T TIGR02622       159 AELVIASYRSSFFGVANFHGIKIASARAGNVIGGGDWAEDRLIPDVIRAFSSNKIVIIRNPDATRPWQHVLEPLSGYLLL  238 (349)
T ss_pred             HHHHHHHHHHHhhcccccCCCcEEEEccCcccCCCcchhhhhhHHHHHHHhcCCCeEECCCCcccceeeHHHHHHHHHHH
Confidence            77777655443       2899999999999999753223344444  33344443  6788999999999999999988


Q ss_pred             HhCC-----CCCCceEecCC--CccCHHHHHHHHHHHhCCC-CCCCCcHHHHHHHhcccceeeecCccccchhHHh-CCC
Q 018503          269 LSNP-----SYRGVINGTAP--NPVRLAEMCDHLGNVLGRP-SWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKE-LGF  339 (355)
Q Consensus       269 ~~~~-----~~~~~~~i~~~--~~~s~~el~~~i~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~-lG~  339 (355)
                      +++.     ..++.||++++  ++++..|+++.+.+.++.. ..+..+...  ....     ......++++|+++ +||
T Consensus       239 ~~~~~~~~~~~~~~yni~s~~~~~~s~~~~~~~i~~~~~~~~~~~~~~~~~--~~~~-----~~~~~~~d~~k~~~~lgw  311 (349)
T TIGR02622       239 AEKLFTGQAEFAGAWNFGPRASDNARVVELVVDALEFWWGDDAEWEDDSDL--NHPH-----EARLLKLDSSKARTLLGW  311 (349)
T ss_pred             HHHHhhcCccccceeeeCCCcccCcCHHHHHHHHHHHhcCCCCceeeccCC--CCCc-----ccceeecCHHHHHHHhCC
Confidence            7642     13579999974  6899999999999877632 222211100  0001     12335668888865 899


Q ss_pred             CCCccCHHHHHHHHh
Q 018503          340 PFKYRYVKDALKAIM  354 (355)
Q Consensus       340 ~p~~~~~~~~l~~~~  354 (355)
                      +|+++ ++++|++++
T Consensus       312 ~p~~~-l~~gi~~~i  325 (349)
T TIGR02622       312 HPRWG-LEEAVSRTV  325 (349)
T ss_pred             CCCCC-HHHHHHHHH
Confidence            99996 999999876

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.

>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional

Probab=100.00  E-value=1.9e-35  Score=261.09  Aligned_cols=271  Identities=14%  Similarity=0.107  Sum_probs=196.9

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcC--CCcEEEECCCCCC
Q 018503           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ--GSTAVVNLAGTPI  128 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--~~d~vi~~a~~~~  128 (355)
                      ||||||||+||||++|+++|++.| +|++++|...             ....|+.|.+.+.++++  ++|+|||||+...
T Consensus         1 m~iLVtG~~GfiGs~l~~~L~~~g-~V~~~~~~~~-------------~~~~Dl~d~~~~~~~~~~~~~D~Vih~Aa~~~   66 (299)
T PRK09987          1 MNILLFGKTGQVGWELQRALAPLG-NLIALDVHST-------------DYCGDFSNPEGVAETVRKIRPDVIVNAAAHTA   66 (299)
T ss_pred             CeEEEECCCCHHHHHHHHHhhccC-CEEEeccccc-------------cccCCCCCHHHHHHHHHhcCCCEEEECCccCC
Confidence            689999999999999999999999 7999988642             22369999999998887  5899999999753


Q ss_pred             CCCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCCCCccccCCCCCC--Chh-HHHHHHHHHHH
Q 018503          129 GTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSG--NDY-LAEVCREWEGT  205 (355)
Q Consensus       129 ~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~--~~y-~~k~~~~~~~~  205 (355)
                       ......++...+.+|+.++.+++++|++  .+. ++||+||+.+  ||.....+++|++++.  +.| .+|...|....
T Consensus        67 -~~~~~~~~~~~~~~N~~~~~~l~~aa~~--~g~-~~v~~Ss~~V--y~~~~~~p~~E~~~~~P~~~Yg~sK~~~E~~~~  140 (299)
T PRK09987         67 -VDKAESEPEFAQLLNATSVEAIAKAANE--VGA-WVVHYSTDYV--FPGTGDIPWQETDATAPLNVYGETKLAGEKALQ  140 (299)
T ss_pred             -cchhhcCHHHHHHHHHHHHHHHHHHHHH--cCC-eEEEEccceE--ECCCCCCCcCCCCCCCCCCHHHHHHHHHHHHHH
Confidence             2334455677788999999999999999  565 7999999999  9877667888887754  457 67776666654


Q ss_pred             HhccCCCCeEEEEEecEEEeCCCCcccchHHHH--HHHhCCCC---CC--CCcceecccHHHHHHHHHHHHhCCCCCCce
Q 018503          206 ALKVNKDVRLALIRIGIVLGKDGGALAKMIPLF--MMFAGGPL---GS--GQQWFSWIHLDDIVNLIYEALSNPSYRGVI  278 (355)
Q Consensus       206 ~~~~~~~~~~~i~Rp~~i~G~~~~~~~~~~~~~--~~~~~~~~---~~--~~~~~~~i~v~Dva~~~~~~~~~~~~~~~~  278 (355)
                      .+    ..+++++|++++|||+...   +++.+  ....++++   ++  +...+++.+++|+++++..++..+...|+|
T Consensus       141 ~~----~~~~~ilR~~~vyGp~~~~---~~~~~~~~~~~~~~~~v~~d~~g~~~~~~~~~d~~~~~~~~~~~~~~~~giy  213 (299)
T PRK09987        141 EH----CAKHLIFRTSWVYAGKGNN---FAKTMLRLAKEREELSVINDQFGAPTGAELLADCTAHAIRVALNKPEVAGLY  213 (299)
T ss_pred             Hh----CCCEEEEecceecCCCCCC---HHHHHHHHHhcCCCeEEeCCCcCCCCCHHHHHHHHHHHHHHhhccCCCCCeE
Confidence            43    3467999999999997533   23322  22334443   33  455556667777888888777665445799


Q ss_pred             EecCCCccCHHHHHHHHHHHhCC---CC----CCCCcHHHHHHHhcccceeeecCccccchhHHh-CCCCCCccCHHHHH
Q 018503          279 NGTAPNPVRLAEMCDHLGNVLGR---PS----WLPVPEFALKAVLGEGAFVVLEGQRVVPARAKE-LGFPFKYRYVKDAL  350 (355)
Q Consensus       279 ~i~~~~~~s~~el~~~i~~~~g~---~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~-lG~~p~~~~~~~~l  350 (355)
                      |+++++++|+.|+++.+.+..+.   +.    ..+.+.........     ...+..++.+|+++ +||+|.  +|+++|
T Consensus       214 ni~~~~~~s~~e~~~~i~~~~~~~g~~~~~~~i~~~~~~~~~~~~~-----rp~~~~ld~~k~~~~lg~~~~--~~~~~l  286 (299)
T PRK09987        214 HLVASGTTTWHDYAALVFEEARKAGITLALNKLNAVPTSAYPTPAR-----RPHNSRLNTEKFQQNFALVLP--DWQVGV  286 (299)
T ss_pred             EeeCCCCccHHHHHHHHHHHHHhcCCCcCcCeeeecchhhcCCCCC-----CCCcccCCHHHHHHHhCCCCc--cHHHHH
Confidence            99999999999999999886542   21    01111111111011     12344677888876 999986  699999


Q ss_pred             HHHhC
Q 018503          351 KAIMS  355 (355)
Q Consensus       351 ~~~~~  355 (355)
                      +++++
T Consensus       287 ~~~~~  291 (299)
T PRK09987        287 KRMLT  291 (299)
T ss_pred             HHHHH
Confidence            98863

>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=100.00  E-value=6.4e-35  Score=260.63  Aligned_cols=288  Identities=22%  Similarity=0.312  Sum_probs=217.8

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcCCC-cEEEECCCCCCC
Q 018503           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGS-TAVVNLAGTPIG  129 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-d~vi~~a~~~~~  129 (355)
                      |+|||||||||||++|+++|++.||+|++++|............   .....|+.+.+.+.+.+++. |+|||+|+....
T Consensus         1 ~~ILVtG~tGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~---~~~~~d~~~~~~~~~~~~~~~d~vih~aa~~~~   77 (314)
T COG0451           1 MRILVTGGAGFIGSHLVERLLAAGHDVRGLDRLRDGLDPLLSGV---EFVVLDLTDRDLVDELAKGVPDAVIHLAAQSSV   77 (314)
T ss_pred             CeEEEEcCcccHHHHHHHHHHhCCCeEEEEeCCCcccccccccc---ceeeecccchHHHHHHHhcCCCEEEEccccCch
Confidence            45999999999999999999999999999999887655433111   14557878888888888877 999999997533


Q ss_pred             CCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCC-CCccccCC-CCCCC--hh-HHHHHHHHHH
Q 018503          130 TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTS-ETEVFDES-SPSGN--DY-LAEVCREWEG  204 (355)
Q Consensus       130 ~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~-~~~~~~e~-~~~~~--~y-~~k~~~~~~~  204 (355)
                      ......++..+++.|+.++.+++++|++  .+++++||.||.++  |+.. .+.+.+|+ .+..+  .| .+|...|...
T Consensus        78 ~~~~~~~~~~~~~~nv~gt~~ll~aa~~--~~~~~~v~~ss~~~--~~~~~~~~~~~E~~~~~~p~~~Yg~sK~~~E~~~  153 (314)
T COG0451          78 PDSNASDPAEFLDVNVDGTLNLLEAARA--AGVKRFVFASSVSV--VYGDPPPLPIDEDLGPPRPLNPYGVSKLAAEQLL  153 (314)
T ss_pred             hhhhhhCHHHHHHHHHHHHHHHHHHHHH--cCCCeEEEeCCCce--ECCCCCCCCcccccCCCCCCCHHHHHHHHHHHHH
Confidence            2211113556899999999999999999  89999999777666  5543 33367777 45444  48 8888888888


Q ss_pred             HHhccCCCCeEEEEEecEEEeCCCCcc-c-chHHH-H-HHHhCCC-C---CCCCcceecccHHHHHHHHHHHHhCCCCCC
Q 018503          205 TALKVNKDVRLALIRIGIVLGKDGGAL-A-KMIPL-F-MMFAGGP-L---GSGQQWFSWIHLDDIVNLIYEALSNPSYRG  276 (355)
Q Consensus       205 ~~~~~~~~~~~~i~Rp~~i~G~~~~~~-~-~~~~~-~-~~~~~~~-~---~~~~~~~~~i~v~Dva~~~~~~~~~~~~~~  276 (355)
                      ..+....+++++++||+++||++.... . .+... + ....+.+ +   +++...++++|++|++++++.+++++... 
T Consensus       154 ~~~~~~~~~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~-  232 (314)
T COG0451         154 RAYARLYGLPVVILRPFNVYGPGDKPDLSSGVVSAFIRQLLKGEPIIVIGGDGSQTRDFVYVDDVADALLLALENPDGG-  232 (314)
T ss_pred             HHHHHHhCCCeEEEeeeeeeCCCCCCCCCcCcHHHHHHHHHhCCCcceEeCCCceeEeeEeHHHHHHHHHHHHhCCCCc-
Confidence            777776789999999999999986432 1 12322 2 3444554 2   46678889999999999999999987655 


Q ss_pred             ceEecCCC-ccCHHHHHHHHHHHhCCCCCC-CCcHHHHHHHhcccceeeecCccccchhHH-hCCCCCCccCHHHHHHHH
Q 018503          277 VINGTAPN-PVRLAEMCDHLGNVLGRPSWL-PVPEFALKAVLGEGAFVVLEGQRVVPARAK-ELGFPFKYRYVKDALKAI  353 (355)
Q Consensus       277 ~~~i~~~~-~~s~~el~~~i~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~-~lG~~p~~~~~~~~l~~~  353 (355)
                      .||+++++ ++++.|+++.+.+.+|.+... .....       ...........++..|.+ ++||.|+++ +++++.++
T Consensus       233 ~~ni~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~lg~~p~~~-~~~~i~~~  304 (314)
T COG0451         233 VFNIGSGTAEITVRELAEAVAEAVGSKAPLIVYIPL-------GRRGDLREGKLLDISKARAALGWEPKVS-LEEGLADT  304 (314)
T ss_pred             EEEeCCCCCcEEHHHHHHHHHHHhCCCCcceeecCC-------CCCCcccccccCCHHHHHHHhCCCCCCC-HHHHHHHH
Confidence            99999997 899999999999999987331 11010       122334456777788885 799999975 99999987


Q ss_pred             h
Q 018503          354 M  354 (355)
Q Consensus       354 ~  354 (355)
                      +
T Consensus       305 ~  305 (314)
T COG0451         305 L  305 (314)
T ss_pred             H
Confidence            5

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=100.00  E-value=2.2e-35  Score=287.82  Aligned_cols=293  Identities=19%  Similarity=0.229  Sum_probs=213.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhC--CCeEEEEecCCc--hhhccCCC--CCCccCCCeeecCCcchhhhc--CCCcEE
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQAD--NHQVRVLTRSRS--KAELIFPG--KKTRFFPGVMIAEEPQWRDCI--QGSTAV  120 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~--~~~~~~~~--~~~~~~~~~d~~~~~~~~~~~--~~~d~v  120 (355)
                      ..|+|||||||||||++|+++|+++  +++|++++|...  ....+...  .....+...|+.|.+.+.+++  .++|+|
T Consensus         5 ~~~~VLVTGatGfIG~~lv~~Ll~~g~~~~V~~~d~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~D~V   84 (668)
T PLN02260          5 EPKNILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYCSNLKNLNPSKSSPNFKFVKGDIASADLVNYLLITEGIDTI   84 (668)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHhCCCCEEEEEeCCCccchhhhhhhcccCCCeEEEECCCCChHHHHHHHhhcCCCEE
Confidence            3479999999999999999999997  689999998531  11111110  000113346888888777665  589999


Q ss_pred             EECCCCCCCCCCChhhHHHHHHHhhhhHHHHHHHHHcCCCC-CCcEEEEeeeeeeeeCCCCCcc---ccCCCC--CCChh
Q 018503          121 VNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEG-VRPSVLVSATALGYYGTSETEV---FDESSP--SGNDY  194 (355)
Q Consensus       121 i~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~-~~~~v~~Ss~~~~~yg~~~~~~---~~e~~~--~~~~y  194 (355)
                      ||+|+.... ......+..++++|+.++.++++++++  .+ +++|||+||..+  ||.....+   .+|+.+  +.+.|
T Consensus        85 iHlAa~~~~-~~~~~~~~~~~~~Nv~gt~~ll~a~~~--~~~vkr~I~~SS~~v--yg~~~~~~~~~~~E~~~~~p~~~Y  159 (668)
T PLN02260         85 MHFAAQTHV-DNSFGNSFEFTKNNIYGTHVLLEACKV--TGQIRRFIHVSTDEV--YGETDEDADVGNHEASQLLPTNPY  159 (668)
T ss_pred             EECCCccCc-hhhhhCHHHHHHHHHHHHHHHHHHHHh--cCCCcEEEEEcchHH--hCCCccccccCccccCCCCCCCCc
Confidence            999997532 222334567889999999999999998  55 789999999998  98654332   244444  34567


Q ss_pred             -HHHHHHHHHHHHhccCCCCeEEEEEecEEEeCCCCcccchHHHH--HHHhCCCC---CCCCcceecccHHHHHHHHHHH
Q 018503          195 -LAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLF--MMFAGGPL---GSGQQWFSWIHLDDIVNLIYEA  268 (355)
Q Consensus       195 -~~k~~~~~~~~~~~~~~~~~~~i~Rp~~i~G~~~~~~~~~~~~~--~~~~~~~~---~~~~~~~~~i~v~Dva~~~~~~  268 (355)
                       .+|...|.+...+....+++++++||+++||++.... .+++.+  ....+.++   +++++.++|+|++|+|+++..+
T Consensus       160 ~~sK~~aE~~v~~~~~~~~l~~vilR~~~VyGp~~~~~-~~i~~~~~~a~~g~~i~i~g~g~~~r~~ihV~Dva~a~~~~  238 (668)
T PLN02260        160 SATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPE-KLIPKFILLAMQGKPLPIHGDGSNVRSYLYCEDVAEAFEVV  238 (668)
T ss_pred             HHHHHHHHHHHHHHHHHcCCCEEEECcccccCcCCCcc-cHHHHHHHHHhCCCCeEEecCCCceEeeEEHHHHHHHHHHH
Confidence             8888888888777766799999999999999975322 234333  33445543   6788899999999999999999


Q ss_pred             HhCCCCCCceEecCCCccCHHHHHHHHHHHhCCCCCCCCcHHHHHHHhcccceeeecCccccchhHHhCCCCCCccCHHH
Q 018503          269 LSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPFKYRYVKD  348 (355)
Q Consensus       269 ~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~lG~~p~~~~~~~  348 (355)
                      ++....+++||+++++++|+.|+++.+++.+|.+....+....     ..  ........++++|++++||+|+++ ++|
T Consensus       239 l~~~~~~~vyni~~~~~~s~~el~~~i~~~~g~~~~~~i~~~~-----~~--p~~~~~~~~d~~k~~~lGw~p~~~-~~e  310 (668)
T PLN02260        239 LHKGEVGHVYNIGTKKERRVIDVAKDICKLFGLDPEKSIKFVE-----NR--PFNDQRYFLDDQKLKKLGWQERTS-WEE  310 (668)
T ss_pred             HhcCCCCCEEEECCCCeeEHHHHHHHHHHHhCCCCcceeeecC-----CC--CCCcceeecCHHHHHHcCCCCCCC-HHH
Confidence            9876667899999999999999999999999975321110000     00  001122346778888999999986 999


Q ss_pred             HHHHHhC
Q 018503          349 ALKAIMS  355 (355)
Q Consensus       349 ~l~~~~~  355 (355)
                      +|+++++
T Consensus       311 gl~~~i~  317 (668)
T PLN02260        311 GLKKTME  317 (668)
T ss_pred             HHHHHHH
Confidence            9999863

>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional

Probab=100.00  E-value=2.5e-35  Score=267.20  Aligned_cols=297  Identities=16%  Similarity=0.195  Sum_probs=208.9

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhCCCe-EEEEecCCc--hhhccCCC--CCCccCCCeeecCCcchhhhcC--CCcEEEEC
Q 018503           51 MTVSVTGATGFIGRRLVQRLQADNHQ-VRVLTRSRS--KAELIFPG--KKTRFFPGVMIAEEPQWRDCIQ--GSTAVVNL  123 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~g~~-V~~~~r~~~--~~~~~~~~--~~~~~~~~~d~~~~~~~~~~~~--~~d~vi~~  123 (355)
                      |||||||||||||++|+++|+++|++ |+++++...  ........  .........|+.|.+++.++++  ++|+|||+
T Consensus         1 mkilITGgtG~iG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~   80 (352)
T PRK10084          1 MKILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLADVSDSERYVFEHADICDRAELDRIFAQHQPDAVMHL   80 (352)
T ss_pred             CeEEEECCCcHHhHHHHHHHHHhCCCeEEEecCCCccchHHHHHhcccCCceEEEEecCCCHHHHHHHHHhcCCCEEEEC
Confidence            58999999999999999999999975 655665321  11111100  0000134579999999999886  48999999


Q ss_pred             CCCCCCCCCChhhHHHHHHHhhhhHHHHHHHHHcC-------CCCCCcEEEEeeeeeeeeCCCC---------C-ccccC
Q 018503          124 AGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINES-------PEGVRPSVLVSATALGYYGTSE---------T-EVFDE  186 (355)
Q Consensus       124 a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-------~~~~~~~v~~Ss~~~~~yg~~~---------~-~~~~e  186 (355)
                      |+.... ......+..++++|+.++.+++++|.+.       ..+++++|++||.++  ||...         . .+++|
T Consensus        81 A~~~~~-~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~~~~~i~~SS~~v--yg~~~~~~~~~~~~~~~~~~E  157 (352)
T PRK10084         81 AAESHV-DRSITGPAAFIETNIVGTYVLLEAARNYWSALDEDKKNAFRFHHISTDEV--YGDLPHPDEVENSEELPLFTE  157 (352)
T ss_pred             CcccCC-cchhcCchhhhhhhhHHHHHHHHHHHHhccccccccccceeEEEecchhh--cCCCCccccccccccCCCccc
Confidence            997432 1122345788999999999999999862       014568999999998  88521         1 13556


Q ss_pred             CCC--CCChh-HHHHHHHHHHHHhccCCCCeEEEEEecEEEeCCCCcccchHHHH--HHHhCCCC---CCCCcceecccH
Q 018503          187 SSP--SGNDY-LAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLF--MMFAGGPL---GSGQQWFSWIHL  258 (355)
Q Consensus       187 ~~~--~~~~y-~~k~~~~~~~~~~~~~~~~~~~i~Rp~~i~G~~~~~~~~~~~~~--~~~~~~~~---~~~~~~~~~i~v  258 (355)
                      +.+  +...| .+|...|.....+...++++++++|++.+|||+.... .+++.+  ....+.++   +++++.++++|+
T Consensus       158 ~~~~~p~~~Y~~sK~~~E~~~~~~~~~~g~~~vilr~~~v~Gp~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v  236 (352)
T PRK10084        158 TTAYAPSSPYSASKASSDHLVRAWLRTYGLPTIVTNCSNNYGPYHFPE-KLIPLVILNALEGKPLPIYGKGDQIRDWLYV  236 (352)
T ss_pred             cCCCCCCChhHHHHHHHHHHHHHHHHHhCCCEEEEeccceeCCCcCcc-chHHHHHHHHhcCCCeEEeCCCCeEEeeEEH
Confidence            554  34567 7888888888777767799999999999999975322 233332  33444442   678899999999


Q ss_pred             HHHHHHHHHHHhCCCCCCceEecCCCccCHHHHHHHHHHHhCCCCCCCCcHHH-HHHHhcccceeeecCccccchhHHh-
Q 018503          259 DDIVNLIYEALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFA-LKAVLGEGAFVVLEGQRVVPARAKE-  336 (355)
Q Consensus       259 ~Dva~~~~~~~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~k~~~-  336 (355)
                      +|+|+++..+++.+..++.||+++++++|+.|+++.+++.+|+......+... .......+.  ......++++|+++ 
T Consensus       237 ~D~a~a~~~~l~~~~~~~~yni~~~~~~s~~~~~~~i~~~~~~~~p~~~~~~~~~~~~~~~~~--~~~~~~~d~~k~~~~  314 (352)
T PRK10084        237 EDHARALYKVVTEGKAGETYNIGGHNEKKNLDVVLTICDLLDEIVPKATSYREQITYVADRPG--HDRRYAIDASKISRE  314 (352)
T ss_pred             HHHHHHHHHHHhcCCCCceEEeCCCCcCcHHHHHHHHHHHhccccccccchhhhccccccCCC--CCceeeeCHHHHHHH
Confidence            99999999999876556799999999999999999999999864211111110 110000000  01223567888965 


Q ss_pred             CCCCCCccCHHHHHHHHh
Q 018503          337 LGFPFKYRYVKDALKAIM  354 (355)
Q Consensus       337 lG~~p~~~~~~~~l~~~~  354 (355)
                      +||+|+++ ++++|++++
T Consensus       315 lg~~p~~~-l~~~l~~~~  331 (352)
T PRK10084        315 LGWKPQET-FESGIRKTV  331 (352)
T ss_pred             cCCCCcCC-HHHHHHHHH
Confidence            99999996 999999976

>PLN02896 cinnamyl-alcohol dehydrogenase

Probab=100.00  E-value=5.3e-35  Score=264.84  Aligned_cols=294  Identities=19%  Similarity=0.250  Sum_probs=203.0

Q ss_pred             cCCCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCC---CCCccCCCeeecCCcchhhhcCCCcEEEEC
Q 018503           47 KASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG---KKTRFFPGVMIAEEPQWRDCIQGSTAVVNL  123 (355)
Q Consensus        47 ~~~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~---~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~  123 (355)
                      .+..|+||||||+||||++++++|+++|++|++++|+..........   .........|+.+.+.+.++++++|+|||+
T Consensus         7 ~~~~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih~   86 (353)
T PLN02896          7 ESATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPAKSLHLLSKWKEGDRLRLFRADLQEEGSFDEAVKGCDGVFHV   86 (353)
T ss_pred             ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhhccCCeEEEEECCCCCHHHHHHHHcCCCEEEEC
Confidence            34568999999999999999999999999999999986543322110   000113346888888999999999999999


Q ss_pred             CCCCCCCC-CChhhHH-----HHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCCC--C---ccccCCCC---
Q 018503          124 AGTPIGTR-WSSEIKK-----EIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSE--T---EVFDESSP---  189 (355)
Q Consensus       124 a~~~~~~~-~~~~~~~-----~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~--~---~~~~e~~~---  189 (355)
                      |+...... ....++.     .+++.|+.++.+++++|.+. .++++||++||.++  ||...  +   .+++|+.+   
T Consensus        87 A~~~~~~~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~-~~~~~~v~~SS~~v--yg~~~~~~~~~~~~~E~~~~p~  163 (353)
T PLN02896         87 AASMEFDVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKS-KTVKRVVFTSSIST--LTAKDSNGRWRAVVDETCQTPI  163 (353)
T ss_pred             CccccCCccccccchhhhhhHHhHHHHHHHHHHHHHHHHhc-CCccEEEEEechhh--ccccccCCCCCCccCcccCCcH
Confidence            99753211 1122232     34556679999999999872 24789999999988  87432  1   34556421   


Q ss_pred             --------CCChh-HHHHHHHHHHHHhccCCCCeEEEEEecEEEeCCCCc-ccchHHHH-HHHhCCC--C---C---CCC
Q 018503          190 --------SGNDY-LAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGA-LAKMIPLF-MMFAGGP--L---G---SGQ  250 (355)
Q Consensus       190 --------~~~~y-~~k~~~~~~~~~~~~~~~~~~~i~Rp~~i~G~~~~~-~~~~~~~~-~~~~~~~--~---~---~~~  250 (355)
                              +...| .+|...|.+...+....+++++++||+++|||+... ...++..+ ....+..  .   +   ...
T Consensus       164 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~  243 (353)
T PLN02896        164 DHVWNTKASGWVYVLSKLLTEEAAFKYAKENGIDLVSVITTTVAGPFLTPSVPSSIQVLLSPITGDSKLFSILSAVNSRM  243 (353)
T ss_pred             HHhhccCCCCccHHHHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCcCCCCCchHHHHHHHhcCCcccccccccccccc
Confidence                    12368 899989988888877789999999999999997532 22222222 1112221  1   1   111


Q ss_pred             cceecccHHHHHHHHHHHHhCCCCCCceEecCCCccCHHHHHHHHHHHhCCC-CCCCCcHHHHHHHhcccceeeecCccc
Q 018503          251 QWFSWIHLDDIVNLIYEALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRP-SWLPVPEFALKAVLGEGAFVVLEGQRV  329 (355)
Q Consensus       251 ~~~~~i~v~Dva~~~~~~~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~  329 (355)
                      ..++|||++|+|++++.++..+...+.|++ +++++|+.|+++.+.+.++.. ..+....    ...++      ....+
T Consensus       244 ~~~dfi~v~Dva~a~~~~l~~~~~~~~~~~-~~~~~s~~el~~~i~~~~~~~~~~~~~~~----~~~~~------~~~~~  312 (353)
T PLN02896        244 GSIALVHIEDICDAHIFLMEQTKAEGRYIC-CVDSYDMSELINHLSKEYPCSNIQVRLDE----EKRGS------IPSEI  312 (353)
T ss_pred             CceeEEeHHHHHHHHHHHHhCCCcCccEEe-cCCCCCHHHHHHHHHHhCCCCCccccccc----cccCc------ccccc
Confidence            246999999999999999987655668854 567899999999999999743 1111111    00111      11234


Q ss_pred             cchhHHhCCCCCCccCHHHHHHHHhC
Q 018503          330 VPARAKELGFPFKYRYVKDALKAIMS  355 (355)
Q Consensus       330 ~~~k~~~lG~~p~~~~~~~~l~~~~~  355 (355)
                      +.+|++++||+|+++ ++++|+++++
T Consensus       313 ~~~~~~~lGw~p~~~-l~~~i~~~~~  337 (353)
T PLN02896        313 SSKKLRDLGFEYKYG-IEEIIDQTID  337 (353)
T ss_pred             CHHHHHHcCCCccCC-HHHHHHHHHH
Confidence            667778899999997 9999999863

>PLN02240 UDP-glucose 4-epimerase

Probab=100.00  E-value=1.7e-34  Score=261.85  Aligned_cols=292  Identities=19%  Similarity=0.230  Sum_probs=208.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhh----ccCC----CCCCccCCCeeecCCcchhhhcC--CCc
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAE----LIFP----GKKTRFFPGVMIAEEPQWRDCIQ--GST  118 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~----~~~~----~~~~~~~~~~d~~~~~~~~~~~~--~~d  118 (355)
                      ++++|+|||||||+|++|+++|++.|++|++++|......    ....    .........+|+.|++.+.++++  ++|
T Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~~~d   83 (352)
T PLN02240          4 MGRTILVTGGAGYIGSHTVLQLLLAGYKVVVIDNLDNSSEEALRRVKELAGDLGDNLVFHKVDLRDKEALEKVFASTRFD   83 (352)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCcchHHHHHHHHHhhcccCccceEEecCcCCHHHHHHHHHhCCCC
Confidence            4579999999999999999999999999999987543211    0000    00001134568889888888875  689


Q ss_pred             EEEECCCCCCCCCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCCCCccccCCCCCC--Chh-H
Q 018503          119 AVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSG--NDY-L  195 (355)
Q Consensus       119 ~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~--~~y-~  195 (355)
                      +|||+|+.... ......+...++.|+.++.++++++++  .+++++|++||.++  ||...+.+++|+.+..  ..| .
T Consensus        84 ~vih~a~~~~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~--~~~~~~v~~Ss~~v--yg~~~~~~~~E~~~~~~~~~Y~~  158 (352)
T PLN02240         84 AVIHFAGLKAV-GESVAKPLLYYDNNLVGTINLLEVMAK--HGCKKLVFSSSATV--YGQPEEVPCTEEFPLSATNPYGR  158 (352)
T ss_pred             EEEEccccCCc-cccccCHHHHHHHHHHHHHHHHHHHHH--cCCCEEEEEccHHH--hCCCCCCCCCCCCCCCCCCHHHH
Confidence            99999986422 112345667899999999999999988  68889999999888  9876667788877653  457 7


Q ss_pred             HHHHHHHHHHHhcc-CCCCeEEEEEecEEEeCCCC--------c-ccchHHHH-HHHhCC--CC---------CCCCcce
Q 018503          196 AEVCREWEGTALKV-NKDVRLALIRIGIVLGKDGG--------A-LAKMIPLF-MMFAGG--PL---------GSGQQWF  253 (355)
Q Consensus       196 ~k~~~~~~~~~~~~-~~~~~~~i~Rp~~i~G~~~~--------~-~~~~~~~~-~~~~~~--~~---------~~~~~~~  253 (355)
                      +|...|.....+.. ..+++++++|++++||+...        . ...+.+.+ ....+.  .+         +++.+.+
T Consensus       159 sK~~~e~~~~~~~~~~~~~~~~~~R~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~  238 (352)
T PLN02240        159 TKLFIEEICRDIHASDPEWKIILLRYFNPVGAHPSGRIGEDPKGIPNNLMPYVQQVAVGRRPELTVFGNDYPTKDGTGVR  238 (352)
T ss_pred             HHHHHHHHHHHHHHhcCCCCEEEEeecCcCCCCccccccCCCCCCcchHHHHHHHHHhCCCCceEEeCCCCCCCCCCEEE
Confidence            77777776665543 35789999999999997421        1 11233333 222222  11         2678899


Q ss_pred             ecccHHHHHHHHHHHHhCC----C-CCCceEecCCCccCHHHHHHHHHHHhCCCCCCCCcHHHHHHHhcccceeeecCcc
Q 018503          254 SWIHLDDIVNLIYEALSNP----S-YRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQR  328 (355)
Q Consensus       254 ~~i~v~Dva~~~~~~~~~~----~-~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  328 (355)
                      +|+|++|+|++++.++...    . .+++||+++++++|++|+++.+.+.+|++..+.....    ...+     .....
T Consensus       239 ~~i~v~D~a~a~~~a~~~~~~~~~~~~~~yni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~----~~~~-----~~~~~  309 (352)
T PLN02240        239 DYIHVMDLADGHIAALRKLFTDPDIGCEAYNLGTGKGTSVLEMVAAFEKASGKKIPLKLAPR----RPGD-----AEEVY  309 (352)
T ss_pred             eeEEHHHHHHHHHHHHhhhhhccCCCCceEEccCCCcEeHHHHHHHHHHHhCCCCCceeCCC----CCCC-----hhhhh
Confidence            9999999999999888642    2 2469999999999999999999999997632221110    0111     12233


Q ss_pred             ccchhHH-hCCCCCCccCHHHHHHHHhC
Q 018503          329 VVPARAK-ELGFPFKYRYVKDALKAIMS  355 (355)
Q Consensus       329 ~~~~k~~-~lG~~p~~~~~~~~l~~~~~  355 (355)
                      .+++|++ ++||+|+++ ++++|+++++
T Consensus       310 ~d~~k~~~~lg~~p~~~-l~~~l~~~~~  336 (352)
T PLN02240        310 ASTEKAEKELGWKAKYG-IDEMCRDQWN  336 (352)
T ss_pred             cCHHHHHHHhCCCCCCC-HHHHHHHHHH
Confidence            5677885 599999996 9999999863

>TIGR03466 HpnA hopanoid-associated sugar epimerase

Probab=100.00  E-value=4.8e-34  Score=256.56  Aligned_cols=292  Identities=21%  Similarity=0.268  Sum_probs=212.1

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcCCCcEEEECCCCCCCC
Q 018503           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTPIGT  130 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~~~~~  130 (355)
                      |+|+||||+||+|+++++.|+++|++|++++|+++.........  ......|+.|.+++.++++++|+|||+|+...  
T Consensus         1 ~~vlItG~~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~--~~~~~~D~~~~~~l~~~~~~~d~vi~~a~~~~--   76 (328)
T TIGR03466         1 MKVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSDRRNLEGLD--VEIVEGDLRDPASLRKAVAGCRALFHVAADYR--   76 (328)
T ss_pred             CeEEEECCccchhHHHHHHHHHCCCEEEEEEecCccccccccCC--ceEEEeeCCCHHHHHHHHhCCCEEEEeceecc--
Confidence            58999999999999999999999999999999876543222111  11345788899999999999999999997531  


Q ss_pred             CCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCC-CCCccccCCCCCC-----Chh-HHHHHHHHH
Q 018503          131 RWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGT-SETEVFDESSPSG-----NDY-LAEVCREWE  203 (355)
Q Consensus       131 ~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~-~~~~~~~e~~~~~-----~~y-~~k~~~~~~  203 (355)
                      . ....+...++.|+.++.++++++.+  .+++++|++||..+  |+. ..+.+.+|+.+..     ..| .+|...|..
T Consensus        77 ~-~~~~~~~~~~~n~~~~~~l~~~~~~--~~~~~~v~~SS~~~--~~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~e~~  151 (328)
T TIGR03466        77 L-WAPDPEEMYAANVEGTRNLLRAALE--AGVERVVYTSSVAT--LGVRGDGTPADETTPSSLDDMIGHYKRSKFLAEQA  151 (328)
T ss_pred             c-CCCCHHHHHHHHHHHHHHHHHHHHH--hCCCeEEEEechhh--cCcCCCCCCcCccCCCCcccccChHHHHHHHHHHH
Confidence            1 2334567889999999999999998  68899999999988  885 3445677776543     246 677777777


Q ss_pred             HHHhccCCCCeEEEEEecEEEeCCCCcccchHHHH-HHHhCCCCCCCCcceecccHHHHHHHHHHHHhCCCCCCceEecC
Q 018503          204 GTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLF-MMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRGVINGTA  282 (355)
Q Consensus       204 ~~~~~~~~~~~~~i~Rp~~i~G~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~~~~~~i~~  282 (355)
                      ...+....+++++++||+.+||++..........+ ....+......+...+++|++|+|++++.+++++..+..|+++ 
T Consensus       152 ~~~~~~~~~~~~~ilR~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~~~~~~~~-  230 (328)
T TIGR03466       152 ALEMAAEKGLPVVIVNPSTPIGPRDIKPTPTGRIIVDFLNGKMPAYVDTGLNLVHVDDVAEGHLLALERGRIGERYILG-  230 (328)
T ss_pred             HHHHHHhcCCCEEEEeCCccCCCCCCCCCcHHHHHHHHHcCCCceeeCCCcceEEHHHHHHHHHHHHhCCCCCceEEec-
Confidence            77666667999999999999999754221111112 2222222212234468999999999999999886555578775 


Q ss_pred             CCccCHHHHHHHHHHHhCCC-CCCCCcHHHHHHH----------hcccce-------eeecCccccchhHH-hCCCCCCc
Q 018503          283 PNPVRLAEMCDHLGNVLGRP-SWLPVPEFALKAV----------LGEGAF-------VVLEGQRVVPARAK-ELGFPFKY  343 (355)
Q Consensus       283 ~~~~s~~el~~~i~~~~g~~-~~~~~~~~~~~~~----------~~~~~~-------~~~~~~~~~~~k~~-~lG~~p~~  343 (355)
                      ++++|+.|+++.+.+.+|++ ..+++|.+.....          .+....       ....+..++++|++ .+||+|+ 
T Consensus       231 ~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lg~~p~-  309 (328)
T TIGR03466       231 GENLTLKQILDKLAEITGRPAPRVKLPRWLLLPVAWGAEALARLTGKEPRVTVDGVRMAKKKMFFSSAKAVRELGYRQR-  309 (328)
T ss_pred             CCCcCHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHhccCCCChHHHHHHcCCCCc-
Confidence            67899999999999999986 4456665543221          111110       01134567889995 5999996 


Q ss_pred             cCHHHHHHHHh
Q 018503          344 RYVKDALKAIM  354 (355)
Q Consensus       344 ~~~~~~l~~~~  354 (355)
                       +++++|++++
T Consensus       310 -~~~~~i~~~~  319 (328)
T TIGR03466       310 -PAREALRDAV  319 (328)
T ss_pred             -CHHHHHHHHH
Confidence             5999999986

The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.

>PRK10675 UDP-galactose-4-epimerase; Provisional

Probab=100.00  E-value=2.8e-34  Score=259.04  Aligned_cols=289  Identities=20%  Similarity=0.259  Sum_probs=207.5

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhcc----CC-CCCCccCCCeeecCCcchhhhcC--CCcEEEEC
Q 018503           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELI----FP-GKKTRFFPGVMIAEEPQWRDCIQ--GSTAVVNL  123 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~----~~-~~~~~~~~~~d~~~~~~~~~~~~--~~d~vi~~  123 (355)
                      |+||||||+||||++|+++|+++|++|++++|........    .. ......+...|+.|.+.+.++++  ++|+|||+
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vvh~   80 (338)
T PRK10675          1 MRVLVTGGSGYIGSHTCVQLLQNGHDVVILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALLTEILHDHAIDTVIHF   80 (338)
T ss_pred             CeEEEECCCChHHHHHHHHHHHCCCeEEEEecCCCchHhHHHHHHHhcCCCceEEEccCCCHHHHHHHHhcCCCCEEEEC
Confidence            6899999999999999999999999999998753322110    00 00000133478888888888876  68999999


Q ss_pred             CCCCCCCCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCCCCccccCCCCC---CChh-HHHHH
Q 018503          124 AGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPS---GNDY-LAEVC  199 (355)
Q Consensus       124 a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~---~~~y-~~k~~  199 (355)
                      |+..... .....+...+++|+.++.++++++++  .++++||++||.++  ||.....+++|+.+.   ...| .+|..
T Consensus        81 a~~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~--~~~~~~v~~Ss~~~--yg~~~~~~~~E~~~~~~p~~~Y~~sK~~  155 (338)
T PRK10675         81 AGLKAVG-ESVQKPLEYYDNNVNGTLRLISAMRA--ANVKNLIFSSSATV--YGDQPKIPYVESFPTGTPQSPYGKSKLM  155 (338)
T ss_pred             Ccccccc-chhhCHHHHHHHHHHHHHHHHHHHHH--cCCCEEEEeccHHh--hCCCCCCccccccCCCCCCChhHHHHHH
Confidence            9864221 12234567889999999999999998  78899999999988  986666677887664   4566 67777


Q ss_pred             HHHHHHHhccC-CCCeEEEEEecEEEeCCCCc---------ccchHHHH-HHHhCC--CC---------CCCCcceeccc
Q 018503          200 REWEGTALKVN-KDVRLALIRIGIVLGKDGGA---------LAKMIPLF-MMFAGG--PL---------GSGQQWFSWIH  257 (355)
Q Consensus       200 ~~~~~~~~~~~-~~~~~~i~Rp~~i~G~~~~~---------~~~~~~~~-~~~~~~--~~---------~~~~~~~~~i~  257 (355)
                      .|.....+... .+++++++|++.+||+....         ...+.+.+ ....+.  .+         ..+.+.++|+|
T Consensus       156 ~E~~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~  235 (338)
T PRK10675        156 VEQILTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIH  235 (338)
T ss_pred             HHHHHHHHHHhcCCCcEEEEEeeeecCCCcccccccCCCCChhHHHHHHHHHHhcCCCceEEeCCcCCCCCCcEEEeeEE
Confidence            77766666543 47999999999999974210         11233333 222221  11         25678899999


Q ss_pred             HHHHHHHHHHHHhCC--C-CCCceEecCCCccCHHHHHHHHHHHhCCCCCCCC-cHHHHHHHhcccceeeecCccccchh
Q 018503          258 LDDIVNLIYEALSNP--S-YRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPV-PEFALKAVLGEGAFVVLEGQRVVPAR  333 (355)
Q Consensus       258 v~Dva~~~~~~~~~~--~-~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~k  333 (355)
                      ++|+|++++.+++..  . .+++||+++++++|+.|+++.+.+.+|++..+.. |..     ..+     ......+++|
T Consensus       236 v~D~a~~~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~-----~~~-----~~~~~~~~~k  305 (338)
T PRK10675        236 VMDLADGHVAAMEKLANKPGVHIYNLGAGVGSSVLDVVNAFSKACGKPVNYHFAPRR-----EGD-----LPAYWADASK  305 (338)
T ss_pred             HHHHHHHHHHHHHhhhccCCCceEEecCCCceeHHHHHHHHHHHhCCCCCeeeCCCC-----CCc-----hhhhhcCHHH
Confidence            999999999998752  2 2469999999999999999999999997632221 210     001     1234467888


Q ss_pred             HH-hCCCCCCccCHHHHHHHHhC
Q 018503          334 AK-ELGFPFKYRYVKDALKAIMS  355 (355)
Q Consensus       334 ~~-~lG~~p~~~~~~~~l~~~~~  355 (355)
                      ++ .+||+|+++ ++++|+++++
T Consensus       306 ~~~~lg~~p~~~-~~~~~~~~~~  327 (338)
T PRK10675        306 ADRELNWRVTRT-LDEMAQDTWH  327 (338)
T ss_pred             HHHHhCCCCcCc-HHHHHHHHHH
Confidence            85 589999996 9999999863

>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones

Probab=100.00  E-value=5.5e-34  Score=247.67  Aligned_cols=247  Identities=20%  Similarity=0.276  Sum_probs=183.0

Q ss_pred             EEEcCCchHHHHHHHHHHhCC--CeEEEEecCCchhhc--cCCCCCCccCCCeeecCCcchhhhcCCCcEEEECCCCCCC
Q 018503           54 SVTGATGFIGRRLVQRLQADN--HQVRVLTRSRSKAEL--IFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTPIG  129 (355)
Q Consensus        54 lVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~--~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~~~~  129 (355)
                      |||||+||+|++|+++|+++|  ++|+++++.......  ...... ..+...|+.|++++.++++++|+|||+|+... 
T Consensus         1 LVTGgsGflG~~iv~~Ll~~g~~~~Vr~~d~~~~~~~~~~~~~~~~-~~~~~~Di~d~~~l~~a~~g~d~V~H~Aa~~~-   78 (280)
T PF01073_consen    1 LVTGGSGFLGSHIVRQLLERGYIYEVRVLDRSPPPKFLKDLQKSGV-KEYIQGDITDPESLEEALEGVDVVFHTAAPVP-   78 (280)
T ss_pred             CEEcCCcHHHHHHHHHHHHCCCceEEEEcccccccccchhhhcccc-eeEEEeccccHHHHHHHhcCCceEEEeCcccc-
Confidence            699999999999999999999  799999998765431  111111 11456899999999999999999999998642 


Q ss_pred             CCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCC-CCCcc---ccCCCCC----CChh-HHHHHH
Q 018503          130 TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGT-SETEV---FDESSPS----GNDY-LAEVCR  200 (355)
Q Consensus       130 ~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~-~~~~~---~~e~~~~----~~~y-~~k~~~  200 (355)
                       .+.....+.++++|+.||++|+++|++  .+++++||+||.++  +++ ..+.+   .+|..+.    ...| .+|..+
T Consensus        79 -~~~~~~~~~~~~vNV~GT~nvl~aa~~--~~VkrlVytSS~~v--v~~~~~~~~~~~~dE~~~~~~~~~~~Y~~SK~~A  153 (280)
T PF01073_consen   79 -PWGDYPPEEYYKVNVDGTRNVLEAARK--AGVKRLVYTSSISV--VFDNYKGDPIINGDEDTPYPSSPLDPYAESKALA  153 (280)
T ss_pred             -ccCcccHHHHHHHHHHHHHHHHHHHHH--cCCCEEEEEcCcce--eEeccCCCCcccCCcCCcccccccCchHHHHHHH
Confidence             233455678999999999999999999  79999999999998  543 11222   2454442    2356 666666


Q ss_pred             HHHHHHhcc---C--CCCeEEEEEecEEEeCCCCcccchHHHHHHHhCC---CCCCCCcceecccHHHHHHHHHHHHh--
Q 018503          201 EWEGTALKV---N--KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGG---PLGSGQQWFSWIHLDDIVNLIYEALS--  270 (355)
Q Consensus       201 ~~~~~~~~~---~--~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~i~v~Dva~~~~~~~~--  270 (355)
                      |.+......   +  ..+.+++|||+.||||++......+... ...+.   .++.++...+++|++|+|.+++.+++  
T Consensus       154 E~~V~~a~~~~~~~g~~l~t~~lRP~~IyGp~d~~~~~~~~~~-~~~g~~~~~~g~~~~~~~~vyV~NvA~ahvlA~~~L  232 (280)
T PF01073_consen  154 EKAVLEANGSELKNGGRLRTCALRPAGIYGPGDQRLVPRLVKM-VRSGLFLFQIGDGNNLFDFVYVENVAHAHVLAAQAL  232 (280)
T ss_pred             HHHHHhhcccccccccceeEEEEeccEEeCcccccccchhhHH-HHhcccceeecCCCceECcEeHHHHHHHHHHHHHHh
Confidence            655554443   1  2499999999999999875443322211 12221   23777888999999999999998765  


Q ss_pred             -CC----C-CCCceEecCCCccC-HHHHHHHHHHHhCCC-CC-CCCc
Q 018503          271 -NP----S-YRGVINGTAPNPVR-LAEMCDHLGNVLGRP-SW-LPVP  308 (355)
Q Consensus       271 -~~----~-~~~~~~i~~~~~~s-~~el~~~i~~~~g~~-~~-~~~~  308 (355)
                       .+    . .++.|+|.+++|+. +.|+...+.+.+|.+ +. +++|
T Consensus       233 ~~~~~~~~~~G~~y~itd~~p~~~~~~f~~~~~~~~G~~~~~~~~lp  279 (280)
T PF01073_consen  233 LEPGKPERVAGQAYFITDGEPVPSFWDFMRPLWEALGYPPPKSISLP  279 (280)
T ss_pred             ccccccccCCCcEEEEECCCccCcHHHHHHHHHHHCCCCCCcccCCC
Confidence             22    1 45699999999999 999999999999987 33 4544

3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process

>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase

Probab=100.00  E-value=1.2e-33  Score=249.03  Aligned_cols=272  Identities=19%  Similarity=0.204  Sum_probs=198.2

Q ss_pred             EEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcCC--CcEEEECCCCCCC
Q 018503           52 TVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQG--STAVVNLAGTPIG  129 (355)
Q Consensus        52 ~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~--~d~vi~~a~~~~~  129 (355)
                      ||||||||||+|++++++|++.||+|++++|+                 ..|+.+.+.+.+++++  +|+|||+|+... 
T Consensus         1 kilv~G~tG~iG~~l~~~l~~~g~~v~~~~r~-----------------~~d~~~~~~~~~~~~~~~~d~vi~~a~~~~-   62 (287)
T TIGR01214         1 RILITGANGQLGRELVQQLSPEGRVVVALTSS-----------------QLDLTDPEALERLLRAIRPDAVVNTAAYTD-   62 (287)
T ss_pred             CEEEEcCCCHHHHHHHHHHHhcCCEEEEeCCc-----------------ccCCCCHHHHHHHHHhCCCCEEEECCcccc-
Confidence            58999999999999999999999999999985                 1588888999988875  499999998642 


Q ss_pred             CCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCCCCccccCCCCCC--Chh-HHHHHHHHHHHH
Q 018503          130 TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSG--NDY-LAEVCREWEGTA  206 (355)
Q Consensus       130 ~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~--~~y-~~k~~~~~~~~~  206 (355)
                      .......+...+++|+.++.++++++++  .+. ++|++||.++  |+.....+++|++++.  ..| .+|...|.+...
T Consensus        63 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~--~~~-~~v~~Ss~~v--y~~~~~~~~~E~~~~~~~~~Y~~~K~~~E~~~~~  137 (287)
T TIGR01214        63 VDGAESDPEKAFAVNALAPQNLARAAAR--HGA-RLVHISTDYV--FDGEGKRPYREDDATNPLNVYGQSKLAGEQAIRA  137 (287)
T ss_pred             ccccccCHHHHHHHHHHHHHHHHHHHHH--cCC-eEEEEeeeee--ecCCCCCCCCCCCCCCCcchhhHHHHHHHHHHHH
Confidence            2222334567889999999999999988  554 8999999988  9876667788877653  345 555544444432


Q ss_pred             hccCCCCeEEEEEecEEEeCCCCcccchHHH-H-HHHhCCCC-CCCCcceecccHHHHHHHHHHHHhCC-CCCCceEecC
Q 018503          207 LKVNKDVRLALIRIGIVLGKDGGALAKMIPL-F-MMFAGGPL-GSGQQWFSWIHLDDIVNLIYEALSNP-SYRGVINGTA  282 (355)
Q Consensus       207 ~~~~~~~~~~i~Rp~~i~G~~~~~~~~~~~~-~-~~~~~~~~-~~~~~~~~~i~v~Dva~~~~~~~~~~-~~~~~~~i~~  282 (355)
                          .+.+++++||+.+||+..+.  .+... + ....+.++ ..++..++++|++|+|+++..++..+ ..+++||+++
T Consensus       138 ----~~~~~~ilR~~~v~G~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~~~~~~ni~~  211 (287)
T TIGR01214       138 ----AGPNALIVRTSWLYGGGGGR--NFVRTMLRLAGRGEELRVVDDQIGSPTYAKDLARVIAALLQRLARARGVYHLAN  211 (287)
T ss_pred             ----hCCCeEEEEeeecccCCCCC--CHHHHHHHHhhcCCCceEecCCCcCCcCHHHHHHHHHHHHhhccCCCCeEEEEC
Confidence                26899999999999997421  12222 2 22333343 23456789999999999999999876 3578999999


Q ss_pred             CCccCHHHHHHHHHHHhCCCC-CCCCcHH--HHHHHhcccceeeecCccccchhHHh-CCCCCCccCHHHHHHHHhC
Q 018503          283 PNPVRLAEMCDHLGNVLGRPS-WLPVPEF--ALKAVLGEGAFVVLEGQRVVPARAKE-LGFPFKYRYVKDALKAIMS  355 (355)
Q Consensus       283 ~~~~s~~el~~~i~~~~g~~~-~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~k~~~-lG~~p~~~~~~~~l~~~~~  355 (355)
                      ++++|+.|+++.+.+.+|++. .++.|..  ........+. .......++++|+++ +||++.  +++++|+++++
T Consensus       212 ~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~d~~~~~~~lg~~~~--~~~~~l~~~~~  285 (287)
T TIGR01214       212 SGQCSWYEFAQAIFEEAGADGLLLHPQEVKPISSKEYPRPA-RRPAYSVLDNTKLVKTLGTPLP--HWREALRAYLQ  285 (287)
T ss_pred             CCCcCHHHHHHHHHHHhCcccccccCceeEeecHHHcCCCC-CCCCccccchHHHHHHcCCCCc--cHHHHHHHHHh
Confidence            999999999999999999763 2222110  0000011100 011345688889976 899554  59999998864

This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.

>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase

Probab=100.00  E-value=7.8e-34  Score=253.59  Aligned_cols=281  Identities=19%  Similarity=0.210  Sum_probs=199.2

Q ss_pred             EEEEcCCchHHHHHHHHHHhCCC-eEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhc----CCCcEEEECCCCC
Q 018503           53 VSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCI----QGSTAVVNLAGTP  127 (355)
Q Consensus        53 IlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~----~~~d~vi~~a~~~  127 (355)
                      |||||||||||+++++.|.+.|+ +|++++|...... +.....  .....|+.+.+.++.+.    .++|+|||+|+..
T Consensus         1 ilItGatG~iG~~l~~~L~~~g~~~v~~~~~~~~~~~-~~~~~~--~~~~~d~~~~~~~~~~~~~~~~~~D~vvh~A~~~   77 (314)
T TIGR02197         1 IIVTGGAGFIGSNLVKALNERGITDILVVDNLRDGHK-FLNLAD--LVIADYIDKEDFLDRLEKGAFGKIEAIFHQGACS   77 (314)
T ss_pred             CEEeCCcchhhHHHHHHHHHcCCceEEEEecCCCchh-hhhhhh--eeeeccCcchhHHHHHHhhccCCCCEEEECcccc
Confidence            69999999999999999999997 7988887654321 111000  02223555666666554    4799999999964


Q ss_pred             CCCCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCCCCccccCCCC---CCChh-HHHHHHHHH
Q 018503          128 IGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSP---SGNDY-LAEVCREWE  203 (355)
Q Consensus       128 ~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~---~~~~y-~~k~~~~~~  203 (355)
                      .   ....++...+++|+.++.+++++|.+  .++ ++||+||.++  |+... .+++|+++   +...| .+|...|..
T Consensus        78 ~---~~~~~~~~~~~~n~~~~~~ll~~~~~--~~~-~~v~~SS~~v--y~~~~-~~~~e~~~~~~p~~~Y~~sK~~~e~~  148 (314)
T TIGR02197        78 D---TTETDGEYMMENNYQYSKRLLDWCAE--KGI-PFIYASSAAT--YGDGE-AGFREGRELERPLNVYGYSKFLFDQY  148 (314)
T ss_pred             C---ccccchHHHHHHHHHHHHHHHHHHHH--hCC-cEEEEccHHh--cCCCC-CCcccccCcCCCCCHHHHHHHHHHHH
Confidence            2   22345677889999999999999998  565 7999999998  98653 34555543   34567 677777766


Q ss_pred             HHHhc--cCCCCeEEEEEecEEEeCCCCc---ccchHHH-H-HHHhCCCC---------CCCCcceecccHHHHHHHHHH
Q 018503          204 GTALK--VNKDVRLALIRIGIVLGKDGGA---LAKMIPL-F-MMFAGGPL---------GSGQQWFSWIHLDDIVNLIYE  267 (355)
Q Consensus       204 ~~~~~--~~~~~~~~i~Rp~~i~G~~~~~---~~~~~~~-~-~~~~~~~~---------~~~~~~~~~i~v~Dva~~~~~  267 (355)
                      ...+.  ...+++++++||+.+||++...   ...++.. + ....+.++         +.+++.++++|++|+++++..
T Consensus       149 ~~~~~~~~~~~~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~D~a~~i~~  228 (314)
T TIGR02197       149 VRRRVLPEALSAQVVGLRYFNVYGPREYHKGKMASVAFHLFNQIKAGGNVKLFKSSEGFKDGEQLRDFVYVKDVVDVNLW  228 (314)
T ss_pred             HHHHhHhhccCCceEEEEEeeccCCCCCCCCCcccHHHHHHHHHhcCCCeEEecCccccCCCCceeeeEEHHHHHHHHHH
Confidence            65432  2336799999999999997532   1122322 2 23333322         457788999999999999999


Q ss_pred             HHhCCCCCCceEecCCCccCHHHHHHHHHHHhCCCCC---CCCcHHHHHHHhcccceeeecCccccchhHHh-CCCCCCc
Q 018503          268 ALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSW---LPVPEFALKAVLGEGAFVVLEGQRVVPARAKE-LGFPFKY  343 (355)
Q Consensus       268 ~~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~-lG~~p~~  343 (355)
                      ++.. ...++||+++++++|+.|+++.+.+.+|++..   .+.|....        .........+.+|+++ +||+|++
T Consensus       229 ~~~~-~~~~~yni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~--------~~~~~~~~~~~~k~~~~l~~~p~~  299 (314)
T TIGR02197       229 LLEN-GVSGIFNLGTGRARSFNDLADAVFKALGKDEKIEYIPMPEALR--------GKYQYFTQADITKLRAAGYYGPFT  299 (314)
T ss_pred             HHhc-ccCceEEcCCCCCccHHHHHHHHHHHhCCCCcceeccCccccc--------cccccccccchHHHHHhcCCCCcc
Confidence            9988 45679999999999999999999999997632   22332210        0011234567888864 8999999


Q ss_pred             cCHHHHHHHHhC
Q 018503          344 RYVKDALKAIMS  355 (355)
Q Consensus       344 ~~~~~~l~~~~~  355 (355)
                      + ++++|+++++
T Consensus       300 ~-l~~~l~~~~~  310 (314)
T TIGR02197       300 T-LEEGVKDYVQ  310 (314)
T ss_pred             c-HHHHHHHHHH
Confidence            6 9999999863

This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).

>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase

Probab=100.00  E-value=8.7e-34  Score=253.61  Aligned_cols=287  Identities=22%  Similarity=0.258  Sum_probs=207.8

Q ss_pred             EEEEEcCCchHHHHHHHHHHhCC--CeEEEEecCCch--hh---ccCCCCCCccCCCeeecCCcchhhhcCC--CcEEEE
Q 018503           52 TVSVTGATGFIGRRLVQRLQADN--HQVRVLTRSRSK--AE---LIFPGKKTRFFPGVMIAEEPQWRDCIQG--STAVVN  122 (355)
Q Consensus        52 ~IlVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~--~~---~~~~~~~~~~~~~~d~~~~~~~~~~~~~--~d~vi~  122 (355)
                      +|+||||||++|++++++|++.|  ++|++++|....  ..   ....... .....+|+.|++++.+++++  +|+|||
T Consensus         1 ~ilItGatG~iG~~l~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~Dl~~~~~~~~~~~~~~~d~vi~   79 (317)
T TIGR01181         1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVLDKLTYAGNLENLADLEDNPR-YRFVKGDIGDRELVSRLFTEHQPDAVVH   79 (317)
T ss_pred             CEEEEcCCchHHHHHHHHHHHhCCCCEEEEecCCCcchhhhhhhhhccCCC-cEEEEcCCcCHHHHHHHHhhcCCCEEEE
Confidence            59999999999999999999987  789998874321  11   1111000 01334688899999999986  899999


Q ss_pred             CCCCCCCCCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCC-CcEEEEeeeeeeeeCCCCCc-cccCCCCC--CChh-HHH
Q 018503          123 LAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGV-RPSVLVSATALGYYGTSETE-VFDESSPS--GNDY-LAE  197 (355)
Q Consensus       123 ~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~-~~~v~~Ss~~~~~yg~~~~~-~~~e~~~~--~~~y-~~k  197 (355)
                      +|+.... ......+..++++|+.++.++++++.+  ... .++|++||..+  ||..... +++|..+.  ...| .+|
T Consensus        80 ~a~~~~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~--~~~~~~~i~~Ss~~v--~g~~~~~~~~~e~~~~~~~~~Y~~sK  154 (317)
T TIGR01181        80 FAAESHV-DRSISGPAAFIETNVVGTYTLLEAVRK--YWHEFRFHHISTDEV--YGDLEKGDAFTETTPLAPSSPYSASK  154 (317)
T ss_pred             cccccCc-hhhhhCHHHHHHHHHHHHHHHHHHHHh--cCCCceEEEeeccce--eCCCCCCCCcCCCCCCCCCCchHHHH
Confidence            9986422 223345567889999999999999988  433 37999999998  8854432 56666554  3457 778


Q ss_pred             HHHHHHHHHhccCCCCeEEEEEecEEEeCCCCcccchHHHH--HHHhCCCC---CCCCcceecccHHHHHHHHHHHHhCC
Q 018503          198 VCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLF--MMFAGGPL---GSGQQWFSWIHLDDIVNLIYEALSNP  272 (355)
Q Consensus       198 ~~~~~~~~~~~~~~~~~~~i~Rp~~i~G~~~~~~~~~~~~~--~~~~~~~~---~~~~~~~~~i~v~Dva~~~~~~~~~~  272 (355)
                      ...+.....+..+.+++++++||+.+||+..... .+++.+  ....+.++   +++++.++|+|++|+|+++..++++.
T Consensus       155 ~~~e~~~~~~~~~~~~~~~i~R~~~i~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~D~a~~~~~~~~~~  233 (317)
T TIGR01181       155 AASDHLVRAYHRTYGLPALITRCSNNYGPYQFPE-KLIPLMITNALAGKPLPVYGDGQQVRDWLYVEDHCRAIYLVLEKG  233 (317)
T ss_pred             HHHHHHHHHHHHHhCCCeEEEEeccccCCCCCcc-cHHHHHHHHHhcCCCceEeCCCceEEeeEEHHHHHHHHHHHHcCC
Confidence            7777777766666799999999999999975322 233322  33445443   67788999999999999999999876


Q ss_pred             CCCCceEecCCCccCHHHHHHHHHHHhCCCCC-CCCcHHHHHHHhcccceeeecCccccchhHH-hCCCCCCccCHHHHH
Q 018503          273 SYRGVINGTAPNPVRLAEMCDHLGNVLGRPSW-LPVPEFALKAVLGEGAFVVLEGQRVVPARAK-ELGFPFKYRYVKDAL  350 (355)
Q Consensus       273 ~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~-~lG~~p~~~~~~~~l  350 (355)
                      ..+++||+++++++++.|+++.+.+.+|++.. +.....    ..+.     .....++++|++ .+||.|+++ ++++|
T Consensus       234 ~~~~~~~~~~~~~~s~~~~~~~i~~~~~~~~~~~~~~~~----~~~~-----~~~~~~~~~k~~~~lG~~p~~~-~~~~i  303 (317)
T TIGR01181       234 RVGETYNIGGGNERTNLEVVETILELLGKDEDLITHVED----RPGH-----DRRYAIDASKIKRELGWAPKYT-FEEGL  303 (317)
T ss_pred             CCCceEEeCCCCceeHHHHHHHHHHHhCCCcccccccCC----Cccc-----hhhhcCCHHHHHHHhCCCCCCc-HHHHH
Confidence            56679999999999999999999999996521 111000    0000     111235677885 599999996 99999


Q ss_pred             HHHhC
Q 018503          351 KAIMS  355 (355)
Q Consensus       351 ~~~~~  355 (355)
                      +++++
T Consensus       304 ~~~~~  308 (317)
T TIGR01181       304 RKTVQ  308 (317)
T ss_pred             HHHHH
Confidence            98763

This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.

>PLN00016 RNA-binding protein; Provisional

Probab=100.00  E-value=4.1e-34  Score=260.88  Aligned_cols=274  Identities=19%  Similarity=0.226  Sum_probs=190.3

Q ss_pred             CCCCEEEEE----cCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCC---------CCCccCCCeeecCCcchhhhc
Q 018503           48 ASQMTVSVT----GATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG---------KKTRFFPGVMIAEEPQWRDCI  114 (355)
Q Consensus        48 ~~~~~IlVt----GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~---------~~~~~~~~~d~~~~~~~~~~~  114 (355)
                      .++|+||||    |||||||++|+++|++.||+|++++|+..........         .........|+.|   +.+++
T Consensus        50 ~~~~~VLVt~~~~GatG~iG~~lv~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d---~~~~~  126 (378)
T PLN00016         50 VEKKKVLIVNTNSGGHAFIGFYLAKELVKAGHEVTLFTRGKEPSQKMKKEPFSRFSELSSAGVKTVWGDPAD---VKSKV  126 (378)
T ss_pred             cccceEEEEeccCCCceeEhHHHHHHHHHCCCEEEEEecCCcchhhhccCchhhhhHhhhcCceEEEecHHH---HHhhh
Confidence            345789999    9999999999999999999999999987542211100         0000012234433   54544


Q ss_pred             --CCCcEEEECCCCCCCCCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCC
Q 018503          115 --QGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGN  192 (355)
Q Consensus       115 --~~~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~  192 (355)
                        .++|+|||+++.                 +..++.+++++|++  .++++|||+||.++  ||.....+..|+++..+
T Consensus       127 ~~~~~d~Vi~~~~~-----------------~~~~~~~ll~aa~~--~gvkr~V~~SS~~v--yg~~~~~p~~E~~~~~p  185 (378)
T PLN00016        127 AGAGFDVVYDNNGK-----------------DLDEVEPVADWAKS--PGLKQFLFCSSAGV--YKKSDEPPHVEGDAVKP  185 (378)
T ss_pred             ccCCccEEEeCCCC-----------------CHHHHHHHHHHHHH--cCCCEEEEEccHhh--cCCCCCCCCCCCCcCCC
Confidence              479999999763                 13467789999998  78999999999998  98766666677665443


Q ss_pred             hhHHHHHHHHHHHHhccCCCCeEEEEEecEEEeCCCCcccchHHH-H-HHHhCCCC---CCCCcceecccHHHHHHHHHH
Q 018503          193 DYLAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPL-F-MMFAGGPL---GSGQQWFSWIHLDDIVNLIYE  267 (355)
Q Consensus       193 ~y~~k~~~~~~~~~~~~~~~~~~~i~Rp~~i~G~~~~~~~~~~~~-~-~~~~~~~~---~~~~~~~~~i~v~Dva~~~~~  267 (355)
                      .. +|...|...    ...+++++++||+++||+.....  +... + ....+.++   +.+++.++++|++|+|++++.
T Consensus       186 ~~-sK~~~E~~l----~~~~l~~~ilRp~~vyG~~~~~~--~~~~~~~~~~~~~~i~~~g~g~~~~~~i~v~Dva~ai~~  258 (378)
T PLN00016        186 KA-GHLEVEAYL----QKLGVNWTSFRPQYIYGPGNNKD--CEEWFFDRLVRGRPVPIPGSGIQLTQLGHVKDLASMFAL  258 (378)
T ss_pred             cc-hHHHHHHHH----HHcCCCeEEEeceeEECCCCCCc--hHHHHHHHHHcCCceeecCCCCeeeceecHHHHHHHHHH
Confidence            22 454444332    23589999999999999975321  2221 1 33445443   567888999999999999999


Q ss_pred             HHhCCC-CCCceEecCCCccCHHHHHHHHHHHhCCCCCC-CCcHHHHHHHhccccee--eecCccccchhHHh-CCCCCC
Q 018503          268 ALSNPS-YRGVINGTAPNPVRLAEMCDHLGNVLGRPSWL-PVPEFALKAVLGEGAFV--VLEGQRVVPARAKE-LGFPFK  342 (355)
Q Consensus       268 ~~~~~~-~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~-~~~~~~~~~~~~~~~~~--~~~~~~~~~~k~~~-lG~~p~  342 (355)
                      ++.++. .+++||+++++.+|+.|+++.+++.+|++..+ .++.....  .+.....  .......+++|+++ |||+|+
T Consensus       259 ~l~~~~~~~~~yni~~~~~~s~~el~~~i~~~~g~~~~i~~~~~~~~~--~~~~~~~p~~~~~~~~d~~ka~~~LGw~p~  336 (378)
T PLN00016        259 VVGNPKAAGQIFNIVSDRAVTFDGMAKACAKAAGFPEEIVHYDPKAVG--FGAKKAFPFRDQHFFASPRKAKEELGWTPK  336 (378)
T ss_pred             HhcCccccCCEEEecCCCccCHHHHHHHHHHHhCCCCceeecCccccC--ccccccccccccccccCHHHHHHhcCCCCC
Confidence            998864 46799999999999999999999999987422 22222110  1100000  11122357788864 999999


Q ss_pred             ccCHHHHHHHHhC
Q 018503          343 YRYVKDALKAIMS  355 (355)
Q Consensus       343 ~~~~~~~l~~~~~  355 (355)
                      ++ ++|+|+++++
T Consensus       337 ~~-l~egl~~~~~  348 (378)
T PLN00016        337 FD-LVEDLKDRYE  348 (378)
T ss_pred             CC-HHHHHHHHHH
Confidence            96 9999998863

>KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis]

Probab=100.00  E-value=1.7e-33  Score=236.29  Aligned_cols=291  Identities=21%  Similarity=0.228  Sum_probs=224.5

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhh-------ccCCCCCCccCCCeeecCCcchhhhcC--CCcEE
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAE-------LIFPGKKTRFFPGVMIAEEPQWRDCIQ--GSTAV  120 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-------~~~~~~~~~~~~~~d~~~~~~~~~~~~--~~d~v  120 (355)
                      .++||||||+||||+|.+-+|+++||.|.+++.-.....       .+........+..+|+.|.+.++++|+  ++|.|
T Consensus         2 ~~~VLVtGgaGyiGsht~l~L~~~gy~v~~vDNl~n~~~~sl~r~~~l~~~~~~v~f~~~Dl~D~~~L~kvF~~~~fd~V   81 (343)
T KOG1371|consen    2 GKHVLVTGGAGYIGSHTVLALLKRGYGVVIVDNLNNSYLESLKRVRQLLGEGKSVFFVEGDLNDAEALEKLFSEVKFDAV   81 (343)
T ss_pred             CcEEEEecCCcceehHHHHHHHhCCCcEEEEecccccchhHHHHHHHhcCCCCceEEEEeccCCHHHHHHHHhhcCCceE
Confidence            368999999999999999999999999999998544321       111111111245689999999999996  68999


Q ss_pred             EECCCCCCCCCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCCCCccccCCCC---CCChh-HH
Q 018503          121 VNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSP---SGNDY-LA  196 (355)
Q Consensus       121 i~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~---~~~~y-~~  196 (355)
                      +|+|+.. ....+.+++..++..|+.++.+|++++++  .+++.+||.||+.+  ||.+...|++|..+   |.++| .+
T Consensus        82 ~Hfa~~~-~vgeS~~~p~~Y~~nNi~gtlnlLe~~~~--~~~~~~V~sssatv--YG~p~~ip~te~~~t~~p~~pyg~t  156 (343)
T KOG1371|consen   82 MHFAALA-AVGESMENPLSYYHNNIAGTLNLLEVMKA--HNVKALVFSSSATV--YGLPTKVPITEEDPTDQPTNPYGKT  156 (343)
T ss_pred             Eeehhhh-ccchhhhCchhheehhhhhHHHHHHHHHH--cCCceEEEecceee--ecCcceeeccCcCCCCCCCCcchhh
Confidence            9999974 44556777889999999999999999999  78999999999999  99999999999876   45678 88


Q ss_pred             HHHHHHHHHHhccCCCCeEEEEEecEEEe--CCC-------CcccchHHHH---HHHhC-------CCC--CCCCcceec
Q 018503          197 EVCREWEGTALKVNKDVRLALIRIGIVLG--KDG-------GALAKMIPLF---MMFAG-------GPL--GSGQQWFSW  255 (355)
Q Consensus       197 k~~~~~~~~~~~~~~~~~~~i~Rp~~i~G--~~~-------~~~~~~~~~~---~~~~~-------~~~--~~~~~~~~~  255 (355)
                      |...|.+...+....++.++.+|.++++|  |..       +....+++..   .....       ..+  .+|+..+++
T Consensus       157 K~~iE~i~~d~~~~~~~~~~~LRyfn~~ga~p~Gr~ge~p~~~~nnl~p~v~~vaigr~~~l~v~g~d~~t~dgt~vrdy  236 (343)
T KOG1371|consen  157 KKAIEEIIHDYNKAYGWKVTGLRYFNVIGAHPSGRIGEAPLGIPNNLLPYVFQVAIGRRPNLQVVGRDYTTIDGTIVRDY  236 (343)
T ss_pred             hHHHHHHHHhhhccccceEEEEEeccccCccccCccCCCCccCcccccccccchhhcccccceeecCcccccCCCeeecc
Confidence            88888888888888889999999999998  321       1112233222   11111       111  466889999


Q ss_pred             ccHHHHHHHHHHHHhCCC---CCCceEecCCCccCHHHHHHHHHHHhCCCCCCCCcHHHHHHHhcccceeeecCccccch
Q 018503          256 IHLDDIVNLIYEALSNPS---YRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPA  332 (355)
Q Consensus       256 i~v~Dva~~~~~~~~~~~---~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  332 (355)
                      +|+-|.|+..+.++.+..   ..++||++.+...++.|+..+++++.|++.++++-.    ...++....+......   
T Consensus       237 i~v~Dla~~h~~al~k~~~~~~~~i~Nlgtg~g~~V~~lv~a~~k~~g~~~k~~~v~----~R~gdv~~~ya~~~~a---  309 (343)
T KOG1371|consen  237 IHVLDLADGHVAALGKLRGAAEFGVYNLGTGKGSSVLELVTAFEKALGVKIKKKVVP----RRNGDVAFVYANPSKA---  309 (343)
T ss_pred             eeeEehHHHHHHHhhccccchheeeEeecCCCCccHHHHHHHHHHHhcCCCCccccC----CCCCCceeeeeChHHH---
Confidence            999999999999998765   234999999999999999999999999874333322    1345544444443332   


Q ss_pred             hHHhCCCCCCccCHHHHHHHHh
Q 018503          333 RAKELGFPFKYRYVKDALKAIM  354 (355)
Q Consensus       333 k~~~lG~~p~~~~~~~~l~~~~  354 (355)
                       .++|||+|++. +++.+++++
T Consensus       310 -~~elgwk~~~~-iee~c~dlw  329 (343)
T KOG1371|consen  310 -QRELGWKAKYG-LQEMLKDLW  329 (343)
T ss_pred             -HHHhCCccccC-HHHHHHHHH
Confidence             47899999997 999999986

>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]

Probab=100.00  E-value=2.1e-32  Score=230.66  Aligned_cols=268  Identities=17%  Similarity=0.206  Sum_probs=208.4

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcC--CCcEEEECCCCCC
Q 018503           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ--GSTAVVNLAGTPI  128 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--~~d~vi~~a~~~~  128 (355)
                      |+|||||++|++|++|++.|. .+++|++++|..                 +|++|++.+.+++.  .+|+|||+|+++ 
T Consensus         1 M~iLi~G~~GqLG~~L~~~l~-~~~~v~a~~~~~-----------------~Ditd~~~v~~~i~~~~PDvVIn~AAyt-   61 (281)
T COG1091           1 MKILITGANGQLGTELRRALP-GEFEVIATDRAE-----------------LDITDPDAVLEVIRETRPDVVINAAAYT-   61 (281)
T ss_pred             CcEEEEcCCChHHHHHHHHhC-CCceEEeccCcc-----------------ccccChHHHHHHHHhhCCCEEEECcccc-
Confidence            569999999999999999998 779999998865                 79999999999996  579999999986 


Q ss_pred             CCCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCC--hh-HHHHHHHHHHH
Q 018503          129 GTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGN--DY-LAEVCREWEGT  205 (355)
Q Consensus       129 ~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~--~y-~~k~~~~~~~~  205 (355)
                      ..+..+..++..+.+|..++.++.++|++  .|. ++||+||.+|  |+...+.++.|++++.|  .| .+|+..|....
T Consensus        62 ~vD~aE~~~e~A~~vNa~~~~~lA~aa~~--~ga-~lVhiSTDyV--FDG~~~~~Y~E~D~~~P~nvYG~sKl~GE~~v~  136 (281)
T COG1091          62 AVDKAESEPELAFAVNATGAENLARAAAE--VGA-RLVHISTDYV--FDGEKGGPYKETDTPNPLNVYGRSKLAGEEAVR  136 (281)
T ss_pred             ccccccCCHHHHHHhHHHHHHHHHHHHHH--hCC-eEEEeecceE--ecCCCCCCCCCCCCCCChhhhhHHHHHHHHHHH
Confidence            44556677889999999999999999999  565 7999999999  88778889999988765  34 55555555444


Q ss_pred             HhccCCCCeEEEEEecEEEeCCCCcccchHHHH-HHHhCCCC-CCCCcceecccHHHHHHHHHHHHhCCCCCCceEecCC
Q 018503          206 ALKVNKDVRLALIRIGIVLGKDGGALAKMIPLF-MMFAGGPL-GSGQQWFSWIHLDDIVNLIYEALSNPSYRGVINGTAP  283 (355)
Q Consensus       206 ~~~~~~~~~~~i~Rp~~i~G~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~i~v~Dva~~~~~~~~~~~~~~~~~i~~~  283 (355)
                      .    .+-+.+|+|.+++||...+++..  ..+ ...+++++ ...++..+.+++.|+|+++..++......++||+++.
T Consensus       137 ~----~~~~~~I~Rtswv~g~~g~nFv~--tml~la~~~~~l~vv~Dq~gsPt~~~dlA~~i~~ll~~~~~~~~yH~~~~  210 (281)
T COG1091         137 A----AGPRHLILRTSWVYGEYGNNFVK--TMLRLAKEGKELKVVDDQYGSPTYTEDLADAILELLEKEKEGGVYHLVNS  210 (281)
T ss_pred             H----hCCCEEEEEeeeeecCCCCCHHH--HHHHHhhcCCceEEECCeeeCCccHHHHHHHHHHHHhccccCcEEEEeCC
Confidence            3    35789999999999998755422  222 33345555 4567888999999999999999998877779999998


Q ss_pred             CccCHHHHHHHHHHHhCCCCCCC--CcHHHHHHHhcccceeeecCccccchhHH-hCCCCCCccCHHHHHHHHhC
Q 018503          284 NPVRLAEMCDHLGNVLGRPSWLP--VPEFALKAVLGEGAFVVLEGQRVVPARAK-ELGFPFKYRYVKDALKAIMS  355 (355)
Q Consensus       284 ~~~s~~el~~~i~~~~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~k~~-~lG~~p~~~~~~~~l~~~~~  355 (355)
                      ..+||.|+++.|.+.++.+..+.  ............     ..+..++..|+. .+|+.|.  +|+++++.+++
T Consensus       211 g~~Swydfa~~I~~~~~~~~~v~~~~~~~~~~~~a~R-----P~~S~L~~~k~~~~~g~~~~--~w~~~l~~~~~  278 (281)
T COG1091         211 GECSWYEFAKAIFEEAGVDGEVIEPIASAEYPTPAKR-----PANSSLDTKKLEKAFGLSLP--EWREALKALLD  278 (281)
T ss_pred             CcccHHHHHHHHHHHhCCCccccccccccccCccCCC-----CcccccchHHHHHHhCCCCc--cHHHHHHHHHh
Confidence            88999999999999998664222  111111110111     124456667775 4788888  79999998763

>TIGR01179 galE UDP-glucose-4-epimerase

Probab=100.00  E-value=2e-32  Score=246.02  Aligned_cols=289  Identities=19%  Similarity=0.219  Sum_probs=206.9

Q ss_pred             EEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCC---CccCCCeeecCCcchhhhcC--CCcEEEECCCC
Q 018503           52 TVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKK---TRFFPGVMIAEEPQWRDCIQ--GSTAVVNLAGT  126 (355)
Q Consensus        52 ~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~---~~~~~~~d~~~~~~~~~~~~--~~d~vi~~a~~  126 (355)
                      |||||||+|+||++++++|+++|++|++++|.............   ......+|+.+.+.+.++++  ++|+|||+|+.
T Consensus         1 kvlV~GatG~iG~~l~~~l~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vv~~ag~   80 (328)
T TIGR01179         1 KILVTGGAGYIGSHTVRQLLESGHEVVVLDNLSNGSPEALKRGERITRVTFVEGDLRDRELLDRLFEEHKIDAVIHFAGL   80 (328)
T ss_pred             CEEEeCCCCHHHHHHHHHHHhCCCeEEEEeCCCccchhhhhhhccccceEEEECCCCCHHHHHHHHHhCCCcEEEECccc
Confidence            58999999999999999999999999988764432211111100   00123468888888888885  69999999996


Q ss_pred             CCCCCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCCCCccccCCCCC--CChh-HHHHHHHHH
Q 018503          127 PIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPS--GNDY-LAEVCREWE  203 (355)
Q Consensus       127 ~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~--~~~y-~~k~~~~~~  203 (355)
                      .... .....+...++.|+.++.++++++.+  .+++++|++||.++  ||.....+++|+++.  ...| .+|...+..
T Consensus        81 ~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~--~~~~~~v~~ss~~~--~g~~~~~~~~e~~~~~~~~~y~~sK~~~e~~  155 (328)
T TIGR01179        81 IAVG-ESVQDPLKYYRNNVVNTLNLLEAMQQ--TGVKKFIFSSSAAV--YGEPSSIPISEDSPLGPINPYGRSKLMSERI  155 (328)
T ss_pred             cCcc-hhhcCchhhhhhhHHHHHHHHHHHHh--cCCCEEEEecchhh--cCCCCCCCccccCCCCCCCchHHHHHHHHHH
Confidence            4221 12334556788999999999999998  67889999999887  886655577777664  3457 778777777


Q ss_pred             HHHhccC-CCCeEEEEEecEEEeCCCCc--------ccchHHHH-HHHh--CCC---------CCCCCcceecccHHHHH
Q 018503          204 GTALKVN-KDVRLALIRIGIVLGKDGGA--------LAKMIPLF-MMFA--GGP---------LGSGQQWFSWIHLDDIV  262 (355)
Q Consensus       204 ~~~~~~~-~~~~~~i~Rp~~i~G~~~~~--------~~~~~~~~-~~~~--~~~---------~~~~~~~~~~i~v~Dva  262 (355)
                      ...+..+ .+++++++||+.+||+....        ...+++.+ ....  ..+         ...++..++|||++|+|
T Consensus       156 ~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~~~D~a  235 (328)
T TIGR01179       156 LRDLSKADPGLSYVILRYFNVAGADPEGTIGEDPPGITHLIPYACQVAVGKRDKLTIFGTDYPTPDGTCVRDYIHVMDLA  235 (328)
T ss_pred             HHHHHHhccCCCEEEEecCcccCCCCCCccccCCcccchHHHHHHHHHHhCCCCeEEeCCcccCCCCceEEeeeeHHHHH
Confidence            7666555 68999999999999985321        12233333 2222  111         23567789999999999


Q ss_pred             HHHHHHHhCC---CCCCceEecCCCccCHHHHHHHHHHHhCCCCCCCCcHHHHHHHhcccceeeecCccccchhHH-hCC
Q 018503          263 NLIYEALSNP---SYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAK-ELG  338 (355)
Q Consensus       263 ~~~~~~~~~~---~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~-~lG  338 (355)
                      +++..++...   ..+++||+++++++|+.|+++.+++.+|++..+......    ..+     ......+++|++ .+|
T Consensus       236 ~~~~~~~~~~~~~~~~~~~n~~~~~~~s~~ei~~~~~~~~g~~~~~~~~~~~----~~~-----~~~~~~~~~~~~~~lg  306 (328)
T TIGR01179       236 DAHLAALEYLLNGGESHVYNLGYGQGFSVLEVIEAFKKVSGVDFPVELAPRR----PGD-----PASLVADASKIRRELG  306 (328)
T ss_pred             HHHHHHHhhhhcCCCcceEEcCCCCcccHHHHHHHHHHHhCCCcceEeCCCC----Ccc-----ccchhcchHHHHHHhC
Confidence            9999998752   245799999999999999999999999987433211100    011     112235677775 589


Q ss_pred             CCCCccCHHHHHHHHh
Q 018503          339 FPFKYRYVKDALKAIM  354 (355)
Q Consensus       339 ~~p~~~~~~~~l~~~~  354 (355)
                      |+|++++++++|++++
T Consensus       307 ~~p~~~~l~~~~~~~~  322 (328)
T TIGR01179       307 WQPKYTDLEIIIKTAW  322 (328)
T ss_pred             CCCCcchHHHHHHHHH
Confidence            9999977999999986

This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.

>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1

Probab=100.00  E-value=5.2e-34  Score=249.42  Aligned_cols=269  Identities=18%  Similarity=0.256  Sum_probs=183.8

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcC--CCcEEEECCCCCC
Q 018503           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ--GSTAVVNLAGTPI  128 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--~~d~vi~~a~~~~  128 (355)
                      ||||||||+|++|++|++.|.++|++|++++|.                 .+|+.|.+.+.+++.  ++|+||||||.. 
T Consensus         1 MriLI~GasG~lG~~l~~~l~~~~~~v~~~~r~-----------------~~dl~d~~~~~~~~~~~~pd~Vin~aa~~-   62 (286)
T PF04321_consen    1 MRILITGASGFLGSALARALKERGYEVIATSRS-----------------DLDLTDPEAVAKLLEAFKPDVVINCAAYT-   62 (286)
T ss_dssp             EEEEEETTTSHHHHHHHHHHTTTSEEEEEESTT-----------------CS-TTSHHHHHHHHHHH--SEEEE------
T ss_pred             CEEEEECCCCHHHHHHHHHHhhCCCEEEEeCch-----------------hcCCCCHHHHHHHHHHhCCCeEeccceee-
Confidence            799999999999999999999999999999876                 278889999988886  589999999975 


Q ss_pred             CCCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCChh-HHHHHHHHHHHHh
Q 018503          129 GTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-LAEVCREWEGTAL  207 (355)
Q Consensus       129 ~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~~y-~~k~~~~~~~~~~  207 (355)
                      ..++.+.+++..+.+|+.++.+|+++|..  .+. ++||+||..|  |+...+.+++|++++.|.- |++.+.+.|....
T Consensus        63 ~~~~ce~~p~~a~~iN~~~~~~la~~~~~--~~~-~li~~STd~V--FdG~~~~~y~E~d~~~P~~~YG~~K~~~E~~v~  137 (286)
T PF04321_consen   63 NVDACEKNPEEAYAINVDATKNLAEACKE--RGA-RLIHISTDYV--FDGDKGGPYTEDDPPNPLNVYGRSKLEGEQAVR  137 (286)
T ss_dssp             -HHHHHHSHHHHHHHHTHHHHHHHHHHHH--CT--EEEEEEEGGG--S-SSTSSSB-TTS----SSHHHHHHHHHHHHHH
T ss_pred             cHHhhhhChhhhHHHhhHHHHHHHHHHHH--cCC-cEEEeeccEE--EcCCcccccccCCCCCCCCHHHHHHHHHHHHHH
Confidence            44566777889999999999999999998  454 8999999999  9877778899988865532 4444444444443


Q ss_pred             ccCCCCeEEEEEecEEEeCCCCcccchHHHH--HHHhCCCC-CCCCcceecccHHHHHHHHHHHHhCCC----CCCceEe
Q 018503          208 KVNKDVRLALIRIGIVLGKDGGALAKMIPLF--MMFAGGPL-GSGQQWFSWIHLDDIVNLIYEALSNPS----YRGVING  280 (355)
Q Consensus       208 ~~~~~~~~~i~Rp~~i~G~~~~~~~~~~~~~--~~~~~~~~-~~~~~~~~~i~v~Dva~~~~~~~~~~~----~~~~~~i  280 (355)
                      ..  .-++.|+|++.+||+....   +...+  ....++.+ ...+..+++++++|+|+++..++++..    ..|+||+
T Consensus       138 ~~--~~~~~IlR~~~~~g~~~~~---~~~~~~~~~~~~~~i~~~~d~~~~p~~~~dlA~~i~~l~~~~~~~~~~~Giyh~  212 (286)
T PF04321_consen  138 AA--CPNALILRTSWVYGPSGRN---FLRWLLRRLRQGEPIKLFDDQYRSPTYVDDLARVILELIEKNLSGASPWGIYHL  212 (286)
T ss_dssp             HH---SSEEEEEE-SEESSSSSS---HHHHHHHHHHCTSEEEEESSCEE--EEHHHHHHHHHHHHHHHHH-GGG-EEEE-
T ss_pred             Hh--cCCEEEEecceecccCCCc---hhhhHHHHHhcCCeeEeeCCceeCCEEHHHHHHHHHHHHHhcccccccceeEEE
Confidence            32  3499999999999995433   23222  33455555 455778999999999999999998754    2589999


Q ss_pred             cCCCccCHHHHHHHHHHHhCCCCCC--CCcHHHHHHHhcccceeeecCccccchhHHh-CCCCCCccCHHHHHHHHh
Q 018503          281 TAPNPVRLAEMCDHLGNVLGRPSWL--PVPEFALKAVLGEGAFVVLEGQRVVPARAKE-LGFPFKYRYVKDALKAIM  354 (355)
Q Consensus       281 ~~~~~~s~~el~~~i~~~~g~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~-lG~~p~~~~~~~~l~~~~  354 (355)
                      ++++.+|+.|+++.+.+.+|.+...  +.+......    . .....+..++..|++. +|.+|.  +|+++|++++
T Consensus       213 ~~~~~~S~~e~~~~i~~~~~~~~~~i~~~~~~~~~~----~-~~rp~~~~L~~~kl~~~~g~~~~--~~~~~l~~~~  282 (286)
T PF04321_consen  213 SGPERVSRYEFAEAIAKILGLDPELIKPVSSSEFPR----A-APRPRNTSLDCRKLKNLLGIKPP--PWREGLEELV  282 (286)
T ss_dssp             --BS-EEHHHHHHHHHHHHTHCTTEEEEESSTTSTT----S-SGS-SBE-B--HHHHHCTTS-----BHHHHHHHHH
T ss_pred             ecCcccCHHHHHHHHHHHhCCCCceEEecccccCCC----C-CCCCCcccccHHHHHHccCCCCc--CHHHHHHHHH
Confidence            9999999999999999999976411  222211111    0 1123466788888876 699987  7999999876

1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.

>PLN02686 cinnamoyl-CoA reductase

Probab=100.00  E-value=2.9e-32  Score=247.12  Aligned_cols=288  Identities=15%  Similarity=0.111  Sum_probs=195.8

Q ss_pred             cccCCCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCC---------CCCccCCCeeecCCcchhhhcC
Q 018503           45 TQKASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG---------KKTRFFPGVMIAEEPQWRDCIQ  115 (355)
Q Consensus        45 ~~~~~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~---------~~~~~~~~~d~~~~~~~~~~~~  115 (355)
                      +..+++|+||||||+||||+++++.|+++||+|++++|+.+....+...         .........|+.|.+.+.++++
T Consensus        48 ~~~~~~k~VLVTGatGfIG~~lv~~L~~~G~~V~~~~r~~~~~~~l~~l~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~i~  127 (367)
T PLN02686         48 GADAEARLVCVTGGVSFLGLAIVDRLLRHGYSVRIAVDTQEDKEKLREMEMFGEMGRSNDGIWTVMANLTEPESLHEAFD  127 (367)
T ss_pred             ccCCCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhhccccccCCceEEEEcCCCCHHHHHHHHH
Confidence            3445568999999999999999999999999999988876443221100         0000133468889999999999


Q ss_pred             CCcEEEECCCCCCCCCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCC--CC--ccccCCCC--
Q 018503          116 GSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTS--ET--EVFDESSP--  189 (355)
Q Consensus       116 ~~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~--~~--~~~~e~~~--  189 (355)
                      ++|+|||+|+....... ........+.|+.++.+++++|++. .++++|||+||..+..||..  ..  ..++|+.+  
T Consensus       128 ~~d~V~hlA~~~~~~~~-~~~~~~~~~~nv~gt~~llea~~~~-~~v~r~V~~SS~~~~vyg~~~~~~~~~~i~E~~~~~  205 (367)
T PLN02686        128 GCAGVFHTSAFVDPAGL-SGYTKSMAELEAKASENVIEACVRT-ESVRKCVFTSSLLACVWRQNYPHDLPPVIDEESWSD  205 (367)
T ss_pred             hccEEEecCeeeccccc-ccccchhhhhhHHHHHHHHHHHHhc-CCccEEEEeccHHHhcccccCCCCCCcccCCCCCCC
Confidence            99999999986422111 1122355678999999999999872 27999999999742227642  12  23555432  


Q ss_pred             ------CCChh-HHHHHHHHHHHHhccCCCCeEEEEEecEEEeCCCCcccchHHHHHHHhCCCCCCCCcceecccHHHHH
Q 018503          190 ------SGNDY-LAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIV  262 (355)
Q Consensus       190 ------~~~~y-~~k~~~~~~~~~~~~~~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva  262 (355)
                            +...| .+|...|.....+....+++++++||+++|||+..... .........+.....++..++|+|++|+|
T Consensus       206 ~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~gl~~v~lRp~~vyGp~~~~~~-~~~~~~~~~g~~~~~g~g~~~~v~V~Dva  284 (367)
T PLN02686        206 ESFCRDNKLWYALGKLKAEKAAWRAARGKGLKLATICPALVTGPGFFRRN-STATIAYLKGAQEMLADGLLATADVERLA  284 (367)
T ss_pred             hhhcccccchHHHHHHHHHHHHHHHHHhcCceEEEEcCCceECCCCCCCC-ChhHHHHhcCCCccCCCCCcCeEEHHHHH
Confidence                  22358 88888888887776667999999999999999743211 11122333333211223345799999999


Q ss_pred             HHHHHHHhCC---CCCCceEecCCCccCHHHHHHHHHHHhCCCCCCCCcHHHHHHHhcccceeeecCccccchhHH-hCC
Q 018503          263 NLIYEALSNP---SYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAK-ELG  338 (355)
Q Consensus       263 ~~~~~~~~~~---~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~-~lG  338 (355)
                      ++++.+++..   ..+++| +++++++++.|+++.+.+.+|.+........  +. .++.     ....++++|++ .+|
T Consensus       285 ~A~~~al~~~~~~~~~~~y-i~~g~~~s~~e~~~~i~~~~g~~~~~~~~~~--~~-~~d~-----~~~~~d~~kl~~~l~  355 (367)
T PLN02686        285 EAHVCVYEAMGNKTAFGRY-ICFDHVVSREDEAEELARQIGLPINKIAGNS--SS-DDTP-----ARFELSNKKLSRLMS  355 (367)
T ss_pred             HHHHHHHhccCCCCCCCcE-EEeCCCccHHHHHHHHHHHcCCCCCcCCCch--hh-cCCc-----ccccccHHHHHHHHH
Confidence            9999999852   345688 8888999999999999999997632211111  00 1222     23445677785 599


Q ss_pred             CCCCcc
Q 018503          339 FPFKYR  344 (355)
Q Consensus       339 ~~p~~~  344 (355)
                      |+|+-.
T Consensus       356 ~~~~~~  361 (367)
T PLN02686        356 RTRRCC  361 (367)
T ss_pred             Hhhhcc
Confidence            998753

>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase

Probab=100.00  E-value=1.5e-31  Score=238.88  Aligned_cols=268  Identities=18%  Similarity=0.232  Sum_probs=191.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCC--CeEEEEecCCchhhccCCC--CCCccCCCeeecCCcchhhhcCCCcEEEECC
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADN--HQVRVLTRSRSKAELIFPG--KKTRFFPGVMIAEEPQWRDCIQGSTAVVNLA  124 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~--~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a  124 (355)
                      ++|+||||||+||||++|+++|+++|  ++|++++|+......+...  ........+|+.|.+.+.++++++|+|||+|
T Consensus         3 ~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~~~~iD~Vih~A   82 (324)
T TIGR03589         3 NNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKFPAPCLRFFIGDVRDKERLTRALRGVDYVVHAA   82 (324)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHhcCCEEEECc
Confidence            45799999999999999999999986  7999999876543211100  0001134579999999999999999999999


Q ss_pred             CCCCCCCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCChh-HHHHHHHHH
Q 018503          125 GTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-LAEVCREWE  203 (355)
Q Consensus       125 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~~y-~~k~~~~~~  203 (355)
                      |.... .....++...+++|+.++.++++++.+  .++++||++||...  +            .+...| .+|...|.+
T Consensus        83 g~~~~-~~~~~~~~~~~~~Nv~g~~~ll~aa~~--~~~~~iV~~SS~~~--~------------~p~~~Y~~sK~~~E~l  145 (324)
T TIGR03589        83 ALKQV-PAAEYNPFECIRTNINGAQNVIDAAID--NGVKRVVALSTDKA--A------------NPINLYGATKLASDKL  145 (324)
T ss_pred             ccCCC-chhhcCHHHHHHHHHHHHHHHHHHHHH--cCCCEEEEEeCCCC--C------------CCCCHHHHHHHHHHHH
Confidence            97432 223344567899999999999999998  68889999998643  1            123557 788777776


Q ss_pred             HHHh---ccCCCCeEEEEEecEEEeCCCCcccchHHHH--HHHhCC---CCCCCCcceecccHHHHHHHHHHHHhCCCCC
Q 018503          204 GTAL---KVNKDVRLALIRIGIVLGKDGGALAKMIPLF--MMFAGG---PLGSGQQWFSWIHLDDIVNLIYEALSNPSYR  275 (355)
Q Consensus       204 ~~~~---~~~~~~~~~i~Rp~~i~G~~~~~~~~~~~~~--~~~~~~---~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~~  275 (355)
                      ...+   ....|++++++||+++||++..    +++.+  ....+.   ++.++++.++|+|++|+|++++.++++...+
T Consensus       146 ~~~~~~~~~~~gi~~~~lR~g~v~G~~~~----~i~~~~~~~~~~~~~~~i~~~~~~r~~i~v~D~a~a~~~al~~~~~~  221 (324)
T TIGR03589       146 FVAANNISGSKGTRFSVVRYGNVVGSRGS----VVPFFKSLKEEGVTELPITDPRMTRFWITLEQGVNFVLKSLERMLGG  221 (324)
T ss_pred             HHHHHhhccccCcEEEEEeecceeCCCCC----cHHHHHHHHHhCCCCeeeCCCCceEeeEEHHHHHHHHHHHHhhCCCC
Confidence            6543   2356999999999999998743    33333  222333   3366788899999999999999999875434


Q ss_pred             CceEecCCCccCHHHHHHHHHHHhCCCCCCCCcHHHHHHHhcccceeeecCccccchhH-HhCCCCCCccCHHHHHH
Q 018503          276 GVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARA-KELGFPFKYRYVKDALK  351 (355)
Q Consensus       276 ~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~-~~lG~~p~~~~~~~~l~  351 (355)
                      .+| ++++..+++.|+++.+.+...... .+.+       .++.    .....++.+|+ +.+||+|+++ ++++++
T Consensus       222 ~~~-~~~~~~~sv~el~~~i~~~~~~~~-~~~~-------~g~~----~~~~~~~~~~~~~~lg~~~~~~-l~~~~~  284 (324)
T TIGR03589       222 EIF-VPKIPSMKITDLAEAMAPECPHKI-VGIR-------PGEK----LHEVMITEDDARHTYELGDYYA-ILPSIS  284 (324)
T ss_pred             CEE-ccCCCcEEHHHHHHHHHhhCCeeE-eCCC-------CCch----hHhhhcChhhhhhhcCCCCeEE-Eccccc
Confidence            567 566677999999999999754320 1111       1110    01122456667 4599999996 998875

This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.

>CHL00194 ycf39 Ycf39; Provisional

Probab=99.98  E-value=2.5e-31  Score=237.01  Aligned_cols=271  Identities=16%  Similarity=0.140  Sum_probs=188.2

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcCCCcEEEECCCCCCCC
Q 018503           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTPIGT  130 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~~~~~  130 (355)
                      |+|+|||||||+|++|+++|+++||+|++++|+.++...+....  ......|+.|++++.++++++|+|||+++..   
T Consensus         1 MkIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~~~~l~~~~--v~~v~~Dl~d~~~l~~al~g~d~Vi~~~~~~---   75 (317)
T CHL00194          1 MSLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRKASFLKEWG--AELVYGDLSLPETLPPSFKGVTAIIDASTSR---   75 (317)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcChHHhhhHhhcC--CEEEECCCCCHHHHHHHHCCCCEEEECCCCC---
Confidence            68999999999999999999999999999999875543222111  0144568899999999999999999997632   


Q ss_pred             CCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCChh-HHHHHHHHHHHHhcc
Q 018503          131 RWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-LAEVCREWEGTALKV  209 (355)
Q Consensus       131 ~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~~y-~~k~~~~~~~~~~~~  209 (355)
                       +  .++..+.++|+.++.+++++|++  .++++||++||.++..|+             ...| ..|...|..    ..
T Consensus        76 -~--~~~~~~~~~~~~~~~~l~~aa~~--~gvkr~I~~Ss~~~~~~~-------------~~~~~~~K~~~e~~----l~  133 (317)
T CHL00194         76 -P--SDLYNAKQIDWDGKLALIEAAKA--AKIKRFIFFSILNAEQYP-------------YIPLMKLKSDIEQK----LK  133 (317)
T ss_pred             -C--CCccchhhhhHHHHHHHHHHHHH--cCCCEEEEeccccccccC-------------CChHHHHHHHHHHH----HH
Confidence             1  12345677899999999999999  799999999985441121             1223 334333322    23


Q ss_pred             CCCCeEEEEEecEEEeCCCCcccchHHHHHHHhCCC--CCCCCcceecccHHHHHHHHHHHHhCCC-CCCceEecCCCcc
Q 018503          210 NKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGP--LGSGQQWFSWIHLDDIVNLIYEALSNPS-YRGVINGTAPNPV  286 (355)
Q Consensus       210 ~~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~i~v~Dva~~~~~~~~~~~-~~~~~~i~~~~~~  286 (355)
                      .++++++++||+.+|+......  ..+   ...+.+  +..++..++++|++|+|++++.++..+. .+++||+++++++
T Consensus       134 ~~~l~~tilRp~~~~~~~~~~~--~~~---~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~~~~~~ni~g~~~~  208 (317)
T CHL00194        134 KSGIPYTIFRLAGFFQGLISQY--AIP---ILEKQPIWITNESTPISYIDTQDAAKFCLKSLSLPETKNKTFPLVGPKSW  208 (317)
T ss_pred             HcCCCeEEEeecHHhhhhhhhh--hhh---hccCCceEecCCCCccCccCHHHHHHHHHHHhcCccccCcEEEecCCCcc
Confidence            4689999999998876421111  111   112233  2456677899999999999999998754 4679999999999


Q ss_pred             CHHHHHHHHHHHhCCC-CCCCCcHHHHHHH---hc---ccc---e-------eeecCcc-ccchhHH-hCCCCCC--ccC
Q 018503          287 RLAEMCDHLGNVLGRP-SWLPVPEFALKAV---LG---EGA---F-------VVLEGQR-VVPARAK-ELGFPFK--YRY  345 (355)
Q Consensus       287 s~~el~~~i~~~~g~~-~~~~~~~~~~~~~---~~---~~~---~-------~~~~~~~-~~~~k~~-~lG~~p~--~~~  345 (355)
                      |+.|+++.+++.+|++ ...++|.+..+..   ..   ...   .       ...++.. .+.++.. .+|+.|.  . +
T Consensus       209 s~~el~~~~~~~~g~~~~~~~vp~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~-~  287 (317)
T CHL00194        209 NSSEIISLCEQLSGQKAKISRVPLFLLKLLRQITGFFEWTWNISDRLAFVEILNTSNNFSSSMAELYKIFKIDPNELI-S  287 (317)
T ss_pred             CHHHHHHHHHHHhCCCCeEEeCCHHHHHHHHHHHhhcccchhhHHHHHHHHHHhcCCCcCCCHHHHHHHhCCChhhhh-h
Confidence            9999999999999987 3346665554321   11   100   0       0112222 2345564 5899984  3 4


Q ss_pred             HHHHHHHHh
Q 018503          346 VKDALKAIM  354 (355)
Q Consensus       346 ~~~~l~~~~  354 (355)
                      +++++++.+
T Consensus       288 ~~~~~~~~~  296 (317)
T CHL00194        288 LEDYFQEYF  296 (317)
T ss_pred             HHHHHHHHH
Confidence            999988765

>PLN02583 cinnamoyl-CoA reductase

Probab=99.97  E-value=3.5e-30  Score=227.49  Aligned_cols=273  Identities=16%  Similarity=0.147  Sum_probs=189.5

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhh------ccCCCCCCccCCCeeecCCcchhhhcCCCcEEEEC
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAE------LIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNL  123 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~------~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~  123 (355)
                      +++|+||||+||||++++++|+++||+|++++|+.+...      .+............|+.|.+.+.+++.++|.|+|+
T Consensus         6 ~k~vlVTGatG~IG~~lv~~Ll~~G~~V~~~~R~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~~~~~l~~~d~v~~~   85 (297)
T PLN02583          6 SKSVCVMDASGYVGFWLVKRLLSRGYTVHAAVQKNGETEIEKEIRGLSCEEERLKVFDVDPLDYHSILDALKGCSGLFCC   85 (297)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEEcCchhhhHHHHHHhcccCCCceEEEEecCCCHHHHHHHHcCCCEEEEe
Confidence            368999999999999999999999999999999643211      11100000113456899999999999999999998


Q ss_pred             CCCCCCCCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCC---CCccccCCCCCCC--------
Q 018503          124 AGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTS---ETEVFDESSPSGN--------  192 (355)
Q Consensus       124 a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~---~~~~~~e~~~~~~--------  192 (355)
                      ++....  . ......++++|+.++.++++++.+. .+++++|++||.++..|+..   ...+++|+.+..+        
T Consensus        86 ~~~~~~--~-~~~~~~~~~~nv~gt~~ll~aa~~~-~~v~riV~~SS~~a~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~  161 (297)
T PLN02583         86 FDPPSD--Y-PSYDEKMVDVEVRAAHNVLEACAQT-DTIEKVVFTSSLTAVIWRDDNISTQKDVDERSWSDQNFCRKFKL  161 (297)
T ss_pred             CccCCc--c-cccHHHHHHHHHHHHHHHHHHHHhc-CCccEEEEecchHheecccccCCCCCCCCcccCCCHHHHhhccc
Confidence            764321  1 1235678999999999999999872 25789999999876334421   2235667654321        


Q ss_pred             hh-HHHHHHHHHHHHhccCCCCeEEEEEecEEEeCCCCcccchHHHHHHHhCCCCCCCCcceecccHHHHHHHHHHHHhC
Q 018503          193 DY-LAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSN  271 (355)
Q Consensus       193 ~y-~~k~~~~~~~~~~~~~~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~  271 (355)
                      .| .+|...|.....+....+++++++||+++|||.......      ...+.....+...+++||++|+|++++.+++.
T Consensus       162 ~Y~~sK~~aE~~~~~~~~~~gi~~v~lrp~~v~Gp~~~~~~~------~~~~~~~~~~~~~~~~v~V~Dva~a~~~al~~  235 (297)
T PLN02583        162 WHALAKTLSEKTAWALAMDRGVNMVSINAGLLMGPSLTQHNP------YLKGAAQMYENGVLVTVDVNFLVDAHIRAFED  235 (297)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCcEEEEcCCcccCCCCCCchh------hhcCCcccCcccCcceEEHHHHHHHHHHHhcC
Confidence            46 778888887766665569999999999999997532211      11222111123346799999999999999998


Q ss_pred             CCCCCceEecCCCccCHHHHHHHHHHHhCCCCCCCCcHHHHHHHhcccceeeecCccccchhHHhCCCCC
Q 018503          272 PSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPF  341 (355)
Q Consensus       272 ~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~lG~~p  341 (355)
                      +...+.|+++++....+.++++++.+.+..-   ++|...... ..+     .....++++|+++|||++
T Consensus       236 ~~~~~r~~~~~~~~~~~~~~~~~~~~~~p~~---~~~~~~~~~-~~~-----~~~~~~~~~k~~~l~~~~  296 (297)
T PLN02583        236 VSSYGRYLCFNHIVNTEEDAVKLAQMLSPLI---PSPPPYEMQ-GSE-----VYQQRIRNKKLNKLMEDF  296 (297)
T ss_pred             cccCCcEEEecCCCccHHHHHHHHHHhCCCC---CCCCccccc-CCC-----ccccccChHHHHHhCccc
Confidence            7777799888776555788999999988632   232210000 001     133567788999999985

>KOG1431 consensus GDP-L-fucose synthetase [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones]

Probab=99.97  E-value=4.7e-31  Score=209.08  Aligned_cols=276  Identities=17%  Similarity=0.193  Sum_probs=215.5

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhCCC--eEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcC--CCcEEEECCCC
Q 018503           51 MTVSVTGATGFIGRRLVQRLQADNH--QVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ--GSTAVVNLAGT  126 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--~~d~vi~~a~~  126 (355)
                      |||||||++|.+|++|.+.+.+.|.  +=-++.-                ...+|+++..+.+++++  ++.+|||+|+.
T Consensus         2 ~kIlVtGg~GLVGsAi~~vv~~q~~~~e~wvf~~----------------skd~DLt~~a~t~~lF~~ekPthVIhlAAm   65 (315)
T KOG1431|consen    2 KKILVTGGTGLVGSAIVKVVQEQGFDDENWVFIG----------------SKDADLTNLADTRALFESEKPTHVIHLAAM   65 (315)
T ss_pred             ceEEEecCCchHHHHHHHHHHhcCCCCcceEEec----------------cccccccchHHHHHHHhccCCceeeehHhh
Confidence            6999999999999999999999875  1111111                22379999999999885  68999999998


Q ss_pred             CCCCCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCCCCccccCCCC----C---CChh-HHHH
Q 018503          127 PIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSP----S---GNDY-LAEV  198 (355)
Q Consensus       127 ~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~----~---~~~y-~~k~  198 (355)
                      .++-......+.+++..|+...-|+++.|.+  .++++++++.|+++  |.+....|++|..-    +   +-.| +.|.
T Consensus        66 VGGlf~N~~ynldF~r~Nl~indNVlhsa~e--~gv~K~vsclStCI--fPdkt~yPIdEtmvh~gpphpsN~gYsyAKr  141 (315)
T KOG1431|consen   66 VGGLFHNNTYNLDFIRKNLQINDNVLHSAHE--HGVKKVVSCLSTCI--FPDKTSYPIDETMVHNGPPHPSNFGYSYAKR  141 (315)
T ss_pred             hcchhhcCCCchHHHhhcceechhHHHHHHH--hchhhhhhhcceee--cCCCCCCCCCHHHhccCCCCCCchHHHHHHH
Confidence            7665555667789999999999999999999  89999999999999  99888889888642    2   2346 7787


Q ss_pred             HHHHHHHHhccCCCCeEEEEEecEEEeCCCCcc---cchHHHH-----HH-HhCC-C---CCCCCcceecccHHHHHHHH
Q 018503          199 CREWEGTALKVNKDVRLALIRIGIVLGKDGGAL---AKMIPLF-----MM-FAGG-P---LGSGQQWFSWIHLDDIVNLI  265 (355)
Q Consensus       199 ~~~~~~~~~~~~~~~~~~i~Rp~~i~G~~~~~~---~~~~~~~-----~~-~~~~-~---~~~~~~~~~~i~v~Dva~~~  265 (355)
                      ........+..++|..++.+-|.++|||.++..   +..+|.+     .+ ..+. +   +|.|...|.|+|.+|+|+++
T Consensus       142 ~idv~n~aY~~qhg~~~tsviPtNvfGphDNfnpe~sHVlPali~r~h~ak~~gtd~~~VwGsG~PlRqFiys~DLA~l~  221 (315)
T KOG1431|consen  142 MIDVQNQAYRQQHGRDYTSVIPTNVFGPHDNFNPENSHVLPALIHRFHEAKRNGTDELTVWGSGSPLRQFIYSDDLADLF  221 (315)
T ss_pred             HHHHHHHHHHHHhCCceeeeccccccCCCCCCCcccccchHHHHHHHHHHHhcCCceEEEecCCChHHHHhhHhHHHHHH
Confidence            777777888888999999999999999987532   2333332     11 2222 2   38899999999999999999


Q ss_pred             HHHHhCCCCCCceEecCCC--ccCHHHHHHHHHHHhCCCCCCCCcHHHHHHHhcccceeeecCccccchhHHhCCCCCCc
Q 018503          266 YEALSNPSYRGVINGTAPN--PVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPFKY  343 (355)
Q Consensus       266 ~~~~~~~~~~~~~~i~~~~--~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~lG~~p~~  343 (355)
                      ++++.+-..-+-.+++.|+  .+|++|+++++.++++....+....-.     .+    -.-.+-++++|++.+||.|++
T Consensus       222 i~vlr~Y~~vEpiils~ge~~EVtI~e~aeaV~ea~~F~G~l~~DttK-----~D----Gq~kKtasnsKL~sl~pd~~f  292 (315)
T KOG1431|consen  222 IWVLREYEGVEPIILSVGESDEVTIREAAEAVVEAVDFTGKLVWDTTK-----SD----GQFKKTASNSKLRSLLPDFKF  292 (315)
T ss_pred             HHHHHhhcCccceEeccCccceeEHHHHHHHHHHHhCCCceEEeeccC-----CC----CCcccccchHHHHHhCCCccc
Confidence            9999986655567788777  899999999999999976433322111     11    112345778899999999999


Q ss_pred             cCHHHHHHHHhC
Q 018503          344 RYVKDALKAIMS  355 (355)
Q Consensus       344 ~~~~~~l~~~~~  355 (355)
                      ++++++|.++++
T Consensus       293 t~l~~ai~~t~~  304 (315)
T KOG1431|consen  293 TPLEQAISETVQ  304 (315)
T ss_pred             ChHHHHHHHHHH
Confidence            999999998763

>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor

Probab=99.97  E-value=2.6e-31  Score=227.51  Aligned_cols=223  Identities=28%  Similarity=0.393  Sum_probs=176.9

Q ss_pred             EEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcCC--CcEEEECCCCCCCC
Q 018503           53 VSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQG--STAVVNLAGTPIGT  130 (355)
Q Consensus        53 IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~--~d~vi~~a~~~~~~  130 (355)
                      |||||||||||++++++|+++|++|+++.|+........... ...+..+|+.|.+.+.+++++  +|+|||+|+.... 
T Consensus         1 IlI~GatG~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~-~~~~~~~dl~~~~~~~~~~~~~~~d~vi~~a~~~~~-   78 (236)
T PF01370_consen    1 ILITGATGFIGSALVRQLLKKGHEVIVLSRSSNSESFEEKKL-NVEFVIGDLTDKEQLEKLLEKANIDVVIHLAAFSSN-   78 (236)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTTEEEEEESCSTGGHHHHHHT-TEEEEESETTSHHHHHHHHHHHTESEEEEEBSSSSH-
T ss_pred             EEEEccCCHHHHHHHHHHHHcCCccccccccccccccccccc-eEEEEEeeccccccccccccccCceEEEEeeccccc-
Confidence            799999999999999999999999999999887653221100 001445799999999999975  5999999986421 


Q ss_pred             CCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCCCCccccCCCCC--CChh-HHHHHHHHHHHHh
Q 018503          131 RWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPS--GNDY-LAEVCREWEGTAL  207 (355)
Q Consensus       131 ~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~--~~~y-~~k~~~~~~~~~~  207 (355)
                      ..........++.|+.++.++++++.+  .+++++||+||..+  |+.....+++|+.+.  ...| .+|...|.....+
T Consensus        79 ~~~~~~~~~~~~~n~~~~~~ll~~~~~--~~~~~~i~~sS~~~--y~~~~~~~~~e~~~~~~~~~Y~~~K~~~e~~~~~~  154 (236)
T PF01370_consen   79 PESFEDPEEIIEANVQGTRNLLEAARE--AGVKRFIFLSSASV--YGDPDGEPIDEDSPINPLSPYGASKRAAEELLRDY  154 (236)
T ss_dssp             HHHHHSHHHHHHHHHHHHHHHHHHHHH--HTTSEEEEEEEGGG--GTSSSSSSBETTSGCCHSSHHHHHHHHHHHHHHHH
T ss_pred             ccccccccccccccccccccccccccc--cccccccccccccc--ccccccccccccccccccccccccccccccccccc
Confidence            112255678889999999999999999  68899999999988  998877788888765  3457 7788888888777


Q ss_pred             ccCCCCeEEEEEecEEEeCC--CCcccchHHHH--HHHhCCCC---CCCCcceecccHHHHHHHHHHHHhCCC-CCCceE
Q 018503          208 KVNKDVRLALIRIGIVLGKD--GGALAKMIPLF--MMFAGGPL---GSGQQWFSWIHLDDIVNLIYEALSNPS-YRGVIN  279 (355)
Q Consensus       208 ~~~~~~~~~i~Rp~~i~G~~--~~~~~~~~~~~--~~~~~~~~---~~~~~~~~~i~v~Dva~~~~~~~~~~~-~~~~~~  279 (355)
                      ....+++++++||+.+||+.  ......+++.+  +...++++   +++++.++++|++|+|++++.+++++. .+++||
T Consensus       155 ~~~~~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~yN  234 (236)
T PF01370_consen  155 AKKYGLRVTILRPPNVYGPGNPNNNSSSFLPSLIRQALKGKPIKIPGDGSQVRDFIHVDDLAEAIVAALENPKAAGGIYN  234 (236)
T ss_dssp             HHHHTSEEEEEEESEEESTTSSSSSTSSHHHHHHHHHHTTSSEEEESTSSCEEEEEEHHHHHHHHHHHHHHSCTTTEEEE
T ss_pred             ccccccccccccccccccccccccccccccchhhHHhhcCCcccccCCCCCccceEEHHHHHHHHHHHHhCCCCCCCEEE
Confidence            77779999999999999998  12223344433  45566643   788999999999999999999999988 678999


Q ss_pred             ec
Q 018503          280 GT  281 (355)
Q Consensus       280 i~  281 (355)
                      ++
T Consensus       235 ig  236 (236)
T PF01370_consen  235 IG  236 (236)
T ss_dssp             ES
T ss_pred             eC
Confidence            86

The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....

>KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism]

Probab=99.97  E-value=4.2e-30  Score=224.28  Aligned_cols=298  Identities=20%  Similarity=0.227  Sum_probs=214.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCC--CeEEEEecCCchhhccCCC----CCCccCCCeeecCCcchhhhcCCCcEEEE
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADN--HQVRVLTRSRSKAELIFPG----KKTRFFPGVMIAEEPQWRDCIQGSTAVVN  122 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~----~~~~~~~~~d~~~~~~~~~~~~~~d~vi~  122 (355)
                      .+.+++||||+||+|+||+++|++.+  .+|++++..+.........    ........+|+.|...+.+++.++ .|+|
T Consensus         3 ~~~~vlVtGG~GflG~hlv~~L~~~~~~~~irv~D~~~~~~~~~~e~~~~~~~~v~~~~~D~~~~~~i~~a~~~~-~Vvh   81 (361)
T KOG1430|consen    3 KKLSVLVTGGSGFLGQHLVQALLENELKLEIRVVDKTPTQSNLPAELTGFRSGRVTVILGDLLDANSISNAFQGA-VVVH   81 (361)
T ss_pred             cCCEEEEECCccHHHHHHHHHHHhcccccEEEEeccCccccccchhhhcccCCceeEEecchhhhhhhhhhccCc-eEEE
Confidence            34689999999999999999999987  8999999977532111110    010113457888999999999999 8888


Q ss_pred             CCCCCCCCCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCCCCccccCCCCC--C--Chh-HHH
Q 018503          123 LAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPS--G--NDY-LAE  197 (355)
Q Consensus       123 ~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~--~--~~y-~~k  197 (355)
                      ||+.. .......+.+..+++|+.||.+++++|.+  .+++++||+||..|.+.|.. ....+|+.|.  .  ..| .+|
T Consensus        82 ~aa~~-~~~~~~~~~~~~~~vNV~gT~nvi~~c~~--~~v~~lIYtSs~~Vvf~g~~-~~n~~E~~p~p~~~~d~Y~~sK  157 (361)
T KOG1430|consen   82 CAASP-VPDFVENDRDLAMRVNVNGTLNVIEACKE--LGVKRLIYTSSAYVVFGGEP-IINGDESLPYPLKHIDPYGESK  157 (361)
T ss_pred             ecccc-CccccccchhhheeecchhHHHHHHHHHH--hCCCEEEEecCceEEeCCee-cccCCCCCCCccccccccchHH
Confidence            88865 33445556788999999999999999999  89999999999999643322 2334444432  1  345 666


Q ss_pred             HHHHHHHHHhccCCCCeEEEEEecEEEeCCCCcccchHHHHHH-HhCCCC---CCCCcceecccHHHHHHHHHHHHh---
Q 018503          198 VCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMM-FAGGPL---GSGQQWFSWIHLDDIVNLIYEALS---  270 (355)
Q Consensus       198 ~~~~~~~~~~~~~~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~-~~~~~~---~~~~~~~~~i~v~Dva~~~~~~~~---  270 (355)
                      ..+|..........++.++.+||..||||++....  .....+ ..++..   ++++...++++++.+|.+.+.+..   
T Consensus       158 a~aE~~Vl~an~~~~l~T~aLR~~~IYGpgd~~~~--~~i~~~~~~g~~~f~~g~~~~~~~~~~~~Nva~ahilA~~aL~  235 (361)
T KOG1430|consen  158 ALAEKLVLEANGSDDLYTCALRPPGIYGPGDKRLL--PKIVEALKNGGFLFKIGDGENLNDFTYGENVAWAHILAARALL  235 (361)
T ss_pred             HHHHHHHHHhcCCCCeeEEEEccccccCCCCcccc--HHHHHHHHccCceEEeeccccccceEEechhHHHHHHHHHHHH
Confidence            66666655555445799999999999999875542  222222 233332   667788899999999998888653   


Q ss_pred             -C-CC-CCCceEecCCCccCHHHHHHHHHHHhCCCCC--CCCcHHHHHHH----------hc--cc------ceeeecCc
Q 018503          271 -N-PS-YRGVINGTAPNPVRLAEMCDHLGNVLGRPSW--LPVPEFALKAV----------LG--EG------AFVVLEGQ  327 (355)
Q Consensus       271 -~-~~-~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~--~~~~~~~~~~~----------~~--~~------~~~~~~~~  327 (355)
                       + +. .++.|+|.+++++...+++..+.+.+|....  +..|.+.....          ++  .+      .+......
T Consensus       236 ~~~~~~~Gq~yfI~d~~p~~~~~~~~~l~~~lg~~~~~~~~~p~~l~~~~~~l~e~~~~~l~p~~p~lt~~~v~~~~~~~  315 (361)
T KOG1430|consen  236 DKSPSVNGQFYFITDDTPVRFFDFLSPLVKALGYCLPSSIKLPLFLSYFLAYLLEIVYFLLRPYQPILTRFRVALLGVTR  315 (361)
T ss_pred             hcCCccCceEEEEeCCCcchhhHHHHHHHHhcCCCCCceeecchHHHHHHHHHHHHHHHhccCCCCCcChhheeeecccc
Confidence             2 22 4559999999999888888899999998843  56665444321          11  11      12233466


Q ss_pred             cccchhHH-hCCCCCCccCHHHHHHHHh
Q 018503          328 RVVPARAK-ELGFPFKYRYVKDALKAIM  354 (355)
Q Consensus       328 ~~~~~k~~-~lG~~p~~~~~~~~l~~~~  354 (355)
                      .++..|++ ++||.|..+ +++++++++
T Consensus       316 ~f~~~kA~~~lgY~P~~~-~~e~~~~~~  342 (361)
T KOG1430|consen  316 TFSIEKAKRELGYKPLVS-LEEAIQRTI  342 (361)
T ss_pred             ccCHHHHHHhhCCCCcCC-HHHHHHHHH
Confidence            67788994 699999997 999999876

>PRK05865 hypothetical protein; Provisional

Probab=99.97  E-value=5.5e-30  Score=247.84  Aligned_cols=248  Identities=21%  Similarity=0.277  Sum_probs=178.9

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcCCCcEEEECCCCCCCC
Q 018503           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTPIGT  130 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~~~~~  130 (355)
                      |+|+||||+||||++++++|+++||+|++++|+......  ...   .+...|+.|.+.+.++++++|+|||+|+...  
T Consensus         1 MkILVTGATGfIGs~La~~Ll~~G~~Vv~l~R~~~~~~~--~~v---~~v~gDL~D~~~l~~al~~vD~VVHlAa~~~--   73 (854)
T PRK05865          1 MRIAVTGASGVLGRGLTARLLSQGHEVVGIARHRPDSWP--SSA---DFIAADIRDATAVESAMTGADVVAHCAWVRG--   73 (854)
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCchhhcc--cCc---eEEEeeCCCHHHHHHHHhCCCEEEECCCccc--
Confidence            689999999999999999999999999999997533211  111   1445799999999999999999999998531  


Q ss_pred             CCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCChhHHHHHHHHHHHHhccC
Q 018503          131 RWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDYLAEVCREWEGTALKVN  210 (355)
Q Consensus       131 ~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~~y~~k~~~~~~~~~~~~~  210 (355)
                              ..+++|+.++.++++++++  .+++++||+||..                        |...|.+.    ..
T Consensus        74 --------~~~~vNv~GT~nLLeAa~~--~gvkr~V~iSS~~------------------------K~aaE~ll----~~  115 (854)
T PRK05865         74 --------RNDHINIDGTANVLKAMAE--TGTGRIVFTSSGH------------------------QPRVEQML----AD  115 (854)
T ss_pred             --------chHHHHHHHHHHHHHHHHH--cCCCeEEEECCcH------------------------HHHHHHHH----HH
Confidence                    1457899999999999998  7888999999842                        33333322    23


Q ss_pred             CCCeEEEEEecEEEeCCCCcccchHHHHHHHhCCCC--CCCCcceecccHHHHHHHHHHHHhCCC-CCCceEecCCCccC
Q 018503          211 KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPL--GSGQQWFSWIHLDDIVNLIYEALSNPS-YRGVINGTAPNPVR  287 (355)
Q Consensus       211 ~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~i~v~Dva~~~~~~~~~~~-~~~~~~i~~~~~~s  287 (355)
                      ++++++++||+++||++...   ++..+  .....+  +.++..++|+|++|+|++++.++..+. .+++||+++++++|
T Consensus       116 ~gl~~vILRp~~VYGP~~~~---~i~~l--l~~~v~~~G~~~~~~dfIhVdDVA~Ai~~aL~~~~~~ggvyNIgsg~~~S  190 (854)
T PRK05865        116 CGLEWVAVRCALIFGRNVDN---WVQRL--FALPVLPAGYADRVVQVVHSDDAQRLLVRALLDTVIDSGPVNLAAPGELT  190 (854)
T ss_pred             cCCCEEEEEeceEeCCChHH---HHHHH--hcCceeccCCCCceEeeeeHHHHHHHHHHHHhCCCcCCCeEEEECCCccc
Confidence            58999999999999996321   22111  111112  445567899999999999999987543 46799999999999


Q ss_pred             HHHHHHHHHHHhCCCCCCCCcHHHHHHHhcccc--eeeecCccccchhHHh-CCCCCCccCHHHHHHHHhC
Q 018503          288 LAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGA--FVVLEGQRVVPARAKE-LGFPFKYRYVKDALKAIMS  355 (355)
Q Consensus       288 ~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~k~~~-lG~~p~~~~~~~~l~~~~~  355 (355)
                      +.|+++.+.+...     +++.+... ..++..  ........++++|+++ +||+|+++ ++++|+++++
T Consensus       191 i~EIae~l~~~~~-----~v~~~~~~-~~~~~~~~~~~~~~~~~D~sKar~~LGw~P~~s-LeeGL~dti~  254 (854)
T PRK05865        191 FRRIAAALGRPMV-----PIGSPVLR-RVTSFAELELLHSAPLMDVTLLRDRWGFQPAWN-AEECLEDFTL  254 (854)
T ss_pred             HHHHHHHHhhhhc-----cCCchhhh-hccchhhhhcccCCccCCHHHHHHHhCCCCCCC-HHHHHHHHHH
Confidence            9999999887542     11111111 011110  1111233578888964 99999996 9999999863

>PLN02778 3,5-epimerase/4-reductase

Probab=99.97  E-value=1.2e-28  Score=217.21  Aligned_cols=264  Identities=16%  Similarity=0.157  Sum_probs=180.3

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcC--CCcEEEECCC
Q 018503           48 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ--GSTAVVNLAG  125 (355)
Q Consensus        48 ~~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--~~d~vi~~a~  125 (355)
                      .+.||||||||+||||++|++.|+++|++|+...+                    ++.+.+.+...+.  ++|+|||+||
T Consensus         7 ~~~~kiLVtG~tGfiG~~l~~~L~~~g~~V~~~~~--------------------~~~~~~~v~~~l~~~~~D~ViH~Aa   66 (298)
T PLN02778          7 SATLKFLIYGKTGWIGGLLGKLCQEQGIDFHYGSG--------------------RLENRASLEADIDAVKPTHVFNAAG   66 (298)
T ss_pred             CCCCeEEEECCCCHHHHHHHHHHHhCCCEEEEecC--------------------ccCCHHHHHHHHHhcCCCEEEECCc
Confidence            34589999999999999999999999999975321                    2223344444444  6899999999


Q ss_pred             CCCC--CCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCCC------CccccCCCCCC---Chh
Q 018503          126 TPIG--TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSE------TEVFDESSPSG---NDY  194 (355)
Q Consensus       126 ~~~~--~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~------~~~~~e~~~~~---~~y  194 (355)
                      ....  ..+...++...+++|+.++.+|+++|++  .+++ ++++||+++  |+...      +.+++|++++.   +.|
T Consensus        67 ~~~~~~~~~~~~~p~~~~~~Nv~gt~~ll~aa~~--~gv~-~v~~sS~~v--y~~~~~~p~~~~~~~~Ee~~p~~~~s~Y  141 (298)
T PLN02778         67 VTGRPNVDWCESHKVETIRANVVGTLTLADVCRE--RGLV-LTNYATGCI--FEYDDAHPLGSGIGFKEEDTPNFTGSFY  141 (298)
T ss_pred             ccCCCCchhhhhCHHHHHHHHHHHHHHHHHHHHH--hCCC-EEEEecceE--eCCCCCCCcccCCCCCcCCCCCCCCCch
Confidence            7543  2345567889999999999999999999  6775 667788887  65321      22466665442   457


Q ss_pred             -HHHHHHHHHHHHhccCCCCeEEEEEecEEEeCCCCcccchHHHHHHHhCCCCCCCCcceecccHHHHHHHHHHHHhCCC
Q 018503          195 -LAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPS  273 (355)
Q Consensus       195 -~~k~~~~~~~~~~~~~~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~  273 (355)
                       .+|...|.....+.     +..++|+...+|++......++.  ....+..+.  ....+++|++|++++++.++..+.
T Consensus       142 g~sK~~~E~~~~~y~-----~~~~lr~~~~~~~~~~~~~~fi~--~~~~~~~~~--~~~~s~~yv~D~v~al~~~l~~~~  212 (298)
T PLN02778        142 SKTKAMVEELLKNYE-----NVCTLRVRMPISSDLSNPRNFIT--KITRYEKVV--NIPNSMTILDELLPISIEMAKRNL  212 (298)
T ss_pred             HHHHHHHHHHHHHhh-----ccEEeeecccCCcccccHHHHHH--HHHcCCCee--EcCCCCEEHHHHHHHHHHHHhCCC
Confidence             77877777766543     45788888777765322222322  333343321  011379999999999999997654


Q ss_pred             CCCceEecCCCccCHHHHHHHHHHHhCCC---CCCCCcHHHHHHHhcccceeeecCccccchhHHh-CCCCCCccCHHHH
Q 018503          274 YRGVINGTAPNPVRLAEMCDHLGNVLGRP---SWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKE-LGFPFKYRYVKDA  349 (355)
Q Consensus       274 ~~~~~~i~~~~~~s~~el~~~i~~~~g~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~-lG~~p~~~~~~~~  349 (355)
                       .|+||+++++++|+.|+++.+++.+|.+   ..+.+++.......      ..++..++.+|+++ ++-.+.  ..+++
T Consensus       213 -~g~yNigs~~~iS~~el~~~i~~~~~~~~~~~~~~i~~~~~~~~~------~~~~~~Ld~~k~~~~~~~~~~--~~~~~  283 (298)
T PLN02778        213 -TGIYNFTNPGVVSHNEILEMYRDYIDPSFTWKNFTLEEQAKVIVA------PRSNNELDTTKLKREFPELLP--IKESL  283 (298)
T ss_pred             -CCeEEeCCCCcccHHHHHHHHHHHhCCCceeccccHHHHHHHHhC------CCccccccHHHHHHhcccccc--hHHHH
Confidence             5799999999999999999999999964   22333322111111      11334688888866 454444  47888


Q ss_pred             HHHHh
Q 018503          350 LKAIM  354 (355)
Q Consensus       350 l~~~~  354 (355)
                      ++..+
T Consensus       284 ~~~~~  288 (298)
T PLN02778        284 IKYVF  288 (298)
T ss_pred             HHHHH
Confidence            87765

>KOG3019 consensus Predicted nucleoside-diphosphate sugar epimerase [Nucleotide transport and metabolism]

Probab=99.97  E-value=1.5e-28  Score=194.98  Aligned_cols=291  Identities=58%  Similarity=0.948  Sum_probs=242.3

Q ss_pred             EEEEEcCCchHHHHHHH-----HHHhCC----CeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcCCCcEEEE
Q 018503           52 TVSVTGATGFIGRRLVQ-----RLQADN----HQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVN  122 (355)
Q Consensus        52 ~IlVtGatG~iG~~l~~-----~L~~~g----~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~  122 (355)
                      +.++-+++|+|+..|..     ++-+.+    |+|++++|++.+.+.......   +.++-+       ...+++..+.+
T Consensus        14 ~a~~~~~~g~i~~nl~~~~~~~H~t~~~~a~~h~vtv~sR~pg~~ritw~el~---~~Gip~-------sc~a~vna~g~   83 (315)
T KOG3019|consen   14 DAVSNWSNGIIRENLGSETSCCHDTNVHSADNHAVTVLSRSPGKARITWPELD---FPGIPI-------SCVAGVNAVGN   83 (315)
T ss_pred             cCCCCccccchhccccCcccccccCCCCcccccceEEEecCCCCcccccchhc---CCCCce-------ehHHHHhhhhh
Confidence            45667889999988887     444434    999999999877543222211   111100       11123444555


Q ss_pred             CCCCCCCCCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCCCCccccCCCCCC-ChhHHHHHHH
Q 018503          123 LAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSG-NDYLAEVCRE  201 (355)
Q Consensus       123 ~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~-~~y~~k~~~~  201 (355)
                      ++..+ ..+|++....++....++.++.|.+++.+.....+.+|++|..++  |-......++|+.+.. -.|.++++.+
T Consensus        84 n~l~P-~rRWsp~fqkev~gSRi~~t~~la~aI~~aPq~~~~~Vlv~gva~--y~pS~s~eY~e~~~~qgfd~~srL~l~  160 (315)
T KOG3019|consen   84 NALLP-IRRWSPEFQKEVKGSRIRVTSKLADAINNAPQEARPTVLVSGVAV--YVPSESQEYSEKIVHQGFDILSRLCLE  160 (315)
T ss_pred             hccCc-hhhcCHHHHHHhhcceeeHHHHHHHHHhcCCCCCCCeEEEEeeEE--eccccccccccccccCChHHHHHHHHH
Confidence            55544 358999999999999999999999999986445668999999888  8877788888888754 3458888999


Q ss_pred             HHHHHhccCCCCeEEEEEecEEEeCCCCcccchHHHHHHHhCCCCCCCCcceecccHHHHHHHHHHHHhCCCCCCceEec
Q 018503          202 WEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRGVINGT  281 (355)
Q Consensus       202 ~~~~~~~~~~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~~~~~~i~  281 (355)
                      ++..........+.+++|.|.|.|.+.+....++.-+++..|+|++.|+++++|||++|++..+..+++++...|+.|-.
T Consensus       161 WE~aA~~~~~~~r~~~iR~GvVlG~gGGa~~~M~lpF~~g~GGPlGsG~Q~fpWIHv~DL~~li~~ale~~~v~GViNgv  240 (315)
T KOG3019|consen  161 WEGAALKANKDVRVALIRIGVVLGKGGGALAMMILPFQMGAGGPLGSGQQWFPWIHVDDLVNLIYEALENPSVKGVINGV  240 (315)
T ss_pred             HHHHhhccCcceeEEEEEEeEEEecCCcchhhhhhhhhhccCCcCCCCCeeeeeeehHHHHHHHHHHHhcCCCCceeccc
Confidence            99888877778999999999999999999888888889999999999999999999999999999999999888999999


Q ss_pred             CCCccCHHHHHHHHHHHhCCCCCCCCcHHHHHHHhc-ccceeeecCccccchhHHhCCCCCCccCHHHHHHHHhC
Q 018503          282 APNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLG-EGAFVVLEGQRVVPARAKELGFPFKYRYVKDALKAIMS  355 (355)
Q Consensus       282 ~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~k~~~lG~~p~~~~~~~~l~~~~~  355 (355)
                      .+++++..|+.+.++++++++..+++|++...+.++ +.....+..+++.+.|+.++||+++|+++.++|++++.
T Consensus       241 AP~~~~n~Ef~q~lg~aL~Rp~~~pvP~fvvqA~fG~erA~~vLeGqKV~Pqral~~Gf~f~yp~vk~Al~~i~~  315 (315)
T KOG3019|consen  241 APNPVRNGEFCQQLGSALSRPSWLPVPDFVVQALFGPERATVVLEGQKVLPQRALELGFEFKYPYVKDALRAIMQ  315 (315)
T ss_pred             CCCccchHHHHHHHHHHhCCCcccCCcHHHHHHHhCccceeEEeeCCcccchhHhhcCceeechHHHHHHHHHhC
Confidence            999999999999999999999999999999999998 77888999999999999999999999999999998763

>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase

Probab=99.96  E-value=4.8e-28  Score=220.71  Aligned_cols=238  Identities=21%  Similarity=0.251  Sum_probs=173.4

Q ss_pred             ccCCCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhc------cCCCCCCccCCCeeecCCcchhhhcC----
Q 018503           46 QKASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAEL------IFPGKKTRFFPGVMIAEEPQWRDCIQ----  115 (355)
Q Consensus        46 ~~~~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~------~~~~~~~~~~~~~d~~~~~~~~~~~~----  115 (355)
                      .+..+|+||||||||+||++++++|+++|++|++++|+..+...      ............+|+.|++.+.++++    
T Consensus        56 ~~~~~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~~~~~~~~~  135 (390)
T PLN02657         56 KEPKDVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTDADSLRKVLFSEGD  135 (390)
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEechhhccccchhhHHhhhcCCceEEEeeCCCHHHHHHHHHHhCC
Confidence            34556899999999999999999999999999999998754221      00000001144579999999998887    


Q ss_pred             CCcEEEECCCCCCCCCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCChh-
Q 018503          116 GSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-  194 (355)
Q Consensus       116 ~~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~~y-  194 (355)
                      ++|+||||++.....      ....+++|+.++.++++++++  .++++||++||.++  |+            +...| 
T Consensus       136 ~~D~Vi~~aa~~~~~------~~~~~~vn~~~~~~ll~aa~~--~gv~r~V~iSS~~v--~~------------p~~~~~  193 (390)
T PLN02657        136 PVDVVVSCLASRTGG------VKDSWKIDYQATKNSLDAGRE--VGAKHFVLLSAICV--QK------------PLLEFQ  193 (390)
T ss_pred             CCcEEEECCccCCCC------CccchhhHHHHHHHHHHHHHH--cCCCEEEEEeeccc--cC------------cchHHH
Confidence            599999998743111      123456889999999999998  78999999999876  43            12234 


Q ss_pred             HHHHHHHHHHHHhccCCCCeEEEEEecEEEeCCCCcccchHHHHHHHhCCCC---CCCCcce-ecccHHHHHHHHHHHHh
Q 018503          195 LAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPL---GSGQQWF-SWIHLDDIVNLIYEALS  270 (355)
Q Consensus       195 ~~k~~~~~~~~~~~~~~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~~~~~~---~~~~~~~-~~i~v~Dva~~~~~~~~  270 (355)
                      ..|...|.+...  ...+++++++||+.+||+..    .++.  ....+.++   ++++..+ ++||++|+|++++.++.
T Consensus       194 ~sK~~~E~~l~~--~~~gl~~tIlRp~~~~~~~~----~~~~--~~~~g~~~~~~GdG~~~~~~~I~v~DlA~~i~~~~~  265 (390)
T PLN02657        194 RAKLKFEAELQA--LDSDFTYSIVRPTAFFKSLG----GQVE--IVKDGGPYVMFGDGKLCACKPISEADLASFIADCVL  265 (390)
T ss_pred             HHHHHHHHHHHh--ccCCCCEEEEccHHHhcccH----HHHH--hhccCCceEEecCCcccccCceeHHHHHHHHHHHHh
Confidence            556555544433  34689999999999997531    1111  22344443   6666544 57999999999999997


Q ss_pred             CCC-CCCceEecCC-CccCHHHHHHHHHHHhCCC-CCCCCcHHHHH
Q 018503          271 NPS-YRGVINGTAP-NPVRLAEMCDHLGNVLGRP-SWLPVPEFALK  313 (355)
Q Consensus       271 ~~~-~~~~~~i~~~-~~~s~~el~~~i~~~~g~~-~~~~~~~~~~~  313 (355)
                      ++. .+++||++++ +.+|+.|+++.+.+.+|++ ....+|.+...
T Consensus       266 ~~~~~~~~~~Iggp~~~~S~~Eia~~l~~~lG~~~~~~~vp~~~~~  311 (390)
T PLN02657        266 DESKINKVLPIGGPGKALTPLEQGEMLFRILGKEPKFFKVPIQIMD  311 (390)
T ss_pred             CccccCCEEEcCCCCcccCHHHHHHHHHHHhCCCCceEEcCHHHHH
Confidence            654 4679999985 6899999999999999987 44567766655

>PLN02996 fatty acyl-CoA reductase

Probab=99.96  E-value=4.3e-28  Score=226.45  Aligned_cols=246  Identities=18%  Similarity=0.182  Sum_probs=176.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCC---CeEEEEecCCchhh-------ccCCCC------------------CCccCC
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADN---HQVRVLTRSRSKAE-------LIFPGK------------------KTRFFP  100 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g---~~V~~~~r~~~~~~-------~~~~~~------------------~~~~~~  100 (355)
                      ..++|||||||||+|++|++.|++.+   .+|+++.|..+...       ......                  ......
T Consensus        10 ~~k~VlvTGaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~~kv~~i   89 (491)
T PLN02996         10 ENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLISEKVTPV   89 (491)
T ss_pred             CCCeEEEeCCCcHHHHHHHHHHHhhCCCCCEEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhhhhcCEEEE
Confidence            45789999999999999999999864   37899999765311       100000                  000122


Q ss_pred             Ceeec-------CCcchhhhcCCCcEEEECCCCCCCCCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeee
Q 018503          101 GVMIA-------EEPQWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATAL  173 (355)
Q Consensus       101 ~~d~~-------~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~  173 (355)
                      ..|+.       +.+.+.++++++|+|||+|+...   + ..++....++|+.++.+++++++.+ .+++++||+||+++
T Consensus        90 ~GDl~~~~LGLs~~~~~~~l~~~vD~ViH~AA~v~---~-~~~~~~~~~~Nv~gt~~ll~~a~~~-~~~k~~V~vST~~v  164 (491)
T PLN02996         90 PGDISYDDLGVKDSNLREEMWKEIDIVVNLAATTN---F-DERYDVALGINTLGALNVLNFAKKC-VKVKMLLHVSTAYV  164 (491)
T ss_pred             ecccCCcCCCCChHHHHHHHHhCCCEEEECccccC---C-cCCHHHHHHHHHHHHHHHHHHHHhc-CCCCeEEEEeeeEE
Confidence            34554       33446677889999999999642   1 2346778899999999999999873 36789999999999


Q ss_pred             eeeCCCCC----ccccCC-------------------------------------------------CCCCChh-HHHHH
Q 018503          174 GYYGTSET----EVFDES-------------------------------------------------SPSGNDY-LAEVC  199 (355)
Q Consensus       174 ~~yg~~~~----~~~~e~-------------------------------------------------~~~~~~y-~~k~~  199 (355)
                        ||...+    .++.+.                                                 ....+.| .+|..
T Consensus       165 --yG~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pn~Y~~TK~~  242 (491)
T PLN02996        165 --CGEKSGLILEKPFHMGETLNGNRKLDINEEKKLVKEKLKELNEQDASEEEITQAMKDLGMERAKLHGWPNTYVFTKAM  242 (491)
T ss_pred             --ecCCCceeeeecCCCcccccccccCChHHHHHHHHHHHHHHHhhcCCHHHHHHHhhhhchhHHHhCCCCCchHhhHHH
Confidence              985432    111100                                                 0012458 88888


Q ss_pred             HHHHHHHhccCCCCeEEEEEecEEEeCCCCcccchHHH-------H-HHHhCCC---CCCCCcceecccHHHHHHHHHHH
Q 018503          200 REWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPL-------F-MMFAGGP---LGSGQQWFSWIHLDDIVNLIYEA  268 (355)
Q Consensus       200 ~~~~~~~~~~~~~~~~~i~Rp~~i~G~~~~~~~~~~~~-------~-~~~~~~~---~~~~~~~~~~i~v~Dva~~~~~~  268 (355)
                      .|.+...+.  .+++++++||++|+|+...+...++..       + ....|..   ++++++.+|++||+|+|++++.+
T Consensus       243 aE~lv~~~~--~~lpv~i~RP~~V~G~~~~p~~gwi~~~~~~~~i~~~~~~g~~~~~~gdg~~~~D~v~Vddvv~a~l~a  320 (491)
T PLN02996        243 GEMLLGNFK--ENLPLVIIRPTMITSTYKEPFPGWIEGLRTIDSVIVGYGKGKLTCFLADPNSVLDVIPADMVVNAMIVA  320 (491)
T ss_pred             HHHHHHHhc--CCCCEEEECCCEeccCCcCCCCCcccchhhHHHHHHHhccceEeEEecCCCeecceecccHHHHHHHHH
Confidence            888886654  389999999999999876554443321       1 2233433   37889999999999999999999


Q ss_pred             HhCC----CCCCceEecCC--CccCHHHHHHHHHHHhCCCC
Q 018503          269 LSNP----SYRGVINGTAP--NPVRLAEMCDHLGNVLGRPS  303 (355)
Q Consensus       269 ~~~~----~~~~~~~i~~~--~~~s~~el~~~i~~~~g~~~  303 (355)
                      +.+.    ..+++||++++  +++|+.|+++.+.+.++..+
T Consensus       321 ~~~~~~~~~~~~vYNi~s~~~~~~s~~ei~~~~~~~~~~~p  361 (491)
T PLN02996        321 MAAHAGGQGSEIIYHVGSSLKNPVKFSNLHDFAYRYFSKNP  361 (491)
T ss_pred             HHHhhccCCCCcEEEecCCCCCcccHHHHHHHHHHHhhhCC
Confidence            8753    13458999998  89999999999999988653

>PRK07201 short chain dehydrogenase; Provisional

Probab=99.96  E-value=3.4e-27  Score=231.08  Aligned_cols=250  Identities=22%  Similarity=0.240  Sum_probs=173.7

Q ss_pred             CEEEEEcCCchHHHHHHHHHH--hCCCeEEEEecCCchhh--ccCCC-C-CCccCCCeeecCC------cchhhhcCCCc
Q 018503           51 MTVSVTGATGFIGRRLVQRLQ--ADNHQVRVLTRSRSKAE--LIFPG-K-KTRFFPGVMIAEE------PQWRDCIQGST  118 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~--~~g~~V~~~~r~~~~~~--~~~~~-~-~~~~~~~~d~~~~------~~~~~~~~~~d  118 (355)
                      |+|||||||||||++|+++|+  +.|++|++++|+.....  .+... . ........|+.|+      +.+.++ +++|
T Consensus         1 m~ILVTGatGfIG~~lv~~Ll~~~~g~~V~~l~R~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~l-~~~D   79 (657)
T PRK07201          1 MRYFVTGGTGFIGRRLVSRLLDRRREATVHVLVRRQSLSRLEALAAYWGADRVVPLVGDLTEPGLGLSEADIAEL-GDID   79 (657)
T ss_pred             CeEEEeCCccHHHHHHHHHHHhcCCCCEEEEEECcchHHHHHHHHHhcCCCcEEEEecccCCccCCcCHHHHHHh-cCCC
Confidence            589999999999999999999  57999999999754321  11000 0 0001334577664      244454 8899


Q ss_pred             EEEECCCCCCCCCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCCCCccccCCC-----CCCCh
Q 018503          119 AVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESS-----PSGND  193 (355)
Q Consensus       119 ~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~-----~~~~~  193 (355)
                      +|||||+....    ........++|+.++.+++++|++  .++++|||+||.++  ||...+ +.+|+.     .+...
T Consensus        80 ~Vih~Aa~~~~----~~~~~~~~~~nv~gt~~ll~~a~~--~~~~~~v~~SS~~v--~g~~~~-~~~e~~~~~~~~~~~~  150 (657)
T PRK07201         80 HVVHLAAIYDL----TADEEAQRAANVDGTRNVVELAER--LQAATFHHVSSIAV--AGDYEG-VFREDDFDEGQGLPTP  150 (657)
T ss_pred             EEEECceeecC----CCCHHHHHHHHhHHHHHHHHHHHh--cCCCeEEEEecccc--ccCccC-ccccccchhhcCCCCc
Confidence            99999986422    123456778999999999999999  68899999999998  875432 334432     22345


Q ss_pred             h-HHHHHHHHHHHHhccCCCCeEEEEEecEEEeCCCCcc-c------chHHHHHHHhCC----C-CCCCCcceecccHHH
Q 018503          194 Y-LAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGAL-A------KMIPLFMMFAGG----P-LGSGQQWFSWIHLDD  260 (355)
Q Consensus       194 y-~~k~~~~~~~~~~~~~~~~~~~i~Rp~~i~G~~~~~~-~------~~~~~~~~~~~~----~-~~~~~~~~~~i~v~D  260 (355)
                      | .+|...|.....   ..+++++++||+.+||+..... .      .+...+......    + ++.+...++++|++|
T Consensus       151 Y~~sK~~~E~~~~~---~~g~~~~ilRp~~v~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~vdd  227 (657)
T PRK07201        151 YHRTKFEAEKLVRE---ECGLPWRVYRPAVVVGDSRTGEMDKIDGPYYFFKVLAKLAKLPSWLPMVGPDGGRTNIVPVDY  227 (657)
T ss_pred             hHHHHHHHHHHHHH---cCCCcEEEEcCCeeeecCCCCccccCCcHHHHHHHHHHhccCCcccccccCCCCeeeeeeHHH
Confidence            7 667666655432   3589999999999999854211 0      111222111111    1 134456789999999


Q ss_pred             HHHHHHHHHhCCC-CCCceEecCCCccCHHHHHHHHHHHhCCCC----CCCCcHHHHH
Q 018503          261 IVNLIYEALSNPS-YRGVINGTAPNPVRLAEMCDHLGNVLGRPS----WLPVPEFALK  313 (355)
Q Consensus       261 va~~~~~~~~~~~-~~~~~~i~~~~~~s~~el~~~i~~~~g~~~----~~~~~~~~~~  313 (355)
                      +|+++..++..+. .+++||+++++++++.|+++.+.+.+|.+.    ..++|.+...
T Consensus       228 va~ai~~~~~~~~~~g~~~ni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~p~~~~~  285 (657)
T PRK07201        228 VADALDHLMHKDGRDGQTFHLTDPKPQRVGDIYNAFARAAGAPPDARLFGFLPGFVAA  285 (657)
T ss_pred             HHHHHHHHhcCcCCCCCEEEeCCCCCCcHHHHHHHHHHHhCCCccccccccCChHHHH
Confidence            9999999988654 456999999999999999999999999865    2355655433

>COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]

Probab=99.95  E-value=9.9e-28  Score=196.96  Aligned_cols=300  Identities=16%  Similarity=0.133  Sum_probs=215.7

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhc----cCCCCCC----ccCCCeeecCCcchhhhcC--CCcE
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAEL----IFPGKKT----RFFPGVMIAEEPQWRDCIQ--GSTA  119 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~----~~~~~~~----~~~~~~d~~~~~~~~~~~~--~~d~  119 (355)
                      +++.||||-||+-|++|++.|+++||+|+++.|..+....    +......    ......|++|...+.++++  ++|-
T Consensus         2 ~K~ALITGITGQDGsYLa~lLLekGY~VhGi~Rrss~~n~~ri~L~~~~~~~~~~l~l~~gDLtD~~~l~r~l~~v~PdE   81 (345)
T COG1089           2 GKVALITGITGQDGSYLAELLLEKGYEVHGIKRRSSSFNTPRIHLYEDPHLNDPRLHLHYGDLTDSSNLLRILEEVQPDE   81 (345)
T ss_pred             CceEEEecccCCchHHHHHHHHhcCcEEEEEeeccccCCcccceeccccccCCceeEEEeccccchHHHHHHHHhcCchh
Confidence            4689999999999999999999999999999997543221    1111110    1133468889988888886  6899


Q ss_pred             EEECCCCCCCCCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCCCCccccCCCC--CCChh-HH
Q 018503          120 VVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSP--SGNDY-LA  196 (355)
Q Consensus       120 vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~--~~~~y-~~  196 (355)
                      |+|+|+.++. ..+-+.|....+++..|+.+|+++++.......||...||+..  ||.....|.+|..|  |.++| .+
T Consensus        82 IYNLaAQS~V-~vSFe~P~~T~~~~~iGtlrlLEaiR~~~~~~~rfYQAStSE~--fG~v~~~pq~E~TPFyPrSPYAvA  158 (345)
T COG1089          82 IYNLAAQSHV-GVSFEQPEYTADVDAIGTLRLLEAIRILGEKKTRFYQASTSEL--YGLVQEIPQKETTPFYPRSPYAVA  158 (345)
T ss_pred             heeccccccc-cccccCcceeeeechhHHHHHHHHHHHhCCcccEEEecccHHh--hcCcccCccccCCCCCCCCHHHHH
Confidence            9999998643 2234446677788999999999999984222346777788777  99888899999888  56789 99


Q ss_pred             HHHHHHHHHHhccCCCCeEEEEEecEEEeCCCC--cccchHHHH--HHHhCCC----CCCCCcceecccHHHHHHHHHHH
Q 018503          197 EVCREWEGTALKVNKDVRLALIRIGIVLGKDGG--ALAKMIPLF--MMFAGGP----LGSGQQWFSWIHLDDIVNLIYEA  268 (355)
Q Consensus       197 k~~~~~~~~~~~~~~~~~~~i~Rp~~i~G~~~~--~~~~~~~~~--~~~~~~~----~~~~~~~~~~i~v~Dva~~~~~~  268 (355)
                      |..+-++...++..+|+..|.=..++--+|..+  ...+-+...  ++..|..    +|+-++.|||-|+.|.++++..+
T Consensus       159 KlYa~W~tvNYResYgl~AcnGILFNHESP~Rge~FVTRKIt~ava~Ik~G~q~~l~lGNldAkRDWG~A~DYVe~mwlm  238 (345)
T COG1089         159 KLYAYWITVNYRESYGLFACNGILFNHESPLRGETFVTRKITRAVARIKLGLQDKLYLGNLDAKRDWGHAKDYVEAMWLM  238 (345)
T ss_pred             HHHHHheeeehHhhcCceeecceeecCCCCCCccceehHHHHHHHHHHHccccceEEeccccccccccchHHHHHHHHHH
Confidence            999999999999989999887666665566543  223322221  3333332    38889999999999999999999


Q ss_pred             HhCCCCCCceEecCCCccCHHHHHHHHHHHhCCCCCCC---CcHHHHHHHhcccceeee----------cCccccchhHH
Q 018503          269 LSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLP---VPEFALKAVLGEGAFVVL----------EGQRVVPARAK  335 (355)
Q Consensus       269 ~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~---~~~~~~~~~~~~~~~~~~----------~~~~~~~~k~~  335 (355)
                      ++++. ...|.+++|+..|++|+++...+..|.+..+.   ..+.-.....|+. ....          +.-.-+++|++
T Consensus       239 LQq~~-PddyViATg~t~sVrefv~~Af~~~g~~l~w~g~g~~e~g~da~~G~~-~V~idp~~fRPaEV~~Llgdp~KA~  316 (345)
T COG1089         239 LQQEE-PDDYVIATGETHSVREFVELAFEMVGIDLEWEGTGVDEKGVDAKTGKI-IVEIDPRYFRPAEVDLLLGDPTKAK  316 (345)
T ss_pred             HccCC-CCceEEecCceeeHHHHHHHHHHHcCceEEEeeccccccccccccCce-eEEECccccCchhhhhhcCCHHHHH
Confidence            99986 67999999999999999999999999652111   0000000000000 0000          11123457786


Q ss_pred             -hCCCCCCccCHHHHHHHHhC
Q 018503          336 -ELGFPFKYRYVKDALKAIMS  355 (355)
Q Consensus       336 -~lG~~p~~~~~~~~l~~~~~  355 (355)
                       +|||+|+++ ++|-++++++
T Consensus       317 ~~LGW~~~~~-~~elv~~Mv~  336 (345)
T COG1089         317 EKLGWRPEVS-LEELVREMVE  336 (345)
T ss_pred             HHcCCccccC-HHHHHHHHHH
Confidence             699999997 9999998763

>TIGR01746 Thioester-redct thioester reductase domain

Probab=99.94  E-value=1.6e-25  Score=204.29  Aligned_cols=252  Identities=20%  Similarity=0.265  Sum_probs=173.1

Q ss_pred             EEEEEcCCchHHHHHHHHHHhCC--CeEEEEecCCchhh---ccC--------CCC----CCccCCCeeecCC------c
Q 018503           52 TVSVTGATGFIGRRLVQRLQADN--HQVRVLTRSRSKAE---LIF--------PGK----KTRFFPGVMIAEE------P  108 (355)
Q Consensus        52 ~IlVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~---~~~--------~~~----~~~~~~~~d~~~~------~  108 (355)
                      +|+|||||||+|++|+++|+++|  ++|++++|+.+...   .+.        ...    ........|+.++      +
T Consensus         1 ~vlvtGatG~lG~~l~~~L~~~g~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~gl~~~   80 (367)
T TIGR01746         1 TVLLTGATGFLGAYLLEELLRRSTQAKVICLVRAASEEHAMERLREALRSYRLWQEDLARERIEVVAGDLSEPRLGLSDA   80 (367)
T ss_pred             CEEEeccchHHHHHHHHHHHhCCCCCEEEEEEccCCHHHHHHHHHHHHHHhCCCCchhhhCCEEEEeCCcCcccCCcCHH
Confidence            58999999999999999999998  67999999876321   000        000    0001223455433      3


Q ss_pred             chhhhcCCCcEEEECCCCCCCCCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCCCCccccCCC
Q 018503          109 QWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESS  188 (355)
Q Consensus       109 ~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~  188 (355)
                      .+..+.+++|+|||+|+...   + ......+.+.|+.++.++++++.+  .+.++++|+||.++  |+.....+..++.
T Consensus        81 ~~~~~~~~~d~vih~a~~~~---~-~~~~~~~~~~nv~g~~~ll~~a~~--~~~~~~v~iSS~~v--~~~~~~~~~~~~~  152 (367)
T TIGR01746        81 EWERLAENVDTIVHNGALVN---W-VYPYSELRAANVLGTREVLRLAAS--GRAKPLHYVSTISV--LAAIDLSTVTEDD  152 (367)
T ss_pred             HHHHHHhhCCEEEeCCcEec---c-CCcHHHHhhhhhHHHHHHHHHHhh--CCCceEEEEccccc--cCCcCCCCccccc
Confidence            45666778999999998642   1 123456778999999999999998  67888999999998  7653322222222


Q ss_pred             C-------CCChh-HHHHHHHHHHHHhccCCCCeEEEEEecEEEeCCC-Ccc--cchHHHH-H-HHhCCCCCCCC-ccee
Q 018503          189 P-------SGNDY-LAEVCREWEGTALKVNKDVRLALIRIGIVLGKDG-GAL--AKMIPLF-M-MFAGGPLGSGQ-QWFS  254 (355)
Q Consensus       189 ~-------~~~~y-~~k~~~~~~~~~~~~~~~~~~~i~Rp~~i~G~~~-~~~--~~~~~~~-~-~~~~~~~~~~~-~~~~  254 (355)
                      +       ....| .+|...|......... |++++++||+.++|+.. +..  ..+...+ . ......+.... ..++
T Consensus       153 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~-g~~~~i~Rpg~v~G~~~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~  231 (367)
T TIGR01746       153 AIVTPPPGLAGGYAQSKWVAELLVREASDR-GLPVTIVRPGRILGNSYTGAINSSDILWRMVKGCLALGAYPDSPELTED  231 (367)
T ss_pred             cccccccccCCChHHHHHHHHHHHHHHHhc-CCCEEEECCCceeecCCCCCCCchhHHHHHHHHHHHhCCCCCCCccccC
Confidence            1       12457 7787777766655443 89999999999999732 211  1222211 1 11222233333 3578


Q ss_pred             cccHHHHHHHHHHHHhCCCC---CCceEecCCCccCHHHHHHHHHHHhCCC-CCCCCcHHHHH
Q 018503          255 WIHLDDIVNLIYEALSNPSY---RGVINGTAPNPVRLAEMCDHLGNVLGRP-SWLPVPEFALK  313 (355)
Q Consensus       255 ~i~v~Dva~~~~~~~~~~~~---~~~~~i~~~~~~s~~el~~~i~~~~g~~-~~~~~~~~~~~  313 (355)
                      ++|++|+|++++.++..+..   +++||+++++++++.|+++.+.+ .|.+ ..++++.|...
T Consensus       232 ~~~vddva~ai~~~~~~~~~~~~~~~~~v~~~~~~s~~e~~~~i~~-~g~~~~~~~~~~w~~~  293 (367)
T TIGR01746       232 LTPVDYVARAIVALSSQPAASAGGPVFHVVNPEPVSLDEFLEWLER-AGYNLKLVSFDEWLQR  293 (367)
T ss_pred             cccHHHHHHHHHHHHhCCCcccCCceEEecCCCCCCHHHHHHHHHH-cCCCCCcCCHHHHHHH
Confidence            99999999999999987653   56999999999999999999999 8876 34456666544

It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.

>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family

Probab=99.94  E-value=6.7e-26  Score=199.43  Aligned_cols=256  Identities=20%  Similarity=0.187  Sum_probs=173.2

Q ss_pred             EEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhc------CC-CcEEEECC
Q 018503           52 TVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCI------QG-STAVVNLA  124 (355)
Q Consensus        52 ~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~------~~-~d~vi~~a  124 (355)
                      +|+||||||++|++++++|+++|++|++++|++++....  ...   ...+|+.|++++.+++      ++ +|.|+|++
T Consensus         1 ~ilVtGatG~iG~~vv~~L~~~g~~V~~~~R~~~~~~~~--~~~---~~~~d~~d~~~l~~a~~~~~~~~g~~d~v~~~~   75 (285)
T TIGR03649         1 TILLTGGTGKTASRIARLLQAASVPFLVASRSSSSSAGP--NEK---HVKFDWLDEDTWDNPFSSDDGMEPEISAVYLVA   75 (285)
T ss_pred             CEEEEcCCChHHHHHHHHHHhCCCcEEEEeCCCccccCC--CCc---cccccCCCHHHHHHHHhcccCcCCceeEEEEeC
Confidence            499999999999999999999999999999998754321  111   3457999999999988      57 99999998


Q ss_pred             CCCCCCCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCChhHHHHHHHHHH
Q 018503          125 GTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDYLAEVCREWEG  204 (355)
Q Consensus       125 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~~y~~k~~~~~~~  204 (355)
                      +...      .        ......++++++++  .++++||++||..+  +..  .          .   .+...+.  
T Consensus        76 ~~~~------~--------~~~~~~~~i~aa~~--~gv~~~V~~Ss~~~--~~~--~----------~---~~~~~~~--  120 (285)
T TIGR03649        76 PPIP------D--------LAPPMIKFIDFARS--KGVRRFVLLSASII--EKG--G----------P---AMGQVHA--  120 (285)
T ss_pred             CCCC------C--------hhHHHHHHHHHHHH--cCCCEEEEeecccc--CCC--C----------c---hHHHHHH--
Confidence            6321      0        02244588999999  79999999998654  210  0          0   0101111  


Q ss_pred             HHhccCCCCeEEEEEecEEEeCCCCcccchHHHHHHHhCCC-C-CCCCcceecccHHHHHHHHHHHHhCCC-CCCceEec
Q 018503          205 TALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGP-L-GSGQQWFSWIHLDDIVNLIYEALSNPS-YRGVINGT  281 (355)
Q Consensus       205 ~~~~~~~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~i~v~Dva~~~~~~~~~~~-~~~~~~i~  281 (355)
                       ......+++++++||+.++++.....  ...  ....... + +.++..+++++++|+|++++.++..+. .++.|++.
T Consensus       121 -~l~~~~gi~~tilRp~~f~~~~~~~~--~~~--~~~~~~~~~~~~g~~~~~~v~~~Dva~~~~~~l~~~~~~~~~~~l~  195 (285)
T TIGR03649       121 -HLDSLGGVEYTVLRPTWFMENFSEEF--HVE--AIRKENKIYSATGDGKIPFVSADDIARVAYRALTDKVAPNTDYVVL  195 (285)
T ss_pred             -HHHhccCCCEEEEeccHHhhhhcccc--ccc--ccccCCeEEecCCCCccCcccHHHHHHHHHHHhcCCCcCCCeEEee
Confidence             11111489999999999886532110  011  1112222 2 456788999999999999999998765 45689999


Q ss_pred             CCCccCHHHHHHHHHHHhCCC-CCCCCcHHHHHHHhc---cccee----------ee--cCccccchhHHhCCCCCCccC
Q 018503          282 APNPVRLAEMCDHLGNVLGRP-SWLPVPEFALKAVLG---EGAFV----------VL--EGQRVVPARAKELGFPFKYRY  345 (355)
Q Consensus       282 ~~~~~s~~el~~~i~~~~g~~-~~~~~~~~~~~~~~~---~~~~~----------~~--~~~~~~~~k~~~lG~~p~~~~  345 (355)
                      +++.+|+.|+++.+++.+|++ ....+|.......+.   .+...          ..  .....+.+-.+-+|.+|+  +
T Consensus       196 g~~~~s~~eia~~l~~~~g~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~G~~p~--~  273 (285)
T TIGR03649       196 GPELLTYDDVAEILSRVLGRKITHVKLTEEELAQRLQSFGMPEDLARMLASLDTAVKNGAEVRLNDVVKAVTGSKPR--G  273 (285)
T ss_pred             CCccCCHHHHHHHHHHHhCCceEEEeCCHHHHHHHHHHcCCCHHHHHHHHHHHHHHhCCccccccchHHHHhCcCCc--c
Confidence            999999999999999999998 445666554443211   11000          00  011122222345899999  8


Q ss_pred             HHHHHHHHh
Q 018503          346 VKDALKAIM  354 (355)
Q Consensus       346 ~~~~l~~~~  354 (355)
                      +++.+++..
T Consensus       274 ~~~~~~~~~  282 (285)
T TIGR03649       274 FRDFAESNK  282 (285)
T ss_pred             HHHHHHHhh
Confidence            999998764

This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=99.93  E-value=1.5e-24  Score=211.89  Aligned_cols=264  Identities=16%  Similarity=0.168  Sum_probs=181.3

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcC--CCcEEEECCC
Q 018503           48 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ--GSTAVVNLAG  125 (355)
Q Consensus        48 ~~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--~~d~vi~~a~  125 (355)
                      ++.||||||||+||||++|++.|.++|++|....                    .|+.|.+.+.+.+.  ++|+|||||+
T Consensus       378 ~~~mkiLVtGa~G~iG~~l~~~L~~~g~~v~~~~--------------------~~l~d~~~v~~~i~~~~pd~Vih~Aa  437 (668)
T PLN02260        378 KPSLKFLIYGRTGWIGGLLGKLCEKQGIAYEYGK--------------------GRLEDRSSLLADIRNVKPTHVFNAAG  437 (668)
T ss_pred             CCCceEEEECCCchHHHHHHHHHHhCCCeEEeec--------------------cccccHHHHHHHHHhhCCCEEEECCc
Confidence            3568999999999999999999999999883110                    24556667776665  7899999999


Q ss_pred             CCCC--CCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCC------CCccccCCCCCC---Chh
Q 018503          126 TPIG--TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTS------ETEVFDESSPSG---NDY  194 (355)
Q Consensus       126 ~~~~--~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~------~~~~~~e~~~~~---~~y  194 (355)
                      ....  .+++..++...+++|+.++.+|+++|++  .+++ ++++||+++  |+..      .+.+++|++++.   +.|
T Consensus       438 ~~~~~~~~~~~~~~~~~~~~N~~gt~~l~~a~~~--~g~~-~v~~Ss~~v--~~~~~~~~~~~~~p~~E~~~~~~~~~~Y  512 (668)
T PLN02260        438 VTGRPNVDWCESHKVETIRANVVGTLTLADVCRE--NGLL-MMNFATGCI--FEYDAKHPEGSGIGFKEEDKPNFTGSFY  512 (668)
T ss_pred             ccCCCCCChHHhCHHHHHHHHhHHHHHHHHHHHH--cCCe-EEEEcccce--ecCCcccccccCCCCCcCCCCCCCCChh
Confidence            7642  3455677889999999999999999999  6774 678888888  6421      134677765442   457


Q ss_pred             -HHHHHHHHHHHHhccCCCCeEEEEEecEEEeCCCCcccchHHHHHHHhCCCCCCCCcceecccHHHHHHHHHHHHhCCC
Q 018503          195 -LAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPS  273 (355)
Q Consensus       195 -~~k~~~~~~~~~~~~~~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~  273 (355)
                       .+|...|.....+     .++.++|+.++||........++..+... ...+.-   ..+..+++|++.+++.++..+ 
T Consensus       513 g~sK~~~E~~~~~~-----~~~~~~r~~~~~~~~~~~~~nfv~~~~~~-~~~~~v---p~~~~~~~~~~~~~~~l~~~~-  582 (668)
T PLN02260        513 SKTKAMVEELLREY-----DNVCTLRVRMPISSDLSNPRNFITKISRY-NKVVNI---PNSMTVLDELLPISIEMAKRN-  582 (668)
T ss_pred             hHHHHHHHHHHHhh-----hhheEEEEEEecccCCCCccHHHHHHhcc-ceeecc---CCCceehhhHHHHHHHHHHhC-
Confidence             7787777766543     25678898989975422222344332111 112211   234678888999888888753 


Q ss_pred             CCCceEecCCCccCHHHHHHHHHHHhCCCC-CCCCcHHHHHH-HhcccceeeecCccccchhHHh-CCCCCCccCHHHHH
Q 018503          274 YRGVINGTAPNPVRLAEMCDHLGNVLGRPS-WLPVPEFALKA-VLGEGAFVVLEGQRVVPARAKE-LGFPFKYRYVKDAL  350 (355)
Q Consensus       274 ~~~~~~i~~~~~~s~~el~~~i~~~~g~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~k~~~-lG~~p~~~~~~~~l  350 (355)
                      .+|+||+++++.+|+.|+++.+.+.++... ..++....... ....    ...+ .++++|+++ +|. +.  +|+|+|
T Consensus       583 ~~giyni~~~~~~s~~e~a~~i~~~~~~~~~~~~~~~~~~~~~~~a~----rp~~-~l~~~k~~~~~~~-~~--~~~~~l  654 (668)
T PLN02260        583 LRGIWNFTNPGVVSHNEILEMYKDYIDPGFKWSNFTLEEQAKVIVAP----RSNN-EMDASKLKKEFPE-LL--SIKESL  654 (668)
T ss_pred             CCceEEecCCCcCcHHHHHHHHHHhcCCcccccccCHHHhhhHhhCC----Cccc-cccHHHHHHhCcc-cc--chHHHH
Confidence            368999999999999999999999885221 12332222220 1110    1122 688888876 677 55  699999


Q ss_pred             HHHh
Q 018503          351 KAIM  354 (355)
Q Consensus       351 ~~~~  354 (355)
                      ++++
T Consensus       655 ~~~~  658 (668)
T PLN02260        655 IKYV  658 (668)
T ss_pred             HHHH
Confidence            9876

>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases

Probab=99.93  E-value=6.2e-26  Score=192.65  Aligned_cols=229  Identities=21%  Similarity=0.245  Sum_probs=170.2

Q ss_pred             EEEEcCCchHHHHHHHHHHhCC-CeEEEEecCCchhhccCCCC-------CCc---cCCCeeecCCcchhhhcC--CCcE
Q 018503           53 VSVTGATGFIGRRLVQRLQADN-HQVRVLTRSRSKAELIFPGK-------KTR---FFPGVMIAEEPQWRDCIQ--GSTA  119 (355)
Q Consensus        53 IlVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~-------~~~---~~~~~d~~~~~~~~~~~~--~~d~  119 (355)
                      ||||||+|.||+.|+++|++.+ .++++++|++.+...+....       ...   ...-.|+.|.+.+.++++  ++|+
T Consensus         1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~~~l~~~~~~~~pdi   80 (293)
T PF02719_consen    1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVRDKERLNRIFEEYKPDI   80 (293)
T ss_dssp             EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCCHHHHHHHHTT--T-SE
T ss_pred             CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeecccCHHHHHHHHhhcCCCE
Confidence            7999999999999999999987 68999999987654332221       000   011358889999999998  8999


Q ss_pred             EEECCCCCCCCCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCChh-HHHH
Q 018503          120 VVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-LAEV  198 (355)
Q Consensus       120 vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~~y-~~k~  198 (355)
                      |||+|+.-+. ...+..+.+..++|+.|+.+++++|.+  .++++||++||.-+              -.|.+.| .+|.
T Consensus        81 VfHaAA~KhV-pl~E~~p~eav~tNv~GT~nv~~aa~~--~~v~~~v~ISTDKA--------------v~PtnvmGatKr  143 (293)
T PF02719_consen   81 VFHAAALKHV-PLMEDNPFEAVKTNVLGTQNVAEAAIE--HGVERFVFISTDKA--------------VNPTNVMGATKR  143 (293)
T ss_dssp             EEE------H-HHHCCCHHHHHHHHCHHHHHHHHHHHH--TT-SEEEEEEECGC--------------SS--SHHHHHHH
T ss_pred             EEEChhcCCC-ChHHhCHHHHHHHHHHHHHHHHHHHHH--cCCCEEEEcccccc--------------CCCCcHHHHHHH
Confidence            9999997543 344567788999999999999999999  79999999999765              2356777 8899


Q ss_pred             HHHHHHHHhccCC---CCeEEEEEecEEEeCCCCcccchHHHH--HHHhCCCC--CCCCcceecccHHHHHHHHHHHHhC
Q 018503          199 CREWEGTALKVNK---DVRLALIRIGIVLGKDGGALAKMIPLF--MMFAGGPL--GSGQQWFSWIHLDDIVNLIYEALSN  271 (355)
Q Consensus       199 ~~~~~~~~~~~~~---~~~~~i~Rp~~i~G~~~~~~~~~~~~~--~~~~~~~~--~~~~~~~~~i~v~Dva~~~~~~~~~  271 (355)
                      ..|.....+....   +..++++|+|+|.|..+.    .+|.+  ++.+|+|+  .+++..|-|+.++++++.++.++..
T Consensus       144 laE~l~~~~~~~~~~~~t~f~~VRFGNVlgS~GS----Vip~F~~Qi~~g~PlTvT~p~mtRffmti~EAv~Lvl~a~~~  219 (293)
T PF02719_consen  144 LAEKLVQAANQYSGNSDTKFSSVRFGNVLGSRGS----VIPLFKKQIKNGGPLTVTDPDMTRFFMTIEEAVQLVLQAAAL  219 (293)
T ss_dssp             HHHHHHHHHCCTSSSS--EEEEEEE-EETTGTTS----CHHHHHHHHHTTSSEEECETT-EEEEE-HHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHhhhCCCCCcEEEEEEecceecCCCc----HHHHHHHHHHcCCcceeCCCCcEEEEecHHHHHHHHHHHHhh
Confidence            8998888887755   689999999999997644    45555  55677776  7889999999999999999999987


Q ss_pred             CCCCCceEecCCCccCHHHHHHHHHHHhCCC
Q 018503          272 PSYRGVINGTAPNPVRLAEMCDHLGNVLGRP  302 (355)
Q Consensus       272 ~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~  302 (355)
                      ...+++|.+--|+++++.|+++.+.+..|..
T Consensus       220 ~~~geifvl~mg~~v~I~dlA~~~i~~~g~~  250 (293)
T PF02719_consen  220 AKGGEIFVLDMGEPVKILDLAEAMIELSGLE  250 (293)
T ss_dssp             --TTEEEEE---TCEECCCHHHHHHHHTT-E
T ss_pred             CCCCcEEEecCCCCcCHHHHHHHHHhhcccc
Confidence            7666799898899999999999999999864

The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.

>PRK12320 hypothetical protein; Provisional

Probab=99.93  E-value=3e-24  Score=204.07  Aligned_cols=201  Identities=21%  Similarity=0.258  Sum_probs=142.8

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcCCCcEEEECCCCCCCC
Q 018503           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTPIGT  130 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~~~~~  130 (355)
                      ||||||||+||||++|++.|+++||+|++++|.+....  ....   .+...|+.++. +.+++.++|+|||+|+.... 
T Consensus         1 MkILVTGAaGFIGs~La~~Ll~~G~~Vi~ldr~~~~~~--~~~v---e~v~~Dl~d~~-l~~al~~~D~VIHLAa~~~~-   73 (699)
T PRK12320          1 MQILVTDATGAVGRSVTRQLIAAGHTVSGIAQHPHDAL--DPRV---DYVCASLRNPV-LQELAGEADAVIHLAPVDTS-   73 (699)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEEeCChhhcc--cCCc---eEEEccCCCHH-HHHHhcCCCEEEEcCccCcc-
Confidence            58999999999999999999999999999999754321  1111   13446777764 77778899999999985211 


Q ss_pred             CCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCChhHHHHHHHHHHHHhccC
Q 018503          131 RWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDYLAEVCREWEGTALKVN  210 (355)
Q Consensus       131 ~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~~y~~k~~~~~~~~~~~~~  210 (355)
                              ....+|+.++.+++++|++  .++ ++||+||.    ||...            .|.   ..|..    ...
T Consensus        74 --------~~~~vNv~Gt~nLleAA~~--~Gv-RiV~~SS~----~G~~~------------~~~---~aE~l----l~~  119 (699)
T PRK12320         74 --------APGGVGITGLAHVANAAAR--AGA-RLLFVSQA----AGRPE------------LYR---QAETL----VST  119 (699)
T ss_pred             --------chhhHHHHHHHHHHHHHHH--cCC-eEEEEECC----CCCCc------------ccc---HHHHH----HHh
Confidence                    1124799999999999999  676 69999875    43210            010   12221    122


Q ss_pred             CCCeEEEEEecEEEeCCCCc-ccchHHHHHHHhCCCCCCCCcceecccHHHHHHHHHHHHhCCCCCCceEecCCCccCHH
Q 018503          211 KDVRLALIRIGIVLGKDGGA-LAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRGVINGTAPNPVRLA  289 (355)
Q Consensus       211 ~~~~~~i~Rp~~i~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~~~~~~i~~~~~~s~~  289 (355)
                      ++++++++|++++||+.... ...++..+.  . ...  ......++|++|++++++.+++.+. .|+||+++++.+|+.
T Consensus       120 ~~~p~~ILR~~nVYGp~~~~~~~r~I~~~l--~-~~~--~~~pI~vIyVdDvv~alv~al~~~~-~GiyNIG~~~~~Si~  193 (699)
T PRK12320        120 GWAPSLVIRIAPPVGRQLDWMVCRTVATLL--R-SKV--SARPIRVLHLDDLVRFLVLALNTDR-NGVVDLATPDTTNVV  193 (699)
T ss_pred             cCCCEEEEeCceecCCCCcccHhHHHHHHH--H-HHH--cCCceEEEEHHHHHHHHHHHHhCCC-CCEEEEeCCCeeEHH
Confidence            46899999999999996432 122333221  1 111  1233457999999999999998753 569999999999999


Q ss_pred             HHHHHHHHH
Q 018503          290 EMCDHLGNV  298 (355)
Q Consensus       290 el~~~i~~~  298 (355)
                      |+++.+...
T Consensus       194 el~~~i~~~  202 (699)
T PRK12320        194 TAWRLLRSV  202 (699)
T ss_pred             HHHHHHHHh
Confidence            999999776

>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.92  E-value=1.7e-23  Score=188.78  Aligned_cols=233  Identities=22%  Similarity=0.250  Sum_probs=191.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCC-CeEEEEecCCchhhccCCCC------CCccCCCeeecCCcchhhhcCC--CcE
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADN-HQVRVLTRSRSKAELIFPGK------KTRFFPGVMIAEEPQWRDCIQG--STA  119 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~------~~~~~~~~d~~~~~~~~~~~~~--~d~  119 (355)
                      .+++||||||+|-+|+.+++++++.+ -+++.++|++.+........      ......-.|+.|.+.+.+++++  +|+
T Consensus       249 ~gK~vLVTGagGSiGsel~~qil~~~p~~i~l~~~~E~~~~~i~~el~~~~~~~~~~~~igdVrD~~~~~~~~~~~kvd~  328 (588)
T COG1086         249 TGKTVLVTGGGGSIGSELCRQILKFNPKEIILFSRDEYKLYLIDMELREKFPELKLRFYIGDVRDRDRVERAMEGHKVDI  328 (588)
T ss_pred             CCCEEEEeCCCCcHHHHHHHHHHhcCCCEEEEecCchHHHHHHHHHHHhhCCCcceEEEecccccHHHHHHHHhcCCCce
Confidence            56899999999999999999999987 58999999887643322111      0011223688899999999987  999


Q ss_pred             EEECCCCCCCCCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCChh-HHHH
Q 018503          120 VVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-LAEV  198 (355)
Q Consensus       120 vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~~y-~~k~  198 (355)
                      |||+|+..+ ....+.++.+...+|+.||+|++++|.+  .++++||++||..+.              .|.+.| .+|.
T Consensus       329 VfHAAA~KH-VPl~E~nP~Eai~tNV~GT~nv~~aa~~--~~V~~~V~iSTDKAV--------------~PtNvmGaTKr  391 (588)
T COG1086         329 VFHAAALKH-VPLVEYNPEEAIKTNVLGTENVAEAAIK--NGVKKFVLISTDKAV--------------NPTNVMGATKR  391 (588)
T ss_pred             EEEhhhhcc-CcchhcCHHHHHHHhhHhHHHHHHHHHH--hCCCEEEEEecCccc--------------CCchHhhHHHH
Confidence            999999754 4556778889999999999999999999  899999999997662              245667 8898


Q ss_pred             HHHHHHHHhccCC---CCeEEEEEecEEEeCCCCcccchHHHH--HHHhCCCC--CCCCcceecccHHHHHHHHHHHHhC
Q 018503          199 CREWEGTALKVNK---DVRLALIRIGIVLGKDGGALAKMIPLF--MMFAGGPL--GSGQQWFSWIHLDDIVNLIYEALSN  271 (355)
Q Consensus       199 ~~~~~~~~~~~~~---~~~~~i~Rp~~i~G~~~~~~~~~~~~~--~~~~~~~~--~~~~~~~~~i~v~Dva~~~~~~~~~  271 (355)
                      ..|.....+....   +-.++.+|+|+|.|..+.    .+|.+  +..+|+|+  .+++..|=|..+.|.++.++.+...
T Consensus       392 ~aE~~~~a~~~~~~~~~T~f~~VRFGNVlGSrGS----ViPlFk~QI~~GgplTvTdp~mtRyfMTI~EAv~LVlqA~a~  467 (588)
T COG1086         392 LAEKLFQAANRNVSGTGTRFCVVRFGNVLGSRGS----VIPLFKKQIAEGGPLTVTDPDMTRFFMTIPEAVQLVLQAGAI  467 (588)
T ss_pred             HHHHHHHHHhhccCCCCcEEEEEEecceecCCCC----CHHHHHHHHHcCCCccccCCCceeEEEEHHHHHHHHHHHHhh
Confidence            8888888776633   489999999999998743    56666  55677776  7889999999999999999999998


Q ss_pred             CCCCCceEecCCCccCHHHHHHHHHHHhCCC
Q 018503          272 PSYRGVINGTAPNPVRLAEMCDHLGNVLGRP  302 (355)
Q Consensus       272 ~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~  302 (355)
                      ...+++|.+--|+|+.+.|+++.+-+..|..
T Consensus       468 ~~gGeifvldMGepvkI~dLAk~mi~l~g~~  498 (588)
T COG1086         468 AKGGEIFVLDMGEPVKIIDLAKAMIELAGQT  498 (588)
T ss_pred             cCCCcEEEEcCCCCeEHHHHHHHHHHHhCCC
Confidence            7767799998899999999999999999843

>PLN02503 fatty acyl-CoA reductase 2

Probab=99.91  E-value=2.4e-23  Score=195.89  Aligned_cols=245  Identities=15%  Similarity=0.192  Sum_probs=167.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCC---eEEEEecCCchhh-------ccCC------------C------CCCccCC
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNH---QVRVLTRSRSKAE-------LIFP------------G------KKTRFFP  100 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~-------~~~~------------~------~~~~~~~  100 (355)
                      ..++|||||||||+|++|++.|++.+.   +|+++.|..+...       .+..            .      .......
T Consensus       118 ~~k~VlVTGaTGFLGk~LlekLLr~~~~v~kIy~LvR~k~~~~a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~~Ki~~v  197 (605)
T PLN02503        118 RGKNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKAKDKEAAIERLKNEVIDAELFKCLQETHGKSYQSFMLSKLVPV  197 (605)
T ss_pred             cCCEEEEcCCchHHHHHHHHHHHHhCCCCcEEEEEEecCCchhHHHHHHHHHhhhhhHHHHHHhcCccccccccccEEEE
Confidence            467999999999999999999998753   7899999754321       1100            0      0000123


Q ss_pred             CeeecCC------cchhhhcCCCcEEEECCCCCCCCCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeee
Q 018503          101 GVMIAEE------PQWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALG  174 (355)
Q Consensus       101 ~~d~~~~------~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~  174 (355)
                      ..|+.++      +....+.+++|+|||+|+...   + ..++....++|+.++.+++++|+++ ...++|||+||+++ 
T Consensus       198 ~GDl~d~~LGLs~~~~~~L~~~vDiVIH~AA~v~---f-~~~~~~a~~vNV~GT~nLLelA~~~-~~lk~fV~vSTayV-  271 (605)
T PLN02503        198 VGNVCESNLGLEPDLADEIAKEVDVIINSAANTT---F-DERYDVAIDINTRGPCHLMSFAKKC-KKLKLFLQVSTAYV-  271 (605)
T ss_pred             EeeCCCcccCCCHHHHHHHHhcCCEEEECccccc---c-ccCHHHHHHHHHHHHHHHHHHHHHc-CCCCeEEEccCcee-
Confidence            4577765      345566678999999999642   2 2346678899999999999999873 35678999999999 


Q ss_pred             eeCCCCCc----cccC----------------------------------C----------------------CCCCChh
Q 018503          175 YYGTSETE----VFDE----------------------------------S----------------------SPSGNDY  194 (355)
Q Consensus       175 ~yg~~~~~----~~~e----------------------------------~----------------------~~~~~~y  194 (355)
                       ||...+.    +++.                                  .                      ..-.+.|
T Consensus       272 -yG~~~G~i~E~~y~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~~~d~~~~~~~~~~~~~~l~~~g~~~~~~~~~pNtY  350 (605)
T PLN02503        272 -NGQRQGRIMEKPFRMGDCIARELGISNSLPHNRPALDIEAEIKLALDSKRHGFQSNSFAQKMKDLGLERAKLYGWQDTY  350 (605)
T ss_pred             -ecCCCCeeeeeecCcccccccccccccccccccccCCHHHHHHHHHHhhhcccchHHHHHHhhhcccchhhhCCCCChH
Confidence             8865321    2210                                  0                      0012456


Q ss_pred             -HHHHHHHHHHHHhccCCCCeEEEEEecEEEeCCCCcccc-------hHHHH-HHHhCC---CCCCCCcceecccHHHHH
Q 018503          195 -LAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAK-------MIPLF-MMFAGG---PLGSGQQWFSWIHLDDIV  262 (355)
Q Consensus       195 -~~k~~~~~~~~~~~~~~~~~~~i~Rp~~i~G~~~~~~~~-------~~~~~-~~~~~~---~~~~~~~~~~~i~v~Dva  262 (355)
                       .+|..+|.......  .+++++|+||+.|.+....++..       ..+.. ....|.   .+++++...|+|+++.++
T Consensus       351 t~TK~lAE~lV~~~~--~~LPv~IvRPsiV~st~~eP~pGw~d~~~~~~p~~~~~g~G~lr~~~~~~~~~~DiVPVD~vv  428 (605)
T PLN02503        351 VFTKAMGEMVINSMR--GDIPVVIIRPSVIESTWKDPFPGWMEGNRMMDPIVLYYGKGQLTGFLADPNGVLDVVPADMVV  428 (605)
T ss_pred             HHHHHHHHHHHHHhc--CCCCEEEEcCCEecccccCCccccccCccccchhhhheeccceeEEEeCCCeeEeEEeecHHH
Confidence             77777777666433  48999999999994422111111       11211 112332   126888999999999999


Q ss_pred             HHHHHHHhC-C----CCCCceEecCC--CccCHHHHHHHHHHHhCCC
Q 018503          263 NLIYEALSN-P----SYRGVINGTAP--NPVRLAEMCDHLGNVLGRP  302 (355)
Q Consensus       263 ~~~~~~~~~-~----~~~~~~~i~~~--~~~s~~el~~~i~~~~g~~  302 (355)
                      ++++.++.. .    ....+||++++  +|+++.|+.+.+.+.+.+.
T Consensus       429 na~i~a~a~~~~~~~~~~~vYn~ts~~~nP~t~~~~~~~~~~~~~~~  475 (605)
T PLN02503        429 NATLAAMAKHGGAAKPEINVYQIASSVVNPLVFQDLARLLYEHYKSS  475 (605)
T ss_pred             HHHHHHHHhhhcccCCCCCEEEeCCCCCCCeEHHHHHHHHHHHHhhC
Confidence            999999542 1    13569999988  8999999999999887653

>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B

Probab=99.90  E-value=4.2e-23  Score=169.54  Aligned_cols=183  Identities=28%  Similarity=0.434  Sum_probs=133.1

Q ss_pred             EEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcCCCcEEEECCCCCCCCCC
Q 018503           53 VSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTPIGTRW  132 (355)
Q Consensus        53 IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~~~~~~~  132 (355)
                      |+|+||||++|++++++|+++||+|++++|++++... ....   ....+|+.|++++.++++++|+||++++....   
T Consensus         1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~-~~~~---~~~~~d~~d~~~~~~al~~~d~vi~~~~~~~~---   73 (183)
T PF13460_consen    1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAED-SPGV---EIIQGDLFDPDSVKAALKGADAVIHAAGPPPK---   73 (183)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHH-CTTE---EEEESCTTCHHHHHHHHTTSSEEEECCHSTTT---
T ss_pred             eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhccc-cccc---ccceeeehhhhhhhhhhhhcchhhhhhhhhcc---
Confidence            7999999999999999999999999999999987665 2211   14457888999999999999999999975211   


Q ss_pred             ChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCChhHHHHHHHHHHHHhccCCC
Q 018503          133 SSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDYLAEVCREWEGTALKVNKD  212 (355)
Q Consensus       133 ~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~~y~~k~~~~~~~~~~~~~~~  212 (355)
                                 +...++++++++++  .+++++|++|+.++  |+...........+....|. ..+.+.+...  .+.+
T Consensus        74 -----------~~~~~~~~~~a~~~--~~~~~~v~~s~~~~--~~~~~~~~~~~~~~~~~~~~-~~~~~~e~~~--~~~~  135 (183)
T PF13460_consen   74 -----------DVDAAKNIIEAAKK--AGVKRVVYLSSAGV--YRDPPGLFSDEDKPIFPEYA-RDKREAEEAL--RESG  135 (183)
T ss_dssp             -----------HHHHHHHHHHHHHH--TTSSEEEEEEETTG--TTTCTSEEEGGTCGGGHHHH-HHHHHHHHHH--HHST
T ss_pred             -----------cccccccccccccc--cccccceeeecccc--CCCCCcccccccccchhhhH-HHHHHHHHHH--HhcC
Confidence                       16678899999999  78999999999988  77544432222222222332 2222222222  2459


Q ss_pred             CeEEEEEecEEEeCCCCcccchHHHHHHHhCCCCCCCCcceecccHHHHHHHHHHHHhC
Q 018503          213 VRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSN  271 (355)
Q Consensus       213 ~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~  271 (355)
                      ++|+++||+.+||+..... .+..          ..+....++|+.+|+|++++.++++
T Consensus       136 ~~~~ivrp~~~~~~~~~~~-~~~~----------~~~~~~~~~i~~~DvA~~~~~~l~~  183 (183)
T PF13460_consen  136 LNWTIVRPGWIYGNPSRSY-RLIK----------EGGPQGVNFISREDVAKAIVEALEN  183 (183)
T ss_dssp             SEEEEEEESEEEBTTSSSE-EEES----------STSTTSHCEEEHHHHHHHHHHHHH-
T ss_pred             CCEEEEECcEeEeCCCcce-eEEe----------ccCCCCcCcCCHHHHHHHHHHHhCC
Confidence            9999999999999974422 1211          0234456899999999999999864

...

>PLN00141 Tic62-NAD(P)-related group II protein; Provisional

Probab=99.90  E-value=7e-23  Score=176.68  Aligned_cols=228  Identities=18%  Similarity=0.194  Sum_probs=148.0

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCC-cchhhhc-CCCcEEEECCCCC
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEE-PQWRDCI-QGSTAVVNLAGTP  127 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~-~~~~~~~-~~~d~vi~~a~~~  127 (355)
                      +|+|+||||||++|++++++|+++||+|+++.|+.+................+|+.+. +.+.+.+ .++|+||++++..
T Consensus        17 ~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~Dl~d~~~~l~~~~~~~~d~vi~~~g~~   96 (251)
T PLN00141         17 TKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAKTSLPQDPSLQIVRADVTEGSDKLVEAIGDDSDAVICATGFR   96 (251)
T ss_pred             CCeEEEECCCcHHHHHHHHHHHhCCCEEEEEecCHHHHHHhcccCCceEEEEeeCCCCHHHHHHHhhcCCCEEEECCCCC
Confidence            4799999999999999999999999999999998766433221110011344677773 5676777 6899999998853


Q ss_pred             CCCCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCChhHHHHHHHHHHHHh
Q 018503          128 IGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDYLAEVCREWEGTAL  207 (355)
Q Consensus       128 ~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~~y~~k~~~~~~~~~~  207 (355)
                      ..  ..   +...+++|..++.++++++++  .+++++|++||.++  ||...+.+..+.+.....|..........+.+
T Consensus        97 ~~--~~---~~~~~~~n~~~~~~ll~a~~~--~~~~~iV~iSS~~v--~g~~~~~~~~~~~~~~~~~~~~~~~k~~~e~~  167 (251)
T PLN00141         97 RS--FD---PFAPWKVDNFGTVNLVEACRK--AGVTRFILVSSILV--NGAAMGQILNPAYIFLNLFGLTLVAKLQAEKY  167 (251)
T ss_pred             cC--CC---CCCceeeehHHHHHHHHHHHH--cCCCEEEEEccccc--cCCCcccccCcchhHHHHHHHHHHHHHHHHHH
Confidence            11  11   112246788899999999998  78899999999988  87543333322211111221000111122222


Q ss_pred             ccCCCCeEEEEEecEEEeCCCCcccchHHHHHHHhCCCCCCCCcceecccHHHHHHHHHHHHhCCCC-CCceEecCC---
Q 018503          208 KVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSY-RGVINGTAP---  283 (355)
Q Consensus       208 ~~~~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~-~~~~~i~~~---  283 (355)
                      ....+++++++||+++++......  +..     .    ........+|+.+|+|+++..++..+.. ..++.+.+.   
T Consensus       168 l~~~gi~~~iirpg~~~~~~~~~~--~~~-----~----~~~~~~~~~i~~~dvA~~~~~~~~~~~~~~~~~~~~~~~~~  236 (251)
T PLN00141        168 IRKSGINYTIVRPGGLTNDPPTGN--IVM-----E----PEDTLYEGSISRDQVAEVAVEALLCPESSYKVVEIVARADA  236 (251)
T ss_pred             HHhcCCcEEEEECCCccCCCCCce--EEE-----C----CCCccccCcccHHHHHHHHHHHhcChhhcCcEEEEecCCCC
Confidence            234689999999999997642110  000     0    0011123479999999999999988763 456777752   


Q ss_pred             CccCHHHHHHHHHH
Q 018503          284 NPVRLAEMCDHLGN  297 (355)
Q Consensus       284 ~~~s~~el~~~i~~  297 (355)
                      ...++.++...+++
T Consensus       237 ~~~~~~~~~~~~~~  250 (251)
T PLN00141        237 PKRSYKDLFASIKQ  250 (251)
T ss_pred             CchhHHHHHHHhhc
Confidence            23688888877764

>KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion]

Probab=99.90  E-value=5.9e-23  Score=168.87  Aligned_cols=242  Identities=21%  Similarity=0.283  Sum_probs=178.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchh-hccCC--CCCCccCCCeeecCCcchhhhcCCCcEEEECCC
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKA-ELIFP--GKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG  125 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~--~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~  125 (355)
                      ++..+-|+|||||+|++++.+|.+.|-+|++-.|..+.. .++..  ......+..+|+.|+++++++++...+|||+.|
T Consensus        60 sGiVaTVFGAtGFlGryvvnklak~GSQviiPyR~d~~~~r~lkvmGdLGQvl~~~fd~~DedSIr~vvk~sNVVINLIG  139 (391)
T KOG2865|consen   60 SGIVATVFGATGFLGRYVVNKLAKMGSQVIIPYRGDEYDPRHLKVMGDLGQVLFMKFDLRDEDSIRAVVKHSNVVINLIG  139 (391)
T ss_pred             cceEEEEecccccccHHHHHHHhhcCCeEEEeccCCccchhheeecccccceeeeccCCCCHHHHHHHHHhCcEEEEeec
Confidence            345678999999999999999999999999999976543 33322  222233556899999999999999999999998


Q ss_pred             CCCCCCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCChh-HHHHHHHHHH
Q 018503          126 TPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-LAEVCREWEG  204 (355)
Q Consensus       126 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~~y-~~k~~~~~~~  204 (355)
                      -    +|+.. ...+.++|+.+.+.|...|++  .|+.+||++|+..+.             -...+.| .+|...|...
T Consensus       140 r----d~eTk-nf~f~Dvn~~~aerlAricke--~GVerfIhvS~Lgan-------------v~s~Sr~LrsK~~gE~aV  199 (391)
T KOG2865|consen  140 R----DYETK-NFSFEDVNVHIAERLARICKE--AGVERFIHVSCLGAN-------------VKSPSRMLRSKAAGEEAV  199 (391)
T ss_pred             c----ccccC-CcccccccchHHHHHHHHHHh--hChhheeehhhcccc-------------ccChHHHHHhhhhhHHHH
Confidence            5    33332 236778999999999999999  899999999986541             0112233 4443333332


Q ss_pred             HHhccCCCCeEEEEEecEEEeCCCCcccchHHHHHHHhCCCC-CCC-CcceecccHHHHHHHHHHHHhCCCCC-CceEec
Q 018503          205 TALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPL-GSG-QQWFSWIHLDDIVNLIYEALSNPSYR-GVINGT  281 (355)
Q Consensus       205 ~~~~~~~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~i~v~Dva~~~~~~~~~~~~~-~~~~i~  281 (355)
                      .  .  .--..+|+||+.+||..+..++.+...++...-.++ +.| +..-..+++-|||.+++.+++++... .+|..+
T Consensus       200 r--d--afPeAtIirPa~iyG~eDrfln~ya~~~rk~~~~pL~~~GekT~K~PVyV~DVaa~IvnAvkDp~s~Gktye~v  275 (391)
T KOG2865|consen  200 R--D--AFPEATIIRPADIYGTEDRFLNYYASFWRKFGFLPLIGKGEKTVKQPVYVVDVAAAIVNAVKDPDSMGKTYEFV  275 (391)
T ss_pred             H--h--hCCcceeechhhhcccchhHHHHHHHHHHhcCceeeecCCcceeeccEEEehHHHHHHHhccCccccCceeeec
Confidence            2  1  135689999999999988777666666654433343 333 34557899999999999999998854 499999


Q ss_pred             CCCccCHHHHHHHHHHHhCCC---CCCCCcHHHHHH
Q 018503          282 APNPVRLAEMCDHLGNVLGRP---SWLPVPEFALKA  314 (355)
Q Consensus       282 ~~~~~s~~el~~~i~~~~g~~---~~~~~~~~~~~~  314 (355)
                      ++..+...|+++.+-+...+-   ..+++|-+....
T Consensus       276 GP~~yql~eLvd~my~~~~~~~ry~r~~mP~f~a~a  311 (391)
T KOG2865|consen  276 GPDRYQLSELVDIMYDMAREWPRYVRLPMPIFKAMA  311 (391)
T ss_pred             CCchhhHHHHHHHHHHHHhhccccccCCcHHHHHHH
Confidence            999999999999999888763   234555444443

>PRK06482 short chain dehydrogenase; Provisional

Probab=99.89  E-value=1.3e-21  Score=171.42  Aligned_cols=232  Identities=15%  Similarity=0.087  Sum_probs=162.0

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCC-CCccCCCeeecCCcchhhhcC-------CCcEEE
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGK-KTRFFPGVMIAEEPQWRDCIQ-------GSTAVV  121 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~~-------~~d~vi  121 (355)
                      .|+||||||+|+||++++++|+++|++|++++|+.+....+.... .......+|+.|.+++.++++       ++|+||
T Consensus         2 ~k~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi   81 (276)
T PRK06482          2 SKTWFITGASSGFGRGMTERLLARGDRVAATVRRPDALDDLKARYGDRLWVLQLDVTDSAAVRAVVDRAFAALGRIDVVV   81 (276)
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            368999999999999999999999999999999876544322110 001134578888887776553       589999


Q ss_pred             ECCCCCCC---CCCChhhHHHHHHHhhhhHHHHHHHH----HcCCCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCChh
Q 018503          122 NLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLI----NESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY  194 (355)
Q Consensus       122 ~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~----~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~~y  194 (355)
                      |+||....   ..+..+.....+++|+.++.++++++    ++  .+.+++|++||...  ..         ..+....|
T Consensus        82 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~--~~~~~iv~~sS~~~--~~---------~~~~~~~Y  148 (276)
T PRK06482         82 SNAGYGLFGAAEELSDAQIRRQIDTNLIGSIQVIRAALPHLRR--QGGGRIVQVSSEGG--QI---------AYPGFSLY  148 (276)
T ss_pred             ECCCCCCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh--cCCCEEEEEcCccc--cc---------CCCCCchh
Confidence            99997532   22345566788899999999999987    44  46678999998654  21         12334678


Q ss_pred             -HHHHHHHHHHHHhccC---CCCeEEEEEecEE---EeCCCCc---c---cc-hHH-HHHHHhCCCCCCCCcceecccHH
Q 018503          195 -LAEVCREWEGTALKVN---KDVRLALIRIGIV---LGKDGGA---L---AK-MIP-LFMMFAGGPLGSGQQWFSWIHLD  259 (355)
Q Consensus       195 -~~k~~~~~~~~~~~~~---~~~~~~i~Rp~~i---~G~~~~~---~---~~-~~~-~~~~~~~~~~~~~~~~~~~i~v~  259 (355)
                       .+|...+.+.+.+..+   .+++++++||+.+   ||++...   .   .. ... .........+      .-+.+++
T Consensus       149 ~~sK~a~~~~~~~l~~~~~~~gi~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~d~~  222 (276)
T PRK06482        149 HATKWGIEGFVEAVAQEVAPFGIEFTIVEPGPARTNFGAGLDRGAPLDAYDDTPVGDLRRALADGSF------AIPGDPQ  222 (276)
T ss_pred             HHHHHHHHHHHHHHHHHhhccCcEEEEEeCCccccCCcccccccCCCccccchhhHHHHHHHhhccC------CCCCCHH
Confidence             7887777666555433   5899999999988   5543211   0   00 000 1111211111      1146899


Q ss_pred             HHHHHHHHHHhCCCCCCceEecCCCccCHHHHHHHHHHHhC
Q 018503          260 DIVNLIYEALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLG  300 (355)
Q Consensus       260 Dva~~~~~~~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g  300 (355)
                      |++++++.++..+.....||+++++..+..|++..+.+.++
T Consensus       223 ~~~~a~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~  263 (276)
T PRK06482        223 KMVQAMIASADQTPAPRRLTLGSDAYASIRAALSERLAALE  263 (276)
T ss_pred             HHHHHHHHHHcCCCCCeEEecChHHHHHHHHHHHHHHHHHH
Confidence            99999999998765566899999988888888888877774

>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional

Probab=99.87  E-value=3.8e-21  Score=177.83  Aligned_cols=227  Identities=15%  Similarity=0.102  Sum_probs=147.1

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCC---------C----CCccCCCeeecCCcchhhhc
Q 018503           48 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG---------K----KTRFFPGVMIAEEPQWRDCI  114 (355)
Q Consensus        48 ~~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~---------~----~~~~~~~~d~~~~~~~~~~~  114 (355)
                      .++++||||||+|+||++++++|++.|++|++++|+..+...+...         .    ....+..+|+.|.+++.+++
T Consensus        78 ~~gKvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~esI~~aL  157 (576)
T PLN03209         78 KDEDLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQIGPAL  157 (576)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHHHHHHHh
Confidence            3557899999999999999999999999999999988765432110         0    00113457888999999999


Q ss_pred             CCCcEEEECCCCCCCCCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCChh
Q 018503          115 QGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY  194 (355)
Q Consensus       115 ~~~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~~y  194 (355)
                      .++|+|||++|....   ...+....+++|+.++.++++++..  .++++||++||.++...+.      ... .....+
T Consensus       158 ggiDiVVn~AG~~~~---~v~d~~~~~~VN~~Gt~nLl~Aa~~--agVgRIV~VSSiga~~~g~------p~~-~~~sk~  225 (576)
T PLN03209        158 GNASVVICCIGASEK---EVFDVTGPYRIDYLATKNLVDAATV--AKVNHFILVTSLGTNKVGF------PAA-ILNLFW  225 (576)
T ss_pred             cCCCEEEEccccccc---cccchhhHHHHHHHHHHHHHHHHHH--hCCCEEEEEccchhcccCc------ccc-chhhHH
Confidence            999999999986421   1123456678999999999999998  7889999999976511111      000 011111


Q ss_pred             -HHHHHHHHHHHHhccCCCCeEEEEEecEEEeCCCCcccchHHHHHHHhCCCCCCCCcceecccHHHHHHHHHHHHhCCC
Q 018503          195 -LAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPS  273 (355)
Q Consensus       195 -~~k~~~~~~~~~~~~~~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~  273 (355)
                       +...+...+..+  ...|++|++||||+++++.......  ..+....+     .......+..+|||++++.++.++.
T Consensus       226 ~~~~~KraaE~~L--~~sGIrvTIVRPG~L~tp~d~~~~t--~~v~~~~~-----d~~~gr~isreDVA~vVvfLasd~~  296 (576)
T PLN03209        226 GVLCWKRKAEEAL--IASGLPYTIVRPGGMERPTDAYKET--HNLTLSEE-----DTLFGGQVSNLQVAELMACMAKNRR  296 (576)
T ss_pred             HHHHHHHHHHHHH--HHcCCCEEEEECCeecCCccccccc--cceeeccc-----cccCCCccCHHHHHHHHHHHHcCch
Confidence             111122222222  2369999999999998774321100  00000000     0111235889999999999998664


Q ss_pred             --CCCceEecCCCc---cCHHHHHHHH
Q 018503          274 --YRGVINGTAPNP---VRLAEMCDHL  295 (355)
Q Consensus       274 --~~~~~~i~~~~~---~s~~el~~~i  295 (355)
                        ...+|.+.++..   .++.+++..+
T Consensus       297 as~~kvvevi~~~~~p~~~~~~~~~~i  323 (576)
T PLN03209        297 LSYCKVVEVIAETTAPLTPMEELLAKI  323 (576)
T ss_pred             hccceEEEEEeCCCCCCCCHHHHHHhc
Confidence              345888887653   3455554443

>PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila

Probab=99.86  E-value=2.9e-22  Score=172.38  Aligned_cols=203  Identities=17%  Similarity=0.250  Sum_probs=113.8

Q ss_pred             EEcCCchHHHHHHHHHHhCCC--eEEEEecCCchh---hcc----CCCC----------CCccCCCeeecCC------cc
Q 018503           55 VTGATGFIGRRLVQRLQADNH--QVRVLTRSRSKA---ELI----FPGK----------KTRFFPGVMIAEE------PQ  109 (355)
Q Consensus        55 VtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~---~~~----~~~~----------~~~~~~~~d~~~~------~~  109 (355)
                      |||||||+|++|+++|++.+.  +|+++.|..+..   ..+    ....          ........|+.++      +.
T Consensus         1 lTGaTGflG~~ll~~Ll~~~~~~~I~cLvR~~~~~~~~~rl~~~l~~~~~~~~~~~~~~~ri~~v~GDl~~~~lGL~~~~   80 (249)
T PF07993_consen    1 LTGATGFLGSHLLEELLRQPPDVKIYCLVRASSSQSALERLKDALKEYGLWDDLDKEALSRIEVVEGDLSQPNLGLSDED   80 (249)
T ss_dssp             EE-TTSHHHHHHHHHHHHHS-TTEEEEEE-SSSHHHHHHHHHGGG-SS-HHHHH-HHHTTTEEEEE--TTSGGGG--HHH
T ss_pred             CcCCCcHHHHHHHHHHHcCCCCcEEEEEEeCcccccchhhhhhhcccccchhhhhhhhhccEEEEeccccccccCCChHH
Confidence            799999999999999999876  999999987541   111    1000          0001223455543      45


Q ss_pred             hhhhcCCCcEEEECCCCCCCCCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCCCCcc------
Q 018503          110 WRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEV------  183 (355)
Q Consensus       110 ~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~~~~------  183 (355)
                      +..+.+++|+|||||+...   +.. +...+++.|+.+++++++.|.+  ...++|+|+||+.+  .+...+..      
T Consensus        81 ~~~L~~~v~~IiH~Aa~v~---~~~-~~~~~~~~NV~gt~~ll~la~~--~~~~~~~~iSTa~v--~~~~~~~~~~~~~~  152 (249)
T PF07993_consen   81 YQELAEEVDVIIHCAASVN---FNA-PYSELRAVNVDGTRNLLRLAAQ--GKRKRFHYISTAYV--AGSRPGTIEEKVYP  152 (249)
T ss_dssp             HHHHHHH--EEEE--SS-S---BS--S--EEHHHHHHHHHHHHHHHTS--SS---EEEEEEGGG--TTS-TTT--SSS-H
T ss_pred             hhccccccceeeecchhhh---hcc-cchhhhhhHHHHHHHHHHHHHh--ccCcceEEeccccc--cCCCCCcccccccc
Confidence            6677778999999999642   222 3345788999999999999997  56669999999555  33322211      


Q ss_pred             -----ccCCCCCCChh-HHHHHHHHHHHHhccCCCCeEEEEEecEEEeCCC-Ccc--cc-hHHHH--HHHhCC-C--CCC
Q 018503          184 -----FDESSPSGNDY-LAEVCREWEGTALKVNKDVRLALIRIGIVLGKDG-GAL--AK-MIPLF--MMFAGG-P--LGS  248 (355)
Q Consensus       184 -----~~e~~~~~~~y-~~k~~~~~~~~~~~~~~~~~~~i~Rp~~i~G~~~-~~~--~~-~~~~~--~~~~~~-~--~~~  248 (355)
                           .+......+.| .+|+..|.+...+..+.|++++|+||+.|+|... +..  .. +...+  ....+. +  .+.
T Consensus       153 ~~~~~~~~~~~~~~gY~~SK~~aE~~l~~a~~~~g~p~~I~Rp~~i~g~~~~G~~~~~~~~~~~~~~~~~~~~~p~~~~~  232 (249)
T PF07993_consen  153 EEEDDLDPPQGFPNGYEQSKWVAERLLREAAQRHGLPVTIYRPGIIVGDSRTGWWNSDDFFPYLLRSCIALGAFPDLPGD  232 (249)
T ss_dssp             HH--EEE--TTSEE-HHHHHHHHHHHHHHHHHHH---EEEEEE-EEE-SSSSS---TTBHHHHHHHHHHHH-EEES-SB-
T ss_pred             cccccchhhccCCccHHHHHHHHHHHHHHHHhcCCceEEEEecCcccccCCCceeeccchHHHHHHHHHHcCCcccccCC
Confidence                 11111234578 9999999998888776799999999999999432 211  12 11111  122222 1  144


Q ss_pred             CCcceecccHHHHHHHH
Q 018503          249 GQQWFSWIHLDDIVNLI  265 (355)
Q Consensus       249 ~~~~~~~i~v~Dva~~~  265 (355)
                      .+..+++++|+.+|++|
T Consensus       233 ~~~~~d~vPVD~va~aI  249 (249)
T PF07993_consen  233 PDARLDLVPVDYVARAI  249 (249)
T ss_dssp             --TT--EEEHHHHHHHH
T ss_pred             CCceEeEECHHHHHhhC
Confidence            45669999999999986

A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A.

>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase

Probab=99.86  E-value=2.7e-20  Score=196.54  Aligned_cols=253  Identities=17%  Similarity=0.221  Sum_probs=172.6

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCC----CeEEEEecCCchhhccCC-------------C-CCCccCCCeeecC-----
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADN----HQVRVLTRSRSKAELIFP-------------G-KKTRFFPGVMIAE-----  106 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g----~~V~~~~r~~~~~~~~~~-------------~-~~~~~~~~~d~~~-----  106 (355)
                      .++|+|||||||+|++++++|++++    ++|+++.|+.........             . .....+...|+.+     
T Consensus       971 ~~~VlvTGatGflG~~l~~~Ll~~~~~~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~gDl~~~~lgl 1050 (1389)
T TIGR03443       971 PITVFLTGATGFLGSFILRDLLTRRSNSNFKVFAHVRAKSEEAGLERLRKTGTTYGIWDEEWASRIEVVLGDLSKEKFGL 1050 (1389)
T ss_pred             CceEEEeCCccccHHHHHHHHHhcCCCCCcEEEEEECcCChHHHHHHHHHHHHHhCCCchhhhcceEEEeccCCCccCCc
Confidence            4789999999999999999999876    899999997543221100             0 0000022345542     


Q ss_pred             -CcchhhhcCCCcEEEECCCCCCCCCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCCC-----
Q 018503          107 -EPQWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSE-----  180 (355)
Q Consensus       107 -~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~-----  180 (355)
                       .+.+.++..++|+|||+|+...   +. .....+...|+.++.++++++..  .+.++|+|+||.++  |+...     
T Consensus      1051 ~~~~~~~l~~~~d~iiH~Aa~~~---~~-~~~~~~~~~nv~gt~~ll~~a~~--~~~~~~v~vSS~~v--~~~~~~~~~~ 1122 (1389)
T TIGR03443      1051 SDEKWSDLTNEVDVIIHNGALVH---WV-YPYSKLRDANVIGTINVLNLCAE--GKAKQFSFVSSTSA--LDTEYYVNLS 1122 (1389)
T ss_pred             CHHHHHHHHhcCCEEEECCcEec---Cc-cCHHHHHHhHHHHHHHHHHHHHh--CCCceEEEEeCeee--cCcccccchh
Confidence             3456666778999999998642   21 22345567899999999999998  67889999999988  75311     


Q ss_pred             -------CccccCCCC-------CCChh-HHHHHHHHHHHHhccCCCCeEEEEEecEEEeCCCCc---ccchHHHH-H-H
Q 018503          181 -------TEVFDESSP-------SGNDY-LAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGA---LAKMIPLF-M-M  240 (355)
Q Consensus       181 -------~~~~~e~~~-------~~~~y-~~k~~~~~~~~~~~~~~~~~~~i~Rp~~i~G~~~~~---~~~~~~~~-~-~  240 (355)
                             ...+.|..+       ....| .+|...|.+...+.. .|++++++||+.|||+....   ...++..+ . .
T Consensus      1123 ~~~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~aE~l~~~~~~-~g~~~~i~Rpg~v~G~~~~g~~~~~~~~~~~~~~~ 1201 (1389)
T TIGR03443      1123 DELVQAGGAGIPESDDLMGSSKGLGTGYGQSKWVAEYIIREAGK-RGLRGCIVRPGYVTGDSKTGATNTDDFLLRMLKGC 1201 (1389)
T ss_pred             hhhhhccCCCCCcccccccccccCCCChHHHHHHHHHHHHHHHh-CCCCEEEECCCccccCCCcCCCCchhHHHHHHHHH
Confidence                   112233221       23458 888888887776654 49999999999999986422   12223222 1 1


Q ss_pred             HhCCCCCCCCcceecccHHHHHHHHHHHHhCCC---CCCceEecCCCccCHHHHHHHHHHHhCCC-CCCCCcHHHH
Q 018503          241 FAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPS---YRGVINGTAPNPVRLAEMCDHLGNVLGRP-SWLPVPEFAL  312 (355)
Q Consensus       241 ~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~---~~~~~~i~~~~~~s~~el~~~i~~~~g~~-~~~~~~~~~~  312 (355)
                      .....+......+++++++|+|++++.++..+.   ...+||++++..+++.++++.+.+. |.+ ..++.+.|..
T Consensus      1202 ~~~~~~p~~~~~~~~~~Vddva~ai~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~-g~~~~~~~~~~w~~ 1276 (1389)
T TIGR03443      1202 IQLGLIPNINNTVNMVPVDHVARVVVAAALNPPKESELAVAHVTGHPRIRFNDFLGTLKTY-GYDVEIVDYVHWRK 1276 (1389)
T ss_pred             HHhCCcCCCCCccccccHHHHHHHHHHHHhCCcccCCCCEEEeCCCCCCcHHHHHHHHHHh-CCCCCccCHHHHHH
Confidence            122223445567899999999999999987653   2348999999889999999999764 655 3345555544

Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.

>KOG1372 consensus GDP-mannose 4,6 dehydratase [Carbohydrate transport and metabolism]

Probab=99.85  E-value=9.8e-21  Score=152.69  Aligned_cols=297  Identities=18%  Similarity=0.179  Sum_probs=197.0

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhc-----cCCC-----CCCccCCCeeecCCcchhhhcC--CC
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAEL-----IFPG-----KKTRFFPGVMIAEEPQWRDCIQ--GS  117 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-----~~~~-----~~~~~~~~~d~~~~~~~~~~~~--~~  117 (355)
                      .+..||||-||+=|++|++.|+.+||+|.++.|.++....     +...     .........|++|...+.+++.  ++
T Consensus        28 rkvALITGItGQDGSYLaEfLL~KgYeVHGiiRRsSsFNT~RIeHlY~nP~~h~~~~mkLHYgDmTDss~L~k~I~~ikP  107 (376)
T KOG1372|consen   28 RKVALITGITGQDGSYLAEFLLSKGYEVHGIIRRSSSFNTARIEHLYSNPHTHNGASMKLHYGDMTDSSCLIKLISTIKP  107 (376)
T ss_pred             ceEEEEecccCCCchHHHHHHHhCCceeeEEEeeccccchhhhhhhhcCchhcccceeEEeeccccchHHHHHHHhccCc
Confidence            3568999999999999999999999999999997765321     1110     1111123357888888888886  67


Q ss_pred             cEEEECCCCCCCCCCChhhHHHHHHHhhhhHHHHHHHHHcCC-CCCCcEEEEeeeeeeeeCCCCCccccCCCC--CCChh
Q 018503          118 TAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESP-EGVRPSVLVSATALGYYGTSETEVFDESSP--SGNDY  194 (355)
Q Consensus       118 d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~--~~~~y  194 (355)
                      +-|+|+|+..+. ..+-+-++..-++...|+..|+++++.+. ...-+|--.||+..  ||.-...|..|..|  |.++|
T Consensus       108 tEiYnLaAQSHV-kvSFdlpeYTAeVdavGtLRlLdAi~~c~l~~~VrfYQAstSEl--yGkv~e~PQsE~TPFyPRSPY  184 (376)
T KOG1372|consen  108 TEVYNLAAQSHV-KVSFDLPEYTAEVDAVGTLRLLDAIRACRLTEKVRFYQASTSEL--YGKVQEIPQSETTPFYPRSPY  184 (376)
T ss_pred             hhhhhhhhhcce-EEEeecccceeeccchhhhhHHHHHHhcCcccceeEEecccHhh--cccccCCCcccCCCCCCCChh
Confidence            899999998643 11223344555788889999999999863 22235656666666  99888889999887  46678


Q ss_pred             -HHHHHHHHHHHHhccCCCCeEEEEEecEEE---eCCCC--cccchHHH-H-HHHhCCC----CCCCCcceecccHHHHH
Q 018503          195 -LAEVCREWEGTALKVNKDVRLALIRIGIVL---GKDGG--ALAKMIPL-F-MMFAGGP----LGSGQQWFSWIHLDDIV  262 (355)
Q Consensus       195 -~~k~~~~~~~~~~~~~~~~~~~i~Rp~~i~---G~~~~--~~~~~~~~-~-~~~~~~~----~~~~~~~~~~i~v~Dva  262 (355)
                       .+|...-++...++..+++-.|.   |.+|   .|..+  ...+-+.. + ++..++.    +|+-++.+||-|+.|-+
T Consensus       185 a~aKmy~~WivvNyREAYnmfAcN---GILFNHESPRRGenFVTRKItRsvakI~~gqqe~~~LGNL~a~RDWGhA~dYV  261 (376)
T KOG1372|consen  185 AAAKMYGYWIVVNYREAYNMFACN---GILFNHESPRRGENFVTRKITRSVAKISLGQQEKIELGNLSALRDWGHAGDYV  261 (376)
T ss_pred             HHhhhhheEEEEEhHHhhcceeec---cEeecCCCCccccchhhHHHHHHHHHhhhcceeeEEecchhhhcccchhHHHH
Confidence             77766666655555555555443   4444   34332  22222221 1 3333332    37888999999999999


Q ss_pred             HHHHHHHhCCCCCCceEecCCCccCHHHHHHHHHHHhCCCCCCCCcHHHHHHHhcc--------cceee---ecCccccc
Q 018503          263 NLIYEALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGE--------GAFVV---LEGQRVVP  331 (355)
Q Consensus       263 ~~~~~~~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~--------~~~~~---~~~~~~~~  331 (355)
                      +++..+++++. ...|.|..|+..|++|+.+.--...|+...+.-..-..-..-.+        +.++.   -+.-.-+.
T Consensus       262 EAMW~mLQ~d~-PdDfViATge~hsVrEF~~~aF~~ig~~l~Weg~gv~~~~~n~~g~v~V~v~~kYyRPtEVd~LqGda  340 (376)
T KOG1372|consen  262 EAMWLMLQQDS-PDDFVIATGEQHSVREFCNLAFAEIGEVLNWEGEGVDEVGKNDDGVVRVKVDPKYYRPTEVDTLQGDA  340 (376)
T ss_pred             HHHHHHHhcCC-CCceEEecCCcccHHHHHHHHHHhhCcEEeecccccccccccCCceEEEEecccccCcchhhhhcCCh
Confidence            99999999875 56888999999999999999888888642111000000000000        01110   11222345


Q ss_pred             hhHH-hCCCCCCccCHHHHHHHHh
Q 018503          332 ARAK-ELGFPFKYRYVKDALKAIM  354 (355)
Q Consensus       332 ~k~~-~lG~~p~~~~~~~~l~~~~  354 (355)
                      +|++ .|||+|+.+ +.+-+++++
T Consensus       341 sKAk~~LgW~pkv~-f~eLVkeMv  363 (376)
T KOG1372|consen  341 SKAKKTLGWKPKVT-FPELVKEMV  363 (376)
T ss_pred             HHHHHhhCCCCccC-HHHHHHHHH
Confidence            7775 599999997 999998876

>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional

Probab=99.85  E-value=3.7e-20  Score=160.97  Aligned_cols=220  Identities=16%  Similarity=0.086  Sum_probs=144.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCC----CCCCccCCCeeecCCcchhhhcC-------CC
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP----GKKTRFFPGVMIAEEPQWRDCIQ-------GS  117 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~~d~~~~~~~~~~~~-------~~  117 (355)
                      +++++|||||+|+||+++++.|+++|++|++++|+++.......    .........+|+.|.+.+.++++       ++
T Consensus         6 ~~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~   85 (262)
T PRK13394          6 NGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKAGGKAIGVAMDVTNEDAVNAGIDKVAERFGSV   85 (262)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            35789999999999999999999999999999998854432211    11101134578888887776654       48


Q ss_pred             cEEEECCCCCCC---CCCChhhHHHHHHHhhhh----HHHHHHHH-HcCCCCCCcEEEEeeeeeeeeCCCCCccccCCCC
Q 018503          118 TAVVNLAGTPIG---TRWSSEIKKEIKESRIRV----TSKVVDLI-NESPEGVRPSVLVSATALGYYGTSETEVFDESSP  189 (355)
Q Consensus       118 d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~----~~~l~~a~-~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~  189 (355)
                      |+|||+||....   .....+.....+++|+.+    +..+++++ +.  .+.+++|++||...  +..         .+
T Consensus        86 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~--~~~~~iv~~ss~~~--~~~---------~~  152 (262)
T PRK13394         86 DILVSNAGIQIVNPIENYSFADWKKMQAIHVDGAFLTTKAALKHMYKD--DRGGVVIYMGSVHS--HEA---------SP  152 (262)
T ss_pred             CEEEECCccCCCCchhhCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhh--cCCcEEEEEcchhh--cCC---------CC
Confidence            999999997432   123445567788899999    66666666 55  56789999999654  211         12


Q ss_pred             CCChh-HHHHHHHHHHHHhccC---CCCeEEEEEecEEEeCCCCcccchHHHHHHHhC--------CCCCCCCcceeccc
Q 018503          190 SGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAG--------GPLGSGQQWFSWIH  257 (355)
Q Consensus       190 ~~~~y-~~k~~~~~~~~~~~~~---~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~i~  257 (355)
                      ....| .+|...+...+.+..+   .+++++++||+.++++.....   ++......+        ..+..+....++++
T Consensus       153 ~~~~y~~sk~a~~~~~~~la~~~~~~~i~v~~v~pg~v~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (262)
T PRK13394        153 LKSAYVTAKHGLLGLARVLAKEGAKHNVRSHVVCPGFVRTPLVDKQ---IPEQAKELGISEEEVVKKVMLGKTVDGVFTT  229 (262)
T ss_pred             CCcccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccchhhhhh---hHhhhhccCCChHHHHHHHHhcCCCCCCCCC
Confidence            23456 6666555444433332   489999999999998753111   110000000        00122334567999


Q ss_pred             HHHHHHHHHHHHhCCC---CCCceEecCCC
Q 018503          258 LDDIVNLIYEALSNPS---YRGVINGTAPN  284 (355)
Q Consensus       258 v~Dva~~~~~~~~~~~---~~~~~~i~~~~  284 (355)
                      ++|+|++++.++..+.   .+..|++.++.
T Consensus       230 ~~dva~a~~~l~~~~~~~~~g~~~~~~~g~  259 (262)
T PRK13394        230 VEDVAQTVLFLSSFPSAALTGQSFVVSHGW  259 (262)
T ss_pred             HHHHHHHHHHHcCccccCCcCCEEeeCCce
Confidence            9999999999998653   24478887664

>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.84  E-value=1.4e-19  Score=155.90  Aligned_cols=220  Identities=17%  Similarity=0.045  Sum_probs=146.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhcc-----CCCCCCccCCCeeecCCcchhhhcC-------C
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELI-----FPGKKTRFFPGVMIAEEPQWRDCIQ-------G  116 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-----~~~~~~~~~~~~d~~~~~~~~~~~~-------~  116 (355)
                      ++|+||||||||++|++|+++|+++|++|+++.|+.......     ...........+|+.|.+++.++++       +
T Consensus         5 ~~~~vlItGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~   84 (249)
T PRK12825          5 MGRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEALGRRAQAVQADVTDKAALEAAVAAAVERFGR   84 (249)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCcCCHHHHHHHHHHHHHHcCC
Confidence            346899999999999999999999999998888876532211     0100001134578888887776653       6


Q ss_pred             CcEEEECCCCCCCC---CCChhhHHHHHHHhhhhHHHHHHHHHcC--CCCCCcEEEEeeeeeeeeCCCCCccccCCCCCC
Q 018503          117 STAVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSG  191 (355)
Q Consensus       117 ~d~vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~  191 (355)
                      +|+|||+||.....   ....+.....+++|+.++.++++++...  ..+.+++|++||...  +...         +..
T Consensus        85 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~i~~SS~~~--~~~~---------~~~  153 (249)
T PRK12825         85 IDILVNNAGIFEDKPLADMSDDEWDEVIDVNLSGVFHLLRAVVPPMRKQRGGRIVNISSVAG--LPGW---------PGR  153 (249)
T ss_pred             CCEEEECCccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECcccc--CCCC---------CCc
Confidence            79999999964221   1245566788899999999998887321  146789999999876  3211         123


Q ss_pred             Chh-HHHHHHHHHHHHhcc---CCCCeEEEEEecEEEeCCCCcccchHHHHHHHhCCCCCCCCcceecccHHHHHHHHHH
Q 018503          192 NDY-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYE  267 (355)
Q Consensus       192 ~~y-~~k~~~~~~~~~~~~---~~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~  267 (355)
                      ..| .+|...+.+...+..   ..+++++++||+.++++.....  ...... .. .+   ......+++.+|+++++..
T Consensus       154 ~~y~~sK~~~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~--~~~~~~-~~-~~---~~~~~~~~~~~dva~~~~~  226 (249)
T PRK12825        154 SNYAAAKAGLVGLTKALARELAEYGITVNMVAPGDIDTDMKEAT--IEEARE-AK-DA---ETPLGRSGTPEDIARAVAF  226 (249)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECCccCCccccc--cchhHH-hh-hc---cCCCCCCcCHHHHHHHHHH
Confidence            456 666555555444333   2589999999999999864322  111111 11 00   0111238999999999999


Q ss_pred             HHhCCC---CCCceEecCCCcc
Q 018503          268 ALSNPS---YRGVINGTAPNPV  286 (355)
Q Consensus       268 ~~~~~~---~~~~~~i~~~~~~  286 (355)
                      ++..+.   .+.+|+++++..+
T Consensus       227 ~~~~~~~~~~g~~~~i~~g~~~  248 (249)
T PRK12825        227 LCSDASDYITGQVIEVTGGVDV  248 (249)
T ss_pred             HhCccccCcCCCEEEeCCCEee
Confidence            997653   3558999987643

>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

Probab=99.84  E-value=1.7e-19  Score=155.76  Aligned_cols=221  Identities=18%  Similarity=0.076  Sum_probs=147.5

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhcc----CCCCCCccCCCeeecCCcchhhhcC-------C
Q 018503           48 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELI----FPGKKTRFFPGVMIAEEPQWRDCIQ-------G  116 (355)
Q Consensus        48 ~~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~----~~~~~~~~~~~~d~~~~~~~~~~~~-------~  116 (355)
                      +++|+|+||||+|++|++++++|+++|++|++++|+.++....    ...........+|+.|.+++.++++       +
T Consensus         4 ~~~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   83 (251)
T PRK12826          4 LEGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAAGGKARARQVDVRDRAALKAAVAAGVEDFGR   83 (251)
T ss_pred             CCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence            3457999999999999999999999999999999986543221    1111001133468888888777664       6


Q ss_pred             CcEEEECCCCCCCC---CCChhhHHHHHHHhhhhHHHHHHHHHcC--CCCCCcEEEEeeeeeeeeCCCCCccccCCCCCC
Q 018503          117 STAVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSG  191 (355)
Q Consensus       117 ~d~vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~  191 (355)
                      +|+|||+++.....   ....+++...++.|+.++.++++++...  ..+.+++|++||...  ++.        ..+..
T Consensus        84 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~ss~~~--~~~--------~~~~~  153 (251)
T PRK12826         84 LDILVANAGIFPLTPFAEMDDEQWERVIDVNLTGTFLLTQAALPALIRAGGGRIVLTSSVAG--PRV--------GYPGL  153 (251)
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechHh--hcc--------CCCCc
Confidence            89999999875321   3345667788999999999999877321  145678999999765  410        11223


Q ss_pred             Chh-HHHHHHHHHHHHhcc---CCCCeEEEEEecEEEeCCCCcccchHHHHHHHhCCCCCCCCcceecccHHHHHHHHHH
Q 018503          192 NDY-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYE  267 (355)
Q Consensus       192 ~~y-~~k~~~~~~~~~~~~---~~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~  267 (355)
                      ..| .+|...+.+...+..   ..+++++++||+.++|+..................++      ..+++++|+|+++..
T Consensus       154 ~~y~~sK~a~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~dva~~~~~  227 (251)
T PRK12826        154 AHYAASKAGLVGFTRALALELAARNITVNSVHPGGVDTPMAGNLGDAQWAEAIAAAIPL------GRLGEPEDIAAAVLF  227 (251)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEeeCCCCcchhhhcCchHHHHHHHhcCCC------CCCcCHHHHHHHHHH
Confidence            457 667655555444332   2489999999999999864322111000111112222      247999999999999


Q ss_pred             HHhCCC---CCCceEecCCC
Q 018503          268 ALSNPS---YRGVINGTAPN  284 (355)
Q Consensus       268 ~~~~~~---~~~~~~i~~~~  284 (355)
                      ++..+.   .+.+|++.+|.
T Consensus       228 l~~~~~~~~~g~~~~~~~g~  247 (251)
T PRK12826        228 LASDEARYITGQTLPVDGGA  247 (251)
T ss_pred             HhCccccCcCCcEEEECCCc
Confidence            887643   35588888765

>PRK08263 short chain dehydrogenase; Provisional

Probab=99.84  E-value=1.7e-19  Score=157.83  Aligned_cols=233  Identities=12%  Similarity=0.001  Sum_probs=157.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCC-CCccCCCeeecCCcchhhhcC-------CCcEE
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGK-KTRFFPGVMIAEEPQWRDCIQ-------GSTAV  120 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~~-------~~d~v  120 (355)
                      ++++|+||||+|+||++++++|+++|++|++++|+.+......... .......+|+.|.+++.++++       ++|+|
T Consensus         2 ~~k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~v   81 (275)
T PRK08263          2 MEKVWFITGASRGFGRAWTEAALERGDRVVATARDTATLADLAEKYGDRLLPLALDVTDRAAVFAAVETAVEHFGRLDIV   81 (275)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhccCCeeEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            3468999999999999999999999999999999876543322110 001133578888887765543       57999


Q ss_pred             EECCCCCCC---CCCChhhHHHHHHHhhhhHHHHHHHH----HcCCCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCCh
Q 018503          121 VNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLI----NESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGND  193 (355)
Q Consensus       121 i~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~----~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~~  193 (355)
                      ||+||....   .....+.+...+++|+.++..+++++    ++  .+.+++|++||...  +...         +....
T Consensus        82 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~~~~~iv~vsS~~~--~~~~---------~~~~~  148 (275)
T PRK08263         82 VNNAGYGLFGMIEEVTESEARAQIDTNFFGALWVTQAVLPYLRE--QRSGHIIQISSIGG--ISAF---------PMSGI  148 (275)
T ss_pred             EECCCCccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHh--cCCCEEEEEcChhh--cCCC---------CCccH
Confidence            999997533   23355677889999999988887765    44  46678999999766  4321         22345


Q ss_pred             h-HHHHHHHHHHHHhcc---CCCCeEEEEEecEEEeCCCCcc-------cchHHHHHHHhCCCCCCCCcceec-ccHHHH
Q 018503          194 Y-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGAL-------AKMIPLFMMFAGGPLGSGQQWFSW-IHLDDI  261 (355)
Q Consensus       194 y-~~k~~~~~~~~~~~~---~~~~~~~i~Rp~~i~G~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~-i~v~Dv  261 (355)
                      | .+|...+.+...+..   ..|++++++||+.+..+..+..       ..+.......     ........+ ++.+|+
T Consensus       149 Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~p~dv  223 (275)
T PRK08263        149 YHASKWALEGMSEALAQEVAEFGIKVTLVEPGGYSTDWAGTSAKRATPLDAYDTLREEL-----AEQWSERSVDGDPEAA  223 (275)
T ss_pred             HHHHHHHHHHHHHHHHHHhhhhCcEEEEEecCCccCCccccccccCCCchhhhhHHHHH-----HHHHHhccCCCCHHHH
Confidence            7 777666655554443   3589999999998876543210       0011110000     000111235 889999


Q ss_pred             HHHHHHHHhCCCCCCceEecC-CCccCHHHHHHHHHHHh
Q 018503          262 VNLIYEALSNPSYRGVINGTA-PNPVRLAEMCDHLGNVL  299 (355)
Q Consensus       262 a~~~~~~~~~~~~~~~~~i~~-~~~~s~~el~~~i~~~~  299 (355)
                      |++++.+++.+...+.|.+++ ++++++.++.+.+.+.-
T Consensus       224 a~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  262 (275)
T PRK08263        224 AEALLKLVDAENPPLRLFLGSGVLDLAKADYERRLATWE  262 (275)
T ss_pred             HHHHHHHHcCCCCCeEEEeCchHHHHHHHHHHHHHHHHH
Confidence            999999999876566555554 46789999888888853

>PRK05875 short chain dehydrogenase; Provisional

Probab=99.83  E-value=3.2e-19  Score=156.33  Aligned_cols=237  Identities=19%  Similarity=0.117  Sum_probs=159.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCC------CCCccCCCeeecCCcchhhhcC-------
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG------KKTRFFPGVMIAEEPQWRDCIQ-------  115 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~------~~~~~~~~~d~~~~~~~~~~~~-------  115 (355)
                      ..++|+||||+|+||+++++.|+++|++|++++|+.+........      ........+|+.|++++.++++       
T Consensus         6 ~~k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   85 (276)
T PRK05875          6 QDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAATAWHG   85 (276)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            357999999999999999999999999999999987553322110      0000123468888887776664       


Q ss_pred             CCcEEEECCCCCCC----CCCChhhHHHHHHHhhhhHHHHHHHHHcC--CCCCCcEEEEeeeeeeeeCCCCCccccCCCC
Q 018503          116 GSTAVVNLAGTPIG----TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSP  189 (355)
Q Consensus       116 ~~d~vi~~a~~~~~----~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~  189 (355)
                      ++|++||+||....    .....+.....+++|+.++..+++++...  ..+..+++++||...  +..         .+
T Consensus        86 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~sS~~~--~~~---------~~  154 (276)
T PRK05875         86 RLHGVVHCAGGSETIGPITQIDSDAWRRTVDLNVNGTMYVLKHAARELVRGGGGSFVGISSIAA--SNT---------HR  154 (276)
T ss_pred             CCCEEEECCCcccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhh--cCC---------CC
Confidence            68999999985311    12344556788899999999998766441  124468999999765  321         12


Q ss_pred             CCChh-HHHHHHHHHHHHhccC---CCCeEEEEEecEEEeCCCCcccchHHHH-HHHhCCCCCCCCcceecccHHHHHHH
Q 018503          190 SGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLF-MMFAGGPLGSGQQWFSWIHLDDIVNL  264 (355)
Q Consensus       190 ~~~~y-~~k~~~~~~~~~~~~~---~~~~~~i~Rp~~i~G~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~v~Dva~~  264 (355)
                      ....| .+|...+.....+..+   .+++++++||+.+.++............ ......+      ...+++++|+|++
T Consensus       155 ~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~dva~~  228 (276)
T PRK05875        155 WFGAYGVTKSAVDHLMKLAADELGPSWVRVNSIRPGLIRTDLVAPITESPELSADYRACTP------LPRVGEVEDVANL  228 (276)
T ss_pred             CCcchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCccCCccccccccCHHHHHHHHcCCC------CCCCcCHHHHHHH
Confidence            34567 7787777666655443   4799999999988766432111100111 1111111      2346789999999


Q ss_pred             HHHHHhCCC---CCCceEecCCCcc----CHHHHHHHHHHHhCCC
Q 018503          265 IYEALSNPS---YRGVINGTAPNPV----RLAEMCDHLGNVLGRP  302 (355)
Q Consensus       265 ~~~~~~~~~---~~~~~~i~~~~~~----s~~el~~~i~~~~g~~  302 (355)
                      +..++..+.   .+.+|++++++.+    +..|+++.+.+..+..
T Consensus       229 ~~~l~~~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~  273 (276)
T PRK05875        229 AMFLLSDAASWITGQVINVDGGHMLRRGPDFSSMLEPVFGADGLR  273 (276)
T ss_pred             HHHHcCchhcCcCCCEEEECCCeeccCCccHHHHHHHHhhHHHHh
Confidence            999998764   2558999988765    7788887777665543

>COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]

Probab=99.83  E-value=9.1e-20  Score=157.68  Aligned_cols=240  Identities=19%  Similarity=0.203  Sum_probs=152.8

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhCC-CeEEEEecCCchhhc---cCCCCC------CccCCC-----eeec------CCcc
Q 018503           51 MTVSVTGATGFIGRRLVQRLQADN-HQVRVLTRSRSKAEL---IFPGKK------TRFFPG-----VMIA------EEPQ  109 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~---~~~~~~------~~~~~~-----~d~~------~~~~  109 (355)
                      ++||+||||||+|++|+..|+.+- .+|+|++|..+....   +.....      +....+     .|+.      +...
T Consensus         1 ~~vlLTGATGFLG~yLl~eLL~~~~~kv~cLVRA~s~E~a~~RL~~~~~~~~~~~e~~~~ri~vv~gDl~e~~lGL~~~~   80 (382)
T COG3320           1 RNVLLTGATGFLGAYLLLELLDRSDAKVICLVRAQSDEAALARLEKTFDLYRHWDELSADRVEVVAGDLAEPDLGLSERT   80 (382)
T ss_pred             CeEEEecCchHhHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHHhhhhhhhhhhhcceEEEEecccccccCCCCHHH
Confidence            479999999999999999999874 599999998763211   111000      000111     2333      4447


Q ss_pred             hhhhcCCCcEEEECCCCCCCCCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCCCC--ccccCC
Q 018503          110 WRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSET--EVFDES  187 (355)
Q Consensus       110 ~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~~--~~~~e~  187 (355)
                      +.++.+.+|.|||+|+..+    ...+..++...|+.|+..+++.|..  ...|.++|+||.++..+.....  ...++.
T Consensus        81 ~~~La~~vD~I~H~gA~Vn----~v~pYs~L~~~NVlGT~evlrLa~~--gk~Kp~~yVSsisv~~~~~~~~~~~~~~~~  154 (382)
T COG3320          81 WQELAENVDLIIHNAALVN----HVFPYSELRGANVLGTAEVLRLAAT--GKPKPLHYVSSISVGETEYYSNFTVDFDEI  154 (382)
T ss_pred             HHHHhhhcceEEecchhhc----ccCcHHHhcCcchHhHHHHHHHHhc--CCCceeEEEeeeeeccccccCCCccccccc
Confidence            7788888999999999752    2334568889999999999999999  6788999999999943322111  112211


Q ss_pred             C-------CCCChh-HHHHHHHHHHHHhccCCCCeEEEEEecEEEeCCC-Cc--ccchHHHH--HHHhCCCCCCCCccee
Q 018503          188 S-------PSGNDY-LAEVCREWEGTALKVNKDVRLALIRIGIVLGKDG-GA--LAKMIPLF--MMFAGGPLGSGQQWFS  254 (355)
Q Consensus       188 ~-------~~~~~y-~~k~~~~~~~~~~~~~~~~~~~i~Rp~~i~G~~~-~~--~~~~~~~~--~~~~~~~~~~~~~~~~  254 (355)
                      +       .....| .+|+..|.+....... |++++|+|||.|.|+.. +.  ...+...+  ...+-+.+.......+
T Consensus       155 ~~~~~~~~~~~~GY~~SKwvaE~Lvr~A~~r-GLpv~I~Rpg~I~gds~tG~~n~~D~~~Rlv~~~~~lg~~P~~~~~~~  233 (382)
T COG3320         155 SPTRNVGQGLAGGYGRSKWVAEKLVREAGDR-GLPVTIFRPGYITGDSRTGALNTRDFLTRLVLGLLQLGIAPDSEYSLD  233 (382)
T ss_pred             cccccccCccCCCcchhHHHHHHHHHHHhhc-CCCeEEEecCeeeccCccCccccchHHHHHHHHHHHhCCCCCcccchh
Confidence            1       134678 9999999999888876 99999999999999864 22  12222222  1112222222233344


Q ss_pred             cccHHHHHH-----------HHHHHHhCCC-CCCceE-ecCCCccCHHHHHHHHHH
Q 018503          255 WIHLDDIVN-----------LIYEALSNPS-YRGVIN-GTAPNPVRLAEMCDHLGN  297 (355)
Q Consensus       255 ~i~v~Dva~-----------~~~~~~~~~~-~~~~~~-i~~~~~~s~~el~~~i~~  297 (355)
                      .+.++++++           ++..+...+. ..+.|+ ..-|..+...++.+-+.+
T Consensus       234 ~~p~~~v~~~v~~~~~~~~~~~~~l~~~~~~~f~~~~~~~~~~~i~l~~~~~w~~~  289 (382)
T COG3320         234 MLPVDHVARAVVAPSVQVAEAIAALGAHSDIRFNQLHMLTHPDEIGLDEYVDWLIS  289 (382)
T ss_pred             hCccceeeEEeehhhhhHHHHHHHhccCccchhhheecccCCCccchhHHHHhHhh
Confidence            444444333           3333332222 223444 223677899999888887

>PRK09135 pteridine reductase; Provisional

Probab=99.83  E-value=3.9e-19  Score=153.33  Aligned_cols=221  Identities=14%  Similarity=0.114  Sum_probs=142.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchh-hccC----CC-CCCccCCCeeecCCcchhhhcC-------
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKA-ELIF----PG-KKTRFFPGVMIAEEPQWRDCIQ-------  115 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~----~~-~~~~~~~~~d~~~~~~~~~~~~-------  115 (355)
                      +.++||||||+|+||++++++|+++|++|++++|+.... ....    .. ........+|+.|.+++.++++       
T Consensus         5 ~~~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   84 (249)
T PRK09135          5 SAKVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNALRPGSAAALQADLLDPDALPELVAACVAAFG   84 (249)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            346899999999999999999999999999999874331 1110    00 0001134578888888776664       


Q ss_pred             CCcEEEECCCCCCCC---CCChhhHHHHHHHhhhhHHHHHHHHHcC-CCCCCcEEEEeeeeeeeeCCCCCccccCCCCCC
Q 018503          116 GSTAVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES-PEGVRPSVLVSATALGYYGTSETEVFDESSPSG  191 (355)
Q Consensus       116 ~~d~vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~  191 (355)
                      ++|+|||+||.....   ....+.+...+++|+.++.++++++... ......++.+++.    .+.       ...++.
T Consensus        85 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~~~~~~~----~~~-------~~~~~~  153 (249)
T PRK09135         85 RLDALVNNASSFYPTPLGSITEAQWDDLFASNLKAPFFLSQAAAPQLRKQRGAIVNITDI----HAE-------RPLKGY  153 (249)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhchhHHHHHHHHHHHHhhCCeEEEEEeCh----hhc-------CCCCCc
Confidence            579999999964322   1234556788999999999999988642 0122344444432    211       112334


Q ss_pred             Chh-HHHHHHHHHHHHhccC--CCCeEEEEEecEEEeCCCCc-ccchHHHHHHHhCCCCCCCCcceecccHHHHHHHHHH
Q 018503          192 NDY-LAEVCREWEGTALKVN--KDVRLALIRIGIVLGKDGGA-LAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYE  267 (355)
Q Consensus       192 ~~y-~~k~~~~~~~~~~~~~--~~~~~~i~Rp~~i~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~  267 (355)
                      ..| .+|...+.....+..+  .+++++++||+.++|+.... +..... .....+.++      ..+.+++|+|+++..
T Consensus       154 ~~Y~~sK~~~~~~~~~l~~~~~~~i~~~~v~pg~~~~~~~~~~~~~~~~-~~~~~~~~~------~~~~~~~d~a~~~~~  226 (249)
T PRK09135        154 PVYCAAKAALEMLTRSLALELAPEVRVNAVAPGAILWPEDGNSFDEEAR-QAILARTPL------KRIGTPEDIAEAVRF  226 (249)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHCCCCeEEEEEeccccCccccccCCHHHH-HHHHhcCCc------CCCcCHHHHHHHHHH
Confidence            568 8888777776655543  36999999999999987532 111111 111122221      123458999999977


Q ss_pred             HHhCCC--CCCceEecCCCccC
Q 018503          268 ALSNPS--YRGVINGTAPNPVR  287 (355)
Q Consensus       268 ~~~~~~--~~~~~~i~~~~~~s  287 (355)
                      ++....  .+.+|++++++.++
T Consensus       227 ~~~~~~~~~g~~~~i~~g~~~~  248 (249)
T PRK09135        227 LLADASFITGQILAVDGGRSLT  248 (249)
T ss_pred             HcCccccccCcEEEECCCeecc
Confidence            765432  35589999988655

>PRK06180 short chain dehydrogenase; Provisional

Probab=99.83  E-value=8.9e-19  Score=153.47  Aligned_cols=220  Identities=14%  Similarity=-0.006  Sum_probs=143.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCC-CccCCCeeecCCcchhhhcC-------CCcEE
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKK-TRFFPGVMIAEEPQWRDCIQ-------GSTAV  120 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~d~~~~~~~~~~~~-------~~d~v  120 (355)
                      ++++|+||||+|+||++++++|+++|++|++++|+.+....+..... ......+|+.|.+++.++++       ++|+|
T Consensus         3 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~~~d~v   82 (277)
T PRK06180          3 SMKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAARADFEALHPDRALARLLDVTDFDAIDAVVADAEATFGPIDVL   82 (277)
T ss_pred             CCCEEEEecCCChHHHHHHHHHHhCcCEEEEEeCCHHHHHHHHhhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            35689999999999999999999999999999998766543322110 01133568888888776664       58999


Q ss_pred             EECCCCCCC---CCCChhhHHHHHHHhhhhHHHHHHHHHcC--CCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCChh-
Q 018503          121 VNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-  194 (355)
Q Consensus       121 i~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~~y-  194 (355)
                      ||+||....   .....+.....+++|+.++.++++++...  ..+.+++|++||...  +..         .+....| 
T Consensus        83 v~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~iSS~~~--~~~---------~~~~~~Y~  151 (277)
T PRK06180         83 VNNAGYGHEGAIEESPLAEMRRQFEVNVFGAVAMTKAVLPGMRARRRGHIVNITSMGG--LIT---------MPGIGYYC  151 (277)
T ss_pred             EECCCccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCCEEEEEecccc--cCC---------CCCcchhH
Confidence            999997432   22334556778999999999999885321  145678999999765  321         1234567 


Q ss_pred             HHHHHHHHHHHHhcc---CCCCeEEEEEecEEEeCCCCc--------ccchHHHHHHHh-CCCCCCCCcceecccHHHHH
Q 018503          195 LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGA--------LAKMIPLFMMFA-GGPLGSGQQWFSWIHLDDIV  262 (355)
Q Consensus       195 ~~k~~~~~~~~~~~~---~~~~~~~i~Rp~~i~G~~~~~--------~~~~~~~~~~~~-~~~~~~~~~~~~~i~v~Dva  262 (355)
                      .+|...+.....+..   ..|++++++||+.+.++..+.        ...+...+.... .....   ....+..++|+|
T Consensus       152 ~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~dva  228 (277)
T PRK06180        152 GSKFALEGISESLAKEVAPFGIHVTAVEPGSFRTDWAGRSMVRTPRSIADYDALFGPIRQAREAK---SGKQPGDPAKAA  228 (277)
T ss_pred             HHHHHHHHHHHHHHHHhhhhCcEEEEEecCCcccCccccccccCCCCcHhHHHHHHHHHHHHHhh---ccCCCCCHHHHH
Confidence            777666655554433   258999999999997653211        011111110000 00001   112356899999


Q ss_pred             HHHHHHHhCCCCCCceEecC
Q 018503          263 NLIYEALSNPSYRGVINGTA  282 (355)
Q Consensus       263 ~~~~~~~~~~~~~~~~~i~~  282 (355)
                      ++++.++..+.....|.++.
T Consensus       229 ~~~~~~l~~~~~~~~~~~g~  248 (277)
T PRK06180        229 QAILAAVESDEPPLHLLLGS  248 (277)
T ss_pred             HHHHHHHcCCCCCeeEeccH
Confidence            99999999776444554443

>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase

Probab=99.82  E-value=3.6e-19  Score=154.10  Aligned_cols=218  Identities=17%  Similarity=0.076  Sum_probs=142.8

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCC----CCCccCCCeeecCCcchhhh-------cCCCcE
Q 018503           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG----KKTRFFPGVMIAEEPQWRDC-------IQGSTA  119 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~----~~~~~~~~~d~~~~~~~~~~-------~~~~d~  119 (355)
                      ++||||||+|++|++++++|+++|++|++++|+......+...    ........+|+.|.+++.++       +.++|+
T Consensus         2 ~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~   81 (255)
T TIGR01963         2 KTALVTGAASGIGLAIALALAAAGANVVVNDLGEAGAEAAAKVATDAGGSVIYLVADVTKEDEIADMIAAAAAEFGGLDI   81 (255)
T ss_pred             CEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcCCCCE
Confidence            5799999999999999999999999999999987654322110    00011334688888855443       346899


Q ss_pred             EEECCCCCCC---CCCChhhHHHHHHHhhhhHHHHHHHH----HcCCCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCC
Q 018503          120 VVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLI----NESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGN  192 (355)
Q Consensus       120 vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~----~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~  192 (355)
                      |||+++....   ...........++.|+.++..+++++    ++  .+.+++|++||...  +...         +...
T Consensus        82 vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~--~~~~~~v~~ss~~~--~~~~---------~~~~  148 (255)
T TIGR01963        82 LVNNAGIQHVAPIEEFPPEDWDRIIAIMLTSAFHTIRAALPHMKK--QGWGRIINIASAHG--LVAS---------PFKS  148 (255)
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh--cCCeEEEEEcchhh--cCCC---------CCCc
Confidence            9999987532   22344556777889999988887776    44  56789999998765  3211         1234


Q ss_pred             hh-HHHHHHHHHHHHhcc---CCCCeEEEEEecEEEeCCCCcccchHHHHHHHhCC--------CCCCCCcceecccHHH
Q 018503          193 DY-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGG--------PLGSGQQWFSWIHLDD  260 (355)
Q Consensus       193 ~y-~~k~~~~~~~~~~~~---~~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~i~v~D  260 (355)
                      .| .+|...+.....+..   ..+++++++||+.++++....   .........+.        .+..+...+++++++|
T Consensus       149 ~y~~sk~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  225 (255)
T TIGR01963       149 AYVAAKHGLIGLTKVLALEVAAHGITVNAICPGYVRTPLVEK---QIADQAKTRGIPEEQVIREVMLPGQPTKRFVTVDE  225 (255)
T ss_pred             hhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccHHHHH---HHHhhhcccCCCchHHHHHHHHccCccccCcCHHH
Confidence            56 566554444433322   248999999999999874211   00000000000        0112344567999999


Q ss_pred             HHHHHHHHHhCCC---CCCceEecCCC
Q 018503          261 IVNLIYEALSNPS---YRGVINGTAPN  284 (355)
Q Consensus       261 va~~~~~~~~~~~---~~~~~~i~~~~  284 (355)
                      +|++++.++..+.   .+..|++.++.
T Consensus       226 ~a~~~~~~~~~~~~~~~g~~~~~~~g~  252 (255)
T TIGR01963       226 VAETALFLASDAAAGITGQAIVLDGGW  252 (255)
T ss_pred             HHHHHHHHcCccccCccceEEEEcCcc
Confidence            9999999998642   34578888764

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.

>PRK07067 sorbitol dehydrogenase; Provisional

Probab=99.82  E-value=3.5e-19  Score=154.35  Aligned_cols=227  Identities=11%  Similarity=0.026  Sum_probs=151.2

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCC-CCccCCCeeecCCcchhhhcC-------CCcEEE
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGK-KTRFFPGVMIAEEPQWRDCIQ-------GSTAVV  121 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~~-------~~d~vi  121 (355)
                      .++++||||+|+||+++++.|+++|++|++++|+.+......... .......+|+.|.+++.++++       .+|++|
T Consensus         6 ~~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li   85 (257)
T PRK07067          6 GKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEIGPAAIAVSLDVTRQDSIDRIVAAAVERFGGIDILF   85 (257)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            468999999999999999999999999999999876544322110 001134578888887776654       589999


Q ss_pred             ECCCCCCC---CCCChhhHHHHHHHhhhhHHHHHHHHHcC--C-CCCCcEEEEeeeeeeeeCCCCCccccCCCCCCChh-
Q 018503          122 NLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--P-EGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-  194 (355)
Q Consensus       122 ~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~-~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~~y-  194 (355)
                      |+|+....   .....+.+...+++|+.++..+++++...  . ....++|++||.... ++          .+....| 
T Consensus        86 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~-~~----------~~~~~~Y~  154 (257)
T PRK07067         86 NNAALFDMAPILDISRDSYDRLFAVNVKGLFFLMQAVARHMVEQGRGGKIINMASQAGR-RG----------EALVSHYC  154 (257)
T ss_pred             ECCCcCCCCCcccCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCCCcEEEEeCCHHhC-CC----------CCCCchhh
Confidence            99986432   22345667788999999999999988541  0 123579999986431 32          1234567 


Q ss_pred             HHHHHHHHHHHHhcc---CCCCeEEEEEecEEEeCCCCcccchHHHHH----HHhCCCCCCCCcceecccHHHHHHHHHH
Q 018503          195 LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALAKMIPLFM----MFAGGPLGSGQQWFSWIHLDDIVNLIYE  267 (355)
Q Consensus       195 ~~k~~~~~~~~~~~~---~~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~i~v~Dva~~~~~  267 (355)
                      .+|...+.+.+.+..   ..++++++++|+.++++.............    ......++.......+++.+|+|++++.
T Consensus       155 ~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~  234 (257)
T PRK07067        155 ATKAAVISYTQSAALALIRHGINVNAIAPGVVDTPMWDQVDALFARYENRPPGEKKRLVGEAVPLGRMGVPDDLTGMALF  234 (257)
T ss_pred             hhHHHHHHHHHHHHHHhcccCeEEEEEeeCcccchhhhhhhhhhhhccCCCHHHHHHHHhhcCCCCCccCHHHHHHHHHH
Confidence            777666655554433   358999999999999874321111110000    0000011222334578999999999999


Q ss_pred             HHhCCC---CCCceEecCCCccC
Q 018503          268 ALSNPS---YRGVINGTAPNPVR  287 (355)
Q Consensus       268 ~~~~~~---~~~~~~i~~~~~~s  287 (355)
                      ++..+.   .+.+|++.+|+.+|
T Consensus       235 l~s~~~~~~~g~~~~v~gg~~~~  257 (257)
T PRK07067        235 LASADADYIVAQTYNVDGGNWMS  257 (257)
T ss_pred             HhCcccccccCcEEeecCCEeCC
Confidence            998654   35689998887553

>PRK07775 short chain dehydrogenase; Provisional

Probab=99.82  E-value=9.5e-19  Score=153.00  Aligned_cols=220  Identities=17%  Similarity=0.148  Sum_probs=144.5

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCC----CCCCccCCCeeecCCcchhhhcC-------C
Q 018503           48 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP----GKKTRFFPGVMIAEEPQWRDCIQ-------G  116 (355)
Q Consensus        48 ~~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~~d~~~~~~~~~~~~-------~  116 (355)
                      +.+++++||||+|+||++++++|+++|++|++++|+.........    .........+|+.+.+++.++++       +
T Consensus         8 ~~~~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   87 (274)
T PRK07775          8 PDRRPALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRADGGEAVAFPLDVTDPDSVKSFVAQAEEALGE   87 (274)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence            344689999999999999999999999999999997654332211    01111123468888888776554       5


Q ss_pred             CcEEEECCCCCCCC---CCChhhHHHHHHHhhhhHHHHHHHHHcC--CCCCCcEEEEeeeeeeeeCCCCCccccCCCCCC
Q 018503          117 STAVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSG  191 (355)
Q Consensus       117 ~d~vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~  191 (355)
                      +|+|||+||.....   ....+.....+++|+.++.++++++...  ..+..++|++||...  |...         +..
T Consensus        88 id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~g~iv~isS~~~--~~~~---------~~~  156 (274)
T PRK07775         88 IEVLVSGAGDTYFGKLHEISTEQFESQVQIHLVGANRLATAVLPGMIERRRGDLIFVGSDVA--LRQR---------PHM  156 (274)
T ss_pred             CCEEEECCCcCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECChHh--cCCC---------CCc
Confidence            79999999974321   2234556677899999999998876421  134568999999766  4321         223


Q ss_pred             Chh-HHHHHHHHHHHHhccC---CCCeEEEEEecEEEeCCC-Ccccc-hHHHHHHHhCCCCCCCCcceecccHHHHHHHH
Q 018503          192 NDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDG-GALAK-MIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLI  265 (355)
Q Consensus       192 ~~y-~~k~~~~~~~~~~~~~---~~~~~~i~Rp~~i~G~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~  265 (355)
                      ..| .+|...+.+...+..+   .|++++++|||.+.++.. ..... ..........  .+ ......+++++|+|+++
T Consensus       157 ~~Y~~sK~a~~~l~~~~~~~~~~~gi~v~~v~pG~~~t~~~~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~~~dva~a~  233 (274)
T PRK07775        157 GAYGAAKAGLEAMVTNLQMELEGTGVRASIVHPGPTLTGMGWSLPAEVIGPMLEDWAK--WG-QARHDYFLRASDLARAI  233 (274)
T ss_pred             chHHHHHHHHHHHHHHHHHHhcccCeEEEEEeCCcccCcccccCChhhhhHHHHHHHH--hc-ccccccccCHHHHHHHH
Confidence            457 7787777666655433   489999999998765421 11111 1111111110  01 12235689999999999


Q ss_pred             HHHHhCCCCCCceEec
Q 018503          266 YEALSNPSYRGVINGT  281 (355)
Q Consensus       266 ~~~~~~~~~~~~~~i~  281 (355)
                      +.+++++....+||+.
T Consensus       234 ~~~~~~~~~~~~~~~~  249 (274)
T PRK07775        234 TFVAETPRGAHVVNME  249 (274)
T ss_pred             HHHhcCCCCCCeeEEe
Confidence            9999876544477775

>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA

Probab=99.82  E-value=1.4e-20  Score=160.51  Aligned_cols=218  Identities=21%  Similarity=0.229  Sum_probs=141.1

Q ss_pred             EEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhh--ccCCCCCCccCCCeeecCCcchhhhcCCCcEEEECCCCCCCC
Q 018503           53 VSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAE--LIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTPIGT  130 (355)
Q Consensus        53 IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~--~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~~~~~  130 (355)
                      |+|+||||.+|+++++.|++.+++|++++|+.++..  .+...+.  ....+|+.|.+++.++++++|+||.+.+...  
T Consensus         1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~~~~~~~~l~~~g~--~vv~~d~~~~~~l~~al~g~d~v~~~~~~~~--   76 (233)
T PF05368_consen    1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDPSSDRAQQLQALGA--EVVEADYDDPESLVAALKGVDAVFSVTPPSH--   76 (233)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTGCEEEEESSSHHHHHHHHHHTTT--EEEES-TT-HHHHHHHHTTCSEEEEESSCSC--
T ss_pred             CEEECCccHHHHHHHHHHHhCCCCcEEEEeccchhhhhhhhcccc--eEeecccCCHHHHHHHHcCCceEEeecCcch--
Confidence            799999999999999999999999999999985422  2221111  1335788899999999999999999877431  


Q ss_pred             CCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCChhHHHHHHHHHHHHhccC
Q 018503          131 RWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDYLAEVCREWEGTALKVN  210 (355)
Q Consensus       131 ~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~~y~~k~~~~~~~~~~~~~  210 (355)
                                 ........++++++++  .++++||+.|....  +    . ......|..+.|..|..    .+.+.++
T Consensus        77 -----------~~~~~~~~~li~Aa~~--agVk~~v~ss~~~~--~----~-~~~~~~p~~~~~~~k~~----ie~~l~~  132 (233)
T PF05368_consen   77 -----------PSELEQQKNLIDAAKA--AGVKHFVPSSFGAD--Y----D-ESSGSEPEIPHFDQKAE----IEEYLRE  132 (233)
T ss_dssp             -----------CCHHHHHHHHHHHHHH--HT-SEEEESEESSG--T----T-TTTTSTTHHHHHHHHHH----HHHHHHH
T ss_pred             -----------hhhhhhhhhHHHhhhc--cccceEEEEEeccc--c----c-ccccccccchhhhhhhh----hhhhhhh
Confidence                       1234556789999999  78999986442222  1    1 00011111122233322    2222333


Q ss_pred             CCCeEEEEEecEEEeCCCCcccchHHHHHHHhCC---CC-CCCCcceec-ccHHHHHHHHHHHHhCCCCC--C-ceEecC
Q 018503          211 KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGG---PL-GSGQQWFSW-IHLDDIVNLIYEALSNPSYR--G-VINGTA  282 (355)
Q Consensus       211 ~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~~~~---~~-~~~~~~~~~-i~v~Dva~~~~~~~~~~~~~--~-~~~i~~  282 (355)
                      .+++++++||+.++......+   .+........   .+ ++++....+ ++.+|+|++++.++..+...  + .+.+++
T Consensus       133 ~~i~~t~i~~g~f~e~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvg~~va~il~~p~~~~~~~~~~~~~  209 (233)
T PF05368_consen  133 SGIPYTIIRPGFFMENLLPPF---APVVDIKKSKDVVTLPGPGNQKAVPVTDTRDVGRAVAAILLDPEKHNNGKTIFLAG  209 (233)
T ss_dssp             CTSEBEEEEE-EEHHHHHTTT---HHTTCSCCTSSEEEEETTSTSEEEEEEHHHHHHHHHHHHHHSGGGTTEEEEEEEGG
T ss_pred             ccccceeccccchhhhhhhhh---cccccccccceEEEEccCCCccccccccHHHHHHHHHHHHcChHHhcCCEEEEeCC
Confidence            499999999998876531111   1100011111   11 555655566 49999999999999987633  3 565654


Q ss_pred             CCccCHHHHHHHHHHHhCCC
Q 018503          283 PNPVRLAEMCDHLGNVLGRP  302 (355)
Q Consensus       283 ~~~~s~~el~~~i~~~~g~~  302 (355)
                       +.+|+.|+++.+++.+|++
T Consensus       210 -~~~t~~eia~~~s~~~G~~  228 (233)
T PF05368_consen  210 -ETLTYNEIAAILSKVLGKK  228 (233)
T ss_dssp             -GEEEHHHHHHHHHHHHTSE
T ss_pred             -CCCCHHHHHHHHHHHHCCc
Confidence             7799999999999999987

NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....

>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional

Probab=99.81  E-value=4.4e-19  Score=153.82  Aligned_cols=219  Identities=15%  Similarity=0.041  Sum_probs=140.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCC----CCCccCCCeeecCCcchhhhcC-------CC
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG----KKTRFFPGVMIAEEPQWRDCIQ-------GS  117 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~----~~~~~~~~~d~~~~~~~~~~~~-------~~  117 (355)
                      .+++|+||||+|++|++++++|+++|++|++++|+.+........    ........+|+.|++++.++++       ++
T Consensus         3 ~~~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~   82 (258)
T PRK12429          3 KGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTDEEAINAGIDYAVETFGGV   82 (258)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            346899999999999999999999999999999987654332111    0001134578888888776664       68


Q ss_pred             cEEEECCCCCCCC---CCChhhHHHHHHHhhhhHHHH----HHHHHcCCCCCCcEEEEeeeeeeeeCCCCCccccCCCCC
Q 018503          118 TAVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKV----VDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPS  190 (355)
Q Consensus       118 d~vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l----~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~  190 (355)
                      |+|||+|+.....   ....+.....+++|+.++..+    ++++++  .+.++||++||.... ++.          +.
T Consensus        83 d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~~~~~iv~iss~~~~-~~~----------~~  149 (258)
T PRK12429         83 DILVNNAGIQHVAPIEDFPTEKWKKMIAIMLDGAFLTTKAALPIMKA--QGGGRIINMASVHGL-VGS----------AG  149 (258)
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHhhcchhhHHHHHHHHHHHHh--cCCeEEEEEcchhhc-cCC----------CC
Confidence            9999999864332   223445567788999995544    444455  567899999997652 221          22


Q ss_pred             CChh-HHHHHHHHHHHHhc---cCCCCeEEEEEecEEEeCCCCcccchHHHHHHHhCC--------CCCCCCcceecccH
Q 018503          191 GNDY-LAEVCREWEGTALK---VNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGG--------PLGSGQQWFSWIHL  258 (355)
Q Consensus       191 ~~~y-~~k~~~~~~~~~~~---~~~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~i~v  258 (355)
                      ...| .+|...+.+...+.   ...++.++++||+.++++.....   ........+.        .+......+.++++
T Consensus       150 ~~~y~~~k~a~~~~~~~l~~~~~~~~i~v~~~~pg~v~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (258)
T PRK12429        150 KAAYVSAKHGLIGLTKVVALEGATHGVTVNAICPGYVDTPLVRKQ---IPDLAKERGISEEEVLEDVLLPLVPQKRFTTV  226 (258)
T ss_pred             cchhHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCcchhhhhh---hhhhccccCCChHHHHHHHHhccCCccccCCH
Confidence            3445 55544443333322   23489999999999998753210   0000000000        01112234579999


Q ss_pred             HHHHHHHHHHHhCCC---CCCceEecCC
Q 018503          259 DDIVNLIYEALSNPS---YRGVINGTAP  283 (355)
Q Consensus       259 ~Dva~~~~~~~~~~~---~~~~~~i~~~  283 (355)
                      +|+|+++..++....   .+..|++.+|
T Consensus       227 ~d~a~~~~~l~~~~~~~~~g~~~~~~~g  254 (258)
T PRK12429        227 EEIADYALFLASFAAKGVTGQAWVVDGG  254 (258)
T ss_pred             HHHHHHHHHHcCccccCccCCeEEeCCC
Confidence            999999999987643   2457877765

>PRK07074 short chain dehydrogenase; Provisional

Probab=99.81  E-value=9.4e-19  Score=151.68  Aligned_cols=232  Identities=15%  Similarity=0.070  Sum_probs=154.8

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCC--CCCccCCCeeecCCcchhhhcC-------CCcEE
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG--KKTRFFPGVMIAEEPQWRDCIQ-------GSTAV  120 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~--~~~~~~~~~d~~~~~~~~~~~~-------~~d~v  120 (355)
                      +++++||||+|+||++++++|+++|++|++++|+......+...  ........+|+.|.+++.+++.       ++|+|
T Consensus         2 ~k~ilItGat~~iG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~v   81 (257)
T PRK07074          2 KRTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADALGDARFVPVACDLTDAASLAAALANAAAERGPVDVL   81 (257)
T ss_pred             CCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            36899999999999999999999999999999987654322111  0001134578888888876664       48999


Q ss_pred             EECCCCCCCC---CCChhhHHHHHHHhhhhHHHHHHHHHcC--CCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCChh-
Q 018503          121 VNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-  194 (355)
Q Consensus       121 i~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~~y-  194 (355)
                      ||++|.....   ....+.....+.+|+.++..+++++...  ..+.+++|++||...  +..          ...+.| 
T Consensus        82 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~--~~~----------~~~~~y~  149 (257)
T PRK07074         82 VANAGAARAASLHDTTPASWRADNALNLEAAYLCVEAVLEGMLKRSRGAVVNIGSVNG--MAA----------LGHPAYS  149 (257)
T ss_pred             EECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEcchhh--cCC----------CCCcccH
Confidence            9999864321   2334445566789999988888777321  145678999998643  211          012356 


Q ss_pred             HHHHHHHHHHHHhccC---CCCeEEEEEecEEEeCCCCcccc-hHHHHHHHhCCCCCCCCcceecccHHHHHHHHHHHHh
Q 018503          195 LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAK-MIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALS  270 (355)
Q Consensus       195 ~~k~~~~~~~~~~~~~---~~~~~~i~Rp~~i~G~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~  270 (355)
                      .+|...+.....+..+   .+++++.++|+.++++....... ..........     .....++++++|++++++.++.
T Consensus       150 ~sK~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~d~a~~~~~l~~  224 (257)
T PRK07074        150 AAKAGLIHYTKLLAVEYGRFGIRANAVAPGTVKTQAWEARVAANPQVFEELKK-----WYPLQDFATPDDVANAVLFLAS  224 (257)
T ss_pred             HHHHHHHHHHHHHHHHHhHhCeEEEEEEeCcCCcchhhcccccChHHHHHHHh-----cCCCCCCCCHHHHHHHHHHHcC
Confidence            6676666555554432   37999999999998874321100 0111111110     1223579999999999999997


Q ss_pred             CCC---CCCceEecCCCccCHHHHHHHHHHH
Q 018503          271 NPS---YRGVINGTAPNPVRLAEMCDHLGNV  298 (355)
Q Consensus       271 ~~~---~~~~~~i~~~~~~s~~el~~~i~~~  298 (355)
                      ...   .+..+++.+|...+.+|+++.+.+.
T Consensus       225 ~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~~  255 (257)
T PRK07074        225 PAARAITGVCLPVDGGLTAGNREMARTLTLE  255 (257)
T ss_pred             chhcCcCCcEEEeCCCcCcCChhhhhhhccc
Confidence            532   2447788888889999999887653

>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=99.81  E-value=1.2e-18  Score=149.89  Aligned_cols=218  Identities=19%  Similarity=0.139  Sum_probs=144.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCC----CCCCccCCCeeecCCcchhhhcC-------CC
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP----GKKTRFFPGVMIAEEPQWRDCIQ-------GS  117 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~~d~~~~~~~~~~~~-------~~  117 (355)
                      ++|+|+||||+|++|++++++|+++|++|++++|++.+......    .........+|+.|++++.++++       .+
T Consensus         4 ~~~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   83 (246)
T PRK05653          4 QGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAAGGEARVLVFDVSDEAAVRALIEAAVEAFGAL   83 (246)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            34789999999999999999999999999999998765332211    11001133478888887766654       46


Q ss_pred             cEEEECCCCCCC---CCCChhhHHHHHHHhhhhHHHHHHHHHcC--CCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCC
Q 018503          118 TAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGN  192 (355)
Q Consensus       118 d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~  192 (355)
                      |+|||++|....   .....+.....++.|+.++.++++++...  ..+.+++|++||.... ++          .....
T Consensus        84 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~~ss~~~~-~~----------~~~~~  152 (246)
T PRK05653         84 DILVNNAGITRDALLPRMSEEDWDRVIDVNLTGTFNVVRAALPPMIKARYGRIVNISSVSGV-TG----------NPGQT  152 (246)
T ss_pred             CEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhc-cC----------CCCCc
Confidence            999999987432   22344556778899999999998887421  1466899999986541 22          12234


Q ss_pred             hh-HHHHHHHHHHHHhcc---CCCCeEEEEEecEEEeCCCCcccchHHHHHHHhCCCCCCCCcceecccHHHHHHHHHHH
Q 018503          193 DY-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEA  268 (355)
Q Consensus       193 ~y-~~k~~~~~~~~~~~~---~~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~  268 (355)
                      .| .+|...+...+.+..   ..+++++++||+.++++........... ......      ....+++.+|+|+++..+
T Consensus       153 ~y~~sk~~~~~~~~~l~~~~~~~~i~~~~i~pg~~~~~~~~~~~~~~~~-~~~~~~------~~~~~~~~~dva~~~~~~  225 (246)
T PRK05653        153 NYSAAKAGVIGFTKALALELASRGITVNAVAPGFIDTDMTEGLPEEVKA-EILKEI------PLGRLGQPEEVANAVAFL  225 (246)
T ss_pred             HhHhHHHHHHHHHHHHHHHHhhcCeEEEEEEeCCcCCcchhhhhHHHHH-HHHhcC------CCCCCcCHHHHHHHHHHH
Confidence            46 566554444443332   2489999999999998864321111110 111111      124578999999999999


Q ss_pred             HhCCC---CCCceEecCCC
Q 018503          269 LSNPS---YRGVINGTAPN  284 (355)
Q Consensus       269 ~~~~~---~~~~~~i~~~~  284 (355)
                      +....   .+..|++.+|.
T Consensus       226 ~~~~~~~~~g~~~~~~gg~  244 (246)
T PRK05653        226 ASDAASYITGQVIPVNGGM  244 (246)
T ss_pred             cCchhcCccCCEEEeCCCe
Confidence            97533   34488888775

>PRK06914 short chain dehydrogenase; Provisional

Probab=99.81  E-value=4.1e-19  Score=155.92  Aligned_cols=225  Identities=15%  Similarity=0.067  Sum_probs=146.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCC----C--CCccCCCeeecCCcchhh---h---cCC
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG----K--KTRFFPGVMIAEEPQWRD---C---IQG  116 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~----~--~~~~~~~~d~~~~~~~~~---~---~~~  116 (355)
                      +++++|||||+|++|+++++.|+++|++|++++|+++........    .  .......+|+.|++++.+   +   +.+
T Consensus         2 ~~k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~   81 (280)
T PRK06914          2 NKKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHNFQLVLKEIGR   81 (280)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHHHHHHHHhcCC
Confidence            346799999999999999999999999999999987654322110    0  001133568888887654   1   235


Q ss_pred             CcEEEECCCCCCC---CCCChhhHHHHHHHhhhhHHHHHHHH----HcCCCCCCcEEEEeeeeeeeeCCCCCccccCCCC
Q 018503          117 STAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLI----NESPEGVRPSVLVSATALGYYGTSETEVFDESSP  189 (355)
Q Consensus       117 ~d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~----~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~  189 (355)
                      +|+|||+||....   .....+.....+++|+.++.++++++    ++  .+.+++|++||.... ++.          +
T Consensus        82 id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~~~~~iv~vsS~~~~-~~~----------~  148 (280)
T PRK06914         82 IDLLVNNAGYANGGFVEEIPVEEYRKQFETNVFGAISVTQAVLPYMRK--QKSGKIINISSISGR-VGF----------P  148 (280)
T ss_pred             eeEEEECCcccccCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHh--cCCCEEEEECccccc-CCC----------C
Confidence            7999999987432   22344566778889999988888775    44  456789999986541 331          2


Q ss_pred             CCChh-HHHHHHHHHHHHhc---cCCCCeEEEEEecEEEeCCCCcc-----------cchHHHHHHHhCCCCCCCCccee
Q 018503          190 SGNDY-LAEVCREWEGTALK---VNKDVRLALIRIGIVLGKDGGAL-----------AKMIPLFMMFAGGPLGSGQQWFS  254 (355)
Q Consensus       190 ~~~~y-~~k~~~~~~~~~~~---~~~~~~~~i~Rp~~i~G~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~  254 (355)
                      ....| .+|...+.+.+.+.   ...+++++++|||.+.++.....           ..+......... .+  ......
T Consensus       149 ~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~  225 (280)
T PRK06914        149 GLSPYVSSKYALEGFSESLRLELKPFGIDVALIEPGSYNTNIWEVGKQLAENQSETTSPYKEYMKKIQK-HI--NSGSDT  225 (280)
T ss_pred             CCchhHHhHHHHHHHHHHHHHHhhhhCCEEEEEecCCcccchhhccccccccccccccchHHHHHHHHH-HH--hhhhhc
Confidence            23456 66766665555443   24589999999999987632110           000011100000 00  011235


Q ss_pred             cccHHHHHHHHHHHHhCCCCCCceEecCCCccCHH
Q 018503          255 WIHLDDIVNLIYEALSNPSYRGVINGTAPNPVRLA  289 (355)
Q Consensus       255 ~i~v~Dva~~~~~~~~~~~~~~~~~i~~~~~~s~~  289 (355)
                      +++++|+|++++.+++++.....|+++++..+++.
T Consensus       226 ~~~~~dva~~~~~~~~~~~~~~~~~~~~~~~~~~~  260 (280)
T PRK06914        226 FGNPIDVANLIVEIAESKRPKLRYPIGKGVKLMIL  260 (280)
T ss_pred             cCCHHHHHHHHHHHHcCCCCCcccccCCchHHHHH
Confidence            78999999999999998775567888876655444

>PRK07523 gluconate 5-dehydrogenase; Provisional

Probab=99.80  E-value=1.4e-18  Score=150.47  Aligned_cols=222  Identities=14%  Similarity=0.087  Sum_probs=148.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCC----CCCccCCCeeecCCcchhhhcC-------CC
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG----KKTRFFPGVMIAEEPQWRDCIQ-------GS  117 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~----~~~~~~~~~d~~~~~~~~~~~~-------~~  117 (355)
                      ++++||||||+|+||++++++|+++|++|++++|+.++.......    ........+|+.|.+++.++++       .+
T Consensus         9 ~~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   88 (255)
T PRK07523          9 TGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTDHDAVRAAIDAFEAEIGPI   88 (255)
T ss_pred             CCCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCCHHHHHHHHHHHHHhcCCC
Confidence            457999999999999999999999999999999987654322111    0001123468888888777664       47


Q ss_pred             cEEEECCCCCCCC---CCChhhHHHHHHHhhhhHHHHHHHHHcC--CCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCC
Q 018503          118 TAVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGN  192 (355)
Q Consensus       118 d~vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~  192 (355)
                      |+|||++|.....   ....+..+..+++|+.++.++++++...  ..+.+++|++||...  ..         ..+...
T Consensus        89 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~--~~---------~~~~~~  157 (255)
T PRK07523         89 DILVNNAGMQFRTPLEDFPADAFERLLRTNISSVFYVGQAVARHMIARGAGKIINIASVQS--AL---------ARPGIA  157 (255)
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEEccchh--cc---------CCCCCc
Confidence            9999999975322   2244556778899999999999887642  135678999998754  21         112344


Q ss_pred             hh-HHHHHHHHHHHHhcc---CCCCeEEEEEecEEEeCCCCcccchHHHHHH-HhCCCCCCCCcceecccHHHHHHHHHH
Q 018503          193 DY-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALAKMIPLFMM-FAGGPLGSGQQWFSWIHLDDIVNLIYE  267 (355)
Q Consensus       193 ~y-~~k~~~~~~~~~~~~---~~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~v~Dva~~~~~  267 (355)
                      .| .+|...+.+...+..   ..|+++.+++|+.+.++.............. ....+      ...+...+|+|++++.
T Consensus       158 ~y~~sK~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~dva~~~~~  231 (255)
T PRK07523        158 PYTATKGAVGNLTKGMATDWAKHGLQCNAIAPGYFDTPLNAALVADPEFSAWLEKRTP------AGRWGKVEELVGACVF  231 (255)
T ss_pred             cHHHHHHHHHHHHHHHHHHhhHhCeEEEEEEECcccCchhhhhccCHHHHHHHHhcCC------CCCCcCHHHHHHHHHH
Confidence            56 677666655554443   3589999999999988753211000011111 11112      2347789999999999


Q ss_pred             HHhCCC---CCCceEecCCCccC
Q 018503          268 ALSNPS---YRGVINGTAPNPVR  287 (355)
Q Consensus       268 ~~~~~~---~~~~~~i~~~~~~s  287 (355)
                      ++..+.   .+..+++.+|...|
T Consensus       232 l~~~~~~~~~G~~i~~~gg~~~~  254 (255)
T PRK07523        232 LASDASSFVNGHVLYVDGGITAS  254 (255)
T ss_pred             HcCchhcCccCcEEEECCCeecc
Confidence            998643   34478888876544

>PRK06182 short chain dehydrogenase; Validated

Probab=99.80  E-value=2.5e-18  Score=150.31  Aligned_cols=218  Identities=17%  Similarity=0.061  Sum_probs=142.2

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcC-------CCcEEEE
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ-------GSTAVVN  122 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-------~~d~vi~  122 (355)
                      +++|+||||+|+||++++++|+++|++|++++|+.++........  .....+|+.|.+++.++++       ++|++||
T Consensus         3 ~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~l~~~~~~~--~~~~~~Dv~~~~~~~~~~~~~~~~~~~id~li~   80 (273)
T PRK06182          3 KKVALVTGASSGIGKATARRLAAQGYTVYGAARRVDKMEDLASLG--VHPLSLDVTDEASIKAAVDTIIAEEGRIDVLVN   80 (273)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhCC--CeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEE
Confidence            478999999999999999999999999999999877654332211  1144579999988877664       6899999


Q ss_pred             CCCCCCC---CCCChhhHHHHHHHhhhhHH----HHHHHHHcCCCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCChh-
Q 018503          123 LAGTPIG---TRWSSEIKKEIKESRIRVTS----KVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-  194 (355)
Q Consensus       123 ~a~~~~~---~~~~~~~~~~~~~~n~~~~~----~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~~y-  194 (355)
                      +||....   .....+.+...+++|+.++.    .+++.+++  .+.+++|++||...  +..         .+....| 
T Consensus        81 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~--~~~g~iv~isS~~~--~~~---------~~~~~~Y~  147 (273)
T PRK06182         81 NAGYGSYGAIEDVPIDEARRQFEVNLFGAARLTQLVLPHMRA--QRSGRIINISSMGG--KIY---------TPLGAWYH  147 (273)
T ss_pred             CCCcCCCCchhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHh--cCCCEEEEEcchhh--cCC---------CCCccHhH
Confidence            9997432   22245667888899998854    44455555  56678999999654  111         1123457 


Q ss_pred             HHHHHHHHHHHHhc---cCCCCeEEEEEecEEEeCCCCccc-c---------hHHHHHHHhCCCCCCCCcceecccHHHH
Q 018503          195 LAEVCREWEGTALK---VNKDVRLALIRIGIVLGKDGGALA-K---------MIPLFMMFAGGPLGSGQQWFSWIHLDDI  261 (355)
Q Consensus       195 ~~k~~~~~~~~~~~---~~~~~~~~i~Rp~~i~G~~~~~~~-~---------~~~~~~~~~~~~~~~~~~~~~~i~v~Dv  261 (355)
                      .+|...+.+.+.+.   ...|+++++++||.+.++...... .         +........ ..+........+.+.+|+
T Consensus       148 ~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~v  226 (273)
T PRK06182        148 ATKFALEGFSDALRLEVAPFGIDVVVIEPGGIKTEWGDIAADHLLKTSGNGAYAEQAQAVA-ASMRSTYGSGRLSDPSVI  226 (273)
T ss_pred             HHHHHHHHHHHHHHHHhcccCCEEEEEecCCcccccchhhhhhhcccccccchHHHHHHHH-HHHHHhhccccCCCHHHH
Confidence            67766665544332   345899999999999876421100 0         000000000 000001112346899999


Q ss_pred             HHHHHHHHhCCCCCCceEecCC
Q 018503          262 VNLIYEALSNPSYRGVINGTAP  283 (355)
Q Consensus       262 a~~~~~~~~~~~~~~~~~i~~~  283 (355)
                      |++++.++........|+++.+
T Consensus       227 A~~i~~~~~~~~~~~~~~~g~~  248 (273)
T PRK06182        227 ADAISKAVTARRPKTRYAVGFG  248 (273)
T ss_pred             HHHHHHHHhCCCCCceeecCcc
Confidence            9999999987644557766554

>PRK12829 short chain dehydrogenase; Provisional

Probab=99.80  E-value=1.2e-18  Score=151.69  Aligned_cols=223  Identities=17%  Similarity=0.073  Sum_probs=142.4

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCC--CccCCCeeecCCcchhhhc-------CCCc
Q 018503           48 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKK--TRFFPGVMIAEEPQWRDCI-------QGST  118 (355)
Q Consensus        48 ~~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~--~~~~~~~d~~~~~~~~~~~-------~~~d  118 (355)
                      .+.+++|||||+|++|++++++|+++|++|++++|+.+..........  ......+|+.|++++.+++       .++|
T Consensus         9 ~~~~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   88 (264)
T PRK12829          9 LDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAARLPGAKVTATVADVADPAQVERVFDTAVERFGGLD   88 (264)
T ss_pred             cCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCceEEEEccCCCHHHHHHHHHHHHHHhCCCC
Confidence            345799999999999999999999999999999998765433211100  0013457888888776655       3689


Q ss_pred             EEEECCCCCCC----CCCChhhHHHHHHHhhhhHHHHHHHHHcC--CCCC-CcEEEEeeeeeeeeCCCCCccccCCCCCC
Q 018503          119 AVVNLAGTPIG----TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGV-RPSVLVSATALGYYGTSETEVFDESSPSG  191 (355)
Q Consensus       119 ~vi~~a~~~~~----~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~-~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~  191 (355)
                      +|||++|....    .....+.....++.|+.++..+++++...  ..+. ++++++||.... ++.          +..
T Consensus        89 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~vv~~ss~~~~-~~~----------~~~  157 (264)
T PRK12829         89 VLVNNAGIAGPTGGIDEITPEQWEQTLAVNLNGQFYFARAAVPLLKASGHGGVIIALSSVAGR-LGY----------PGR  157 (264)
T ss_pred             EEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEecccccc-cCC----------CCC
Confidence            99999997511    23445667888999999999988876321  1334 567777765431 221          123


Q ss_pred             Chh-HHHHHHHHHHHHhcc---CCCCeEEEEEecEEEeCCCCcccchHHHHHHHhCCCC-------CCCCcceecccHHH
Q 018503          192 NDY-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPL-------GSGQQWFSWIHLDD  260 (355)
Q Consensus       192 ~~y-~~k~~~~~~~~~~~~---~~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~i~v~D  260 (355)
                      ..| .+|...+.....+..   ..+++++++||++++++.....   .+......+...       ........+++++|
T Consensus       158 ~~y~~~K~a~~~~~~~l~~~~~~~~i~~~~l~pg~v~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  234 (264)
T PRK12829        158 TPYAASKWAVVGLVKSLAIELGPLGIRVNAILPGIVRGPRMRRV---IEARAQQLGIGLDEMEQEYLEKISLGRMVEPED  234 (264)
T ss_pred             chhHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCCcCChHHHHH---hhhhhhccCCChhHHHHHHHhcCCCCCCCCHHH
Confidence            356 666655555444332   2489999999999998853211   110000000000       00011235899999


Q ss_pred             HHHHHHHHHhCCC---CCCceEecCCC
Q 018503          261 IVNLIYEALSNPS---YRGVINGTAPN  284 (355)
Q Consensus       261 va~~~~~~~~~~~---~~~~~~i~~~~  284 (355)
                      +|+++..++....   .+..|++.+|.
T Consensus       235 ~a~~~~~l~~~~~~~~~g~~~~i~~g~  261 (264)
T PRK12829        235 IAATALFLASPAARYITGQAISVDGNV  261 (264)
T ss_pred             HHHHHHHHcCccccCccCcEEEeCCCc
Confidence            9999999886432   34588888775

>PRK08219 short chain dehydrogenase; Provisional

Probab=99.80  E-value=2.2e-18  Score=146.50  Aligned_cols=207  Identities=13%  Similarity=0.122  Sum_probs=135.3

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcC---CCcEEEECCCC
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ---GSTAVVNLAGT  126 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~---~~d~vi~~a~~  126 (355)
                      +|+|+||||+|++|+++++.|+++ ++|++++|+......+...........+|+.|.+++.++++   ++|+|||++|.
T Consensus         3 ~~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~ag~   81 (227)
T PRK08219          3 RPTALITGASRGIGAAIARELAPT-HTLLLGGRPAERLDELAAELPGATPFPVDLTDPEAIAAAVEQLGRLDVLVHNAGV   81 (227)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHhh-CCEEEEeCCHHHHHHHHHHhccceEEecCCCCHHHHHHHHHhcCCCCEEEECCCc
Confidence            478999999999999999999999 99999999876533221110001144678999888888776   58999999997


Q ss_pred             CCCC---CCChhhHHHHHHHhhhhH----HHHHHHHHcCCCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCChh-HHHH
Q 018503          127 PIGT---RWSSEIKKEIKESRIRVT----SKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-LAEV  198 (355)
Q Consensus       127 ~~~~---~~~~~~~~~~~~~n~~~~----~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~~y-~~k~  198 (355)
                      ....   ....+.....++.|+.+.    .++++++++   ..+++|++||...  ++..         +....| ..|.
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~---~~~~~v~~ss~~~--~~~~---------~~~~~y~~~K~  147 (227)
T PRK08219         82 ADLGPVAESTVDEWRATLEVNVVAPAELTRLLLPALRA---AHGHVVFINSGAG--LRAN---------PGWGSYAASKF  147 (227)
T ss_pred             CCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh---CCCeEEEEcchHh--cCcC---------CCCchHHHHHH
Confidence            4321   233455566788888884    444444555   3568999998766  4321         123456 6666


Q ss_pred             HHHHHHHHhccC-CC-CeEEEEEecEEEeCCCCcccchHHHHHHHhCCCCCCCCcceecccHHHHHHHHHHHHhCCCCCC
Q 018503          199 CREWEGTALKVN-KD-VRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRG  276 (355)
Q Consensus       199 ~~~~~~~~~~~~-~~-~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~~~  276 (355)
                      ..+.....+... .+ +++..++|+.+.++....   +.    ...+...    ....+++++|+|++++.+++.+..+.
T Consensus       148 a~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~---~~----~~~~~~~----~~~~~~~~~dva~~~~~~l~~~~~~~  216 (227)
T PRK08219        148 ALRALADALREEEPGNVRVTSVHPGRTDTDMQRG---LV----AQEGGEY----DPERYLRPETVAKAVRFAVDAPPDAH  216 (227)
T ss_pred             HHHHHHHHHHHHhcCCceEEEEecCCccchHhhh---hh----hhhcccc----CCCCCCCHHHHHHHHHHHHcCCCCCc
Confidence            555554443322 23 888888888765542111   00    0111111    12458999999999999998876455


Q ss_pred             ceEecC
Q 018503          277 VINGTA  282 (355)
Q Consensus       277 ~~~i~~  282 (355)
                      ++++.-
T Consensus       217 ~~~~~~  222 (227)
T PRK08219        217 ITEVVV  222 (227)
T ss_pred             cceEEE
Confidence            776653

>PRK07774 short chain dehydrogenase; Provisional

Probab=99.79  E-value=5.6e-18  Score=146.22  Aligned_cols=217  Identities=20%  Similarity=0.144  Sum_probs=147.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCC----CCCCccCCCeeecCCcchhhhcC-------CC
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP----GKKTRFFPGVMIAEEPQWRDCIQ-------GS  117 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~~d~~~~~~~~~~~~-------~~  117 (355)
                      +.++++||||+|+||++++++|+++|++|++++|+.+.......    .........+|+.+.+++.++++       ++
T Consensus         5 ~~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   84 (250)
T PRK07774          5 DDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVADGGTAIAVQVDVSDPDSAKAMADATVSAFGGI   84 (250)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCC
Confidence            34789999999999999999999999999999998754322211    00000133578888887765553       58


Q ss_pred             cEEEECCCCCCC------CCCChhhHHHHHHHhhhhHHHHHHHHHcC--CCCCCcEEEEeeeeeeeeCCCCCccccCCCC
Q 018503          118 TAVVNLAGTPIG------TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSP  189 (355)
Q Consensus       118 d~vi~~a~~~~~------~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~  189 (355)
                      |+|||+||....      ...+.+.....+++|+.++.++++++...  ..+.+++|++||...  |+            
T Consensus        85 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~--~~------------  150 (250)
T PRK07774         85 DYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRAVYKHMAKRGGGAIVNQSSTAA--WL------------  150 (250)
T ss_pred             CEEEECCCCcCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCcEEEEEecccc--cC------------
Confidence            999999997421      12244566778899999999998887652  134568999999876  43            


Q ss_pred             CCChh-HHHHHHHHHHHHhccC---CCCeEEEEEecEEEeCCCCcccchHHHH-HHHhCCCCCCCCcceecccHHHHHHH
Q 018503          190 SGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLF-MMFAGGPLGSGQQWFSWIHLDDIVNL  264 (355)
Q Consensus       190 ~~~~y-~~k~~~~~~~~~~~~~---~~~~~~i~Rp~~i~G~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~v~Dva~~  264 (355)
                      +.+.| .+|...+...+.+..+   .++.+++++||.+..+....... .... ....+.+.      .-+.+++|+|++
T Consensus       151 ~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~-~~~~~~~~~~~~~------~~~~~~~d~a~~  223 (250)
T PRK07774        151 YSNFYGLAKVGLNGLTQQLARELGGMNIRVNAIAPGPIDTEATRTVTP-KEFVADMVKGIPL------SRMGTPEDLVGM  223 (250)
T ss_pred             CccccHHHHHHHHHHHHHHHHHhCccCeEEEEEecCcccCccccccCC-HHHHHHHHhcCCC------CCCcCHHHHHHH
Confidence            23457 7777666665555433   48999999999887765322111 0111 11222222      125678999999


Q ss_pred             HHHHHhCCC---CCCceEecCCCcc
Q 018503          265 IYEALSNPS---YRGVINGTAPNPV  286 (355)
Q Consensus       265 ~~~~~~~~~---~~~~~~i~~~~~~  286 (355)
                      ++.++....   .+.+|++.+++.+
T Consensus       224 ~~~~~~~~~~~~~g~~~~v~~g~~~  248 (250)
T PRK07774        224 CLFLLSDEASWITGQIFNVDGGQII  248 (250)
T ss_pred             HHHHhChhhhCcCCCEEEECCCeec
Confidence            999988642   3558999988654

>PRK12746 short chain dehydrogenase; Provisional

Probab=99.79  E-value=4.6e-18  Score=147.10  Aligned_cols=219  Identities=16%  Similarity=0.107  Sum_probs=142.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEE-ecCCchhhccC----CCCCCccCCCeeecCCcchhhhcC--------
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVL-TRSRSKAELIF----PGKKTRFFPGVMIAEEPQWRDCIQ--------  115 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~-~r~~~~~~~~~----~~~~~~~~~~~d~~~~~~~~~~~~--------  115 (355)
                      +.++|+||||+|+||++++++|+++|++|.++ .|+..+.....    ..........+|+.|.+++.++++        
T Consensus         5 ~~~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~   84 (254)
T PRK12746          5 DGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIESNGGKAFLIEADLNSIDGVKKLVEQLKNELQI   84 (254)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCcCCHHHHHHHHHHHHHHhcc
Confidence            34799999999999999999999999999875 56654332111    100111134578889888776654        


Q ss_pred             -----CCcEEEECCCCCCCC---CCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCCCCccccCC
Q 018503          116 -----GSTAVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDES  187 (355)
Q Consensus       116 -----~~d~vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~  187 (355)
                           ++|+|||+||.....   +...+.....+++|+.++.++++++.......+++|++||..+  +..         
T Consensus        85 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~sS~~~--~~~---------  153 (254)
T PRK12746         85 RVGTSEIDILVNNAGIGTQGTIENTTEEIFDEIMAVNIKAPFFLIQQTLPLLRAEGRVINISSAEV--RLG---------  153 (254)
T ss_pred             ccCCCCccEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECCHHh--cCC---------
Confidence                 489999999974321   2234455778889999999999988652123358999998766  432         


Q ss_pred             CCCCChh-HHHHHHHHHHHHhcc---CCCCeEEEEEecEEEeCCCCcccchHHHHHHHhCCCCCCCCcceecccHHHHHH
Q 018503          188 SPSGNDY-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVN  263 (355)
Q Consensus       188 ~~~~~~y-~~k~~~~~~~~~~~~---~~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~  263 (355)
                      .+....| .+|...+.+...+..   ..++++++++|+.+.++.......-..........     .....+++++|+|+
T Consensus       154 ~~~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~dva~  228 (254)
T PRK12746        154 FTGSIAYGLSKGALNTMTLPLAKHLGERGITVNTIMPGYTKTDINAKLLDDPEIRNFATNS-----SVFGRIGQVEDIAD  228 (254)
T ss_pred             CCCCcchHhhHHHHHHHHHHHHHHHhhcCcEEEEEEECCccCcchhhhccChhHHHHHHhc-----CCcCCCCCHHHHHH
Confidence            1223456 667666555444333   35899999999999887432110000001111111     11234679999999


Q ss_pred             HHHHHHhCCC---CCCceEecCC
Q 018503          264 LIYEALSNPS---YRGVINGTAP  283 (355)
Q Consensus       264 ~~~~~~~~~~---~~~~~~i~~~  283 (355)
                      ++..++..+.   .+.+|++.++
T Consensus       229 ~~~~l~~~~~~~~~g~~~~i~~~  251 (254)
T PRK12746        229 AVAFLASSDSRWVTGQIIDVSGG  251 (254)
T ss_pred             HHHHHcCcccCCcCCCEEEeCCC
Confidence            9998887643   3558999876

>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.79  E-value=1e-17  Score=145.07  Aligned_cols=220  Identities=14%  Similarity=0.137  Sum_probs=144.3

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchh-hcc----CCCCCCccCCCeeecCCcchhhhcC-------CC
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKA-ELI----FPGKKTRFFPGVMIAEEPQWRDCIQ-------GS  117 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~~----~~~~~~~~~~~~d~~~~~~~~~~~~-------~~  117 (355)
                      +++|+||||+|+||++++++|+++|++|++++|..... ...    ...........+|+.+++++.++++       .+
T Consensus         2 ~k~vlItG~sg~iG~~la~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   81 (256)
T PRK12745          2 RPVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRALGVEVIFFPADVADLSAHEAMLDAAQAAWGRI   81 (256)
T ss_pred             CcEEEEeCCCchHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHhcCCC
Confidence            46899999999999999999999999999999875421 111    0000011134578888887765553       68


Q ss_pred             cEEEECCCCCCC-----CCCChhhHHHHHHHhhhhHHHHHHHHHcC---CCC-----CCcEEEEeeeeeeeeCCCCCccc
Q 018503          118 TAVVNLAGTPIG-----TRWSSEIKKEIKESRIRVTSKVVDLINES---PEG-----VRPSVLVSATALGYYGTSETEVF  184 (355)
Q Consensus       118 d~vi~~a~~~~~-----~~~~~~~~~~~~~~n~~~~~~l~~a~~~~---~~~-----~~~~v~~Ss~~~~~yg~~~~~~~  184 (355)
                      |+|||+||....     .....+.++..+++|+.++.++++++...   ..+     .+++|++||.... ++.      
T Consensus        82 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~-~~~------  154 (256)
T PRK12745         82 DCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLTQAVAKRMLAQPEPEELPHRSIVFVSSVNAI-MVS------  154 (256)
T ss_pred             CEEEECCccCCCCCCChhhCCHHHHHHHHHhcchHHHHHHHHHHHHHHhccCcCCCCCcEEEEECChhhc-cCC------
Confidence            999999986422     12244667788999999999998877431   011     4679999997652 221      


Q ss_pred             cCCCCCCChh-HHHHHHHHHHHHhcc---CCCCeEEEEEecEEEeCCCCcccchHHHHHHHhCCCCCCCCcceecccHHH
Q 018503          185 DESSPSGNDY-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDD  260 (355)
Q Consensus       185 ~e~~~~~~~y-~~k~~~~~~~~~~~~---~~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D  260 (355)
                          +....| .+|...+.+...+..   ..++++++++|+.+.++..........  .......    .....+.+.+|
T Consensus       155 ----~~~~~Y~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~--~~~~~~~----~~~~~~~~~~d  224 (256)
T PRK12745        155 ----PNRGEYCISKAGLSMAAQLFAARLAEEGIGVYEVRPGLIKTDMTAPVTAKYD--ALIAKGL----VPMPRWGEPED  224 (256)
T ss_pred             ----CCCcccHHHHHHHHHHHHHHHHHHHHhCCEEEEEecCCCcCccccccchhHH--hhhhhcC----CCcCCCcCHHH
Confidence                123456 777777666555543   258999999999998875322111111  1111100    11234779999


Q ss_pred             HHHHHHHHHhCCC---CCCceEecCCCcc
Q 018503          261 IVNLIYEALSNPS---YRGVINGTAPNPV  286 (355)
Q Consensus       261 va~~~~~~~~~~~---~~~~~~i~~~~~~  286 (355)
                      +|+++..++....   .+..|++.++...
T Consensus       225 ~a~~i~~l~~~~~~~~~G~~~~i~gg~~~  253 (256)
T PRK12745        225 VARAVAALASGDLPYSTGQAIHVDGGLSI  253 (256)
T ss_pred             HHHHHHHHhCCcccccCCCEEEECCCeec
Confidence            9999999887542   3458899887543

>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

Probab=99.78  E-value=1.5e-17  Score=144.33  Aligned_cols=215  Identities=16%  Similarity=0.090  Sum_probs=140.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhh---ccCCCCCCccCCCeeecCCcchhhhcC-------CCc
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAE---LIFPGKKTRFFPGVMIAEEPQWRDCIQ-------GST  118 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~---~~~~~~~~~~~~~~d~~~~~~~~~~~~-------~~d  118 (355)
                      ..++++||||+|+||++++++|+++|++|++++|+.....   .+...........+|+.+.+++.++++       ++|
T Consensus         7 ~~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   86 (260)
T PRK12823          7 AGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSELVHEVAAELRAAGGEALALTADLETYAGAQAAMAAAVEAFGRID   86 (260)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCchHHHHHHHHHHhcCCeEEEEEEeCCCHHHHHHHHHHHHHHcCCCe
Confidence            4578999999999999999999999999999999753211   111111111134578888877665553       689


Q ss_pred             EEEECCCCCC----CCCCChhhHHHHHHHhhhhHHHHHHHH----HcCCCCCCcEEEEeeeeeeeeCCCCCccccCCCCC
Q 018503          119 AVVNLAGTPI----GTRWSSEIKKEIKESRIRVTSKVVDLI----NESPEGVRPSVLVSATALGYYGTSETEVFDESSPS  190 (355)
Q Consensus       119 ~vi~~a~~~~----~~~~~~~~~~~~~~~n~~~~~~l~~a~----~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~  190 (355)
                      ++||+||...    ......+.....+++|+.++..+++.+    .+  .+.+++|++||...  ++.           .
T Consensus        87 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~~~g~iv~~sS~~~--~~~-----------~  151 (260)
T PRK12823         87 VLINNVGGTIWAKPFEEYEEEQIEAEIRRSLFPTLWCCRAVLPHMLA--QGGGAIVNVSSIAT--RGI-----------N  151 (260)
T ss_pred             EEEECCccccCCCChhhCChHHHHHHHHHHhHHHHHHHHHHHHHHHh--cCCCeEEEEcCccc--cCC-----------C
Confidence            9999998531    123455666777889998876555444    34  45678999999866  531           1


Q ss_pred             CChh-HHHHHHHHHHHHhccC---CCCeEEEEEecEEEeCCCCc----------ccchHHHH--HHHhCCCCCCCCccee
Q 018503          191 GNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGA----------LAKMIPLF--MMFAGGPLGSGQQWFS  254 (355)
Q Consensus       191 ~~~y-~~k~~~~~~~~~~~~~---~~~~~~i~Rp~~i~G~~~~~----------~~~~~~~~--~~~~~~~~~~~~~~~~  254 (355)
                      ...| .+|...+.+.+.+..+   .+++++.++|+.++++....          .....+.+  ....+.++      .-
T Consensus       152 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~  225 (260)
T PRK12823        152 RVPYSAAKGGVNALTASLAFEYAEHGIRVNAVAPGGTEAPPRRVPRNAAPQSEQEKAWYQQIVDQTLDSSLM------KR  225 (260)
T ss_pred             CCccHHHHHHHHHHHHHHHHHhcccCcEEEEEecCccCCcchhhHHhhccccccccccHHHHHHHHhccCCc------cc
Confidence            2357 7787777666655443   48999999999999873110          00111111  11111111      23


Q ss_pred             cccHHHHHHHHHHHHhCCC---CCCceEecCCC
Q 018503          255 WIHLDDIVNLIYEALSNPS---YRGVINGTAPN  284 (355)
Q Consensus       255 ~i~v~Dva~~~~~~~~~~~---~~~~~~i~~~~  284 (355)
                      +.+.+|+|++++.++....   .+..+++.+|+
T Consensus       226 ~~~~~dva~~~~~l~s~~~~~~~g~~~~v~gg~  258 (260)
T PRK12823        226 YGTIDEQVAAILFLASDEASYITGTVLPVGGGD  258 (260)
T ss_pred             CCCHHHHHHHHHHHcCcccccccCcEEeecCCC
Confidence            5679999999999987643   34488887765

>PRK07806 short chain dehydrogenase; Provisional

Probab=99.78  E-value=2.5e-18  Score=148.18  Aligned_cols=222  Identities=13%  Similarity=0.069  Sum_probs=142.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCch-hhcc----CCCCCCccCCCeeecCCcchhhhcC-------C
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSK-AELI----FPGKKTRFFPGVMIAEEPQWRDCIQ-------G  116 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~-~~~~----~~~~~~~~~~~~d~~~~~~~~~~~~-------~  116 (355)
                      +.++++||||+|+||++++++|+++|++|++++|+... ...+    ...........+|+.|++++.++++       +
T Consensus         5 ~~k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   84 (248)
T PRK07806          5 PGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTDEESVAALMDTAREEFGG   84 (248)
T ss_pred             CCcEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence            34789999999999999999999999999999997543 1111    1100001134568888888766553       5


Q ss_pred             CcEEEECCCCCCCCCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCChh-H
Q 018503          117 STAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-L  195 (355)
Q Consensus       117 ~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~~y-~  195 (355)
                      +|+|||+|+.....   ...+...+++|+.++.++++++...-....++|++||.... +...     .+..+....| .
T Consensus        85 ~d~vi~~ag~~~~~---~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~iv~isS~~~~-~~~~-----~~~~~~~~~Y~~  155 (248)
T PRK07806         85 LDALVLNASGGMES---GMDEDYAMRLNRDAQRNLARAALPLMPAGSRVVFVTSHQAH-FIPT-----VKTMPEYEPVAR  155 (248)
T ss_pred             CcEEEECCCCCCCC---CCCcceeeEeeeHHHHHHHHHHHhhccCCceEEEEeCchhh-cCcc-----ccCCccccHHHH
Confidence            89999999863211   22345677899999999999987631123589999986542 1110     1122223467 7


Q ss_pred             HHHHHHHHHHHhcc---CCCCeEEEEEecEEEeCCCCcc-cchHHHHHHHhCCCCCCCCcceecccHHHHHHHHHHHHhC
Q 018503          196 AEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGAL-AKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSN  271 (355)
Q Consensus       196 ~k~~~~~~~~~~~~---~~~~~~~i~Rp~~i~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~  271 (355)
                      +|...+.....+..   ..++++++++|+.+-++..... ....+..  .....    .....+++++|+|++++.+++.
T Consensus       156 sK~a~e~~~~~l~~~~~~~~i~v~~v~pg~~~~~~~~~~~~~~~~~~--~~~~~----~~~~~~~~~~dva~~~~~l~~~  229 (248)
T PRK07806        156 SKRAGEDALRALRPELAEKGIGFVVVSGDMIEGTVTATLLNRLNPGA--IEARR----EAAGKLYTVSEFAAEVARAVTA  229 (248)
T ss_pred             HHHHHHHHHHHHHHHhhccCeEEEEeCCccccCchhhhhhccCCHHH--HHHHH----hhhcccCCHHHHHHHHHHHhhc
Confidence            78777766655543   2489999999887766521110 0000000  00000    0113689999999999999996


Q ss_pred             CC-CCCceEecCCCc
Q 018503          272 PS-YRGVINGTAPNP  285 (355)
Q Consensus       272 ~~-~~~~~~i~~~~~  285 (355)
                      +. .+.+|++++++.
T Consensus       230 ~~~~g~~~~i~~~~~  244 (248)
T PRK07806        230 PVPSGHIEYVGGADY  244 (248)
T ss_pred             cccCccEEEecCccc
Confidence            64 445899998863

>COG2910 Putative NADH-flavin reductase [General function prediction only]

Probab=99.78  E-value=1.8e-17  Score=128.29  Aligned_cols=207  Identities=17%  Similarity=0.173  Sum_probs=138.5

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcCCCcEEEECCCCCCCC
Q 018503           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTPIGT  130 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~~~~~  130 (355)
                      |||.|+||||.+|++|++..+++||+|++++|++++.......    ...+.|+.|.+++.+.+.+.|+||..-+..-  
T Consensus         1 mKIaiIgAsG~~Gs~i~~EA~~RGHeVTAivRn~~K~~~~~~~----~i~q~Difd~~~~a~~l~g~DaVIsA~~~~~--   74 (211)
T COG2910           1 MKIAIIGASGKAGSRILKEALKRGHEVTAIVRNASKLAARQGV----TILQKDIFDLTSLASDLAGHDAVISAFGAGA--   74 (211)
T ss_pred             CeEEEEecCchhHHHHHHHHHhCCCeeEEEEeChHhccccccc----eeecccccChhhhHhhhcCCceEEEeccCCC--
Confidence            7999999999999999999999999999999999887654222    1456799999999999999999998876531  


Q ss_pred             CCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCChh-HHHHHHHHHHHHhcc
Q 018503          131 RWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-LAEVCREWEGTALKV  209 (355)
Q Consensus       131 ~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~~y-~~k~~~~~~~~~~~~  209 (355)
                        +..  .   .........|++.++.  .++.|++.++..+.. |=+.....++-...|.+.+ ..+...+.+.. ++.
T Consensus        75 --~~~--~---~~~~k~~~~li~~l~~--agv~RllVVGGAGSL-~id~g~rLvD~p~fP~ey~~~A~~~ae~L~~-Lr~  143 (211)
T COG2910          75 --SDN--D---ELHSKSIEALIEALKG--AGVPRLLVVGGAGSL-EIDEGTRLVDTPDFPAEYKPEALAQAEFLDS-LRA  143 (211)
T ss_pred             --CCh--h---HHHHHHHHHHHHHHhh--cCCeeEEEEcCccce-EEcCCceeecCCCCchhHHHHHHHHHHHHHH-Hhh
Confidence              111  1   1223346678888888  799999999987764 3333332333222222222 33333333333 444


Q ss_pred             CCCCeEEEEEecEEEeCCCCcccchHHHHHHHhCCCCCCCCcceecccHHHHHHHHHHHHhCCCC-CCceEe
Q 018503          210 NKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSY-RGVING  280 (355)
Q Consensus       210 ~~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~-~~~~~i  280 (355)
                      +..++|+.+-|+.++-|+.......+      .+..+-....--+.|..+|.|-+++..++++.. .+.|.+
T Consensus       144 ~~~l~WTfvSPaa~f~PGerTg~yrl------ggD~ll~n~~G~SrIS~aDYAiA~lDe~E~~~h~rqRftv  209 (211)
T COG2910         144 EKSLDWTFVSPAAFFEPGERTGNYRL------GGDQLLVNAKGESRISYADYAIAVLDELEKPQHIRQRFTV  209 (211)
T ss_pred             ccCcceEEeCcHHhcCCccccCceEe------ccceEEEcCCCceeeeHHHHHHHHHHHHhcccccceeeee
Confidence            45699999999999988542211111      111111111223689999999999999999873 334543

>PRK12828 short chain dehydrogenase; Provisional

Probab=99.78  E-value=1.3e-17  Score=142.92  Aligned_cols=207  Identities=18%  Similarity=0.196  Sum_probs=140.1

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhcc----CCCCCCccCCCeeecCCcchhhhcC-------CCc
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELI----FPGKKTRFFPGVMIAEEPQWRDCIQ-------GST  118 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~----~~~~~~~~~~~~d~~~~~~~~~~~~-------~~d  118 (355)
                      +++||||||+|+||++++++|+++|++|++++|+..+....    ....  .....+|+.|.+++.++++       ++|
T Consensus         7 ~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   84 (239)
T PRK12828          7 GKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPADA--LRIGGIDLVDPQAARRAVDEVNRQFGRLD   84 (239)
T ss_pred             CCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCChHhHHHHHHHHhhcC--ceEEEeecCCHHHHHHHHHHHHHHhCCcC
Confidence            47899999999999999999999999999999987553221    1110  0133478888887766554       689


Q ss_pred             EEEECCCCCCC---CCCChhhHHHHHHHhhhhHHHHHHHHHcC--CCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCCh
Q 018503          119 AVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGND  193 (355)
Q Consensus       119 ~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~~  193 (355)
                      +|||+++....   .....+.....++.|+.++.++++++...  ..+.+++|++||...  ++..         +....
T Consensus        85 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~--~~~~---------~~~~~  153 (239)
T PRK12828         85 ALVNIAGAFVWGTIADGDADTWDRMYGVNVKTTLNASKAALPALTASGGGRIVNIGAGAA--LKAG---------PGMGA  153 (239)
T ss_pred             EEEECCcccCcCChhhCCHHHHHHHHHhhchhHHHHHHHHHHHHHhcCCCEEEEECchHh--ccCC---------CCcch
Confidence            99999986422   12234555677889999999988877421  146789999999876  5421         22345


Q ss_pred             h-HHHHHHHHHHHHhcc---CCCCeEEEEEecEEEeCCCCcccchHHHHHHHhCCCCCCCCcceecccHHHHHHHHHHHH
Q 018503          194 Y-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEAL  269 (355)
Q Consensus       194 y-~~k~~~~~~~~~~~~---~~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~  269 (355)
                      | .+|...+...+.+..   ..++++..+||+.++++.....  .          +   ......+++++|+|+++..++
T Consensus       154 y~~sk~a~~~~~~~~a~~~~~~~i~~~~i~pg~v~~~~~~~~--~----------~---~~~~~~~~~~~dva~~~~~~l  218 (239)
T PRK12828        154 YAAAKAGVARLTEALAAELLDRGITVNAVLPSIIDTPPNRAD--M----------P---DADFSRWVTPEQIAAVIAFLL  218 (239)
T ss_pred             hHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCcchhhc--C----------C---chhhhcCCCHHHHHHHHHHHh
Confidence            6 556544444433222   3589999999999998742110  0          0   011123799999999999999


Q ss_pred             hCCC---CCCceEecCCC
Q 018503          270 SNPS---YRGVINGTAPN  284 (355)
Q Consensus       270 ~~~~---~~~~~~i~~~~  284 (355)
                      .+..   .+..+.+.++.
T Consensus       219 ~~~~~~~~g~~~~~~g~~  236 (239)
T PRK12828        219 SDEAQAITGASIPVDGGV  236 (239)
T ss_pred             CcccccccceEEEecCCE
Confidence            8653   23467776665

>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional

Probab=99.78  E-value=8.9e-18  Score=145.74  Aligned_cols=222  Identities=14%  Similarity=0.057  Sum_probs=144.9

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCC-----C-CCccCCCeeecCCcchhhhc-------CC
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-----K-KTRFFPGVMIAEEPQWRDCI-------QG  116 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-----~-~~~~~~~~d~~~~~~~~~~~-------~~  116 (355)
                      .++|+||||+|+||+++++.|+++|++|++++|+..........     . .......+|+.+.+++.+++       ..
T Consensus         2 ~k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   81 (259)
T PRK12384          2 NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEIFGR   81 (259)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            46899999999999999999999999999999986543322110     0 00113456888887776555       35


Q ss_pred             CcEEEECCCCCCC---CCCChhhHHHHHHHhhhhHHHHHHHHHcC--CCC-CCcEEEEeeeeeeeeCCCCCccccCCCCC
Q 018503          117 STAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEG-VRPSVLVSATALGYYGTSETEVFDESSPS  190 (355)
Q Consensus       117 ~d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~-~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~  190 (355)
                      +|+|||+||....   .....+.....+++|+.++..+++++...  ..+ ..++|++||.... ++.          +.
T Consensus        82 id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~~ss~~~~-~~~----------~~  150 (259)
T PRK12384         82 VDLLVYNAGIAKAAFITDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDGIQGRIIQINSKSGK-VGS----------KH  150 (259)
T ss_pred             CCEEEECCCcCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCcEEEEecCcccc-cCC----------CC
Confidence            7999999987533   23344566788899999988777766441  123 3589999886531 331          22


Q ss_pred             CChh-HHHHHHHHHHHHhcc---CCCCeEEEEEecEEEeCCCCcccchHHHHHHHhCCC-------CCCCCcceecccHH
Q 018503          191 GNDY-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGP-------LGSGQQWFSWIHLD  259 (355)
Q Consensus       191 ~~~y-~~k~~~~~~~~~~~~---~~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~i~v~  259 (355)
                      ...| .+|...+.+.+.+..   ..|+++.++|||.++++....  .+++.+....+..       ...+.....+++.+
T Consensus       151 ~~~Y~~sKaa~~~l~~~la~e~~~~gi~v~~v~pg~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (259)
T PRK12384        151 NSGYSAAKFGGVGLTQSLALDLAEYGITVHSLMLGNLLKSPMFQ--SLLPQYAKKLGIKPDEVEQYYIDKVPLKRGCDYQ  228 (259)
T ss_pred             CchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCCcccchhhh--hhhHHHHHhcCCChHHHHHHHHHhCcccCCCCHH
Confidence            3457 677765555444432   368999999999988764211  2222221111100       11222345689999


Q ss_pred             HHHHHHHHHHhCCC---CCCceEecCCC
Q 018503          260 DIVNLIYEALSNPS---YRGVINGTAPN  284 (355)
Q Consensus       260 Dva~~~~~~~~~~~---~~~~~~i~~~~  284 (355)
                      |++++++.++.+..   .+..|++.+|+
T Consensus       229 dv~~~~~~l~~~~~~~~~G~~~~v~~g~  256 (259)
T PRK12384        229 DVLNMLLFYASPKASYCTGQSINVTGGQ  256 (259)
T ss_pred             HHHHHHHHHcCcccccccCceEEEcCCE
Confidence            99999999987543   34578998876

>PRK05876 short chain dehydrogenase; Provisional

Probab=99.78  E-value=1.3e-17  Score=145.81  Aligned_cols=234  Identities=10%  Similarity=0.001  Sum_probs=149.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCC----CCCCccCCCeeecCCcchhhhcC-------CC
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP----GKKTRFFPGVMIAEEPQWRDCIQ-------GS  117 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~~d~~~~~~~~~~~~-------~~  117 (355)
                      ++++++||||+|+||+++++.|+++|++|++++|+.+.......    .........+|+.|.+++.++++       .+
T Consensus         5 ~~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i   84 (275)
T PRK05876          5 PGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRHREEVTHLADEAFRLLGHV   84 (275)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHHcCCC
Confidence            45789999999999999999999999999999998755432211    11001133578888888776653       57


Q ss_pred             cEEEECCCCCCC---CCCChhhHHHHHHHhhhhHHHHHHHHHcC--CCC-CCcEEEEeeeeeeeeCCCCCccccCCCCCC
Q 018503          118 TAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEG-VRPSVLVSATALGYYGTSETEVFDESSPSG  191 (355)
Q Consensus       118 d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~-~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~  191 (355)
                      |++||+||....   .....+.....+++|+.++..+++++...  ..+ .+++|++||...  +..         .+..
T Consensus        85 d~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~p~m~~~~~~g~iv~isS~~~--~~~---------~~~~  153 (275)
T PRK05876         85 DVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQGTGGHVVFTASFAG--LVP---------NAGL  153 (275)
T ss_pred             CEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCChhh--ccC---------CCCC
Confidence            999999997432   23345666788899999999988876421  022 468999999765  421         1234


Q ss_pred             Chh-HHHHHHHHHHHHhcc---CCCCeEEEEEecEEEeCCCCcccchHHHHHHHhCC---CCCCCCcceecccHHHHHHH
Q 018503          192 NDY-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGG---PLGSGQQWFSWIHLDDIVNL  264 (355)
Q Consensus       192 ~~y-~~k~~~~~~~~~~~~---~~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~i~v~Dva~~  264 (355)
                      ..| .+|.....+.+.+..   ..|+++++++|+.+.++.......... .......   ..+.....+++++++|+|+.
T Consensus       154 ~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~dva~~  232 (275)
T PRK05876        154 GAYGVAKYGVVGLAETLAREVTADGIGVSVLCPMVVETNLVANSERIRG-AACAQSSTTGSPGPLPLQDDNLGVDDIAQL  232 (275)
T ss_pred             chHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCccccccccchhhhcC-ccccccccccccccccccccCCCHHHHHHH
Confidence            567 677653333333222   248999999999988764321111000 0000000   11222344678999999999


Q ss_pred             HHHHHhCCCCCCceEecCCCccCHHHHHHHHHHHh
Q 018503          265 IYEALSNPSYRGVINGTAPNPVRLAEMCDHLGNVL  299 (355)
Q Consensus       265 ~~~~~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~  299 (355)
                      ++..+.++.   .|.+.  .+..+..+.+.+.+..
T Consensus       233 ~~~ai~~~~---~~~~~--~~~~~~~~~~~~~~~~  262 (275)
T PRK05876        233 TADAILANR---LYVLP--HAASRASIRRRFERID  262 (275)
T ss_pred             HHHHHHcCC---eEEec--ChhhHHHHHHHHHHHH
Confidence            999998653   44443  2355555555555544

>PRK06128 oxidoreductase; Provisional

Probab=99.77  E-value=2.9e-17  Score=145.44  Aligned_cols=221  Identities=14%  Similarity=0.054  Sum_probs=147.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchh--hcc----CCCCCCccCCCeeecCCcchhhhcC-------
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKA--ELI----FPGKKTRFFPGVMIAEEPQWRDCIQ-------  115 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~--~~~----~~~~~~~~~~~~d~~~~~~~~~~~~-------  115 (355)
                      .+++||||||+|+||+++++.|++.|++|++..++.+..  ...    ...........+|+.+.+++.++++       
T Consensus        54 ~~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g  133 (300)
T PRK06128         54 QGRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKDEAFCRQLVERAVKELG  133 (300)
T ss_pred             CCCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHHHHHHhC
Confidence            347999999999999999999999999999887754321  111    1111111133478888887766553       


Q ss_pred             CCcEEEECCCCCCC----CCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCCCCccccCCCCCC
Q 018503          116 GSTAVVNLAGTPIG----TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSG  191 (355)
Q Consensus       116 ~~d~vi~~a~~~~~----~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~  191 (355)
                      ++|++||+||....    ...+.+.+...+++|+.++..+++++...-....++|++||...  |...         +..
T Consensus       134 ~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~~sS~~~--~~~~---------~~~  202 (300)
T PRK06128        134 GLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPPGASIINTGSIQS--YQPS---------PTL  202 (300)
T ss_pred             CCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCcCCEEEEECCccc--cCCC---------CCc
Confidence            68999999996421    23456778899999999999999988752112358999999876  5421         123


Q ss_pred             Chh-HHHHHHHHHHHHhccC---CCCeEEEEEecEEEeCCCCcccchHHHHHHH-hCCCCCCCCcceecccHHHHHHHHH
Q 018503          192 NDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMF-AGGPLGSGQQWFSWIHLDDIVNLIY  266 (355)
Q Consensus       192 ~~y-~~k~~~~~~~~~~~~~---~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~v~Dva~~~~  266 (355)
                      ..| .+|...+.+...+..+   .|+++.+++||.+.++............... ...+      ...+...+|+|.+++
T Consensus       203 ~~Y~asK~a~~~~~~~la~el~~~gI~v~~v~PG~i~t~~~~~~~~~~~~~~~~~~~~p------~~r~~~p~dva~~~~  276 (300)
T PRK06128        203 LDYASTKAAIVAFTKALAKQVAEKGIRVNAVAPGPVWTPLQPSGGQPPEKIPDFGSETP------MKRPGQPVEMAPLYV  276 (300)
T ss_pred             hhHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEECcCcCCCcccCCCCHHHHHHHhcCCC------CCCCcCHHHHHHHHH
Confidence            457 7777666666555443   4899999999999988532111011111111 1112      224678999999999


Q ss_pred             HHHhCCC---CCCceEecCCCcc
Q 018503          267 EALSNPS---YRGVINGTAPNPV  286 (355)
Q Consensus       267 ~~~~~~~---~~~~~~i~~~~~~  286 (355)
                      .++....   .+..|++.+|..+
T Consensus       277 ~l~s~~~~~~~G~~~~v~gg~~~  299 (300)
T PRK06128        277 LLASQESSYVTGEVFGVTGGLLL  299 (300)
T ss_pred             HHhCccccCccCcEEeeCCCEeC
Confidence            9987644   3458888887654

>PRK12935 acetoacetyl-CoA reductase; Provisional

Probab=99.77  E-value=2.4e-17  Score=141.99  Aligned_cols=217  Identities=12%  Similarity=0.054  Sum_probs=142.5

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCC-chhhccC----CCCCCccCCCeeecCCcchhhhcC-------CC
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSR-SKAELIF----PGKKTRFFPGVMIAEEPQWRDCIQ-------GS  117 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~-~~~~~~~----~~~~~~~~~~~d~~~~~~~~~~~~-------~~  117 (355)
                      .++++||||+|+||++++++|+++|++|+++.+.. .......    ..........+|+.+++++.++++       .+
T Consensus         6 ~~~~lItG~s~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   85 (247)
T PRK12935          6 GKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKEGHDVYAVQADVSKVEDANRLVEEAVNHFGKV   85 (247)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEcCCcHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            47899999999999999999999999998765543 3222111    111111234578888888777664       37


Q ss_pred             cEEEECCCCCCCC---CCChhhHHHHHHHhhhhHHHHHHHHHcC--CCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCC
Q 018503          118 TAVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGN  192 (355)
Q Consensus       118 d~vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~  192 (355)
                      |+|||+|+.....   ....+.....+++|+.++..+++++...  +.+.+++|++||.... ++.          +...
T Consensus        86 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~-~~~----------~~~~  154 (247)
T PRK12935         86 DILVNNAGITRDRTFKKLNREDWERVIDVNLSSVFNTTSAVLPYITEAEEGRIISISSIIGQ-AGG----------FGQT  154 (247)
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchhhc-CCC----------CCCc
Confidence            9999999974322   2234667888999999999988887531  1245689999986541 221          2234


Q ss_pred             hh-HHHHHHHHHHHHhcc---CCCCeEEEEEecEEEeCCCCcccchHHHHHHHhCCCCCCCCcceecccHHHHHHHHHHH
Q 018503          193 DY-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEA  268 (355)
Q Consensus       193 ~y-~~k~~~~~~~~~~~~---~~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~  268 (355)
                      .| .+|...+.+...+..   ..++++++++|+.+.++.......... .....      ....+.+.+++|++++++.+
T Consensus       155 ~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~~-~~~~~------~~~~~~~~~~edva~~~~~~  227 (247)
T PRK12935        155 NYSAAKAGMLGFTKSLALELAKTNVTVNAICPGFIDTEMVAEVPEEVR-QKIVA------KIPKKRFGQADEIAKGVVYL  227 (247)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHcCcEEEEEEeCCCcChhhhhccHHHH-HHHHH------hCCCCCCcCHHHHHHHHHHH
Confidence            57 777655555443333   248999999999987653221111000 01111      12235689999999999999


Q ss_pred             HhCCC--CCCceEecCCC
Q 018503          269 LSNPS--YRGVINGTAPN  284 (355)
Q Consensus       269 ~~~~~--~~~~~~i~~~~  284 (355)
                      ++...  .+..|++.++.
T Consensus       228 ~~~~~~~~g~~~~i~~g~  245 (247)
T PRK12935        228 CRDGAYITGQQLNINGGL  245 (247)
T ss_pred             cCcccCccCCEEEeCCCc
Confidence            97653  45689998774

>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.77  E-value=2.3e-17  Score=142.39  Aligned_cols=220  Identities=13%  Similarity=0.029  Sum_probs=142.1

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCCeEEE-EecCCchhhccC----CCCCCccCCCeeecCCcchhhhcC-------CC
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRV-LTRSRSKAELIF----PGKKTRFFPGVMIAEEPQWRDCIQ-------GS  117 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~-~~r~~~~~~~~~----~~~~~~~~~~~d~~~~~~~~~~~~-------~~  117 (355)
                      +++++||||+|+||++++++|+++|++|++ ..|+........    ..........+|+.|++++.++++       .+
T Consensus         4 ~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   83 (250)
T PRK08063          4 GKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEALGRKALAVKANVGDVEKIKEMFAQIDEEFGRL   83 (250)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            468999999999999999999999999876 467654432211    111111133478888888776664       58


Q ss_pred             cEEEECCCCCCCC---CCChhhHHHHHHHhhhhHHHHHHHHHcC--CCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCC
Q 018503          118 TAVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGN  192 (355)
Q Consensus       118 d~vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~  192 (355)
                      |+|||+||.....   ....+.....+++|+.++..+++++...  ..+.++||++||...  +..         .+...
T Consensus        84 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~--~~~---------~~~~~  152 (250)
T PRK08063         84 DVFVNNAASGVLRPAMELEESHWDWTMNINAKALLFCAQEAAKLMEKVGGGKIISLSSLGS--IRY---------LENYT  152 (250)
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcchhh--ccC---------CCCcc
Confidence            9999999864221   2234445667889999988888877542  135669999999655  221         12234


Q ss_pred             hh-HHHHHHHHHHHHhcc---CCCCeEEEEEecEEEeCCCCcccchHHHHHHHhCCCCCCCCcceecccHHHHHHHHHHH
Q 018503          193 DY-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEA  268 (355)
Q Consensus       193 ~y-~~k~~~~~~~~~~~~---~~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~  268 (355)
                      .| .+|...+.+...+..   ..+++++.++|+.+..+...................     ....+++.+|+|++++.+
T Consensus       153 ~y~~sK~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~dva~~~~~~  227 (250)
T PRK08063        153 TVGVSKAALEALTRYLAVELAPKGIAVNAVSGGAVDTDALKHFPNREELLEDARAKT-----PAGRMVEPEDVANAVLFL  227 (250)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhHhCeEEEeEecCcccCchhhhccCchHHHHHHhcCC-----CCCCCcCHHHHHHHHHHH
Confidence            57 777766666554443   258999999999997764322111111111111111     112379999999999999


Q ss_pred             HhCCC---CCCceEecCCCc
Q 018503          269 LSNPS---YRGVINGTAPNP  285 (355)
Q Consensus       269 ~~~~~---~~~~~~i~~~~~  285 (355)
                      +..+.   .+..+++.++..
T Consensus       228 ~~~~~~~~~g~~~~~~gg~~  247 (250)
T PRK08063        228 CSPEADMIRGQTIIVDGGRS  247 (250)
T ss_pred             cCchhcCccCCEEEECCCee
Confidence            97643   345777777653

>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.76  E-value=1.4e-17  Score=143.99  Aligned_cols=221  Identities=15%  Similarity=0.070  Sum_probs=142.4

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCch-hhcc----CCCCCCccCCCeeecCCcchhhhcC-------CC
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSK-AELI----FPGKKTRFFPGVMIAEEPQWRDCIQ-------GS  117 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~-~~~~----~~~~~~~~~~~~d~~~~~~~~~~~~-------~~  117 (355)
                      +++||||||+|+||++++++|+++|++|++..|+... ....    ...........+|+.+.+++.++++       ++
T Consensus         6 ~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   85 (252)
T PRK06077          6 DKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKENGGEGIGVLADVSTREGCETLAKATIDRYGVA   85 (252)
T ss_pred             CcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHcCCeeEEEEeccCCHHHHHHHHHHHHHHcCCC
Confidence            4689999999999999999999999999887765322 1110    0000000133468888777665543       68


Q ss_pred             cEEEECCCCCCCC---CCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCChh
Q 018503          118 TAVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY  194 (355)
Q Consensus       118 d~vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~~y  194 (355)
                      |+|||+||.....   ....+..+..+++|+.+...+++++.......+++|++||...  |..         .++...|
T Consensus        86 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~sS~~~--~~~---------~~~~~~Y  154 (252)
T PRK06077         86 DILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREGGAIVNIASVAG--IRP---------AYGLSIY  154 (252)
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcCcEEEEEcchhc--cCC---------CCCchHH
Confidence            9999999963221   1233344678899999999998887652112358999999766  432         2234567


Q ss_pred             -HHHHHHHHHHHHhccCC--CCeEEEEEecEEEeCCCCcccchHHH-HHHHhCCCCCCCCcceecccHHHHHHHHHHHHh
Q 018503          195 -LAEVCREWEGTALKVNK--DVRLALIRIGIVLGKDGGALAKMIPL-FMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALS  270 (355)
Q Consensus       195 -~~k~~~~~~~~~~~~~~--~~~~~i~Rp~~i~G~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~  270 (355)
                       .+|...+.+...+..+.  ++.+.+++|+.+.++........... ......    .......+++++|+|++++.++.
T Consensus       155 ~~sK~~~~~~~~~l~~~~~~~i~v~~v~Pg~i~t~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~dva~~~~~~~~  230 (252)
T PRK06077        155 GAMKAAVINLTKYLALELAPKIRVNAIAPGFVKTKLGESLFKVLGMSEKEFAE----KFTLMGKILDPEEVAEFVAAILK  230 (252)
T ss_pred             HHHHHHHHHHHHHHHHHHhcCCEEEEEeeCCccChHHHhhhhcccccHHHHHH----hcCcCCCCCCHHHHHHHHHHHhC
Confidence             77777666666554432  78999999999977642111000000 000000    01112368999999999999997


Q ss_pred             CCC-CCCceEecCCCc
Q 018503          271 NPS-YRGVINGTAPNP  285 (355)
Q Consensus       271 ~~~-~~~~~~i~~~~~  285 (355)
                      .+. .++.|++.+|..
T Consensus       231 ~~~~~g~~~~i~~g~~  246 (252)
T PRK06077        231 IESITGQVFVLDSGES  246 (252)
T ss_pred             ccccCCCeEEecCCee
Confidence            654 456899998863

>PRK06179 short chain dehydrogenase; Provisional

Probab=99.76  E-value=2.5e-17  Score=143.80  Aligned_cols=214  Identities=13%  Similarity=0.075  Sum_probs=141.1

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcC-------CCcEEEE
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ-------GSTAVVN  122 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-------~~d~vi~  122 (355)
                      +++|+||||+|+||++++++|+++|++|++++|+..........    ....+|+.|++++.++++       .+|++||
T Consensus         4 ~~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~----~~~~~D~~d~~~~~~~~~~~~~~~g~~d~li~   79 (270)
T PRK06179          4 SKVALVTGASSGIGRATAEKLARAGYRVFGTSRNPARAAPIPGV----ELLELDVTDDASVQAAVDEVIARAGRIDVLVN   79 (270)
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCChhhccccCCC----eeEEeecCCHHHHHHHHHHHHHhCCCCCEEEE
Confidence            46899999999999999999999999999999987554332111    144679999998887775       4799999


Q ss_pred             CCCCCCC---CCCChhhHHHHHHHhhhhHHHHHHHH----HcCCCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCChh-
Q 018503          123 LAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLI----NESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-  194 (355)
Q Consensus       123 ~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~----~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~~y-  194 (355)
                      +||....   .....+.....+++|+.++..+++++    ++  .+.+++|++||...  +..         .+....| 
T Consensus        80 ~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~--~~~~~iv~isS~~~--~~~---------~~~~~~Y~  146 (270)
T PRK06179         80 NAGVGLAGAAEESSIAQAQALFDTNVFGILRMTRAVLPHMRA--QGSGRIINISSVLG--FLP---------APYMALYA  146 (270)
T ss_pred             CCCCCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh--cCCceEEEECCccc--cCC---------CCCccHHH
Confidence            9997432   22345667888999999988888875    44  56789999999755  321         1223457 


Q ss_pred             HHHHHHHHHHHHhcc---CCCCeEEEEEecEEEeCCCCccc---chHHHHHHHhC-CCCCCCCcceecccHHHHHHHHHH
Q 018503          195 LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALA---KMIPLFMMFAG-GPLGSGQQWFSWIHLDDIVNLIYE  267 (355)
Q Consensus       195 ~~k~~~~~~~~~~~~---~~~~~~~i~Rp~~i~G~~~~~~~---~~~~~~~~~~~-~~~~~~~~~~~~i~v~Dva~~~~~  267 (355)
                      .+|...+.+.+.+..   ..|+++++++|+.+.++......   ........... ...............+|+|+.++.
T Consensus       147 ~sK~a~~~~~~~l~~el~~~gi~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~  226 (270)
T PRK06179        147 ASKHAVEGYSESLDHEVRQFGIRVSLVEPAYTKTNFDANAPEPDSPLAEYDRERAVVSKAVAKAVKKADAPEVVADTVVK  226 (270)
T ss_pred             HHHHHHHHHHHHHHHHHhhhCcEEEEEeCCCcccccccccCCCCCcchhhHHHHHHHHHHHHhccccCCCHHHHHHHHHH
Confidence            677666655444332   35999999999999876432110   00000000000 000000011124678999999999


Q ss_pred             HHhCCCCCCceEe
Q 018503          268 ALSNPSYRGVING  280 (355)
Q Consensus       268 ~~~~~~~~~~~~i  280 (355)
                      ++..+.....|..
T Consensus       227 ~~~~~~~~~~~~~  239 (270)
T PRK06179        227 AALGPWPKMRYTA  239 (270)
T ss_pred             HHcCCCCCeeEec
Confidence            9987654445543

>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.76  E-value=2.3e-17  Score=142.44  Aligned_cols=218  Identities=18%  Similarity=0.093  Sum_probs=141.8

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCC---CCCccCCCeeecCCcchhhhcC-------CCcE
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG---KKTRFFPGVMIAEEPQWRDCIQ-------GSTA  119 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~---~~~~~~~~~d~~~~~~~~~~~~-------~~d~  119 (355)
                      .++|+||||+|++|++++++|+++|++|++++|++.+.......   ........+|+.|++++.++++       ++|+
T Consensus         5 ~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~   84 (251)
T PRK07231          5 GKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILAGGRAIAVAADVSDEADVEAAVAAALERFGSVDI   84 (251)
T ss_pred             CcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCCCE
Confidence            46899999999999999999999999999999998654332111   0001134578888888876664       5799


Q ss_pred             EEECCCCCCC----CCCChhhHHHHHHHhhhhHHHHHHHHHcC--CCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCCh
Q 018503          120 VVNLAGTPIG----TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGND  193 (355)
Q Consensus       120 vi~~a~~~~~----~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~~  193 (355)
                      |||+++....    .....+.....+++|+.++..+++.+...  ..+.++||++||...  ++..         +....
T Consensus        85 vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~--~~~~---------~~~~~  153 (251)
T PRK07231         85 LVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLWTQAAVPAMRGEGGGAIVNVASTAG--LRPR---------PGLGW  153 (251)
T ss_pred             EEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhh--cCCC---------CCchH
Confidence            9999997422    12345667788999999877777665431  145678999999776  4321         22345


Q ss_pred             h-HHHHHHHHHHHHhcc---CCCCeEEEEEecEEEeCCCCcccc-hHHHH--HHHhCCCCCCCCcceecccHHHHHHHHH
Q 018503          194 Y-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALAK-MIPLF--MMFAGGPLGSGQQWFSWIHLDDIVNLIY  266 (355)
Q Consensus       194 y-~~k~~~~~~~~~~~~---~~~~~~~i~Rp~~i~G~~~~~~~~-~~~~~--~~~~~~~~~~~~~~~~~i~v~Dva~~~~  266 (355)
                      | .+|...+.....+..   ..+++++.++|+.+.++....... ..+..  .....      .....+++++|+|++++
T Consensus       154 y~~sk~~~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~dva~~~~  227 (251)
T PRK07231        154 YNASKGAVITLTKALAAELGPDKIRVNAVAPVVVETGLLEAFMGEPTPENRAKFLAT------IPLGRLGTPEDIANAAL  227 (251)
T ss_pred             HHHHHHHHHHHHHHHHHHhhhhCeEEEEEEECccCCCcchhhhcccChHHHHHHhcC------CCCCCCcCHHHHHHHHH
Confidence            6 666555544443332   238999999999986654221100 00011  11111      11234789999999999


Q ss_pred             HHHhCCC--CCC-ceEecCCC
Q 018503          267 EALSNPS--YRG-VINGTAPN  284 (355)
Q Consensus       267 ~~~~~~~--~~~-~~~i~~~~  284 (355)
                      .++..+.  ..| .+.+.++.
T Consensus       228 ~l~~~~~~~~~g~~~~~~gg~  248 (251)
T PRK07231        228 FLASDEASWITGVTLVVDGGR  248 (251)
T ss_pred             HHhCccccCCCCCeEEECCCc
Confidence            9997653  234 56666554

>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

Probab=99.76  E-value=4.4e-17  Score=140.61  Aligned_cols=216  Identities=15%  Similarity=0.063  Sum_probs=142.1

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCC----CCCccCCCeeecCCcchhhhcC-------CCc
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG----KKTRFFPGVMIAEEPQWRDCIQ-------GST  118 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~----~~~~~~~~~d~~~~~~~~~~~~-------~~d  118 (355)
                      +++||||||+|+||++++++|++.|++|++++|+.+........    ........+|+.|.+++.++++       ++|
T Consensus         3 ~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~d   82 (250)
T TIGR03206         3 DKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAKGGNAQAFACDITDRDSVDTAVAAAEQALGPVD   82 (250)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence            47899999999999999999999999999999987654322110    0001134578888887776653       589


Q ss_pred             EEEECCCCCCCC---CCChhhHHHHHHHhhhhHHHHHHHHHcC--CCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCCh
Q 018503          119 AVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGND  193 (355)
Q Consensus       119 ~vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~~  193 (355)
                      +|||+++.....   ....+.....+++|+.++..+++++...  ..+.+++|++||...  +...         +....
T Consensus        83 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~iss~~~--~~~~---------~~~~~  151 (250)
T TIGR03206        83 VLVNNAGWDKFGPFTKTEPPLWERLIAINLTGALHMHHAVLPGMVERGAGRIVNIASDAA--RVGS---------SGEAV  151 (250)
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEECchhh--ccCC---------CCCch
Confidence            999999864221   2234445678999999999988876421  145678999999876  4322         12345


Q ss_pred             h-HHHHHHHHHHHHhccC---CCCeEEEEEecEEEeCCCCcc-------cchHHHHHHHhCCCCCCCCcceecccHHHHH
Q 018503          194 Y-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGAL-------AKMIPLFMMFAGGPLGSGQQWFSWIHLDDIV  262 (355)
Q Consensus       194 y-~~k~~~~~~~~~~~~~---~~~~~~i~Rp~~i~G~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva  262 (355)
                      | .+|...+.....+..+   .++++++++|+.++++.....       ..+..  ......+.      ..+...+|+|
T Consensus       152 Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pg~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~------~~~~~~~dva  223 (250)
T TIGR03206       152 YAACKGGLVAFSKTMAREHARHGITVNVVCPGPTDTALLDDICGGAENPEKLRE--AFTRAIPL------GRLGQPDDLP  223 (250)
T ss_pred             HHHHHHHHHHHHHHHHHHHhHhCcEEEEEecCcccchhHHhhhhccCChHHHHH--HHHhcCCc------cCCcCHHHHH
Confidence            7 6675554444444332   389999999999988742211       00111  11111111      1256789999


Q ss_pred             HHHHHHHhCCC---CCCceEecCCC
Q 018503          263 NLIYEALSNPS---YRGVINGTAPN  284 (355)
Q Consensus       263 ~~~~~~~~~~~---~~~~~~i~~~~  284 (355)
                      +++..++..+.   .+..+++.+|.
T Consensus       224 ~~~~~l~~~~~~~~~g~~~~~~~g~  248 (250)
T TIGR03206       224 GAILFFSSDDASFITGQVLSVSGGL  248 (250)
T ss_pred             HHHHHHcCcccCCCcCcEEEeCCCc
Confidence            99999987654   34588887653

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.

>PRK07577 short chain dehydrogenase; Provisional

Probab=99.76  E-value=8.6e-17  Score=137.38  Aligned_cols=210  Identities=18%  Similarity=0.102  Sum_probs=139.4

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcC------CCcEEEEC
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ------GSTAVVNL  123 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~------~~d~vi~~  123 (355)
                      .|+|+||||+|+||++++++|+++|++|++++|+.....  ..     ....+|+.|.+++.++++      ++|+|||+
T Consensus         3 ~k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~~~~~~--~~-----~~~~~D~~~~~~~~~~~~~~~~~~~~d~vi~~   75 (234)
T PRK07577          3 SRTVLVTGATKGIGLALSLRLANLGHQVIGIARSAIDDF--PG-----ELFACDLADIEQTAATLAQINEIHPVDAIVNN   75 (234)
T ss_pred             CCEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCccccc--Cc-----eEEEeeCCCHHHHHHHHHHHHHhCCCcEEEEC
Confidence            478999999999999999999999999999999876521  11     144579999887776664      68999999


Q ss_pred             CCCCCCCC---CChhhHHHHHHHhhhhHHHHHHHHHcC--CCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCChh-HHH
Q 018503          124 AGTPIGTR---WSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-LAE  197 (355)
Q Consensus       124 a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~~y-~~k  197 (355)
                      ++......   ...+.....++.|+.++..+.+++...  ..+.+++|++||...  |+.          +....| .+|
T Consensus        76 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~--~~~----------~~~~~Y~~sK  143 (234)
T PRK07577         76 VGIALPQPLGKIDLAALQDVYDLNVRAAVQVTQAFLEGMKLREQGRIVNICSRAI--FGA----------LDRTSYSAAK  143 (234)
T ss_pred             CCCCCCCChHHCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccccc--cCC----------CCchHHHHHH
Confidence            99743322   234556778889999987776655321  145678999999865  542          123457 677


Q ss_pred             HHHHHHHHHhcc---CCCCeEEEEEecEEEeCCCCcccchHHHH--HHHhCCCCCCCCcceecccHHHHHHHHHHHHhCC
Q 018503          198 VCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALAKMIPLF--MMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNP  272 (355)
Q Consensus       198 ~~~~~~~~~~~~---~~~~~~~i~Rp~~i~G~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~  272 (355)
                      ...+.+.+.+..   ..|++++.++|+.+..+.........+..  ......+.      -.+...+|+|.+++.++..+
T Consensus       144 ~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~a~~~~~l~~~~  217 (234)
T PRK07577        144 SALVGCTRTWALELAEYGITVNAVAPGPIETELFRQTRPVGSEEEKRVLASIPM------RRLGTPEEVAAAIAFLLSDD  217 (234)
T ss_pred             HHHHHHHHHHHHHHHhhCcEEEEEecCcccCcccccccccchhHHHHHhhcCCC------CCCcCHHHHHHHHHHHhCcc
Confidence            665555443332   35899999999999876421110000101  11111111      12457899999999999765


Q ss_pred             C---CCCceEecCCC
Q 018503          273 S---YRGVINGTAPN  284 (355)
Q Consensus       273 ~---~~~~~~i~~~~  284 (355)
                      .   .+..+.+.++.
T Consensus       218 ~~~~~g~~~~~~g~~  232 (234)
T PRK07577        218 AGFITGQVLGVDGGG  232 (234)
T ss_pred             cCCccceEEEecCCc
Confidence            3   23466666553

>PRK06194 hypothetical protein; Provisional

Probab=99.76  E-value=1.9e-17  Score=145.84  Aligned_cols=215  Identities=11%  Similarity=-0.039  Sum_probs=141.5

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCC----CCCCccCCCeeecCCcchhhhcC-------CCc
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP----GKKTRFFPGVMIAEEPQWRDCIQ-------GST  118 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~~d~~~~~~~~~~~~-------~~d  118 (355)
                      +++||||||+|+||++++++|+++|++|++++|+.+.......    .........+|+.|.+++.++++       ++|
T Consensus         6 ~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~id   85 (287)
T PRK06194          6 GKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSDAAQVEALADAALERFGAVH   85 (287)
T ss_pred             CCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence            4789999999999999999999999999999997654332211    01001124578888888877664       479


Q ss_pred             EEEECCCCCCCC---CCChhhHHHHHHHhhhhHHHHHHHH----HcCCCCC------CcEEEEeeeeeeeeCCCCCcccc
Q 018503          119 AVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLI----NESPEGV------RPSVLVSATALGYYGTSETEVFD  185 (355)
Q Consensus       119 ~vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~a~----~~~~~~~------~~~v~~Ss~~~~~yg~~~~~~~~  185 (355)
                      +|||+||.....   ....+.+...+++|+.++.++++++    .+  .+.      +++|++||...  +...      
T Consensus        86 ~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~--~~~~~~~~~g~iv~~sS~~~--~~~~------  155 (287)
T PRK06194         86 LLFNNAGVGAGGLVWENSLADWEWVLGVNLWGVIHGVRAFTPLMLA--AAEKDPAYEGHIVNTASMAG--LLAP------  155 (287)
T ss_pred             EEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHh--cCCCCCCCCeEEEEeCChhh--ccCC------
Confidence            999999975332   2344666778999999998877764    33  222      58999999766  3321      


Q ss_pred             CCCCCCChh-HHHHHHHHHHHHhccC-----CCCeEEEEEecEEEeCCCCcccchHHHHHHHhCCC---CCCCCcceecc
Q 018503          186 ESSPSGNDY-LAEVCREWEGTALKVN-----KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGP---LGSGQQWFSWI  256 (355)
Q Consensus       186 e~~~~~~~y-~~k~~~~~~~~~~~~~-----~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~i  256 (355)
                         +....| .+|...+.+...+..+     .++++..+.|+.+..+....          ..+.+   .+.+.+.++++
T Consensus       156 ---~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~irv~~v~pg~i~t~~~~~----------~~~~~~~~~~~~~~~~~~~  222 (287)
T PRK06194        156 ---PAMGIYNVSKHAVVSLTETLYQDLSLVTDQVGASVLCPYFVPTGIWQS----------ERNRPADLANTAPPTRSQL  222 (287)
T ss_pred             ---CCCcchHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEEeCcccCccccc----------cccCchhcccCccccchhh
Confidence               234567 7787776666554443     24666677776554432110          01111   24556777888


Q ss_pred             cHHHHHHHHHHHHhCCCCCCceEecCCCccCHHHHHHHHHHHhCCC
Q 018503          257 HLDDIVNLIYEALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRP  302 (355)
Q Consensus       257 ~v~Dva~~~~~~~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~  302 (355)
                      +++|.+..+....               .++..|+++.+.+.+...
T Consensus       223 ~~~~~~~~~~~~~---------------~~s~~dva~~i~~~~~~~  253 (287)
T PRK06194        223 IAQAMSQKAVGSG---------------KVTAEEVAQLVFDAIRAG  253 (287)
T ss_pred             HHHHHHHhhhhcc---------------CCCHHHHHHHHHHHHHcC
Confidence            8888877653221               168888888888877543

>PRK06138 short chain dehydrogenase; Provisional

Probab=99.76  E-value=1.4e-17  Score=143.97  Aligned_cols=216  Identities=13%  Similarity=0.054  Sum_probs=142.3

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCC---CCCccCCCeeecCCcchhhhcC-------CCcE
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG---KKTRFFPGVMIAEEPQWRDCIQ-------GSTA  119 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~---~~~~~~~~~d~~~~~~~~~~~~-------~~d~  119 (355)
                      +++++||||+|+||++++++|+++|++|++++|+.+........   ........+|+.|++++.++++       ++|+
T Consensus         5 ~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id~   84 (252)
T PRK06138          5 GRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIAAGGRAFARQGDVGSAEAVEALVDFVAARWGRLDV   84 (252)
T ss_pred             CcEEEEeCCCchHHHHHHHHHHHCCCeEEEecCCHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            46899999999999999999999999999999987644322111   0001134578888888876653       6899


Q ss_pred             EEECCCCCCC---CCCChhhHHHHHHHhhhhHHHHHHHH----HcCCCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCC
Q 018503          120 VVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLI----NESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGN  192 (355)
Q Consensus       120 vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~----~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~  192 (355)
                      |||+++....   .....+.....+++|+.++.++.+++    ++  .+.++++++||.... ++.          +..+
T Consensus        85 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~~~~~ii~~sS~~~~-~~~----------~~~~  151 (252)
T PRK06138         85 LVNNAGFGCGGTVVTTDEADWDAVMRVNVGGVFLWAKYAIPIMQR--QGGGSIVNTASQLAL-AGG----------RGRA  151 (252)
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHHHHh--cCCeEEEEECChhhc-cCC----------CCcc
Confidence            9999997432   22345556778899999987776655    34  466789999997552 331          2235


Q ss_pred             hh-HHHHHHHHHHHHhccC---CCCeEEEEEecEEEeCCCCcccc-h--HHHH-HHHhCCCCCCCCcceecccHHHHHHH
Q 018503          193 DY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAK-M--IPLF-MMFAGGPLGSGQQWFSWIHLDDIVNL  264 (355)
Q Consensus       193 ~y-~~k~~~~~~~~~~~~~---~~~~~~i~Rp~~i~G~~~~~~~~-~--~~~~-~~~~~~~~~~~~~~~~~i~v~Dva~~  264 (355)
                      .| .+|...+.+...+..+   .+++++++||+.++++....... .  ...+ ......     .....+++.+|+|++
T Consensus       152 ~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~d~a~~  226 (252)
T PRK06138        152 AYVASKGAIASLTRAMALDHATDGIRVNAVAPGTIDTPYFRRIFARHADPEALREALRAR-----HPMNRFGTAEEVAQA  226 (252)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcCeEEEEEEECCccCcchhhhhccccChHHHHHHHHhc-----CCCCCCcCHHHHHHH
Confidence            57 7777666665555433   38999999999998875321100 0  0001 111110     111237899999999


Q ss_pred             HHHHHhCCC--CCC-ceEecCC
Q 018503          265 IYEALSNPS--YRG-VINGTAP  283 (355)
Q Consensus       265 ~~~~~~~~~--~~~-~~~i~~~  283 (355)
                      ++.++..+.  ..| .+.+.++
T Consensus       227 ~~~l~~~~~~~~~g~~~~~~~g  248 (252)
T PRK06138        227 ALFLASDESSFATGTTLVVDGG  248 (252)
T ss_pred             HHHHcCchhcCccCCEEEECCC
Confidence            999998754  234 5555544

>PRK07890 short chain dehydrogenase; Provisional

Probab=99.76  E-value=8e-18  Score=145.95  Aligned_cols=219  Identities=14%  Similarity=0.128  Sum_probs=143.6

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCC----CCCccCCCeeecCCcchhhhc-------CCCc
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG----KKTRFFPGVMIAEEPQWRDCI-------QGST  118 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~----~~~~~~~~~d~~~~~~~~~~~-------~~~d  118 (355)
                      .|+|+||||+|+||++++++|+++|++|++++|++.........    ........+|+.|.+++.+++       .++|
T Consensus         5 ~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~d   84 (258)
T PRK07890          5 GKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDLGRRALAVPTDITDEDQCANLVALALERFGRVD   84 (258)
T ss_pred             CCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHHHcCCcc
Confidence            47899999999999999999999999999999987654322111    000113457888888776555       3679


Q ss_pred             EEEECCCCCCC----CCCChhhHHHHHHHhhhhHHHHHHHHHcC-CCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCCh
Q 018503          119 AVVNLAGTPIG----TRWSSEIKKEIKESRIRVTSKVVDLINES-PEGVRPSVLVSATALGYYGTSETEVFDESSPSGND  193 (355)
Q Consensus       119 ~vi~~a~~~~~----~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~~  193 (355)
                      +|||+||....    .....+.+...++.|+.++..+++++... ....+++|++||...  +..         .+..+.
T Consensus        85 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~ii~~sS~~~--~~~---------~~~~~~  153 (258)
T PRK07890         85 ALVNNAFRVPSMKPLADADFAHWRAVIELNVLGTLRLTQAFTPALAESGGSIVMINSMVL--RHS---------QPKYGA  153 (258)
T ss_pred             EEEECCccCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCEEEEEechhh--ccC---------CCCcch
Confidence            99999986422    13345677888999999999999988642 112358999998765  221         123456


Q ss_pred             h-HHHHHHHHHHHHhccC---CCCeEEEEEecEEEeCCCCcc-cch--------HHHHHHHhCCCCCCCCcceecccHHH
Q 018503          194 Y-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGAL-AKM--------IPLFMMFAGGPLGSGQQWFSWIHLDD  260 (355)
Q Consensus       194 y-~~k~~~~~~~~~~~~~---~~~~~~i~Rp~~i~G~~~~~~-~~~--------~~~~~~~~~~~~~~~~~~~~~i~v~D  260 (355)
                      | .+|...+.+...+..+   .+++++.++|+.++++..... ...        ........     .......+.+++|
T Consensus       154 Y~~sK~a~~~l~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~d  228 (258)
T PRK07890        154 YKMAKGALLAASQSLATELGPQGIRVNSVAPGYIWGDPLKGYFRHQAGKYGVTVEQIYAETA-----ANSDLKRLPTDDE  228 (258)
T ss_pred             hHHHHHHHHHHHHHHHHHHhhcCcEEEEEeCCccCcHHHHHHhhhcccccCCCHHHHHHHHh-----hcCCccccCCHHH
Confidence            7 7777666666555432   489999999999999853211 000        00000000     0111224788999


Q ss_pred             HHHHHHHHHhCCC---CCCceEecCCC
Q 018503          261 IVNLIYEALSNPS---YRGVINGTAPN  284 (355)
Q Consensus       261 va~~~~~~~~~~~---~~~~~~i~~~~  284 (355)
                      +|++++.++....   .+..+.+.++.
T Consensus       229 va~a~~~l~~~~~~~~~G~~i~~~gg~  255 (258)
T PRK07890        229 VASAVLFLASDLARAITGQTLDVNCGE  255 (258)
T ss_pred             HHHHHHHHcCHhhhCccCcEEEeCCcc
Confidence            9999999987532   33355555553

>PRK07060 short chain dehydrogenase; Provisional

Probab=99.76  E-value=4.6e-17  Score=140.03  Aligned_cols=218  Identities=18%  Similarity=0.109  Sum_probs=145.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcC---CCcEEEECCC
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ---GSTAVVNLAG  125 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~---~~d~vi~~a~  125 (355)
                      +.++++||||+|++|+++++.|+++|++|++++|+.+....+..... .....+|+.+.+.+.++++   ++|+|||+||
T Consensus         8 ~~~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~D~~~~~~v~~~~~~~~~~d~vi~~ag   86 (245)
T PRK07060          8 SGKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRLAGETG-CEPLRLDVGDDAAIRAALAAAGAFDGLVNCAG   86 (245)
T ss_pred             CCCEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC-CeEEEecCCCHHHHHHHHHHhCCCCEEEECCC
Confidence            34689999999999999999999999999999998765433221110 0134468888887777664   5899999999


Q ss_pred             CCCC---CCCChhhHHHHHHHhhhhHHHHHHHHHcC--CCC-CCcEEEEeeeeeeeeCCCCCccccCCCCCCChh-HHHH
Q 018503          126 TPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEG-VRPSVLVSATALGYYGTSETEVFDESSPSGNDY-LAEV  198 (355)
Q Consensus       126 ~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~-~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~~y-~~k~  198 (355)
                      ....   .....+.....+..|+.++.++++++...  ..+ .+++|++||...  +...         +....| .+|.
T Consensus        87 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~--~~~~---------~~~~~y~~sK~  155 (245)
T PRK07060         87 IASLESALDMTAEGFDRVMAVNARGAALVARHVARAMIAAGRGGSIVNVSSQAA--LVGL---------PDHLAYCASKA  155 (245)
T ss_pred             CCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCcEEEEEccHHH--cCCC---------CCCcHhHHHHH
Confidence            7422   12344556778889999999999887652  122 368999998765  3211         123457 7777


Q ss_pred             HHHHHHHHhccC---CCCeEEEEEecEEEeCCCC-cccchHHHHHHHhCCCCCCCCcceecccHHHHHHHHHHHHhCCC-
Q 018503          199 CREWEGTALKVN---KDVRLALIRIGIVLGKDGG-ALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPS-  273 (355)
Q Consensus       199 ~~~~~~~~~~~~---~~~~~~i~Rp~~i~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~-  273 (355)
                      ..+...+.+..+   .+++++.+||+.++++... .+.............      ....+++++|+|++++.++..+. 
T Consensus       156 a~~~~~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~d~a~~~~~l~~~~~~  229 (245)
T PRK07060        156 ALDAITRVLCVELGPHGIRVNSVNPTVTLTPMAAEAWSDPQKSGPMLAAI------PLGRFAEVDDVAAPILFLLSDAAS  229 (245)
T ss_pred             HHHHHHHHHHHHHhhhCeEEEEEeeCCCCCchhhhhccCHHHHHHHHhcC------CCCCCCCHHHHHHHHHHHcCcccC
Confidence            666655554432   4899999999999887532 111111101111111      12348999999999999998654 


Q ss_pred             --CCCceEecCCC
Q 018503          274 --YRGVINGTAPN  284 (355)
Q Consensus       274 --~~~~~~i~~~~  284 (355)
                        .+..+++.+|.
T Consensus       230 ~~~G~~~~~~~g~  242 (245)
T PRK07060        230 MVSGVSLPVDGGY  242 (245)
T ss_pred             CccCcEEeECCCc
Confidence              34467666553

>PRK05993 short chain dehydrogenase; Provisional

Probab=99.75  E-value=4.5e-17  Score=142.63  Aligned_cols=214  Identities=16%  Similarity=0.107  Sum_probs=138.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcC--------CCcEE
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ--------GSTAV  120 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--------~~d~v  120 (355)
                      ++++|+||||+|+||+++++.|+++|++|++++|+.+....+.....  ....+|+.|.+++.++++        .+|++
T Consensus         3 ~~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~~~~~~~l~~~~~--~~~~~Dl~d~~~~~~~~~~~~~~~~g~id~l   80 (277)
T PRK05993          3 MKRSILITGCSSGIGAYCARALQSDGWRVFATCRKEEDVAALEAEGL--EAFQLDYAEPESIAALVAQVLELSGGRLDAL   80 (277)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCc--eEEEccCCCHHHHHHHHHHHHHHcCCCccEE
Confidence            34689999999999999999999999999999998766544322110  134578888887765543        47999


Q ss_pred             EECCCCCCCC---CCChhhHHHHHHHhhhh----HHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCCh
Q 018503          121 VNLAGTPIGT---RWSSEIKKEIKESRIRV----TSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGND  193 (355)
Q Consensus       121 i~~a~~~~~~---~~~~~~~~~~~~~n~~~----~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~~  193 (355)
                      ||+||.....   ..+.+.....+++|+.+    +..+++.+++  .+.+++|++||...  +..         .+....
T Consensus        81 i~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~--~~~g~iv~isS~~~--~~~---------~~~~~~  147 (277)
T PRK05993         81 FNNGAYGQPGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRK--QGQGRIVQCSSILG--LVP---------MKYRGA  147 (277)
T ss_pred             EECCCcCCCCCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhh--cCCCEEEEECChhh--cCC---------CCccch
Confidence            9999874322   23445567888999999    5556666666  56779999998654  221         223456


Q ss_pred             h-HHHHHHHHHHHHhc---cCCCCeEEEEEecEEEeCCCCcc-cchHH---------------HHHHHhCCCCCCCCcce
Q 018503          194 Y-LAEVCREWEGTALK---VNKDVRLALIRIGIVLGKDGGAL-AKMIP---------------LFMMFAGGPLGSGQQWF  253 (355)
Q Consensus       194 y-~~k~~~~~~~~~~~---~~~~~~~~i~Rp~~i~G~~~~~~-~~~~~---------------~~~~~~~~~~~~~~~~~  253 (355)
                      | .+|...+.+.+.+.   ...|+++++++||.+..+..... ..+..               .........    ....
T Consensus       148 Y~asK~a~~~~~~~l~~el~~~gi~v~~v~Pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~  223 (277)
T PRK05993        148 YNASKFAIEGLSLTLRMELQGSGIHVSLIEPGPIETRFRANALAAFKRWIDIENSVHRAAYQQQMARLEGGG----SKSR  223 (277)
T ss_pred             HHHHHHHHHHHHHHHHHHhhhhCCEEEEEecCCccCchhhHHHHHHhhhhccccchhHHHHHHHHHHHHhhh----hccc
Confidence            7 77877666655443   23589999999998876532110 00000               000000000    0011


Q ss_pred             ecccHHHHHHHHHHHHhCCCCCCceEec
Q 018503          254 SWIHLDDIVNLIYEALSNPSYRGVINGT  281 (355)
Q Consensus       254 ~~i~v~Dva~~~~~~~~~~~~~~~~~i~  281 (355)
                      ..+..+++|+.++.++..+.....|.++
T Consensus       224 ~~~~~~~va~~i~~a~~~~~~~~~~~~~  251 (277)
T PRK05993        224 FKLGPEAVYAVLLHALTAPRPRPHYRVT  251 (277)
T ss_pred             cCCCHHHHHHHHHHHHcCCCCCCeeeeC
Confidence            1367899999999999876533345443

>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

Probab=99.75  E-value=9.7e-17  Score=131.27  Aligned_cols=205  Identities=14%  Similarity=0.126  Sum_probs=144.5

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCC--CccCCCeeecCCcchhhhc-------CCCcEE
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKK--TRFFPGVMIAEEPQWRDCI-------QGSTAV  120 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~--~~~~~~~d~~~~~~~~~~~-------~~~d~v  120 (355)
                      .|.++|||||+.||.++++.|.+.|++|+.+.|+.+...++.....  ......+|++|.+++.+++       .++|++
T Consensus         6 ~kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~~~~~~~~~~~DVtD~~~~~~~i~~~~~~~g~iDiL   85 (246)
T COG4221           6 GKVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGAGAALALALDVTDRAAVEAAIEALPEEFGRIDIL   85 (246)
T ss_pred             CcEEEEecCcchHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHhhccCceEEEeeccCCHHHHHHHHHHHHHhhCcccEE
Confidence            4689999999999999999999999999999999998776654322  1224458999998865554       368999


Q ss_pred             EECCCCCCC---CCCChhhHHHHHHHhhhhHHHHHHHHHcC--CCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCChh-
Q 018503          121 VNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-  194 (355)
Q Consensus       121 i~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~~y-  194 (355)
                      ||+||....   .....+++...+++|+.|..+..+++.-.  ..+..++|.+||.+..           ..++-.+.| 
T Consensus        86 vNNAGl~~g~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r~~G~IiN~~SiAG~-----------~~y~~~~vY~  154 (246)
T COG4221          86 VNNAGLALGDPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVERKSGHIINLGSIAGR-----------YPYPGGAVYG  154 (246)
T ss_pred             EecCCCCcCChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhcCCceEEEecccccc-----------ccCCCCccch
Confidence            999998644   34456888999999999988887766321  1355689999998752           223445677 


Q ss_pred             HHHHHHHHHHHHhccC---CCCeEEEEEecEEEeCCCCcc--cchHHHH-HHHhCCCCCCCCcceecccHHHHHHHHHHH
Q 018503          195 LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGAL--AKMIPLF-MMFAGGPLGSGQQWFSWIHLDDIVNLIYEA  268 (355)
Q Consensus       195 ~~k~~~~~~~~~~~~~---~~~~~~i~Rp~~i~G~~~~~~--~~~~~~~-~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~  268 (355)
                      .+|..-..+.+..+.+   .+++++.+-||.+-.......  ..-.... ...         .....+..+|+|+++.++
T Consensus       155 ATK~aV~~fs~~LR~e~~g~~IRVt~I~PG~v~~~~~s~v~~~g~~~~~~~~y---------~~~~~l~p~dIA~~V~~~  225 (246)
T COG4221         155 ATKAAVRAFSLGLRQELAGTGIRVTVISPGLVETTEFSTVRFEGDDERADKVY---------KGGTALTPEDIAEAVLFA  225 (246)
T ss_pred             hhHHHHHHHHHHHHHHhcCCCeeEEEecCceecceecccccCCchhhhHHHHh---------ccCCCCCHHHHHHHHHHH
Confidence            6776655554444433   489999999998855421111  0000000 111         123479999999999999


Q ss_pred             HhCCCC
Q 018503          269 LSNPSY  274 (355)
Q Consensus       269 ~~~~~~  274 (355)
                      ++.|..
T Consensus       226 ~~~P~~  231 (246)
T COG4221         226 ATQPQH  231 (246)
T ss_pred             HhCCCc
Confidence            999873

>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

Probab=99.75  E-value=4.4e-17  Score=140.79  Aligned_cols=218  Identities=13%  Similarity=-0.051  Sum_probs=141.1

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcC-------CCcEEEE
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ-------GSTAVVN  122 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-------~~d~vi~  122 (355)
                      .+++|||||+|+||++++++|+++|++|++++|+....  ....   .....+|+.+.+++.++++       .+|+|||
T Consensus         8 ~k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~~~~~--~~~~---~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~   82 (252)
T PRK08220          8 GKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAFLTQ--EDYP---FATFVLDVSDAAAVAQVCQRLLAETGPLDVLVN   82 (252)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecchhhh--cCCc---eEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            46899999999999999999999999999999986111  0001   1134578888888877664       4799999


Q ss_pred             CCCCCCC---CCCChhhHHHHHHHhhhhHHHHHHHHHcC--CCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCChh-HH
Q 018503          123 LAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-LA  196 (355)
Q Consensus       123 ~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~~y-~~  196 (355)
                      +++....   .....+.+...+++|+.++..+++++...  ..+.+++|++||...  ...         .+....| .+
T Consensus        83 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~ss~~~--~~~---------~~~~~~Y~~s  151 (252)
T PRK08220         83 AAGILRMGATDSLSDEDWQQTFAVNAGGAFNLFRAVMPQFRRQRSGAIVTVGSNAA--HVP---------RIGMAAYGAS  151 (252)
T ss_pred             CCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECCchh--ccC---------CCCCchhHHH
Confidence            9997432   12345667788999999999998887431  134568999998754  211         1223456 67


Q ss_pred             HHHHHHHHHHhccC---CCCeEEEEEecEEEeCCCCcccc--hH-HHHHHHhCCCCCCCCcceecccHHHHHHHHHHHHh
Q 018503          197 EVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAK--MI-PLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALS  270 (355)
Q Consensus       197 k~~~~~~~~~~~~~---~~~~~~i~Rp~~i~G~~~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~  270 (355)
                      |...+.+...+..+   .++++++++|+.++++.......  .. ...................+++++|+|++++.++.
T Consensus       152 K~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~  231 (252)
T PRK08220        152 KAALTSLAKCVGLELAPYGVRCNVVSPGSTDTDMQRTLWVDEDGEQQVIAGFPEQFKLGIPLGKIARPQEIANAVLFLAS  231 (252)
T ss_pred             HHHHHHHHHHHHHHhhHhCeEEEEEecCcCcchhhhhhccchhhhhhhhhhHHHHHhhcCCCcccCCHHHHHHHHHHHhc
Confidence            76666555544443   58999999999999885321100  00 00000000000011122458999999999999997


Q ss_pred             CCC---CCCceEecCC
Q 018503          271 NPS---YRGVINGTAP  283 (355)
Q Consensus       271 ~~~---~~~~~~i~~~  283 (355)
                      ...   .+....+.+|
T Consensus       232 ~~~~~~~g~~i~~~gg  247 (252)
T PRK08220        232 DLASHITLQDIVVDGG  247 (252)
T ss_pred             chhcCccCcEEEECCC
Confidence            543   3335555554

>PRK09186 flagellin modification protein A; Provisional

Probab=99.75  E-value=5e-17  Score=140.77  Aligned_cols=221  Identities=15%  Similarity=0.087  Sum_probs=139.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccC----CC--CCCccCCCeeecCCcchhhhcC-------
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIF----PG--KKTRFFPGVMIAEEPQWRDCIQ-------  115 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~~--~~~~~~~~~d~~~~~~~~~~~~-------  115 (355)
                      +.|+|+||||+|+||+++++.|++.|++|++++|+.+......    ..  ........+|+.|++++.++++       
T Consensus         3 ~~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~   82 (256)
T PRK09186          3 KGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQESLEEFLSKSAEKYG   82 (256)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcC
Confidence            3579999999999999999999999999999999876543221    00  0000122568989888877664       


Q ss_pred             CCcEEEECCCCCCC------CCCChhhHHHHHHHhhhhHHHHHHHHHcC--CCCCCcEEEEeeeeeeeeCCCCCccccCC
Q 018503          116 GSTAVVNLAGTPIG------TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDES  187 (355)
Q Consensus       116 ~~d~vi~~a~~~~~------~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~  187 (355)
                      .+|+|||+|+....      ...+.+.....+++|+.++..+++++...  ..+.+++|++||...  +..... ...+.
T Consensus        83 ~id~vi~~A~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~--~~~~~~-~~~~~  159 (256)
T PRK09186         83 KIDGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLGSSFLFSQQFAKYFKKQGGGNLVNISSIYG--VVAPKF-EIYEG  159 (256)
T ss_pred             CccEEEECCccccccccCccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCceEEEEechhh--hccccc-hhccc
Confidence            37999999974211      12334556777888988877666554331  145679999999765  321111 11122


Q ss_pred             CCC--CChh-HHHHHHHHHHHHhcc---CCCCeEEEEEecEEEeCCCCcccchHHHHHHHhCCCCCCCCcceecccHHHH
Q 018503          188 SPS--GNDY-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDI  261 (355)
Q Consensus       188 ~~~--~~~y-~~k~~~~~~~~~~~~---~~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dv  261 (355)
                      .+.  ...| .+|...+.+...+..   ..++++++++|+.++++...   .+...+   ....     ....+++.+|+
T Consensus       160 ~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~i~v~~i~Pg~~~~~~~~---~~~~~~---~~~~-----~~~~~~~~~dv  228 (256)
T PRK09186        160 TSMTSPVEYAAIKAGIIHLTKYLAKYFKDSNIRVNCVSPGGILDNQPE---AFLNAY---KKCC-----NGKGMLDPDDI  228 (256)
T ss_pred             cccCCcchhHHHHHHHHHHHHHHHHHhCcCCeEEEEEecccccCCCCH---HHHHHH---HhcC-----CccCCCCHHHh
Confidence            221  2357 677666666544333   35899999999988765321   111111   1111     11247899999


Q ss_pred             HHHHHHHHhCCC--CCC-ceEecCC
Q 018503          262 VNLIYEALSNPS--YRG-VINGTAP  283 (355)
Q Consensus       262 a~~~~~~~~~~~--~~~-~~~i~~~  283 (355)
                      |++++.++.+..  ..| .+.+.+|
T Consensus       229 a~~~~~l~~~~~~~~~g~~~~~~~g  253 (256)
T PRK09186        229 CGTLVFLLSDQSKYITGQNIIVDDG  253 (256)
T ss_pred             hhhHhheeccccccccCceEEecCC
Confidence            999999997654  234 5555554

>PRK12827 short chain dehydrogenase; Provisional

Probab=99.75  E-value=1.4e-16  Score=137.32  Aligned_cols=213  Identities=15%  Similarity=0.107  Sum_probs=139.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchh----hcc----CCCCCCccCCCeeecCCcchhhhc------
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKA----ELI----FPGKKTRFFPGVMIAEEPQWRDCI------  114 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~----~~~----~~~~~~~~~~~~d~~~~~~~~~~~------  114 (355)
                      ++|+|+||||+|+||+++++.|+++|++|++++|.....    ...    ...........+|+.|.+.+.+++      
T Consensus         5 ~~~~ilItGasg~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   84 (249)
T PRK12827          5 DSRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAAGGKALGLAFDVRDFAATRAALDAGVEE   84 (249)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEcCcccccHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            347999999999999999999999999999987643221    111    000000113457888888777665      


Q ss_pred             -CCCcEEEECCCCCCC---CCCChhhHHHHHHHhhhhHHHHHHHHH-----cCCCCCCcEEEEeeeeeeeeCCCCCcccc
Q 018503          115 -QGSTAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLIN-----ESPEGVRPSVLVSATALGYYGTSETEVFD  185 (355)
Q Consensus       115 -~~~d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~~-----~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~  185 (355)
                       .++|+|||++|....   .....+.+...+++|+.++.++++++.     +  .+.+++|++||...  +..       
T Consensus        85 ~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~~~~~iv~~sS~~~--~~~-------  153 (249)
T PRK12827         85 FGRLDILVNNAGIATDAAFAELSIEEWDDVIDVNLDGFFNVTQAALPPMIRA--RRGGRIVNIASVAG--VRG-------  153 (249)
T ss_pred             hCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhc--CCCeEEEEECCchh--cCC-------
Confidence             368999999997532   223455667888999999999999887     3  45678999999766  321       


Q ss_pred             CCCCCCChh-HHHHHHHHHHHHhcc---CCCCeEEEEEecEEEeCCCCcccchHHHHHHHhCCCCCCCCcceecccHHHH
Q 018503          186 ESSPSGNDY-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDI  261 (355)
Q Consensus       186 e~~~~~~~y-~~k~~~~~~~~~~~~---~~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dv  261 (355)
                        .+....| .+|...+.+...+..   ..+++++++||+.+.++.....  . +.-......+.      ..+.+.+|+
T Consensus       154 --~~~~~~y~~sK~a~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~~--~-~~~~~~~~~~~------~~~~~~~~v  222 (249)
T PRK12827        154 --NRGQVNYAASKAGLIGLTKTLANELAPRGITVNAVAPGAINTPMADNA--A-PTEHLLNPVPV------QRLGEPDEV  222 (249)
T ss_pred             --CCCCchhHHHHHHHHHHHHHHHHHhhhhCcEEEEEEECCcCCCccccc--c-hHHHHHhhCCC------cCCcCHHHH
Confidence              1223456 666655544443332   2489999999999998753221  1 10111111111      124588999


Q ss_pred             HHHHHHHHhCCC---CCCceEecCC
Q 018503          262 VNLIYEALSNPS---YRGVINGTAP  283 (355)
Q Consensus       262 a~~~~~~~~~~~---~~~~~~i~~~  283 (355)
                      |+++..++....   .+..+++.+|
T Consensus       223 a~~~~~l~~~~~~~~~g~~~~~~~g  247 (249)
T PRK12827        223 AALVAFLVSDAASYVTGQVIPVDGG  247 (249)
T ss_pred             HHHHHHHcCcccCCccCcEEEeCCC
Confidence            999999986543   2346777655

>PRK12939 short chain dehydrogenase; Provisional

Probab=99.74  E-value=1.3e-16  Score=137.62  Aligned_cols=217  Identities=13%  Similarity=0.097  Sum_probs=143.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCC----CCCCccCCCeeecCCcchhhhc-------CCC
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP----GKKTRFFPGVMIAEEPQWRDCI-------QGS  117 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~~d~~~~~~~~~~~-------~~~  117 (355)
                      ..++|+||||+|.||++++++|+++|++|++++|++++......    .........+|+.|++++.+++       .++
T Consensus         6 ~~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   85 (250)
T PRK12939          6 AGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAAGGRAHAIAADLADPASVQRFFDAAAAALGGL   85 (250)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            35799999999999999999999999999999998764332211    1100113346888888877666       368


Q ss_pred             cEEEECCCCCCC---CCCChhhHHHHHHHhhhhHHHHHHHHHcC--CCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCC
Q 018503          118 TAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGN  192 (355)
Q Consensus       118 d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~  192 (355)
                      |+|||++|....   .....+.....++.|+.++.++++++...  ..+.+++|++||...  +...         +...
T Consensus        86 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~--~~~~---------~~~~  154 (250)
T PRK12939         86 DGLVNNAGITNSKSATELDIDTWDAVMNVNVRGTFLMLRAALPHLRDSGRGRIVNLASDTA--LWGA---------PKLG  154 (250)
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEECchhh--ccCC---------CCcc
Confidence            999999997432   12234556677889999999998877541  134568999999765  2211         1234


Q ss_pred             hh-HHHHHHHHHHHHhcc---CCCCeEEEEEecEEEeCCCCccc--chHHHHHHHhCCCCCCCCcceecccHHHHHHHHH
Q 018503          193 DY-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALA--KMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIY  266 (355)
Q Consensus       193 ~y-~~k~~~~~~~~~~~~---~~~~~~~i~Rp~~i~G~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~  266 (355)
                      .| .+|...+.+...+..   ..++.++.++||.+..+......  .+...+  ...      .....+++++|+|++++
T Consensus       155 ~y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~--~~~------~~~~~~~~~~dva~~~~  226 (250)
T PRK12939        155 AYVASKGAVIGMTRSLARELGGRGITVNAIAPGLTATEATAYVPADERHAYY--LKG------RALERLQVPDDVAGAVL  226 (250)
T ss_pred             hHHHHHHHHHHHHHHHHHHHhhhCEEEEEEEECCCCCccccccCChHHHHHH--Hhc------CCCCCCCCHHHHHHHHH
Confidence            56 667666555544332   24899999999988766432211  111111  111      12245789999999999


Q ss_pred             HHHhCCC---CCCceEecCCC
Q 018503          267 EALSNPS---YRGVINGTAPN  284 (355)
Q Consensus       267 ~~~~~~~---~~~~~~i~~~~  284 (355)
                      .++..+.   .+..+.+.+|.
T Consensus       227 ~l~~~~~~~~~G~~i~~~gg~  247 (250)
T PRK12939        227 FLLSDAARFVTGQLLPVNGGF  247 (250)
T ss_pred             HHhCccccCccCcEEEECCCc
Confidence            9997643   34477776653

>PLN02253 xanthoxin dehydrogenase

Probab=99.74  E-value=1.1e-16  Score=140.49  Aligned_cols=226  Identities=12%  Similarity=0.027  Sum_probs=147.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCC---CCCccCCCeeecCCcchhhhcC-------CCc
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG---KKTRFFPGVMIAEEPQWRDCIQ-------GST  118 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~---~~~~~~~~~d~~~~~~~~~~~~-------~~d  118 (355)
                      ++++++||||+|+||++++++|+++|++|++++|+.+........   ........+|+.|.+++.++++       ++|
T Consensus        17 ~~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~g~id   96 (280)
T PLN02253         17 LGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSLGGEPNVCFFHCDVTVEDDVSRAVDFTVDKFGTLD   96 (280)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCCCceEEEEeecCCHHHHHHHHHHHHHHhCCCC
Confidence            357899999999999999999999999999999976543322110   0011134579999988877664       689


Q ss_pred             EEEECCCCCCC-----CCCChhhHHHHHHHhhhhHHHHHHHHHcC--CCCCCcEEEEeeeeeeeeCCCCCccccCCCCCC
Q 018503          119 AVVNLAGTPIG-----TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSG  191 (355)
Q Consensus       119 ~vi~~a~~~~~-----~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~  191 (355)
                      ++||+||....     ...+.+++...+++|+.++..+++++...  .....+++++||.... ++.          +..
T Consensus        97 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~ii~isS~~~~-~~~----------~~~  165 (280)
T PLN02253         97 IMVNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGVFLGMKHAARIMIPLKKGSIVSLCSVASA-IGG----------LGP  165 (280)
T ss_pred             EEEECCCcCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCceEEEecChhhc-ccC----------CCC
Confidence            99999997421     12345667889999999999988876531  1234578898886542 331          112


Q ss_pred             Chh-HHHHHHHHHHHHhccC---CCCeEEEEEecEEEeCCCCc-c------cchHHHH-HHHh-CCCCCCCCcceecccH
Q 018503          192 NDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGA-L------AKMIPLF-MMFA-GGPLGSGQQWFSWIHL  258 (355)
Q Consensus       192 ~~y-~~k~~~~~~~~~~~~~---~~~~~~i~Rp~~i~G~~~~~-~------~~~~~~~-~~~~-~~~~~~~~~~~~~i~v  258 (355)
                      ..| .+|...+.+.+.+..+   .++++..++|+.+..+.... .      ......+ .... ..++     ....++.
T Consensus       166 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-----~~~~~~~  240 (280)
T PLN02253        166 HAYTGSKHAVLGLTRSVAAELGKHGIRVNCVSPYAVPTALALAHLPEDERTEDALAGFRAFAGKNANL-----KGVELTV  240 (280)
T ss_pred             cccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccccccccccccccchhhhhhhhHHHhhcCCCC-----cCCCCCH
Confidence            357 7887777776665543   48999999999997763210 0      0011111 0000 1111     1224789


Q ss_pred             HHHHHHHHHHHhCCC---CCCceEecCCCccCHHH
Q 018503          259 DDIVNLIYEALSNPS---YRGVINGTAPNPVRLAE  290 (355)
Q Consensus       259 ~Dva~~~~~~~~~~~---~~~~~~i~~~~~~s~~e  290 (355)
                      +|+|++++.++..+.   .+..+++.+|...+..+
T Consensus       241 ~dva~~~~~l~s~~~~~i~G~~i~vdgG~~~~~~~  275 (280)
T PLN02253        241 DDVANAVLFLASDEARYISGLNLMIDGGFTCTNHS  275 (280)
T ss_pred             HHHHHHHHhhcCcccccccCcEEEECCchhhccch
Confidence            999999999987643   34477887775444433

>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=99.74  E-value=2.1e-16  Score=136.12  Aligned_cols=217  Identities=15%  Similarity=0.124  Sum_probs=138.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchh-hc----cCCCCCCccCCCeeecCCcchhhhcC-------C
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKA-EL----IFPGKKTRFFPGVMIAEEPQWRDCIQ-------G  116 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~----~~~~~~~~~~~~~d~~~~~~~~~~~~-------~  116 (355)
                      .+++|+||||+|++|++++++|++.|++|+++.|+.... ..    ............+|+.+.+++.++++       +
T Consensus         4 ~~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   83 (248)
T PRK05557          4 EGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGALGGKALAVQGDVSDAESVERAVDEAKAEFGG   83 (248)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            347899999999999999999999999998888876531 11    11111101133468888887766553       6


Q ss_pred             CcEEEECCCCCCC---CCCChhhHHHHHHHhhhhHHHHHHHHHcC--CCCCCcEEEEeeeeeeeeCCCCCccccCCCCCC
Q 018503          117 STAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSG  191 (355)
Q Consensus       117 ~d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~  191 (355)
                      +|+|||+++....   .....+.....+..|+.++.++++++...  ..+.++++++||.... ++.          +..
T Consensus        84 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~iss~~~~-~~~----------~~~  152 (248)
T PRK05557         84 VDILVNNAGITRDNLLMRMKEEDWDRVIDTNLTGVFNLTKAVARPMMKQRSGRIINISSVVGL-MGN----------PGQ  152 (248)
T ss_pred             CCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcccccC-cCC----------CCC
Confidence            8999999987432   22344566778889999999998887642  1355689999987441 442          123


Q ss_pred             Chh-HHHHHHHHHHHHhc---cCCCCeEEEEEecEEEeCCCCccc-chHHHHHHHhCCCCCCCCcceecccHHHHHHHHH
Q 018503          192 NDY-LAEVCREWEGTALK---VNKDVRLALIRIGIVLGKDGGALA-KMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIY  266 (355)
Q Consensus       192 ~~y-~~k~~~~~~~~~~~---~~~~~~~~i~Rp~~i~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~  266 (355)
                      ..| .+|...+.....+.   ...++++++++|+.+.++...... .+..  ......+      ...+.+.+|+|+++.
T Consensus       153 ~~y~~sk~a~~~~~~~~a~~~~~~~i~~~~v~pg~~~~~~~~~~~~~~~~--~~~~~~~------~~~~~~~~~va~~~~  224 (248)
T PRK05557        153 ANYAASKAGVIGFTKSLARELASRGITVNAVAPGFIETDMTDALPEDVKE--AILAQIP------LGRLGQPEEIASAVA  224 (248)
T ss_pred             chhHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCccCCccccccChHHHH--HHHhcCC------CCCCcCHHHHHHHHH
Confidence            446 55654443333222   134899999999988655322211 1111  1111111      123679999999999


Q ss_pred             HHHhCCC---CCCceEecCCC
Q 018503          267 EALSNPS---YRGVINGTAPN  284 (355)
Q Consensus       267 ~~~~~~~---~~~~~~i~~~~  284 (355)
                      .++....   .+..|++.++.
T Consensus       225 ~l~~~~~~~~~g~~~~i~~~~  245 (248)
T PRK05557        225 FLASDEAAYITGQTLHVNGGM  245 (248)
T ss_pred             HHcCcccCCccccEEEecCCc
Confidence            8886522   34588887663

>PRK06701 short chain dehydrogenase; Provisional

Probab=99.74  E-value=2.5e-16  Score=138.69  Aligned_cols=218  Identities=11%  Similarity=-0.001  Sum_probs=143.9

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchh-hcc----CCCCCCccCCCeeecCCcchhhhcC-------CC
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKA-ELI----FPGKKTRFFPGVMIAEEPQWRDCIQ-------GS  117 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~~----~~~~~~~~~~~~d~~~~~~~~~~~~-------~~  117 (355)
                      .|+||||||+|+||.+++++|+++|++|++++|+.... ...    ...........+|+.+.+.+.++++       ++
T Consensus        46 ~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~~~i  125 (290)
T PRK06701         46 GKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSDEAFCKDAVEETVRELGRL  125 (290)
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            47899999999999999999999999999999976431 111    1101111134578888887766553       58


Q ss_pred             cEEEECCCCCCC----CCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCCh
Q 018503          118 TAVVNLAGTPIG----TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGND  193 (355)
Q Consensus       118 d~vi~~a~~~~~----~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~~  193 (355)
                      |+|||+|+....    .....+.....+++|+.++.++++++...-....++|++||...  |...         +....
T Consensus       126 D~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~g~iV~isS~~~--~~~~---------~~~~~  194 (290)
T PRK06701        126 DILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQGSAIINTGSITG--YEGN---------ETLID  194 (290)
T ss_pred             CEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhhCCeEEEEecccc--cCCC---------CCcch
Confidence            999999996422    12334566788999999999999988652112358999999876  5322         12235


Q ss_pred             h-HHHHHHHHHHHHhccC---CCCeEEEEEecEEEeCCCCcccchHHHHHHHhCCCCCCCCcceecccHHHHHHHHHHHH
Q 018503          194 Y-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEAL  269 (355)
Q Consensus       194 y-~~k~~~~~~~~~~~~~---~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~  269 (355)
                      | .+|...+.+.+.+..+   .|++++.++||.++.+...... .........     .......+.+.+|+|++++.++
T Consensus       195 Y~~sK~a~~~l~~~la~~~~~~gIrv~~i~pG~v~T~~~~~~~-~~~~~~~~~-----~~~~~~~~~~~~dva~~~~~ll  268 (290)
T PRK06701        195 YSATKGAIHAFTRSLAQSLVQKGIRVNAVAPGPIWTPLIPSDF-DEEKVSQFG-----SNTPMQRPGQPEELAPAYVFLA  268 (290)
T ss_pred             hHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCCCCCccccccc-CHHHHHHHH-----hcCCcCCCcCHHHHHHHHHHHc
Confidence            6 6776666655555443   4899999999999887432110 001111111     1112235789999999999999


Q ss_pred             hCCC---CCCceEecCCC
Q 018503          270 SNPS---YRGVINGTAPN  284 (355)
Q Consensus       270 ~~~~---~~~~~~i~~~~  284 (355)
                      ....   .+..+++.++.
T Consensus       269 ~~~~~~~~G~~i~idgg~  286 (290)
T PRK06701        269 SPDSSYITGQMLHVNGGV  286 (290)
T ss_pred             CcccCCccCcEEEeCCCc
Confidence            8754   34477777664

>PRK10538 malonic semialdehyde reductase; Provisional

Probab=99.73  E-value=8.5e-17  Score=138.62  Aligned_cols=204  Identities=16%  Similarity=0.149  Sum_probs=134.0

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCC-CCCccCCCeeecCCcchhhhcC-------CCcEEEE
Q 018503           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-KKTRFFPGVMIAEEPQWRDCIQ-------GSTAVVN  122 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~-------~~d~vi~  122 (355)
                      |+|+||||+|++|.++++.|+++|++|++++|+++....+... ........+|+.|.+++.++++       ++|+|||
T Consensus         1 ~~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~vi~   80 (248)
T PRK10538          1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWRNIDVLVN   80 (248)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            6899999999999999999999999999999987654432111 0001134578888887766553       6899999


Q ss_pred             CCCCCCC----CCCChhhHHHHHHHhhhhHHHHHHHHHcC--CCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCChh-H
Q 018503          123 LAGTPIG----TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-L  195 (355)
Q Consensus       123 ~a~~~~~----~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~~y-~  195 (355)
                      +||....    .....+.....+++|+.++..+++++...  ..+.+++|++||...  +..         .+....| .
T Consensus        81 ~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~--~~~---------~~~~~~Y~~  149 (248)
T PRK10538         81 NAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAG--SWP---------YAGGNVYGA  149 (248)
T ss_pred             CCCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCccc--CCC---------CCCCchhHH
Confidence            9986421    22345667888999999966666554321  146678999999754  211         1223457 6


Q ss_pred             HHHHHHHHHHHhcc---CCCCeEEEEEecEEEeCCCCcc--cchHHHHHHHhCCCCCCCCcceecccHHHHHHHHHHHHh
Q 018503          196 AEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGAL--AKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALS  270 (355)
Q Consensus       196 ~k~~~~~~~~~~~~---~~~~~~~i~Rp~~i~G~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~  270 (355)
                      +|...+.+...+..   ..++.+.+++||.+.|+.....  .......    .... .   ...++..+|+|++++.++.
T Consensus       150 sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~i~~~~~~~~~~~~~~~~~----~~~~-~---~~~~~~~~dvA~~~~~l~~  221 (248)
T PRK10538        150 TKAFVRQFSLNLRTDLHGTAVRVTDIEPGLVGGTEFSNVRFKGDDGKA----EKTY-Q---NTVALTPEDVSEAVWWVAT  221 (248)
T ss_pred             HHHHHHHHHHHHHHHhcCCCcEEEEEeCCeecccccchhhccCcHHHH----Hhhc-c---ccCCCCHHHHHHHHHHHhc
Confidence            77666665554433   3489999999999986642110  0000000    0000 0   1235789999999999998


Q ss_pred             CCC
Q 018503          271 NPS  273 (355)
Q Consensus       271 ~~~  273 (355)
                      .+.
T Consensus       222 ~~~  224 (248)
T PRK10538        222 LPA  224 (248)
T ss_pred             CCC
Confidence            654

>KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism]

Probab=99.73  E-value=1.5e-16  Score=143.33  Aligned_cols=245  Identities=20%  Similarity=0.186  Sum_probs=162.0

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCC---CeEEEEecCCchhhcc---C------------CC---C-CCccCCCeeecC-
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADN---HQVRVLTRSRSKAELI---F------------PG---K-KTRFFPGVMIAE-  106 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g---~~V~~~~r~~~~~~~~---~------------~~---~-~~~~~~~~d~~~-  106 (355)
                      .++|+|||||||+|.-+++.|++.-   -+|+.+.|........   .            +.   . ........|+.+ 
T Consensus        12 ~k~i~vTG~tGFlgKVliEklLr~~p~v~~IYlLiR~k~g~~~~~Rl~~~~~~~lF~~l~~~~p~~l~Kv~pi~GDi~~~   91 (467)
T KOG1221|consen   12 NKTIFVTGATGFLGKVLIEKLLRTTPDVKRIYLLIRAKKGKAAQERLRTELKDPLFEVLKEKKPEALEKVVPIAGDISEP   91 (467)
T ss_pred             CCeEEEEcccchhHHHHHHHHHhcCcCcceEEEEEecCCCCCHHHHHHHHHhhhHHHHHHhhCccceecceeccccccCc
Confidence            4789999999999999999999852   4899999976543110   0            00   0 000122234443 


Q ss_pred             -----CcchhhhcCCCcEEEECCCCCCCCCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeC-CCC
Q 018503          107 -----EPQWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYG-TSE  180 (355)
Q Consensus       107 -----~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg-~~~  180 (355)
                           +.++..+.+.+|+|||+||..   .+.+ .......+|+.|+.++++.|+++ ...+-++++||+++...- .-.
T Consensus        92 ~LGis~~D~~~l~~eV~ivih~AAtv---rFde-~l~~al~iNt~Gt~~~l~lak~~-~~l~~~vhVSTAy~n~~~~~i~  166 (467)
T KOG1221|consen   92 DLGISESDLRTLADEVNIVIHSAATV---RFDE-PLDVALGINTRGTRNVLQLAKEM-VKLKALVHVSTAYSNCNVGHIE  166 (467)
T ss_pred             ccCCChHHHHHHHhcCCEEEEeeeee---ccch-hhhhhhhhhhHhHHHHHHHHHHh-hhhheEEEeehhheeccccccc
Confidence                 234555667899999999853   3333 33456679999999999999997 577889999999772100 000


Q ss_pred             CccccCCC-----------------------C-----CCChh-HHHHHHHHHHHHhccCCCCeEEEEEecEEEeCCCCcc
Q 018503          181 TEVFDESS-----------------------P-----SGNDY-LAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGAL  231 (355)
Q Consensus       181 ~~~~~e~~-----------------------~-----~~~~y-~~k~~~~~~~~~~~~~~~~~~~i~Rp~~i~G~~~~~~  231 (355)
                      +.++.+..                       +     ..+.| +.|...|.......  .+++.+|+||+.|......++
T Consensus       167 E~~y~~~~~~~~~~~i~~~~~~~~~~ld~~~~~l~~~~PNTYtfTKal~E~~i~~~~--~~lPivIiRPsiI~st~~EP~  244 (467)
T KOG1221|consen  167 EKPYPMPETCNPEKILKLDENLSDELLDQKAPKLLGGWPNTYTFTKALAEMVIQKEA--ENLPLVIIRPSIITSTYKEPF  244 (467)
T ss_pred             ccccCccccCCHHHHHhhhccchHHHHHHhhHHhcCCCCCceeehHhhHHHHHHhhc--cCCCeEEEcCCceeccccCCC
Confidence            11111100                       0     13446 77766666655444  589999999999998766555


Q ss_pred             cchHHHHHH--------HhCCC---CCCCCcceecccHHHHHHHHHHHHhC--CC----CCCceEecCCC--ccCHHHHH
Q 018503          232 AKMIPLFMM--------FAGGP---LGSGQQWFSWIHLDDIVNLIYEALSN--PS----YRGVINGTAPN--PVRLAEMC  292 (355)
Q Consensus       232 ~~~~~~~~~--------~~~~~---~~~~~~~~~~i~v~Dva~~~~~~~~~--~~----~~~~~~i~~~~--~~s~~el~  292 (355)
                      ..|+.....        ..|.-   ..+.+...|+|.++.++.+++.+.-+  ..    ...+||+++++  +++|.++.
T Consensus       245 pGWidn~~gp~g~i~g~gkGvlr~~~~d~~~~adiIPvD~vvN~~ia~~~~~~~~~~~~~~~IY~~tss~~Np~t~~~~~  324 (467)
T KOG1221|consen  245 PGWIDNLNGPDGVIIGYGKGVLRCFLVDPKAVADIIPVDMVVNAMIASAWQHAGNSKEKTPPIYHLTSSNDNPVTWGDFI  324 (467)
T ss_pred             CCccccCCCCceEEEEeccceEEEEEEccccccceeeHHHHHHHHHHHHHHHhccCCCCCCcEEEecccccCcccHHHHH
Confidence            555433321        11111   15677888999999999999977621  11    13499999864  89999999


Q ss_pred             HHHHHHhCC
Q 018503          293 DHLGNVLGR  301 (355)
Q Consensus       293 ~~i~~~~g~  301 (355)
                      +...+.+.+
T Consensus       325 e~~~~~~~~  333 (467)
T KOG1221|consen  325 ELALRYFEK  333 (467)
T ss_pred             HHHHHhccc
Confidence            999998864

>PRK05717 oxidoreductase; Validated

Probab=99.73  E-value=2.1e-16  Score=136.77  Aligned_cols=219  Identities=15%  Similarity=0.064  Sum_probs=141.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCC-CCCccCCCeeecCCcchhhhc-------CCCcEE
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-KKTRFFPGVMIAEEPQWRDCI-------QGSTAV  120 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~-------~~~d~v  120 (355)
                      ++++|+||||+|+||+++++.|+++|++|++++|+..+....... ........+|+.+.+++.+++       ..+|++
T Consensus         9 ~~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~l   88 (255)
T PRK05717          9 NGRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVAKALGENAWFIAMDVADEAQVAAGVAEVLGQFGRLDAL   88 (255)
T ss_pred             CCCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            357899999999999999999999999999999876543322111 000113457888887765544       257999


Q ss_pred             EECCCCCCCC-----CCChhhHHHHHHHhhhhHHHHHHHHHcC-CCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCChh
Q 018503          121 VNLAGTPIGT-----RWSSEIKKEIKESRIRVTSKVVDLINES-PEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY  194 (355)
Q Consensus       121 i~~a~~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~~y  194 (355)
                      ||+||.....     ....+.+...+++|+.++.++++++... .....++|++||.... ++.          +....|
T Consensus        89 i~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~ii~~sS~~~~-~~~----------~~~~~Y  157 (255)
T PRK05717         89 VCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAKHCAPYLRAHNGAIVNLASTRAR-QSE----------PDTEAY  157 (255)
T ss_pred             EECCCcccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCcEEEEEcchhhc-CCC----------CCCcch
Confidence            9999975221     2245667788999999999999998631 1233579999887651 221          123457


Q ss_pred             -HHHHHHHHHHHHhccCC--CCeEEEEEecEEEeCCCCcccchHHHHHHHhCCCCCCCCcceecccHHHHHHHHHHHHhC
Q 018503          195 -LAEVCREWEGTALKVNK--DVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSN  271 (355)
Q Consensus       195 -~~k~~~~~~~~~~~~~~--~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~  271 (355)
                       .+|...+.+...+..+.  ++++..++|+.+.++..... ...+.........     ....+.+.+|+|.++..++..
T Consensus       158 ~~sKaa~~~~~~~la~~~~~~i~v~~i~Pg~i~t~~~~~~-~~~~~~~~~~~~~-----~~~~~~~~~~va~~~~~l~~~  231 (255)
T PRK05717        158 AASKGGLLALTHALAISLGPEIRVNAVSPGWIDARDPSQR-RAEPLSEADHAQH-----PAGRVGTVEDVAAMVAWLLSR  231 (255)
T ss_pred             HHHHHHHHHHHHHHHHHhcCCCEEEEEecccCcCCccccc-cchHHHHHHhhcC-----CCCCCcCHHHHHHHHHHHcCc
Confidence             77876666655544432  58999999999988753211 0111111111111     012367899999999998865


Q ss_pred             CC---CCCceEecCCC
Q 018503          272 PS---YRGVINGTAPN  284 (355)
Q Consensus       272 ~~---~~~~~~i~~~~  284 (355)
                      ..   .+..+.+.++.
T Consensus       232 ~~~~~~g~~~~~~gg~  247 (255)
T PRK05717        232 QAGFVTGQEFVVDGGM  247 (255)
T ss_pred             hhcCccCcEEEECCCc
Confidence            43   23466665543

>PRK06101 short chain dehydrogenase; Provisional

Probab=99.73  E-value=1.1e-16  Score=137.16  Aligned_cols=195  Identities=15%  Similarity=0.142  Sum_probs=136.3

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcCC----CcEEEECCCC
Q 018503           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQG----STAVVNLAGT  126 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~----~d~vi~~a~~  126 (355)
                      ++++||||+|+||++++++|+++|++|++++|+++....+...........+|+.|.+++.+++++    +|.+||+||.
T Consensus         2 ~~vlItGas~giG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~d~~i~~ag~   81 (240)
T PRK06101          2 TAVLITGATSGIGKQLALDYAKQGWQVIACGRNQSVLDELHTQSANIFTLAFDVTDHPGTKAALSQLPFIPELWIFNAGD   81 (240)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhcCCCeEEEeeCCCHHHHHHHHHhcccCCCEEEEcCcc
Confidence            579999999999999999999999999999998765543322111112446899999988887753    6899999985


Q ss_pred             CCCC---CCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCChh-HHHHHHHH
Q 018503          127 PIGT---RWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-LAEVCREW  202 (355)
Q Consensus       127 ~~~~---~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~~y-~~k~~~~~  202 (355)
                      ....   ....+.....+++|+.++.++++++...-...+++|++||.... ++          .+....| .+|...+.
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~isS~~~~-~~----------~~~~~~Y~asK~a~~~  150 (240)
T PRK06101         82 CEYMDDGKVDATLMARVFNVNVLGVANCIEGIQPHLSCGHRVVIVGSIASE-LA----------LPRAEAYGASKAAVAY  150 (240)
T ss_pred             cccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCeEEEEechhhc-cC----------CCCCchhhHHHHHHHH
Confidence            3211   13445567889999999999999887521123578888886431 22          1223457 77776666


Q ss_pred             HHHHhc---cCCCCeEEEEEecEEEeCCCCcccchHHHHHHHhCCCCCCCCcceecccHHHHHHHHHHHHhCCC
Q 018503          203 EGTALK---VNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPS  273 (355)
Q Consensus       203 ~~~~~~---~~~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~  273 (355)
                      +.+.+.   ...|+++++++|+.++++......             ...    ...+..+|+|+.++..++.+.
T Consensus       151 ~~~~l~~e~~~~gi~v~~v~pg~i~t~~~~~~~-------------~~~----~~~~~~~~~a~~i~~~i~~~~  207 (240)
T PRK06101        151 FARTLQLDLRPKGIEVVTVFPGFVATPLTDKNT-------------FAM----PMIITVEQASQEIRAQLARGK  207 (240)
T ss_pred             HHHHHHHHHHhcCceEEEEeCCcCCCCCcCCCC-------------CCC----CcccCHHHHHHHHHHHHhcCC
Confidence            655443   235899999999999887432110             000    114789999999999998753

>PRK09134 short chain dehydrogenase; Provisional

Probab=99.73  E-value=2.5e-16  Score=136.55  Aligned_cols=221  Identities=18%  Similarity=0.140  Sum_probs=142.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCc-hhhccC----CCCCCccCCCeeecCCcchhhhcC-------C
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRS-KAELIF----PGKKTRFFPGVMIAEEPQWRDCIQ-------G  116 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~-~~~~~~----~~~~~~~~~~~d~~~~~~~~~~~~-------~  116 (355)
                      ++|++|||||+|+||++++++|++.|++|+++.+... ......    ..........+|+.|.+++.++++       .
T Consensus         8 ~~k~vlItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~   87 (258)
T PRK09134          8 APRAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIRALGRRAVALQADLADEAEVRALVARASAALGP   87 (258)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            4578999999999999999999999999988877542 221110    001001133468888887776653       4


Q ss_pred             CcEEEECCCCCCC---CCCChhhHHHHHHHhhhhHHHHHHHHHcC--CCCCCcEEEEeeeeeeeeCCCCCccccCCCCCC
Q 018503          117 STAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSG  191 (355)
Q Consensus       117 ~d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~  191 (355)
                      +|+|||+||....   .....+.....+++|+.++..+++++...  ....+++|+++|...  +..         .+..
T Consensus        88 iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~~s~~~--~~~---------~p~~  156 (258)
T PRK09134         88 ITLLVNNASLFEYDSAASFTRASWDRHMATNLRAPFVLAQAFARALPADARGLVVNMIDQRV--WNL---------NPDF  156 (258)
T ss_pred             CCEEEECCcCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECchhh--cCC---------CCCc
Confidence            7999999986422   23345667788999999999998877552  123456777776544  321         1222


Q ss_pred             Chh-HHHHHHHHHHHHhccCC--CCeEEEEEecEEEeCCCCcccchHHHHHHHhCCCCCCCCcceecccHHHHHHHHHHH
Q 018503          192 NDY-LAEVCREWEGTALKVNK--DVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEA  268 (355)
Q Consensus       192 ~~y-~~k~~~~~~~~~~~~~~--~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~  268 (355)
                      ..| .+|...+.+.+.+..+.  ++.++.++||.+..........+.   ......+.+      ...+++|+|++++.+
T Consensus       157 ~~Y~~sK~a~~~~~~~la~~~~~~i~v~~i~PG~v~t~~~~~~~~~~---~~~~~~~~~------~~~~~~d~a~~~~~~  227 (258)
T PRK09134        157 LSYTLSKAALWTATRTLAQALAPRIRVNAIGPGPTLPSGRQSPEDFA---RQHAATPLG------RGSTPEEIAAAVRYL  227 (258)
T ss_pred             hHHHHHHHHHHHHHHHHHHHhcCCcEEEEeecccccCCcccChHHHH---HHHhcCCCC------CCcCHHHHHHHHHHH
Confidence            357 77876666665554432  489999999988754321111111   111111211      247799999999999


Q ss_pred             HhCCCC-CCceEecCCCccCHH
Q 018503          269 LSNPSY-RGVINGTAPNPVRLA  289 (355)
Q Consensus       269 ~~~~~~-~~~~~i~~~~~~s~~  289 (355)
                      ++.+.. +..|++.++..++|.
T Consensus       228 ~~~~~~~g~~~~i~gg~~~~~~  249 (258)
T PRK09134        228 LDAPSVTGQMIAVDGGQHLAWL  249 (258)
T ss_pred             hcCCCcCCCEEEECCCeecccc
Confidence            987654 447888777655543

>PRK06841 short chain dehydrogenase; Provisional

Probab=99.73  E-value=3.1e-16  Score=135.76  Aligned_cols=218  Identities=14%  Similarity=0.008  Sum_probs=142.3

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCC-CCCccCCCeeecCCcchhhhcC-------CCcEEE
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-KKTRFFPGVMIAEEPQWRDCIQ-------GSTAVV  121 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~-------~~d~vi  121 (355)
                      .++||||||+|+||+++++.|+++|++|++++|+.......... ........+|+.+.+++.++++       ++|+||
T Consensus        15 ~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~vi   94 (255)
T PRK06841         15 GKVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDVAEVAAQLLGGNAKGLVCDVSDSQSVEAAVAAVISAFGRIDILV   94 (255)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEEE
Confidence            47899999999999999999999999999999986532211110 0000133478888887766553       579999


Q ss_pred             ECCCCCCCC---CCChhhHHHHHHHhhhhHHHHHHHHHcC--CCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCChh-H
Q 018503          122 NLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-L  195 (355)
Q Consensus       122 ~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~~y-~  195 (355)
                      |++|.....   ....+.....+++|+.++.++++++...  ..+.+++|++||.... ++.          +....| .
T Consensus        95 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~-~~~----------~~~~~Y~~  163 (255)
T PRK06841         95 NSAGVALLAPAEDVSEEDWDKTIDINLKGSFLMAQAVGRHMIAAGGGKIVNLASQAGV-VAL----------ERHVAYCA  163 (255)
T ss_pred             ECCCCCCCCChhhCCHHHHHHHHHHhcHHHHHHHHHHHHHHHhcCCceEEEEcchhhc-cCC----------CCCchHHH
Confidence            999974321   2234556778899999999999887541  1356789999997541 331          123457 6


Q ss_pred             HHHHHHHHHHHhccC---CCCeEEEEEecEEEeCCCCcccchHHHHHHHhCCCCCCCCcceecccHHHHHHHHHHHHhCC
Q 018503          196 AEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNP  272 (355)
Q Consensus       196 ~k~~~~~~~~~~~~~---~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~  272 (355)
                      +|...+.+.+.+..+   .|+++..++|+.+..+.......-..........+      ...+.+.+|+|++++.++..+
T Consensus       164 sK~a~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~va~~~~~l~~~~  237 (255)
T PRK06841        164 SKAGVVGMTKVLALEWGPYGITVNAISPTVVLTELGKKAWAGEKGERAKKLIP------AGRFAYPEEIAAAALFLASDA  237 (255)
T ss_pred             HHHHHHHHHHHHHHHHHhhCeEEEEEEeCcCcCcccccccchhHHHHHHhcCC------CCCCcCHHHHHHHHHHHcCcc
Confidence            776655555444332   48999999999987764221100000011111111      234789999999999999865


Q ss_pred             C---CCCceEecCCC
Q 018503          273 S---YRGVINGTAPN  284 (355)
Q Consensus       273 ~---~~~~~~i~~~~  284 (355)
                      .   .+.++.+.+|.
T Consensus       238 ~~~~~G~~i~~dgg~  252 (255)
T PRK06841        238 AAMITGENLVIDGGY  252 (255)
T ss_pred             ccCccCCEEEECCCc
Confidence            4   34466666654

>PRK07024 short chain dehydrogenase; Provisional

Probab=99.73  E-value=1e-16  Score=138.90  Aligned_cols=194  Identities=14%  Similarity=0.106  Sum_probs=134.8

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCC---CccCCCeeecCCcchhhhcC-------CCcE
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKK---TRFFPGVMIAEEPQWRDCIQ-------GSTA  119 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~---~~~~~~~d~~~~~~~~~~~~-------~~d~  119 (355)
                      +|+|+||||+|+||+++++.|+++|++|++++|+.+..........   ......+|+.|++++.++++       .+|+
T Consensus         2 ~~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g~id~   81 (257)
T PRK07024          2 PLKVFITGASSGIGQALAREYARQGATLGLVARRTDALQAFAARLPKAARVSVYAADVRDADALAAAAADFIAAHGLPDV   81 (257)
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcccCCeeEEEEcCCCCHHHHHHHHHHHHHhCCCCCE
Confidence            4789999999999999999999999999999998765433211100   11244578888888876653       3799


Q ss_pred             EEECCCCCCCCC----CChhhHHHHHHHhhhhHHHHHHH----HHcCCCCCCcEEEEeeeeeeeeCCCCCccccCCCCCC
Q 018503          120 VVNLAGTPIGTR----WSSEIKKEIKESRIRVTSKVVDL----INESPEGVRPSVLVSATALGYYGTSETEVFDESSPSG  191 (355)
Q Consensus       120 vi~~a~~~~~~~----~~~~~~~~~~~~n~~~~~~l~~a----~~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~  191 (355)
                      +||+||......    ...+.....+++|+.++..++++    +++  .+.+++|++||.... ++          .+..
T Consensus        82 lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~l~~~~~--~~~~~iv~isS~~~~-~~----------~~~~  148 (257)
T PRK07024         82 VIANAGISVGTLTEEREDLAVFREVMDTNYFGMVATFQPFIAPMRA--ARRGTLVGIASVAGV-RG----------LPGA  148 (257)
T ss_pred             EEECCCcCCCccccccCCHHHHHHHHhHhcHHHHHHHHHHHHHHHh--cCCCEEEEEechhhc-CC----------CCCC
Confidence            999999743211    23466788899999999887764    444  456789999987651 22          1223


Q ss_pred             Chh-HHHHHHHHHHHHhc---cCCCCeEEEEEecEEEeCCCCcccchHHHHHHHhCCCCCCCCcceecccHHHHHHHHHH
Q 018503          192 NDY-LAEVCREWEGTALK---VNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYE  267 (355)
Q Consensus       192 ~~y-~~k~~~~~~~~~~~---~~~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~  267 (355)
                      ..| .+|...+...+.+.   ...++++++++|+.+.++.....             ....    -.++..+|+|+.++.
T Consensus       149 ~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~-------------~~~~----~~~~~~~~~a~~~~~  211 (257)
T PRK07024        149 GAYSASKAAAIKYLESLRVELRPAGVRVVTIAPGYIRTPMTAHN-------------PYPM----PFLMDADRFAARAAR  211 (257)
T ss_pred             cchHHHHHHHHHHHHHHHHHhhccCcEEEEEecCCCcCchhhcC-------------CCCC----CCccCHHHHHHHHHH
Confidence            457 77777666655443   34589999999999987632110             0000    013679999999999


Q ss_pred             HHhCCC
Q 018503          268 ALSNPS  273 (355)
Q Consensus       268 ~~~~~~  273 (355)
                      ++.++.
T Consensus       212 ~l~~~~  217 (257)
T PRK07024        212 AIARGR  217 (257)
T ss_pred             HHhCCC
Confidence            998653

>PRK08628 short chain dehydrogenase; Provisional

Probab=99.73  E-value=5.7e-17  Score=140.59  Aligned_cols=225  Identities=19%  Similarity=0.115  Sum_probs=145.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhcc---CCCCCCccCCCeeecCCcchhhhcC-------CCc
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELI---FPGKKTRFFPGVMIAEEPQWRDCIQ-------GST  118 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~---~~~~~~~~~~~~d~~~~~~~~~~~~-------~~d  118 (355)
                      +.++||||||+|.||++++++|+++|++|++++|+.+.....   ...........+|+.+++++.++++       ++|
T Consensus         6 ~~~~ilItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   85 (258)
T PRK08628          6 KDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDDEFAEELRALQPRAEFVQVDLTDDAQCRDAVEQTVAKFGRID   85 (258)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCChhhHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcCCCC
Confidence            346899999999999999999999999999999987653111   0001111134578888887776664       589


Q ss_pred             EEEECCCCCCC--CCCChhhHHHHHHHhhhhHHHHHHHHHcC-CCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCChh-
Q 018503          119 AVVNLAGTPIG--TRWSSEIKKEIKESRIRVTSKVVDLINES-PEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-  194 (355)
Q Consensus       119 ~vi~~a~~~~~--~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~~y-  194 (355)
                      +|||+||....  .....+.....++.|+.++..+.+++... ....++++++||.... ++          .+....| 
T Consensus        86 ~vi~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~-~~----------~~~~~~Y~  154 (258)
T PRK08628         86 GLVNNAGVNDGVGLEAGREAFVASLERNLIHYYVMAHYCLPHLKASRGAIVNISSKTAL-TG----------QGGTSGYA  154 (258)
T ss_pred             EEEECCcccCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhhccCcEEEEECCHHhc-cC----------CCCCchhH
Confidence            99999996322  12223566788899999998888876531 1234689999987651 22          1234567 


Q ss_pred             HHHHHHHHHHHHhcc---CCCCeEEEEEecEEEeCCCCccc-ch---HHHH-HHHhCCCCCCCCcceecccHHHHHHHHH
Q 018503          195 LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALA-KM---IPLF-MMFAGGPLGSGQQWFSWIHLDDIVNLIY  266 (355)
Q Consensus       195 ~~k~~~~~~~~~~~~---~~~~~~~i~Rp~~i~G~~~~~~~-~~---~~~~-~~~~~~~~~~~~~~~~~i~v~Dva~~~~  266 (355)
                      .+|...+.+...+..   ..+++++.++||.++++....+. .+   .... ......+.  +   ..++..+|+|++++
T Consensus       155 ~sK~a~~~~~~~l~~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~--~---~~~~~~~dva~~~~  229 (258)
T PRK08628        155 AAKGAQLALTREWAVALAKDGVRVNAVIPAEVMTPLYENWIATFDDPEAKLAAITAKIPL--G---HRMTTAEEIADTAV  229 (258)
T ss_pred             HHHHHHHHHHHHHHHHHhhcCeEEEEEecCccCCHHHHHHhhhccCHHHHHHHHHhcCCc--c---ccCCCHHHHHHHHH
Confidence            777776666665543   35899999999999987421110 00   0000 11111111  1   14688999999999


Q ss_pred             HHHhCCC---CCCceEecCCCccCHHH
Q 018503          267 EALSNPS---YRGVINGTAPNPVRLAE  290 (355)
Q Consensus       267 ~~~~~~~---~~~~~~i~~~~~~s~~e  290 (355)
                      .++....   .+..+.+.++. ..+++
T Consensus       230 ~l~~~~~~~~~g~~~~~~gg~-~~~~~  255 (258)
T PRK08628        230 FLLSERSSHTTGQWLFVDGGY-VHLDR  255 (258)
T ss_pred             HHhChhhccccCceEEecCCc-ccccc
Confidence            9997653   23366665553 44443

>PRK06500 short chain dehydrogenase; Provisional

Probab=99.73  E-value=2.7e-16  Score=135.57  Aligned_cols=208  Identities=15%  Similarity=0.107  Sum_probs=135.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCC-CCCccCCCeeecCCcchhhhc-------CCCcEE
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-KKTRFFPGVMIAEEPQWRDCI-------QGSTAV  120 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~-------~~~d~v  120 (355)
                      ++++|+||||+|+||++++++|+++|++|++++|+.+........ ........+|+.|.+++.+++       .++|+|
T Consensus         5 ~~k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v   84 (249)
T PRK06500          5 QGKTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAELGESALVIRADAGDVAAQKALAQALAEAFGRLDAV   84 (249)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            346999999999999999999999999999999986543322111 100113346777776654433       368999


Q ss_pred             EECCCCCCC---CCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCChh-HH
Q 018503          121 VNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-LA  196 (355)
Q Consensus       121 i~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~~y-~~  196 (355)
                      ||+||....   ..+..+.+...+++|+.++.++++++...-....++|++||.... |+.          +....| .+
T Consensus        85 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~i~~~S~~~~-~~~----------~~~~~Y~~s  153 (249)
T PRK06500         85 FINAGVAKFAPLEDWDEAMFDRSFNTNVKGPYFLIQALLPLLANPASIVLNGSINAH-IGM----------PNSSVYAAS  153 (249)
T ss_pred             EECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEechHhc-cCC----------CCccHHHHH
Confidence            999997432   234567778899999999999999987420123467777775431 442          224567 77


Q ss_pred             HHHHHHHHHHhcc---CCCCeEEEEEecEEEeCCCCc---ccchHHHH--HHHhCCCCCCCCcceecccHHHHHHHHHHH
Q 018503          197 EVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGA---LAKMIPLF--MMFAGGPLGSGQQWFSWIHLDDIVNLIYEA  268 (355)
Q Consensus       197 k~~~~~~~~~~~~---~~~~~~~i~Rp~~i~G~~~~~---~~~~~~~~--~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~  268 (355)
                      |...+.+...+..   ..++++++++|+.++++....   .......+  ......++      .-+...+|+|+++..+
T Consensus       154 K~a~~~~~~~la~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~va~~~~~l  227 (249)
T PRK06500        154 KAALLSLAKTLSGELLPRGIRVNAVSPGPVQTPLYGKLGLPEATLDAVAAQIQALVPL------GRFGTPEEIAKAVLYL  227 (249)
T ss_pred             HHHHHHHHHHHHHHhhhcCeEEEEEeeCcCCCHHHHhhccCccchHHHHHHHHhcCCC------CCCcCHHHHHHHHHHH
Confidence            7776666654433   248999999999999874211   00111111  11112222      1246889999999999


Q ss_pred             HhCCC
Q 018503          269 LSNPS  273 (355)
Q Consensus       269 ~~~~~  273 (355)
                      +..+.
T Consensus       228 ~~~~~  232 (249)
T PRK06500        228 ASDES  232 (249)
T ss_pred             cCccc
Confidence            87543

>KOG2774 consensus NAD dependent epimerase [General function prediction only]

Probab=99.73  E-value=1.2e-16  Score=128.38  Aligned_cols=284  Identities=13%  Similarity=0.123  Sum_probs=189.8

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhC-CCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhc--CCCcEEEECCCC
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQAD-NHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCI--QGSTAVVNLAGT  126 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~--~~~d~vi~~a~~  126 (355)
                      ..+|||||+-|++|..++..|... |-+-+.++.-..........+.   +.-.|+.|...+.+++  +.+|.+||..+.
T Consensus        44 ~PrvLITG~LGQLG~~~A~LLR~~yGs~~VILSDI~KPp~~V~~~GP---yIy~DILD~K~L~eIVVn~RIdWL~HfSAL  120 (366)
T KOG2774|consen   44 APRVLITGSLGQLGRGLASLLRYMYGSECVILSDIVKPPANVTDVGP---YIYLDILDQKSLEEIVVNKRIDWLVHFSAL  120 (366)
T ss_pred             CCeEEEecchHHHhHHHHHHHHHHhCCccEehhhccCCchhhcccCC---chhhhhhccccHHHhhcccccceeeeHHHH
Confidence            358999999999999999998876 6544444433333333333333   5667999999999988  468999998765


Q ss_pred             CCCCCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCCCCccccCC---CCCCChh-HHHHHHHH
Q 018503          127 PIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDES---SPSGNDY-LAEVCREW  202 (355)
Q Consensus       127 ~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~---~~~~~~y-~~k~~~~~  202 (355)
                      .  +...+.+-....++|+.|..|+++.+++  .+. ++..-|+.++  ||......-+.+   ..+..-| .+|..+|.
T Consensus       121 L--SAvGE~NVpLA~~VNI~GvHNil~vAa~--~kL-~iFVPSTIGA--FGPtSPRNPTPdltIQRPRTIYGVSKVHAEL  193 (366)
T KOG2774|consen  121 L--SAVGETNVPLALQVNIRGVHNILQVAAK--HKL-KVFVPSTIGA--FGPTSPRNPTPDLTIQRPRTIYGVSKVHAEL  193 (366)
T ss_pred             H--HHhcccCCceeeeecchhhhHHHHHHHH--cCe-eEeecccccc--cCCCCCCCCCCCeeeecCceeechhHHHHHH
Confidence            2  2233333445668999999999999999  455 4555677777  885433222222   1245568 99999999


Q ss_pred             HHHHhccCCCCeEEEEEecEEEeC---CCCcccchHHHH--HHHhCCCC--CCCCcceecccHHHHHHHHHHHHhCCC--
Q 018503          203 EGTALKVNKDVRLALIRIGIVLGK---DGGALAKMIPLF--MMFAGGPL--GSGQQWFSWIHLDDIVNLIYEALSNPS--  273 (355)
Q Consensus       203 ~~~~~~~~~~~~~~i~Rp~~i~G~---~~~~~~~~~~~~--~~~~~~~~--~~~~~~~~~i~v~Dva~~~~~~~~~~~--  273 (355)
                      +-+.+..++|+.+-.+|++.++..   +++........+  ...+|+-.  -.++....+.|.+|+-++++.++..+.  
T Consensus       194 ~GEy~~hrFg~dfr~~rfPg~is~~~pgggttdya~A~f~~Al~~gk~tCylrpdtrlpmmy~~dc~~~~~~~~~a~~~~  273 (366)
T KOG2774|consen  194 LGEYFNHRFGVDFRSMRFPGIISATKPGGGTTDYAIAIFYDALQKGKHTCYLRPDTRLPMMYDTDCMASVIQLLAADSQS  273 (366)
T ss_pred             HHHHHHhhcCccceecccCcccccCCCCCCcchhHHHHHHHHHHcCCcccccCCCccCceeehHHHHHHHHHHHhCCHHH
Confidence            999999999999999998888753   333322233333  33344432  467788899999999999999998765  


Q ss_pred             -CCCceEecCCCccCHHHHHHHHHHHhCCCCCCCCcHHHHHHHhcccceeeecCccccchhH-HhCCCCCCccCHHHHHH
Q 018503          274 -YRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARA-KELGFPFKYRYVKDALK  351 (355)
Q Consensus       274 -~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~-~~lG~~p~~~~~~~~l~  351 (355)
                       ...+||+.+ -..+-.|+++.+.+.+..= .+.+....-.. ..+     ...+.++++.+ ++..|+-++. +...+.
T Consensus       274 lkrr~ynvt~-~sftpee~~~~~~~~~p~~-~i~y~~~srq~-iad-----~wp~~~dds~ar~~wh~~h~~~-l~~~i~  344 (366)
T KOG2774|consen  274 LKRRTYNVTG-FSFTPEEIADAIRRVMPGF-EIDYDICTRQS-IAD-----SWPMSLDDSEARTEWHEKHSLH-LLSIIS  344 (366)
T ss_pred             hhhheeeece-eccCHHHHHHHHHhhCCCc-eeecccchhhh-hhh-----hcccccCchhHhhHHHHhhhhh-HHHHHH
Confidence             345999976 5589999999999987421 01111111111 111     12334444445 5688888885 665554


Q ss_pred             H
Q 018503          352 A  352 (355)
Q Consensus       352 ~  352 (355)
                      -
T Consensus       345 ~  345 (366)
T KOG2774|consen  345 T  345 (366)
T ss_pred             H
Confidence            3

>PRK06523 short chain dehydrogenase; Provisional

Probab=99.72  E-value=8.1e-16  Score=133.53  Aligned_cols=218  Identities=17%  Similarity=0.104  Sum_probs=142.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhc-------CCCcEEE
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCI-------QGSTAVV  121 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~-------~~~d~vi  121 (355)
                      +.++|+||||+|.||++++++|.++|++|++++|+......  ...   ....+|+.|.+++.+++       .++|+||
T Consensus         8 ~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~--~~~---~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi   82 (260)
T PRK06523          8 AGKRALVTGGTKGIGAATVARLLEAGARVVTTARSRPDDLP--EGV---EFVAADLTTAEGCAAVARAVLERLGGVDILV   82 (260)
T ss_pred             CCCEEEEECCCCchhHHHHHHHHHCCCEEEEEeCChhhhcC--Cce---eEEecCCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            45799999999999999999999999999999998654221  111   14457888888766544       3689999


Q ss_pred             ECCCCCCC-----CCCChhhHHHHHHHhhhhHHHHHHHHHcC--CCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCChh
Q 018503          122 NLAGTPIG-----TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY  194 (355)
Q Consensus       122 ~~a~~~~~-----~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~~y  194 (355)
                      |+||....     .....+.+...+++|+.++..+.+++...  +.+.+++|++||...  +...        ......|
T Consensus        83 ~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~--~~~~--------~~~~~~Y  152 (260)
T PRK06523         83 HVLGGSSAPAGGFAALTDEEWQDELNLNLLAAVRLDRALLPGMIARGSGVIIHVTSIQR--RLPL--------PESTTAY  152 (260)
T ss_pred             ECCcccccCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEecccc--cCCC--------CCCcchh
Confidence            99985321     12345667788999999987776654321  134568999998765  3210        0123457


Q ss_pred             -HHHHHHHHHHHHhccC---CCCeEEEEEecEEEeCCCCcc-cchH-------HHH-----HHHhCCCCCCCCcceeccc
Q 018503          195 -LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGAL-AKMI-------PLF-----MMFAGGPLGSGQQWFSWIH  257 (355)
Q Consensus       195 -~~k~~~~~~~~~~~~~---~~~~~~i~Rp~~i~G~~~~~~-~~~~-------~~~-----~~~~~~~~~~~~~~~~~i~  257 (355)
                       .+|...+.+.+.+..+   .|+++.+++||.+.++..... ..+.       ...     ....+.++      ..+..
T Consensus       153 ~~sK~a~~~l~~~~a~~~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~------~~~~~  226 (260)
T PRK06523        153 AAAKAALSTYSKSLSKEVAPKGVRVNTVSPGWIETEAAVALAERLAEAAGTDYEGAKQIIMDSLGGIPL------GRPAE  226 (260)
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccHHHHHHHHHhhcCCCHHHHHHHHHHHhccCcc------CCCCC
Confidence             7776666555544432   489999999999988753211 0000       000     00111111      23567


Q ss_pred             HHHHHHHHHHHHhCCC---CCCceEecCCCccC
Q 018503          258 LDDIVNLIYEALSNPS---YRGVINGTAPNPVR  287 (355)
Q Consensus       258 v~Dva~~~~~~~~~~~---~~~~~~i~~~~~~s  287 (355)
                      .+|+|+++..++....   .+..+.+.+|...+
T Consensus       227 ~~~va~~~~~l~s~~~~~~~G~~~~vdgg~~~~  259 (260)
T PRK06523        227 PEEVAELIAFLASDRAASITGTEYVIDGGTVPT  259 (260)
T ss_pred             HHHHHHHHHHHhCcccccccCceEEecCCccCC
Confidence            8999999999997543   34578787776443

>PRK09291 short chain dehydrogenase; Provisional

Probab=99.72  E-value=1.8e-16  Score=137.38  Aligned_cols=210  Identities=14%  Similarity=0.104  Sum_probs=131.4

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCC----CCCCccCCCeeecCCcchhhhcC-CCcEEEECC
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP----GKKTRFFPGVMIAEEPQWRDCIQ-GSTAVVNLA  124 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~~d~~~~~~~~~~~~-~~d~vi~~a  124 (355)
                      +++||||||+|+||++++++|++.|++|++++|+......+..    .........+|+.|++++.+++. ++|+|||+|
T Consensus         2 ~~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~id~vi~~a   81 (257)
T PRK09291          2 SKTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAEAARRGLALRVEKLDLTDAIDRAQAAEWDVDVLLNNA   81 (257)
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeCCCHHHHHHHhcCCCCEEEECC
Confidence            4689999999999999999999999999999998654332211    00001134578889988888776 899999999


Q ss_pred             CCCCC---CCCChhhHHHHHHHhhhhHHHHHHHH----HcCCCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCChh-HH
Q 018503          125 GTPIG---TRWSSEIKKEIKESRIRVTSKVVDLI----NESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-LA  196 (355)
Q Consensus       125 ~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~----~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~~y-~~  196 (355)
                      |....   .....+.....+++|+.++..+.+++    .+  .+.+++|++||...  +..         .+....| .+
T Consensus        82 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~~~~~iv~~SS~~~--~~~---------~~~~~~Y~~s  148 (257)
T PRK09291         82 GIGEAGAVVDIPVELVRELFETNVFGPLELTQGFVRKMVA--RGKGKVVFTSSMAG--LIT---------GPFTGAYCAS  148 (257)
T ss_pred             CcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh--cCCceEEEEcChhh--ccC---------CCCcchhHHH
Confidence            97432   22344556678889998877665543    34  45679999998654  211         1223456 66


Q ss_pred             HHHHHHHHHHhcc---CCCCeEEEEEecEEEeCCCCccc-chHHHHHHHhC-CCCCCCCcceecccHHHHHHHHHHHHhC
Q 018503          197 EVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALA-KMIPLFMMFAG-GPLGSGQQWFSWIHLDDIVNLIYEALSN  271 (355)
Q Consensus       197 k~~~~~~~~~~~~---~~~~~~~i~Rp~~i~G~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~i~v~Dva~~~~~~~~~  271 (355)
                      |...+...+.+..   ..|++++++||+.+..+...... .+......... ............+..+|+++.++.++..
T Consensus       149 K~a~~~~~~~l~~~~~~~gi~~~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  228 (257)
T PRK09291        149 KHALEAIAEAMHAELKPFGIQVATVNPGPYLTGFNDTMAETPKRWYDPARNFTDPEDLAFPLEQFDPQEMIDAMVEVIPA  228 (257)
T ss_pred             HHHHHHHHHHHHHHHHhcCcEEEEEecCcccccchhhhhhhhhhhcchhhHHHhhhhhhccccCCCHHHHHHHHHHHhcC
Confidence            7666655444332   35899999999987543211100 01100000000 0001112233457888888888888765


Q ss_pred             C
Q 018503          272 P  272 (355)
Q Consensus       272 ~  272 (355)
                      +
T Consensus       229 ~  229 (257)
T PRK09291        229 D  229 (257)
T ss_pred             C
Confidence            4

>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.72  E-value=1.2e-15  Score=133.46  Aligned_cols=222  Identities=25%  Similarity=0.294  Sum_probs=150.1

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcCCCcEEEECCCCCCCC
Q 018503           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTPIGT  130 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~~~~~  130 (355)
                      |+||||||||++|++++++|+++||+|+++.|+++.........   .....|+.+.+.+...+++.|.++++.+... .
T Consensus         1 ~~ilV~GatG~~G~~~~~~L~~~~~~v~~~~r~~~~~~~~~~~v---~~~~~d~~~~~~l~~a~~G~~~~~~i~~~~~-~   76 (275)
T COG0702           1 MKILVTGATGFVGGAVVRELLARGHEVRAAVRNPEAAAALAGGV---EVVLGDLRDPKSLVAGAKGVDGVLLISGLLD-G   76 (275)
T ss_pred             CeEEEEecccchHHHHHHHHHhCCCEEEEEEeCHHHHHhhcCCc---EEEEeccCCHhHHHHHhccccEEEEEecccc-c
Confidence            57999999999999999999999999999999998877666211   1445688899999999999999999987531 1


Q ss_pred             CCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCChhHHHHHHHHHHHHhccC
Q 018503          131 RWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDYLAEVCREWEGTALKVN  210 (355)
Q Consensus       131 ~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~~y~~k~~~~~~~~~~~~~  210 (355)
                        ..    ........   .+++.+++...+.++++++|....     ..        ..... +.+.+...+...  ..
T Consensus        77 --~~----~~~~~~~~---~~~~~a~~a~~~~~~~~~~s~~~~-----~~--------~~~~~-~~~~~~~~e~~l--~~  131 (275)
T COG0702          77 --SD----AFRAVQVT---AVVRAAEAAGAGVKHGVSLSVLGA-----DA--------ASPSA-LARAKAAVEAAL--RS  131 (275)
T ss_pred             --cc----chhHHHHH---HHHHHHHHhcCCceEEEEeccCCC-----CC--------CCccH-HHHHHHHHHHHH--Hh
Confidence              11    11112222   233444442124667777776443     10        01112 233223333332  23


Q ss_pred             CCCeEEEEEecEEEeCCCCcccchHHHHHHHhCCCC-CCCCcceecccHHHHHHHHHHHHhCCC-CCCceEecCCCccCH
Q 018503          211 KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPL-GSGQQWFSWIHLDDIVNLIYEALSNPS-YRGVINGTAPNPVRL  288 (355)
Q Consensus       211 ~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~v~Dva~~~~~~~~~~~-~~~~~~i~~~~~~s~  288 (355)
                      .|++++++|+..+|.......    .......+.+. ..+.....++..+|++.++...+..+. .+.+|.+.+++..+.
T Consensus       132 sg~~~t~lr~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~i~~~d~a~~~~~~l~~~~~~~~~~~l~g~~~~~~  207 (275)
T COG0702         132 SGIPYTTLRRAAFYLGAGAAF----IEAAEAAGLPVIPRGIGRLSPIAVDDVAEALAAALDAPATAGRTYELAGPEALTL  207 (275)
T ss_pred             cCCCeEEEecCeeeeccchhH----HHHHHhhCCceecCCCCceeeeEHHHHHHHHHHHhcCCcccCcEEEccCCceecH
Confidence            699999999777776543221    11122233332 223336889999999999999998775 456999999989999


Q ss_pred             HHHHHHHHHHhCCCCCC
Q 018503          289 AEMCDHLGNVLGRPSWL  305 (355)
Q Consensus       289 ~el~~~i~~~~g~~~~~  305 (355)
                      .++.+.+.+..|++..+
T Consensus       208 ~~~~~~l~~~~gr~~~~  224 (275)
T COG0702         208 AELASGLDYTIGRPVGL  224 (275)
T ss_pred             HHHHHHHHHHhCCccee
Confidence            99999999999998433

>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.72  E-value=2.9e-16  Score=134.53  Aligned_cols=198  Identities=15%  Similarity=0.097  Sum_probs=134.1

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCC----CCCCccCCCeeecCCcchhhhcC-------CCc
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP----GKKTRFFPGVMIAEEPQWRDCIQ-------GST  118 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~~d~~~~~~~~~~~~-------~~d  118 (355)
                      .++++||||+|+||.+++++|+++|++|++++|+.........    .........+|+.+++++.++++       ++|
T Consensus         7 ~~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   86 (239)
T PRK07666          7 GKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAYGVKVVIATADVSDYEEVTAAIEQLKNELGSID   86 (239)
T ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCCHHHHHHHHHHHHHHcCCcc
Confidence            4689999999999999999999999999999998754332211    00001133568888887776664       689


Q ss_pred             EEEECCCCCCCC---CCChhhHHHHHHHhhhhHHHHHHHHHcC--CCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCCh
Q 018503          119 AVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGND  193 (355)
Q Consensus       119 ~vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~~  193 (355)
                      +|||++|.....   ....+..+..+++|+.++.++++++...  +.+.+++|++||.... ++.          +....
T Consensus        87 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~-~~~----------~~~~~  155 (239)
T PRK07666         87 ILINNAGISKFGKFLELDPAEWEKIIQVNLMGVYYATRAVLPSMIERQSGDIINISSTAGQ-KGA----------AVTSA  155 (239)
T ss_pred             EEEEcCccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEEcchhhc-cCC----------CCCcc
Confidence            999999874321   2345566788999999998888877531  1456789999987651 221          12344


Q ss_pred             h-HHHHHHHHHHHHhc---cCCCCeEEEEEecEEEeCCCCcccchHHHHHHHhCCCCCCCCcceecccHHHHHHHHHHHH
Q 018503          194 Y-LAEVCREWEGTALK---VNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEAL  269 (355)
Q Consensus       194 y-~~k~~~~~~~~~~~---~~~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~  269 (355)
                      | .+|...+.....+.   ...++++++++|+.+.++.....           .....   ....++..+|+|++++.++
T Consensus       156 Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~-----------~~~~~---~~~~~~~~~~~a~~~~~~l  221 (239)
T PRK07666        156 YSASKFGVLGLTESLMQEVRKHNIRVTALTPSTVATDMAVDL-----------GLTDG---NPDKVMQPEDLAEFIVAQL  221 (239)
T ss_pred             hHHHHHHHHHHHHHHHHHhhccCcEEEEEecCcccCcchhhc-----------ccccc---CCCCCCCHHHHHHHHHHHH
Confidence            6 56655544443332   23589999999999987642111           00001   1124688999999999999


Q ss_pred             hCC
Q 018503          270 SNP  272 (355)
Q Consensus       270 ~~~  272 (355)
                      ..+
T Consensus       222 ~~~  224 (239)
T PRK07666        222 KLN  224 (239)
T ss_pred             hCC
Confidence            875

>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase

Probab=99.72  E-value=4.3e-16  Score=134.28  Aligned_cols=208  Identities=13%  Similarity=0.060  Sum_probs=137.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchh--hccCCCCCCccCCCeeecCCcchhhhc-------CCCcE
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKA--ELIFPGKKTRFFPGVMIAEEPQWRDCI-------QGSTA  119 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~--~~~~~~~~~~~~~~~d~~~~~~~~~~~-------~~~d~  119 (355)
                      ++++|+||||+|+||.+++++|+++|++|++++|+....  ..............+|+.+.+++.+++       .++|+
T Consensus         4 ~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~   83 (248)
T TIGR01832         4 EGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSEPSETQQQVEALGRRFLSLTADLSDIEAIKALVDSAVEEFGHIDI   83 (248)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            347899999999999999999999999999999975321  111110100113457888888776554       35899


Q ss_pred             EEECCCCCCCC---CCChhhHHHHHHHhhhhHHHHHHHHHcC--CCC-CCcEEEEeeeeeeeeCCCCCccccCCCCCCCh
Q 018503          120 VVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PEG-VRPSVLVSATALGYYGTSETEVFDESSPSGND  193 (355)
Q Consensus       120 vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~-~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~~  193 (355)
                      +||+||.....   ....+.+...+++|+.++..+++++...  ..+ .+++|++||...  |...         +..+.
T Consensus        84 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~--~~~~---------~~~~~  152 (248)
T TIGR01832        84 LVNNAGIIRRADAEEFSEKDWDDVMNVNLKSVFFLTQAAAKHFLKQGRGGKIINIASMLS--FQGG---------IRVPS  152 (248)
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEecHHh--ccCC---------CCCch
Confidence            99999974321   2234566788999999999998877531  122 468999999766  5421         12345


Q ss_pred             h-HHHHHHHHHHHHhccC---CCCeEEEEEecEEEeCCCCcccchHHHH-HHHhCCCCCCCCcceecccHHHHHHHHHHH
Q 018503          194 Y-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLF-MMFAGGPLGSGQQWFSWIHLDDIVNLIYEA  268 (355)
Q Consensus       194 y-~~k~~~~~~~~~~~~~---~~~~~~i~Rp~~i~G~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~  268 (355)
                      | .+|...+.+.+.+..+   .|++++.++||.+..+............ ......+      ...++..+|+|++++.+
T Consensus       153 Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~dva~~~~~l  226 (248)
T TIGR01832       153 YTASKHGVAGLTKLLANEWAAKGINVNAIAPGYMATNNTQALRADEDRNAAILERIP------AGRWGTPDDIGGPAVFL  226 (248)
T ss_pred             hHHHHHHHHHHHHHHHHHhCccCcEEEEEEECcCcCcchhccccChHHHHHHHhcCC------CCCCcCHHHHHHHHHHH
Confidence            7 7777666666555443   4899999999999876432110000000 1111111      23589999999999999


Q ss_pred             HhCCC
Q 018503          269 LSNPS  273 (355)
Q Consensus       269 ~~~~~  273 (355)
                      +....
T Consensus       227 ~s~~~  231 (248)
T TIGR01832       227 ASSAS  231 (248)
T ss_pred             cCccc
Confidence            97543

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.

>PRK07825 short chain dehydrogenase; Provisional

Probab=99.72  E-value=2.5e-16  Score=137.76  Aligned_cols=197  Identities=15%  Similarity=0.083  Sum_probs=131.8

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhc-------CCCcEEEE
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCI-------QGSTAVVN  122 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~-------~~~d~vi~  122 (355)
                      +++|+||||||.||+++++.|+++|++|++++|+++................+|+.|++++.+++       .++|++||
T Consensus         5 ~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~   84 (273)
T PRK07825          5 GKVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAELGLVVGGPLDVTDPASFAAFLDAVEADLGPIDVLVN   84 (273)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccceEEEccCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            46899999999999999999999999999999987654432111000114457888888765544       36799999


Q ss_pred             CCCCCCC---CCCChhhHHHHHHHhhhhHHHHHHHHHcC--CCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCChh-HH
Q 018503          123 LAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-LA  196 (355)
Q Consensus       123 ~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~~y-~~  196 (355)
                      +||....   .....+.....+++|+.++..+++++...  ..+.+++|++||...  +..         .+....| .+
T Consensus        85 ~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~--~~~---------~~~~~~Y~as  153 (273)
T PRK07825         85 NAGVMPVGPFLDEPDAVTRRILDVNVYGVILGSKLAAPRMVPRGRGHVVNVASLAG--KIP---------VPGMATYCAS  153 (273)
T ss_pred             CCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEcCccc--cCC---------CCCCcchHHH
Confidence            9997432   12234556778899999888877665321  146678999999765  321         1223456 66


Q ss_pred             HHHHHHHHHHhc---cCCCCeEEEEEecEEEeCCCCcccchHHHHHHHhCCCCCCCCcceecccHHHHHHHHHHHHhCCC
Q 018503          197 EVCREWEGTALK---VNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPS  273 (355)
Q Consensus       197 k~~~~~~~~~~~---~~~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~  273 (355)
                      |.......+.+.   ...|+++++++|+.+..+.....             .   ......++..+|+|++++.++.++.
T Consensus       154 Kaa~~~~~~~l~~el~~~gi~v~~v~Pg~v~t~~~~~~-------------~---~~~~~~~~~~~~va~~~~~~l~~~~  217 (273)
T PRK07825        154 KHAVVGFTDAARLELRGTGVHVSVVLPSFVNTELIAGT-------------G---GAKGFKNVEPEDVAAAIVGTVAKPR  217 (273)
T ss_pred             HHHHHHHHHHHHHHhhccCcEEEEEeCCcCcchhhccc-------------c---cccCCCCCCHHHHHHHHHHHHhCCC
Confidence            654433332222   23589999999998765421110             0   0112347899999999999998764

>PRK06196 oxidoreductase; Provisional

Probab=99.72  E-value=5.5e-16  Score=138.30  Aligned_cols=217  Identities=15%  Similarity=0.049  Sum_probs=135.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhc-------CCCcEEE
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCI-------QGSTAVV  121 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~-------~~~d~vi  121 (355)
                      ++++|+||||+|+||.+++++|+++|++|++++|+.+................+|+.|.+++.+++       .++|++|
T Consensus        25 ~~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~~~~~~~~~~~l~~v~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~li  104 (315)
T PRK06196         25 SGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAGIDGVEVVMLDLADLESVRAFAERFLDSGRRIDILI  104 (315)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhhCeEEEccCCCHHHHHHHHHHHHhcCCCCCEEE
Confidence            347899999999999999999999999999999987654332211000114457999888877655       3689999


Q ss_pred             ECCCCCCC-CCCChhhHHHHHHHhhhhHHHHHHH----HHcCCCCCCcEEEEeeeeeeeeCCCCCcccc--CCCCCCChh
Q 018503          122 NLAGTPIG-TRWSSEIKKEIKESRIRVTSKVVDL----INESPEGVRPSVLVSATALGYYGTSETEVFD--ESSPSGNDY  194 (355)
Q Consensus       122 ~~a~~~~~-~~~~~~~~~~~~~~n~~~~~~l~~a----~~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~--e~~~~~~~y  194 (355)
                      |+||.... .....+..+..+++|+.++..+++.    +.+  .+..++|++||.+.. ++........  ...++...|
T Consensus       105 ~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~--~~~~~iV~vSS~~~~-~~~~~~~~~~~~~~~~~~~~Y  181 (315)
T PRK06196        105 NNAGVMACPETRVGDGWEAQFATNHLGHFALVNLLWPALAA--GAGARVVALSSAGHR-RSPIRWDDPHFTRGYDKWLAY  181 (315)
T ss_pred             ECCCCCCCCCccCCccHHHHHHHhhHHHHHHHHHHHHHHHh--cCCCeEEEECCHHhc-cCCCCccccCccCCCChHHHH
Confidence            99996432 2233445677889999996665554    444  445789999997541 1111000000  011223457


Q ss_pred             -HHHHHHHHHHHHhcc---CCCCeEEEEEecEEEeCCCCcccchHHH-HHHHh--CCCCCCCCcceecccHHHHHHHHHH
Q 018503          195 -LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALAKMIPL-FMMFA--GGPLGSGQQWFSWIHLDDIVNLIYE  267 (355)
Q Consensus       195 -~~k~~~~~~~~~~~~---~~~~~~~i~Rp~~i~G~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~i~v~Dva~~~~~  267 (355)
                       .+|...+.....+..   ..|+++++++||.+.++........... .....  +.++.     ..+...+|+|..++.
T Consensus       182 ~~SK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~a~~~~~  256 (315)
T PRK06196        182 GQSKTANALFAVHLDKLGKDQGVRAFSVHPGGILTPLQRHLPREEQVALGWVDEHGNPID-----PGFKTPAQGAATQVW  256 (315)
T ss_pred             HHHHHHHHHHHHHHHHHhcCCCcEEEEeeCCcccCCccccCChhhhhhhhhhhhhhhhhh-----hhcCCHhHHHHHHHH
Confidence             777766655544432   3589999999999998753222110000 00000  00000     024678999999999


Q ss_pred             HHhCCC
Q 018503          268 ALSNPS  273 (355)
Q Consensus       268 ~~~~~~  273 (355)
                      ++..+.
T Consensus       257 l~~~~~  262 (315)
T PRK06196        257 AATSPQ  262 (315)
T ss_pred             HhcCCc
Confidence            997544

>PRK06123 short chain dehydrogenase; Provisional

Probab=99.72  E-value=5.2e-16  Score=133.73  Aligned_cols=217  Identities=16%  Similarity=0.079  Sum_probs=137.8

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCc-hhhcc----CCCCCCccCCCeeecCCcchhhhcC-------CC
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRS-KAELI----FPGKKTRFFPGVMIAEEPQWRDCIQ-------GS  117 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~-~~~~~----~~~~~~~~~~~~d~~~~~~~~~~~~-------~~  117 (355)
                      +++++||||+|+||.+++++|+++|++|+...++.. .....    ...........+|+.|.+++.++++       .+
T Consensus         2 ~~~~lVtG~~~~iG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   81 (248)
T PRK06123          2 RKVMIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQGGEALAVAADVADEADVLRLFEAVDRELGRL   81 (248)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCeEEEecCCCHHHHHHHHHHHHhCCCcEEEEEeccCCHHHHHHHHHHHHHHhCCC
Confidence            357999999999999999999999999887764432 22111    1000111134578888888777664       68


Q ss_pred             cEEEECCCCCCC----CCCChhhHHHHHHHhhhhHHHHHHHHHcC-C-C---CCCcEEEEeeeeeeeeCCCCCccccCCC
Q 018503          118 TAVVNLAGTPIG----TRWSSEIKKEIKESRIRVTSKVVDLINES-P-E---GVRPSVLVSATALGYYGTSETEVFDESS  188 (355)
Q Consensus       118 d~vi~~a~~~~~----~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~-~---~~~~~v~~Ss~~~~~yg~~~~~~~~e~~  188 (355)
                      |+|||+|+....    .....++....+++|+.++.++++++... . .   ..+++|++||.... ++...        
T Consensus        82 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~g~iv~~sS~~~~-~~~~~--------  152 (248)
T PRK06123         82 DALVNNAGILEAQMRLEQMDAARLTRIFATNVVGSFLCAREAVKRMSTRHGGRGGAIVNVSSMAAR-LGSPG--------  152 (248)
T ss_pred             CEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCeEEEEECchhhc-CCCCC--------
Confidence            999999997422    12244566788999999999888776541 0 1   12468999997542 33210        


Q ss_pred             CCCChh-HHHHHHHHHHHHhcc---CCCCeEEEEEecEEEeCCCCcccchHHHHH-HHhCCCCCCCCcceecccHHHHHH
Q 018503          189 PSGNDY-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALAKMIPLFM-MFAGGPLGSGQQWFSWIHLDDIVN  263 (355)
Q Consensus       189 ~~~~~y-~~k~~~~~~~~~~~~---~~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~v~Dva~  263 (355)
                       ....| .+|...+.+...+..   ..+++++++||+.++++...... ...... .....++.      -+.+++|+++
T Consensus       153 -~~~~Y~~sKaa~~~~~~~la~~~~~~~i~v~~i~pg~v~~~~~~~~~-~~~~~~~~~~~~p~~------~~~~~~d~a~  224 (248)
T PRK06123        153 -EYIDYAASKGAIDTMTIGLAKEVAAEGIRVNAVRPGVIYTEIHASGG-EPGRVDRVKAGIPMG------RGGTAEEVAR  224 (248)
T ss_pred             -CccchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCchhhccC-CHHHHHHHHhcCCCC------CCcCHHHHHH
Confidence             01247 777766665554433   24899999999999998532110 011111 11111221      1347899999


Q ss_pred             HHHHHHhCCC---CCCceEecCC
Q 018503          264 LIYEALSNPS---YRGVINGTAP  283 (355)
Q Consensus       264 ~~~~~~~~~~---~~~~~~i~~~  283 (355)
                      +++.++....   .+..|++.++
T Consensus       225 ~~~~l~~~~~~~~~g~~~~~~gg  247 (248)
T PRK06123        225 AILWLLSDEASYTTGTFIDVSGG  247 (248)
T ss_pred             HHHHHhCccccCccCCEEeecCC
Confidence            9999987643   3457888765

>PRK12937 short chain dehydrogenase; Provisional

Probab=99.71  E-value=8.5e-16  Score=132.16  Aligned_cols=215  Identities=16%  Similarity=0.065  Sum_probs=138.1

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchh-hc----cCCCCCCccCCCeeecCCcchhhhcC-------CC
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKA-EL----IFPGKKTRFFPGVMIAEEPQWRDCIQ-------GS  117 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~----~~~~~~~~~~~~~d~~~~~~~~~~~~-------~~  117 (355)
                      .++|+||||+|+||+++++.|+++|++|+++.|+.... ..    +...........+|+.+.+++.++++       ++
T Consensus         5 ~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   84 (245)
T PRK12937          5 NKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAAGGRAIAVQADVADAAAVTRLFDAAETAFGRI   84 (245)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            46899999999999999999999999998888765421 11    11111001133578888887776664       68


Q ss_pred             cEEEECCCCCCC---CCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCChh
Q 018503          118 TAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY  194 (355)
Q Consensus       118 d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~~y  194 (355)
                      |+|||+||....   .....+..+..+++|+.++.++++++.......+++|++||...  +..         .+....|
T Consensus        85 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~~--~~~---------~~~~~~Y  153 (245)
T PRK12937         85 DVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQGGRIINLSTSVI--ALP---------LPGYGPY  153 (245)
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhccCcEEEEEeeccc--cCC---------CCCCchh
Confidence            999999996422   22345566778899999999999887652123358999988654  221         1234557


Q ss_pred             -HHHHHHHHHHHHhccC---CCCeEEEEEecEEEeCCC-C-cccchHHHHHHHhCCCCCCCCcceecccHHHHHHHHHHH
Q 018503          195 -LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDG-G-ALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEA  268 (355)
Q Consensus       195 -~~k~~~~~~~~~~~~~---~~~~~~i~Rp~~i~G~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~  268 (355)
                       .+|...+.+...+..+   .++.++.++|+.+-.+.. + .......  ......++      ..+.+.+|+|+++..+
T Consensus       154 ~~sK~a~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~--~~~~~~~~------~~~~~~~d~a~~~~~l  225 (245)
T PRK12937        154 AASKAAVEGLVHVLANELRGRGITVNAVAPGPVATELFFNGKSAEQID--QLAGLAPL------ERLGTPEEIAAAVAFL  225 (245)
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCccCchhcccCCHHHHH--HHHhcCCC------CCCCCHHHHHHHHHHH
Confidence             7777666655544332   479999999998866531 1 1111111  11111121      1256789999999999


Q ss_pred             HhCCC---CCCceEecCC
Q 018503          269 LSNPS---YRGVINGTAP  283 (355)
Q Consensus       269 ~~~~~---~~~~~~i~~~  283 (355)
                      +..+.   .+..+++.++
T Consensus       226 ~~~~~~~~~g~~~~~~~g  243 (245)
T PRK12937        226 AGPDGAWVNGQVLRVNGG  243 (245)
T ss_pred             cCccccCccccEEEeCCC
Confidence            97643   2346666554

>PRK12824 acetoacetyl-CoA reductase; Provisional

Probab=99.71  E-value=8.3e-16  Score=132.18  Aligned_cols=216  Identities=14%  Similarity=0.058  Sum_probs=140.3

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCch-hhcc----CCCCCCccCCCeeecCCcchhhhcC-------CC
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSK-AELI----FPGKKTRFFPGVMIAEEPQWRDCIQ-------GS  117 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~-~~~~----~~~~~~~~~~~~d~~~~~~~~~~~~-------~~  117 (355)
                      +++++||||+|++|++++++|+++|++|++++|+... ....    ...........+|+.+.+++.++++       .+
T Consensus         2 ~k~vlItG~s~~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~i   81 (245)
T PRK12824          2 KKIALVTGAKRGIGSAIARELLNDGYRVIATYFSGNDCAKDWFEEYGFTEDQVRLKELDVTDTEECAEALAEIEEEEGPV   81 (245)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            3589999999999999999999999999999998531 1111    0000001134578888887766553       58


Q ss_pred             cEEEECCCCCCC---CCCChhhHHHHHHHhhhhHHHHHHHH----HcCCCCCCcEEEEeeeeeeeeCCCCCccccCCCCC
Q 018503          118 TAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLI----NESPEGVRPSVLVSATALGYYGTSETEVFDESSPS  190 (355)
Q Consensus       118 d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~----~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~  190 (355)
                      |++||++|....   .....+.++..++.|+.++.++.+++    ++  .+.+++|++||...  +..         .+.
T Consensus        82 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~~~~~iv~iss~~~--~~~---------~~~  148 (245)
T PRK12824         82 DILVNNAGITRDSVFKRMSHQEWNDVINTNLNSVFNVTQPLFAAMCE--QGYGRIINISSVNG--LKG---------QFG  148 (245)
T ss_pred             CEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHH--hCCeEEEEECChhh--ccC---------CCC
Confidence            999999997532   22345667788899999988875544    44  45678999998765  321         122


Q ss_pred             CChh-HHHHHHHHHHHHhcc---CCCCeEEEEEecEEEeCCCCcccchHHHHHHHhCCCCCCCCcceecccHHHHHHHHH
Q 018503          191 GNDY-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIY  266 (355)
Q Consensus       191 ~~~y-~~k~~~~~~~~~~~~---~~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~  266 (355)
                      .+.| .+|...+...+.+..   ..++++++++|+.+.++.......... .......+      ...+...+|+++++.
T Consensus       149 ~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~-~~~~~~~~------~~~~~~~~~va~~~~  221 (245)
T PRK12824        149 QTNYSAAKAGMIGFTKALASEGARYGITVNCIAPGYIATPMVEQMGPEVL-QSIVNQIP------MKRLGTPEEIAAAVA  221 (245)
T ss_pred             ChHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEEEcccCCcchhhcCHHHH-HHHHhcCC------CCCCCCHHHHHHHHH
Confidence            3457 667654444333322   348999999999998764322211110 01111111      223567899999999


Q ss_pred             HHHhCCC---CCCceEecCCCc
Q 018503          267 EALSNPS---YRGVINGTAPNP  285 (355)
Q Consensus       267 ~~~~~~~---~~~~~~i~~~~~  285 (355)
                      .++....   .+..+++.+|..
T Consensus       222 ~l~~~~~~~~~G~~~~~~~g~~  243 (245)
T PRK12824        222 FLVSEAAGFITGETISINGGLY  243 (245)
T ss_pred             HHcCccccCccCcEEEECCCee
Confidence            8886543   356888888764

>PRK07985 oxidoreductase; Provisional

Probab=99.71  E-value=6.6e-16  Score=136.24  Aligned_cols=219  Identities=13%  Similarity=0.029  Sum_probs=143.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCch--hhccC----CCCCCccCCCeeecCCcchhhhc-------C
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSK--AELIF----PGKKTRFFPGVMIAEEPQWRDCI-------Q  115 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~--~~~~~----~~~~~~~~~~~d~~~~~~~~~~~-------~  115 (355)
                      ..++++||||+|+||++++++|+++|++|++..|+.+.  ...+.    ..........+|+.|.+++.+++       .
T Consensus        48 ~~k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g  127 (294)
T PRK07985         48 KDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVHEAHKALG  127 (294)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            34789999999999999999999999999988775432  11111    10100113457888888776554       3


Q ss_pred             CCcEEEECCCCCC----CCCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCCCCccccCCCCCC
Q 018503          116 GSTAVVNLAGTPI----GTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSG  191 (355)
Q Consensus       116 ~~d~vi~~a~~~~----~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~  191 (355)
                      ++|++||+||...    ....+.+++...+++|+.++..+++++...-....++|++||...  +...         +..
T Consensus       128 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~iSS~~~--~~~~---------~~~  196 (294)
T PRK07985        128 GLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKGASIITTSSIQA--YQPS---------PHL  196 (294)
T ss_pred             CCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcCCEEEEECCchh--ccCC---------CCc
Confidence            5799999998632    123456777889999999999999888652112358999999876  4321         223


Q ss_pred             Chh-HHHHHHHHHHHHhccC---CCCeEEEEEecEEEeCCCCcccchHHHH-HHHhCCCCCCCCcceecccHHHHHHHHH
Q 018503          192 NDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLF-MMFAGGPLGSGQQWFSWIHLDDIVNLIY  266 (355)
Q Consensus       192 ~~y-~~k~~~~~~~~~~~~~---~~~~~~i~Rp~~i~G~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~v~Dva~~~~  266 (355)
                      ..| .+|...+.+...+..+   .|+++..++||.+.++............ ......+.      ..+...+|+|++++
T Consensus       197 ~~Y~asKaal~~l~~~la~el~~~gIrvn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~------~r~~~pedva~~~~  270 (294)
T PRK07985        197 LDYAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGGQTQDKIPQFGQQTPM------KRAGQPAELAPVYV  270 (294)
T ss_pred             chhHHHHHHHHHHHHHHHHHHhHhCcEEEEEECCcCccccccccCCCHHHHHHHhccCCC------CCCCCHHHHHHHHH
Confidence            457 7777666666555443   5899999999999987531110000111 11111111      23577999999999


Q ss_pred             HHHhCCC---CCCceEecCCC
Q 018503          267 EALSNPS---YRGVINGTAPN  284 (355)
Q Consensus       267 ~~~~~~~---~~~~~~i~~~~  284 (355)
                      .++....   .+..+.+.+|.
T Consensus       271 fL~s~~~~~itG~~i~vdgG~  291 (294)
T PRK07985        271 YLASQESSYVTAEVHGVCGGE  291 (294)
T ss_pred             hhhChhcCCccccEEeeCCCe
Confidence            9998644   34466676654

>PRK07326 short chain dehydrogenase; Provisional

Probab=99.71  E-value=4.7e-16  Score=133.06  Aligned_cols=209  Identities=15%  Similarity=0.121  Sum_probs=136.9

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCC---CCccCCCeeecCCcchhhhcC-------CCcE
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGK---KTRFFPGVMIAEEPQWRDCIQ-------GSTA  119 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~---~~~~~~~~d~~~~~~~~~~~~-------~~d~  119 (355)
                      +++|+||||+|++|++++++|+++|++|++++|++.+........   .......+|+.+.+++.++++       ++|+
T Consensus         6 ~~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~   85 (237)
T PRK07326          6 GKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNKGNVLGLAADVRDEADVQRAVDAIVAAFGGLDV   85 (237)
T ss_pred             CCEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCCHHHHHHHHHHHhccCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            468999999999999999999999999999999876543321110   000123467888877766554       6899


Q ss_pred             EEECCCCCCCC---CCChhhHHHHHHHhhhhHHHHHHHHHcC-CCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCChh-
Q 018503          120 VVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES-PEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-  194 (355)
Q Consensus       120 vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~~y-  194 (355)
                      |||+++.....   ....+.....+++|+.++..+++++... ..+.+++|++||...  +..         ......| 
T Consensus        86 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~--~~~---------~~~~~~y~  154 (237)
T PRK07326         86 LIANAGVGHFAPVEELTPEEWRLVIDTNLTGAFYTIKAAVPALKRGGGYIINISSLAG--TNF---------FAGGAAYN  154 (237)
T ss_pred             EEECCCCCCCCchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHHCCeEEEEECChhh--ccC---------CCCCchHH
Confidence            99999864321   2334556678899999999888877531 124567999998754  221         1123446 


Q ss_pred             HHHHHHHHHHHHhc---cCCCCeEEEEEecEEEeCCCCcccchHHHHHHHhCCCCCCCCcceecccHHHHHHHHHHHHhC
Q 018503          195 LAEVCREWEGTALK---VNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSN  271 (355)
Q Consensus       195 ~~k~~~~~~~~~~~---~~~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~  271 (355)
                      .+|...+.....+.   ...|++++++||+.+.++.......                ......+..+|++++++.++..
T Consensus       155 ~sk~a~~~~~~~~~~~~~~~gi~v~~v~pg~~~t~~~~~~~~----------------~~~~~~~~~~d~a~~~~~~l~~  218 (237)
T PRK07326        155 ASKFGLVGFSEAAMLDLRQYGIKVSTIMPGSVATHFNGHTPS----------------EKDAWKIQPEDIAQLVLDLLKM  218 (237)
T ss_pred             HHHHHHHHHHHHHHHHhcccCcEEEEEeeccccCcccccccc----------------hhhhccCCHHHHHHHHHHHHhC
Confidence            56654444443332   2358999999999987764221100                0000137899999999999987


Q ss_pred             CC--CCCceEecCCCc
Q 018503          272 PS--YRGVINGTAPNP  285 (355)
Q Consensus       272 ~~--~~~~~~i~~~~~  285 (355)
                      +.  ......+..+++
T Consensus       219 ~~~~~~~~~~~~~~~~  234 (237)
T PRK07326        219 PPRTLPSKIEVRPSRP  234 (237)
T ss_pred             CccccccceEEecCCC
Confidence            75  333555555444

>PRK06181 short chain dehydrogenase; Provisional

Probab=99.71  E-value=4.5e-16  Score=135.35  Aligned_cols=204  Identities=17%  Similarity=0.152  Sum_probs=135.6

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccC----CCCCCccCCCeeecCCcchhhhcC-------CCcE
Q 018503           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIF----PGKKTRFFPGVMIAEEPQWRDCIQ-------GSTA  119 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~~~~~~~~~~~d~~~~~~~~~~~~-------~~d~  119 (355)
                      ++||||||+|+||+++++.|++.|++|++++|+..+.....    ..........+|+.|.+.+.++++       ++|+
T Consensus         2 ~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   81 (263)
T PRK06181          2 KVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADHGGEALVVPTDVSDAEACERLIEAAVARFGGIDI   81 (263)
T ss_pred             CEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            58999999999999999999999999999999875533221    111101133568888887776654       6899


Q ss_pred             EEECCCCCCCC---CC-ChhhHHHHHHHhhhhHHHHHHHHHcC-CCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCChh
Q 018503          120 VVNLAGTPIGT---RW-SSEIKKEIKESRIRVTSKVVDLINES-PEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY  194 (355)
Q Consensus       120 vi~~a~~~~~~---~~-~~~~~~~~~~~n~~~~~~l~~a~~~~-~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~~y  194 (355)
                      |||+++.....   .. ..+.....+++|+.++.++++.+... ..+.+++|++||...  +..         .+....|
T Consensus        82 vi~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~iv~~sS~~~--~~~---------~~~~~~Y  150 (263)
T PRK06181         82 LVNNAGITMWSRFDELTDLSVFERVMRVNYLGAVYCTHAALPHLKASRGQIVVVSSLAG--LTG---------VPTRSGY  150 (263)
T ss_pred             EEECCCcccccchhccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCEEEEEecccc--cCC---------CCCccHH
Confidence            99999864321   12 34445677899999999999887531 124568999998776  432         1233567


Q ss_pred             -HHHHHHHHHHHHhc---cCCCCeEEEEEecEEEeCCCCcccchHHHHHHHhCCCC-CCCCcceecccHHHHHHHHHHHH
Q 018503          195 -LAEVCREWEGTALK---VNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPL-GSGQQWFSWIHLDDIVNLIYEAL  269 (355)
Q Consensus       195 -~~k~~~~~~~~~~~---~~~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~v~Dva~~~~~~~  269 (355)
                       .+|...+.....+.   ...++++++++|+.+..+.....   ..    ..+.+. ..+.....+++++|+|++++.++
T Consensus       151 ~~sK~~~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~~---~~----~~~~~~~~~~~~~~~~~~~~dva~~i~~~~  223 (263)
T PRK06181        151 AASKHALHGFFDSLRIELADDGVAVTVVCPGFVATDIRKRA---LD----GDGKPLGKSPMQESKIMSAEECAEAILPAI  223 (263)
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCceEEEEecCccccCcchhh---cc----ccccccccccccccCCCCHHHHHHHHHHHh
Confidence             67766555544332   23589999999999877642211   00    011111 11122236899999999999999


Q ss_pred             hCC
Q 018503          270 SNP  272 (355)
Q Consensus       270 ~~~  272 (355)
                      ...
T Consensus       224 ~~~  226 (263)
T PRK06181        224 ARR  226 (263)
T ss_pred             hCC
Confidence            864

>PRK05650 short chain dehydrogenase; Provisional

Probab=99.71  E-value=6.9e-16  Score=134.72  Aligned_cols=204  Identities=17%  Similarity=0.138  Sum_probs=133.3

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccC----CCCCCccCCCeeecCCcchhhhcC-------CCcE
Q 018503           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIF----PGKKTRFFPGVMIAEEPQWRDCIQ-------GSTA  119 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~~~~~~~~~~~d~~~~~~~~~~~~-------~~d~  119 (355)
                      |+|+||||+|+||++++++|+++|++|++++|+.+......    ..........+|+.|.+++.++++       ++|+
T Consensus         1 ~~vlVtGasggIG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id~   80 (270)
T PRK05650          1 NRVMITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREAGGDGFYQRCDVRDYSQLTALAQACEEKWGGIDV   80 (270)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            57999999999999999999999999999999876543221    111111134578888887766553       6899


Q ss_pred             EEECCCCCCC---CCCChhhHHHHHHHhhhhHHHHHHHH----HcCCCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCC
Q 018503          120 VVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLI----NESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGN  192 (355)
Q Consensus       120 vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~----~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~  192 (355)
                      |||+||....   .....+..+..+++|+.++..+.+++    .+  .+.+++|++||...  +..         .+...
T Consensus        81 lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~~~~~iv~vsS~~~--~~~---------~~~~~  147 (270)
T PRK05650         81 IVNNAGVASGGFFEELSLEDWDWQIAINLMGVVKGCKAFLPLFKR--QKSGRIVNIASMAG--LMQ---------GPAMS  147 (270)
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHh--CCCCEEEEECChhh--cCC---------CCCch
Confidence            9999997432   22234556678899988877766654    44  46678999998765  321         12235


Q ss_pred             hh-HHHHHHHHHHHHhccC---CCCeEEEEEecEEEeCCCCcccchHHHHHHHhCCCCCCCCcceecccHHHHHHHHHHH
Q 018503          193 DY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEA  268 (355)
Q Consensus       193 ~y-~~k~~~~~~~~~~~~~---~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~  268 (355)
                      .| .+|...+...+.+..+   .|+++++++|+.+..+.........+.........     ....+++++|+|+.++.+
T Consensus       148 ~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~vA~~i~~~  222 (270)
T PRK05650        148 SYNVAKAGVVALSETLLVELADDEIGVHVVCPSFFQTNLLDSFRGPNPAMKAQVGKL-----LEKSPITAADIADYIYQQ  222 (270)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCccccCcccccccCchhHHHHHHHH-----hhcCCCCHHHHHHHHHHH
Confidence            67 6676554444433332   48999999999998775332211111110000000     012358999999999999


Q ss_pred             HhCC
Q 018503          269 LSNP  272 (355)
Q Consensus       269 ~~~~  272 (355)
                      +.++
T Consensus       223 l~~~  226 (270)
T PRK05650        223 VAKG  226 (270)
T ss_pred             HhCC
Confidence            9864

>PRK08324 short chain dehydrogenase; Validated

Probab=99.71  E-value=4.2e-16  Score=152.40  Aligned_cols=226  Identities=17%  Similarity=0.105  Sum_probs=149.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCC---CCccCCCeeecCCcchhhhcC-------CCc
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGK---KTRFFPGVMIAEEPQWRDCIQ-------GST  118 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~---~~~~~~~~d~~~~~~~~~~~~-------~~d  118 (355)
                      .+++|+||||+|+||+++++.|++.|++|++++|+.+.........   .......+|+.|.+++.++++       ++|
T Consensus       421 ~gk~vLVTGasggIG~~la~~L~~~Ga~Vvl~~r~~~~~~~~~~~l~~~~~v~~v~~Dvtd~~~v~~~~~~~~~~~g~iD  500 (681)
T PRK08324        421 AGKVALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAAELGGPDRALGVACDVTDEAAVQAAFEEAALAFGGVD  500 (681)
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHhccCcEEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence            4579999999999999999999999999999999876543321110   001133568888887766553       689


Q ss_pred             EEEECCCCCCC---CCCChhhHHHHHHHhhhhHHHHHHHHHcC--CCCC-CcEEEEeeeeeeeeCCCCCccccCCCCCCC
Q 018503          119 AVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGV-RPSVLVSATALGYYGTSETEVFDESSPSGN  192 (355)
Q Consensus       119 ~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~-~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~  192 (355)
                      +|||+||....   .....+.+...+++|+.++..+++++...  ..+. .++|++||.... ++          .+...
T Consensus       501 vvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~~g~iV~vsS~~~~-~~----------~~~~~  569 (681)
T PRK08324        501 IVVSNAGIAISGPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQGLGGSIVFIASKNAV-NP----------GPNFG  569 (681)
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCcEEEEECCcccc-CC----------CCCcH
Confidence            99999997432   22345667788999999999997776431  1233 689999997652 22          12234


Q ss_pred             hh-HHHHHHHHHHHHhccC---CCCeEEEEEecEEE-eCCCCcccchHHHHHHHhCC-------CCCCCCcceecccHHH
Q 018503          193 DY-LAEVCREWEGTALKVN---KDVRLALIRIGIVL-GKDGGALAKMIPLFMMFAGG-------PLGSGQQWFSWIHLDD  260 (355)
Q Consensus       193 ~y-~~k~~~~~~~~~~~~~---~~~~~~i~Rp~~i~-G~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~i~v~D  260 (355)
                      .| .+|...+.+...+..+   .|+++++++|+.+| +...... .+........+.       .+..+...+.+++++|
T Consensus       570 ~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~Pg~v~~~t~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~v~~~D  648 (681)
T PRK08324        570 AYGAAKAAELHLVRQLALELGPDGIRVNGVNPDAVVRGSGIWTG-EWIEARAAAYGLSEEELEEFYRARNLLKREVTPED  648 (681)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcccCeEEEEEeCceeecCCccccc-hhhhhhhhhccCChHHHHHHHHhcCCcCCccCHHH
Confidence            67 7777777666655433   47999999999998 5432110 011000000010       0123344567899999


Q ss_pred             HHHHHHHHHhC--CC-CCCceEecCCCcc
Q 018503          261 IVNLIYEALSN--PS-YRGVINGTAPNPV  286 (355)
Q Consensus       261 va~~~~~~~~~--~~-~~~~~~i~~~~~~  286 (355)
                      +|++++.++..  .. .+.+|++.+|...
T Consensus       649 vA~a~~~l~s~~~~~~tG~~i~vdgG~~~  677 (681)
T PRK08324        649 VAEAVVFLASGLLSKTTGAIITVDGGNAA  677 (681)
T ss_pred             HHHHHHHHhCccccCCcCCEEEECCCchh
Confidence            99999999852  22 3458999888644

>PRK06398 aldose dehydrogenase; Validated

Probab=99.71  E-value=6.3e-16  Score=133.95  Aligned_cols=216  Identities=11%  Similarity=0.011  Sum_probs=140.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcC-------CCcEEE
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ-------GSTAVV  121 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-------~~d~vi  121 (355)
                      +++++|||||+|.||++++++|++.|++|++++|+......    .   ....+|+.|++++.++++       .+|++|
T Consensus         5 ~gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~~~~~----~---~~~~~D~~~~~~i~~~~~~~~~~~~~id~li   77 (258)
T PRK06398          5 KDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPSYND----V---DYFKVDVSNKEQVIKGIDYVISKYGRIDILV   77 (258)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCccccCc----e---EEEEccCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            34799999999999999999999999999999998654321    1   144579999888776653       689999


Q ss_pred             ECCCCCCC---CCCChhhHHHHHHHhhhhHHHHHHHHHcC--CCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCChh-H
Q 018503          122 NLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-L  195 (355)
Q Consensus       122 ~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~~y-~  195 (355)
                      |+||....   .....+.+...+++|+.++..+++++...  ..+.+++|++||...  +..         .+....| .
T Consensus        78 ~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~--~~~---------~~~~~~Y~~  146 (258)
T PRK06398         78 NNAGIESYGAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLKQDKGVIINIASVQS--FAV---------TRNAAAYVT  146 (258)
T ss_pred             ECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeCcchh--ccC---------CCCCchhhh
Confidence            99997422   22345667788999999998888776431  135578999999765  331         1234567 7


Q ss_pred             HHHHHHHHHHHhccCC--CCeEEEEEecEEEeCCCCccc------chHHHHHHHhCCCCCCCCcceecccHHHHHHHHHH
Q 018503          196 AEVCREWEGTALKVNK--DVRLALIRIGIVLGKDGGALA------KMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYE  267 (355)
Q Consensus       196 ~k~~~~~~~~~~~~~~--~~~~~i~Rp~~i~G~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~  267 (355)
                      +|...+.+.+.+..+.  ++++..++||.+..+......      ..........  .+........+...+|+|++++.
T Consensus       147 sKaal~~~~~~la~e~~~~i~vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~p~eva~~~~~  224 (258)
T PRK06398        147 SKHAVLGLTRSIAVDYAPTIRCVAVCPGSIRTPLLEWAAELEVGKDPEHVERKIR--EWGEMHPMKRVGKPEEVAYVVAF  224 (258)
T ss_pred             hHHHHHHHHHHHHHHhCCCCEEEEEecCCccchHHhhhhhccccCChhhhHHHHH--hhhhcCCcCCCcCHHHHHHHHHH
Confidence            7776666665554432  489999999988655311100      0000000000  00111112246789999999999


Q ss_pred             HHhCCC---CCCceEecCCC
Q 018503          268 ALSNPS---YRGVINGTAPN  284 (355)
Q Consensus       268 ~~~~~~---~~~~~~i~~~~  284 (355)
                      ++....   .+..+.+.+|.
T Consensus       225 l~s~~~~~~~G~~i~~dgg~  244 (258)
T PRK06398        225 LASDLASFITGECVTVDGGL  244 (258)
T ss_pred             HcCcccCCCCCcEEEECCcc
Confidence            987543   33356666654

>PRK07856 short chain dehydrogenase; Provisional

Probab=99.71  E-value=1.2e-15  Score=131.81  Aligned_cols=217  Identities=18%  Similarity=0.076  Sum_probs=142.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcC-------CCcEEE
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ-------GSTAVV  121 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-------~~d~vi  121 (355)
                      +.++++||||+|.||++++++|+++|++|++++|+.+.... ...   .....+|+.+++++.++++       .+|+||
T Consensus         5 ~~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~~~~~~~-~~~---~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi   80 (252)
T PRK07856          5 TGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPETVD-GRP---AEFHAADVRDPDQVAALVDAIVERHGRLDVLV   80 (252)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCChhhhhc-CCc---eEEEEccCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            35799999999999999999999999999999998754111 000   1134578888887776653       469999


Q ss_pred             ECCCCCCC---CCCChhhHHHHHHHhhhhHHHHHHHHHcC-C--CCCCcEEEEeeeeeeeeCCCCCccccCCCCCCChh-
Q 018503          122 NLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES-P--EGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-  194 (355)
Q Consensus       122 ~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~--~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~~y-  194 (355)
                      |+||....   .....+..+..+++|+.++..+++++... .  .+..++|++||...  +..         .+....| 
T Consensus        81 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~--~~~---------~~~~~~Y~  149 (252)
T PRK07856         81 NNAGGSPYALAAEASPRFHEKIVELNLLAPLLVAQAANAVMQQQPGGGSIVNIGSVSG--RRP---------SPGTAAYG  149 (252)
T ss_pred             ECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEccccc--CCC---------CCCCchhH
Confidence            99996422   23345667788999999999999877531 1  23468999999765  321         1223567 


Q ss_pred             HHHHHHHHHHHHhccCC--CCeEEEEEecEEEeCCCCcccchHHHH-HHHhCCCCCCCCcceecccHHHHHHHHHHHHhC
Q 018503          195 LAEVCREWEGTALKVNK--DVRLALIRIGIVLGKDGGALAKMIPLF-MMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSN  271 (355)
Q Consensus       195 ~~k~~~~~~~~~~~~~~--~~~~~i~Rp~~i~G~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~  271 (355)
                      .+|...+.+.+.+..+.  .+.+..++|+.+..+.......-.... ......+.      ..+...+|+|++++.++..
T Consensus       150 ~sK~a~~~l~~~la~e~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~------~~~~~p~~va~~~~~L~~~  223 (252)
T PRK07856        150 AAKAGLLNLTRSLAVEWAPKVRVNAVVVGLVRTEQSELHYGDAEGIAAVAATVPL------GRLATPADIAWACLFLASD  223 (252)
T ss_pred             HHHHHHHHHHHHHHHHhcCCeEEEEEEeccccChHHhhhccCHHHHHHHhhcCCC------CCCcCHHHHHHHHHHHcCc
Confidence            77776666665554432  388999999998766421110000111 11111111      2356889999999999875


Q ss_pred             CC---CCCceEecCCCcc
Q 018503          272 PS---YRGVINGTAPNPV  286 (355)
Q Consensus       272 ~~---~~~~~~i~~~~~~  286 (355)
                      ..   .+..+.+.+|...
T Consensus       224 ~~~~i~G~~i~vdgg~~~  241 (252)
T PRK07856        224 LASYVSGANLEVHGGGER  241 (252)
T ss_pred             ccCCccCCEEEECCCcch
Confidence            43   3346677666533

>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional

Probab=99.70  E-value=5.3e-16  Score=133.60  Aligned_cols=217  Identities=17%  Similarity=0.102  Sum_probs=133.6

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhCCCeEEEE-ecCCchhhccCC----CCCCccCCCeeecCCcchhhhcC-------CCc
Q 018503           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVL-TRSRSKAELIFP----GKKTRFFPGVMIAEEPQWRDCIQ-------GST  118 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~g~~V~~~-~r~~~~~~~~~~----~~~~~~~~~~d~~~~~~~~~~~~-------~~d  118 (355)
                      ++++||||+|+||++++++|+++|++|+++ .|+.+.......    .........+|+.|++++.++++       ++|
T Consensus         2 ~~~lItGa~g~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~id   81 (247)
T PRK09730          2 AIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQAGGKAFVLQADISDENQVVAMFTAIDQHDEPLA   81 (247)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhCCCeEEEEEccCCCHHHHHHHHHHHHHhCCCCC
Confidence            479999999999999999999999999875 455443221111    00001134578889888776654       469


Q ss_pred             EEEECCCCCCC----CCCChhhHHHHHHHhhhhHHHHHHHHHcC-----CCCCCcEEEEeeeeeeeeCCCCCccccCCCC
Q 018503          119 AVVNLAGTPIG----TRWSSEIKKEIKESRIRVTSKVVDLINES-----PEGVRPSVLVSATALGYYGTSETEVFDESSP  189 (355)
Q Consensus       119 ~vi~~a~~~~~----~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-----~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~  189 (355)
                      +|||+++....    .....+.....+++|+.++..+++++...     ....+++|++||.... ++.. +        
T Consensus        82 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~~v~~sS~~~~-~~~~-~--------  151 (247)
T PRK09730         82 ALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCREAVKRMALKHGGSGGAIVNVSSAASR-LGAP-G--------  151 (247)
T ss_pred             EEEECCCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhc-cCCC-C--------
Confidence            99999996422    22234556788899999988777655331     0123569999997551 3311 0        


Q ss_pred             CCChh-HHHHHHHHHHHHhcc---CCCCeEEEEEecEEEeCCCCcccchHHHHHHHhCCCCCCCCcceecccHHHHHHHH
Q 018503          190 SGNDY-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLI  265 (355)
Q Consensus       190 ~~~~y-~~k~~~~~~~~~~~~---~~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~  265 (355)
                      ....| .+|...+...+.+..   ..+++++++||+.++++..................++.      .....+|+|+++
T Consensus       152 ~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~i~pg~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~dva~~~  225 (247)
T PRK09730        152 EYVDYAASKGAIDTLTTGLSLEVAAQGIRVNCVRPGFIYTEMHASGGEPGRVDRVKSNIPMQ------RGGQPEEVAQAI  225 (247)
T ss_pred             cccchHhHHHHHHHHHHHHHHHHHHhCeEEEEEEeCCCcCcccccCCCHHHHHHHHhcCCCC------CCcCHHHHHHHH
Confidence            11246 666655555443332   24899999999999998532111100011111222221      124789999999


Q ss_pred             HHHHhCCC---CCCceEecCC
Q 018503          266 YEALSNPS---YRGVINGTAP  283 (355)
Q Consensus       266 ~~~~~~~~---~~~~~~i~~~  283 (355)
                      +.++..+.   .+..|.+.++
T Consensus       226 ~~~~~~~~~~~~g~~~~~~g~  246 (247)
T PRK09730        226 VWLLSDKASYVTGSFIDLAGG  246 (247)
T ss_pred             HhhcChhhcCccCcEEecCCC
Confidence            99987642   3336666553

>PRK06114 short chain dehydrogenase; Provisional

Probab=99.70  E-value=1.4e-15  Score=131.63  Aligned_cols=219  Identities=13%  Similarity=0.084  Sum_probs=139.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchh-hcc----CCCCCCccCCCeeecCCcchhhhcC-------C
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKA-ELI----FPGKKTRFFPGVMIAEEPQWRDCIQ-------G  116 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~~----~~~~~~~~~~~~d~~~~~~~~~~~~-------~  116 (355)
                      ..++++||||+|.||++++++|++.|++|++++|+.+.. ...    ...........+|+.|++++.++++       .
T Consensus         7 ~~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~   86 (254)
T PRK06114          7 DGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTSKADLRAAVARTEAELGA   86 (254)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            347899999999999999999999999999999976432 111    1111001133578888887766553       4


Q ss_pred             CcEEEECCCCCCC---CCCChhhHHHHHHHhhhhHHHHHHHHHcC--CCCCCcEEEEeeeeeeeeCCCCCccccCCCCCC
Q 018503          117 STAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSG  191 (355)
Q Consensus       117 ~d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~  191 (355)
                      +|++||+||....   .....+..+..+++|+.++..+++++...  ..+.+++|++||.... ++..        .+..
T Consensus        87 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~-~~~~--------~~~~  157 (254)
T PRK06114         87 LTLAVNAAGIANANPAEEMEEEQWQTVMDINLTGVFLSCQAEARAMLENGGGSIVNIASMSGI-IVNR--------GLLQ  157 (254)
T ss_pred             CCEEEECCCCCCCCChHhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcEEEEECchhhc-CCCC--------CCCc
Confidence            7999999997432   23345667888999999987776665321  1355689999987651 2211        1113


Q ss_pred             Chh-HHHHHHHHHHHHhcc---CCCCeEEEEEecEEEeCCCCcccchHHHH-HHHhCCCCCCCCcceecccHHHHHHHHH
Q 018503          192 NDY-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALAKMIPLF-MMFAGGPLGSGQQWFSWIHLDDIVNLIY  266 (355)
Q Consensus       192 ~~y-~~k~~~~~~~~~~~~---~~~~~~~i~Rp~~i~G~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~v~Dva~~~~  266 (355)
                      ..| .+|...+.+.+.+..   ..|+++.+++||.+.++..... ...... ......+++      .+...+|+|++++
T Consensus       158 ~~Y~~sKaa~~~l~~~la~e~~~~gi~v~~v~PG~i~t~~~~~~-~~~~~~~~~~~~~p~~------r~~~~~dva~~~~  230 (254)
T PRK06114        158 AHYNASKAGVIHLSKSLAMEWVGRGIRVNSISPGYTATPMNTRP-EMVHQTKLFEEQTPMQ------RMAKVDEMVGPAV  230 (254)
T ss_pred             chHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeecCccCcccccc-cchHHHHHHHhcCCCC------CCcCHHHHHHHHH
Confidence            457 677655555444433   3589999999999987643211 111111 111122221      2567899999999


Q ss_pred             HHHhCCC---CCCceEecCC
Q 018503          267 EALSNPS---YRGVINGTAP  283 (355)
Q Consensus       267 ~~~~~~~---~~~~~~i~~~  283 (355)
                      .++....   .+.++.+.+|
T Consensus       231 ~l~s~~~~~~tG~~i~~dgg  250 (254)
T PRK06114        231 FLLSDAASFCTGVDLLVDGG  250 (254)
T ss_pred             HHcCccccCcCCceEEECcC
Confidence            9987543   3346666555

>PRK08643 acetoin reductase; Validated

Probab=99.70  E-value=1.1e-15  Score=132.27  Aligned_cols=218  Identities=16%  Similarity=0.063  Sum_probs=137.2

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCC----CCCccCCCeeecCCcchhhhcC-------CCc
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG----KKTRFFPGVMIAEEPQWRDCIQ-------GST  118 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~----~~~~~~~~~d~~~~~~~~~~~~-------~~d  118 (355)
                      +++++||||+|+||+++++.|+++|++|++++|+.+........    ........+|+.+++.+.++++       ++|
T Consensus         2 ~k~~lItGas~giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   81 (256)
T PRK08643          2 SKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSDRDQVFAAVRQVVDTFGDLN   81 (256)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence            46899999999999999999999999999999987553322111    0001134578888887766553       589


Q ss_pred             EEEECCCCCCC---CCCChhhHHHHHHHhhhhHHHHHHHHHcC--CC-CCCcEEEEeeeeeeeeCCCCCccccCCCCCCC
Q 018503          119 AVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PE-GVRPSVLVSATALGYYGTSETEVFDESSPSGN  192 (355)
Q Consensus       119 ~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~-~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~  192 (355)
                      +|||+||....   .....+.....+++|+.++..+++++...  .. ...++|++||.... ++.          +...
T Consensus        82 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~-~~~----------~~~~  150 (256)
T PRK08643         82 VVVNNAGVAPTTPIETITEEQFDKVYNINVGGVIWGIQAAQEAFKKLGHGGKIINATSQAGV-VGN----------PELA  150 (256)
T ss_pred             EEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECccccc-cCC----------CCCc
Confidence            99999986422   12234566788899999988777666431  01 23579999987651 331          1234


Q ss_pred             hh-HHHHHHHHHHHHhcc---CCCCeEEEEEecEEEeCCCCcccch-------HHH--HHHHhCCCCCCCCcceecccHH
Q 018503          193 DY-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALAKM-------IPL--FMMFAGGPLGSGQQWFSWIHLD  259 (355)
Q Consensus       193 ~y-~~k~~~~~~~~~~~~---~~~~~~~i~Rp~~i~G~~~~~~~~~-------~~~--~~~~~~~~~~~~~~~~~~i~v~  259 (355)
                      .| .+|...+...+.+..   ..|++++.++|+.+.++........       ...  ....... +    ....+...+
T Consensus       151 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~----~~~~~~~~~  225 (256)
T PRK08643        151 VYSSTKFAVRGLTQTAARDLASEGITVNAYAPGIVKTPMMFDIAHQVGENAGKPDEWGMEQFAKD-I----TLGRLSEPE  225 (256)
T ss_pred             hhHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCCCcChhhhHHHhhhccccCCCchHHHHHHhcc-C----CCCCCcCHH
Confidence            56 677665554444333   3589999999999987642110000       000  0000000 0    112357899


Q ss_pred             HHHHHHHHHHhCCC--CCC-ceEecCC
Q 018503          260 DIVNLIYEALSNPS--YRG-VINGTAP  283 (355)
Q Consensus       260 Dva~~~~~~~~~~~--~~~-~~~i~~~  283 (355)
                      |+|+++..++....  ..| .+.+.+|
T Consensus       226 ~va~~~~~L~~~~~~~~~G~~i~vdgg  252 (256)
T PRK08643        226 DVANCVSFLAGPDSDYITGQTIIVDGG  252 (256)
T ss_pred             HHHHHHHHHhCccccCccCcEEEeCCC
Confidence            99999999997543  333 5555554

>PRK05693 short chain dehydrogenase; Provisional

Probab=99.70  E-value=8.8e-16  Score=134.33  Aligned_cols=215  Identities=13%  Similarity=0.080  Sum_probs=137.3

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhc-------CCCcEEEEC
Q 018503           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCI-------QGSTAVVNL  123 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~-------~~~d~vi~~  123 (355)
                      |+++||||+|+||++++++|+++|++|++++|+............  ....+|+.+.+++.+++       .++|+|||+
T Consensus         2 k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~   79 (274)
T PRK05693          2 PVVLITGCSSGIGRALADAFKAAGYEVWATARKAEDVEALAAAGF--TAVQLDVNDGAALARLAEELEAEHGGLDVLINN   79 (274)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHCCC--eEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEEC
Confidence            689999999999999999999999999999998765443322110  13457888888776655       368999999


Q ss_pred             CCCCCCC---CCChhhHHHHHHHhhhhHHHHHHHHHcC-CCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCChh-HHHH
Q 018503          124 AGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES-PEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-LAEV  198 (355)
Q Consensus       124 a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~~y-~~k~  198 (355)
                      ||.....   ....+.....+++|+.++..+++++... ..+..++|++||...  +..         .+....| .+|.
T Consensus        80 ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~--~~~---------~~~~~~Y~~sK~  148 (274)
T PRK05693         80 AGYGAMGPLLDGGVEAMRRQFETNVFAVVGVTRALFPLLRRSRGLVVNIGSVSG--VLV---------TPFAGAYCASKA  148 (274)
T ss_pred             CCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCEEEEECCccc--cCC---------CCCccHHHHHHH
Confidence            9964321   2345667788999999998888876431 123467888888654  211         1223457 6776


Q ss_pred             HHHHHHHHhcc---CCCCeEEEEEecEEEeCCCCccc-----------chHHHHHHHhCCCCCCCCcceecccHHHHHHH
Q 018503          199 CREWEGTALKV---NKDVRLALIRIGIVLGKDGGALA-----------KMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNL  264 (355)
Q Consensus       199 ~~~~~~~~~~~---~~~~~~~i~Rp~~i~G~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~  264 (355)
                      ..+...+.+..   ..|++++.++||.+..+......           .+.+.............   -.....+|+|+.
T Consensus       149 al~~~~~~l~~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~a~~  225 (274)
T PRK05693        149 AVHALSDALRLELAPFGVQVMEVQPGAIASQFASNASREAEQLLAEQSPWWPLREHIQARARASQ---DNPTPAAEFARQ  225 (274)
T ss_pred             HHHHHHHHHHHHhhhhCeEEEEEecCccccccccccccchhhcCCCCCccHHHHHHHHHHHHhcc---CCCCCHHHHHHH
Confidence            65555544433   25899999999999765321110           01111100000000000   113578999999


Q ss_pred             HHHHHhCCCCCCceEec
Q 018503          265 IYEALSNPSYRGVINGT  281 (355)
Q Consensus       265 ~~~~~~~~~~~~~~~i~  281 (355)
                      ++.++.++.....|.++
T Consensus       226 i~~~~~~~~~~~~~~~g  242 (274)
T PRK05693        226 LLAAVQQSPRPRLVRLG  242 (274)
T ss_pred             HHHHHhCCCCCceEEec
Confidence            99999876543455554

>PRK08017 oxidoreductase; Provisional

Probab=99.70  E-value=1.4e-15  Score=131.63  Aligned_cols=203  Identities=15%  Similarity=0.093  Sum_probs=132.0

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhc--------CCCcEEEE
Q 018503           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCI--------QGSTAVVN  122 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~--------~~~d~vi~  122 (355)
                      ++|+||||+|+||+++++.|+++|++|++++|+.++.........  ....+|+.|.+++.+++        ..+|.+||
T Consensus         3 k~vlVtGasg~IG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~--~~~~~D~~~~~~~~~~~~~i~~~~~~~~~~ii~   80 (256)
T PRK08017          3 KSVLITGCSSGIGLEAALELKRRGYRVLAACRKPDDVARMNSLGF--TGILLDLDDPESVERAADEVIALTDNRLYGLFN   80 (256)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHhHHHHhCCC--eEEEeecCCHHHHHHHHHHHHHhcCCCCeEEEE
Confidence            589999999999999999999999999999998765443221110  13346777777655443        34689999


Q ss_pred             CCCCCCC---CCCChhhHHHHHHHhhhhHHHH----HHHHHcCCCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCChh-
Q 018503          123 LAGTPIG---TRWSSEIKKEIKESRIRVTSKV----VDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-  194 (355)
Q Consensus       123 ~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l----~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~~y-  194 (355)
                      ++|....   .....+.....++.|+.++.++    ++++.+  .+.+++|++||...  +..         .+....| 
T Consensus        81 ~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~--~~~~~iv~~ss~~~--~~~---------~~~~~~Y~  147 (256)
T PRK08017         81 NAGFGVYGPLSTISRQQMEQQFSTNFFGTHQLTMLLLPAMLP--HGEGRIVMTSSVMG--LIS---------TPGRGAYA  147 (256)
T ss_pred             CCCCCCccchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhh--cCCCEEEEEcCccc--ccC---------CCCccHHH
Confidence            9986422   1224455677889999987775    455555  56678999998644  211         1223457 


Q ss_pred             HHHHHHHHHHHHh---ccCCCCeEEEEEecEEEeCCCCcccchHHHHHHHhCCCC-CCCCcceecccHHHHHHHHHHHHh
Q 018503          195 LAEVCREWEGTAL---KVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPL-GSGQQWFSWIHLDDIVNLIYEALS  270 (355)
Q Consensus       195 ~~k~~~~~~~~~~---~~~~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~v~Dva~~~~~~~~  270 (355)
                      .+|...+.....+   ....++++++++|+.+..+.......      .....++ ..+...+.+++.+|+|+++..++.
T Consensus       148 ~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~d~a~~~~~~~~  221 (256)
T PRK08017        148 ASKYALEAWSDALRMELRHSGIKVSLIEPGPIRTRFTDNVNQ------TQSDKPVENPGIAARFTLGPEAVVPKLRHALE  221 (256)
T ss_pred             HHHHHHHHHHHHHHHHHhhcCCEEEEEeCCCcccchhhcccc------hhhccchhhhHHHhhcCCCHHHHHHHHHHHHh
Confidence            7776666544322   23458999999998775542111000      0000111 112223457999999999999998


Q ss_pred             CCCC
Q 018503          271 NPSY  274 (355)
Q Consensus       271 ~~~~  274 (355)
                      ++..
T Consensus       222 ~~~~  225 (256)
T PRK08017        222 SPKP  225 (256)
T ss_pred             CCCC
Confidence            7753

>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated

Probab=99.70  E-value=1.6e-15  Score=131.18  Aligned_cols=218  Identities=15%  Similarity=0.089  Sum_probs=144.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCC----CCCCccCCCeeecCCcchhhhcC-------CC
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP----GKKTRFFPGVMIAEEPQWRDCIQ-------GS  117 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~~d~~~~~~~~~~~~-------~~  117 (355)
                      ++++|+||||+|+||++++++|.++|++|++++|+.+.......    .........+|+.+.+++.++++       ++
T Consensus        10 ~~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~   89 (255)
T PRK06113         10 DGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFALSKLGKV   89 (255)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            45799999999999999999999999999999997655432211    00001133578888887766543       57


Q ss_pred             cEEEECCCCCCC--CCCChhhHHHHHHHhhhhHHHHHHHHHcC--CCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCCh
Q 018503          118 TAVVNLAGTPIG--TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGND  193 (355)
Q Consensus       118 d~vi~~a~~~~~--~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~~  193 (355)
                      |++||+||....  .....+.....+++|+.++..+++++...  ..+..++|++||...  ..         ..+....
T Consensus        90 d~li~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~--~~---------~~~~~~~  158 (255)
T PRK06113         90 DILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAA--EN---------KNINMTS  158 (255)
T ss_pred             CEEEECCCCCCCCCCCCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCcEEEEEecccc--cC---------CCCCcch
Confidence            999999996432  22345666778999999999999887531  134458999999765  21         1123345


Q ss_pred             h-HHHHHHHHHHHHhcc---CCCCeEEEEEecEEEeCCCCcccchHHHH--HHHhCCCCCCCCcceecccHHHHHHHHHH
Q 018503          194 Y-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALAKMIPLF--MMFAGGPLGSGQQWFSWIHLDDIVNLIYE  267 (355)
Q Consensus       194 y-~~k~~~~~~~~~~~~---~~~~~~~i~Rp~~i~G~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~i~v~Dva~~~~~  267 (355)
                      | .+|...+.+...+..   ..+++++++.||.+..+.....  ..+..  ......+      ...+...+|+++++..
T Consensus       159 Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pg~~~t~~~~~~--~~~~~~~~~~~~~~------~~~~~~~~d~a~~~~~  230 (255)
T PRK06113        159 YASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSV--ITPEIEQKMLQHTP------IRRLGQPQDIANAALF  230 (255)
T ss_pred             hHHHHHHHHHHHHHHHHHhhhhCeEEEEEecccccccccccc--cCHHHHHHHHhcCC------CCCCcCHHHHHHHHHH
Confidence            7 777776666655443   2479999999998876532211  11111  1111111      1236789999999999


Q ss_pred             HHhCCC---CCCceEecCCCc
Q 018503          268 ALSNPS---YRGVINGTAPNP  285 (355)
Q Consensus       268 ~~~~~~---~~~~~~i~~~~~  285 (355)
                      ++....   .+..+++.++..
T Consensus       231 l~~~~~~~~~G~~i~~~gg~~  251 (255)
T PRK06113        231 LCSPAASWVSGQILTVSGGGV  251 (255)
T ss_pred             HcCccccCccCCEEEECCCcc
Confidence            997543   344778877753

>PRK08213 gluconate 5-dehydrogenase; Provisional

Probab=99.69  E-value=1.6e-15  Score=131.59  Aligned_cols=218  Identities=17%  Similarity=0.112  Sum_probs=141.9

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccC----CCCCCccCCCeeecCCcchhhhcC-------CCc
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIF----PGKKTRFFPGVMIAEEPQWRDCIQ-------GST  118 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~~~~~~~~~~~d~~~~~~~~~~~~-------~~d  118 (355)
                      .++||||||+|+||.++++.|+++|++|++++|+.++.....    ..........+|+.|++++.++++       .+|
T Consensus        12 ~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d~~~i~~~~~~~~~~~~~id   91 (259)
T PRK08213         12 GKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEALGIDALWIAADVADEADIERLAEETLERFGHVD   91 (259)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCCCC
Confidence            478999999999999999999999999999999876533221    110001134578888888865553       589


Q ss_pred             EEEECCCCCCC---CCCChhhHHHHHHHhhhhHHHHHHHHHcC---CCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCC
Q 018503          119 AVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES---PEGVRPSVLVSATALGYYGTSETEVFDESSPSGN  192 (355)
Q Consensus       119 ~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~~~~---~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~  192 (355)
                      +|||+||....   .....+.....++.|+.++.++++++...   ..+.+++|++||.... ++...      ..+...
T Consensus        92 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~~~~~~~~v~~sS~~~~-~~~~~------~~~~~~  164 (259)
T PRK08213         92 ILVNNAGATWGAPAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMIPRGYGRIINVASVAGL-GGNPP------EVMDTI  164 (259)
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHHhcCCeEEEEECChhhc-cCCCc------cccCcc
Confidence            99999986422   22345566788899999999999977541   1255689999997651 22211      112335


Q ss_pred             hh-HHHHHHHHHHHHhcc---CCCCeEEEEEecEEEeCCCCcccchHHHH--HHHhCCCCCCCCcceecccHHHHHHHHH
Q 018503          193 DY-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALAKMIPLF--MMFAGGPLGSGQQWFSWIHLDDIVNLIY  266 (355)
Q Consensus       193 ~y-~~k~~~~~~~~~~~~---~~~~~~~i~Rp~~i~G~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~i~v~Dva~~~~  266 (355)
                      .| .+|...+.+...+..   ..++++.+++|+.+-.+....   ..+.+  ......++      ..+...+|+|.++.
T Consensus       165 ~Y~~sKa~~~~~~~~~a~~~~~~gi~v~~v~Pg~~~t~~~~~---~~~~~~~~~~~~~~~------~~~~~~~~va~~~~  235 (259)
T PRK08213        165 AYNTSKGAVINFTRALAAEWGPHGIRVNAIAPGFFPTKMTRG---TLERLGEDLLAHTPL------GRLGDDEDLKGAAL  235 (259)
T ss_pred             hHHHHHHHHHHHHHHHHHHhcccCEEEEEEecCcCCCcchhh---hhHHHHHHHHhcCCC------CCCcCHHHHHHHHH
Confidence            67 777776666555443   348999999999886653221   11111  11112221      12457899999999


Q ss_pred             HHHhCCC---CCCceEecCC
Q 018503          267 EALSNPS---YRGVINGTAP  283 (355)
Q Consensus       267 ~~~~~~~---~~~~~~i~~~  283 (355)
                      .++....   .+..+++.++
T Consensus       236 ~l~~~~~~~~~G~~~~~~~~  255 (259)
T PRK08213        236 LLASDASKHITGQILAVDGG  255 (259)
T ss_pred             HHhCccccCccCCEEEECCC
Confidence            8887543   2335666554

>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase

Probab=99.69  E-value=8.9e-16  Score=131.47  Aligned_cols=213  Identities=14%  Similarity=0.111  Sum_probs=137.1

Q ss_pred             EEEEcCCchHHHHHHHHHHhCCCeEEEEecCCc-hhhcc----CCCCCCccCCCeeecCCcchhhhcC-------CCcEE
Q 018503           53 VSVTGATGFIGRRLVQRLQADNHQVRVLTRSRS-KAELI----FPGKKTRFFPGVMIAEEPQWRDCIQ-------GSTAV  120 (355)
Q Consensus        53 IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~-~~~~~----~~~~~~~~~~~~d~~~~~~~~~~~~-------~~d~v  120 (355)
                      |+|||++|+||++++++|+++|++|++++|+.. .....    .....+.....+|+.|.+++.++++       .+|+|
T Consensus         1 vlItG~~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v   80 (239)
T TIGR01830         1 ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKAYGVKALGVVCDVSDREDVKAVVEEIEEELGPIDIL   80 (239)
T ss_pred             CEEECCCcHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            589999999999999999999999999999762 21111    1111011134578888887776653       47999


Q ss_pred             EECCCCCCC---CCCChhhHHHHHHHhhhhHHHHHHHHHcC--CCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCChh-
Q 018503          121 VNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-  194 (355)
Q Consensus       121 i~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~~y-  194 (355)
                      ||++|....   .....+.++..++.|+.++..+++++...  ..+.++++++||.+.. ||.          +....| 
T Consensus        81 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~-~g~----------~~~~~y~  149 (239)
T TIGR01830        81 VNNAGITRDNLLMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMIKQRSGRIINISSVVGL-MGN----------AGQANYA  149 (239)
T ss_pred             EECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEECCcccc-CCC----------CCCchhH
Confidence            999997432   23345667888999999999998887541  1346689999996542 442          223456 


Q ss_pred             HHHHHHHHHHHHhcc---CCCCeEEEEEecEEEeCCCCcccchHHHHHHHhCCCCCCCCcceecccHHHHHHHHHHHHhC
Q 018503          195 LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSN  271 (355)
Q Consensus       195 ~~k~~~~~~~~~~~~---~~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~  271 (355)
                      .+|...+.+...+..   ..|+.+++++|+.+.++.......... .......+      ...+.+++|+|++++.++..
T Consensus       150 ~~k~a~~~~~~~l~~~~~~~g~~~~~i~pg~~~~~~~~~~~~~~~-~~~~~~~~------~~~~~~~~~~a~~~~~~~~~  222 (239)
T TIGR01830       150 ASKAGVIGFTKSLAKELASRNITVNAVAPGFIDTDMTDKLSEKVK-KKILSQIP------LGRFGTPEEVANAVAFLASD  222 (239)
T ss_pred             HHHHHHHHHHHHHHHHHhhcCeEEEEEEECCCCChhhhhcChHHH-HHHHhcCC------cCCCcCHHHHHHHHHHHhCc
Confidence            666554444333322   258999999999886653222111110 01111111      12367899999999998865


Q ss_pred             CC---CCCceEecCC
Q 018503          272 PS---YRGVINGTAP  283 (355)
Q Consensus       272 ~~---~~~~~~i~~~  283 (355)
                      +.   .+.+|++.++
T Consensus       223 ~~~~~~g~~~~~~~g  237 (239)
T TIGR01830       223 EASYITGQVIHVDGG  237 (239)
T ss_pred             ccCCcCCCEEEeCCC
Confidence            32   3458888654

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.

>PRK07063 short chain dehydrogenase; Provisional

Probab=99.69  E-value=5.5e-16  Score=134.58  Aligned_cols=219  Identities=14%  Similarity=0.048  Sum_probs=141.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCC------CCCccCCCeeecCCcchhhhcC-------
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG------KKTRFFPGVMIAEEPQWRDCIQ-------  115 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~------~~~~~~~~~d~~~~~~~~~~~~-------  115 (355)
                      ..++++||||+|.||+++++.|+++|++|++++|+.+........      ........+|+.|++++.++++       
T Consensus         6 ~~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g   85 (260)
T PRK07063          6 AGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAEEAFG   85 (260)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            357899999999999999999999999999999987654332111      0001133468888887776654       


Q ss_pred             CCcEEEECCCCCCC---CCCChhhHHHHHHHhhhhHHHHHHHHHcC--CCCCCcEEEEeeeeeeeeCCCCCccccCCCCC
Q 018503          116 GSTAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPS  190 (355)
Q Consensus       116 ~~d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~  190 (355)
                      .+|++||+||....   .....+.+...+++|+.++..+++++...  ..+.+++|++||...  +..         .+.
T Consensus        86 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~--~~~---------~~~  154 (260)
T PRK07063         86 PLDVLVNNAGINVFADPLAMTDEDWRRCFAVDLDGAWNGCRAVLPGMVERGRGSIVNIASTHA--FKI---------IPG  154 (260)
T ss_pred             CCcEEEECCCcCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhhCCeEEEEECChhh--ccC---------CCC
Confidence            68999999996422   22345667888999999998888876431  134568999999755  221         122


Q ss_pred             CChh-HHHHHHHHHHHHhcc---CCCCeEEEEEecEEEeCCCCcc-c---chHHHH-HHHhCCCCCCCCcceecccHHHH
Q 018503          191 GNDY-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGAL-A---KMIPLF-MMFAGGPLGSGQQWFSWIHLDDI  261 (355)
Q Consensus       191 ~~~y-~~k~~~~~~~~~~~~---~~~~~~~i~Rp~~i~G~~~~~~-~---~~~~~~-~~~~~~~~~~~~~~~~~i~v~Dv  261 (355)
                      ...| .+|...+.+.+.+..   ..|+++..++||.+-.+..... .   ...... ......+.      ..+...+|+
T Consensus       155 ~~~Y~~sKaa~~~~~~~la~el~~~gIrvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~------~r~~~~~~v  228 (260)
T PRK07063        155 CFPYPVAKHGLLGLTRALGIEYAARNVRVNAIAPGYIETQLTEDWWNAQPDPAAARAETLALQPM------KRIGRPEEV  228 (260)
T ss_pred             chHHHHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccChhhhhhhhccCChHHHHHHHHhcCCC------CCCCCHHHH
Confidence            3457 677766665555443   2489999999998866532110 0   000001 11111111      125678999


Q ss_pred             HHHHHHHHhCCC---CCCceEecCCC
Q 018503          262 VNLIYEALSNPS---YRGVINGTAPN  284 (355)
Q Consensus       262 a~~~~~~~~~~~---~~~~~~i~~~~  284 (355)
                      |.+++.++....   .+..+.+.+|.
T Consensus       229 a~~~~fl~s~~~~~itG~~i~vdgg~  254 (260)
T PRK07063        229 AMTAVFLASDEAPFINATCITIDGGR  254 (260)
T ss_pred             HHHHHHHcCccccccCCcEEEECCCe
Confidence            999999997643   33355565554

>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]

Probab=99.69  E-value=7.7e-16  Score=129.75  Aligned_cols=204  Identities=15%  Similarity=0.079  Sum_probs=139.4

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCC-----CccCCCeeecCCcchhhhcC-------
Q 018503           48 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKK-----TRFFPGVMIAEEPQWRDCIQ-------  115 (355)
Q Consensus        48 ~~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-----~~~~~~~d~~~~~~~~~~~~-------  115 (355)
                      +++++++|||||+.||..++++|.++|++|+.+.|+.++...+.....     +.....+|+.+++++.++..       
T Consensus         4 ~~~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~~l~~~~~   83 (265)
T COG0300           4 MKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTGVEVEVIPADLSDPEALERLEDELKERGG   83 (265)
T ss_pred             CCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCChhHHHHHHHHHHhcCC
Confidence            455799999999999999999999999999999999997765543221     11133578888887776553       


Q ss_pred             CCcEEEECCCCCCC---CCCChhhHHHHHHHhhhhHHHHHHHHHc-C-CCCCCcEEEEeeeeeeeeCCCCCccccCCCCC
Q 018503          116 GSTAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINE-S-PEGVRPSVLVSATALGYYGTSETEVFDESSPS  190 (355)
Q Consensus       116 ~~d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~~~-~-~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~  190 (355)
                      .+|++|||||....   ...+.+...+.+++|+.+...|..++.. + ..+..++|.++|.+.  |-.         .|.
T Consensus        84 ~IdvLVNNAG~g~~g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~~~G~IiNI~S~ag--~~p---------~p~  152 (265)
T COG0300          84 PIDVLVNNAGFGTFGPFLELSLDEEEEMIQLNILALTRLTKAVLPGMVERGAGHIINIGSAAG--LIP---------TPY  152 (265)
T ss_pred             cccEEEECCCcCCccchhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechhh--cCC---------Ccc
Confidence            58999999998543   2344566678999999997777665432 1 146678999999876  321         233


Q ss_pred             CChh-HHHHHHHHHHHHhc---cCCCCeEEEEEecEEEeCCCCcccchHHHHHHHhCCCCCCCCcceecccHHHHHHHHH
Q 018503          191 GNDY-LAEVCREWEGTALK---VNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIY  266 (355)
Q Consensus       191 ~~~y-~~k~~~~~~~~~~~---~~~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~  266 (355)
                      ...| .+|.......+.++   ...|+.++.+.||.+..+....           .+.........+-++..+|+|+..+
T Consensus       153 ~avY~ATKa~v~~fSeaL~~EL~~~gV~V~~v~PG~~~T~f~~~-----------~~~~~~~~~~~~~~~~~~~va~~~~  221 (265)
T COG0300         153 MAVYSATKAFVLSFSEALREELKGTGVKVTAVCPGPTRTEFFDA-----------KGSDVYLLSPGELVLSPEDVAEAAL  221 (265)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEEecCccccccccc-----------cccccccccchhhccCHHHHHHHHH
Confidence            4566 66644332222222   3358999999999887653210           0000001111245789999999999


Q ss_pred             HHHhCCC
Q 018503          267 EALSNPS  273 (355)
Q Consensus       267 ~~~~~~~  273 (355)
                      ..+.+..
T Consensus       222 ~~l~~~k  228 (265)
T COG0300         222 KALEKGK  228 (265)
T ss_pred             HHHhcCC
Confidence            9999754

>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

Probab=99.69  E-value=1.5e-15  Score=130.63  Aligned_cols=217  Identities=15%  Similarity=0.114  Sum_probs=137.4

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCC-CCCccCCCeeecCCcchhhhc-------CCCcEEE
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-KKTRFFPGVMIAEEPQWRDCI-------QGSTAVV  121 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~-------~~~d~vi  121 (355)
                      .++++||||+|+||+++++.|+++|+.|+..+|+.++....... ........+|+.+.+++.+++       .++|+||
T Consensus         6 ~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi   85 (245)
T PRK12936          6 GRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAELGERVKIFPANLSDRDEVKALGQKAEADLEGVDILV   85 (245)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            46999999999999999999999999999888876554332111 000113347888888776654       3689999


Q ss_pred             ECCCCCCC---CCCChhhHHHHHHHhhhhHHHHHHHHHcC--CCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCChh-H
Q 018503          122 NLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-L  195 (355)
Q Consensus       122 ~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~~y-~  195 (355)
                      |+||....   .....+.+...+++|+.++..+++++...  ..+.+++|++||.... ++.          +....| .
T Consensus        86 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~-~~~----------~~~~~Y~~  154 (245)
T PRK12936         86 NNAGITKDGLFVRMSDEDWDSVLEVNLTATFRLTRELTHPMMRRRYGRIINITSVVGV-TGN----------PGQANYCA  154 (245)
T ss_pred             ECCCCCCCCccccCCHHHHHHHHhhccHHHHHHHHHHHHHHHHhCCCEEEEECCHHhC-cCC----------CCCcchHH
Confidence            99997432   12345667888999999998888876421  1355789999997542 332          122346 5


Q ss_pred             HHHHHHHHHHHhcc---CCCCeEEEEEecEEEeCCCCcccchHHHHHHHhCCCCCCCCcceecccHHHHHHHHHHHHhCC
Q 018503          196 AEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNP  272 (355)
Q Consensus       196 ~k~~~~~~~~~~~~---~~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~  272 (355)
                      +|.....+.+.+..   ..+++++.++|+.+..+.......... .......+      ...+...+|+++++..++...
T Consensus       155 sk~a~~~~~~~la~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~-~~~~~~~~------~~~~~~~~~ia~~~~~l~~~~  227 (245)
T PRK12936        155 SKAGMIGFSKSLAQEIATRNVTVNCVAPGFIESAMTGKLNDKQK-EAIMGAIP------MKRMGTGAEVASAVAYLASSE  227 (245)
T ss_pred             HHHHHHHHHHHHHHHhhHhCeEEEEEEECcCcCchhcccChHHH-HHHhcCCC------CCCCcCHHHHHHHHHHHcCcc
Confidence            55433333322221   248999999999876543221111100 00111111      123667999999999888654


Q ss_pred             C---CCCceEecCCC
Q 018503          273 S---YRGVINGTAPN  284 (355)
Q Consensus       273 ~---~~~~~~i~~~~  284 (355)
                      .   .+..+++.+|.
T Consensus       228 ~~~~~G~~~~~~~g~  242 (245)
T PRK12936        228 AAYVTGQTIHVNGGM  242 (245)
T ss_pred             ccCcCCCEEEECCCc
Confidence            3   24478887664

>PRK12743 oxidoreductase; Provisional

Probab=99.69  E-value=1.6e-15  Score=131.32  Aligned_cols=218  Identities=12%  Similarity=0.031  Sum_probs=138.8

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCch-hhccC----CCCCCccCCCeeecCCcchhhhcC-------CC
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSK-AELIF----PGKKTRFFPGVMIAEEPQWRDCIQ-------GS  117 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~-~~~~~----~~~~~~~~~~~d~~~~~~~~~~~~-------~~  117 (355)
                      +++|+||||+|+||++++++|+++|++|+++.++... .....    ..........+|+.+.+++.++++       .+
T Consensus         2 ~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   81 (256)
T PRK12743          2 AQVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSDLPEGAQALDKLIQRLGRI   81 (256)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            4689999999999999999999999999988765432 21111    111111134578888887765553       57


Q ss_pred             cEEEECCCCCCC---CCCChhhHHHHHHHhhhhHHHHHHHHHcC--C-CCCCcEEEEeeeeeeeeCCCCCccccCCCCCC
Q 018503          118 TAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--P-EGVRPSVLVSATALGYYGTSETEVFDESSPSG  191 (355)
Q Consensus       118 d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~-~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~  191 (355)
                      |+|||++|....   .....+.....+++|+.++..+++++...  . ...+++|++||...  ..         ..+..
T Consensus        82 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~--~~---------~~~~~  150 (256)
T PRK12743         82 DVLVNNAGAMTKAPFLDMDFDEWRKIFTVDVDGAFLCSQIAARHMVKQGQGGRIINITSVHE--HT---------PLPGA  150 (256)
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEEeeccc--cC---------CCCCc
Confidence            999999997532   12345667788999999999999877542  1 12358999998654  11         11234


Q ss_pred             Chh-HHHHHHHHHHHHhcc---CCCCeEEEEEecEEEeCCCCcccchHHHHHHHhCCCCCCCCcceecccHHHHHHHHHH
Q 018503          192 NDY-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYE  267 (355)
Q Consensus       192 ~~y-~~k~~~~~~~~~~~~---~~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~  267 (355)
                      ..| .+|...+.+...+..   ..+++++.++||.+.++.......-. ........+++      .+.+.+|+|.++..
T Consensus       151 ~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~Pg~~~t~~~~~~~~~~-~~~~~~~~~~~------~~~~~~dva~~~~~  223 (256)
T PRK12743        151 SAYTAAKHALGGLTKAMALELVEHGILVNAVAPGAIATPMNGMDDSDV-KPDSRPGIPLG------RPGDTHEIASLVAW  223 (256)
T ss_pred             chhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCccCccccccChHH-HHHHHhcCCCC------CCCCHHHHHHHHHH
Confidence            567 667665555444333   24899999999999987532211100 00111111211      24688999999999


Q ss_pred             HHhCCC---CCCceEecCCCc
Q 018503          268 ALSNPS---YRGVINGTAPNP  285 (355)
Q Consensus       268 ~~~~~~---~~~~~~i~~~~~  285 (355)
                      ++....   .+..+.+.++..
T Consensus       224 l~~~~~~~~~G~~~~~dgg~~  244 (256)
T PRK12743        224 LCSEGASYTTGQSLIVDGGFM  244 (256)
T ss_pred             HhCccccCcCCcEEEECCCcc
Confidence            987543   234666666643

>PRK07814 short chain dehydrogenase; Provisional

Probab=99.69  E-value=1.5e-15  Score=132.05  Aligned_cols=219  Identities=13%  Similarity=0.034  Sum_probs=140.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCC----CCCccCCCeeecCCcchhhhcC-------CC
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG----KKTRFFPGVMIAEEPQWRDCIQ-------GS  117 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~----~~~~~~~~~d~~~~~~~~~~~~-------~~  117 (355)
                      ..++++||||+|+||.+++++|+++|++|++++|+.++.......    ........+|+.+++++.++++       ++
T Consensus         9 ~~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   88 (263)
T PRK07814          9 DDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAHPEATAGLAGQAVEAFGRL   88 (263)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            357899999999999999999999999999999987654322110    0000133478888887766553       68


Q ss_pred             cEEEECCCCCCC---CCCChhhHHHHHHHhhhhHHHHHHHHHcC--C-CCCCcEEEEeeeeeeeeCCCCCccccCCCCCC
Q 018503          118 TAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--P-EGVRPSVLVSATALGYYGTSETEVFDESSPSG  191 (355)
Q Consensus       118 d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~-~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~  191 (355)
                      |+|||+||....   .....+.....+++|+.++.++.+++...  . .+.+++|++||.... ++          .+..
T Consensus        89 d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~sS~~~~-~~----------~~~~  157 (263)
T PRK07814         89 DIVVNNVGGTMPNPLLSTSTKDLADAFTFNVATAHALTVAAVPLMLEHSGGGSVINISSTMGR-LA----------GRGF  157 (263)
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHhhcHHHHHHHHHHHHHHHhhcCCeEEEEEcccccc-CC----------CCCC
Confidence            999999986322   22345667888999999999999988631  0 245689999986441 11          1234


Q ss_pred             Chh-HHHHHHHHHHHHhccC--CCCeEEEEEecEEEeCCCCcccchHHHHHHHhCCCCCCCCcceecccHHHHHHHHHHH
Q 018503          192 NDY-LAEVCREWEGTALKVN--KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEA  268 (355)
Q Consensus       192 ~~y-~~k~~~~~~~~~~~~~--~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~  268 (355)
                      ..| .+|...+.....+..+  .+++++.++|+.+..+................+.     .....+...+|+|++++.+
T Consensus       158 ~~Y~~sK~a~~~~~~~~~~e~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~va~~~~~l  232 (263)
T PRK07814        158 AAYGTAKAALAHYTRLAALDLCPRIRVNAIAPGSILTSALEVVAANDELRAPMEKA-----TPLRRLGDPEDIAAAAVYL  232 (263)
T ss_pred             chhHHHHHHHHHHHHHHHHHHCCCceEEEEEeCCCcCchhhhccCCHHHHHHHHhc-----CCCCCCcCHHHHHHHHHHH
Confidence            567 7777666655554443  2588889999988655322110000111111111     0112356889999999999


Q ss_pred             HhCCC---CCCceEecCC
Q 018503          269 LSNPS---YRGVINGTAP  283 (355)
Q Consensus       269 ~~~~~---~~~~~~i~~~  283 (355)
                      +....   .+..+.+.++
T Consensus       233 ~~~~~~~~~g~~~~~~~~  250 (263)
T PRK07814        233 ASPAGSYLTGKTLEVDGG  250 (263)
T ss_pred             cCccccCcCCCEEEECCC
Confidence            87532   3335555544

>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.69  E-value=7.2e-16  Score=132.71  Aligned_cols=216  Identities=13%  Similarity=0.043  Sum_probs=137.6

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCCeEEEE-ecCCchhhccCCC----CCCccCCCeeecCCcchhhhcC-------CC
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVL-TRSRSKAELIFPG----KKTRFFPGVMIAEEPQWRDCIQ-------GS  117 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~-~r~~~~~~~~~~~----~~~~~~~~~d~~~~~~~~~~~~-------~~  117 (355)
                      +++|+|+||+|+||.+++++|++.|++|+++ +|+..........    ........+|+.|++++.++++       ++
T Consensus         5 ~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   84 (247)
T PRK05565          5 GKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSSEEDVENLVEQIVEKFGKI   84 (247)
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence            4689999999999999999999999999998 8876543221110    0001134568888887766654       68


Q ss_pred             cEEEECCCCCCC---CCCChhhHHHHHHHhhhhHHHHHHHHHcC--CCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCC
Q 018503          118 TAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGN  192 (355)
Q Consensus       118 d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~  192 (355)
                      |+|||++|....   .....+..+..+++|+.++.++++++...  ..+.+++|++||.... ++.          +...
T Consensus        85 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~-~~~----------~~~~  153 (247)
T PRK05565         85 DILVNNAGISNFGLVTDMTDEEWDRVIDVNLTGVMLLTRYALPYMIKRKSGVIVNISSIWGL-IGA----------SCEV  153 (247)
T ss_pred             CEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCHhhc-cCC----------CCcc
Confidence            999999997522   12345666788999999988887776541  1346679999987652 321          1233


Q ss_pred             hh-HHHHHHHHHHHHhcc---CCCCeEEEEEecEEEeCCCCcccchHHHHHHHhCCCCCCCCcceecccHHHHHHHHHHH
Q 018503          193 DY-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEA  268 (355)
Q Consensus       193 ~y-~~k~~~~~~~~~~~~---~~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~  268 (355)
                      .| .+|...+...+.+..   ..|++++.++|+.+..+......... .......      .....+...+|++++++.+
T Consensus       154 ~y~~sK~a~~~~~~~~~~~~~~~gi~~~~v~pg~v~t~~~~~~~~~~-~~~~~~~------~~~~~~~~~~~va~~~~~l  226 (247)
T PRK05565        154 LYSASKGAVNAFTKALAKELAPSGIRVNAVAPGAIDTEMWSSFSEED-KEGLAEE------IPLGRLGKPEEIAKVVLFL  226 (247)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHcCeEEEEEEECCccCccccccChHH-HHHHHhc------CCCCCCCCHHHHHHHHHHH
Confidence            46 555443333322222   35899999999998765432211100 0011111      1112367899999999999


Q ss_pred             HhCCC---CCCceEecCC
Q 018503          269 LSNPS---YRGVINGTAP  283 (355)
Q Consensus       269 ~~~~~---~~~~~~i~~~  283 (355)
                      +....   .+..+++.++
T Consensus       227 ~~~~~~~~~g~~~~~~~~  244 (247)
T PRK05565        227 ASDDASYITGQIITVDGG  244 (247)
T ss_pred             cCCccCCccCcEEEecCC
Confidence            97644   3335666554

>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.69  E-value=2e-15  Score=130.50  Aligned_cols=216  Identities=14%  Similarity=0.091  Sum_probs=138.8

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCC-chhhccCCC-CCCccCCCeeecCCcchhhhcC-------C-CcE
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSR-SKAELIFPG-KKTRFFPGVMIAEEPQWRDCIQ-------G-STA  119 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~-~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~-------~-~d~  119 (355)
                      .++|+||||+|+||+++++.|++.|++|+++.++. .....+... ........+|+.|++++.++++       . +|+
T Consensus         5 ~k~ilItGas~gIG~~la~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~id~   84 (253)
T PRK08642          5 EQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALADELGDRAIALQADVTDREQVQAMFATATEHFGKPITT   84 (253)
T ss_pred             CCEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHhCCCCeE
Confidence            36899999999999999999999999998876543 322211110 0001134578888887776664       2 899


Q ss_pred             EEECCCCCC---------CCCCChhhHHHHHHHhhhhHHHHHHHHHcC--CCCCCcEEEEeeeeeeeeCCCCCccccCCC
Q 018503          120 VVNLAGTPI---------GTRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESS  188 (355)
Q Consensus       120 vi~~a~~~~---------~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~  188 (355)
                      +||+|+...         ......+.....+++|+.++..+++++...  ..+..++|++||...  ..         ..
T Consensus        85 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~--~~---------~~  153 (253)
T PRK08642         85 VVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGALNTIQAALPGMREQGFGRIINIGTNLF--QN---------PV  153 (253)
T ss_pred             EEECCCccccccccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHhcCCeEEEEECCccc--cC---------CC
Confidence            999998521         112334566788999999999999887531  134568999988643  11         11


Q ss_pred             CCCChh-HHHHHHHHHHHHhccC---CCCeEEEEEecEEEeCCCCcccchHHHHHHH-hCCCCCCCCcceecccHHHHHH
Q 018503          189 PSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMF-AGGPLGSGQQWFSWIHLDDIVN  263 (355)
Q Consensus       189 ~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~v~Dva~  263 (355)
                      .+.+.| .+|...+.+...+..+   .++++..++||.+..+....... -...... ...+      ...+.+.+|+|+
T Consensus       154 ~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~i~pG~v~t~~~~~~~~-~~~~~~~~~~~~------~~~~~~~~~va~  226 (253)
T PRK08642        154 VPYHDYTTAKAALLGLTRNLAAELGPYGITVNMVSGGLLRTTDASAATP-DEVFDLIAATTP------LRKVTTPQEFAD  226 (253)
T ss_pred             CCccchHHHHHHHHHHHHHHHHHhCccCeEEEEEeecccCCchhhccCC-HHHHHHHHhcCC------cCCCCCHHHHHH
Confidence            233467 7887777776665543   47999999999887653211100 0111111 1111      124789999999


Q ss_pred             HHHHHHhCCC---CCCceEecCC
Q 018503          264 LIYEALSNPS---YRGVINGTAP  283 (355)
Q Consensus       264 ~~~~~~~~~~---~~~~~~i~~~  283 (355)
                      ++..++....   .+..+.+.+|
T Consensus       227 ~~~~l~~~~~~~~~G~~~~vdgg  249 (253)
T PRK08642        227 AVLFFASPWARAVTGQNLVVDGG  249 (253)
T ss_pred             HHHHHcCchhcCccCCEEEeCCC
Confidence            9999998543   3446666655

>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.69  E-value=2.1e-15  Score=128.81  Aligned_cols=211  Identities=15%  Similarity=0.079  Sum_probs=135.2

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCC-cchhhhcCCCcEEEECCCCCC
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEE-PQWRDCIQGSTAVVNLAGTPI  128 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~-~~~~~~~~~~d~vi~~a~~~~  128 (355)
                      .++++||||+|+||+++++.|+++|++|++++|+......  ...   ....+|+.++ +.+.+.+..+|++||+||...
T Consensus         5 ~k~~lVtGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~--~~~---~~~~~D~~~~~~~~~~~~~~id~lv~~ag~~~   79 (235)
T PRK06550          5 TKTVLITGAASGIGLAQARAFLAQGAQVYGVDKQDKPDLS--GNF---HFLQLDLSDDLEPLFDWVPSVDILCNTAGILD   79 (235)
T ss_pred             CCEEEEcCCCchHHHHHHHHHHHCCCEEEEEeCCcccccC--CcE---EEEECChHHHHHHHHHhhCCCCEEEECCCCCC
Confidence            4689999999999999999999999999999997643211  100   1334566665 333344557899999998531


Q ss_pred             ----CCCCChhhHHHHHHHhhhhHHHHHHHHHcC--CCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCChh-HHHHHHH
Q 018503          129 ----GTRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-LAEVCRE  201 (355)
Q Consensus       129 ----~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~~y-~~k~~~~  201 (355)
                          ......+.....+++|+.++.++++++...  ..+.+++|++||...  +...         +....| .+|...+
T Consensus        80 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~--~~~~---------~~~~~Y~~sK~a~~  148 (235)
T PRK06550         80 DYKPLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLERKSGIIINMCSIAS--FVAG---------GGGAAYTASKHALA  148 (235)
T ss_pred             CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhh--ccCC---------CCCcccHHHHHHHH
Confidence                123456677888999999999998877531  134568999998765  2211         122346 5665544


Q ss_pred             HHHHHhcc---CCCCeEEEEEecEEEeCCCCc-ccchHHHHH-HHhCCCCCCCCcceecccHHHHHHHHHHHHhCCC---
Q 018503          202 WEGTALKV---NKDVRLALIRIGIVLGKDGGA-LAKMIPLFM-MFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPS---  273 (355)
Q Consensus       202 ~~~~~~~~---~~~~~~~i~Rp~~i~G~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~---  273 (355)
                      .....+..   ..|+++++++|+.+.++.... +.. ..... .....+      ...+...+|+|++++.++....   
T Consensus       149 ~~~~~la~~~~~~gi~v~~v~pg~v~t~~~~~~~~~-~~~~~~~~~~~~------~~~~~~~~~~a~~~~~l~s~~~~~~  221 (235)
T PRK06550        149 GFTKQLALDYAKDGIQVFGIAPGAVKTPMTAADFEP-GGLADWVARETP------IKRWAEPEEVAELTLFLASGKADYM  221 (235)
T ss_pred             HHHHHHHHHhhhcCeEEEEEeeCCccCcccccccCc-hHHHHHHhccCC------cCCCCCHHHHHHHHHHHcChhhccC
Confidence            44443333   248999999999998774321 110 00111 111111      2236788999999999997543   


Q ss_pred             CCCceEecCC
Q 018503          274 YRGVINGTAP  283 (355)
Q Consensus       274 ~~~~~~i~~~  283 (355)
                      .+..+.+.+|
T Consensus       222 ~g~~~~~~gg  231 (235)
T PRK06550        222 QGTIVPIDGG  231 (235)
T ss_pred             CCcEEEECCc
Confidence            3335556554

>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.69  E-value=2.4e-15  Score=130.18  Aligned_cols=217  Identities=16%  Similarity=0.109  Sum_probs=139.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchh-hccCCCCCCccCCCeeecCCcchhhhcC-------CCcEE
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKA-ELIFPGKKTRFFPGVMIAEEPQWRDCIQ-------GSTAV  120 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~d~~~~~~~~~~~~-------~~d~v  120 (355)
                      ..|+++||||+|.||++++++|++.|++|+++.|+.... ..+....  .....+|+.|++++.++++       ++|+|
T Consensus         6 ~~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~~--~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   83 (255)
T PRK06463          6 KGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENEAKELREKG--VFTIKCDVGNRDQVKKSKEVVEKEFGRVDVL   83 (255)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHhCC--CeEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            347899999999999999999999999999887755332 2221110  1144578999888776653       58999


Q ss_pred             EECCCCCCC---CCCChhhHHHHHHHhhhhHHHHH----HHHHcCCCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCCh
Q 018503          121 VNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVV----DLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGND  193 (355)
Q Consensus       121 i~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~----~a~~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~~  193 (355)
                      ||+||....   .....+.+...+++|+.++..+.    +.+++  .+.+++|++||...  ++..        .+....
T Consensus        84 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~--~~~g~iv~isS~~~--~~~~--------~~~~~~  151 (255)
T PRK06463         84 VNNAGIMYLMPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKL--SKNGAIVNIASNAG--IGTA--------AEGTTF  151 (255)
T ss_pred             EECCCcCCCCChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHh--cCCcEEEEEcCHHh--CCCC--------CCCccH
Confidence            999987432   22345667788999999965554    44443  45678999999766  4311        112345


Q ss_pred             h-HHHHHHHHHHHHhccC---CCCeEEEEEecEEEeCCCCc--ccchH-HHHHHHhCCCCCCCCcceecccHHHHHHHHH
Q 018503          194 Y-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGA--LAKMI-PLFMMFAGGPLGSGQQWFSWIHLDDIVNLIY  266 (355)
Q Consensus       194 y-~~k~~~~~~~~~~~~~---~~~~~~i~Rp~~i~G~~~~~--~~~~~-~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~  266 (355)
                      | .+|...+.+.+.+..+   .+++++.++||.+-.+....  ..... .........     .....+...+|+|++++
T Consensus       152 Y~asKaa~~~~~~~la~e~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~va~~~~  226 (255)
T PRK06463        152 YAITKAGIIILTRRLAFELGKYGIRVNAVAPGWVETDMTLSGKSQEEAEKLRELFRNK-----TVLKTTGKPEDIANIVL  226 (255)
T ss_pred             hHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCCCCchhhcccCccchHHHHHHHHhC-----CCcCCCcCHHHHHHHHH
Confidence            7 7777666666555443   48999999999885542110  00000 111111111     11223578999999999


Q ss_pred             HHHhCCC---CCCceEecCCC
Q 018503          267 EALSNPS---YRGVINGTAPN  284 (355)
Q Consensus       267 ~~~~~~~---~~~~~~i~~~~  284 (355)
                      .++....   .+..+.+.+|.
T Consensus       227 ~l~s~~~~~~~G~~~~~dgg~  247 (255)
T PRK06463        227 FLASDDARYITGQVIVADGGR  247 (255)
T ss_pred             HHcChhhcCCCCCEEEECCCe
Confidence            9997644   34467776664

>PRK05866 short chain dehydrogenase; Provisional

Probab=99.69  E-value=8.6e-16  Score=135.41  Aligned_cols=198  Identities=11%  Similarity=0.075  Sum_probs=132.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCC----CCCccCCCeeecCCcchhhhcC-------CC
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG----KKTRFFPGVMIAEEPQWRDCIQ-------GS  117 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~----~~~~~~~~~d~~~~~~~~~~~~-------~~  117 (355)
                      ..++|+||||+|+||+++++.|+++|++|++++|+.+........    ........+|+.|.+++.++++       ++
T Consensus        39 ~~k~vlItGasggIG~~la~~La~~G~~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~i  118 (293)
T PRK05866         39 TGKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRAGGDAMAVPCDLSDLDAVDALVADVEKRIGGV  118 (293)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            347899999999999999999999999999999987654322110    1101133578888888777665       78


Q ss_pred             cEEEECCCCCCCCCC-----ChhhHHHHHHHhhhhHHHHHHHHHcC--CCCCCcEEEEeeeeeeeeCCCCCccccCCCCC
Q 018503          118 TAVVNLAGTPIGTRW-----SSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPS  190 (355)
Q Consensus       118 d~vi~~a~~~~~~~~-----~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~  190 (355)
                      |++|||||......+     ..+.....+++|+.+...+++++...  ..+..++|++||.++  ++.        ..+.
T Consensus       119 d~li~~AG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~--~~~--------~~p~  188 (293)
T PRK05866        119 DILINNAGRSIRRPLAESLDRWHDVERTMVLNYYAPLRLIRGLAPGMLERGDGHIINVATWGV--LSE--------ASPL  188 (293)
T ss_pred             CEEEECCCCCCCcchhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhh--cCC--------CCCC
Confidence            999999997533221     12345678899999988877765321  146678999998655  321        1123


Q ss_pred             CChh-HHHHHHHHHHHHhcc---CCCCeEEEEEecEEEeCCCCcccchHHHHHHHhCCCCCCCCcceecccHHHHHHHHH
Q 018503          191 GNDY-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIY  266 (355)
Q Consensus       191 ~~~y-~~k~~~~~~~~~~~~---~~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~  266 (355)
                      ...| .+|...+.+.+.+..   ..+++++.++||.+-.+......            . ..   ....+..+++|+.++
T Consensus       189 ~~~Y~asKaal~~l~~~la~e~~~~gI~v~~v~pg~v~T~~~~~~~------------~-~~---~~~~~~pe~vA~~~~  252 (293)
T PRK05866        189 FSVYNASKAALSAVSRVIETEWGDRGVHSTTLYYPLVATPMIAPTK------------A-YD---GLPALTADEAAEWMV  252 (293)
T ss_pred             cchHHHHHHHHHHHHHHHHHHhcccCcEEEEEEcCcccCccccccc------------c-cc---CCCCCCHHHHHHHHH
Confidence            3567 777766655544433   34899999999977655321100            0 00   112478999999999


Q ss_pred             HHHhCC
Q 018503          267 EALSNP  272 (355)
Q Consensus       267 ~~~~~~  272 (355)
                      .++.++
T Consensus       253 ~~~~~~  258 (293)
T PRK05866        253 TAARTR  258 (293)
T ss_pred             HHHhcC
Confidence            999865

>PRK06124 gluconate 5-dehydrogenase; Provisional

Probab=99.69  E-value=2.4e-15  Score=130.28  Aligned_cols=216  Identities=16%  Similarity=0.118  Sum_probs=139.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCC----CCCCccCCCeeecCCcchhhhcC-------CC
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP----GKKTRFFPGVMIAEEPQWRDCIQ-------GS  117 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~~d~~~~~~~~~~~~-------~~  117 (355)
                      ++++|+||||+|+||++++++|+++|++|++++|+.+.......    .........+|+.+++++.++++       .+
T Consensus        10 ~~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   89 (256)
T PRK06124         10 AGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAAGGAAEALAFDIADEEAVAAAFARIDAEHGRL   89 (256)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcCCC
Confidence            45799999999999999999999999999999998754332211    11111134568888887766553       46


Q ss_pred             cEEEECCCCCCC---CCCChhhHHHHHHHhhhhHHHHHHHHHcC--CCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCC
Q 018503          118 TAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGN  192 (355)
Q Consensus       118 d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~  192 (355)
                      |++||++|....   .+...+.++..+++|+.++..+.+++...  ..+.+++|++||...  +..         .+...
T Consensus        90 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~--~~~---------~~~~~  158 (256)
T PRK06124         90 DILVNNVGARDRRPLAELDDAAIRALLETDLVAPILLSRLAAQRMKRQGYGRIIAITSIAG--QVA---------RAGDA  158 (256)
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEeechh--ccC---------CCCcc
Confidence            999999997432   23345667788999999988888665331  145678999998765  211         11234


Q ss_pred             hh-HHHHHHHHHHHHhcc---CCCCeEEEEEecEEEeCCCCcc---cchHHHHHHHhCCCCCCCCcceecccHHHHHHHH
Q 018503          193 DY-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGAL---AKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLI  265 (355)
Q Consensus       193 ~y-~~k~~~~~~~~~~~~---~~~~~~~i~Rp~~i~G~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~  265 (355)
                      .| .+|...+.+...+..   ..++++..++|+.+.++.....   ..+...+  ....+.      ..+++.+|+++++
T Consensus       159 ~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~--~~~~~~------~~~~~~~~~a~~~  230 (256)
T PRK06124        159 VYPAAKQGLTGLMRALAAEFGPHGITSNAIAPGYFATETNAAMAADPAVGPWL--AQRTPL------GRWGRPEEIAGAA  230 (256)
T ss_pred             HhHHHHHHHHHHHHHHHHHHHHhCcEEEEEEECCccCcchhhhccChHHHHHH--HhcCCC------CCCCCHHHHHHHH
Confidence            56 666555544443332   2489999999999988752211   0111111  111111      2378999999999


Q ss_pred             HHHHhCCC--CCC-ceEecCC
Q 018503          266 YEALSNPS--YRG-VINGTAP  283 (355)
Q Consensus       266 ~~~~~~~~--~~~-~~~i~~~  283 (355)
                      +.++..+.  ..| .+.+.+|
T Consensus       231 ~~l~~~~~~~~~G~~i~~dgg  251 (256)
T PRK06124        231 VFLASPAASYVNGHVLAVDGG  251 (256)
T ss_pred             HHHcCcccCCcCCCEEEECCC
Confidence            99998754  234 4444444

>PRK12744 short chain dehydrogenase; Provisional

Probab=99.69  E-value=1.4e-15  Score=131.70  Aligned_cols=223  Identities=10%  Similarity=0.011  Sum_probs=139.5

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhh----cc----CCCCCCccCCCeeecCCcchhhhcC------
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAE----LI----FPGKKTRFFPGVMIAEEPQWRDCIQ------  115 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~----~~----~~~~~~~~~~~~d~~~~~~~~~~~~------  115 (355)
                      .++++||||+|+||.++++.|+++|++|+++.++.....    ..    ...........+|+.+++++.++++      
T Consensus         8 ~k~vlItGa~~gIG~~~a~~l~~~G~~vv~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (257)
T PRK12744          8 GKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAAGAKAVAFQADLTTAAAVEKLFDDAKAAF   87 (257)
T ss_pred             CcEEEEECCCchHHHHHHHHHHHCCCcEEEEecCCccchHHHHHHHHHHHHhCCcEEEEecCcCCHHHHHHHHHHHHHhh
Confidence            478999999999999999999999999888776543211    10    0000001133578888888776653      


Q ss_pred             -CCcEEEECCCCCCC---CCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCCCCccccCCCCCC
Q 018503          116 -GSTAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSG  191 (355)
Q Consensus       116 -~~d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~  191 (355)
                       ++|++||+||....   .....+.....+++|+.++..+++++...-....++++++|+....+.           +..
T Consensus        88 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~iv~~~ss~~~~~~-----------~~~  156 (257)
T PRK12744         88 GRPDIAINTVGKVLKKPIVEISEAEYDEMFAVNSKSAFFFIKEAGRHLNDNGKIVTLVTSLLGAFT-----------PFY  156 (257)
T ss_pred             CCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCEEEEecchhcccC-----------CCc
Confidence             58999999997321   234456677889999999999988876521123567776544331121           223


Q ss_pred             Chh-HHHHHHHHHHHHhccC---CCCeEEEEEecEEEeCCCCcccchHHHHHHHhCCCCCCCCcceecccHHHHHHHHHH
Q 018503          192 NDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYE  267 (355)
Q Consensus       192 ~~y-~~k~~~~~~~~~~~~~---~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~  267 (355)
                      ..| .+|...+.+...+..+   .+++++.++||.+.++....... ....................+.+.+|+|+++..
T Consensus       157 ~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~  235 (257)
T PRK12744        157 SAYAGSKAPVEHFTRAASKEFGARGISVTAVGPGPMDTPFFYPQEG-AEAVAYHKTAAALSPFSKTGLTDIEDIVPFIRF  235 (257)
T ss_pred             ccchhhHHHHHHHHHHHHHHhCcCceEEEEEecCccccchhccccc-cchhhcccccccccccccCCCCCHHHHHHHHHH
Confidence            457 7787777666665543   37999999999997653211100 000000000000111111247899999999999


Q ss_pred             HHhCCC--CCCceEecCCC
Q 018503          268 ALSNPS--YRGVINGTAPN  284 (355)
Q Consensus       268 ~~~~~~--~~~~~~i~~~~  284 (355)
                      +++...  .+.++++.+|.
T Consensus       236 l~~~~~~~~g~~~~~~gg~  254 (257)
T PRK12744        236 LVTDGWWITGQTILINGGY  254 (257)
T ss_pred             hhcccceeecceEeecCCc
Confidence            998532  34578887764

>PRK06057 short chain dehydrogenase; Provisional

Probab=99.69  E-value=1.6e-15  Score=131.27  Aligned_cols=218  Identities=13%  Similarity=0.039  Sum_probs=137.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcC-------CCcEEE
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ-------GSTAVV  121 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-------~~d~vi  121 (355)
                      ++++|+||||+|+||.+++++|+++|++|++++|+............. ....+|+.+.+++.++++       ++|+||
T Consensus         6 ~~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~-~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi   84 (255)
T PRK06057          6 AGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEVGG-LFVPTDVTDEDAVNALFDTAAETYGSVDIAF   84 (255)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCC-cEEEeeCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            457999999999999999999999999999999987654322111000 144578888888776664       579999


Q ss_pred             ECCCCCCC-----CCCChhhHHHHHHHhhhhHHHHHHHHHcC--CCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCChh
Q 018503          122 NLAGTPIG-----TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY  194 (355)
Q Consensus       122 ~~a~~~~~-----~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~~y  194 (355)
                      |+||....     ...+.+.....+++|+.++..+++.+...  +.+..++|++||.... +|..         +....|
T Consensus        85 ~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~~sS~~~~-~g~~---------~~~~~Y  154 (255)
T PRK06057         85 NNAGISPPEDDSILNTGLDAWQRVQDVNLTSVYLCCKAALPHMVRQGKGSIINTASFVAV-MGSA---------TSQISY  154 (255)
T ss_pred             ECCCcCCCCCCCcccCCHHHHHHHHHHhcHHHHHHHHHHHHHHHHhCCcEEEEEcchhhc-cCCC---------CCCcch
Confidence            99986421     12344566788899999987777665321  0345688999886431 4421         112346


Q ss_pred             -HHHHHHHHHHHHhcc---CCCCeEEEEEecEEEeCCCCcc-cchHHHH-HHHhCCCCCCCCcceecccHHHHHHHHHHH
Q 018503          195 -LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGAL-AKMIPLF-MMFAGGPLGSGQQWFSWIHLDDIVNLIYEA  268 (355)
Q Consensus       195 -~~k~~~~~~~~~~~~---~~~~~~~i~Rp~~i~G~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~  268 (355)
                       .+|...+...+.+..   ..+++++.++||.+.++..... ....... +.....+      ...+..++|+|+++..+
T Consensus       155 ~~sKaal~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~a~~~~~l  228 (255)
T PRK06057        155 TASKGGVLAMSRELGVQFARQGIRVNALCPGPVNTPLLQELFAKDPERAARRLVHVP------MGRFAEPEEIAAAVAFL  228 (255)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhCcEEEEEeeCCcCCchhhhhccCCHHHHHHHHhcCC------CCCCcCHHHHHHHHHHH
Confidence             666544333332221   2489999999999987753211 0001101 1111111      12478899999999988


Q ss_pred             HhCCC---CCCceEecCC
Q 018503          269 LSNPS---YRGVINGTAP  283 (355)
Q Consensus       269 ~~~~~---~~~~~~i~~~  283 (355)
                      +....   .+..+.+.++
T Consensus       229 ~~~~~~~~~g~~~~~~~g  246 (255)
T PRK06057        229 ASDDASFITASTFLVDGG  246 (255)
T ss_pred             hCccccCccCcEEEECCC
Confidence            87543   2345666554

>PRK12747 short chain dehydrogenase; Provisional

Probab=99.69  E-value=2.4e-15  Score=129.91  Aligned_cols=219  Identities=16%  Similarity=0.108  Sum_probs=136.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEec-CCchhhcc----CCCCCCccCCCeeecCCcchhhhc---------
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTR-SRSKAELI----FPGKKTRFFPGVMIAEEPQWRDCI---------  114 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r-~~~~~~~~----~~~~~~~~~~~~d~~~~~~~~~~~---------  114 (355)
                      ++++++||||+|+||.+++++|++.|++|++..+ +.+.....    ...........+|+.+.+++..++         
T Consensus         3 ~~k~~lItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   82 (252)
T PRK12747          3 KGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQN   82 (252)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHHhcCCceEEEecccCCHHHHHHHHHHHHHHhhh
Confidence            3579999999999999999999999999988753 33332211    110100112346777766544322         


Q ss_pred             ----CCCcEEEECCCCCCC---CCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCCCCccccCC
Q 018503          115 ----QGSTAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDES  187 (355)
Q Consensus       115 ----~~~d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~  187 (355)
                          .++|++||+||....   .....+.+...+++|+.++..+++++...-....++|++||...  +..         
T Consensus        83 ~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~iv~isS~~~--~~~---------  151 (252)
T PRK12747         83 RTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAAT--RIS---------  151 (252)
T ss_pred             hcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhcCCeEEEECCccc--ccC---------
Confidence                168999999996422   22344556788899999999999877552112358999999865  321         


Q ss_pred             CCCCChh-HHHHHHHHHHHHhcc---CCCCeEEEEEecEEEeCCCCcccchHHHHHHHhCCCCCCCCcceecccHHHHHH
Q 018503          188 SPSGNDY-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVN  263 (355)
Q Consensus       188 ~~~~~~y-~~k~~~~~~~~~~~~---~~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~  263 (355)
                      .+....| .+|...+.+.+.+..   ..|+++..+.||.+.++....... -+........    ......+...+|+|+
T Consensus       152 ~~~~~~Y~~sKaa~~~~~~~la~e~~~~girvn~v~Pg~v~t~~~~~~~~-~~~~~~~~~~----~~~~~~~~~~~dva~  226 (252)
T PRK12747        152 LPDFIAYSMTKGAINTMTFTLAKQLGARGITVNAILPGFIKTDMNAELLS-DPMMKQYATT----ISAFNRLGEVEDIAD  226 (252)
T ss_pred             CCCchhHHHHHHHHHHHHHHHHHHHhHcCCEEEEEecCCccCchhhhccc-CHHHHHHHHh----cCcccCCCCHHHHHH
Confidence            1223467 778776666554443   348999999999998874321100 0011100000    001124788999999


Q ss_pred             HHHHHHhCCC---CCCceEecCC
Q 018503          264 LIYEALSNPS---YRGVINGTAP  283 (355)
Q Consensus       264 ~~~~~~~~~~---~~~~~~i~~~  283 (355)
                      ++..++....   .+..+.+.+|
T Consensus       227 ~~~~l~s~~~~~~~G~~i~vdgg  249 (252)
T PRK12747        227 TAAFLASPDSRWVTGQLIDVSGG  249 (252)
T ss_pred             HHHHHcCccccCcCCcEEEecCC
Confidence            9999987543   2335666554

>PRK07454 short chain dehydrogenase; Provisional

Probab=99.69  E-value=1.2e-15  Score=130.99  Aligned_cols=200  Identities=13%  Similarity=0.094  Sum_probs=134.0

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCC----CCCCccCCCeeecCCcchhhhcC-------CCc
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP----GKKTRFFPGVMIAEEPQWRDCIQ-------GST  118 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~~d~~~~~~~~~~~~-------~~d  118 (355)
                      +++++||||+|.+|++++++|+++|++|++++|+++....+..    .........+|+.+.+++.++++       ++|
T Consensus         6 ~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   85 (241)
T PRK07454          6 MPRALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRSTGVKAAAYSIDLSNPEAIAPGIAELLEQFGCPD   85 (241)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence            4689999999999999999999999999999998765433211    00001133578888887766553       589


Q ss_pred             EEEECCCCCCC---CCCChhhHHHHHHHhhhhHHHHHHHHHcC--CCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCCh
Q 018503          119 AVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGND  193 (355)
Q Consensus       119 ~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~~  193 (355)
                      ++||++|....   .....+.....+++|+.++..+++++...  ..+.+++|++||...  ++..         +....
T Consensus        86 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~--~~~~---------~~~~~  154 (241)
T PRK07454         86 VLINNAGMAYTGPLLEMPLSDWQWVIQLNLTSVFQCCSAVLPGMRARGGGLIINVSSIAA--RNAF---------PQWGA  154 (241)
T ss_pred             EEEECCCccCCCchhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCcEEEEEccHHh--CcCC---------CCccH
Confidence            99999996422   12234566778899999988877665321  145678999999876  4321         22345


Q ss_pred             h-HHHHHHHHHHHHhc---cCCCCeEEEEEecEEEeCCCCcccchHHHHHHHhCCCCCCCCcceecccHHHHHHHHHHHH
Q 018503          194 Y-LAEVCREWEGTALK---VNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEAL  269 (355)
Q Consensus       194 y-~~k~~~~~~~~~~~---~~~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~  269 (355)
                      | .+|...+.+...+.   ...+++++++||+.+-.+..... ....        .+    ....++..+|+|++++.++
T Consensus       155 Y~~sK~~~~~~~~~~a~e~~~~gi~v~~i~pg~i~t~~~~~~-~~~~--------~~----~~~~~~~~~~va~~~~~l~  221 (241)
T PRK07454        155 YCVSKAALAAFTKCLAEEERSHGIRVCTITLGAVNTPLWDTE-TVQA--------DF----DRSAMLSPEQVAQTILHLA  221 (241)
T ss_pred             HHHHHHHHHHHHHHHHHHhhhhCCEEEEEecCcccCCccccc-cccc--------cc----ccccCCCHHHHHHHHHHHH
Confidence            7 66766655544332   23489999999999877642110 0000        00    0113588999999999999


Q ss_pred             hCCC
Q 018503          270 SNPS  273 (355)
Q Consensus       270 ~~~~  273 (355)
                      ..+.
T Consensus       222 ~~~~  225 (241)
T PRK07454        222 QLPP  225 (241)
T ss_pred             cCCc
Confidence            8764

>PRK08085 gluconate 5-dehydrogenase; Provisional

Probab=99.69  E-value=1.3e-15  Score=131.72  Aligned_cols=217  Identities=12%  Similarity=0.082  Sum_probs=141.9

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCC----CCCCccCCCeeecCCcchhhhcC-------CCc
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP----GKKTRFFPGVMIAEEPQWRDCIQ-------GST  118 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~~d~~~~~~~~~~~~-------~~d  118 (355)
                      ++++|||||+|.||++++++|+++|++|++++|+.+.......    .........+|+.|.+++.++++       .+|
T Consensus         9 ~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   88 (254)
T PRK08085          9 GKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQEGIKAHAAPFNVTHKQEVEAAIEHIEKDIGPID   88 (254)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCCHHHHHHHHHHHHHhcCCCC
Confidence            4689999999999999999999999999999998765432211    01001133468888887776653       579


Q ss_pred             EEEECCCCCCC---CCCChhhHHHHHHHhhhhHHHHHHHHHcC--CCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCCh
Q 018503          119 AVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGND  193 (355)
Q Consensus       119 ~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~~  193 (355)
                      +|||++|....   .....+.+...+++|+.++..+++++...  ..+.+++|++||.... ++          .+....
T Consensus        89 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~-~~----------~~~~~~  157 (254)
T PRK08085         89 VLINNAGIQRRHPFTEFPEQEWNDVIAVNQTAVFLVSQAVARYMVKRQAGKIINICSMQSE-LG----------RDTITP  157 (254)
T ss_pred             EEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccchhc-cC----------CCCCcc
Confidence            99999996422   23455667888999999988888776542  1345789999986541 22          122345


Q ss_pred             h-HHHHHHHHHHHHhccC---CCCeEEEEEecEEEeCCCCcccchHHHHHH-HhCCCCCCCCcceecccHHHHHHHHHHH
Q 018503          194 Y-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMM-FAGGPLGSGQQWFSWIHLDDIVNLIYEA  268 (355)
Q Consensus       194 y-~~k~~~~~~~~~~~~~---~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~v~Dva~~~~~~  268 (355)
                      | .+|...+.+...+..+   .|+++..++||.+..+.............. ....+      ...+...+|+|+++..+
T Consensus       158 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~pG~~~t~~~~~~~~~~~~~~~~~~~~p------~~~~~~~~~va~~~~~l  231 (254)
T PRK08085        158 YAASKGAVKMLTRGMCVELARHNIQVNGIAPGYFKTEMTKALVEDEAFTAWLCKRTP------AARWGDPQELIGAAVFL  231 (254)
T ss_pred             hHHHHHHHHHHHHHHHHHHHhhCeEEEEEEeCCCCCcchhhhccCHHHHHHHHhcCC------CCCCcCHHHHHHHHHHH
Confidence            7 7777666665555433   489999999999988743211000000111 11111      12367899999999999


Q ss_pred             HhCCC---CCCceEecCC
Q 018503          269 LSNPS---YRGVINGTAP  283 (355)
Q Consensus       269 ~~~~~---~~~~~~i~~~  283 (355)
                      +....   .+....+.+|
T Consensus       232 ~~~~~~~i~G~~i~~dgg  249 (254)
T PRK08085        232 SSKASDFVNGHLLFVDGG  249 (254)
T ss_pred             hCccccCCcCCEEEECCC
Confidence            98643   3335555444

>PRK12742 oxidoreductase; Provisional

Probab=99.69  E-value=2.1e-15  Score=129.10  Aligned_cols=215  Identities=12%  Similarity=0.053  Sum_probs=136.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCC-chhhccCCCCCCccCCCeeecCCcchhhhcC---CCcEEEECC
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSR-SKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ---GSTAVVNLA  124 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~-~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~---~~d~vi~~a  124 (355)
                      ++++|+||||+|.||++++++|+++|++|+++.|.. +....+..... .....+|+.|.+++.++++   ++|++||+|
T Consensus         5 ~~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~~~-~~~~~~D~~~~~~~~~~~~~~~~id~li~~a   83 (237)
T PRK12742          5 TGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERLAQETG-ATAVQTDSADRDAVIDVVRKSGALDILVVNA   83 (237)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHhC-CeEEecCCCCHHHHHHHHHHhCCCcEEEECC
Confidence            357899999999999999999999999998877643 32222111100 0133467777777766653   589999999


Q ss_pred             CCCCC---CCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCChh-HHHHHH
Q 018503          125 GTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-LAEVCR  200 (355)
Q Consensus       125 ~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~~y-~~k~~~  200 (355)
                      |....   ...+.+..+..+++|+.++..++..+...-...+++|++||...  ..        ...+....| .+|...
T Consensus        84 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~--~~--------~~~~~~~~Y~~sKaa~  153 (237)
T PRK12742         84 GIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPEGGRIIIIGSVNG--DR--------MPVAGMAAYAASKSAL  153 (237)
T ss_pred             CCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcCCeEEEEecccc--cc--------CCCCCCcchHHhHHHH
Confidence            97422   23445677889999999999887665542123468999998653  11        011234567 777766


Q ss_pred             HHHHHHhcc---CCCCeEEEEEecEEEeCCCCcccchHHHHHHH-hCCCCCCCCcceecccHHHHHHHHHHHHhCCC--C
Q 018503          201 EWEGTALKV---NKDVRLALIRIGIVLGKDGGALAKMIPLFMMF-AGGPLGSGQQWFSWIHLDDIVNLIYEALSNPS--Y  274 (355)
Q Consensus       201 ~~~~~~~~~---~~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~--~  274 (355)
                      +.+...+..   ..+++++.++||.+..+.....   .+..... ...+.      ..+...+|+++++..++....  .
T Consensus       154 ~~~~~~la~~~~~~gi~v~~v~Pg~~~t~~~~~~---~~~~~~~~~~~~~------~~~~~p~~~a~~~~~l~s~~~~~~  224 (237)
T PRK12742        154 QGMARGLARDFGPRGITINVVQPGPIDTDANPAN---GPMKDMMHSFMAI------KRHGRPEEVAGMVAWLAGPEASFV  224 (237)
T ss_pred             HHHHHHHHHHHhhhCeEEEEEecCcccCCccccc---cHHHHHHHhcCCC------CCCCCHHHHHHHHHHHcCcccCcc
Confidence            655554433   3489999999999976642211   1111111 11111      135788999999999987543  2


Q ss_pred             CC-ceEecCC
Q 018503          275 RG-VINGTAP  283 (355)
Q Consensus       275 ~~-~~~i~~~  283 (355)
                      .| .+.+.+|
T Consensus       225 ~G~~~~~dgg  234 (237)
T PRK12742        225 TGAMHTIDGA  234 (237)
T ss_pred             cCCEEEeCCC
Confidence            33 5555444

>PRK07478 short chain dehydrogenase; Provisional

Probab=99.68  E-value=2.9e-15  Score=129.59  Aligned_cols=217  Identities=14%  Similarity=0.060  Sum_probs=139.9

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCC----CCCccCCCeeecCCcchhhhcC-------CCc
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG----KKTRFFPGVMIAEEPQWRDCIQ-------GST  118 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~----~~~~~~~~~d~~~~~~~~~~~~-------~~d  118 (355)
                      .++++||||+|.||.+++++|++.|++|++++|++++.......    ........+|+.+++++.++++       .+|
T Consensus         6 ~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   85 (254)
T PRK07478          6 GKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRDEAYAKALVALAVERFGGLD   85 (254)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhcCCCC
Confidence            46899999999999999999999999999999987654332111    1111133468888887766653       689


Q ss_pred             EEEECCCCCCC----CCCChhhHHHHHHHhhhhHHHHHHHH----HcCCCCCCcEEEEeeeeeeeeCCCCCccccCCCCC
Q 018503          119 AVVNLAGTPIG----TRWSSEIKKEIKESRIRVTSKVVDLI----NESPEGVRPSVLVSATALGYYGTSETEVFDESSPS  190 (355)
Q Consensus       119 ~vi~~a~~~~~----~~~~~~~~~~~~~~n~~~~~~l~~a~----~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~  190 (355)
                      ++||+||....    .....+.....+++|+.++..+++++    .+  .+.+++|++||...  +..        ..+.
T Consensus        86 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~--~~~~~iv~~sS~~~--~~~--------~~~~  153 (254)
T PRK07478         86 IAFNNAGTLGEMGPVAEMSLEGWRETLATNLTSAFLGAKHQIPAMLA--RGGGSLIFTSTFVG--HTA--------GFPG  153 (254)
T ss_pred             EEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh--cCCceEEEEechHh--hcc--------CCCC
Confidence            99999996421    23345667888999998877665543    34  45668999999754  321        1123


Q ss_pred             CChh-HHHHHHHHHHHHhccC---CCCeEEEEEecEEEeCCCCcccchHHHHHHHhCCCCCCCCcceecccHHHHHHHHH
Q 018503          191 GNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIY  266 (355)
Q Consensus       191 ~~~y-~~k~~~~~~~~~~~~~---~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~  266 (355)
                      ...| .+|...+.+.+.+..+   .|+.+..++||.+-.+..................     .....+...+|+|++++
T Consensus       154 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~va~~~~  228 (254)
T PRK07478        154 MAAYAASKAGLIGLTQVLAAEYGAQGIRVNALLPGGTDTPMGRAMGDTPEALAFVAGL-----HALKRMAQPEEIAQAAL  228 (254)
T ss_pred             cchhHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeCcccCcccccccCCHHHHHHHHhc-----CCCCCCcCHHHHHHHHH
Confidence            4567 7787766666554443   3799999999998766321111111101111110     01123578999999999


Q ss_pred             HHHhCCC---CCCceEecCC
Q 018503          267 EALSNPS---YRGVINGTAP  283 (355)
Q Consensus       267 ~~~~~~~---~~~~~~i~~~  283 (355)
                      .++..+.   .+..+.+.++
T Consensus       229 ~l~s~~~~~~~G~~~~~dgg  248 (254)
T PRK07478        229 FLASDAASFVTGTALLVDGG  248 (254)
T ss_pred             HHcCchhcCCCCCeEEeCCc
Confidence            9997643   2335656554

>PRK08264 short chain dehydrogenase; Validated

Probab=99.68  E-value=5.4e-16  Score=132.78  Aligned_cols=189  Identities=17%  Similarity=0.105  Sum_probs=132.2

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCC-eEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcC---CCcEEEECCC
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ---GSTAVVNLAG  125 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~---~~d~vi~~a~  125 (355)
                      .++|+||||+|++|++++++|+++|+ +|++++|+.+.... ..  .......+|+.|.+++.++++   .+|+|||++|
T Consensus         6 ~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~-~~--~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~ag   82 (238)
T PRK08264          6 GKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD-LG--PRVVPLQLDVTDPASVAAAAEAASDVTILVNNAG   82 (238)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh-cC--CceEEEEecCCCHHHHHHHHHhcCCCCEEEECCC
Confidence            46899999999999999999999998 99999998766443 11  111134578889888877775   5799999999


Q ss_pred             CCCC----CCCChhhHHHHHHHhhhhHHHHHHHHHcC--CCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCChh-HHHH
Q 018503          126 TPIG----TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-LAEV  198 (355)
Q Consensus       126 ~~~~----~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~~y-~~k~  198 (355)
                      ....    .....+.....+++|+.++..+++++...  ..+.+++|++||...  +..         .+....| .+|.
T Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~--~~~---------~~~~~~y~~sK~  151 (238)
T PRK08264         83 IFRTGSLLLEGDEDALRAEMETNYFGPLAMARAFAPVLAANGGGAIVNVLSVLS--WVN---------FPNLGTYSASKA  151 (238)
T ss_pred             cCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcChhh--ccC---------CCCchHhHHHHH
Confidence            7221    22345667788899999999998886531  135678999998765  431         1223456 6666


Q ss_pred             HHHHHHHHhcc---CCCCeEEEEEecEEEeCCCCcccchHHHHHHHhCCCCCCCCcceecccHHHHHHHHHHHHhCC
Q 018503          199 CREWEGTALKV---NKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNP  272 (355)
Q Consensus       199 ~~~~~~~~~~~---~~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~  272 (355)
                      ..+.....+..   ..+++++++||+.+.++.....                .    ...+..+|+++.++..+..+
T Consensus       152 a~~~~~~~l~~~~~~~~i~~~~v~pg~v~t~~~~~~----------------~----~~~~~~~~~a~~~~~~~~~~  208 (238)
T PRK08264        152 AAWSLTQALRAELAPQGTRVLGVHPGPIDTDMAAGL----------------D----APKASPADVARQILDALEAG  208 (238)
T ss_pred             HHHHHHHHHHHHhhhcCeEEEEEeCCcccccccccC----------------C----cCCCCHHHHHHHHHHHHhCC
Confidence            65554444332   2489999999999876532110                0    01477788888888888754

>PRK07102 short chain dehydrogenase; Provisional

Probab=99.68  E-value=1.5e-15  Score=130.46  Aligned_cols=194  Identities=15%  Similarity=0.114  Sum_probs=131.9

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCC-----CCCccCCCeeecCCcchhhhcC----CCcEEE
Q 018503           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-----KKTRFFPGVMIAEEPQWRDCIQ----GSTAVV  121 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-----~~~~~~~~~d~~~~~~~~~~~~----~~d~vi  121 (355)
                      |+|+||||+|+||.++++.|+++|++|++++|+.++.......     ........+|+.+.+++.++++    ++|++|
T Consensus         2 ~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~d~vv   81 (243)
T PRK07102          2 KKILIIGATSDIARACARRYAAAGARLYLAARDVERLERLADDLRARGAVAVSTHELDILDTASHAAFLDSLPALPDIVL   81 (243)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEecCCCChHHHHHHHHHHhhcCCEEE
Confidence            6899999999999999999999999999999988654332110     0011134578888888776654    469999


Q ss_pred             ECCCCCCC---CCCChhhHHHHHHHhhhhHHHHHHHHHcC--CCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCChh-H
Q 018503          122 NLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-L  195 (355)
Q Consensus       122 ~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~~y-~  195 (355)
                      |++|....   .....+.....+++|+.++..+++++...  ..+.+++|++||.... ++.          +....| .
T Consensus        82 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~-~~~----------~~~~~Y~~  150 (243)
T PRK07102         82 IAVGTLGDQAACEADPALALREFRTNFEGPIALLTLLANRFEARGSGTIVGISSVAGD-RGR----------ASNYVYGS  150 (243)
T ss_pred             ECCcCCCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCEEEEEeccccc-CCC----------CCCcccHH
Confidence            99986422   22344555678899999999988876531  1356789999986541 221          122346 6


Q ss_pred             HHHHHHHHHHHhc---cCCCCeEEEEEecEEEeCCCCcccchHHHHHHHhCCCCCCCCcceecccHHHHHHHHHHHHhCC
Q 018503          196 AEVCREWEGTALK---VNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNP  272 (355)
Q Consensus       196 ~k~~~~~~~~~~~---~~~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~  272 (355)
                      +|...+.....+.   ...|++++.++|+.+.++.....             ..  +  ..-+...+|+|++++..+.++
T Consensus       151 sK~a~~~~~~~l~~el~~~gi~v~~v~pg~v~t~~~~~~-------------~~--~--~~~~~~~~~~a~~i~~~~~~~  213 (243)
T PRK07102        151 AKAALTAFLSGLRNRLFKSGVHVLTVKPGFVRTPMTAGL-------------KL--P--GPLTAQPEEVAKDIFRAIEKG  213 (243)
T ss_pred             HHHHHHHHHHHHHHHhhccCcEEEEEecCcccChhhhcc-------------CC--C--ccccCCHHHHHHHHHHHHhCC
Confidence            6665555444432   24589999999999987632110             00  0  012577999999999999865

>PRK08265 short chain dehydrogenase; Provisional

Probab=99.67  E-value=2.2e-15  Score=130.76  Aligned_cols=221  Identities=11%  Similarity=0.063  Sum_probs=140.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCC-CCCccCCCeeecCCcchhhhcC-------CCcEE
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-KKTRFFPGVMIAEEPQWRDCIQ-------GSTAV  120 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~-------~~d~v  120 (355)
                      ++++++||||+|.||++++++|+++|++|++++|+.+........ ........+|+.|.+++.++++       .+|++
T Consensus         5 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~l   84 (261)
T PRK08265          5 AGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASLGERARFIATDITDDAAIERAVATVVARFGRVDIL   84 (261)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCeeEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            347999999999999999999999999999999987643322111 1001134578999887776653       57999


Q ss_pred             EECCCCCCC--CCCChhhHHHHHHHhhhhHHHHHHHHHcC-CCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCChh-HH
Q 018503          121 VNLAGTPIG--TRWSSEIKKEIKESRIRVTSKVVDLINES-PEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-LA  196 (355)
Q Consensus       121 i~~a~~~~~--~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~~y-~~  196 (355)
                      ||+||....  .....+.+...+++|+.++..+++++... ..+..++|++||.... ++.          +....| .+
T Consensus        85 v~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~-~~~----------~~~~~Y~as  153 (261)
T PRK08265         85 VNLACTYLDDGLASSRADWLAALDVNLVSAAMLAQAAHPHLARGGGAIVNFTSISAK-FAQ----------TGRWLYPAS  153 (261)
T ss_pred             EECCCCCCCCcCcCCHHHHHHHHhHhhHHHHHHHHHHHHHHhcCCcEEEEECchhhc-cCC----------CCCchhHHH
Confidence            999996422  22345667788999999998888876531 1234689999987652 221          123456 66


Q ss_pred             HHHHHHHHHHhcc---CCCCeEEEEEecEEEeCCCCcccc-hHHHHHHHhCCCCCCCCcceecccHHHHHHHHHHHHhCC
Q 018503          197 EVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALAK-MIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNP  272 (355)
Q Consensus       197 k~~~~~~~~~~~~---~~~~~~~i~Rp~~i~G~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~  272 (355)
                      |...+.+.+.+..   ..|++++.++||.+..+....... ......... ..   ......+...+|+|+++..++...
T Consensus       154 Kaa~~~~~~~la~e~~~~gi~vn~v~PG~~~t~~~~~~~~~~~~~~~~~~-~~---~~p~~r~~~p~dva~~~~~l~s~~  229 (261)
T PRK08265        154 KAAIRQLTRSMAMDLAPDGIRVNSVSPGWTWSRVMDELSGGDRAKADRVA-AP---FHLLGRVGDPEEVAQVVAFLCSDA  229 (261)
T ss_pred             HHHHHHHHHHHHHHhcccCEEEEEEccCCccChhhhhhcccchhHHHHhh-cc---cCCCCCccCHHHHHHHHHHHcCcc
Confidence            7655555444333   248999999999887653211100 000000000 00   001123567899999999999754


Q ss_pred             C---CCCceEecCCC
Q 018503          273 S---YRGVINGTAPN  284 (355)
Q Consensus       273 ~---~~~~~~i~~~~  284 (355)
                      .   .+..+.+.+|.
T Consensus       230 ~~~~tG~~i~vdgg~  244 (261)
T PRK08265        230 ASFVTGADYAVDGGY  244 (261)
T ss_pred             ccCccCcEEEECCCe
Confidence            3   33366666653

>PRK09242 tropinone reductase; Provisional

Probab=99.67  E-value=4.4e-15  Score=128.65  Aligned_cols=218  Identities=12%  Similarity=0.085  Sum_probs=140.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCC------CCCccCCCeeecCCcchhhhc-------C
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG------KKTRFFPGVMIAEEPQWRDCI-------Q  115 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~------~~~~~~~~~d~~~~~~~~~~~-------~  115 (355)
                      ..++++||||+|.||+++++.|.++|++|++++|+.+........      ........+|+.+.+++.+++       .
T Consensus         8 ~~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g   87 (257)
T PRK09242          8 DGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDWVEDHWD   87 (257)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            347899999999999999999999999999999987654322110      001112346888887665544       3


Q ss_pred             CCcEEEECCCCCCC---CCCChhhHHHHHHHhhhhHHHHHHHHHcC--CCCCCcEEEEeeeeeeeeCCCCCccccCCCCC
Q 018503          116 GSTAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPS  190 (355)
Q Consensus       116 ~~d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~  190 (355)
                      ++|+|||+||....   .....++....+++|+.++..+++++...  ..+.+++|++||...  +..         .+.
T Consensus        88 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~--~~~---------~~~  156 (257)
T PRK09242         88 GLHILVNNAGGNIRKAAIDYTEDEWRGIFETNLFSAFELSRYAHPLLKQHASSAIVNIGSVSG--LTH---------VRS  156 (257)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCceEEEECcccc--CCC---------CCC
Confidence            68999999996321   23456777888999999999998876421  134578999999765  332         122


Q ss_pred             CChh-HHHHHHHHHHHHhcc---CCCCeEEEEEecEEEeCCCCcccchHHHHH-HHhCCCCCCCCcceecccHHHHHHHH
Q 018503          191 GNDY-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALAKMIPLFM-MFAGGPLGSGQQWFSWIHLDDIVNLI  265 (355)
Q Consensus       191 ~~~y-~~k~~~~~~~~~~~~---~~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~v~Dva~~~  265 (355)
                      ...| .+|...+.+.+.+..   ..+++++.++||.+.++............. .....++      .-+...+|++.++
T Consensus       157 ~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~va~~~  230 (257)
T PRK09242        157 GAPYGMTKAALLQMTRNLAVEWAEDGIRVNAVAPWYIRTPLTSGPLSDPDYYEQVIERTPM------RRVGEPEEVAAAV  230 (257)
T ss_pred             CcchHHHHHHHHHHHHHHHHHHHHhCeEEEEEEECCCCCcccccccCChHHHHHHHhcCCC------CCCcCHHHHHHHH
Confidence            3456 667665555554432   248999999999998775322111111111 1111111      1245789999999


Q ss_pred             HHHHhCCC---CCCceEecCC
Q 018503          266 YEALSNPS---YRGVINGTAP  283 (355)
Q Consensus       266 ~~~~~~~~---~~~~~~i~~~  283 (355)
                      ..++....   .+..+.+.++
T Consensus       231 ~~l~~~~~~~~~g~~i~~~gg  251 (257)
T PRK09242        231 AFLCMPAASYITGQCIAVDGG  251 (257)
T ss_pred             HHHhCcccccccCCEEEECCC
Confidence            99987532   2335555544

>PRK06949 short chain dehydrogenase; Provisional

Probab=99.67  E-value=4.8e-15  Score=128.52  Aligned_cols=208  Identities=12%  Similarity=0.053  Sum_probs=135.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCC----CCCccCCCeeecCCcchhhhcC-------CC
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG----KKTRFFPGVMIAEEPQWRDCIQ-------GS  117 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~----~~~~~~~~~d~~~~~~~~~~~~-------~~  117 (355)
                      ..++|+||||+|+||++++++|++.|++|++++|+.+........    ........+|+.+.+++.++++       .+
T Consensus         8 ~~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   87 (258)
T PRK06949          8 EGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTDYQSIKAAVAHAETEAGTI   87 (258)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcCCC
Confidence            357999999999999999999999999999999987654332111    0001134468888887776654       58


Q ss_pred             cEEEECCCCCCC---CCCChhhHHHHHHHhhhhHHHHHHHHHcC--CC--------CCCcEEEEeeeeeeeeCCCCCccc
Q 018503          118 TAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PE--------GVRPSVLVSATALGYYGTSETEVF  184 (355)
Q Consensus       118 d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~--------~~~~~v~~Ss~~~~~yg~~~~~~~  184 (355)
                      |++||+++....   .....+.+...+++|+.++..+++++...  ..        ...++|++||...  +..      
T Consensus        88 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~--~~~------  159 (258)
T PRK06949         88 DILVNNSGVSTTQKLVDVTPADFDFVFDTNTRGAFFVAQEVAKRMIARAKGAGNTKPGGRIINIASVAG--LRV------  159 (258)
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcCCCCCCCeEEEEECcccc--cCC------
Confidence            999999996432   12234567788899999998888776421  01        1358999988765  321      


Q ss_pred             cCCCCCCChh-HHHHHHHHHHHHhccC---CCCeEEEEEecEEEeCCCCcccchHHHHHHHhCCCCCCCCcceecccHHH
Q 018503          185 DESSPSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDD  260 (355)
Q Consensus       185 ~e~~~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D  260 (355)
                         .+....| .+|...+...+.+..+   .++++++++||.++++...... .......... .+.    ...+...+|
T Consensus       160 ---~~~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pG~v~t~~~~~~~-~~~~~~~~~~-~~~----~~~~~~p~~  230 (258)
T PRK06949        160 ---LPQIGLYCMSKAAVVHMTRAMALEWGRHGINVNAICPGYIDTEINHHHW-ETEQGQKLVS-MLP----RKRVGKPED  230 (258)
T ss_pred             ---CCCccHHHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCCcCCcchhcc-ChHHHHHHHh-cCC----CCCCcCHHH
Confidence               1234567 6676655555444332   4899999999999987532110 0010111111 011    123566799


Q ss_pred             HHHHHHHHHhCCC
Q 018503          261 IVNLIYEALSNPS  273 (355)
Q Consensus       261 va~~~~~~~~~~~  273 (355)
                      +++++..++....
T Consensus       231 ~~~~~~~l~~~~~  243 (258)
T PRK06949        231 LDGLLLLLAADES  243 (258)
T ss_pred             HHHHHHHHhChhh
Confidence            9999999988543

>PRK08277 D-mannonate oxidoreductase; Provisional

Probab=99.67  E-value=1.6e-15  Score=132.95  Aligned_cols=218  Identities=14%  Similarity=0.121  Sum_probs=139.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCC----CCCCccCCCeeecCCcchhhhc-------CCC
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP----GKKTRFFPGVMIAEEPQWRDCI-------QGS  117 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~~d~~~~~~~~~~~-------~~~  117 (355)
                      ..++++||||+|+||++++++|+++|++|++++|+.+.......    .........+|+.+.+++.+++       ..+
T Consensus         9 ~~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i   88 (278)
T PRK08277          9 KGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLDKESLEQARQQILEDFGPC   88 (278)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            34789999999999999999999999999999998654432211    0100113357888887776554       368


Q ss_pred             cEEEECCCCCCCC------------------CCChhhHHHHHHHhhhhHHHHHHHHHcC--CCCCCcEEEEeeeeeeeeC
Q 018503          118 TAVVNLAGTPIGT------------------RWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYG  177 (355)
Q Consensus       118 d~vi~~a~~~~~~------------------~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~~~~v~~Ss~~~~~yg  177 (355)
                      |++||+||.....                  ....+.+...+++|+.++..+++++...  ..+..++|++||...  +.
T Consensus        89 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~--~~  166 (278)
T PRK08277         89 DILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFEFVFDLNLLGTLLPTQVFAKDMVGRKGGNIINISSMNA--FT  166 (278)
T ss_pred             CEEEECCCCCCcccccccccccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccchh--cC
Confidence            9999999953211                  2235667788899999987665544321  134578999999876  43


Q ss_pred             CCCCccccCCCCCCChh-HHHHHHHHHHHHhccC---CCCeEEEEEecEEEeCCCCccc-----chHHHH-HHHhCCCCC
Q 018503          178 TSETEVFDESSPSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALA-----KMIPLF-MMFAGGPLG  247 (355)
Q Consensus       178 ~~~~~~~~e~~~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~i~Rp~~i~G~~~~~~~-----~~~~~~-~~~~~~~~~  247 (355)
                      .         .+....| .+|...+.+.+.+..+   .++++..++|+.+..+......     ...... ......+  
T Consensus       167 ~---------~~~~~~Y~~sK~a~~~l~~~la~e~~~~girvn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~p--  235 (278)
T PRK08277        167 P---------LTKVPAYSAAKAAISNFTQWLAVHFAKVGIRVNAIAPGFFLTEQNRALLFNEDGSLTERANKILAHTP--  235 (278)
T ss_pred             C---------CCCCchhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeccCcCcchhhhhccccccchhHHHHHhccCC--
Confidence            2         1234457 7777666655544443   4899999999999887421110     000000 1111111  


Q ss_pred             CCCcceecccHHHHHHHHHHHHhC-CC---CCCceEecCC
Q 018503          248 SGQQWFSWIHLDDIVNLIYEALSN-PS---YRGVINGTAP  283 (355)
Q Consensus       248 ~~~~~~~~i~v~Dva~~~~~~~~~-~~---~~~~~~i~~~  283 (355)
                          ...+...+|+|++++.++.. ..   .+..+.+.+|
T Consensus       236 ----~~r~~~~~dva~~~~~l~s~~~~~~~tG~~i~vdgG  271 (278)
T PRK08277        236 ----MGRFGKPEELLGTLLWLADEKASSFVTGVVLPVDGG  271 (278)
T ss_pred             ----ccCCCCHHHHHHHHHHHcCccccCCcCCCEEEECCC
Confidence                12367889999999999886 33   3335666555

>PRK07453 protochlorophyllide oxidoreductase; Validated

Probab=99.67  E-value=6.7e-16  Score=138.23  Aligned_cols=178  Identities=15%  Similarity=0.098  Sum_probs=118.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCC----CCCccCCCeeecCCcchhhhcC-------CC
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG----KKTRFFPGVMIAEEPQWRDCIQ-------GS  117 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~----~~~~~~~~~d~~~~~~~~~~~~-------~~  117 (355)
                      .+++|+||||+|+||.++++.|+++|++|++++|+..+.......    ........+|+.|.+++.++++       .+
T Consensus         5 ~~k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i   84 (322)
T PRK07453          5 AKGTVIITGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGDLDSVRRFVDDFRALGKPL   84 (322)
T ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhccCCceEEEEecCCCHHHHHHHHHHHHHhCCCc
Confidence            357899999999999999999999999999999987654322111    0001133578888888776664       48


Q ss_pred             cEEEECCCCCCC----CCCChhhHHHHHHHhhhhHHHHHHHHHcC--CCC--CCcEEEEeeeeeeeeCCCCCc---c--c
Q 018503          118 TAVVNLAGTPIG----TRWSSEIKKEIKESRIRVTSKVVDLINES--PEG--VRPSVLVSATALGYYGTSETE---V--F  184 (355)
Q Consensus       118 d~vi~~a~~~~~----~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~--~~~~v~~Ss~~~~~yg~~~~~---~--~  184 (355)
                      |++||+||....    ...+.+.++..+++|+.++..+++++...  ..+  ..++|++||.... ++...+.   +  .
T Consensus        85 D~li~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~riV~vsS~~~~-~~~~~~~~~~~~~~  163 (322)
T PRK07453         85 DALVCNAAVYMPLLKEPLRSPQGYELSMATNHLGHFLLCNLLLEDLKKSPAPDPRLVILGTVTAN-PKELGGKIPIPAPA  163 (322)
T ss_pred             cEEEECCcccCCCCCCCCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHhCCCCCceEEEEcccccC-ccccCCccCCCCcc
Confidence            999999996422    23355677888999999988888776531  122  3589999997651 2110000   0  0


Q ss_pred             c------------------CC--CCCCChh-HHHHHHHHHHHHhcc----CCCCeEEEEEecEEEeCC
Q 018503          185 D------------------ES--SPSGNDY-LAEVCREWEGTALKV----NKDVRLALIRIGIVLGKD  227 (355)
Q Consensus       185 ~------------------e~--~~~~~~y-~~k~~~~~~~~~~~~----~~~~~~~i~Rp~~i~G~~  227 (355)
                      +                  +.  ..+...| .+|...+.....+..    ..|+.++.++||.+++..
T Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t~  231 (322)
T PRK07453        164 DLGDLSGFEAGFKAPISMADGKKFKPGKAYKDSKLCNMLTMRELHRRYHESTGITFSSLYPGCVADTP  231 (322)
T ss_pred             chhhhhcchhcccccccccCccCCCccchhhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCCc
Confidence            0                  00  1123467 788766554444433    248999999999998643

>PRK08339 short chain dehydrogenase; Provisional

Probab=99.67  E-value=2.8e-15  Score=130.19  Aligned_cols=220  Identities=12%  Similarity=0.015  Sum_probs=140.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCC-----CCCccCCCeeecCCcchhhhcC------CC
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-----KKTRFFPGVMIAEEPQWRDCIQ------GS  117 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-----~~~~~~~~~d~~~~~~~~~~~~------~~  117 (355)
                      +.++++||||+|.||+++++.|+++|++|++++|+.+........     ........+|+.|++++.++++      .+
T Consensus         7 ~~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~g~i   86 (263)
T PRK08339          7 SGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSESNVDVSYIVADLTKREDLERTVKELKNIGEP   86 (263)
T ss_pred             CCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHHHhhCCC
Confidence            346899999999999999999999999999999987654322110     0011134578889888776664      58


Q ss_pred             cEEEECCCCCCC---CCCChhhHHHHHHHhhhhHHHHHHHH----HcCCCCCCcEEEEeeeeeeeeCCCCCccccCCCCC
Q 018503          118 TAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLI----NESPEGVRPSVLVSATALGYYGTSETEVFDESSPS  190 (355)
Q Consensus       118 d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~----~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~  190 (355)
                      |++||+||....   .+.+.+.+...+++|+.+...+++++    ++  .+.+++|++||...  +..         .+.
T Consensus        87 D~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~--~~~g~Ii~isS~~~--~~~---------~~~  153 (263)
T PRK08339         87 DIFFFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMER--KGFGRIIYSTSVAI--KEP---------IPN  153 (263)
T ss_pred             cEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHH--cCCCEEEEEcCccc--cCC---------CCc
Confidence            999999997432   23456777888999988866665544    34  45578999999765  321         112


Q ss_pred             CChh-HHHHHHHHHHHHhcc---CCCCeEEEEEecEEEeCCCCccc-c-------hHHH-HH-HHhCCCCCCCCcceecc
Q 018503          191 GNDY-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALA-K-------MIPL-FM-MFAGGPLGSGQQWFSWI  256 (355)
Q Consensus       191 ~~~y-~~k~~~~~~~~~~~~---~~~~~~~i~Rp~~i~G~~~~~~~-~-------~~~~-~~-~~~~~~~~~~~~~~~~i  256 (355)
                      ...| .+|...+.+.+.+..   ..|+++..+.||.+..+...... .       -.+. .. .....+      ...+.
T Consensus       154 ~~~y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p------~~r~~  227 (263)
T PRK08339        154 IALSNVVRISMAGLVRTLAKELGPKGITVNGIMPGIIRTDRVIQLAQDRAKREGKSVEEALQEYAKPIP------LGRLG  227 (263)
T ss_pred             chhhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCccHHHHHHHHhhhhccCCCHHHHHHHHhccCC------cccCc
Confidence            3346 566655554444433   34899999999998765211000 0       0000 01 011111      12367


Q ss_pred             cHHHHHHHHHHHHhCCC---CCCceEecCCCccC
Q 018503          257 HLDDIVNLIYEALSNPS---YRGVINGTAPNPVR  287 (355)
Q Consensus       257 ~v~Dva~~~~~~~~~~~---~~~~~~i~~~~~~s  287 (355)
                      ..+|+|+++..++....   .+..+.+.+|...|
T Consensus       228 ~p~dva~~v~fL~s~~~~~itG~~~~vdgG~~~~  261 (263)
T PRK08339        228 EPEEIGYLVAFLASDLGSYINGAMIPVDGGRLNS  261 (263)
T ss_pred             CHHHHHHHHHHHhcchhcCccCceEEECCCcccc
Confidence            88999999999987543   33466666665444

>PRK08267 short chain dehydrogenase; Provisional

Probab=99.67  E-value=2.4e-15  Score=130.61  Aligned_cols=202  Identities=13%  Similarity=0.131  Sum_probs=132.9

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCC--CCCccCCCeeecCCcchhhhcC--------CCcEE
Q 018503           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG--KKTRFFPGVMIAEEPQWRDCIQ--------GSTAV  120 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~--~~~~~~~~~d~~~~~~~~~~~~--------~~d~v  120 (355)
                      +++|||||+|+||++++++|+++|++|++++|+.+....+...  ........+|+.|.+++.++++        ++|+|
T Consensus         2 k~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~~id~v   81 (260)
T PRK08267          2 KSIFITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAELGAGNAWTGALDVTDRAAWDAALADFAAATGGRLDVL   81 (260)
T ss_pred             cEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCCEE
Confidence            5799999999999999999999999999999988764433211  0111144678888887766543        56999


Q ss_pred             EECCCCCCC---CCCChhhHHHHHHHhhhhHHHHHHHHHcC--CCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCChh-
Q 018503          121 VNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-  194 (355)
Q Consensus       121 i~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~~y-  194 (355)
                      ||+||....   .....+.....+++|+.++..+++++...  ..+..++|++||.... +|.          +....| 
T Consensus        82 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~-~~~----------~~~~~Y~  150 (260)
T PRK08267         82 FNNAGILRGGPFEDIPLEAHDRVIDINVKGVLNGAHAALPYLKATPGARVINTSSASAI-YGQ----------PGLAVYS  150 (260)
T ss_pred             EECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEeCchhhC-cCC----------CCchhhH
Confidence            999997532   22345667888999999999998877431  1345789999987542 432          123456 


Q ss_pred             HHHHHHHHHHHHhcc---CCCCeEEEEEecEEEeCCCCcccchHHHHHHHhCCCCCCCCcceecccHHHHHHHHHHHHhC
Q 018503          195 LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSN  271 (355)
Q Consensus       195 ~~k~~~~~~~~~~~~---~~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~  271 (355)
                      .+|...+.+...+..   ..+++++.++|+.+..+.......... .....        ...-.+..+|+|++++.++..
T Consensus       151 ~sKaa~~~~~~~l~~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~-~~~~~--------~~~~~~~~~~va~~~~~~~~~  221 (260)
T PRK08267        151 ATKFAVRGLTEALDLEWRRHGIRVADVMPLFVDTAMLDGTSNEVD-AGSTK--------RLGVRLTPEDVAEAVWAAVQH  221 (260)
T ss_pred             HHHHHHHHHHHHHHHHhcccCcEEEEEecCCcCCcccccccchhh-hhhHh--------hccCCCCHHHHHHHHHHHHhC
Confidence            666655554444332   348999999999986543211000000 00000        001135679999999999975


Q ss_pred             C
Q 018503          272 P  272 (355)
Q Consensus       272 ~  272 (355)
                      .
T Consensus       222 ~  222 (260)
T PRK08267        222 P  222 (260)
T ss_pred             C
Confidence            4

>PRK07109 short chain dehydrogenase; Provisional

Probab=99.67  E-value=1.9e-15  Score=135.51  Aligned_cols=209  Identities=13%  Similarity=0.045  Sum_probs=136.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCC----CCCCccCCCeeecCCcchhhhcC-------CC
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP----GKKTRFFPGVMIAEEPQWRDCIQ-------GS  117 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~~d~~~~~~~~~~~~-------~~  117 (355)
                      .+++|+||||+|.||++++++|+++|++|++++|+.+.......    .........+|+.|.+++.++++       .+
T Consensus         7 ~~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d~~~v~~~~~~~~~~~g~i   86 (334)
T PRK07109          7 GRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAAGGEALAVVADVADAEAVQAAADRAEEELGPI   86 (334)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHCCCC
Confidence            34689999999999999999999999999999998765433211    11111134578889888876653       68


Q ss_pred             cEEEECCCCCCC---CCCChhhHHHHHHHhhhhHHHHHHH----HHcCCCCCCcEEEEeeeeeeeeCCCCCccccCCCCC
Q 018503          118 TAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDL----INESPEGVRPSVLVSATALGYYGTSETEVFDESSPS  190 (355)
Q Consensus       118 d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a----~~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~  190 (355)
                      |++||+||....   .....+.....+++|+.+...+.++    +.+  .+.+++|++||...  |..         .+.
T Consensus        87 D~lInnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~--~~~g~iV~isS~~~--~~~---------~~~  153 (334)
T PRK07109         87 DTWVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRP--RDRGAIIQVGSALA--YRS---------IPL  153 (334)
T ss_pred             CEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh--cCCcEEEEeCChhh--ccC---------CCc
Confidence            999999996422   2334566677888988876665544    444  45678999999876  432         122


Q ss_pred             CChh-HHHHHHHHHHHHhc-----cCCCCeEEEEEecEEEeCCCCcccchHHHHHHHhCCCCCCCCcceecccHHHHHHH
Q 018503          191 GNDY-LAEVCREWEGTALK-----VNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNL  264 (355)
Q Consensus       191 ~~~y-~~k~~~~~~~~~~~-----~~~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~  264 (355)
                      ...| .+|...+.+.+.+.     ...++.+++++|+.+..+....       .......   .......+...+|+|++
T Consensus       154 ~~~Y~asK~a~~~~~~~l~~el~~~~~~I~v~~v~Pg~v~T~~~~~-------~~~~~~~---~~~~~~~~~~pe~vA~~  223 (334)
T PRK07109        154 QSAYCAAKHAIRGFTDSLRCELLHDGSPVSVTMVQPPAVNTPQFDW-------ARSRLPV---EPQPVPPIYQPEVVADA  223 (334)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCccCchhhh-------hhhhccc---cccCCCCCCCHHHHHHH
Confidence            3457 66765544433332     2247999999999987663111       0000000   01112246789999999


Q ss_pred             HHHHHhCCCCCCceEecC
Q 018503          265 IYEALSNPSYRGVINGTA  282 (355)
Q Consensus       265 ~~~~~~~~~~~~~~~i~~  282 (355)
                      ++.++.++.  ..+.+++
T Consensus       224 i~~~~~~~~--~~~~vg~  239 (334)
T PRK07109        224 ILYAAEHPR--RELWVGG  239 (334)
T ss_pred             HHHHHhCCC--cEEEeCc
Confidence            999998763  3444543

>PRK06947 glucose-1-dehydrogenase; Provisional

Probab=99.67  E-value=4.9e-15  Score=127.65  Aligned_cols=217  Identities=18%  Similarity=0.086  Sum_probs=132.6

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCCeEEEEec-CCchhhccC----CCCCCccCCCeeecCCcchhhhc-------CCC
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTR-SRSKAELIF----PGKKTRFFPGVMIAEEPQWRDCI-------QGS  117 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r-~~~~~~~~~----~~~~~~~~~~~d~~~~~~~~~~~-------~~~  117 (355)
                      +++|+||||+|+||..+++.|+++|++|+++.+ +.+......    ..........+|+.+.+++.+++       ..+
T Consensus         2 ~k~ilItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   81 (248)
T PRK06947          2 RKVVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRAAGGRACVVAGDVANEADVIAMFDAVQSAFGRL   81 (248)
T ss_pred             CcEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEeccCCHHHHHHHHHHHHHhcCCC
Confidence            468999999999999999999999999987654 433322111    00001113457888887766554       368


Q ss_pred             cEEEECCCCCCC----CCCChhhHHHHHHHhhhhHHHHHHHHHc-CC-CC---CCcEEEEeeeeeeeeCCCCCccccCCC
Q 018503          118 TAVVNLAGTPIG----TRWSSEIKKEIKESRIRVTSKVVDLINE-SP-EG---VRPSVLVSATALGYYGTSETEVFDESS  188 (355)
Q Consensus       118 d~vi~~a~~~~~----~~~~~~~~~~~~~~n~~~~~~l~~a~~~-~~-~~---~~~~v~~Ss~~~~~yg~~~~~~~~e~~  188 (355)
                      |++||+||....    .....++....+.+|+.++..+++++.. .. .+   ..++|++||.... ++...        
T Consensus        82 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~ii~~sS~~~~-~~~~~--------  152 (248)
T PRK06947         82 DALVNNAGIVAPSMPLADMDAARLRRMFDTNVLGAYLCAREAARRLSTDRGGRGGAIVNVSSIASR-LGSPN--------  152 (248)
T ss_pred             CEEEECCccCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhc-CCCCC--------
Confidence            999999996422    2334555677889999998888754332 10 11   2469999986542 33210        


Q ss_pred             CCCChh-HHHHHHHHHHHHhccC---CCCeEEEEEecEEEeCCCCcccchHHHHHHH-hCCCCCCCCcceecccHHHHHH
Q 018503          189 PSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMF-AGGPLGSGQQWFSWIHLDDIVN  263 (355)
Q Consensus       189 ~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~v~Dva~  263 (355)
                       ....| .+|...+.+...++.+   .++++++++||.+..+...... ........ ...+.      --+...+|+|+
T Consensus       153 -~~~~Y~~sK~~~~~~~~~la~~~~~~~i~v~~i~Pg~v~t~~~~~~~-~~~~~~~~~~~~~~------~~~~~~e~va~  224 (248)
T PRK06947        153 -EYVDYAGSKGAVDTLTLGLAKELGPHGVRVNAVRPGLIETEIHASGG-QPGRAARLGAQTPL------GRAGEADEVAE  224 (248)
T ss_pred             -CCcccHhhHHHHHHHHHHHHHHhhhhCcEEEEEeccCcccccccccC-CHHHHHHHhhcCCC------CCCcCHHHHHH
Confidence             11346 6776666555444433   3899999999999877432110 11111111 11111      11467899999


Q ss_pred             HHHHHHhCCC--CCC-ceEecCC
Q 018503          264 LIYEALSNPS--YRG-VINGTAP  283 (355)
Q Consensus       264 ~~~~~~~~~~--~~~-~~~i~~~  283 (355)
                      .++.++.++.  ..| .+.+.++
T Consensus       225 ~~~~l~~~~~~~~~G~~~~~~gg  247 (248)
T PRK06947        225 TIVWLLSDAASYVTGALLDVGGG  247 (248)
T ss_pred             HHHHHcCccccCcCCceEeeCCC
Confidence            9999988754  233 4455443

>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=99.66  E-value=6.6e-15  Score=127.64  Aligned_cols=217  Identities=12%  Similarity=0.081  Sum_probs=140.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhcc---C-CCCCCccCCCeeecCCcchhhhcC-------CC
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELI---F-PGKKTRFFPGVMIAEEPQWRDCIQ-------GS  117 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~---~-~~~~~~~~~~~d~~~~~~~~~~~~-------~~  117 (355)
                      ..++||||||+|.||.+++++|++.|++|++++|+. +....   . ..........+|+.+.+++.++++       .+
T Consensus        14 ~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~i   92 (258)
T PRK06935         14 DGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHGT-NWDETRRLIEKEGRKVTFVQVDLTKPESAEKVVKEALEEFGKI   92 (258)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCc-HHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            347899999999999999999999999999999973 22111   1 100001134578888887776664       67


Q ss_pred             cEEEECCCCCCC---CCCChhhHHHHHHHhhhhHHHHHHHHHcC--CCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCC
Q 018503          118 TAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGN  192 (355)
Q Consensus       118 d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~  192 (355)
                      |++||++|....   .....+.++..+++|+.+...+++++...  ..+.+++|++||...  +...         +..+
T Consensus        93 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~--~~~~---------~~~~  161 (258)
T PRK06935         93 DILVNNAGTIRRAPLLEYKDEDWNAVMDINLNSVYHLSQAVAKVMAKQGSGKIINIASMLS--FQGG---------KFVP  161 (258)
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCeEEEEECCHHh--ccCC---------CCch
Confidence            999999997432   22345567788899999987777665431  145678999999765  3211         2234


Q ss_pred             hh-HHHHHHHHHHHHhccC---CCCeEEEEEecEEEeCCCCcccchHHH-HHHHhCCCCCCCCcceecccHHHHHHHHHH
Q 018503          193 DY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPL-FMMFAGGPLGSGQQWFSWIHLDDIVNLIYE  267 (355)
Q Consensus       193 ~y-~~k~~~~~~~~~~~~~---~~~~~~i~Rp~~i~G~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~  267 (355)
                      .| .+|...+.+.+.+..+   .|++++.++||.+..+........-.. .......+      ...+...+|+|..+..
T Consensus       162 ~Y~asK~a~~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~dva~~~~~  235 (258)
T PRK06935        162 AYTASKHGVAGLTKAFANELAAYNIQVNAIAPGYIKTANTAPIRADKNRNDEILKRIP------AGRWGEPDDLMGAAVF  235 (258)
T ss_pred             hhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeccccccchhhcccChHHHHHHHhcCC------CCCCCCHHHHHHHHHH
Confidence            67 7777666665555443   489999999999877642211000000 01111111      1236788999999999


Q ss_pred             HHhCCC---CCCceEecCC
Q 018503          268 ALSNPS---YRGVINGTAP  283 (355)
Q Consensus       268 ~~~~~~---~~~~~~i~~~  283 (355)
                      ++....   .+.++.+.+|
T Consensus       236 l~s~~~~~~~G~~i~~dgg  254 (258)
T PRK06935        236 LASRASDYVNGHILAVDGG  254 (258)
T ss_pred             HcChhhcCCCCCEEEECCC
Confidence            987543   3346666555

>PRK06139 short chain dehydrogenase; Provisional

Probab=99.66  E-value=5.2e-15  Score=132.16  Aligned_cols=204  Identities=11%  Similarity=0.042  Sum_probs=135.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCC----CCCCccCCCeeecCCcchhhhc-------CCC
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP----GKKTRFFPGVMIAEEPQWRDCI-------QGS  117 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~~d~~~~~~~~~~~-------~~~  117 (355)
                      ..++|+||||+|.||++++++|+++|++|++++|+.+.......    .........+|+.|.+++.+++       .++
T Consensus         6 ~~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i   85 (330)
T PRK06139          6 HGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRALGAEVLVVPTDVTDADQVKALATQAASFGGRI   85 (330)
T ss_pred             CCCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHhcCCC
Confidence            34689999999999999999999999999999998766433211    1111113357888988887665       468


Q ss_pred             cEEEECCCCCCCC---CCChhhHHHHHHHhhhhHHHHHHHHHcC--CCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCC
Q 018503          118 TAVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGN  192 (355)
Q Consensus       118 d~vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~  192 (355)
                      |++|||||.....   ....+.....+++|+.++.++.+++...  ..+..++|++||...  +..         .+...
T Consensus        86 D~lVnnAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~~~~~~~g~iV~isS~~~--~~~---------~p~~~  154 (330)
T PRK06139         86 DVWVNNVGVGAVGRFEETPIEAHEQVIQTNLIGYMRDAHAALPIFKKQGHGIFINMISLGG--FAA---------QPYAA  154 (330)
T ss_pred             CEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHcCCCEEEEEcChhh--cCC---------CCCch
Confidence            9999999974322   2334566788999999988877765321  134568999988765  321         12234


Q ss_pred             hh-HHHHHHHHHHHHh----ccCCCCeEEEEEecEEEeCCCCcccchHHHHHHHhCCCCCCCCcceecccHHHHHHHHHH
Q 018503          193 DY-LAEVCREWEGTAL----KVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYE  267 (355)
Q Consensus       193 ~y-~~k~~~~~~~~~~----~~~~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~  267 (355)
                      .| .+|.....+.+.+    ....++.++.+.|+.+..+........       .+...   .....+.+.+|+|++++.
T Consensus       155 ~Y~asKaal~~~~~sL~~El~~~~gI~V~~v~Pg~v~T~~~~~~~~~-------~~~~~---~~~~~~~~pe~vA~~il~  224 (330)
T PRK06139        155 AYSASKFGLRGFSEALRGELADHPDIHVCDVYPAFMDTPGFRHGANY-------TGRRL---TPPPPVYDPRRVAKAVVR  224 (330)
T ss_pred             hHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEecCCccCccccccccc-------ccccc---cCCCCCCCHHHHHHHHHH
Confidence            67 7776544433333    222489999999999988743211110       01010   111236789999999999


Q ss_pred             HHhCCC
Q 018503          268 ALSNPS  273 (355)
Q Consensus       268 ~~~~~~  273 (355)
                      ++.++.
T Consensus       225 ~~~~~~  230 (330)
T PRK06139        225 LADRPR  230 (330)
T ss_pred             HHhCCC
Confidence            998764

>PRK07035 short chain dehydrogenase; Provisional

Probab=99.66  E-value=6.2e-15  Score=127.34  Aligned_cols=217  Identities=16%  Similarity=0.029  Sum_probs=139.3

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCC----CCCccCCCeeecCCcchhhhcC-------CCc
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG----KKTRFFPGVMIAEEPQWRDCIQ-------GST  118 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~----~~~~~~~~~d~~~~~~~~~~~~-------~~d  118 (355)
                      .++|+||||+|+||.+++++|++.|++|++++|+..........    ........+|+.+.+++.++++       .+|
T Consensus         8 ~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   87 (252)
T PRK07035          8 GKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGEMEQIDALFAHIRERHGRLD   87 (252)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence            46899999999999999999999999999999986543322111    0001133468888777665543       589


Q ss_pred             EEEECCCCCC----CCCCChhhHHHHHHHhhhhHHHHHHHHHcC--CCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCC
Q 018503          119 AVVNLAGTPI----GTRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGN  192 (355)
Q Consensus       119 ~vi~~a~~~~----~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~  192 (355)
                      ++||+|+...    ......+.....+++|+.++..+++++...  ..+.++++++||...  +..         .+...
T Consensus        88 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~--~~~---------~~~~~  156 (252)
T PRK07035         88 ILVNNAAANPYFGHILDTDLGAFQKTVDVNIRGYFFMSVEAGKLMKEQGGGSIVNVASVNG--VSP---------GDFQG  156 (252)
T ss_pred             EEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCcEEEEECchhh--cCC---------CCCCc
Confidence            9999998531    123345666788999999988887766321  145678999988654  211         12345


Q ss_pred             hh-HHHHHHHHHHHHhccC---CCCeEEEEEecEEEeCCCCcccchHHHHHHH-hCCCCCCCCcceecccHHHHHHHHHH
Q 018503          193 DY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMF-AGGPLGSGQQWFSWIHLDDIVNLIYE  267 (355)
Q Consensus       193 ~y-~~k~~~~~~~~~~~~~---~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~v~Dva~~~~~  267 (355)
                      .| .+|...+.+...+..+   .|++++.+.||.+..+............... ...+      ...+...+|+|+++..
T Consensus       157 ~Y~~sK~al~~~~~~l~~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~va~~~~~  230 (252)
T PRK07035        157 IYSITKAAVISMTKAFAKECAPFGIRVNALLPGLTDTKFASALFKNDAILKQALAHIP------LRRHAEPSEMAGAVLY  230 (252)
T ss_pred             chHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeccccCcccccccCCHHHHHHHHccCC------CCCcCCHHHHHHHHHH
Confidence            67 7787776666655443   4899999999988655322111001111111 1111      1235678999999999


Q ss_pred             HHhCCC---CCCceEecCC
Q 018503          268 ALSNPS---YRGVINGTAP  283 (355)
Q Consensus       268 ~~~~~~---~~~~~~i~~~  283 (355)
                      ++.+..   .+.++.+.+|
T Consensus       231 l~~~~~~~~~g~~~~~dgg  249 (252)
T PRK07035        231 LASDASSYTTGECLNVDGG  249 (252)
T ss_pred             HhCccccCccCCEEEeCCC
Confidence            997654   2335555544

>PRK12938 acetyacetyl-CoA reductase; Provisional

Probab=99.66  E-value=1e-14  Score=125.57  Aligned_cols=215  Identities=15%  Similarity=0.055  Sum_probs=134.1

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCC-chhhcc----CCCCCCccCCCeeecCCcchhhhc-------CCC
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSR-SKAELI----FPGKKTRFFPGVMIAEEPQWRDCI-------QGS  117 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~-~~~~~~----~~~~~~~~~~~~d~~~~~~~~~~~-------~~~  117 (355)
                      .+.++||||+|+||++++++|+++|++|++..+.. ......    ...........+|+.|.+++.+++       .++
T Consensus         3 ~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   82 (246)
T PRK12938          3 QRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGDWDSTKAAFDKVKAEVGEI   82 (246)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCC
Confidence            46899999999999999999999999998865432 221111    111100012247888887776655       368


Q ss_pred             cEEEECCCCCCC---CCCChhhHHHHHHHhhhhHHHHHHHHHcC--CCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCC
Q 018503          118 TAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGN  192 (355)
Q Consensus       118 d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~  192 (355)
                      |+|||+||....   ...+.+.+...+++|+.++..+.+++...  ..+.+++|++||.... ++          .+...
T Consensus        83 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~-~~----------~~~~~  151 (246)
T PRK12938         83 DVLVNNAGITRDVVFRKMTREDWTAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQ-KG----------QFGQT  151 (246)
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEechhcc-CC----------CCCCh
Confidence            999999997432   23355667888999999977766554321  1466789999987541 21          12234


Q ss_pred             hh-HHHHHHHHHHHHhcc---CCCCeEEEEEecEEEeCCCCcccchHHH-HHHHhCCCCCCCCcceecccHHHHHHHHHH
Q 018503          193 DY-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALAKMIPL-FMMFAGGPLGSGQQWFSWIHLDDIVNLIYE  267 (355)
Q Consensus       193 ~y-~~k~~~~~~~~~~~~---~~~~~~~i~Rp~~i~G~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~  267 (355)
                      .| .+|...+.+...+..   ..++++..++|+.+.++.....   .+. .....+.     .....+...+|+++++..
T Consensus       152 ~y~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~~~t~~~~~~---~~~~~~~~~~~-----~~~~~~~~~~~v~~~~~~  223 (246)
T PRK12938        152 NYSTAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKAI---RPDVLEKIVAT-----IPVRRLGSPDEIGSIVAW  223 (246)
T ss_pred             hHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEecccCCchhhhc---ChHHHHHHHhc-----CCccCCcCHHHHHHHHHH
Confidence            56 666654444433332   3589999999999987643211   111 1111111     112235778999999999


Q ss_pred             HHhCCC---CCCceEecCC
Q 018503          268 ALSNPS---YRGVINGTAP  283 (355)
Q Consensus       268 ~~~~~~---~~~~~~i~~~  283 (355)
                      ++..+.   .+..+.+.++
T Consensus       224 l~~~~~~~~~g~~~~~~~g  242 (246)
T PRK12938        224 LASEESGFSTGADFSLNGG  242 (246)
T ss_pred             HcCcccCCccCcEEEECCc
Confidence            887643   3346666554

>PRK06198 short chain dehydrogenase; Provisional

Probab=99.66  E-value=1.8e-15  Score=131.39  Aligned_cols=220  Identities=15%  Similarity=0.092  Sum_probs=142.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCe-EEEEecCCchhhccC----CCCCCccCCCeeecCCcchhhhcC-------C
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQ-VRVLTRSRSKAELIF----PGKKTRFFPGVMIAEEPQWRDCIQ-------G  116 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~-V~~~~r~~~~~~~~~----~~~~~~~~~~~d~~~~~~~~~~~~-------~  116 (355)
                      +.++|+||||+|+||++++++|++.|++ |++++|+.++.....    ..........+|+.+++++.++++       +
T Consensus         5 ~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   84 (260)
T PRK06198          5 DGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSDVEDCRRVVAAADEAFGR   84 (260)
T ss_pred             CCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            4578999999999999999999999998 999999865443211    111001123468888887766653       5


Q ss_pred             CcEEEECCCCCCC---CCCChhhHHHHHHHhhhhHHHHHHHHHcC--CC-CCCcEEEEeeeeeeeeCCCCCccccCCCCC
Q 018503          117 STAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PE-GVRPSVLVSATALGYYGTSETEVFDESSPS  190 (355)
Q Consensus       117 ~d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~-~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~  190 (355)
                      +|++||++|....   .....+.....+++|+.++.++++++...  .. ...++|++||...  ++..         +.
T Consensus        85 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~ss~~~--~~~~---------~~  153 (260)
T PRK06198         85 LDALVNAAGLTDRGTILDTSPELFDRHFAVNVRAPFFLMQEAIKLMRRRKAEGTIVNIGSMSA--HGGQ---------PF  153 (260)
T ss_pred             CCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECCccc--ccCC---------CC
Confidence            8999999997432   12345556778899999999998877431  01 2357999998776  4421         22


Q ss_pred             CChh-HHHHHHHHHHHHhcc---CCCCeEEEEEecEEEeCCCCcc----cch-HHHHHHHhCCCCCCCCcceecccHHHH
Q 018503          191 GNDY-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGAL----AKM-IPLFMMFAGGPLGSGQQWFSWIHLDDI  261 (355)
Q Consensus       191 ~~~y-~~k~~~~~~~~~~~~---~~~~~~~i~Rp~~i~G~~~~~~----~~~-~~~~~~~~~~~~~~~~~~~~~i~v~Dv  261 (355)
                      ...| .+|...+.....+..   ..+++++.++|+.++++.....    ... .........     ......+++.+|+
T Consensus       154 ~~~Y~~sK~a~~~~~~~~a~e~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~  228 (260)
T PRK06198        154 LAAYCASKGALATLTRNAAYALLRNRIRVNGLNIGWMATEGEDRIQREFHGAPDDWLEKAAA-----TQPFGRLLDPDEV  228 (260)
T ss_pred             cchhHHHHHHHHHHHHHHHHHhcccCeEEEEEeeccccCcchhhhhhhccCCChHHHHHHhc-----cCCccCCcCHHHH
Confidence            3457 777766665554433   2479999999999988753110    000 011111110     1112346899999


Q ss_pred             HHHHHHHHhCCC---CCCceEecCCC
Q 018503          262 VNLIYEALSNPS---YRGVINGTAPN  284 (355)
Q Consensus       262 a~~~~~~~~~~~---~~~~~~i~~~~  284 (355)
                      |++++.++....   .+..+.+.++.
T Consensus       229 a~~~~~l~~~~~~~~~G~~~~~~~~~  254 (260)
T PRK06198        229 ARAVAFLLSDESGLMTGSVIDFDQSV  254 (260)
T ss_pred             HHHHHHHcChhhCCccCceEeECCcc
Confidence            999999986543   34466666554

>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.66  E-value=8e-15  Score=126.68  Aligned_cols=214  Identities=13%  Similarity=0.058  Sum_probs=139.6

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCC----CCCCccCCCeeecCCcchhhhcC-------CCc
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP----GKKTRFFPGVMIAEEPQWRDCIQ-------GST  118 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~~d~~~~~~~~~~~~-------~~d  118 (355)
                      .++++||||+|+||.++++.|+++|++|++++|+..+......    .........+|+.+.+++.++++       .+|
T Consensus         5 ~~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   84 (253)
T PRK08217          5 DKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGALGTEVRGYAANVTDEEDVEATFAQIAEDFGQLN   84 (253)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence            4689999999999999999999999999999998754332211    00000123568888777655443       479


Q ss_pred             EEEECCCCCCC------------CCCChhhHHHHHHHhhhhHHHHHHHHHcC---CCCCCcEEEEeeeeeeeeCCCCCcc
Q 018503          119 AVVNLAGTPIG------------TRWSSEIKKEIKESRIRVTSKVVDLINES---PEGVRPSVLVSATALGYYGTSETEV  183 (355)
Q Consensus       119 ~vi~~a~~~~~------------~~~~~~~~~~~~~~n~~~~~~l~~a~~~~---~~~~~~~v~~Ss~~~~~yg~~~~~~  183 (355)
                      +|||++|....            .....+.....+++|+.++..+.+++...   ......++++||...  |+.     
T Consensus        85 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~iv~~ss~~~--~~~-----  157 (253)
T PRK08217         85 GLINNAGILRDGLLVKAKDGKVTSKMSLEQFQSVIDVNLTGVFLCGREAAAKMIESGSKGVIINISSIAR--AGN-----  157 (253)
T ss_pred             EEEECCCccCcCcccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEccccc--cCC-----
Confidence            99999986321            22344566778889999988776544321   013346888888755  552     


Q ss_pred             ccCCCCCCChh-HHHHHHHHHHHHhcc---CCCCeEEEEEecEEEeCCCCcccchHHHH-H-HHhCCCCCCCCcceeccc
Q 018503          184 FDESSPSGNDY-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALAKMIPLF-M-MFAGGPLGSGQQWFSWIH  257 (355)
Q Consensus       184 ~~e~~~~~~~y-~~k~~~~~~~~~~~~---~~~~~~~i~Rp~~i~G~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~i~  257 (355)
                           +....| .+|...+.....+..   ..+++++.++|+.+.++.....   .+.. . .....+      ...+.+
T Consensus       158 -----~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~pg~v~t~~~~~~---~~~~~~~~~~~~~------~~~~~~  223 (253)
T PRK08217        158 -----MGQTNYSASKAGVAAMTVTWAKELARYGIRVAAIAPGVIETEMTAAM---KPEALERLEKMIP------VGRLGE  223 (253)
T ss_pred             -----CCCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCcccccc---CHHHHHHHHhcCC------cCCCcC
Confidence                 223457 677666655544433   2589999999999987753221   1111 1 111111      234678


Q ss_pred             HHHHHHHHHHHHhCCC-CCCceEecCCC
Q 018503          258 LDDIVNLIYEALSNPS-YRGVINGTAPN  284 (355)
Q Consensus       258 v~Dva~~~~~~~~~~~-~~~~~~i~~~~  284 (355)
                      .+|+|+++..++.... .+.+|++.++.
T Consensus       224 ~~~~a~~~~~l~~~~~~~g~~~~~~gg~  251 (253)
T PRK08217        224 PEEIAHTVRFIIENDYVTGRVLEIDGGL  251 (253)
T ss_pred             HHHHHHHHHHHHcCCCcCCcEEEeCCCc
Confidence            9999999999997644 44588888764

>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=99.66  E-value=5.5e-15  Score=127.50  Aligned_cols=218  Identities=10%  Similarity=0.060  Sum_probs=140.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhh--ccCCCCCCccCCCeeecCCcchhhhcC-------CCcE
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAE--LIFPGKKTRFFPGVMIAEEPQWRDCIQ-------GSTA  119 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~--~~~~~~~~~~~~~~d~~~~~~~~~~~~-------~~d~  119 (355)
                      ..++++||||+|.||++++++|+++|++|++++|+.....  .............+|+.+.+++.++++       .+|+
T Consensus         7 ~~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~iD~   86 (251)
T PRK12481          7 NGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEAPETQAQVEALGRKFHFITADLIQQKDIDSIVSQAVEVMGHIDI   86 (251)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHcCCeEEEEEeCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            3478999999999999999999999999999988653211  111111111134578999888876663       5899


Q ss_pred             EEECCCCCCC---CCCChhhHHHHHHHhhhhHHHHHHHHHcC--CCC-CCcEEEEeeeeeeeeCCCCCccccCCCCCCCh
Q 018503          120 VVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEG-VRPSVLVSATALGYYGTSETEVFDESSPSGND  193 (355)
Q Consensus       120 vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~-~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~~  193 (355)
                      +||+||....   ...+.+.+...+++|+.++..+.+++...  ..+ ..++|++||...  +...         +....
T Consensus        87 lv~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~--~~~~---------~~~~~  155 (251)
T PRK12481         87 LINNAGIIRRQDLLEFGNKDWDDVININQKTVFFLSQAVAKQFVKQGNGGKIINIASMLS--FQGG---------IRVPS  155 (251)
T ss_pred             EEECCCcCCCCCcccCCHHHHHHHheeCcHHHHHHHHHHHHHHHHcCCCCEEEEeCChhh--cCCC---------CCCcc
Confidence            9999997432   23356777889999999988887766431  122 368999999765  3321         12345


Q ss_pred             h-HHHHHHHHHHHHhcc---CCCCeEEEEEecEEEeCCCCcccchHHHH-HHHhCCCCCCCCcceecccHHHHHHHHHHH
Q 018503          194 Y-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALAKMIPLF-MMFAGGPLGSGQQWFSWIHLDDIVNLIYEA  268 (355)
Q Consensus       194 y-~~k~~~~~~~~~~~~---~~~~~~~i~Rp~~i~G~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~  268 (355)
                      | .+|...+.+.+.+..   ..|+++..++||.+-.+............ ......+.      -.+...+|+|+++..+
T Consensus       156 Y~asK~a~~~l~~~la~e~~~~girvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~------~~~~~peeva~~~~~L  229 (251)
T PRK12481        156 YTASKSAVMGLTRALATELSQYNINVNAIAPGYMATDNTAALRADTARNEAILERIPA------SRWGTPDDLAGPAIFL  229 (251)
T ss_pred             hHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCCCccCchhhcccChHHHHHHHhcCCC------CCCcCHHHHHHHHHHH
Confidence            7 777766666554444   35899999999998765322110000000 11111111      1357889999999999


Q ss_pred             HhCCC---CCCceEecCC
Q 018503          269 LSNPS---YRGVINGTAP  283 (355)
Q Consensus       269 ~~~~~---~~~~~~i~~~  283 (355)
                      +....   .+..+.+.+|
T Consensus       230 ~s~~~~~~~G~~i~vdgg  247 (251)
T PRK12481        230 SSSASDYVTGYTLAVDGG  247 (251)
T ss_pred             hCccccCcCCceEEECCC
Confidence            97543   2335555444

>PRK08251 short chain dehydrogenase; Provisional

Probab=99.66  E-value=2.9e-15  Score=129.08  Aligned_cols=196  Identities=14%  Similarity=0.151  Sum_probs=132.0

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCC------CCCccCCCeeecCCcchhhhc-------CC
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG------KKTRFFPGVMIAEEPQWRDCI-------QG  116 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~------~~~~~~~~~d~~~~~~~~~~~-------~~  116 (355)
                      +++++||||+|+||++++++|+++|++|++++|++.........      ........+|+.+.+++.+++       .+
T Consensus         2 ~k~vlItGas~giG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   81 (248)
T PRK08251          2 RQKILITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFRDELGG   81 (248)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            46899999999999999999999999999999987654332110      000113356888888776554       36


Q ss_pred             CcEEEECCCCCCCC---CCChhhHHHHHHHhhhhHHHHHHHHHcC--CCCCCcEEEEeeeeeeeeCCCCCccccCCCCCC
Q 018503          117 STAVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSG  191 (355)
Q Consensus       117 ~d~vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~  191 (355)
                      +|++||+||.....   ....+.....+++|+.++..+++++...  ..+.+++|++||.... +|..         ...
T Consensus        82 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~-~~~~---------~~~  151 (248)
T PRK08251         82 LDRVIVNAGIGKGARLGTGKFWANKATAETNFVAALAQCEAAMEIFREQGSGHLVLISSVSAV-RGLP---------GVK  151 (248)
T ss_pred             CCEEEECCCcCCCCCcCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeccccc-cCCC---------CCc
Confidence            89999999974332   2234555678899999998888876421  1456789999986541 2311         113


Q ss_pred             Chh-HHHHHHHHHHHHhcc---CCCCeEEEEEecEEEeCCCCcccchHHHHHHHhCCCCCCCCcceecccHHHHHHHHHH
Q 018503          192 NDY-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYE  267 (355)
Q Consensus       192 ~~y-~~k~~~~~~~~~~~~---~~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~  267 (355)
                      ..| .+|...+.....+..   ..+++++.++|+.+.++.....          .       . ....+..+|+|++++.
T Consensus       152 ~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~----------~-------~-~~~~~~~~~~a~~i~~  213 (248)
T PRK08251        152 AAYAASKAGVASLGEGLRAELAKTPIKVSTIEPGYIRSEMNAKA----------K-------S-TPFMVDTETGVKALVK  213 (248)
T ss_pred             ccHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcCcchhhhcc----------c-------c-CCccCCHHHHHHHHHH
Confidence            457 677655554444332   2479999999999876532110          0       0 1125789999999999


Q ss_pred             HHhCCC
Q 018503          268 ALSNPS  273 (355)
Q Consensus       268 ~~~~~~  273 (355)
                      .++++.
T Consensus       214 ~~~~~~  219 (248)
T PRK08251        214 AIEKEP  219 (248)
T ss_pred             HHhcCC
Confidence            998653

>PRK07578 short chain dehydrogenase; Provisional

Probab=99.66  E-value=3.7e-15  Score=123.99  Aligned_cols=189  Identities=19%  Similarity=0.125  Sum_probs=131.2

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcC---CCcEEEECCCCC
Q 018503           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ---GSTAVVNLAGTP  127 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~---~~d~vi~~a~~~  127 (355)
                      |+++||||+|.||++++++|.++ ++|++++|+..             ...+|+.|.++++++++   ++|++||+||..
T Consensus         1 ~~vlItGas~giG~~la~~l~~~-~~vi~~~r~~~-------------~~~~D~~~~~~~~~~~~~~~~id~lv~~ag~~   66 (199)
T PRK07578          1 MKILVIGASGTIGRAVVAELSKR-HEVITAGRSSG-------------DVQVDITDPASIRALFEKVGKVDAVVSAAGKV   66 (199)
T ss_pred             CeEEEEcCCcHHHHHHHHHHHhc-CcEEEEecCCC-------------ceEecCCChHHHHHHHHhcCCCCEEEECCCCC
Confidence            58999999999999999999999 99999999753             22479999988877765   689999999964


Q ss_pred             CCC---CCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCChh-HHHHHHHHH
Q 018503          128 IGT---RWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-LAEVCREWE  203 (355)
Q Consensus       128 ~~~---~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~~y-~~k~~~~~~  203 (355)
                      ...   ....+.+...+++|+.++.++++++...-....+++++||...  ..         ..+....| .+|...+.+
T Consensus        67 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~iss~~~--~~---------~~~~~~~Y~~sK~a~~~~  135 (199)
T PRK07578         67 HFAPLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLNDGGSFTLTSGILS--DE---------PIPGGASAATVNGALEGF  135 (199)
T ss_pred             CCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEccccc--CC---------CCCCchHHHHHHHHHHHH
Confidence            221   2345567788899999999999877542113357888887643  11         01223457 677665555


Q ss_pred             HHHhcc--CCCCeEEEEEecEEEeCCCCcccchHHHHHHHhCCCCCCCCcceecccHHHHHHHHHHHHhCCCCCCceEe
Q 018503          204 GTALKV--NKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRGVING  280 (355)
Q Consensus       204 ~~~~~~--~~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~~~~~~i  280 (355)
                      .+.+..  ..|+++..++||.+-.+..    ..        +..+.    ...++..+|+|+++..++.....+++|++
T Consensus       136 ~~~la~e~~~gi~v~~i~Pg~v~t~~~----~~--------~~~~~----~~~~~~~~~~a~~~~~~~~~~~~g~~~~~  198 (199)
T PRK07578        136 VKAAALELPRGIRINVVSPTVLTESLE----KY--------GPFFP----GFEPVPAARVALAYVRSVEGAQTGEVYKV  198 (199)
T ss_pred             HHHHHHHccCCeEEEEEcCCcccCchh----hh--------hhcCC----CCCCCCHHHHHHHHHHHhccceeeEEecc
Confidence            554433  3589999999998744311    00        00010    12368999999999999986544556654

>PRK07041 short chain dehydrogenase; Provisional

Probab=99.66  E-value=3e-15  Score=127.44  Aligned_cols=214  Identities=17%  Similarity=0.086  Sum_probs=142.3

Q ss_pred             EEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCC---CCCccCCCeeecCCcchhhhcC---CCcEEEECCCCC
Q 018503           54 SVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG---KKTRFFPGVMIAEEPQWRDCIQ---GSTAVVNLAGTP  127 (355)
Q Consensus        54 lVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~---~~~~~~~~~d~~~~~~~~~~~~---~~d~vi~~a~~~  127 (355)
                      +||||+|++|++++++|+++|++|++++|+.+........   ........+|+.|.+++.++++   .+|++||+++..
T Consensus         1 lItGas~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~id~li~~ag~~   80 (230)
T PRK07041          1 LVVGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAARALGGGAPVRTAALDITDEAAVDAFFAEAGPFDHVVITAADT   80 (230)
T ss_pred             CeecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHhcCCCCEEEECCCCC
Confidence            5999999999999999999999999999986554322110   0101134578889988888775   479999999974


Q ss_pred             CCC---CCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCChh-HHHHHHHHH
Q 018503          128 IGT---RWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-LAEVCREWE  203 (355)
Q Consensus       128 ~~~---~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~~y-~~k~~~~~~  203 (355)
                      ...   ....+.....+++|+.++..++++...  .+.+++|++||...  |..         .+..+.| .+|...+.+
T Consensus        81 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~--~~~g~iv~~ss~~~--~~~---------~~~~~~Y~~sK~a~~~~  147 (230)
T PRK07041         81 PGGPVRALPLAAAQAAMDSKFWGAYRVARAARI--APGGSLTFVSGFAA--VRP---------SASGVLQGAINAALEAL  147 (230)
T ss_pred             CCCChhhCCHHHHHHHHHHHHHHHHHHHhhhhh--cCCeEEEEECchhh--cCC---------CCcchHHHHHHHHHHHH
Confidence            321   234566788999999999999996655  45678999998776  432         2234567 777666666


Q ss_pred             HHHhccCC-CCeEEEEEecEEEeCCCCcc--cchHHHHH-HHhCCCCCCCCcceecccHHHHHHHHHHHHhCCCC-CCce
Q 018503          204 GTALKVNK-DVRLALIRIGIVLGKDGGAL--AKMIPLFM-MFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSY-RGVI  278 (355)
Q Consensus       204 ~~~~~~~~-~~~~~i~Rp~~i~G~~~~~~--~~~~~~~~-~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~-~~~~  278 (355)
                      .+.+..+. +++++.++|+.+-.+.....  ........ .....+.      ..+...+|+|++++.++..... +..|
T Consensus       148 ~~~la~e~~~irv~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~dva~~~~~l~~~~~~~G~~~  221 (230)
T PRK07041        148 ARGLALELAPVRVNTVSPGLVDTPLWSKLAGDAREAMFAAAAERLPA------RRVGQPEDVANAILFLAANGFTTGSTV  221 (230)
T ss_pred             HHHHHHHhhCceEEEEeecccccHHHHhhhccchHHHHHHHHhcCCC------CCCcCHHHHHHHHHHHhcCCCcCCcEE
Confidence            55544432 57888999988765431110  00011111 1111111      1245789999999999986543 4588


Q ss_pred             EecCCCcc
Q 018503          279 NGTAPNPV  286 (355)
Q Consensus       279 ~i~~~~~~  286 (355)
                      ++.+|.++
T Consensus       222 ~v~gg~~~  229 (230)
T PRK07041        222 LVDGGHAI  229 (230)
T ss_pred             EeCCCeec
Confidence            88887643

>PRK08703 short chain dehydrogenase; Provisional

Probab=99.66  E-value=1.1e-14  Score=124.79  Aligned_cols=197  Identities=12%  Similarity=0.066  Sum_probs=129.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCC-----CCCccCCCeeecCC--cchhhh-------c
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-----KKTRFFPGVMIAEE--PQWRDC-------I  114 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-----~~~~~~~~~d~~~~--~~~~~~-------~  114 (355)
                      .+++|+||||+|++|++++++|+++|++|++++|+..........     ........+|+.+.  +++.++       +
T Consensus         5 ~~k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~i~~~~   84 (239)
T PRK08703          5 SDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQFAATIAEAT   84 (239)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHHHcCCCCcceEEeeecccchHHHHHHHHHHHHHh
Confidence            447999999999999999999999999999999988654322110     00011334677642  333332       2


Q ss_pred             -CCCcEEEECCCCCCC----CCCChhhHHHHHHHhhhhHHHHHHHHHcC--CCCCCcEEEEeeeeeeeeCCCCCccccCC
Q 018503          115 -QGSTAVVNLAGTPIG----TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDES  187 (355)
Q Consensus       115 -~~~d~vi~~a~~~~~----~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~  187 (355)
                       ..+|+|||+||....    .....++....+++|+.++..+++++...  ..+..+++++||...  ..         .
T Consensus        85 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~ss~~~--~~---------~  153 (239)
T PRK08703         85 QGKLDGIVHCAGYFYALSPLDFQTVAEWVNQYRINTVAPMGLTRALFPLLKQSPDASVIFVGESHG--ET---------P  153 (239)
T ss_pred             CCCCCEEEEeccccccCCCccccCHHHHHHHHHHhhhHHHHHHHHHHHHHHhCCCCEEEEEecccc--cc---------C
Confidence             467999999996421    22334566778899999988888777442  134568999988543  11         1


Q ss_pred             CCCCChh-HHHHHHHHHHHHhccC----CCCeEEEEEecEEEeCCCCcccchHHHHHHHhCCCCCCCCcceecccHHHHH
Q 018503          188 SPSGNDY-LAEVCREWEGTALKVN----KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIV  262 (355)
Q Consensus       188 ~~~~~~y-~~k~~~~~~~~~~~~~----~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva  262 (355)
                      .+....| .+|...+.+...+..+    .+++++.++||.++++.....   .+            +.....+...+|++
T Consensus       154 ~~~~~~Y~~sKaa~~~~~~~la~e~~~~~~i~v~~v~pG~v~t~~~~~~---~~------------~~~~~~~~~~~~~~  218 (239)
T PRK08703        154 KAYWGGFGASKAALNYLCKVAADEWERFGNLRANVLVPGPINSPQRIKS---HP------------GEAKSERKSYGDVL  218 (239)
T ss_pred             CCCccchHHhHHHHHHHHHHHHHHhccCCCeEEEEEecCcccCcccccc---CC------------CCCccccCCHHHHH
Confidence            1223457 7777766665554443    269999999999998852211   00            11112357899999


Q ss_pred             HHHHHHHhC
Q 018503          263 NLIYEALSN  271 (355)
Q Consensus       263 ~~~~~~~~~  271 (355)
                      ..+..++..
T Consensus       219 ~~~~~~~~~  227 (239)
T PRK08703        219 PAFVWWASA  227 (239)
T ss_pred             HHHHHHhCc
Confidence            999999984

>PRK06172 short chain dehydrogenase; Provisional

Probab=99.65  E-value=7.3e-15  Score=126.99  Aligned_cols=219  Identities=12%  Similarity=0.042  Sum_probs=140.4

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCC----CCCCccCCCeeecCCcchhhhcC-------CCc
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP----GKKTRFFPGVMIAEEPQWRDCIQ-------GST  118 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~~d~~~~~~~~~~~~-------~~d  118 (355)
                      .++|+||||+|+||.+++++|++.|++|++++|+.+.......    .........+|+.+.+++.++++       .+|
T Consensus         7 ~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id   86 (253)
T PRK06172          7 GKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREAGGEALFVACDVTRDAEVKALVEQTIAAYGRLD   86 (253)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhCCCC
Confidence            4799999999999999999999999999999998765332211    11001134578888887766553       569


Q ss_pred             EEEECCCCCCC----CCCChhhHHHHHHHhhhhHHHHHHHHHcC--CCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCC
Q 018503          119 AVVNLAGTPIG----TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGN  192 (355)
Q Consensus       119 ~vi~~a~~~~~----~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~  192 (355)
                      ++||++|....    .....+.+...+++|+.++..+++++...  ..+..++|++||...  +...         +...
T Consensus        87 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~sS~~~--~~~~---------~~~~  155 (253)
T PRK06172         87 YAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWLCMKYQIPLMLAQGGGAIVNTASVAG--LGAA---------PKMS  155 (253)
T ss_pred             EEEECCCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECchhh--ccCC---------CCCc
Confidence            99999996422    22345667788899999987766543210  134568999998766  4321         2245


Q ss_pred             hh-HHHHHHHHHHHHhccC---CCCeEEEEEecEEEeCCCCcccc-hHHHHHHHhCCCCCCCCcceecccHHHHHHHHHH
Q 018503          193 DY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAK-MIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYE  267 (355)
Q Consensus       193 ~y-~~k~~~~~~~~~~~~~---~~~~~~i~Rp~~i~G~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~  267 (355)
                      .| .+|...+.....+..+   .++++..+.||.+-.+....... ...........     .....+...+|+++.+++
T Consensus       156 ~Y~~sKaa~~~~~~~la~e~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~p~~ia~~~~~  230 (253)
T PRK06172        156 IYAASKHAVIGLTKSAAIEYAKKGIRVNAVCPAVIDTDMFRRAYEADPRKAEFAAAM-----HPVGRIGKVEEVASAVLY  230 (253)
T ss_pred             hhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChhhhhhcccChHHHHHHhcc-----CCCCCccCHHHHHHHHHH
Confidence            67 7777666665555443   47999999999886653221100 01111111111     011235789999999999


Q ss_pred             HHhCCC---CCCceEecCCC
Q 018503          268 ALSNPS---YRGVINGTAPN  284 (355)
Q Consensus       268 ~~~~~~---~~~~~~i~~~~  284 (355)
                      ++....   .+..+.+.+|.
T Consensus       231 l~~~~~~~~~G~~i~~dgg~  250 (253)
T PRK06172        231 LCSDGASFTTGHALMVDGGA  250 (253)
T ss_pred             HhCccccCcCCcEEEECCCc
Confidence            998643   33456666653

>PRK07069 short chain dehydrogenase; Validated

Probab=99.65  E-value=3.4e-15  Score=128.87  Aligned_cols=202  Identities=15%  Similarity=0.155  Sum_probs=129.6

Q ss_pred             EEEEEcCCchHHHHHHHHHHhCCCeEEEEecC-CchhhccCC----CC--CCccCCCeeecCCcchhhhc-------CCC
Q 018503           52 TVSVTGATGFIGRRLVQRLQADNHQVRVLTRS-RSKAELIFP----GK--KTRFFPGVMIAEEPQWRDCI-------QGS  117 (355)
Q Consensus        52 ~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~-~~~~~~~~~----~~--~~~~~~~~d~~~~~~~~~~~-------~~~  117 (355)
                      +|+||||+|+||+++++.|+++|++|++++|+ .+.......    ..  .......+|+.|.+++.+++       .++
T Consensus         1 ~ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   80 (251)
T PRK07069          1 RAFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQAADAMGGL   80 (251)
T ss_pred             CEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHHHHHcCCc
Confidence            48999999999999999999999999999998 433222111    00  00012346888888776655       357


Q ss_pred             cEEEECCCCCCC---CCCChhhHHHHHHHhhh----hHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCCCCccccCCCCC
Q 018503          118 TAVVNLAGTPIG---TRWSSEIKKEIKESRIR----VTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPS  190 (355)
Q Consensus       118 d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~----~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~  190 (355)
                      |+|||+||....   .+...+.....+++|+.    ++..+++++.+  .+.+++|++||...  +...         +.
T Consensus        81 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~~~~~ii~~ss~~~--~~~~---------~~  147 (251)
T PRK07069         81 SVLVNNAGVGSFGAIEQIELDEWRRVMAINVESIFLGCKHALPYLRA--SQPASIVNISSVAA--FKAE---------PD  147 (251)
T ss_pred             cEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhh--cCCcEEEEecChhh--ccCC---------CC
Confidence            999999997532   22234455677888988    66777777766  56679999999766  4321         22


Q ss_pred             CChh-HHHHHHHHHHHHhcc-----CCCCeEEEEEecEEEeCCCCcccch-H--HHH-HHHhCCCCCCCCcceecccHHH
Q 018503          191 GNDY-LAEVCREWEGTALKV-----NKDVRLALIRIGIVLGKDGGALAKM-I--PLF-MMFAGGPLGSGQQWFSWIHLDD  260 (355)
Q Consensus       191 ~~~y-~~k~~~~~~~~~~~~-----~~~~~~~i~Rp~~i~G~~~~~~~~~-~--~~~-~~~~~~~~~~~~~~~~~i~v~D  260 (355)
                      ...| .+|...+...+.+..     ..+++++.++|+.+.++........ .  ... ....+.      ....+.+.+|
T Consensus       148 ~~~Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~  221 (251)
T PRK07069        148 YTAYNASKAAVASLTKSIALDCARRGLDVRCNSIHPTFIRTGIVDPIFQRLGEEEATRKLARGV------PLGRLGEPDD  221 (251)
T ss_pred             CchhHHHHHHHHHHHHHHHHHhcccCCcEEEEEEeecccCCcchhHHhhhccchhHHHHHhccC------CCCCCcCHHH
Confidence            3457 667655555443322     2358899999999988753211000 0  001 111111      1123568999


Q ss_pred             HHHHHHHHHhCC
Q 018503          261 IVNLIYEALSNP  272 (355)
Q Consensus       261 va~~~~~~~~~~  272 (355)
                      +|++++.++..+
T Consensus       222 va~~~~~l~~~~  233 (251)
T PRK07069        222 VAHAVLYLASDE  233 (251)
T ss_pred             HHHHHHHHcCcc
Confidence            999999987754

>PRK07904 short chain dehydrogenase; Provisional

Probab=99.65  E-value=6.3e-15  Score=127.21  Aligned_cols=194  Identities=13%  Similarity=0.096  Sum_probs=126.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCC-CeEEEEecCCch-hhc----cCCCCC-CccCCCeeecCCcchhhhc------C
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADN-HQVRVLTRSRSK-AEL----IFPGKK-TRFFPGVMIAEEPQWRDCI------Q  115 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~-~~~----~~~~~~-~~~~~~~d~~~~~~~~~~~------~  115 (355)
                      ..++|+||||+|.||++++++|+++| ++|++++|+.+. ...    +..... ......+|+.|.+++.+++      .
T Consensus         7 ~~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~g   86 (253)
T PRK07904          7 NPQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTDSHPKVIDAAFAGG   86 (253)
T ss_pred             CCcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChHHHHHHHHHHHhcC
Confidence            45789999999999999999999995 999999998765 221    111110 1113457888887755444      2


Q ss_pred             CCcEEEECCCCCCCC--CC-ChhhHHHHHHHhhhhHHH----HHHHHHcCCCCCCcEEEEeeeeeeeeCCCCCccccCCC
Q 018503          116 GSTAVVNLAGTPIGT--RW-SSEIKKEIKESRIRVTSK----VVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESS  188 (355)
Q Consensus       116 ~~d~vi~~a~~~~~~--~~-~~~~~~~~~~~n~~~~~~----l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~  188 (355)
                      ++|++||++|.....  .+ ......+.+++|+.++..    +++.+.+  .+..++|++||...  +..         .
T Consensus        87 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~--~~~~~iv~isS~~g--~~~---------~  153 (253)
T PRK07904         87 DVDVAIVAFGLLGDAEELWQNQRKAVQIAEINYTAAVSVGVLLGEKMRA--QGFGQIIAMSSVAG--ERV---------R  153 (253)
T ss_pred             CCCEEEEeeecCCchhhcccCHHHHHHHHHHHhHhHHHHHHHHHHHHHh--cCCceEEEEechhh--cCC---------C
Confidence            699999999874321  12 112223568899988766    4555555  56789999999754  221         1


Q ss_pred             CCCChh-HHHHHHHHHHHHh---ccCCCCeEEEEEecEEEeCCCCcccchHHHHHHHhCCCCCCCCcceecccHHHHHHH
Q 018503          189 PSGNDY-LAEVCREWEGTAL---KVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNL  264 (355)
Q Consensus       189 ~~~~~y-~~k~~~~~~~~~~---~~~~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~  264 (355)
                      +....| .+|.....+...+   ....++++++++||.+..+.....          ..      .  ...+..+|+|+.
T Consensus       154 ~~~~~Y~~sKaa~~~~~~~l~~el~~~~i~v~~v~Pg~v~t~~~~~~----------~~------~--~~~~~~~~~A~~  215 (253)
T PRK07904        154 RSNFVYGSTKAGLDGFYLGLGEALREYGVRVLVVRPGQVRTRMSAHA----------KE------A--PLTVDKEDVAKL  215 (253)
T ss_pred             CCCcchHHHHHHHHHHHHHHHHHHhhcCCEEEEEeeCceecchhccC----------CC------C--CCCCCHHHHHHH
Confidence            223446 6665544332222   223589999999999987532110          00      0  114789999999


Q ss_pred             HHHHHhCCC
Q 018503          265 IYEALSNPS  273 (355)
Q Consensus       265 ~~~~~~~~~  273 (355)
                      ++..+.++.
T Consensus       216 i~~~~~~~~  224 (253)
T PRK07904        216 AVTAVAKGK  224 (253)
T ss_pred             HHHHHHcCC
Confidence            999998764

>PRK08589 short chain dehydrogenase; Validated

Probab=99.65  E-value=6.5e-15  Score=128.64  Aligned_cols=222  Identities=14%  Similarity=0.050  Sum_probs=138.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccC----CCCCCccCCCeeecCCcchhhhcC-------CC
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIF----PGKKTRFFPGVMIAEEPQWRDCIQ-------GS  117 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~~~~~~~~~~~d~~~~~~~~~~~~-------~~  117 (355)
                      +++++|||||+|.||+++++.|+++|++|++++|+ +......    ..........+|+.+++++.++++       .+
T Consensus         5 ~~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~i   83 (272)
T PRK08589          5 ENKVAVITGASTGIGQASAIALAQEGAYVLAVDIA-EAVSETVDKIKSNGGKAKAYHVDISDEQQVKDFASEIKEQFGRV   83 (272)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc-HHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHHHcCCc
Confidence            35789999999999999999999999999999998 4332211    111111134578888887766553       57


Q ss_pred             cEEEECCCCCCC----CCCChhhHHHHHHHhhhhHHHHHHHHHcC--CCCCCcEEEEeeeeeeeeCCCCCccccCCCCCC
Q 018503          118 TAVVNLAGTPIG----TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSG  191 (355)
Q Consensus       118 d~vi~~a~~~~~----~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~  191 (355)
                      |++||+||....    .....+.....+++|+.++..+++++...  ..+ .++|++||...  +..         .+..
T Consensus        84 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-g~iv~isS~~~--~~~---------~~~~  151 (272)
T PRK08589         84 DVLFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLMTKMLLPLMMEQG-GSIINTSSFSG--QAA---------DLYR  151 (272)
T ss_pred             CEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CEEEEeCchhh--cCC---------CCCC
Confidence            999999997421    12344566788889999887776654431  133 68999999765  321         1223


Q ss_pred             Chh-HHHHHHHHHHHHhcc---CCCCeEEEEEecEEEeCCCCcccch-HHHH-HHHhCCCCCCCCcceecccHHHHHHHH
Q 018503          192 NDY-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALAKM-IPLF-MMFAGGPLGSGQQWFSWIHLDDIVNLI  265 (355)
Q Consensus       192 ~~y-~~k~~~~~~~~~~~~---~~~~~~~i~Rp~~i~G~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~i~v~Dva~~~  265 (355)
                      ..| .+|...+.+...+..   ..|++++.+.||.+..+........ .... ....... ........+...+|+|+++
T Consensus       152 ~~Y~asKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~va~~~  230 (272)
T PRK08589        152 SGYNAAKGAVINFTKSIAIEYGRDGIRANAIAPGTIETPLVDKLTGTSEDEAGKTFRENQ-KWMTPLGRLGKPEEVAKLV  230 (272)
T ss_pred             chHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCchhhhhcccchhhHHHHHhhhh-hccCCCCCCcCHHHHHHHH
Confidence            567 777766666555543   3489999999999876532111000 0000 0000000 0000111257899999999


Q ss_pred             HHHHhCCC---CCCceEecCCC
Q 018503          266 YEALSNPS---YRGVINGTAPN  284 (355)
Q Consensus       266 ~~~~~~~~---~~~~~~i~~~~  284 (355)
                      +.++....   .+..+.+.++.
T Consensus       231 ~~l~s~~~~~~~G~~i~vdgg~  252 (272)
T PRK08589        231 VFLASDDSSFITGETIRIDGGV  252 (272)
T ss_pred             HHHcCchhcCcCCCEEEECCCc
Confidence            99987543   23356665553

>PRK05867 short chain dehydrogenase; Provisional

Probab=99.64  E-value=7.4e-15  Score=126.96  Aligned_cols=219  Identities=14%  Similarity=0.065  Sum_probs=141.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCC----CCCccCCCeeecCCcchhhhcC-------CC
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG----KKTRFFPGVMIAEEPQWRDCIQ-------GS  117 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~----~~~~~~~~~d~~~~~~~~~~~~-------~~  117 (355)
                      ..++++||||+|.||++++++|+++|++|++++|+.+........    ........+|+.|++++.++++       .+
T Consensus         8 ~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   87 (253)
T PRK05867          8 HGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQHQQVTSMLDQVTAELGGI   87 (253)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            347899999999999999999999999999999987654332111    1111133578888887766653       68


Q ss_pred             cEEEECCCCCCC---CCCChhhHHHHHHHhhhhHHHHHHHHHcC--CCC-CCcEEEEeeeeeeeeCCCCCccccCCCCCC
Q 018503          118 TAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEG-VRPSVLVSATALGYYGTSETEVFDESSPSG  191 (355)
Q Consensus       118 d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~-~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~  191 (355)
                      |++||+||....   .....+.....+++|+.++..+++++...  ..+ ..++|++||.... ....        ....
T Consensus        88 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~-~~~~--------~~~~  158 (253)
T PRK05867         88 DIAVCNAGIITVTPMLDMPLEEFQRLQNTNVTGVFLTAQAAAKAMVKQGQGGVIINTASMSGH-IINV--------PQQV  158 (253)
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCcEEEEECcHHhc-CCCC--------CCCc
Confidence            999999997432   12345566778899999999888876431  122 3468888876431 0100        0112


Q ss_pred             Chh-HHHHHHHHHHHHhccC---CCCeEEEEEecEEEeCCCCcccchHHHHHHHhCCCCCCCCcceecccHHHHHHHHHH
Q 018503          192 NDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYE  267 (355)
Q Consensus       192 ~~y-~~k~~~~~~~~~~~~~---~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~  267 (355)
                      ..| .+|...+.+...+..+   .|+++..++||.+-.+..........  ......+.      ..+...+|+|++++.
T Consensus       159 ~~Y~asKaal~~~~~~la~e~~~~gI~vn~i~PG~v~t~~~~~~~~~~~--~~~~~~~~------~r~~~p~~va~~~~~  230 (253)
T PRK05867        159 SHYCASKAAVIHLTKAMAVELAPHKIRVNSVSPGYILTELVEPYTEYQP--LWEPKIPL------GRLGRPEELAGLYLY  230 (253)
T ss_pred             cchHHHHHHHHHHHHHHHHHHhHhCeEEEEeecCCCCCcccccchHHHH--HHHhcCCC------CCCcCHHHHHHHHHH
Confidence            457 7777666665555433   48999999999997664322111111  11111121      136789999999999


Q ss_pred             HHhCCC---CCCceEecCCC
Q 018503          268 ALSNPS---YRGVINGTAPN  284 (355)
Q Consensus       268 ~~~~~~---~~~~~~i~~~~  284 (355)
                      ++....   .+..+.+.+|.
T Consensus       231 L~s~~~~~~tG~~i~vdgG~  250 (253)
T PRK05867        231 LASEASSYMTGSDIVIDGGY  250 (253)
T ss_pred             HcCcccCCcCCCeEEECCCc
Confidence            997543   34466666553

>PRK06483 dihydromonapterin reductase; Provisional

Probab=99.64  E-value=2.4e-14  Score=122.46  Aligned_cols=214  Identities=14%  Similarity=0.079  Sum_probs=136.8

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhc-------CCCcEEEE
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCI-------QGSTAVVN  122 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~-------~~~d~vi~  122 (355)
                      +++++||||+|.||++++++|+++|++|++++|+++.......... .....+|+.|.+++.+++       .++|++||
T Consensus         2 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~   80 (236)
T PRK06483          2 PAPILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYPAIDGLRQAG-AQCIQADFSTNAGIMAFIDELKQHTDGLRAIIH   80 (236)
T ss_pred             CceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcC-CEEEEcCCCCHHHHHHHHHHHHhhCCCccEEEE
Confidence            4689999999999999999999999999999998754321111000 013457888888776554       24899999


Q ss_pred             CCCCCCC---CCCChhhHHHHHHHhhhhHHHHHHHHHcC--CCC--CCcEEEEeeeeeeeeCCCCCccccCCCCCCChh-
Q 018503          123 LAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEG--VRPSVLVSATALGYYGTSETEVFDESSPSGNDY-  194 (355)
Q Consensus       123 ~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~--~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~~y-  194 (355)
                      +||....   .....+.....+++|+.++..+.+++...  ..+  ..++|++||...  ..         ..+....| 
T Consensus        81 ~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~~~g~iv~~ss~~~--~~---------~~~~~~~Y~  149 (236)
T PRK06483         81 NASDWLAEKPGAPLADVLARMMQIHVNAPYLLNLALEDLLRGHGHAASDIIHITDYVV--EK---------GSDKHIAYA  149 (236)
T ss_pred             CCccccCCCcCccCHHHHHHHHHHcchHHHHHHHHHHHHHHhCCCCCceEEEEcchhh--cc---------CCCCCccHH
Confidence            9996422   12245667888999999988776655441  122  457999988643  11         11224568 


Q ss_pred             HHHHHHHHHHHHhccCC--CCeEEEEEecEEEeCCCCcccchHHHHHHHhCCCCCCCCcceecccHHHHHHHHHHHHhCC
Q 018503          195 LAEVCREWEGTALKVNK--DVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNP  272 (355)
Q Consensus       195 ~~k~~~~~~~~~~~~~~--~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~  272 (355)
                      .+|...+.+...+..+.  ++++..++||.+.-..... .....  ......+++      -+...+|+|+++..++...
T Consensus       150 asKaal~~l~~~~a~e~~~~irvn~v~Pg~~~~~~~~~-~~~~~--~~~~~~~~~------~~~~~~~va~~~~~l~~~~  220 (236)
T PRK06483        150 ASKAALDNMTLSFAAKLAPEVKVNSIAPALILFNEGDD-AAYRQ--KALAKSLLK------IEPGEEEIIDLVDYLLTSC  220 (236)
T ss_pred             HHHHHHHHHHHHHHHHHCCCcEEEEEccCceecCCCCC-HHHHH--HHhccCccc------cCCCHHHHHHHHHHHhcCC
Confidence            78877777666555432  5899999999885332111 11111  111111111      1456899999999999743


Q ss_pred             CC-CCceEecCCC
Q 018503          273 SY-RGVINGTAPN  284 (355)
Q Consensus       273 ~~-~~~~~i~~~~  284 (355)
                      .. +..+.+.+|.
T Consensus       221 ~~~G~~i~vdgg~  233 (236)
T PRK06483        221 YVTGRSLPVDGGR  233 (236)
T ss_pred             CcCCcEEEeCccc
Confidence            33 3366666553

>PRK07677 short chain dehydrogenase; Provisional

Probab=99.64  E-value=2.4e-14  Score=123.67  Aligned_cols=217  Identities=14%  Similarity=0.067  Sum_probs=137.1

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCC----CCCccCCCeeecCCcchhhhc-------CCCcE
Q 018503           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG----KKTRFFPGVMIAEEPQWRDCI-------QGSTA  119 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~----~~~~~~~~~d~~~~~~~~~~~-------~~~d~  119 (355)
                      ++++||||+|.||+++++.|++.|++|++++|+..........    ........+|+.|++++.+++       ..+|+
T Consensus         2 k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   81 (252)
T PRK07677          2 KVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRNPEDVQKMVEQIDEKFGRIDA   81 (252)
T ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCccE
Confidence            6899999999999999999999999999999987644322110    000113456888888776655       35799


Q ss_pred             EEECCCCCCC---CCCChhhHHHHHHHhhhhHHHHHHHHHcC--C-CCCCcEEEEeeeeeeeeCCCCCccccCCCCCCCh
Q 018503          120 VVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--P-EGVRPSVLVSATALGYYGTSETEVFDESSPSGND  193 (355)
Q Consensus       120 vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~-~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~~  193 (355)
                      +||++|....   ...+.+.+...+++|+.++.++++++...  . ....++|++||...  +..         .+....
T Consensus        82 lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~--~~~---------~~~~~~  150 (252)
T PRK07677         82 LINNAAGNFICPAEDLSVNGWNSVIDIVLNGTFYCSQAVGKYWIEKGIKGNIINMVATYA--WDA---------GPGVIH  150 (252)
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCCEEEEEEcChhh--ccC---------CCCCcc
Confidence            9999985322   23455667889999999999999887431  1 22357889887644  221         112234


Q ss_pred             h-HHHHHHHHHHHH----hccCCCCeEEEEEecEEEeCCC-CcccchHHHH-HHHhCCCCCCCCcceecccHHHHHHHHH
Q 018503          194 Y-LAEVCREWEGTA----LKVNKDVRLALIRIGIVLGKDG-GALAKMIPLF-MMFAGGPLGSGQQWFSWIHLDDIVNLIY  266 (355)
Q Consensus       194 y-~~k~~~~~~~~~----~~~~~~~~~~i~Rp~~i~G~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~v~Dva~~~~  266 (355)
                      | .+|...+.+.+.    +...+|+++..++||.+.+... ......-... ......++      ..+...+|+|+++.
T Consensus       151 Y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~PG~v~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~va~~~~  224 (252)
T PRK07677        151 SAAAKAGVLAMTRTLAVEWGRKYGIRVNAIAPGPIERTGGADKLWESEEAAKRTIQSVPL------GRLGTPEEIAGLAY  224 (252)
T ss_pred             hHHHHHHHHHHHHHHHHHhCcccCeEEEEEeecccccccccccccCCHHHHHHHhccCCC------CCCCCHHHHHHHHH
Confidence            6 666655554443    3333589999999999985421 1100000111 11111111      13678899999999


Q ss_pred             HHHhCCC---CCCceEecCCC
Q 018503          267 EALSNPS---YRGVINGTAPN  284 (355)
Q Consensus       267 ~~~~~~~---~~~~~~i~~~~  284 (355)
                      .++....   .+..+.+.++.
T Consensus       225 ~l~~~~~~~~~g~~~~~~gg~  245 (252)
T PRK07677        225 FLLSDEAAYINGTCITMDGGQ  245 (252)
T ss_pred             HHcCccccccCCCEEEECCCe
Confidence            9887543   33356665553

>PRK08226 short chain dehydrogenase; Provisional

Probab=99.63  E-value=1.9e-14  Score=125.16  Aligned_cols=219  Identities=16%  Similarity=0.072  Sum_probs=137.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhc---cCCCCCCccCCCeeecCCcchhhhcC-------CCc
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAEL---IFPGKKTRFFPGVMIAEEPQWRDCIQ-------GST  118 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~---~~~~~~~~~~~~~d~~~~~~~~~~~~-------~~d  118 (355)
                      .+++++||||+|+||++++++|+++|++|++++|+......   ............+|+.+.+++.++++       .+|
T Consensus         5 ~~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id   84 (263)
T PRK08226          5 TGKTALITGALQGIGEGIARVFARHGANLILLDISPEIEKLADELCGRGHRCTAVVADVRDPASVAAAIKRAKEKEGRID   84 (263)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence            34789999999999999999999999999999998642111   11111111134578888887776654       579


Q ss_pred             EEEECCCCCCC---CCCChhhHHHHHHHhhhhHHHHHHHHHcC--CCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCCh
Q 018503          119 AVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGND  193 (355)
Q Consensus       119 ~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~~  193 (355)
                      +|||+||....   .....+..+..++.|+.++..+++++...  ..+.+++|++||.... +.         ..+....
T Consensus        85 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~-~~---------~~~~~~~  154 (263)
T PRK08226         85 ILVNNAGVCRLGSFLDMSDEDRDFHIDINIKGVWNVTKAVLPEMIARKDGRIVMMSSVTGD-MV---------ADPGETA  154 (263)
T ss_pred             EEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhc-cc---------CCCCcch
Confidence            99999997432   23344556778899999999888876531  1345689999886431 00         0112345


Q ss_pred             h-HHHHHHHHHHHHhccC---CCCeEEEEEecEEEeCCCCcc------cchHHHH-HHHhCCCCCCCCcceecccHHHHH
Q 018503          194 Y-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGAL------AKMIPLF-MMFAGGPLGSGQQWFSWIHLDDIV  262 (355)
Q Consensus       194 y-~~k~~~~~~~~~~~~~---~~~~~~i~Rp~~i~G~~~~~~------~~~~~~~-~~~~~~~~~~~~~~~~~i~v~Dva  262 (355)
                      | .+|...+...+.+..+   .+++++.++||.+.++.....      ....... ....+.+.      ..+...+|+|
T Consensus       155 Y~~sK~a~~~~~~~la~~~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~p~------~~~~~~~~va  228 (263)
T PRK08226        155 YALTKAAIVGLTKSLAVEYAQSGIRVNAICPGYVRTPMAESIARQSNPEDPESVLTEMAKAIPL------RRLADPLEVG  228 (263)
T ss_pred             HHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccCHHHHhhhhhccCCCcHHHHHHHhccCCC------CCCCCHHHHH
Confidence            6 6776665555544432   489999999999987632110      0000111 11111121      2357899999


Q ss_pred             HHHHHHHhCCC--CCC-ceEecCC
Q 018503          263 NLIYEALSNPS--YRG-VINGTAP  283 (355)
Q Consensus       263 ~~~~~~~~~~~--~~~-~~~i~~~  283 (355)
                      +++..++....  ..| .+.+.+|
T Consensus       229 ~~~~~l~~~~~~~~~g~~i~~dgg  252 (263)
T PRK08226        229 ELAAFLASDESSYLTGTQNVIDGG  252 (263)
T ss_pred             HHHHHHcCchhcCCcCceEeECCC
Confidence            99999886532  233 4555544

>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional

Probab=99.63  E-value=1e-14  Score=127.10  Aligned_cols=216  Identities=13%  Similarity=0.056  Sum_probs=138.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcC-------CCcEEE
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ-------GSTAVV  121 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-------~~d~vi  121 (355)
                      +.++++||||+|+||+++++.|+++|++|++++|+.........     ....+|+.|++++.++++       .+|++|
T Consensus         8 ~~k~vlItG~s~gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~~-----~~~~~D~~~~~~~~~~~~~~~~~~g~id~li   82 (266)
T PRK06171          8 QGKIIIVTGGSSGIGLAIVKELLANGANVVNADIHGGDGQHENY-----QFVPTDVSSAEEVNHTVAEIIEKFGRIDGLV   82 (266)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCccccccCce-----EEEEccCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            34789999999999999999999999999999998765332111     134578888887776553       579999


Q ss_pred             ECCCCCCC------------CCCChhhHHHHHHHhhhhHHHHHHHHHcC--CCCCCcEEEEeeeeeeeeCCCCCccccCC
Q 018503          122 NLAGTPIG------------TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDES  187 (355)
Q Consensus       122 ~~a~~~~~------------~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~  187 (355)
                      |+||....            .....+.++..+++|+.++..+++++...  ..+..++|++||...  +..         
T Consensus        83 ~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~--~~~---------  151 (266)
T PRK06171         83 NNAGINIPRLLVDEKDPAGKYELNEAAFDKMFNINQKGVFLMSQAVARQMVKQHDGVIVNMSSEAG--LEG---------  151 (266)
T ss_pred             ECCcccCCccccccccccccccCCHHHHHHHHhhhchhHHHHHHHHHHHHHhcCCcEEEEEccccc--cCC---------
Confidence            99996321            12355667889999999999998887642  124457999998765  221         


Q ss_pred             CCCCChh-HHHHHHHHHHHHhcc---CCCCeEEEEEecEEEeCCC-C-cccch--------HHHH-HHHhCCCCCCCCcc
Q 018503          188 SPSGNDY-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDG-G-ALAKM--------IPLF-MMFAGGPLGSGQQW  252 (355)
Q Consensus       188 ~~~~~~y-~~k~~~~~~~~~~~~---~~~~~~~i~Rp~~i~G~~~-~-~~~~~--------~~~~-~~~~~~~~~~~~~~  252 (355)
                      .+....| .+|...+.+.+.+..   ..|+++..++||.+..... . .....        .... ......   .....
T Consensus       152 ~~~~~~Y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~p~  228 (266)
T PRK06171        152 SEGQSCYAATKAALNSFTRSWAKELGKHNIRVVGVAPGILEATGLRTPEYEEALAYTRGITVEQLRAGYTKT---STIPL  228 (266)
T ss_pred             CCCCchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeccccccCCCcChhhhhhhccccCCCHHHHHhhhccc---ccccC
Confidence            1223567 667665555544433   2489999999998852211 1 00000        0000 000000   00111


Q ss_pred             eecccHHHHHHHHHHHHhCCC---CCCceEecCC
Q 018503          253 FSWIHLDDIVNLIYEALSNPS---YRGVINGTAP  283 (355)
Q Consensus       253 ~~~i~v~Dva~~~~~~~~~~~---~~~~~~i~~~  283 (355)
                      ..+...+|+|+++..++....   .+..+++.+|
T Consensus       229 ~r~~~~~eva~~~~fl~s~~~~~itG~~i~vdgg  262 (266)
T PRK06171        229 GRSGKLSEVADLVCYLLSDRASYITGVTTNIAGG  262 (266)
T ss_pred             CCCCCHHHhhhheeeeeccccccceeeEEEecCc
Confidence            236788999999999987543   2335555554

>PRK07097 gluconate 5-dehydrogenase; Provisional

Probab=99.63  E-value=2.1e-14  Score=124.94  Aligned_cols=218  Identities=13%  Similarity=0.073  Sum_probs=141.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCC----CCCCccCCCeeecCCcchhhhcC-------CC
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP----GKKTRFFPGVMIAEEPQWRDCIQ-------GS  117 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~~d~~~~~~~~~~~~-------~~  117 (355)
                      ..++++||||+|.||.+++++|+++|++|+++.|+.+.......    .........+|+.|.+++.+++.       .+
T Consensus         9 ~~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   88 (265)
T PRK07097          9 KGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYRELGIEAHGYVCDVTDEDGVQAMVSQIEKEVGVI   88 (265)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCCCC
Confidence            34689999999999999999999999999999998765432211    01011134578888888776663       48


Q ss_pred             cEEEECCCCCCC---CCCChhhHHHHHHHhhhhHHHHHHHHHcC--CCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCC
Q 018503          118 TAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGN  192 (355)
Q Consensus       118 d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~  192 (355)
                      |++||+||....   .....+.....+++|+.++..+.+++...  ..+.+++|++||.... ++.          +...
T Consensus        89 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~-~~~----------~~~~  157 (265)
T PRK07097         89 DILVNNAGIIKRIPMLEMSAEDFRQVIDIDLNAPFIVSKAVIPSMIKKGHGKIINICSMMSE-LGR----------ETVS  157 (265)
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCcEEEEEcCcccc-CCC----------CCCc
Confidence            999999997532   23455667888899999988777665431  1356789999986542 331          2234


Q ss_pred             hh-HHHHHHHHHHHHhccC---CCCeEEEEEecEEEeCCCCcccc------hHHHHHHH-hCCCCCCCCcceecccHHHH
Q 018503          193 DY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAK------MIPLFMMF-AGGPLGSGQQWFSWIHLDDI  261 (355)
Q Consensus       193 ~y-~~k~~~~~~~~~~~~~---~~~~~~i~Rp~~i~G~~~~~~~~------~~~~~~~~-~~~~~~~~~~~~~~i~v~Dv  261 (355)
                      .| .+|...+.+...+..+   .|++++.++||.+..+.......      ..+..... ...+      ...+...+|+
T Consensus       158 ~Y~~sKaal~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~dv  231 (265)
T PRK07097        158 AYAAAKGGLKMLTKNIASEYGEANIQCNGIGPGYIATPQTAPLRELQADGSRHPFDQFIIAKTP------AARWGDPEDL  231 (265)
T ss_pred             cHHHHHHHHHHHHHHHHHHhhhcCceEEEEEeccccccchhhhhhccccccchhHHHHHHhcCC------ccCCcCHHHH
Confidence            57 7776666555554443   48999999999998874321110      00010101 1111      1236778999


Q ss_pred             HHHHHHHHhCCC--CCC-ceEecCC
Q 018503          262 VNLIYEALSNPS--YRG-VINGTAP  283 (355)
Q Consensus       262 a~~~~~~~~~~~--~~~-~~~i~~~  283 (355)
                      |..++.++....  ..| .+.+.++
T Consensus       232 a~~~~~l~~~~~~~~~g~~~~~~gg  256 (265)
T PRK07097        232 AGPAVFLASDASNFVNGHILYVDGG  256 (265)
T ss_pred             HHHHHHHhCcccCCCCCCEEEECCC
Confidence            999999998643  233 5555554

>PRK09072 short chain dehydrogenase; Provisional

Probab=99.63  E-value=9.5e-15  Score=127.02  Aligned_cols=201  Identities=16%  Similarity=0.145  Sum_probs=131.5

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCC---CCCccCCCeeecCCcchhhhc------CCCcEE
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG---KKTRFFPGVMIAEEPQWRDCI------QGSTAV  120 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~---~~~~~~~~~d~~~~~~~~~~~------~~~d~v  120 (355)
                      +++|+||||+|+||.+++++|+++|++|++++|+.+........   ........+|+.|.+++.+++      ..+|++
T Consensus         5 ~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~id~l   84 (263)
T PRK09072          5 DKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARLPYPGRHRWVVADLTSEAGREAVLARAREMGGINVL   84 (263)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHhcCCCCEE
Confidence            46899999999999999999999999999999987654332111   001113357888888776554      357999


Q ss_pred             EECCCCCCC---CCCChhhHHHHHHHhhhhHHHHHHHHHcC--CCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCChh-
Q 018503          121 VNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-  194 (355)
Q Consensus       121 i~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~~y-  194 (355)
                      ||+||....   .....+.....+++|+.++..+++++...  ..+.+++|++||.... ++.          +....| 
T Consensus        85 v~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~-~~~----------~~~~~Y~  153 (263)
T PRK09072         85 INNAGVNHFALLEDQDPEAIERLLALNLTAPMQLTRALLPLLRAQPSAMVVNVGSTFGS-IGY----------PGYASYC  153 (263)
T ss_pred             EECCCCCCccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEecChhhC-cCC----------CCccHHH
Confidence            999997432   22345566788899999999888877531  1334678888886541 221          123456 


Q ss_pred             HHHHHHHHHHHHhcc---CCCCeEEEEEecEEEeCCCCcccchHHHHHHHhCCCCCCCCcceecccHHHHHHHHHHHHhC
Q 018503          195 LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSN  271 (355)
Q Consensus       195 ~~k~~~~~~~~~~~~---~~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~  271 (355)
                      .+|.....+...+..   ..++.++.+.|+.+..+.....   .        .... ......+...+|+|++++.++++
T Consensus       154 ~sK~a~~~~~~~l~~~~~~~~i~v~~v~Pg~~~t~~~~~~---~--------~~~~-~~~~~~~~~~~~va~~i~~~~~~  221 (263)
T PRK09072        154 ASKFALRGFSEALRRELADTGVRVLYLAPRATRTAMNSEA---V--------QALN-RALGNAMDDPEDVAAAVLQAIEK  221 (263)
T ss_pred             HHHHHHHHHHHHHHHHhcccCcEEEEEecCcccccchhhh---c--------cccc-ccccCCCCCHHHHHHHHHHHHhC
Confidence            666654444443332   3479999999998865431110   0        0000 00011367889999999999997


Q ss_pred             CC
Q 018503          272 PS  273 (355)
Q Consensus       272 ~~  273 (355)
                      +.
T Consensus       222 ~~  223 (263)
T PRK09072        222 ER  223 (263)
T ss_pred             CC
Confidence            63

>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.63  E-value=4e-14  Score=122.18  Aligned_cols=218  Identities=13%  Similarity=0.001  Sum_probs=138.9

Q ss_pred             CCCEEEEEcCC--chHHHHHHHHHHhCCCeEEEEecCCchhhccCCCC-CCccCCCeeecCCcchhhhc-------CCCc
Q 018503           49 SQMTVSVTGAT--GFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGK-KTRFFPGVMIAEEPQWRDCI-------QGST  118 (355)
Q Consensus        49 ~~~~IlVtGat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~-------~~~d  118 (355)
                      +.++++||||+  +.||++++++|+++|++|++.+|+........... .......+|+.|++++.+++       ..+|
T Consensus         6 ~~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD   85 (252)
T PRK06079          6 SGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQNDRMKKSLQKLVDEEDLLVECDVASDESIERAFATIKERVGKID   85 (252)
T ss_pred             CCCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCchHHHHHHHhhccCceeEEeCCCCCHHHHHHHHHHHHHHhCCCC
Confidence            45789999999  79999999999999999999998743221111110 01113457999888776655       3589


Q ss_pred             EEEECCCCCCC-------CCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCCCCccccCCCCCC
Q 018503          119 AVVNLAGTPIG-------TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSG  191 (355)
Q Consensus       119 ~vi~~a~~~~~-------~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~  191 (355)
                      ++||+||....       .+...+.+...+++|+.++..+++++...-....++|++||...  ...         .+..
T Consensus        86 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~~~g~Iv~iss~~~--~~~---------~~~~  154 (252)
T PRK06079         86 GIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYARPLLNPGASIVTLTYFGS--ERA---------IPNY  154 (252)
T ss_pred             EEEEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHHHHHHhcccCceEEEEeccCc--ccc---------CCcc
Confidence            99999996421       23345667888999999998888877552122367999988654  110         1223


Q ss_pred             Chh-HHHHHHHHHHHHhccC---CCCeEEEEEecEEEeCCCCcccchHHHHHHH-hCCCCCCCCcceecccHHHHHHHHH
Q 018503          192 NDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMF-AGGPLGSGQQWFSWIHLDDIVNLIY  266 (355)
Q Consensus       192 ~~y-~~k~~~~~~~~~~~~~---~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~v~Dva~~~~  266 (355)
                      ..| .+|.....+.+.+..+   .|+++..+.||.+-.+............+.. ...+.      ..+...+|+|+++.
T Consensus       155 ~~Y~asKaal~~l~~~la~el~~~gI~vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~------~r~~~pedva~~~~  228 (252)
T PRK06079        155 NVMGIAKAALESSVRYLARDLGKKGIRVNAISAGAVKTLAVTGIKGHKDLLKESDSRTVD------GVGVTIEEVGNTAA  228 (252)
T ss_pred             hhhHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccccccccCCChHHHHHHHHhcCcc------cCCCCHHHHHHHHH
Confidence            457 7777666655544442   4899999999999765321110000111111 11111      23678899999999


Q ss_pred             HHHhCCC---CCCceEecCC
Q 018503          267 EALSNPS---YRGVINGTAP  283 (355)
Q Consensus       267 ~~~~~~~---~~~~~~i~~~  283 (355)
                      .++....   .+.++.+.++
T Consensus       229 ~l~s~~~~~itG~~i~vdgg  248 (252)
T PRK06079        229 FLLSDLSTGVTGDIIYVDKG  248 (252)
T ss_pred             HHhCcccccccccEEEeCCc
Confidence            9997643   3335555444

>PRK07576 short chain dehydrogenase; Provisional

Probab=99.62  E-value=2.4e-14  Score=124.52  Aligned_cols=215  Identities=17%  Similarity=0.118  Sum_probs=137.7

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccC----CCCCCccCCCeeecCCcchhhhcC-------CCc
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIF----PGKKTRFFPGVMIAEEPQWRDCIQ-------GST  118 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~~~~~~~~~~~d~~~~~~~~~~~~-------~~d  118 (355)
                      .++|+||||+|.||.+++++|++.|++|++++|+.+......    ..........+|+.+++++.++++       ++|
T Consensus         9 ~k~ilItGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~~~iD   88 (264)
T PRK07576          9 GKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRDYAAVEAAFAQIADEFGPID   88 (264)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence            468999999999999999999999999999999876543221    100000133578888887776653       579


Q ss_pred             EEEECCCCCCC---CCCChhhHHHHHHHhhhhHHHHHHHHHcC-CCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCChh
Q 018503          119 AVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES-PEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY  194 (355)
Q Consensus       119 ~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~~y  194 (355)
                      ++||+|+....   .....+.....+++|+.++.++++++... ....++++++||...  +..         .+....|
T Consensus        89 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~~g~iv~iss~~~--~~~---------~~~~~~Y  157 (264)
T PRK07576         89 VLVSGAAGNFPAPAAGMSANGFKTVVDIDLLGTFNVLKAAYPLLRRPGASIIQISAPQA--FVP---------MPMQAHV  157 (264)
T ss_pred             EEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCEEEEECChhh--ccC---------CCCccHH
Confidence            99999985321   23345566788899999999998877542 112358999998654  211         1234557


Q ss_pred             -HHHHHHHHHHHHhccC---CCCeEEEEEecEEEeCCCCcccchHH--HH--HHHhCCCCCCCCcceecccHHHHHHHHH
Q 018503          195 -LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIP--LF--MMFAGGPLGSGQQWFSWIHLDDIVNLIY  266 (355)
Q Consensus       195 -~~k~~~~~~~~~~~~~---~~~~~~i~Rp~~i~G~~~~~~~~~~~--~~--~~~~~~~~~~~~~~~~~i~v~Dva~~~~  266 (355)
                       .+|...+.+...+..+   .+++++.++|+.+.+....  ..+.+  ..  ......+      ...+...+|+|++++
T Consensus       158 ~asK~a~~~l~~~la~e~~~~gi~v~~v~pg~~~~t~~~--~~~~~~~~~~~~~~~~~~------~~~~~~~~dva~~~~  229 (264)
T PRK07576        158 CAAKAGVDMLTRTLALEWGPEGIRVNSIVPGPIAGTEGM--ARLAPSPELQAAVAQSVP------LKRNGTKQDIANAAL  229 (264)
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCeEEEEEecccccCcHHH--hhcccCHHHHHHHHhcCC------CCCCCCHHHHHHHHH
Confidence             6776665555544332   4799999999988753210  00100  00  1111111      233678899999999


Q ss_pred             HHHhCCC--CCC-ceEecCC
Q 018503          267 EALSNPS--YRG-VINGTAP  283 (355)
Q Consensus       267 ~~~~~~~--~~~-~~~i~~~  283 (355)
                      .++..+.  ..| .+.+.++
T Consensus       230 ~l~~~~~~~~~G~~~~~~gg  249 (264)
T PRK07576        230 FLASDMASYITGVVLPVDGG  249 (264)
T ss_pred             HHcChhhcCccCCEEEECCC
Confidence            9997543  234 4455554

>PRK12367 short chain dehydrogenase; Provisional

Probab=99.62  E-value=4.8e-14  Score=120.76  Aligned_cols=189  Identities=14%  Similarity=0.115  Sum_probs=123.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcCCCcEEEECCCCCC
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTPI  128 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~~~  128 (355)
                      ++++++||||+|+||++++++|+++|++|++++|+............ .....+|+.|.+++.+.+.++|++|||||...
T Consensus        13 ~~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~~~~~~~~~~~~-~~~~~~D~~~~~~~~~~~~~iDilVnnAG~~~   91 (245)
T PRK12367         13 QGKRIGITGASGALGKALTKAFRAKGAKVIGLTHSKINNSESNDESP-NEWIKWECGKEESLDKQLASLDVLILNHGINP   91 (245)
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCchhhhhhhccCC-CeEEEeeCCCHHHHHHhcCCCCEEEECCccCC
Confidence            45789999999999999999999999999999998622111111100 01345788888888888889999999999743


Q ss_pred             CCCCChhhHHHHHHHhhhhHHHHHHHHHcC--CC---CCCcEEEEeeeeeeeeCCCCCccccCCCCCCChh-HHHHHHHH
Q 018503          129 GTRWSSEIKKEIKESRIRVTSKVVDLINES--PE---GVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-LAEVCREW  202 (355)
Q Consensus       129 ~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~---~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~~y-~~k~~~~~  202 (355)
                      ....+.+++...+++|+.++..+++++...  ..   +...++..||.+.  +..          +..+.| .+|.....
T Consensus        92 ~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~g~~iiv~ss~a~--~~~----------~~~~~Y~aSKaal~~  159 (245)
T PRK12367         92 GGRQDPENINKALEINALSSWRLLELFEDIALNNNSQIPKEIWVNTSEAE--IQP----------ALSPSYEISKRLIGQ  159 (245)
T ss_pred             cCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccCCCeEEEEEecccc--cCC----------CCCchhHHHHHHHHH
Confidence            334556778899999999999999876542  11   1222333343322  210          123457 77765432


Q ss_pred             HH---HHh---ccCCCCeEEEEEecEEEeCCCCcccchHHHHHHHhCCCCCCCCcceecccHHHHHHHHHHHHhCCC
Q 018503          203 EG---TAL---KVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPS  273 (355)
Q Consensus       203 ~~---~~~---~~~~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~  273 (355)
                      ..   ...   ....++.+..+.|+.+..+..                +       ...+..+|+|+.++.++.++.
T Consensus       160 ~~~l~~~l~~e~~~~~i~v~~~~pg~~~t~~~----------------~-------~~~~~~~~vA~~i~~~~~~~~  213 (245)
T PRK12367        160 LVSLKKNLLDKNERKKLIIRKLILGPFRSELN----------------P-------IGIMSADFVAKQILDQANLGL  213 (245)
T ss_pred             HHHHHHHHHHhhcccccEEEEecCCCcccccC----------------c-------cCCCCHHHHHHHHHHHHhcCC
Confidence            22   111   123577777777776532210                0       114788999999999998764

>PRK06484 short chain dehydrogenase; Validated

Probab=99.62  E-value=1.4e-14  Score=138.28  Aligned_cols=219  Identities=16%  Similarity=0.093  Sum_probs=146.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCC-CCCccCCCeeecCCcchhhhcC-------CCcEE
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-KKTRFFPGVMIAEEPQWRDCIQ-------GSTAV  120 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~-------~~d~v  120 (355)
                      .+++++||||+|.||.+++++|+++|++|++++|+.+....+... ........+|+.|++++.++++       .+|++
T Consensus       268 ~~k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l  347 (520)
T PRK06484        268 SPRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEALGDEHLSVQADITDEAAVESAFAQIQARWGRLDVL  347 (520)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            457999999999999999999999999999999987654433211 1111134578989888776663       58999


Q ss_pred             EECCCCCCC----CCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCChh-H
Q 018503          121 VNLAGTPIG----TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-L  195 (355)
Q Consensus       121 i~~a~~~~~----~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~~y-~  195 (355)
                      |||||....    ...+.+.++..+++|+.++..+++++...-.+..++|++||...  +..         .+....| .
T Consensus       348 i~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~iv~isS~~~--~~~---------~~~~~~Y~a  416 (520)
T PRK06484        348 VNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQGGVIVNLGSIAS--LLA---------LPPRNAYCA  416 (520)
T ss_pred             EECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhccCCEEEEECchhh--cCC---------CCCCchhHH
Confidence            999997421    23345667889999999999998887652123468999999765  221         1234567 7


Q ss_pred             HHHHHHHHHHHhccC---CCCeEEEEEecEEEeCCCCcccch-HHHH-HHHhCCCCCCCCcceecccHHHHHHHHHHHHh
Q 018503          196 AEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKM-IPLF-MMFAGGPLGSGQQWFSWIHLDDIVNLIYEALS  270 (355)
Q Consensus       196 ~k~~~~~~~~~~~~~---~~~~~~i~Rp~~i~G~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~  270 (355)
                      +|...+.+.+.+..+   .|++++.+.||.+..+........ .... ......+.      ..+...+|+|++++.++.
T Consensus       417 sKaal~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~dia~~~~~l~s  490 (520)
T PRK06484        417 SKAAVTMLSRSLACEWAPAGIRVNTVAPGYIETPAVLALKASGRADFDSIRRRIPL------GRLGDPEEVAEAIAFLAS  490 (520)
T ss_pred             HHHHHHHHHHHHHHHhhhhCeEEEEEEeCCccCchhhhhccccHHHHHHHHhcCCC------CCCcCHHHHHHHHHHHhC
Confidence            787777666655443   489999999999987642211000 0001 11111121      125788999999999997


Q ss_pred             CCC---CCCceEecCCC
Q 018503          271 NPS---YRGVINGTAPN  284 (355)
Q Consensus       271 ~~~---~~~~~~i~~~~  284 (355)
                      ...   .+..+.+.+|.
T Consensus       491 ~~~~~~~G~~i~vdgg~  507 (520)
T PRK06484        491 PAASYVNGATLTVDGGW  507 (520)
T ss_pred             ccccCccCcEEEECCCc
Confidence            543   34466666553

>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated

Probab=99.62  E-value=4.1e-14  Score=122.28  Aligned_cols=207  Identities=11%  Similarity=0.041  Sum_probs=135.1

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchh--hccCCCCCCccCCCeeecCCcchhhhcC-------CCcEE
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKA--ELIFPGKKTRFFPGVMIAEEPQWRDCIQ-------GSTAV  120 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~--~~~~~~~~~~~~~~~d~~~~~~~~~~~~-------~~d~v  120 (355)
                      +++++||||+|.||++++++|++.|++|++++++....  ..+...........+|+.|.+++.++++       ++|++
T Consensus        10 ~k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~D~l   89 (253)
T PRK08993         10 GKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVEPTETIEQVTALGRRFLSLTADLRKIDGIPALLERAVAEFGHIDIL   89 (253)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEecCcchHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            46899999999999999999999999999888754321  1111111001133578888887776664       58999


Q ss_pred             EECCCCCCC---CCCChhhHHHHHHHhhhhHHHHHHHHHcC--CCC-CCcEEEEeeeeeeeeCCCCCccccCCCCCCChh
Q 018503          121 VNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEG-VRPSVLVSATALGYYGTSETEVFDESSPSGNDY  194 (355)
Q Consensus       121 i~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~-~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~~y  194 (355)
                      ||+||....   .+...+.+...+++|+.++..+++++...  ..+ ..++|++||...  +...         +....|
T Consensus        90 i~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~g~iv~isS~~~--~~~~---------~~~~~Y  158 (253)
T PRK08993         90 VNNAGLIRREDAIEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNGGKIINIASMLS--FQGG---------IRVPSY  158 (253)
T ss_pred             EECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEECchhh--ccCC---------CCCcch
Confidence            999997432   23455778889999999999888876441  122 357999999866  4321         123467


Q ss_pred             -HHHHHHHHHHHHhccC---CCCeEEEEEecEEEeCCCCcccchHHHH-HHHhCCCCCCCCcceecccHHHHHHHHHHHH
Q 018503          195 -LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLF-MMFAGGPLGSGQQWFSWIHLDDIVNLIYEAL  269 (355)
Q Consensus       195 -~~k~~~~~~~~~~~~~---~~~~~~i~Rp~~i~G~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~  269 (355)
                       .+|...+.+...+..+   .|+++..++||.+-.+............ .....-+.      ..+...+|+|+.++.++
T Consensus       159 ~~sKaa~~~~~~~la~e~~~~gi~v~~v~pG~v~T~~~~~~~~~~~~~~~~~~~~p~------~r~~~p~eva~~~~~l~  232 (253)
T PRK08993        159 TASKSGVMGVTRLMANEWAKHNINVNAIAPGYMATNNTQQLRADEQRSAEILDRIPA------GRWGLPSDLMGPVVFLA  232 (253)
T ss_pred             HHHHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccCcchhhhccchHHHHHHHhcCCC------CCCcCHHHHHHHHHHHh
Confidence             7777666655544433   5899999999999766422110000000 11111111      12677899999999999


Q ss_pred             hCCC
Q 018503          270 SNPS  273 (355)
Q Consensus       270 ~~~~  273 (355)
                      ....
T Consensus       233 s~~~  236 (253)
T PRK08993        233 SSAS  236 (253)
T ss_pred             Cccc
Confidence            8653

>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=99.62  E-value=3.7e-14  Score=123.08  Aligned_cols=219  Identities=12%  Similarity=0.002  Sum_probs=134.0

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCc-hhhcc----CCC-CCCccCCCeeecCCcchhhhcC------
Q 018503           48 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRS-KAELI----FPG-KKTRFFPGVMIAEEPQWRDCIQ------  115 (355)
Q Consensus        48 ~~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~-~~~~~----~~~-~~~~~~~~~d~~~~~~~~~~~~------  115 (355)
                      +++++|+||||+|.||+++++.|++.|++|+++.|+.. .....    ... ........+|+.|++++.++++      
T Consensus         6 l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   85 (260)
T PRK08416          6 MKGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILEPETYKELFKKIDEDF   85 (260)
T ss_pred             cCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhc
Confidence            34579999999999999999999999999988876432 22111    100 1111134578888887766553      


Q ss_pred             -CCcEEEECCCCCCC---------CCCChhhHHHHHHHhhhhHHHHHHHHHcC--CCCCCcEEEEeeeeeeeeCCCCCcc
Q 018503          116 -GSTAVVNLAGTPIG---------TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEV  183 (355)
Q Consensus       116 -~~d~vi~~a~~~~~---------~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~~~~v~~Ss~~~~~yg~~~~~~  183 (355)
                       ++|++||+||....         .....+.....+++|+.+...+.+.+...  ..+.+++|++||...  +..     
T Consensus        86 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~--~~~-----  158 (260)
T PRK08416         86 DRVDFFISNAIISGRAVVGGYTKFMRLKPKGLNNIYTATVNAFVVGAQEAAKRMEKVGGGSIISLSSTGN--LVY-----  158 (260)
T ss_pred             CCccEEEECccccccccccccCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHhhhccCCEEEEEEecccc--ccC-----
Confidence             57999999985311         12234555677888888766655544321  134568999998654  110     


Q ss_pred             ccCCCCCCChh-HHHHHHHHHHHHhccC---CCCeEEEEEecEEEeCCCCcccchHHHH-HHHhCCCCCCCCcceecccH
Q 018503          184 FDESSPSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLF-MMFAGGPLGSGQQWFSWIHL  258 (355)
Q Consensus       184 ~~e~~~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~i~Rp~~i~G~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~v  258 (355)
                          .+....| .+|...+.+...+..+   .|+++..+.||.+-.+............ ......+.      ..+...
T Consensus       159 ----~~~~~~Y~asK~a~~~~~~~la~el~~~gi~v~~v~PG~i~T~~~~~~~~~~~~~~~~~~~~~~------~r~~~p  228 (260)
T PRK08416        159 ----IENYAGHGTSKAAVETMVKYAATELGEKNIRVNAVSGGPIDTDALKAFTNYEEVKAKTEELSPL------NRMGQP  228 (260)
T ss_pred             ----CCCcccchhhHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccChhhhhccCCHHHHHHHHhcCCC------CCCCCH
Confidence                1223456 7777766666555543   4899999999988655321111111111 11111111      136789


Q ss_pred             HHHHHHHHHHHhCCC---CCCceEecCC
Q 018503          259 DDIVNLIYEALSNPS---YRGVINGTAP  283 (355)
Q Consensus       259 ~Dva~~~~~~~~~~~---~~~~~~i~~~  283 (355)
                      +|+|.+++.++....   .+..+.+.++
T Consensus       229 ~~va~~~~~l~~~~~~~~~G~~i~vdgg  256 (260)
T PRK08416        229 EDLAGACLFLCSEKASWLTGQTIVVDGG  256 (260)
T ss_pred             HHHHHHHHHHcChhhhcccCcEEEEcCC
Confidence            999999999987543   3335555544

>PRK06197 short chain dehydrogenase; Provisional

Probab=99.62  E-value=5.4e-14  Score=125.00  Aligned_cols=177  Identities=13%  Similarity=0.010  Sum_probs=113.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhcc----CCC--CCCccCCCeeecCCcchhhhcC-------
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELI----FPG--KKTRFFPGVMIAEEPQWRDCIQ-------  115 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~----~~~--~~~~~~~~~d~~~~~~~~~~~~-------  115 (355)
                      .+++|+||||+|+||++++++|+++|++|++++|+.++....    ...  ........+|+.|.+++.++++       
T Consensus        15 ~~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~   94 (306)
T PRK06197         15 SGRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAADALRAAYP   94 (306)
T ss_pred             CCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHhhCC
Confidence            347999999999999999999999999999999986553221    100  0001133578888887766553       


Q ss_pred             CCcEEEECCCCCCC-CCCChhhHHHHHHHhhhh----HHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCCCCccccC--CC
Q 018503          116 GSTAVVNLAGTPIG-TRWSSEIKKEIKESRIRV----TSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDE--SS  188 (355)
Q Consensus       116 ~~d~vi~~a~~~~~-~~~~~~~~~~~~~~n~~~----~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e--~~  188 (355)
                      ++|++||+||.... .....+..+..+++|+.+    +..+++.+++  .+.+++|++||.....|+...-.....  ..
T Consensus        95 ~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~--~~~~~iV~vSS~~~~~~~~~~~~~~~~~~~~  172 (306)
T PRK06197         95 RIDLLINNAGVMYTPKQTTADGFELQFGTNHLGHFALTGLLLDRLLP--VPGSRVVTVSSGGHRIRAAIHFDDLQWERRY  172 (306)
T ss_pred             CCCEEEECCccccCCCccCCCCcchhhhhhhHHHHHHHHHHHHHHhh--CCCCEEEEECCHHHhccCCCCccccCcccCC
Confidence            58999999996432 122334556778899999    5556666655  456799999997652123211111111  11


Q ss_pred             CCCChh-HHHHHHHHHHHHhccC---CCCeEE--EEEecEEEeCC
Q 018503          189 PSGNDY-LAEVCREWEGTALKVN---KDVRLA--LIRIGIVLGKD  227 (355)
Q Consensus       189 ~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~--i~Rp~~i~G~~  227 (355)
                      ++...| .+|...+.+...+..+   .+++++  .+.||.+..+.
T Consensus       173 ~~~~~Y~~SK~a~~~~~~~la~~l~~~~i~v~~v~~~PG~v~T~~  217 (306)
T PRK06197        173 NRVAAYGQSKLANLLFTYELQRRLAAAGATTIAVAAHPGVSNTEL  217 (306)
T ss_pred             CcHHHHHHHHHHHHHHHHHHHHHhhcCCCCeEEEEeCCCcccCcc
Confidence            223467 7787766666554432   355544  45799887654

>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.62  E-value=1.4e-14  Score=123.96  Aligned_cols=202  Identities=16%  Similarity=0.092  Sum_probs=129.4

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCC---CCCccCCCeeecCCcchhhhcC-------CCcE
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG---KKTRFFPGVMIAEEPQWRDCIQ-------GSTA  119 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~---~~~~~~~~~d~~~~~~~~~~~~-------~~d~  119 (355)
                      .++|+||||+|+||.++++.|++.|++|++++|++.........   ........+|+.+++++.++++       ++|.
T Consensus         5 ~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   84 (238)
T PRK05786          5 GKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLSKYGNIHYVVGDVSSTESARNVIEKAAKVLNAIDG   84 (238)
T ss_pred             CcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEECCCCCHHHHHHHHHHHHHHhCCCCE
Confidence            36899999999999999999999999999999987654322110   0000134578888887766553       4699


Q ss_pred             EEECCCCCCC-CCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCChh-HHH
Q 018503          120 VVNLAGTPIG-TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-LAE  197 (355)
Q Consensus       120 vi~~a~~~~~-~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~~y-~~k  197 (355)
                      +||+++.... .....+.....++.|+.+...+++.+........++|++||.... ++.         .+....| .+|
T Consensus        85 ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~-~~~---------~~~~~~Y~~sK  154 (238)
T PRK05786         85 LVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKEGSSIVLVSSMSGI-YKA---------SPDQLSYAVAK  154 (238)
T ss_pred             EEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhcCCEEEEEecchhc-ccC---------CCCchHHHHHH
Confidence            9999985321 112224456677899998887777765521123578888886431 211         1223457 667


Q ss_pred             HHHHHHHHHhcc---CCCCeEEEEEecEEEeCCCCcccchHHHHHHHhCCCCCCCCcceecccHHHHHHHHHHHHhCCC
Q 018503          198 VCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPS  273 (355)
Q Consensus       198 ~~~~~~~~~~~~---~~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~  273 (355)
                      ...+.+.+.+..   ..+++++++||++++++.....     .+...  ...     ...++..+|++++++.++..+.
T Consensus       155 ~~~~~~~~~~~~~~~~~gi~v~~i~pg~v~~~~~~~~-----~~~~~--~~~-----~~~~~~~~~va~~~~~~~~~~~  221 (238)
T PRK05786        155 AGLAKAVEILASELLGRGIRVNGIAPTTISGDFEPER-----NWKKL--RKL-----GDDMAPPEDFAKVIIWLLTDEA  221 (238)
T ss_pred             HHHHHHHHHHHHHHhhcCeEEEEEecCccCCCCCchh-----hhhhh--ccc-----cCCCCCHHHHHHHHHHHhcccc
Confidence            655544444333   2489999999999998742110     00000  000     1135788999999999997643

>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase

Probab=99.62  E-value=3.6e-14  Score=121.76  Aligned_cols=213  Identities=17%  Similarity=0.098  Sum_probs=133.2

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhCCCeEEEEecC-CchhhccC----CCCCCccCCCeeecCCcchhhhc-------CCCc
Q 018503           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRS-RSKAELIF----PGKKTRFFPGVMIAEEPQWRDCI-------QGST  118 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~-~~~~~~~~----~~~~~~~~~~~d~~~~~~~~~~~-------~~~d  118 (355)
                      +++|||||+|+||++++++|+++|++|+++.|. ........    ..........+|+.|++++.+++       ..+|
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   80 (242)
T TIGR01829         1 RIALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQEQGALGFDFRVVEGDVSSFESCKAAVAKVEAELGPID   80 (242)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHcCCCc
Confidence            479999999999999999999999999999883 32221110    00000113456888887776554       3589


Q ss_pred             EEEECCCCCCC---CCCChhhHHHHHHHhhhhHHHHHHH----HHcCCCCCCcEEEEeeeeeeeeCCCCCccccCCCCCC
Q 018503          119 AVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDL----INESPEGVRPSVLVSATALGYYGTSETEVFDESSPSG  191 (355)
Q Consensus       119 ~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a----~~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~  191 (355)
                      +|||++|....   .....+.+...++.|+.++..++++    +++  .+.+++|++||.... .+.          +..
T Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~~~~~iv~iss~~~~-~~~----------~~~  147 (242)
T TIGR01829        81 VLVNNAGITRDATFKKMTYEQWSAVIDTNLNSVFNVTQPVIDGMRE--RGWGRIINISSVNGQ-KGQ----------FGQ  147 (242)
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh--cCCcEEEEEcchhhc-CCC----------CCc
Confidence            99999986432   2234456677888999987775544    444  466789999986541 111          123


Q ss_pred             Chh-HHHHHHHHHHHHhcc---CCCCeEEEEEecEEEeCCCCcc-cchHHHHHHHhCCCCCCCCcceecccHHHHHHHHH
Q 018503          192 NDY-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGAL-AKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIY  266 (355)
Q Consensus       192 ~~y-~~k~~~~~~~~~~~~---~~~~~~~i~Rp~~i~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~  266 (355)
                      ..| .+|...+.....+..   ..+++++.++|+.+.++..... .....  ......+.      ..+...+|+++++.
T Consensus       148 ~~y~~sk~a~~~~~~~la~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~--~~~~~~~~------~~~~~~~~~a~~~~  219 (242)
T TIGR01829       148 TNYSAAKAGMIGFTKALAQEGATKGVTVNTISPGYIATDMVMAMREDVLN--SIVAQIPV------GRLGRPEEIAAAVA  219 (242)
T ss_pred             chhHHHHHHHHHHHHHHHHHhhhhCeEEEEEeeCCCcCccccccchHHHH--HHHhcCCC------CCCcCHHHHHHHHH
Confidence            456 666544444333322   3489999999999987753221 11111  11112222      12456789999998


Q ss_pred             HHHhCCC---CCCceEecCCC
Q 018503          267 EALSNPS---YRGVINGTAPN  284 (355)
Q Consensus       267 ~~~~~~~---~~~~~~i~~~~  284 (355)
                      .++..+.   .+..+.+.++.
T Consensus       220 ~l~~~~~~~~~G~~~~~~gg~  240 (242)
T TIGR01829       220 FLASEEAGYITGATLSINGGL  240 (242)
T ss_pred             HHcCchhcCccCCEEEecCCc
Confidence            8887643   34467776653

(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.

>PRK08278 short chain dehydrogenase; Provisional

Probab=99.61  E-value=3.1e-14  Score=124.42  Aligned_cols=202  Identities=13%  Similarity=0.070  Sum_probs=131.8

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhcc-----------CCCCCCccCCCeeecCCcchhhhcC---
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELI-----------FPGKKTRFFPGVMIAEEPQWRDCIQ---  115 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-----------~~~~~~~~~~~~d~~~~~~~~~~~~---  115 (355)
                      +++++||||+|+||++++++|+++|++|++++|+.+....+           ...........+|+.+++++.++++   
T Consensus         6 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~   85 (273)
T PRK08278          6 GKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDVRDEDQVAAAVAKAV   85 (273)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEecccccccchhhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHH
Confidence            46899999999999999999999999999999976532111           0000001133478888887776654   


Q ss_pred             ----CCcEEEECCCCCCC---CCCChhhHHHHHHHhhhhHHHHHHHHHcC--CCCCCcEEEEeeeeeeeeCCCCCccccC
Q 018503          116 ----GSTAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDE  186 (355)
Q Consensus       116 ----~~d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~~~~v~~Ss~~~~~yg~~~~~~~~e  186 (355)
                          ++|++||+||....   .....+.....+++|+.++.++++++...  ..+..+++++||...  ..   .    .
T Consensus        86 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~--~~---~----~  156 (273)
T PRK08278         86 ERFGGIDICVNNASAINLTGTEDTPMKRFDLMQQINVRGTFLVSQACLPHLKKSENPHILTLSPPLN--LD---P----K  156 (273)
T ss_pred             HHhCCCCEEEECCCCcCCCCcccCCHHHHHHHHHHhchHHHHHHHHHHHHHHhcCCCEEEEECCchh--cc---c----c
Confidence                68999999997432   22344566788899999999999988642  123457888887532  11   0    0


Q ss_pred             CCCCCChh-HHHHHHHHHHHHhccC---CCCeEEEEEecEEEeCCCCcccchHHHHHHHhCCCCCCCCcceecccHHHHH
Q 018503          187 SSPSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIV  262 (355)
Q Consensus       187 ~~~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva  262 (355)
                      ..+....| .+|...+.+...+..+   .+++++.+.|+.+....      .....  ..+     ......+...+|+|
T Consensus       157 ~~~~~~~Y~~sK~a~~~~~~~la~el~~~~I~v~~i~Pg~~i~t~------~~~~~--~~~-----~~~~~~~~~p~~va  223 (273)
T PRK08278        157 WFAPHTAYTMAKYGMSLCTLGLAEEFRDDGIAVNALWPRTTIATA------AVRNL--LGG-----DEAMRRSRTPEIMA  223 (273)
T ss_pred             ccCCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeCCCccccH------HHHhc--ccc-----cccccccCCHHHHH
Confidence            01334567 7787777766655443   47999999998432211      00000  001     01112367889999


Q ss_pred             HHHHHHHhCCC
Q 018503          263 NLIYEALSNPS  273 (355)
Q Consensus       263 ~~~~~~~~~~~  273 (355)
                      ++++.++....
T Consensus       224 ~~~~~l~~~~~  234 (273)
T PRK08278        224 DAAYEILSRPA  234 (273)
T ss_pred             HHHHHHhcCcc
Confidence            99999998654

>PRK07832 short chain dehydrogenase; Provisional

Probab=99.61  E-value=3.9e-14  Score=123.80  Aligned_cols=205  Identities=15%  Similarity=0.089  Sum_probs=130.3

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccC----CCCCC-ccCCCeeecCCcchhhhc-------CCCc
Q 018503           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIF----PGKKT-RFFPGVMIAEEPQWRDCI-------QGST  118 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~~~~~-~~~~~~d~~~~~~~~~~~-------~~~d  118 (355)
                      |+++||||+|.||.++++.|+++|++|++++|+.+......    ..... .....+|+.|++++.+++       .++|
T Consensus         1 k~vlItGas~giG~~la~~la~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   80 (272)
T PRK07832          1 KRCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARALGGTVPEHRALDISDYDAVAAFAADIHAAHGSMD   80 (272)
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCCHHHHHHHHHHHHHhcCCCC
Confidence            47999999999999999999999999999999875432221    11100 012357888887766544       3579


Q ss_pred             EEEECCCCCCC---CCCChhhHHHHHHHhhhhHHHHHHHHHcC---CCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCC
Q 018503          119 AVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES---PEGVRPSVLVSATALGYYGTSETEVFDESSPSGN  192 (355)
Q Consensus       119 ~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~~~~---~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~  192 (355)
                      +|||++|....   ...+.+.....+++|+.++..+++++...   ....+++|++||...  +..         .+...
T Consensus        81 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~--~~~---------~~~~~  149 (272)
T PRK07832         81 VVMNIAGISAWGTVDRLTHEQWRRMVDVNLMGPIHVIETFVPPMVAAGRGGHLVNVSSAAG--LVA---------LPWHA  149 (272)
T ss_pred             EEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccccc--cCC---------CCCCc
Confidence            99999986422   23355666788999999999999886421   023468999998754  211         12233


Q ss_pred             hh-HHHHHHHHHHHHhc---cCCCCeEEEEEecEEEeCCCCccc-----chHHHHHHHhCCCCCCCCcceecccHHHHHH
Q 018503          193 DY-LAEVCREWEGTALK---VNKDVRLALIRIGIVLGKDGGALA-----KMIPLFMMFAGGPLGSGQQWFSWIHLDDIVN  263 (355)
Q Consensus       193 ~y-~~k~~~~~~~~~~~---~~~~~~~~i~Rp~~i~G~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~  263 (355)
                      .| .+|...+.+.+...   ...++++++++||.+.++......     ...+.......      ......+..+|+|+
T Consensus       150 ~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~vA~  223 (272)
T PRK07832        150 AYSASKFGLRGLSEVLRFDLARHGIGVSVVVPGAVKTPLVNTVEIAGVDREDPRVQKWVD------RFRGHAVTPEKAAE  223 (272)
T ss_pred             chHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCcchhcccccccCcchhhHHHHHH------hcccCCCCHHHHHH
Confidence            46 56654443333222   235899999999999877432110     00000000000      00123589999999


Q ss_pred             HHHHHHhCC
Q 018503          264 LIYEALSNP  272 (355)
Q Consensus       264 ~~~~~~~~~  272 (355)
                      +++.++..+
T Consensus       224 ~~~~~~~~~  232 (272)
T PRK07832        224 KILAGVEKN  232 (272)
T ss_pred             HHHHHHhcC
Confidence            999999643

>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

Probab=99.61  E-value=1.5e-14  Score=140.80  Aligned_cols=225  Identities=17%  Similarity=0.115  Sum_probs=141.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCC-----C-CCccCCCeeecCCcchhhhcC-------
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-----K-KTRFFPGVMIAEEPQWRDCIQ-------  115 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-----~-~~~~~~~~d~~~~~~~~~~~~-------  115 (355)
                      .+++||||||+|+||++++++|+++|++|++++|+.+........     . .......+|+.|.+++.++++       
T Consensus       413 ~gkvvLVTGasggIG~aiA~~La~~Ga~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i~~~~g  492 (676)
T TIGR02632       413 ARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFADVALAYG  492 (676)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHHHHHhcC
Confidence            457999999999999999999999999999999987654322110     0 001133578989888877664       


Q ss_pred             CCcEEEECCCCCCC---CCCChhhHHHHHHHhhhhHHHHHHHHHc-C-CCC-CCcEEEEeeeeeeeeCCCCCccccCCCC
Q 018503          116 GSTAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINE-S-PEG-VRPSVLVSATALGYYGTSETEVFDESSP  189 (355)
Q Consensus       116 ~~d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~~~-~-~~~-~~~~v~~Ss~~~~~yg~~~~~~~~e~~~  189 (355)
                      ++|+|||+||....   .....+.+...+++|+.+...+...+.. + ..+ ..++|++||.... ++.          +
T Consensus       493 ~iDilV~nAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~al~~m~~~~~~g~IV~iSS~~a~-~~~----------~  561 (676)
T TIGR02632       493 GVDIVVNNAGIATSSPFEETTLQEWQLNLDILATGYFLVAREAFRQMREQGLGGNIVFIASKNAV-YAG----------K  561 (676)
T ss_pred             CCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEeChhhc-CCC----------C
Confidence            68999999997432   1223455677888998887766544322 1 022 3579999986542 321          1


Q ss_pred             CCChh-HHHHHHHHHHHHhccC---CCCeEEEEEecEEE-eCCCCcccchHHHHHHHhC-------CCCCCCCcceeccc
Q 018503          190 SGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVL-GKDGGALAKMIPLFMMFAG-------GPLGSGQQWFSWIH  257 (355)
Q Consensus       190 ~~~~y-~~k~~~~~~~~~~~~~---~~~~~~i~Rp~~i~-G~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~i~  257 (355)
                      ....| .+|...+.+...+..+   .|+++..++|+.++ |.+.... .+........+       ..+........+++
T Consensus       562 ~~~aY~aSKaA~~~l~r~lA~el~~~gIrVn~V~Pg~V~~~s~~~~~-~~~~~~~~~~~~~~~~~~~~~~~r~~l~r~v~  640 (676)
T TIGR02632       562 NASAYSAAKAAEAHLARCLAAEGGTYGIRVNTVNPDAVLQGSGIWDG-EWREERAAAYGIPADELEEHYAKRTLLKRHIF  640 (676)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEECCceecCcccccc-cchhhhhhcccCChHHHHHHHHhcCCcCCCcC
Confidence            23567 7787776666554443   48999999999887 3221000 00000000000       00011122234689


Q ss_pred             HHHHHHHHHHHHhCCC---CCCceEecCCCc
Q 018503          258 LDDIVNLIYEALSNPS---YRGVINGTAPNP  285 (355)
Q Consensus       258 v~Dva~~~~~~~~~~~---~~~~~~i~~~~~  285 (355)
                      .+|+|+++..++....   .+.++++.+|..
T Consensus       641 peDVA~av~~L~s~~~~~~TG~~i~vDGG~~  671 (676)
T TIGR02632       641 PADIAEAVFFLASSKSEKTTGCIITVDGGVP  671 (676)
T ss_pred             HHHHHHHHHHHhCCcccCCcCcEEEECCCch
Confidence            9999999999987533   345788877754

>PRK05872 short chain dehydrogenase; Provisional

Probab=99.61  E-value=3.2e-14  Score=125.80  Aligned_cols=210  Identities=15%  Similarity=0.142  Sum_probs=137.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCC---CCCccCCCeeecCCcchhhhc-------CCCc
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG---KKTRFFPGVMIAEEPQWRDCI-------QGST  118 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~---~~~~~~~~~d~~~~~~~~~~~-------~~~d  118 (355)
                      .+++|+||||+|.||.++++.|.++|++|++++|+.+........   ........+|+.|.+++.+++       ..+|
T Consensus         8 ~gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id   87 (296)
T PRK05872          8 AGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGGDDRVLTVVADVTDLAAMQAAAEEAVERFGGID   87 (296)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence            347899999999999999999999999999999987654432111   000012237888888776654       3689


Q ss_pred             EEEECCCCCCC---CCCChhhHHHHHHHhhhhHHHHHHHHHcC-CCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCChh
Q 018503          119 AVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES-PEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY  194 (355)
Q Consensus       119 ~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~~y  194 (355)
                      +|||+||....   ...+.+..+..+++|+.++..+++++... .....++|++||...  +...         +....|
T Consensus        88 ~vI~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~g~iv~isS~~~--~~~~---------~~~~~Y  156 (296)
T PRK05872         88 VVVANAGIASGGSVAQVDPDAFRRVIDVNLLGVFHTVRATLPALIERRGYVLQVSSLAA--FAAA---------PGMAAY  156 (296)
T ss_pred             EEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEEeCHhh--cCCC---------CCchHH
Confidence            99999997432   23345666788999999999998877531 112358999999765  3321         223467


Q ss_pred             -HHHHHHHHHHHHhcc---CCCCeEEEEEecEEEeCCCCcccchHHHHH-HHhCCCCCCCCcceecccHHHHHHHHHHHH
Q 018503          195 -LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALAKMIPLFM-MFAGGPLGSGQQWFSWIHLDDIVNLIYEAL  269 (355)
Q Consensus       195 -~~k~~~~~~~~~~~~---~~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~  269 (355)
                       .+|...+.+...+..   ..|+.++.+.|+.+..+............. .....+.    ....+...+|+|++++.++
T Consensus       157 ~asKaal~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~~~~~~~~~~~~~~~~~----p~~~~~~~~~va~~i~~~~  232 (296)
T PRK05872        157 CASKAGVEAFANALRLEVAHHGVTVGSAYLSWIDTDLVRDADADLPAFRELRARLPW----PLRRTTSVEKCAAAFVDGI  232 (296)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHCcEEEEEecCcccchhhhhccccchhHHHHHhhCCC----cccCCCCHHHHHHHHHHHH
Confidence             777666655554433   248999999999987653221111101111 1111110    1123678999999999999


Q ss_pred             hCCC
Q 018503          270 SNPS  273 (355)
Q Consensus       270 ~~~~  273 (355)
                      ....
T Consensus       233 ~~~~  236 (296)
T PRK05872        233 ERRA  236 (296)
T ss_pred             hcCC
Confidence            8653

>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.61  E-value=5.6e-14  Score=122.55  Aligned_cols=221  Identities=12%  Similarity=0.053  Sum_probs=139.4

Q ss_pred             cCCCCEEEEEcCC--chHHHHHHHHHHhCCCeEEEEecCCc---hhhccCCCCCCccCCCeeecCCcchhhhcC------
Q 018503           47 KASQMTVSVTGAT--GFIGRRLVQRLQADNHQVRVLTRSRS---KAELIFPGKKTRFFPGVMIAEEPQWRDCIQ------  115 (355)
Q Consensus        47 ~~~~~~IlVtGat--G~iG~~l~~~L~~~g~~V~~~~r~~~---~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~------  115 (355)
                      .+..++++||||+  +.||.++++.|++.|++|++..|+..   ....+...........+|+.|++++.++++      
T Consensus         7 ~~~~k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   86 (272)
T PRK08159          7 LMAGKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGDALKKRVEPLAAELGAFVAGHCDVTDEASIDAVFETLEKKW   86 (272)
T ss_pred             cccCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHHHhcCCceEEecCCCCHHHHHHHHHHHHHhc
Confidence            3445789999997  89999999999999999998887632   111111111111134579998887776553      


Q ss_pred             -CCcEEEECCCCCCC-------CCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCCCCccccCC
Q 018503          116 -GSTAVVNLAGTPIG-------TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDES  187 (355)
Q Consensus       116 -~~d~vi~~a~~~~~-------~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~  187 (355)
                       .+|++||+||....       .+.+.+.+...+++|+.++..+++++...-....++|++||.+.  ..         .
T Consensus        87 g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~Iv~iss~~~--~~---------~  155 (272)
T PRK08159         87 GKLDFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMTDGGSILTLTYYGA--EK---------V  155 (272)
T ss_pred             CCCcEEEECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcCCCceEEEEecccc--cc---------C
Confidence             57999999997421       13345677889999999999998877653123368999988543  11         1


Q ss_pred             CCCCChh-HHHHHHHHHHHHhcc---CCCCeEEEEEecEEEeCCCCcccchHHHHHHHh-CCCCCCCCcceecccHHHHH
Q 018503          188 SPSGNDY-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALAKMIPLFMMFA-GGPLGSGQQWFSWIHLDDIV  262 (355)
Q Consensus       188 ~~~~~~y-~~k~~~~~~~~~~~~---~~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~v~Dva  262 (355)
                      .+....| .+|.....+.+.+..   ..++++..+.||.+..+................ ..+.      ..+...+|+|
T Consensus       156 ~p~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~------~r~~~peevA  229 (272)
T PRK08159        156 MPHYNVMGVAKAALEASVKYLAVDLGPKNIRVNAISAGPIKTLAASGIGDFRYILKWNEYNAPL------RRTVTIEEVG  229 (272)
T ss_pred             CCcchhhhhHHHHHHHHHHHHHHHhcccCeEEEEeecCCcCCHHHhcCCcchHHHHHHHhCCcc------cccCCHHHHH
Confidence            1223456 777666555544433   348999999999886542111111100011111 1111      1257889999


Q ss_pred             HHHHHHHhCCC--CCC-ceEecCCC
Q 018503          263 NLIYEALSNPS--YRG-VINGTAPN  284 (355)
Q Consensus       263 ~~~~~~~~~~~--~~~-~~~i~~~~  284 (355)
                      ++++.++....  ..| .+.+.+|.
T Consensus       230 ~~~~~L~s~~~~~itG~~i~vdgG~  254 (272)
T PRK08159        230 DSALYLLSDLSRGVTGEVHHVDSGY  254 (272)
T ss_pred             HHHHHHhCccccCccceEEEECCCc
Confidence            99999998543  334 56666654

>PRK06953 short chain dehydrogenase; Provisional

Probab=99.61  E-value=9.3e-14  Score=117.61  Aligned_cols=191  Identities=15%  Similarity=0.108  Sum_probs=132.5

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhc---C--CCcEEEECCC
Q 018503           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCI---Q--GSTAVVNLAG  125 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~---~--~~d~vi~~a~  125 (355)
                      ++++||||+|+||++++++|++.|++|++++|+.+....+.....  ....+|+.+.+.+.+++   .  ++|+|||+++
T Consensus         2 ~~vlvtG~sg~iG~~la~~L~~~G~~v~~~~r~~~~~~~~~~~~~--~~~~~D~~~~~~v~~~~~~~~~~~~d~vi~~ag   79 (222)
T PRK06953          2 KTVLIVGASRGIGREFVRQYRADGWRVIATARDAAALAALQALGA--EALALDVADPASVAGLAWKLDGEALDAAVYVAG   79 (222)
T ss_pred             ceEEEEcCCCchhHHHHHHHHhCCCEEEEEECCHHHHHHHHhccc--eEEEecCCCHHHHHHHHHHhcCCCCCEEEECCC
Confidence            589999999999999999999999999999998765443322111  13467888888877753   2  4899999999


Q ss_pred             CCCC-----CCCChhhHHHHHHHhhhhHHHHHHHHHcC-CCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCChh-HHHH
Q 018503          126 TPIG-----TRWSSEIKKEIKESRIRVTSKVVDLINES-PEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-LAEV  198 (355)
Q Consensus       126 ~~~~-----~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~~y-~~k~  198 (355)
                      ....     .....+++...++.|+.++..+++++... .....+++++||.... ++...       ......| .+|.
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~-~~~~~-------~~~~~~Y~~sK~  151 (222)
T PRK06953         80 VYGPRTEGVEPITREDFDAVMHTNVLGPMQLLPILLPLVEAAGGVLAVLSSRMGS-IGDAT-------GTTGWLYRASKA  151 (222)
T ss_pred             cccCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHhhhccCCeEEEEcCcccc-ccccc-------CCCccccHHhHH
Confidence            7521     12256677889999999999999888642 1233568888886532 44211       1111247 7777


Q ss_pred             HHHHHHHHhccCC-CCeEEEEEecEEEeCCCCcccchHHHHHHHhCCCCCCCCcceecccHHHHHHHHHHHHhCCC
Q 018503          199 CREWEGTALKVNK-DVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPS  273 (355)
Q Consensus       199 ~~~~~~~~~~~~~-~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~  273 (355)
                      ..+.....+..+. +++++.++|+.+..+....                      ...+..++.+..+..++....
T Consensus       152 a~~~~~~~~~~~~~~i~v~~v~Pg~i~t~~~~~----------------------~~~~~~~~~~~~~~~~~~~~~  205 (222)
T PRK06953        152 ALNDALRAASLQARHATCIALHPGWVRTDMGGA----------------------QAALDPAQSVAGMRRVIAQAT  205 (222)
T ss_pred             HHHHHHHHHhhhccCcEEEEECCCeeecCCCCC----------------------CCCCCHHHHHHHHHHHHHhcC
Confidence            7666666554433 7899999999987763110                      013577888888888876544

>PRK07831 short chain dehydrogenase; Provisional

Probab=99.61  E-value=4.7e-14  Score=122.56  Aligned_cols=205  Identities=15%  Similarity=0.023  Sum_probs=133.8

Q ss_pred             CCEEEEEcCCc-hHHHHHHHHHHhCCCeEEEEecCCchhhccCCC-----C-CCccCCCeeecCCcchhhhcC-------
Q 018503           50 QMTVSVTGATG-FIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-----K-KTRFFPGVMIAEEPQWRDCIQ-------  115 (355)
Q Consensus        50 ~~~IlVtGatG-~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-----~-~~~~~~~~d~~~~~~~~~~~~-------  115 (355)
                      .++++||||+| .||+++++.|+++|++|++++|+..+.......     . .......+|+.+++++.++++       
T Consensus        17 ~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g   96 (262)
T PRK07831         17 GKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALIDAAVERLG   96 (262)
T ss_pred             CCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            47899999998 699999999999999999999877543322110     0 001133468888877766553       


Q ss_pred             CCcEEEECCCCCCC---CCCChhhHHHHHHHhhhhHHHHHHHHHcC--CCC-CCcEEEEeeeeeeeeCCCCCccccCCCC
Q 018503          116 GSTAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEG-VRPSVLVSATALGYYGTSETEVFDESSP  189 (355)
Q Consensus       116 ~~d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~-~~~~v~~Ss~~~~~yg~~~~~~~~e~~~  189 (355)
                      .+|++||+||....   ...+.+.....+++|+.++..+++++...  ..+ ..+++++||...  +-.         .+
T Consensus        97 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~ss~~~--~~~---------~~  165 (262)
T PRK07831         97 RLDVLVNNAGLGGQTPVVDMTDDEWSRVLDVTLTGTFRATRAALRYMRARGHGGVIVNNASVLG--WRA---------QH  165 (262)
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhh--cCC---------CC
Confidence            57999999996422   22344667788899999998888776431  122 457888877543  211         12


Q ss_pred             CCChh-HHHHHHHHHHHHhccC---CCCeEEEEEecEEEeCCCCcc--cchHHHHHHHhCCCCCCCCcceecccHHHHHH
Q 018503          190 SGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGAL--AKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVN  263 (355)
Q Consensus       190 ~~~~y-~~k~~~~~~~~~~~~~---~~~~~~i~Rp~~i~G~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~  263 (355)
                      ....| .+|...+.+.+.+..+   .|+++..++|+.+..+.....  .....  ......++      ..+...+|+|+
T Consensus       166 ~~~~Y~~sKaal~~~~~~la~e~~~~gI~v~~i~Pg~~~t~~~~~~~~~~~~~--~~~~~~~~------~r~~~p~~va~  237 (262)
T PRK07831        166 GQAHYAAAKAGVMALTRCSALEAAEYGVRINAVAPSIAMHPFLAKVTSAELLD--ELAAREAF------GRAAEPWEVAN  237 (262)
T ss_pred             CCcchHHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccCcccccccCHHHHH--HHHhcCCC------CCCcCHHHHHH
Confidence            33457 7787777666655543   589999999999987743211  11111  11111221      23677899999


Q ss_pred             HHHHHHhCCC
Q 018503          264 LIYEALSNPS  273 (355)
Q Consensus       264 ~~~~~~~~~~  273 (355)
                      +++.++....
T Consensus       238 ~~~~l~s~~~  247 (262)
T PRK07831        238 VIAFLASDYS  247 (262)
T ss_pred             HHHHHcCchh
Confidence            9999988643

>PRK07023 short chain dehydrogenase; Provisional

Probab=99.60  E-value=8.6e-15  Score=125.76  Aligned_cols=164  Identities=14%  Similarity=0.125  Sum_probs=113.5

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcC-----------CCcE
Q 018503           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ-----------GSTA  119 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-----------~~d~  119 (355)
                      |+|+||||+|+||++++++|+++|++|++++|+..+..... .........+|+.+.+++.+++.           .+|+
T Consensus         2 ~~vlItGasggiG~~ia~~l~~~G~~v~~~~r~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (243)
T PRK07023          2 VRAIVTGHSRGLGAALAEQLLQPGIAVLGVARSRHPSLAAA-AGERLAEVELDLSDAAAAAAWLAGDLLAAFVDGASRVL   80 (243)
T ss_pred             ceEEEecCCcchHHHHHHHHHhCCCEEEEEecCcchhhhhc-cCCeEEEEEeccCCHHHHHHHHHHHHHHHhccCCCceE
Confidence            68999999999999999999999999999999865422111 11011134578888887776331           4789


Q ss_pred             EEECCCCCCC----CCCChhhHHHHHHHhhhhHHHHHHHHHcC--CCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCCh
Q 018503          120 VVNLAGTPIG----TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGND  193 (355)
Q Consensus       120 vi~~a~~~~~----~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~~  193 (355)
                      +||+++....    .....+.....+++|+.++..+.+.+...  ..+.+++|++||...  +..         .+....
T Consensus        81 ~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~--~~~---------~~~~~~  149 (243)
T PRK07023         81 LINNAGTVEPIGPLATLDAAAIARAVGLNVAAPLMLTAALAQAASDAAERRILHISSGAA--RNA---------YAGWSV  149 (243)
T ss_pred             EEEcCcccCCCCccccCCHHHHHHHeeeeehHHHHHHHHHHHHhhccCCCEEEEEeChhh--cCC---------CCCchH
Confidence            9999987432    12245666788899999977666655431  135578999999765  321         122346


Q ss_pred             h-HHHHHHHHHHHHhcc--CCCCeEEEEEecEEEeC
Q 018503          194 Y-LAEVCREWEGTALKV--NKDVRLALIRIGIVLGK  226 (355)
Q Consensus       194 y-~~k~~~~~~~~~~~~--~~~~~~~i~Rp~~i~G~  226 (355)
                      | .+|...+.+...+..  ..++++..++|+.+-.+
T Consensus       150 Y~~sK~a~~~~~~~~~~~~~~~i~v~~v~pg~~~t~  185 (243)
T PRK07023        150 YCATKAALDHHARAVALDANRALRIVSLAPGVVDTG  185 (243)
T ss_pred             HHHHHHHHHHHHHHHHhcCCCCcEEEEecCCccccH
Confidence            7 777777776665543  35899999999987554

>TIGR02415 23BDH acetoin reductases

Probab=99.60  E-value=1.3e-14  Score=125.51  Aligned_cols=218  Identities=17%  Similarity=0.087  Sum_probs=134.9

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccC----CCCCCccCCCeeecCCcchhhhcC-------CCcE
Q 018503           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIF----PGKKTRFFPGVMIAEEPQWRDCIQ-------GSTA  119 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~~~~~~~~~~~d~~~~~~~~~~~~-------~~d~  119 (355)
                      ++++||||+|+||.+++++|++.|++|+++.|+........    ..........+|+.|++++.+++.       .+|+
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~   80 (254)
T TIGR02415         1 KVALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQAGGKAVAYKLDVSDKDQVFSAIDQAAEKFGGFDV   80 (254)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            36999999999999999999999999999999865432221    111001133478888887766553       5799


Q ss_pred             EEECCCCCCC---CCCChhhHHHHHHHhhhhHHHHHHHHHcC--CC-CCCcEEEEeeeeeeeeCCCCCccccCCCCCCCh
Q 018503          120 VVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PE-GVRPSVLVSATALGYYGTSETEVFDESSPSGND  193 (355)
Q Consensus       120 vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~-~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~~  193 (355)
                      |||+++....   .....+..+..+++|+.++..+++++...  .. ..+++|++||.... ++.          +....
T Consensus        81 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~-~~~----------~~~~~  149 (254)
T TIGR02415        81 MVNNAGVAPITPILEITEEELKKVYNVNVKGVLFGIQAAARQFKKQGHGGKIINAASIAGH-EGN----------PILSA  149 (254)
T ss_pred             EEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEecchhhc-CCC----------CCCcc
Confidence            9999987422   13345666788999999988777665431  02 23689999886542 331          22445


Q ss_pred             h-HHHHHHHHHHHHhccC---CCCeEEEEEecEEEeCCCCcccchHHHHHHHhCCCCC-------CCCcceecccHHHHH
Q 018503          194 Y-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLG-------SGQQWFSWIHLDDIV  262 (355)
Q Consensus       194 y-~~k~~~~~~~~~~~~~---~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~i~v~Dva  262 (355)
                      | .+|...+.+...+..+   .++.+.+++|+.+..+....   .........+.+++       .......+...+|++
T Consensus       150 Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~Pg~i~t~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a  226 (254)
T TIGR02415       150 YSSTKFAVRGLTQTAAQELAPKGITVNAYCPGIVKTPMWEE---IDEETSEIAGKPIGEGFEEFSSEIALGRPSEPEDVA  226 (254)
T ss_pred             hHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccChhhhh---hhhhhhhcccCchHHHHHHHHhhCCCCCCCCHHHHH
Confidence            7 6776666555443332   47999999999886553111   00000000000000       000112368889999


Q ss_pred             HHHHHHHhCCC--CCCceEecC
Q 018503          263 NLIYEALSNPS--YRGVINGTA  282 (355)
Q Consensus       263 ~~~~~~~~~~~--~~~~~~i~~  282 (355)
                      +++..++....  ..|.+...+
T Consensus       227 ~~~~~l~~~~~~~~~g~~~~~d  248 (254)
T TIGR02415       227 GLVSFLASEDSDYITGQSILVD  248 (254)
T ss_pred             HHHHhhcccccCCccCcEEEec
Confidence            99999998754  235444433

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).

>PRK07062 short chain dehydrogenase; Provisional

Probab=99.60  E-value=5.4e-14  Score=122.42  Aligned_cols=220  Identities=14%  Similarity=0.024  Sum_probs=134.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCC----C--CCCccCCCeeecCCcchhhhc-------C
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP----G--KKTRFFPGVMIAEEPQWRDCI-------Q  115 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~--~~~~~~~~~d~~~~~~~~~~~-------~  115 (355)
                      +.++++||||+|.||+++++.|++.|++|++++|+.++......    .  ........+|+.|.+++.+++       .
T Consensus         7 ~~k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   86 (265)
T PRK07062          7 EGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAAVEARFG   86 (265)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHHHHhcC
Confidence            34789999999999999999999999999999998765432211    0  000112346888888776554       3


Q ss_pred             CCcEEEECCCCCCC---CCCChhhHHHHHHHhhhhHHHHHHHHHcC--CCCCCcEEEEeeeeeeeeCCCCCccccCCCCC
Q 018503          116 GSTAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPS  190 (355)
Q Consensus       116 ~~d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~  190 (355)
                      .+|++||+||....   .....+.+...+++|+.+...+++++...  ..+..++|++||...  +..         .+.
T Consensus        87 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~--~~~---------~~~  155 (265)
T PRK07062         87 GVDMLVNNAGQGRVSTFADTTDDAWRDELELKYFSVINPTRAFLPLLRASAAASIVCVNSLLA--LQP---------EPH  155 (265)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCcEEEEeccccc--cCC---------CCC
Confidence            57999999997432   22344566778888888766666554321  134568999999765  321         112


Q ss_pred             CChh-HHHHHHHHHHHHhcc---CCCCeEEEEEecEEEeCCCCc-cc-------chHHHHHHH-hCCCCCCCCcceeccc
Q 018503          191 GNDY-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGA-LA-------KMIPLFMMF-AGGPLGSGQQWFSWIH  257 (355)
Q Consensus       191 ~~~y-~~k~~~~~~~~~~~~---~~~~~~~i~Rp~~i~G~~~~~-~~-------~~~~~~~~~-~~~~~~~~~~~~~~i~  257 (355)
                      ...| .+|.....+.+.+..   ..|++++.++||.+..+.... +.       .+....+.. ....+    ....+..
T Consensus       156 ~~~y~asKaal~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----p~~r~~~  231 (265)
T PRK07062        156 MVATSAARAGLLNLVKSLATELAPKGVRVNSILLGLVESGQWRRRYEARADPGQSWEAWTAALARKKGI----PLGRLGR  231 (265)
T ss_pred             chHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccchhhhHHHHhhccCCChHHHHHHHhhcCCC----CcCCCCC
Confidence            2346 556544444433322   248999999999987653111 00       000000000 00000    1123678


Q ss_pred             HHHHHHHHHHHHhCCC---CCCceEecCC
Q 018503          258 LDDIVNLIYEALSNPS---YRGVINGTAP  283 (355)
Q Consensus       258 v~Dva~~~~~~~~~~~---~~~~~~i~~~  283 (355)
                      .+|+|++++.++....   .+.++.+.+|
T Consensus       232 p~~va~~~~~L~s~~~~~~tG~~i~vdgg  260 (265)
T PRK07062        232 PDEAARALFFLASPLSSYTTGSHIDVSGG  260 (265)
T ss_pred             HHHHHHHHHHHhCchhcccccceEEEcCc
Confidence            8999999999987533   3346666555

>PRK05884 short chain dehydrogenase; Provisional

Probab=99.60  E-value=4.8e-14  Score=119.30  Aligned_cols=199  Identities=10%  Similarity=0.070  Sum_probs=133.8

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcC----CCcEEEECCCC
Q 018503           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ----GSTAVVNLAGT  126 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~----~~d~vi~~a~~  126 (355)
                      ||++||||+|.||+++++.|+++|++|++++|+.++......... .....+|+.|++++.++++    ++|++||+|+.
T Consensus         1 m~vlItGas~giG~~ia~~l~~~g~~v~~~~r~~~~~~~~~~~~~-~~~~~~D~~~~~~v~~~~~~~~~~id~lv~~ag~   79 (223)
T PRK05884          1 VEVLVTGGDTDLGRTIAEGFRNDGHKVTLVGARRDDLEVAAKELD-VDAIVCDNTDPASLEEARGLFPHHLDTIVNVPAP   79 (223)
T ss_pred             CeEEEEeCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcc-CcEEecCCCCHHHHHHHHHHHhhcCcEEEECCCc
Confidence            579999999999999999999999999999998765433221110 0134578888888877664    58999999974


Q ss_pred             CCC---C---CC--ChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCChh-HHH
Q 018503          127 PIG---T---RW--SSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-LAE  197 (355)
Q Consensus       127 ~~~---~---~~--~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~~y-~~k  197 (355)
                      ...   .   ..  ..+.+...+++|+.++..+++++...-....++|++||...               +....| .+|
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~Iv~isS~~~---------------~~~~~Y~asK  144 (223)
T PRK05884         80 SWDAGDPRTYSLADTANAWRNALDATVLSAVLTVQSVGDHLRSGGSIISVVPENP---------------PAGSAEAAIK  144 (223)
T ss_pred             cccCCCCcccchhcCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCeEEEEecCCC---------------CCccccHHHH
Confidence            210   0   11  24567888999999999999887552112368999987531               123457 777


Q ss_pred             HHHHHHHHHhcc---CCCCeEEEEEecEEEeCCCCcccchHHHHHHHhCCCCCCCCcceecccHHHHHHHHHHHHhCCC-
Q 018503          198 VCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPS-  273 (355)
Q Consensus       198 ~~~~~~~~~~~~---~~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~-  273 (355)
                      .....+.+.+..   ..|+++..+.||.+..+..          ......         +.-..+|+++++..++.... 
T Consensus       145 aal~~~~~~la~e~~~~gI~v~~v~PG~v~t~~~----------~~~~~~---------p~~~~~~ia~~~~~l~s~~~~  205 (223)
T PRK05884        145 AALSNWTAGQAAVFGTRGITINAVACGRSVQPGY----------DGLSRT---------PPPVAAEIARLALFLTTPAAR  205 (223)
T ss_pred             HHHHHHHHHHHHHhhhcCeEEEEEecCccCchhh----------hhccCC---------CCCCHHHHHHHHHHHcCchhh
Confidence            666655554443   2489999999998864421          000000         11278999999999987543 


Q ss_pred             --CCCceEecCCC
Q 018503          274 --YRGVINGTAPN  284 (355)
Q Consensus       274 --~~~~~~i~~~~  284 (355)
                        .+.++.+.+|.
T Consensus       206 ~v~G~~i~vdgg~  218 (223)
T PRK05884        206 HITGQTLHVSHGA  218 (223)
T ss_pred             ccCCcEEEeCCCe
Confidence              33456665554

>PRK08340 glucose-1-dehydrogenase; Provisional

Probab=99.60  E-value=3.8e-14  Score=122.95  Aligned_cols=216  Identities=15%  Similarity=0.082  Sum_probs=132.2

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCC---CCCccCCCeeecCCcchhhhc-------CCCcEE
Q 018503           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG---KKTRFFPGVMIAEEPQWRDCI-------QGSTAV  120 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~---~~~~~~~~~d~~~~~~~~~~~-------~~~d~v  120 (355)
                      |+|+||||+|.||++++++|+++|++|++++|+.+........   ........+|+.|.+++.+++       .++|++
T Consensus         1 m~vlItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~g~id~l   80 (259)
T PRK08340          1 MNVLVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKEYGEVYAVKADLSDKDDLKNLVKEAWELLGGIDAL   80 (259)
T ss_pred             CeEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEcCCCCHHHHHHHHHHHHHhcCCCCEE
Confidence            6899999999999999999999999999999987653322110   001113457888888777665       368999


Q ss_pred             EECCCCCCC-----CCCChhhHHHHHHHhhhhHHHHHHH----HHcCCCCCCcEEEEeeeeeeeeCCCCCccccCCCCCC
Q 018503          121 VNLAGTPIG-----TRWSSEIKKEIKESRIRVTSKVVDL----INESPEGVRPSVLVSATALGYYGTSETEVFDESSPSG  191 (355)
Q Consensus       121 i~~a~~~~~-----~~~~~~~~~~~~~~n~~~~~~l~~a----~~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~  191 (355)
                      ||+||....     .....++....+.+|+.+...+...    +.+ ..+.+++|++||...  ...         .+..
T Consensus        81 i~naG~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~-~~~~g~iv~isS~~~--~~~---------~~~~  148 (259)
T PRK08340         81 VWNAGNVRCEPCMLHEAGYSDWLEAALLHLVAPGYLTTLLIQAWLE-KKMKGVLVYLSSVSV--KEP---------MPPL  148 (259)
T ss_pred             EECCCCCCCCccccccccHHHHHHHHhhcchHHHHHHHHHHHHHHh-cCCCCEEEEEeCccc--CCC---------CCCc
Confidence            999996421     1222334455567777665444333    221 034568999998765  221         1223


Q ss_pred             Chh-HHHHHHHHHHHHhccC---CCCeEEEEEecEEEeCCCCc-ccch-------HHH-H--HHHhCCCCCCCCcceecc
Q 018503          192 NDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGA-LAKM-------IPL-F--MMFAGGPLGSGQQWFSWI  256 (355)
Q Consensus       192 ~~y-~~k~~~~~~~~~~~~~---~~~~~~i~Rp~~i~G~~~~~-~~~~-------~~~-~--~~~~~~~~~~~~~~~~~i  256 (355)
                      ..| .+|.....+.+.+..+   .|+++..+.||.+-.+.... ....       .+. .  ......+      ...+.
T Consensus       149 ~~y~~sKaa~~~~~~~la~e~~~~gI~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p------~~r~~  222 (259)
T PRK08340        149 VLADVTRAGLVQLAKGVSRTYGGKGIRAYTVLLGSFDTPGARENLARIAEERGVSFEETWEREVLERTP------LKRTG  222 (259)
T ss_pred             hHHHHHHHHHHHHHHHHHHHhCCCCEEEEEeccCcccCccHHHHHHhhhhccCCchHHHHHHHHhccCC------ccCCC
Confidence            456 6776666555554443   47999999999886653211 0000       000 0  0011111      12367


Q ss_pred             cHHHHHHHHHHHHhCCC--CCC-ceEecCCC
Q 018503          257 HLDDIVNLIYEALSNPS--YRG-VINGTAPN  284 (355)
Q Consensus       257 ~v~Dva~~~~~~~~~~~--~~~-~~~i~~~~  284 (355)
                      ..+|+|++++.++..+.  ..| +..+.+|.
T Consensus       223 ~p~dva~~~~fL~s~~~~~itG~~i~vdgg~  253 (259)
T PRK08340        223 RWEELGSLIAFLLSENAEYMLGSTIVFDGAM  253 (259)
T ss_pred             CHHHHHHHHHHHcCcccccccCceEeecCCc
Confidence            88999999999998643  233 55555553

>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.59  E-value=6.4e-14  Score=121.31  Aligned_cols=213  Identities=15%  Similarity=0.021  Sum_probs=135.2

Q ss_pred             CCEEEEEcCCc--hHHHHHHHHHHhCCCeEEEEecCCch-----------h----hccCCCCCCccCCCeeecCCcchhh
Q 018503           50 QMTVSVTGATG--FIGRRLVQRLQADNHQVRVLTRSRSK-----------A----ELIFPGKKTRFFPGVMIAEEPQWRD  112 (355)
Q Consensus        50 ~~~IlVtGatG--~iG~~l~~~L~~~g~~V~~~~r~~~~-----------~----~~~~~~~~~~~~~~~d~~~~~~~~~  112 (355)
                      +++||||||+|  .||.+++++|++.|++|++++|++..           .    ..............+|+.+.+++.+
T Consensus         5 ~k~vlItGas~~~giG~~la~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~   84 (256)
T PRK12748          5 KKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIESYGVRCEHMEIDLSQPYAPNR   84 (256)
T ss_pred             CcEEEEeCCCCCCCHHHHHHHHHHHcCCcEEEEcCCccccccccccchhhHHHHHHHHHhcCCeEEEEECCCCCHHHHHH
Confidence            46899999996  69999999999999999999987221           0    0000000011134578888877655


Q ss_pred             hc-------CCCcEEEECCCCCCCC---CCChhhHHHHHHHhhhhHHHHHHHHHcC--CCCCCcEEEEeeeeeeeeCCCC
Q 018503          113 CI-------QGSTAVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSE  180 (355)
Q Consensus       113 ~~-------~~~d~vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~~~~v~~Ss~~~~~yg~~~  180 (355)
                      ++       ..+|+|||+||.....   ....+.++..+++|+.++..+++++...  ..+.+++|++||...  ++.. 
T Consensus        85 ~~~~~~~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~--~~~~-  161 (256)
T PRK12748         85 VFYAVSERLGDPSILINNAAYSTHTRLEELTAEQLDKHYAVNVRATMLLSSAFAKQYDGKAGGRIINLTSGQS--LGPM-  161 (256)
T ss_pred             HHHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcCCeEEEEECCccc--cCCC-
Confidence            44       3579999999874221   2234556778999999999999887541  124468999998765  4321 


Q ss_pred             CccccCCCCCCChh-HHHHHHHHHHHHhccC---CCCeEEEEEecEEEeCCCCcccchHHHHHHHhCCCCCCCCcceecc
Q 018503          181 TEVFDESSPSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWI  256 (355)
Q Consensus       181 ~~~~~e~~~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  256 (355)
                              +....| .+|...+.+...+..+   .+++++.++|+.+..+....  ....   .......     ...+.
T Consensus       162 --------~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~~~t~~~~~--~~~~---~~~~~~~-----~~~~~  223 (256)
T PRK12748        162 --------PDELAYAATKGAIEAFTKSLAPELAEKGITVNAVNPGPTDTGWITE--ELKH---HLVPKFP-----QGRVG  223 (256)
T ss_pred             --------CCchHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEEeCcccCCCCCh--hHHH---hhhccCC-----CCCCc
Confidence                    123457 7777666655544332   48999999999876553211  1111   0111100     11245


Q ss_pred             cHHHHHHHHHHHHhCCC---CCCceEecCC
Q 018503          257 HLDDIVNLIYEALSNPS---YRGVINGTAP  283 (355)
Q Consensus       257 ~v~Dva~~~~~~~~~~~---~~~~~~i~~~  283 (355)
                      ..+|+|+++..++....   .+.++++.++
T Consensus       224 ~~~~~a~~~~~l~~~~~~~~~g~~~~~d~g  253 (256)
T PRK12748        224 EPVDAARLIAFLVSEEAKWITGQVIHSEGG  253 (256)
T ss_pred             CHHHHHHHHHHHhCcccccccCCEEEecCC
Confidence            67999999998887533   2446677655

>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.59  E-value=1e-13  Score=120.91  Aligned_cols=219  Identities=12%  Similarity=0.063  Sum_probs=138.2

Q ss_pred             CCCEEEEEcCCc--hHHHHHHHHHHhCCCeEEEEecCCchh---hccCCCCCCccCCCeeecCCcchhhhc-------CC
Q 018503           49 SQMTVSVTGATG--FIGRRLVQRLQADNHQVRVLTRSRSKA---ELIFPGKKTRFFPGVMIAEEPQWRDCI-------QG  116 (355)
Q Consensus        49 ~~~~IlVtGatG--~iG~~l~~~L~~~g~~V~~~~r~~~~~---~~~~~~~~~~~~~~~d~~~~~~~~~~~-------~~  116 (355)
                      +.+++|||||++  .||++++++|++.|++|++.+|+....   ..+...........+|+.|.+++.+++       ..
T Consensus         6 ~~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~g~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   85 (271)
T PRK06505          6 QGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEALGKRVKPLAESLGSDFVLPCDVEDIASVDAVFEALEKKWGK   85 (271)
T ss_pred             CCCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCchHHHHHHHHHHHhcCCceEEeCCCCCHHHHHHHHHHHHHHhCC
Confidence            457899999997  999999999999999999998875321   111111000113457999988777665       35


Q ss_pred             CcEEEECCCCCCC-------CCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCCCCccccCCCC
Q 018503          117 STAVVNLAGTPIG-------TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSP  189 (355)
Q Consensus       117 ~d~vi~~a~~~~~-------~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~  189 (355)
                      +|++|||||....       ...+.+.+...+++|+.++..+++++...-....++|++||...  ..         ..+
T Consensus        86 iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~m~~~G~Iv~isS~~~--~~---------~~~  154 (271)
T PRK06505         86 LDFVVHAIGFSDKNELKGRYADTTRENFSRTMVISCFSFTEIAKRAAKLMPDGGSMLTLTYGGS--TR---------VMP  154 (271)
T ss_pred             CCEEEECCccCCCccccCChhhcCHHHHHHHHhhhhhhHHHHHHHHHHhhccCceEEEEcCCCc--cc---------cCC
Confidence            8999999996421       13345667888899999998888776542012358999998654  11         012


Q ss_pred             CCChh-HHHHHHHHHHHHhccC---CCCeEEEEEecEEEeCCCCcccchHHHHHHH-hCCCCCCCCcceecccHHHHHHH
Q 018503          190 SGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMF-AGGPLGSGQQWFSWIHLDDIVNL  264 (355)
Q Consensus       190 ~~~~y-~~k~~~~~~~~~~~~~---~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~v~Dva~~  264 (355)
                      ....| .+|.....+.+.+..+   .|+++..+.||.+..+............... ...++      ..+...+|+|++
T Consensus       155 ~~~~Y~asKaAl~~l~r~la~el~~~gIrVn~v~PG~i~T~~~~~~~~~~~~~~~~~~~~p~------~r~~~peeva~~  228 (271)
T PRK06505        155 NYNVMGVAKAALEASVRYLAADYGPQGIRVNAISAGPVRTLAGAGIGDARAIFSYQQRNSPL------RRTVTIDEVGGS  228 (271)
T ss_pred             ccchhhhhHHHHHHHHHHHHHHHhhcCeEEEEEecCCccccccccCcchHHHHHHHhhcCCc------cccCCHHHHHHH
Confidence            23457 7776665555444433   4899999999998765321111100011111 11111      125678999999


Q ss_pred             HHHHHhCCC--CCC-ceEecCCC
Q 018503          265 IYEALSNPS--YRG-VINGTAPN  284 (355)
Q Consensus       265 ~~~~~~~~~--~~~-~~~i~~~~  284 (355)
                      ++.++....  ..| .+.+.+|.
T Consensus       229 ~~fL~s~~~~~itG~~i~vdgG~  251 (271)
T PRK06505        229 ALYLLSDLSSGVTGEIHFVDSGY  251 (271)
T ss_pred             HHHHhCccccccCceEEeecCCc
Confidence            999997543  233 55555553

>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated

Probab=99.58  E-value=1.8e-13  Score=124.26  Aligned_cols=189  Identities=16%  Similarity=0.132  Sum_probs=122.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCC-CCCccCCCeeecCCcchhhhcCCCcEEEECCCCC
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-KKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTP  127 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~~  127 (355)
                      ++++|+||||+|+||++++++|.++|++|++++|+.++....... ........+|+.|.+++.+.+.++|++||+||..
T Consensus       177 ~gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~~~l~~~~~~~~~~v~~v~~Dvsd~~~v~~~l~~IDiLInnAGi~  256 (406)
T PRK07424        177 KGKTVAVTGASGTLGQALLKELHQQGAKVVALTSNSDKITLEINGEDLPVKTLHWQVGQEAALAELLEKVDILIINHGIN  256 (406)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhcCCCeEEEEeeCCCHHHHHHHhCCCCEEEECCCcC
Confidence            457999999999999999999999999999999987554321110 0000123468889989988899999999999875


Q ss_pred             CCCCCChhhHHHHHHHhhhhHHHHHHHHHcC--CCC---CCc-EEEEeeeeeeeeCCCCCccccCCCCCCChh-HHHHHH
Q 018503          128 IGTRWSSEIKKEIKESRIRVTSKVVDLINES--PEG---VRP-SVLVSATALGYYGTSETEVFDESSPSGNDY-LAEVCR  200 (355)
Q Consensus       128 ~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~---~~~-~v~~Ss~~~~~yg~~~~~~~~e~~~~~~~y-~~k~~~  200 (355)
                      .....+.+.....+++|+.++..+++++...  ..+   .+. +|.+|+ +.  ..          .+..+.| .+|...
T Consensus       257 ~~~~~s~e~~~~~~~vNv~g~i~Li~a~lp~m~~~~~~~~~~iiVn~Ss-a~--~~----------~~~~~~Y~ASKaAl  323 (406)
T PRK07424        257 VHGERTPEAINKSYEVNTFSAWRLMELFFTTVKTNRDKATKEVWVNTSE-AE--VN----------PAFSPLYELSKRAL  323 (406)
T ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCeEEEEEcc-cc--cc----------CCCchHHHHHHHHH
Confidence            3344556677889999999999999886431  011   122 333332 11  11          1123458 777766


Q ss_pred             HHHHHHhccCCCCeEEEEEecEEEeCCCCcccchHHHHHHHhCCCCCCCCcceecccHHHHHHHHHHHHhCCC
Q 018503          201 EWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPS  273 (355)
Q Consensus       201 ~~~~~~~~~~~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~  273 (355)
                      ...........+..+..+.|+    +.....               .    ....+..+|+|+.++.+++++.
T Consensus       324 ~~l~~l~~~~~~~~I~~i~~g----p~~t~~---------------~----~~~~~spe~vA~~il~~i~~~~  373 (406)
T PRK07424        324 GDLVTLRRLDAPCVVRKLILG----PFKSNL---------------N----PIGVMSADWVAKQILKLAKRDF  373 (406)
T ss_pred             HHHHHHHHhCCCCceEEEEeC----CCcCCC---------------C----cCCCCCHHHHHHHHHHHHHCCC
Confidence            555444333334444444443    321110               0    0124788999999999998764

>PRK08936 glucose-1-dehydrogenase; Provisional

Probab=99.58  E-value=2.2e-13  Score=118.30  Aligned_cols=216  Identities=14%  Similarity=0.039  Sum_probs=132.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchh-hcc----CCCCCCccCCCeeecCCcchhhhcC-------C
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKA-ELI----FPGKKTRFFPGVMIAEEPQWRDCIQ-------G  116 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~~----~~~~~~~~~~~~d~~~~~~~~~~~~-------~  116 (355)
                      +.++++||||+|.||++++++|+++|+.|+++.|+.... ...    ...........+|+.|.+++.++++       .
T Consensus         6 ~~k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g~   85 (261)
T PRK08936          6 EGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKAGGEAIAVKGDVTVESDVVNLIQTAVKEFGT   85 (261)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            457999999999999999999999999999888864321 111    1111101133568888887766553       5


Q ss_pred             CcEEEECCCCCCCC---CCChhhHHHHHHHhhhhHHHHHH----HHHcCCCC-CCcEEEEeeeeeeeeCCCCCccccCCC
Q 018503          117 STAVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVD----LINESPEG-VRPSVLVSATALGYYGTSETEVFDESS  188 (355)
Q Consensus       117 ~d~vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~----a~~~~~~~-~~~~v~~Ss~~~~~yg~~~~~~~~e~~  188 (355)
                      +|++||+||.....   ....+.+...+++|+.++..+++    .+.+  .+ .+++|++||...  +..         .
T Consensus        86 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~--~~~~g~iv~~sS~~~--~~~---------~  152 (261)
T PRK08936         86 LDVMINNAGIENAVPSHEMSLEDWNKVINTNLTGAFLGSREAIKYFVE--HDIKGNIINMSSVHE--QIP---------W  152 (261)
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHh--cCCCcEEEEEccccc--cCC---------C
Confidence            89999999974322   23446667788999888765544    4444  23 358999988643  211         1


Q ss_pred             CCCChh-HHHHHHHHHHHHhcc---CCCCeEEEEEecEEEeCCCC-cccchHHHHHHHhCCCCCCCCcceecccHHHHHH
Q 018503          189 PSGNDY-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGG-ALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVN  263 (355)
Q Consensus       189 ~~~~~y-~~k~~~~~~~~~~~~---~~~~~~~i~Rp~~i~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~  263 (355)
                      +....| .+|...+.+.+.+..   ..+++++.++|+.+..+... ...............++      ..+...+|+++
T Consensus       153 ~~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~va~  226 (261)
T PRK08936        153 PLFVHYAASKGGVKLMTETLAMEYAPKGIRVNNIGPGAINTPINAEKFADPKQRADVESMIPM------GYIGKPEEIAA  226 (261)
T ss_pred             CCCcccHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECcCCCCccccccCCHHHHHHHHhcCCC------CCCcCHHHHHH
Confidence            233456 666544444333322   24899999999999877432 11110000011111121      23677899999


Q ss_pred             HHHHHHhCCC--CCC-ceEecCC
Q 018503          264 LIYEALSNPS--YRG-VINGTAP  283 (355)
Q Consensus       264 ~~~~~~~~~~--~~~-~~~i~~~  283 (355)
                      .+..++....  ..| .+.+.++
T Consensus       227 ~~~~l~s~~~~~~~G~~i~~d~g  249 (261)
T PRK08936        227 VAAWLASSEASYVTGITLFADGG  249 (261)
T ss_pred             HHHHHcCcccCCccCcEEEECCC
Confidence            9999988643  344 4444444

>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.58  E-value=1.6e-13  Score=118.84  Aligned_cols=218  Identities=12%  Similarity=0.023  Sum_probs=136.8

Q ss_pred             CCCEEEEEcCC--chHHHHHHHHHHhCCCeEEEEecCCchh---hccCCCCCCccCCCeeecCCcchhhhc-------CC
Q 018503           49 SQMTVSVTGAT--GFIGRRLVQRLQADNHQVRVLTRSRSKA---ELIFPGKKTRFFPGVMIAEEPQWRDCI-------QG  116 (355)
Q Consensus        49 ~~~~IlVtGat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~---~~~~~~~~~~~~~~~d~~~~~~~~~~~-------~~  116 (355)
                      ..++++||||+  +.||++++++|++.|++|++++|+.+..   ..+...........+|+.|.+++.+++       ..
T Consensus         9 ~~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   88 (258)
T PRK07533          9 AGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKARPYVEPLAEELDAPIFLPLDVREPGQLEAVFARIAEEWGR   88 (258)
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHHHhhccceEEecCcCCHHHHHHHHHHHHHHcCC
Confidence            35789999998  5999999999999999999999975432   111111000113457999888776655       35


Q ss_pred             CcEEEECCCCCCC-------CCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCCCCccccCCCC
Q 018503          117 STAVVNLAGTPIG-------TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSP  189 (355)
Q Consensus       117 ~d~vi~~a~~~~~-------~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~  189 (355)
                      +|++|||||....       .+.+.+.+...+++|+.++..+++++...-....++|++||...  ..         ..+
T Consensus        89 ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~g~Ii~iss~~~--~~---------~~~  157 (258)
T PRK07533         89 LDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTNGGSLLTMSYYGA--EK---------VVE  157 (258)
T ss_pred             CCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhccCCEEEEEecccc--cc---------CCc
Confidence            7999999996421       12355677889999999999988876542112357888887543  11         012


Q ss_pred             CCChh-HHHHHHHHHHHHhcc---CCCCeEEEEEecEEEeCCCCcccchHHHH-HHHhCCCCCCCCcceecccHHHHHHH
Q 018503          190 SGNDY-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALAKMIPLF-MMFAGGPLGSGQQWFSWIHLDDIVNL  264 (355)
Q Consensus       190 ~~~~y-~~k~~~~~~~~~~~~---~~~~~~~i~Rp~~i~G~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~v~Dva~~  264 (355)
                      ....| .+|.....+.+.+..   ..|+++..+.||.+-.+............ ......+.      ..+...+|+|++
T Consensus       158 ~~~~Y~asKaal~~l~~~la~el~~~gI~Vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~------~r~~~p~dva~~  231 (258)
T PRK07533        158 NYNLMGPVKAALESSVRYLAAELGPKGIRVHAISPGPLKTRAASGIDDFDALLEDAAERAPL------RRLVDIDDVGAV  231 (258)
T ss_pred             cchhhHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCcCChhhhccCCcHHHHHHHHhcCCc------CCCCCHHHHHHH
Confidence            23456 677665555544433   24899999999988665321111111111 11111111      136788999999


Q ss_pred             HHHHHhCCC--CCC-ceEecCC
Q 018503          265 IYEALSNPS--YRG-VINGTAP  283 (355)
Q Consensus       265 ~~~~~~~~~--~~~-~~~i~~~  283 (355)
                      ++.++....  ..| .+.+.++
T Consensus       232 ~~~L~s~~~~~itG~~i~vdgg  253 (258)
T PRK07533        232 AAFLASDAARRLTGNTLYIDGG  253 (258)
T ss_pred             HHHHhChhhccccCcEEeeCCc
Confidence            999997643  233 5545444

>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

Probab=99.58  E-value=4.7e-14  Score=122.66  Aligned_cols=219  Identities=17%  Similarity=0.053  Sum_probs=137.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCC-CccCCCeeecCCcchhhhcC-------CCcEE
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKK-TRFFPGVMIAEEPQWRDCIQ-------GSTAV  120 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~d~~~~~~~~~~~~-------~~d~v  120 (355)
                      .+++++||||+|+||++++++|++.|++|++++|+.+.......... ......+|+.|.+++.++++       .+|++
T Consensus         5 ~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   84 (263)
T PRK06200          5 HGQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQRFGDHVLVVEGDVTSYADNQRAVDQTVDAFGKLDCF   84 (263)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHhcCCCCEE
Confidence            34789999999999999999999999999999998765443321110 01134568888877765553       58999


Q ss_pred             EECCCCCCC-C---CCChhh----HHHHHHHhhhhHHHHHHHHHcC-CCCCCcEEEEeeeeeeeeCCCCCccccCCCCCC
Q 018503          121 VNLAGTPIG-T---RWSSEI----KKEIKESRIRVTSKVVDLINES-PEGVRPSVLVSATALGYYGTSETEVFDESSPSG  191 (355)
Q Consensus       121 i~~a~~~~~-~---~~~~~~----~~~~~~~n~~~~~~l~~a~~~~-~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~  191 (355)
                      ||+||.... .   ....+.    ++..+++|+.++..+++++... .....++|++||...  +...         +..
T Consensus        85 i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~--~~~~---------~~~  153 (263)
T PRK06200         85 VGNAGIWDYNTSLVDIPAETLDTAFDEIFNVNVKGYLLGAKAALPALKASGGSMIFTLSNSS--FYPG---------GGG  153 (263)
T ss_pred             EECCCCcccCCCcccCChhHHHHHHHHHeeeccHhHHHHHHHHHHHHHhcCCEEEEECChhh--cCCC---------CCC
Confidence            999996421 1   112222    5567889999988888777542 122357999998765  3211         123


Q ss_pred             Chh-HHHHHHHHHHHHhccCC--CCeEEEEEecEEEeCCCCcc-----cc---hHH-HHHHHhCCCCCCCCcceecccHH
Q 018503          192 NDY-LAEVCREWEGTALKVNK--DVRLALIRIGIVLGKDGGAL-----AK---MIP-LFMMFAGGPLGSGQQWFSWIHLD  259 (355)
Q Consensus       192 ~~y-~~k~~~~~~~~~~~~~~--~~~~~i~Rp~~i~G~~~~~~-----~~---~~~-~~~~~~~~~~~~~~~~~~~i~v~  259 (355)
                      ..| .+|...+.+...+..+.  ++++..+.||.+..+.....     ..   ..+ .......     ......+...+
T Consensus       154 ~~Y~~sK~a~~~~~~~la~el~~~Irvn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~p~~r~~~~~  228 (263)
T PRK06200        154 PLYTASKHAVVGLVRQLAYELAPKIRVNGVAPGGTVTDLRGPASLGQGETSISDSPGLADMIAA-----ITPLQFAPQPE  228 (263)
T ss_pred             chhHHHHHHHHHHHHHHHHHHhcCcEEEEEeCCccccCCcCccccCCCCcccccccchhHHhhc-----CCCCCCCCCHH
Confidence            457 77776666555444432  58999999999876532110     00   001 0011110     01112467889


Q ss_pred             HHHHHHHHHHhCC-C---CCCceEecCC
Q 018503          260 DIVNLIYEALSNP-S---YRGVINGTAP  283 (355)
Q Consensus       260 Dva~~~~~~~~~~-~---~~~~~~i~~~  283 (355)
                      |+|++++.++... .   .+..+.+.+|
T Consensus       229 eva~~~~fl~s~~~~~~itG~~i~vdgG  256 (263)
T PRK06200        229 DHTGPYVLLASRRNSRALTGVVINADGG  256 (263)
T ss_pred             HHhhhhhheecccccCcccceEEEEcCc
Confidence            9999999998765 3   3335666555

>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.58  E-value=1.9e-13  Score=118.41  Aligned_cols=218  Identities=15%  Similarity=0.080  Sum_probs=135.6

Q ss_pred             CCCEEEEEcCCc--hHHHHHHHHHHhCCCeEEEEecCCc---hhhccCCCCCCccCCCeeecCCcchhhhcC-------C
Q 018503           49 SQMTVSVTGATG--FIGRRLVQRLQADNHQVRVLTRSRS---KAELIFPGKKTRFFPGVMIAEEPQWRDCIQ-------G  116 (355)
Q Consensus        49 ~~~~IlVtGatG--~iG~~l~~~L~~~g~~V~~~~r~~~---~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-------~  116 (355)
                      .+++++||||++  .||+++++.|++.|++|+..+|+..   ....+...........+|+.|++++.++++       .
T Consensus         5 ~~k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~   84 (262)
T PRK07984          5 SGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLPCDVAEDASIDAMFAELGKVWPK   84 (262)
T ss_pred             CCCEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecchhHHHHHHHHHhccCCceEeecCCCCHHHHHHHHHHHHhhcCC
Confidence            457899999985  8999999999999999998888732   111111111111134579999888876663       4


Q ss_pred             CcEEEECCCCCCCC--------CCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCCCCccccCCC
Q 018503          117 STAVVNLAGTPIGT--------RWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESS  188 (355)
Q Consensus       117 ~d~vi~~a~~~~~~--------~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~  188 (355)
                      +|++|||||.....        ....+.+...+++|+.+...+.+++........++|++||.+.  ..         ..
T Consensus        85 iD~linnAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~iss~~~--~~---------~~  153 (262)
T PRK07984         85 FDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGA--ER---------AI  153 (262)
T ss_pred             CCEEEECCccCCccccCCcchhhcCHHHHHHHhhhhhHHHHHHHHHHHHHhcCCcEEEEEecCCC--CC---------CC
Confidence            79999999964221        1234556678899999888887776432112357889887543  11         01


Q ss_pred             CCCChh-HHHHHHHHHHHHhcc---CCCCeEEEEEecEEEeCCCCcccchHHHHHH-HhCCCCCCCCcceecccHHHHHH
Q 018503          189 PSGNDY-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALAKMIPLFMM-FAGGPLGSGQQWFSWIHLDDIVN  263 (355)
Q Consensus       189 ~~~~~y-~~k~~~~~~~~~~~~---~~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~v~Dva~  263 (355)
                      +....| .+|...+.+.+.+..   ..|+++..+.||.+..+.............. ....+.      ..+...+|+|+
T Consensus       154 ~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~------~r~~~pedva~  227 (262)
T PRK07984        154 PNYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPI------RRTVTIEDVGN  227 (262)
T ss_pred             CCcchhHHHHHHHHHHHHHHHHHhcccCcEEeeeecCcccchHHhcCCchHHHHHHHHHcCCC------cCCCCHHHHHH
Confidence            223457 778766666655544   3489999999998866421111011111111 111111      23678899999


Q ss_pred             HHHHHHhCCC--CCC-ceEecCC
Q 018503          264 LIYEALSNPS--YRG-VINGTAP  283 (355)
Q Consensus       264 ~~~~~~~~~~--~~~-~~~i~~~  283 (355)
                      +++.++....  ..| .+.+.++
T Consensus       228 ~~~~L~s~~~~~itG~~i~vdgg  250 (262)
T PRK07984        228 SAAFLCSDLSAGISGEVVHVDGG  250 (262)
T ss_pred             HHHHHcCcccccccCcEEEECCC
Confidence            9999997643  233 5555554

>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.58  E-value=1.7e-13  Score=118.88  Aligned_cols=219  Identities=13%  Similarity=0.045  Sum_probs=134.5

Q ss_pred             CCCEEEEEcC--CchHHHHHHHHHHhCCCeEEEEecCCch---hhccCCCCCCccCCCeeecCCcchhhhcC-------C
Q 018503           49 SQMTVSVTGA--TGFIGRRLVQRLQADNHQVRVLTRSRSK---AELIFPGKKTRFFPGVMIAEEPQWRDCIQ-------G  116 (355)
Q Consensus        49 ~~~~IlVtGa--tG~iG~~l~~~L~~~g~~V~~~~r~~~~---~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-------~  116 (355)
                      +.++++||||  ++.||+++++.|+++|++|++..|....   ...+...........+|+.|++++.++++       +
T Consensus         5 ~~k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   84 (261)
T PRK08690          5 QGKKILITGMISERSIAYGIAKACREQGAELAFTYVVDKLEERVRKMAAELDSELVFRCDVASDDEINQVFADLGKHWDG   84 (261)
T ss_pred             CCcEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCcHHHHHHHHHHHhccCCceEEECCCCCHHHHHHHHHHHHHHhCC
Confidence            3478999997  6799999999999999999988775321   11121111111134579999888776653       5


Q ss_pred             CcEEEECCCCCCCC--------CCChhhHHHHHHHhhhhHHHHHHHHHcC-CCCCCcEEEEeeeeeeeeCCCCCccccCC
Q 018503          117 STAVVNLAGTPIGT--------RWSSEIKKEIKESRIRVTSKVVDLINES-PEGVRPSVLVSATALGYYGTSETEVFDES  187 (355)
Q Consensus       117 ~d~vi~~a~~~~~~--------~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~  187 (355)
                      +|++|||||.....        ....+.+...+++|+.+...+.+++... .....++|++||...  +..         
T Consensus        85 iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~p~m~~~~g~Iv~iss~~~--~~~---------  153 (261)
T PRK08690         85 LDGLVHSIGFAPKEALSGDFLDSISREAFNTAHEISAYSLPALAKAARPMMRGRNSAIVALSYLGA--VRA---------  153 (261)
T ss_pred             CcEEEECCccCCccccccchhhhcCHHHHHHHHHhchHHHHHHHHHHHHHhhhcCcEEEEEccccc--ccC---------
Confidence            89999999975321        1233455677889998887777655431 122357888887654  211         


Q ss_pred             CCCCChh-HHHHHHHHHHHHhcc---CCCCeEEEEEecEEEeCCCCcccchHHHHHH-HhCCCCCCCCcceecccHHHHH
Q 018503          188 SPSGNDY-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALAKMIPLFMM-FAGGPLGSGQQWFSWIHLDDIV  262 (355)
Q Consensus       188 ~~~~~~y-~~k~~~~~~~~~~~~---~~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~v~Dva  262 (355)
                      .+....| .+|...+.+.+.+..   ..|+++..+.||.+-.+.............. ....++      ..+...+|+|
T Consensus       154 ~~~~~~Y~asKaal~~l~~~la~e~~~~gIrVn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~------~r~~~peevA  227 (261)
T PRK08690        154 IPNYNVMGMAKASLEAGIRFTAACLGKEGIRCNGISAGPIKTLAASGIADFGKLLGHVAAHNPL------RRNVTIEEVG  227 (261)
T ss_pred             CCCcccchhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccchhhhcCCchHHHHHHHhhcCCC------CCCCCHHHHH
Confidence            1233457 677666555444332   3589999999999876532111000111111 111121      2367899999


Q ss_pred             HHHHHHHhCCC---CCCceEecCCC
Q 018503          263 NLIYEALSNPS---YRGVINGTAPN  284 (355)
Q Consensus       263 ~~~~~~~~~~~---~~~~~~i~~~~  284 (355)
                      +++..++....   .+..+.+.+|.
T Consensus       228 ~~v~~l~s~~~~~~tG~~i~vdgG~  252 (261)
T PRK08690        228 NTAAFLLSDLSSGITGEITYVDGGY  252 (261)
T ss_pred             HHHHHHhCcccCCcceeEEEEcCCc
Confidence            99999998643   33355555553

>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.58  E-value=1.1e-13  Score=120.82  Aligned_cols=218  Identities=12%  Similarity=0.038  Sum_probs=137.5

Q ss_pred             CCEEEEEcCC--chHHHHHHHHHHhCCCeEEEEecCCc---hhhccCCCCCCccCCCeeecCCcchhhhc-------CCC
Q 018503           50 QMTVSVTGAT--GFIGRRLVQRLQADNHQVRVLTRSRS---KAELIFPGKKTRFFPGVMIAEEPQWRDCI-------QGS  117 (355)
Q Consensus        50 ~~~IlVtGat--G~iG~~l~~~L~~~g~~V~~~~r~~~---~~~~~~~~~~~~~~~~~d~~~~~~~~~~~-------~~~  117 (355)
                      .++++||||+  +.||+++++.|++.|++|++.+|+..   ................+|+.|.+++.+++       ..+
T Consensus         5 ~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~i~~~~g~i   84 (274)
T PRK08415          5 GKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEALKKRVEPIAQELGSDYVYELDVSKPEHFKSLAESLKKDLGKI   84 (274)
T ss_pred             CcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCceEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            4789999997  79999999999999999999998742   11111111000013457999988877655       357


Q ss_pred             cEEEECCCCCCC-------CCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCCCCccccCCCCC
Q 018503          118 TAVVNLAGTPIG-------TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPS  190 (355)
Q Consensus       118 d~vi~~a~~~~~-------~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~  190 (355)
                      |++|||||....       ...+.+.+...+++|+.++..+.+++...-....++|++||.+.  ..         ..+.
T Consensus        85 DilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~g~Iv~isS~~~--~~---------~~~~  153 (274)
T PRK08415         85 DFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLNDGASVLTLSYLGG--VK---------YVPH  153 (274)
T ss_pred             CEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhccCCcEEEEecCCC--cc---------CCCc
Confidence            999999996421       23345667889999999998888776542112358999998643  11         0122


Q ss_pred             CChh-HHHHHHHHHHHHhccC---CCCeEEEEEecEEEeCCCCcccchHHHHHHH-hCCCCCCCCcceecccHHHHHHHH
Q 018503          191 GNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMF-AGGPLGSGQQWFSWIHLDDIVNLI  265 (355)
Q Consensus       191 ~~~y-~~k~~~~~~~~~~~~~---~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~v~Dva~~~  265 (355)
                      ...| .+|.....+.+.+..+   .|+++..+.||.+..+............... ...+.      ..+...+|+|+++
T Consensus       154 ~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~pl------~r~~~pedva~~v  227 (274)
T PRK08415        154 YNVMGVAKAALESSVRYLAVDLGKKGIRVNAISAGPIKTLAASGIGDFRMILKWNEINAPL------KKNVSIEEVGNSG  227 (274)
T ss_pred             chhhhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccHHHhccchhhHHhhhhhhhCch------hccCCHHHHHHHH
Confidence            3457 7776665555544432   4899999999998764211110100000000 01111      2357789999999


Q ss_pred             HHHHhCCC---CCCceEecCCC
Q 018503          266 YEALSNPS---YRGVINGTAPN  284 (355)
Q Consensus       266 ~~~~~~~~---~~~~~~i~~~~  284 (355)
                      +.++....   .+..+.+.+|.
T Consensus       228 ~fL~s~~~~~itG~~i~vdGG~  249 (274)
T PRK08415        228 MYLLSDLSSGVTGEIHYVDAGY  249 (274)
T ss_pred             HHHhhhhhhcccccEEEEcCcc
Confidence            99998543   33355555553

>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.57  E-value=2.2e-13  Score=118.14  Aligned_cols=218  Identities=12%  Similarity=0.057  Sum_probs=136.7

Q ss_pred             CCCEEEEEcC--CchHHHHHHHHHHhCCCeEEEEecCC---chhhccCCCCCCccCCCeeecCCcchhhhcC-------C
Q 018503           49 SQMTVSVTGA--TGFIGRRLVQRLQADNHQVRVLTRSR---SKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ-------G  116 (355)
Q Consensus        49 ~~~~IlVtGa--tG~iG~~l~~~L~~~g~~V~~~~r~~---~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-------~  116 (355)
                      +.++++||||  ++.||.+++++|++.|++|+++.|..   +....+...........+|+.|++++.++++       .
T Consensus         5 ~~k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   84 (260)
T PRK06997          5 AGKRILITGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFGSDLVFPCDVASDEQIDALFASLGQHWDG   84 (260)
T ss_pred             CCcEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccchHHHHHHHHHHHhcCCcceeeccCCCHHHHHHHHHHHHHHhCC
Confidence            3478999996  67999999999999999999886542   2221111110111134579999988876663       5


Q ss_pred             CcEEEECCCCCCC--------CCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCCCCccccCCC
Q 018503          117 STAVVNLAGTPIG--------TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESS  188 (355)
Q Consensus       117 ~d~vi~~a~~~~~--------~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~  188 (355)
                      +|++||+||....        ...+.+.+...+++|+.++..+.+++...-...+++|++||...  .-         ..
T Consensus        85 iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~lp~m~~~g~Ii~iss~~~--~~---------~~  153 (260)
T PRK06997         85 LDGLVHSIGFAPREAIAGDFLDGLSRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLGA--ER---------VV  153 (260)
T ss_pred             CcEEEEccccCCccccccccchhcCHHHHHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEecccc--cc---------CC
Confidence            8999999997422        12345567788999999998888876553123367999988654  11         11


Q ss_pred             CCCChh-HHHHHHHHHHHHhcc---CCCCeEEEEEecEEEeCCCCcccchHHHHHH-HhCCCCCCCCcceecccHHHHHH
Q 018503          189 PSGNDY-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALAKMIPLFMM-FAGGPLGSGQQWFSWIHLDDIVN  263 (355)
Q Consensus       189 ~~~~~y-~~k~~~~~~~~~~~~---~~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~v~Dva~  263 (355)
                      +....| .+|.....+.+.+..   ..|+++..+.||.+-.+............+. ....++      ..+...+|+|+
T Consensus       154 ~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~------~r~~~pedva~  227 (260)
T PRK06997        154 PNYNTMGLAKASLEASVRYLAVSLGPKGIRANGISAGPIKTLAASGIKDFGKILDFVESNAPL------RRNVTIEEVGN  227 (260)
T ss_pred             CCcchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCccccchhccccchhhHHHHHHhcCcc------cccCCHHHHHH
Confidence            223457 778766665554443   3489999999998866422111000000111 111111      23678899999


Q ss_pred             HHHHHHhCCC---CCCceEecCC
Q 018503          264 LIYEALSNPS---YRGVINGTAP  283 (355)
Q Consensus       264 ~~~~~~~~~~---~~~~~~i~~~  283 (355)
                      ++..++..+.   .+.++.+.++
T Consensus       228 ~~~~l~s~~~~~itG~~i~vdgg  250 (260)
T PRK06997        228 VAAFLLSDLASGVTGEITHVDSG  250 (260)
T ss_pred             HHHHHhCccccCcceeEEEEcCC
Confidence            9999998643   2335555544

>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.57  E-value=2.7e-13  Score=117.62  Aligned_cols=218  Identities=11%  Similarity=0.011  Sum_probs=137.2

Q ss_pred             CCCEEEEEcCCc--hHHHHHHHHHHhCCCeEEEEecCCch---hhccCCCCCCccCCCeeecCCcchhhhcC-------C
Q 018503           49 SQMTVSVTGATG--FIGRRLVQRLQADNHQVRVLTRSRSK---AELIFPGKKTRFFPGVMIAEEPQWRDCIQ-------G  116 (355)
Q Consensus        49 ~~~~IlVtGatG--~iG~~l~~~L~~~g~~V~~~~r~~~~---~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-------~  116 (355)
                      +++.++||||++  .||.++++.|+++|++|+..+|+...   ...+...........+|+.|++++.++++       .
T Consensus         7 ~~k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~~~~~~~~~l~~~~g~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   86 (260)
T PRK06603          7 QGKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSEVLEKRVKPLAEEIGCNFVSELDVTNPKSISNLFDDIKEKWGS   86 (260)
T ss_pred             CCcEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCchHHHHHHHHHHHhcCCceEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            347899999997  79999999999999999998887421   11111110101133579999988776663       5


Q ss_pred             CcEEEECCCCCCC-------CCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCCCCccccCCCC
Q 018503          117 STAVVNLAGTPIG-------TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSP  189 (355)
Q Consensus       117 ~d~vi~~a~~~~~-------~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~  189 (355)
                      +|++||+|+....       .+.+.+.+...+++|+.+...+++++...-....++|++||...  ..         ..+
T Consensus        87 iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~m~~~G~Iv~isS~~~--~~---------~~~  155 (260)
T PRK06603         87 FDFLLHGMAFADKNELKGRYVDTSLENFHNSLHISCYSLLELSRSAEALMHDGGSIVTLTYYGA--EK---------VIP  155 (260)
T ss_pred             ccEEEEccccCCcccccCccccCCHHHHHHHHHHHHHHHHHHHHHHHhhhccCceEEEEecCcc--cc---------CCC
Confidence            8999999986421       23355677889999999999888876432112358999998654  11         012


Q ss_pred             CCChh-HHHHHHHHHHHHhcc---CCCCeEEEEEecEEEeCCCCcccchHHHHH-HHhCCCCCCCCcceecccHHHHHHH
Q 018503          190 SGNDY-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALAKMIPLFM-MFAGGPLGSGQQWFSWIHLDDIVNL  264 (355)
Q Consensus       190 ~~~~y-~~k~~~~~~~~~~~~---~~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~v~Dva~~  264 (355)
                      ....| .+|...+.+.+.+..   ..|+++..+.||.+-.+............. .....+.      ..+...+|+|++
T Consensus       156 ~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~------~r~~~pedva~~  229 (260)
T PRK06603        156 NYNVMGVAKAALEASVKYLANDMGENNIRVNAISAGPIKTLASSAIGDFSTMLKSHAATAPL------KRNTTQEDVGGA  229 (260)
T ss_pred             cccchhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcCcchhhhcCCCcHHHHHHHHhcCCc------CCCCCHHHHHHH
Confidence            23457 777666555544433   358999999999986653111101001111 1111121      135788999999


Q ss_pred             HHHHHhCCC--CCC-ceEecCC
Q 018503          265 IYEALSNPS--YRG-VINGTAP  283 (355)
Q Consensus       265 ~~~~~~~~~--~~~-~~~i~~~  283 (355)
                      ++.++....  ..| .+.+.+|
T Consensus       230 ~~~L~s~~~~~itG~~i~vdgG  251 (260)
T PRK06603        230 AVYLFSELSKGVTGEIHYVDCG  251 (260)
T ss_pred             HHHHhCcccccCcceEEEeCCc
Confidence            999998543  233 5555554

>KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism]

Probab=99.57  E-value=2e-13  Score=121.27  Aligned_cols=207  Identities=22%  Similarity=0.175  Sum_probs=123.9

Q ss_pred             cCCCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCC-CCCCccCC--CeeecC-CcchhhhcC----CCc
Q 018503           47 KASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP-GKKTRFFP--GVMIAE-EPQWRDCIQ----GST  118 (355)
Q Consensus        47 ~~~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-~~~~~~~~--~~d~~~-~~~~~~~~~----~~d  118 (355)
                      +.++++|+|+||||.+|+.+++.|+++|+.|+++.|+......+.. ........  ..+... .+.+..+..    ...
T Consensus        76 ~~~~~~VlVvGatG~vG~~iv~~llkrgf~vra~VRd~~~a~~~~~~~~~d~~~~~v~~~~~~~~d~~~~~~~~~~~~~~  155 (411)
T KOG1203|consen   76 SKKPTTVLVVGATGKVGRRIVKILLKRGFSVRALVRDEQKAEDLLGVFFVDLGLQNVEADVVTAIDILKKLVEAVPKGVV  155 (411)
T ss_pred             CCCCCeEEEecCCCchhHHHHHHHHHCCCeeeeeccChhhhhhhhcccccccccceeeeccccccchhhhhhhhccccce
Confidence            4455799999999999999999999999999999999887766544 11000011  112222 222333332    345


Q ss_pred             EEEECCCCCCCCCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCCh--hHH
Q 018503          119 AVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGND--YLA  196 (355)
Q Consensus       119 ~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~~--y~~  196 (355)
                      +++-+++-....    ++...-..+...+++++++||+.  .+++|++++|+.+..    ...      .++...  ...
T Consensus       156 ~v~~~~ggrp~~----ed~~~p~~VD~~g~knlvdA~~~--aGvk~~vlv~si~~~----~~~------~~~~~~~~~~~  219 (411)
T KOG1203|consen  156 IVIKGAGGRPEE----EDIVTPEKVDYEGTKNLVDACKK--AGVKRVVLVGSIGGT----KFN------QPPNILLLNGL  219 (411)
T ss_pred             eEEecccCCCCc----ccCCCcceecHHHHHHHHHHHHH--hCCceEEEEEeecCc----ccC------CCchhhhhhhh
Confidence            666666532111    11223335788899999999999  899999999886541    001      111111  112


Q ss_pred             HHHHHHHHHHhccCCCCeEEEEEecEEEeCCCCcccchHHHHHHHhCCCCCCCCcceecccHHHHHHHHHHHHhCCCC
Q 018503          197 EVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSY  274 (355)
Q Consensus       197 k~~~~~~~~~~~~~~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~  274 (355)
                      ....+...+.+..++|++++|+||+...-...+.......     .......++..--.+.-.|+|+.++.++..+..
T Consensus       220 ~~~~k~~~e~~~~~Sgl~ytiIR~g~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~i~r~~vael~~~all~~~~  292 (411)
T KOG1203|consen  220 VLKAKLKAEKFLQDSGLPYTIIRPGGLEQDTGGQREVVVD-----DEKELLTVDGGAYSISRLDVAELVAKALLNEAA  292 (411)
T ss_pred             hhHHHHhHHHHHHhcCCCcEEEeccccccCCCCcceeccc-----CccccccccccceeeehhhHHHHHHHHHhhhhh
Confidence            2234444455555689999999999887654322111110     000111111111357889999999999988763

>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional

Probab=99.56  E-value=1.7e-13  Score=117.96  Aligned_cols=199  Identities=16%  Similarity=0.145  Sum_probs=126.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCC----CC-CCccCCCeeec--CCcchhh-------hc
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP----GK-KTRFFPGVMIA--EEPQWRD-------CI  114 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~-~~~~~~~~d~~--~~~~~~~-------~~  114 (355)
                      ..++|+||||+|+||.+++++|++.|++|++++|+......+..    .. .......+|+.  +.+++.+       .+
T Consensus        11 ~~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~   90 (247)
T PRK08945         11 KDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQLADTIEEQF   90 (247)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHhcCCCCceEEEecccCCCHHHHHHHHHHHHHHh
Confidence            45799999999999999999999999999999998755322211    00 00001223443  3433332       33


Q ss_pred             CCCcEEEECCCCCCC----CCCChhhHHHHHHHhhhhHHHHHHHHHcC--CCCCCcEEEEeeeeeeeeCCCCCccccCCC
Q 018503          115 QGSTAVVNLAGTPIG----TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESS  188 (355)
Q Consensus       115 ~~~d~vi~~a~~~~~----~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~  188 (355)
                      ..+|+|||+|+....    .....+.+...+++|+.++..+++++...  ..+.+++|++||.... ++          .
T Consensus        91 ~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~l~~~~~~~iv~~ss~~~~-~~----------~  159 (247)
T PRK08945         91 GRLDGVLHNAGLLGELGPMEQQDPEVWQDVMQVNVNATFMLTQALLPLLLKSPAASLVFTSSSVGR-QG----------R  159 (247)
T ss_pred             CCCCEEEECCcccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEEccHhhc-CC----------C
Confidence            468999999986422    12334667788999999988888776421  1466789999987541 11          1


Q ss_pred             CCCChh-HHHHHHHHHHHHhccC---CCCeEEEEEecEEEeCCCCcccchHHHHHHHhCCCCCCCCcceecccHHHHHHH
Q 018503          189 PSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNL  264 (355)
Q Consensus       189 ~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~  264 (355)
                      +....| .+|...+.....+..+   .+++++.++|+.+-.+....   ..      ..      .....+...+|+++.
T Consensus       160 ~~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~~~~v~pg~v~t~~~~~---~~------~~------~~~~~~~~~~~~~~~  224 (247)
T PRK08945        160 ANWGAYAVSKFATEGMMQVLADEYQGTNLRVNCINPGGTRTAMRAS---AF------PG------EDPQKLKTPEDIMPL  224 (247)
T ss_pred             CCCcccHHHHHHHHHHHHHHHHHhcccCEEEEEEecCCccCcchhh---hc------Cc------ccccCCCCHHHHHHH
Confidence            223457 6776666555444332   37889999999876542110   00      00      001236788999999


Q ss_pred             HHHHHhCCC
Q 018503          265 IYEALSNPS  273 (355)
Q Consensus       265 ~~~~~~~~~  273 (355)
                      +..++....
T Consensus       225 ~~~~~~~~~  233 (247)
T PRK08945        225 YLYLMGDDS  233 (247)
T ss_pred             HHHHhCccc
Confidence            999886543

>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative

Probab=99.56  E-value=2e-13  Score=116.91  Aligned_cols=202  Identities=18%  Similarity=0.130  Sum_probs=129.3

Q ss_pred             EEEEcCCchHHHHHHHHHHhCCCeEEEEecCCch-hhccC----CCCCCccCCCeeecCCcchhhhcC-------CCcEE
Q 018503           53 VSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSK-AELIF----PGKKTRFFPGVMIAEEPQWRDCIQ-------GSTAV  120 (355)
Q Consensus        53 IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~-~~~~~----~~~~~~~~~~~d~~~~~~~~~~~~-------~~d~v  120 (355)
                      |+||||+|+||.++++.|+++|++|++++|+.+. .....    ..........+|+.|.+++.++++       .+|++
T Consensus         1 vlItGas~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i~~l   80 (239)
T TIGR01831         1 VLVTGASRGIGRAIANRLAADGFEICVHYHSGRSDAESVVSAIQAQGGNARLLQFDVADRVACRTLLEADIAEHGAYYGV   80 (239)
T ss_pred             CEEeCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            6899999999999999999999999999876432 11111    111111134578888887766553       57999


Q ss_pred             EECCCCCCCC---CCChhhHHHHHHHhhhhHHHHHHHHHc-C--CCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCChh
Q 018503          121 VNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINE-S--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY  194 (355)
Q Consensus       121 i~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~a~~~-~--~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~~y  194 (355)
                      ||++|.....   ....+++...+++|+.++..+++++.. .  ..+.+++|++||.... ++.          +....|
T Consensus        81 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~-~~~----------~~~~~Y  149 (239)
T TIGR01831        81 VLNAGITRDAAFPALSEEDWDIVIHTNLDGFYNVIHPCTMPMIRARQGGRIITLASVSGV-MGN----------RGQVNY  149 (239)
T ss_pred             EECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcCCeEEEEEcchhhc-cCC----------CCCcch
Confidence            9999964322   235566788999999999998886521 0  0244689999997642 432          123456


Q ss_pred             -HHHHHHHHHHHHhcc---CCCCeEEEEEecEEEeCCCCcccchHHHHHHHhCCCCCCCCcceecccHHHHHHHHHHHHh
Q 018503          195 -LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALS  270 (355)
Q Consensus       195 -~~k~~~~~~~~~~~~---~~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~  270 (355)
                       .+|...+.+.+.+..   ..|++++.++|+.+.++..........  ......++      ..+...+|+|++++.++.
T Consensus       150 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~--~~~~~~~~------~~~~~~~~va~~~~~l~~  221 (239)
T TIGR01831       150 SAAKAGLIGATKALAVELAKRKITVNCIAPGLIDTEMLAEVEHDLD--EALKTVPM------NRMGQPAEVASLAGFLMS  221 (239)
T ss_pred             HHHHHHHHHHHHHHHHHHhHhCeEEEEEEEccCccccchhhhHHHH--HHHhcCCC------CCCCCHHHHHHHHHHHcC
Confidence             666554444433332   248999999999987764322111111  11111121      135678999999999998


Q ss_pred             CCC
Q 018503          271 NPS  273 (355)
Q Consensus       271 ~~~  273 (355)
                      .+.
T Consensus       222 ~~~  224 (239)
T TIGR01831       222 DGA  224 (239)
T ss_pred             chh
Confidence            643

This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.

>PRK06924 short chain dehydrogenase; Provisional

Probab=99.56  E-value=9.8e-14  Score=119.78  Aligned_cols=205  Identities=10%  Similarity=0.042  Sum_probs=127.7

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCc-hhhccCCC-CCCccCCCeeecCCcchhhhcCC---------C--
Q 018503           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRS-KAELIFPG-KKTRFFPGVMIAEEPQWRDCIQG---------S--  117 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~-~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~~---------~--  117 (355)
                      |+|+||||+|+||++++++|+++|++|++++|+.. ........ ........+|+.+.+++.++++.         .  
T Consensus         2 k~vlItGasggiG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~   81 (251)
T PRK06924          2 RYVIITGTSQGLGEAIANQLLEKGTHVISISRTENKELTKLAEQYNSNLTFHSLDLQDVHELETNFNEILSSIQEDNVSS   81 (251)
T ss_pred             cEEEEecCCchHHHHHHHHHHhcCCEEEEEeCCchHHHHHHHhccCCceEEEEecCCCHHHHHHHHHHHHHhcCcccCCc
Confidence            58999999999999999999999999999999873 22211111 00011345788888888766642         1  


Q ss_pred             cEEEECCCCCCC----CCCChhhHHHHHHHhhhhHHHHHHHHHcC--CC-CCCcEEEEeeeeeeeeCCCCCccccCCCCC
Q 018503          118 TAVVNLAGTPIG----TRWSSEIKKEIKESRIRVTSKVVDLINES--PE-GVRPSVLVSATALGYYGTSETEVFDESSPS  190 (355)
Q Consensus       118 d~vi~~a~~~~~----~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~-~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~  190 (355)
                      +++||++|....    ...+.+.....+++|+.+...+++++...  .. +.+++|++||...  +.         ..+.
T Consensus        82 ~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~--~~---------~~~~  150 (251)
T PRK06924         82 IHLINNAGMVAPIKPIEKAESEELITNVHLNLLAPMILTSTFMKHTKDWKVDKRVINISSGAA--KN---------PYFG  150 (251)
T ss_pred             eEEEEcceecccCcccccCCHHHHHHHhccceehHHHHHHHHHHHHhccCCCceEEEecchhh--cC---------CCCC
Confidence            278999986422    23455667788889999866666554331  12 3468999998654  21         1223


Q ss_pred             CChh-HHHHHHHHHHHHhcc-----CCCCeEEEEEecEEEeCCCCcc----cchHHHHHHHhCCCCCCCCcceecccHHH
Q 018503          191 GNDY-LAEVCREWEGTALKV-----NKDVRLALIRIGIVLGKDGGAL----AKMIPLFMMFAGGPLGSGQQWFSWIHLDD  260 (355)
Q Consensus       191 ~~~y-~~k~~~~~~~~~~~~-----~~~~~~~i~Rp~~i~G~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~i~v~D  260 (355)
                      ...| .+|...+.+...+..     ..++++..++||.+-.+.....    ............. ..    ...+...+|
T Consensus       151 ~~~Y~~sKaa~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~-~~----~~~~~~~~d  225 (251)
T PRK06924        151 WSAYCSSKAGLDMFTQTVATEQEEEEYPVKIVAFSPGVMDTNMQAQIRSSSKEDFTNLDRFITL-KE----EGKLLSPEY  225 (251)
T ss_pred             cHHHhHHHHHHHHHHHHHHHHhhhcCCCeEEEEecCCccccHhHHHHHhcCcccchHHHHHHHH-hh----cCCcCCHHH
Confidence            4567 777766666554432     3479999999998865431100    0000000000000 00    112688999


Q ss_pred             HHHHHHHHHhC
Q 018503          261 IVNLIYEALSN  271 (355)
Q Consensus       261 va~~~~~~~~~  271 (355)
                      +|+.++.++..
T Consensus       226 va~~~~~l~~~  236 (251)
T PRK06924        226 VAKALRNLLET  236 (251)
T ss_pred             HHHHHHHHHhc
Confidence            99999999986

>PRK06125 short chain dehydrogenase; Provisional

Probab=99.56  E-value=3.4e-13  Score=116.95  Aligned_cols=218  Identities=16%  Similarity=0.052  Sum_probs=136.8

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCC----C-CCCccCCCeeecCCcchhhhcC---CCcEEE
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP----G-KKTRFFPGVMIAEEPQWRDCIQ---GSTAVV  121 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~-~~~~~~~~~d~~~~~~~~~~~~---~~d~vi  121 (355)
                      .++++||||+|.+|+++++.|++.|++|++++|+.+.......    . ........+|+.|++++.++++   .+|++|
T Consensus         7 ~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~id~lv   86 (259)
T PRK06125          7 GKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAHGVDVAVHALDLSSPEAREQLAAEAGDIDILV   86 (259)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHhCCCCEEE
Confidence            4799999999999999999999999999999998765433211    0 0001133578888888776653   689999


Q ss_pred             ECCCCCCC---CCCChhhHHHHHHHhhhhHHHHHHHHHcC--CCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCChh-H
Q 018503          122 NLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-L  195 (355)
Q Consensus       122 ~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~~y-~  195 (355)
                      |++|....   .....+.+...+++|+.+...+++++...  ..+..++|++||...  ..     +    .+....| .
T Consensus        87 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~--~~-----~----~~~~~~y~a  155 (259)
T PRK06125         87 NNAGAIPGGGLDDVDDAAWRAGWELKVFGYIDLTRLAYPRMKARGSGVIVNVIGAAG--EN-----P----DADYICGSA  155 (259)
T ss_pred             ECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEecCccc--cC-----C----CCCchHhHH
Confidence            99996422   23455667888999999988888766321  133457888887643  11     0    1122345 5


Q ss_pred             HHHHHHHHHHHhcc---CCCCeEEEEEecEEEeCCCCcccc------h--HHHH-HHHhCCCCCCCCcceecccHHHHHH
Q 018503          196 AEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALAK------M--IPLF-MMFAGGPLGSGQQWFSWIHLDDIVN  263 (355)
Q Consensus       196 ~k~~~~~~~~~~~~---~~~~~~~i~Rp~~i~G~~~~~~~~------~--~~~~-~~~~~~~~~~~~~~~~~i~v~Dva~  263 (355)
                      +|...+.+.+.+..   ..|++++.+.||.+..+.......      +  .... ......+      ...+...+|+|+
T Consensus       156 sk~al~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~va~  229 (259)
T PRK06125        156 GNAALMAFTRALGGKSLDDGVRVVGVNPGPVATDRMLTLLKGRARAELGDESRWQELLAGLP------LGRPATPEEVAD  229 (259)
T ss_pred             HHHHHHHHHHHHHHHhCccCeEEEEEecCccccHHHHHHHHhhhhcccCCHHHHHHHhccCC------cCCCcCHHHHHH
Confidence            66555554444322   358999999999987653110000      0  0000 0001111      123678999999


Q ss_pred             HHHHHHhCCC---CCCceEecCCC
Q 018503          264 LIYEALSNPS---YRGVINGTAPN  284 (355)
Q Consensus       264 ~~~~~~~~~~---~~~~~~i~~~~  284 (355)
                      +++.++....   .+..+.+.+|.
T Consensus       230 ~~~~l~~~~~~~~~G~~i~vdgg~  253 (259)
T PRK06125        230 LVAFLASPRSGYTSGTVVTVDGGI  253 (259)
T ss_pred             HHHHHcCchhccccCceEEecCCe
Confidence            9999987543   23356666553

>PRK07370 enoyl-(acyl carrier protein) reductase; Validated

Probab=99.55  E-value=1.9e-13  Score=118.45  Aligned_cols=218  Identities=14%  Similarity=0.060  Sum_probs=136.7

Q ss_pred             CCCEEEEEcCC--chHHHHHHHHHHhCCCeEEEEecCCch------hhccCCCCCCccCCCeeecCCcchhhhcC-----
Q 018503           49 SQMTVSVTGAT--GFIGRRLVQRLQADNHQVRVLTRSRSK------AELIFPGKKTRFFPGVMIAEEPQWRDCIQ-----  115 (355)
Q Consensus        49 ~~~~IlVtGat--G~iG~~l~~~L~~~g~~V~~~~r~~~~------~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-----  115 (355)
                      +.++++||||+  +.||++++++|++.|++|++..|+.+.      ...+...........+|+.|++++.++++     
T Consensus         5 ~~k~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~   84 (258)
T PRK07370          5 TGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTEPLNPSLFLPCDVQDDAQIEETFETIKQK   84 (258)
T ss_pred             CCcEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecCcccchHHHHHHHHHhccCcceEeecCcCCHHHHHHHHHHHHHH
Confidence            34689999986  799999999999999999888764331      11111111111144579999888876553     


Q ss_pred             --CCcEEEECCCCCCC-------CCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCCCCccccC
Q 018503          116 --GSTAVVNLAGTPIG-------TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDE  186 (355)
Q Consensus       116 --~~d~vi~~a~~~~~-------~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e  186 (355)
                        .+|++|||||....       ...+.+.+...+++|+.++..+++++...-...+++|++||...  ...        
T Consensus        85 ~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~~g~Iv~isS~~~--~~~--------  154 (258)
T PRK07370         85 WGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSEGGSIVTLTYLGG--VRA--------  154 (258)
T ss_pred             cCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhhCCeEEEEecccc--ccC--------
Confidence              58999999996421       12345667888999999998888876542112368999998644  110        


Q ss_pred             CCCCCChh-HHHHHHHHHHHHhcc---CCCCeEEEEEecEEEeCCCCcccchHHHHH-HHhCCCCCCCCcceecccHHHH
Q 018503          187 SSPSGNDY-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALAKMIPLFM-MFAGGPLGSGQQWFSWIHLDDI  261 (355)
Q Consensus       187 ~~~~~~~y-~~k~~~~~~~~~~~~---~~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~v~Dv  261 (355)
                       .+....| .+|.....+.+.+..   ..|+++..+.||.+-.+............. .....+      ...+...+|+
T Consensus       155 -~~~~~~Y~asKaal~~l~~~la~el~~~gI~Vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p------~~r~~~~~dv  227 (258)
T PRK07370        155 -IPNYNVMGVAKAALEASVRYLAAELGPKNIRVNAISAGPIRTLASSAVGGILDMIHHVEEKAP------LRRTVTQTEV  227 (258)
T ss_pred             -CcccchhhHHHHHHHHHHHHHHHHhCcCCeEEEEEecCcccCchhhccccchhhhhhhhhcCC------cCcCCCHHHH
Confidence             1223457 777766665555443   348999999999987653211100000011 011111      1236778999


Q ss_pred             HHHHHHHHhCCC---CCCceEecCC
Q 018503          262 VNLIYEALSNPS---YRGVINGTAP  283 (355)
Q Consensus       262 a~~~~~~~~~~~---~~~~~~i~~~  283 (355)
                      +.++..++..+.   .+..+.+.++
T Consensus       228 a~~~~fl~s~~~~~~tG~~i~vdgg  252 (258)
T PRK07370        228 GNTAAFLLSDLASGITGQTIYVDAG  252 (258)
T ss_pred             HHHHHHHhChhhccccCcEEEECCc
Confidence            999999997543   2335555544

>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.55  E-value=7.8e-13  Score=117.42  Aligned_cols=213  Identities=16%  Similarity=-0.001  Sum_probs=132.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCch-hhcc----CCCCCCccCCCeeecCCcchhhhc------CCC
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSK-AELI----FPGKKTRFFPGVMIAEEPQWRDCI------QGS  117 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~-~~~~----~~~~~~~~~~~~d~~~~~~~~~~~------~~~  117 (355)
                      +.++++||||+|+||++++++|+++|++|++.+++... ....    ...........+|+.|.+.+.+++      ..+
T Consensus        11 ~~k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~d~~~~~~~~~~~~~~g~i   90 (306)
T PRK07792         11 SGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRAAGAKAVAVAGDISQRATADELVATAVGLGGL   90 (306)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCchhHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHhCCC
Confidence            45799999999999999999999999999999875432 1111    111111113456888887776655      368


Q ss_pred             cEEEECCCCCCCC---CCChhhHHHHHHHhhhhHHHHHHHHHcC-C-----C---CCCcEEEEeeeeeeeeCCCCCcccc
Q 018503          118 TAVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES-P-----E---GVRPSVLVSATALGYYGTSETEVFD  185 (355)
Q Consensus       118 d~vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~-----~---~~~~~v~~Ss~~~~~yg~~~~~~~~  185 (355)
                      |++||+||.....   ....+.+...+++|+.++..+++++... .     .   ...++|++||...  +..       
T Consensus        91 D~li~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~--~~~-------  161 (306)
T PRK07792         91 DIVVNNAGITRDRMLFNMSDEEWDAVIAVHLRGHFLLTRNAAAYWRAKAKAAGGPVYGRIVNTSSEAG--LVG-------  161 (306)
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcccCCCCCcEEEEECCccc--ccC-------
Confidence            9999999975331   2345667788999999999998876421 0     0   1247999998765  221       


Q ss_pred             CCCCCCChh-HHHHHHHHHHHHhcc---CCCCeEEEEEecEEEeCCCCcccchHHHHHHHhCCCCCCCCcceecccHHHH
Q 018503          186 ESSPSGNDY-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDI  261 (355)
Q Consensus       186 e~~~~~~~y-~~k~~~~~~~~~~~~---~~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dv  261 (355)
                        .+....| .+|...+.+...+..   .+|+++..+.|+.  .....  .......   . ...   ......+..+|+
T Consensus       162 --~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~i~Pg~--~t~~~--~~~~~~~---~-~~~---~~~~~~~~pe~v  228 (306)
T PRK07792        162 --PVGQANYGAAKAGITALTLSAARALGRYGVRANAICPRA--RTAMT--ADVFGDA---P-DVE---AGGIDPLSPEHV  228 (306)
T ss_pred             --CCCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEECCCC--CCchh--hhhcccc---c-hhh---hhccCCCCHHHH
Confidence              1223457 777776666554444   3588988888872  11100  0000000   0 000   011234689999


Q ss_pred             HHHHHHHHhCCC---CCCceEecCC
Q 018503          262 VNLIYEALSNPS---YRGVINGTAP  283 (355)
Q Consensus       262 a~~~~~~~~~~~---~~~~~~i~~~  283 (355)
                      |.++..++....   .+.+|.+.++
T Consensus       229 a~~v~~L~s~~~~~~tG~~~~v~gg  253 (306)
T PRK07792        229 VPLVQFLASPAAAEVNGQVFIVYGP  253 (306)
T ss_pred             HHHHHHHcCccccCCCCCEEEEcCC
Confidence            999999887532   3335555544

>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.55  E-value=3.7e-13  Score=116.47  Aligned_cols=218  Identities=10%  Similarity=-0.007  Sum_probs=135.7

Q ss_pred             CCCEEEEEcCC--chHHHHHHHHHHhCCCeEEEEecCCch---hhccCCC--CCCccCCCeeecCCcchhhhc-------
Q 018503           49 SQMTVSVTGAT--GFIGRRLVQRLQADNHQVRVLTRSRSK---AELIFPG--KKTRFFPGVMIAEEPQWRDCI-------  114 (355)
Q Consensus        49 ~~~~IlVtGat--G~iG~~l~~~L~~~g~~V~~~~r~~~~---~~~~~~~--~~~~~~~~~d~~~~~~~~~~~-------  114 (355)
                      ..++++||||+  +.||.+++++|+++|++|++++|+...   ...+...  ........+|+.|++++.+++       
T Consensus         6 ~~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~   85 (257)
T PRK08594          6 EGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERLEKEVRELADTLEGQESLLLPCDVTSDEEITACFETIKEEV   85 (257)
T ss_pred             CCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcccchHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHHHHHhC
Confidence            34789999997  899999999999999999998875321   1111110  111113457999988776655       


Q ss_pred             CCCcEEEECCCCCCC-------CCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCCCCccccCC
Q 018503          115 QGSTAVVNLAGTPIG-------TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDES  187 (355)
Q Consensus       115 ~~~d~vi~~a~~~~~-------~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~  187 (355)
                      ..+|++|||||....       .+.+.+.+...+++|+.+...+++++...-....++|++||.... .+          
T Consensus        86 g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~-~~----------  154 (257)
T PRK08594         86 GVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTEGGSIVTLTYLGGE-RV----------  154 (257)
T ss_pred             CCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhcccCceEEEEcccCCc-cC----------
Confidence            358999999986421       123445566778899999888877765421123589999986541 11          


Q ss_pred             CCCCChh-HHHHHHHHHHHHhcc---CCCCeEEEEEecEEEeCCCCcccchHHHHHH-HhCCCCCCCCcceecccHHHHH
Q 018503          188 SPSGNDY-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALAKMIPLFMM-FAGGPLGSGQQWFSWIHLDDIV  262 (355)
Q Consensus       188 ~~~~~~y-~~k~~~~~~~~~~~~---~~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~v~Dva  262 (355)
                      .+....| .+|.....+.+.+..   ..|+++..+.||.+..+.............. ....+      ...+...+|+|
T Consensus       155 ~~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p------~~r~~~p~~va  228 (257)
T PRK08594        155 VQNYNVMGVAKASLEASVKYLANDLGKDGIRVNAISAGPIRTLSAKGVGGFNSILKEIEERAP------LRRTTTQEEVG  228 (257)
T ss_pred             CCCCchhHHHHHHHHHHHHHHHHHhhhcCCEEeeeecCcccCHhHhhhccccHHHHHHhhcCC------ccccCCHHHHH
Confidence            1223467 777766666554443   3489999999998876521110000000110 11111      12357889999


Q ss_pred             HHHHHHHhCCC--CCC-ceEecCC
Q 018503          263 NLIYEALSNPS--YRG-VINGTAP  283 (355)
Q Consensus       263 ~~~~~~~~~~~--~~~-~~~i~~~  283 (355)
                      ++++.++....  ..| .+.+.+|
T Consensus       229 ~~~~~l~s~~~~~~tG~~~~~dgg  252 (257)
T PRK08594        229 DTAAFLFSDLSRGVTGENIHVDSG  252 (257)
T ss_pred             HHHHHHcCcccccccceEEEECCc
Confidence            99999997643  233 5555444

>PRK05854 short chain dehydrogenase; Provisional

Probab=99.54  E-value=9.5e-14  Score=123.62  Aligned_cols=177  Identities=15%  Similarity=0.064  Sum_probs=118.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCC----C--CCCccCCCeeecCCcchhhhcC-------
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP----G--KKTRFFPGVMIAEEPQWRDCIQ-------  115 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~--~~~~~~~~~d~~~~~~~~~~~~-------  115 (355)
                      ++++++||||+|.||.+++++|++.|++|++++|+.++......    .  .....+..+|+.|.+++.++++       
T Consensus        13 ~gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~~~~~~   92 (313)
T PRK05854         13 SGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAALGEQLRAEGR   92 (313)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHHHHHHhCC
Confidence            35799999999999999999999999999999998765432211    0  0011134578888887776553       


Q ss_pred             CCcEEEECCCCCCCC--CCChhhHHHHHHHhhhhHHHHHHHHHcC-CCCCCcEEEEeeeeeeeeCCCCCccccCCC--CC
Q 018503          116 GSTAVVNLAGTPIGT--RWSSEIKKEIKESRIRVTSKVVDLINES-PEGVRPSVLVSATALGYYGTSETEVFDESS--PS  190 (355)
Q Consensus       116 ~~d~vi~~a~~~~~~--~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~--~~  190 (355)
                      .+|++||+||.....  ....+..+..+++|+.+...+.+.+... ..+..++|++||.... ++........+..  +.
T Consensus        93 ~iD~li~nAG~~~~~~~~~t~~~~e~~~~vN~~g~~~l~~~llp~l~~~~~riv~vsS~~~~-~~~~~~~~~~~~~~~~~  171 (313)
T PRK05854         93 PIHLLINNAGVMTPPERQTTADGFELQFGTNHLGHFALTAHLLPLLRAGRARVTSQSSIAAR-RGAINWDDLNWERSYAG  171 (313)
T ss_pred             CccEEEECCccccCCccccCcccHHHHhhhhhHHHHHHHHHHHHHHHhCCCCeEEEechhhc-CCCcCcccccccccCcc
Confidence            489999999975321  2345667788999999977776665421 1234689999997652 3321111122222  23


Q ss_pred             CChh-HHHHHHHHHHHHhcc-----CCCCeEEEEEecEEEeC
Q 018503          191 GNDY-LAEVCREWEGTALKV-----NKDVRLALIRIGIVLGK  226 (355)
Q Consensus       191 ~~~y-~~k~~~~~~~~~~~~-----~~~~~~~i~Rp~~i~G~  226 (355)
                      ...| .+|.....+...+..     ..++.+..+.||.+..+
T Consensus       172 ~~~Y~~SK~a~~~~~~~la~~~~~~~~gI~v~~v~PG~v~T~  213 (313)
T PRK05854        172 MRAYSQSKIAVGLFALELDRRSRAAGWGITSNLAHPGVAPTN  213 (313)
T ss_pred             hhhhHHHHHHHHHHHHHHHHHhhcCCCCeEEEEEecceeccC
Confidence            3467 778776666654432     34799999999998654

>PRK08177 short chain dehydrogenase; Provisional

Probab=99.54  E-value=1.2e-13  Score=117.18  Aligned_cols=168  Identities=13%  Similarity=0.065  Sum_probs=114.8

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcC-----CCcEEEECCC
Q 018503           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ-----GSTAVVNLAG  125 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-----~~d~vi~~a~  125 (355)
                      ++|+||||+|++|++++++|+++|++|++++|++........... .....+|+.|.+++.++++     ++|+|||+||
T Consensus         2 k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~D~~d~~~~~~~~~~~~~~~id~vi~~ag   80 (225)
T PRK08177          2 RTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQDTALQALPG-VHIEKLDMNDPASLDQLLQRLQGQRFDLLFVNAG   80 (225)
T ss_pred             CEEEEeCCCchHHHHHHHHHHhCCCEEEEEeCCCcchHHHHhccc-cceEEcCCCCHHHHHHHHHHhhcCCCCEEEEcCc
Confidence            589999999999999999999999999999998765433221111 1134578888887766664     5899999998


Q ss_pred             CCCC-----CCCChhhHHHHHHHhhhhHHHHHHHHHcC-CCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCChh-HHHH
Q 018503          126 TPIG-----TRWSSEIKKEIKESRIRVTSKVVDLINES-PEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-LAEV  198 (355)
Q Consensus       126 ~~~~-----~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~~y-~~k~  198 (355)
                      ....     .....+.....+.+|+.++..+.+++... ..+...++++||.    +|....    ......+.| .+|.
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~iv~~ss~----~g~~~~----~~~~~~~~Y~~sK~  152 (225)
T PRK08177         81 ISGPAHQSAADATAAEIGQLFLTNAIAPIRLARRLLGQVRPGQGVLAFMSSQ----LGSVEL----PDGGEMPLYKASKA  152 (225)
T ss_pred             ccCCCCCCcccCCHHHHhhheeeeeeHHHHHHHHHHHhhhhcCCEEEEEccC----cccccc----CCCCCccchHHHHH
Confidence            7422     12234556778889999999998877542 1233567777764    322111    111123457 7777


Q ss_pred             HHHHHHHHhccC---CCCeEEEEEecEEEeCC
Q 018503          199 CREWEGTALKVN---KDVRLALIRIGIVLGKD  227 (355)
Q Consensus       199 ~~~~~~~~~~~~---~~~~~~i~Rp~~i~G~~  227 (355)
                      ..+.+...+..+   .++.+..++||.+-.+.
T Consensus       153 a~~~~~~~l~~e~~~~~i~v~~i~PG~i~t~~  184 (225)
T PRK08177        153 ALNSMTRSFVAELGEPTLTVLSMHPGWVKTDM  184 (225)
T ss_pred             HHHHHHHHHHHHhhcCCeEEEEEcCCceecCC
Confidence            777666655432   47999999999987664

>PRK07791 short chain dehydrogenase; Provisional

Probab=99.53  E-value=4.4e-13  Score=117.85  Aligned_cols=215  Identities=20%  Similarity=0.105  Sum_probs=134.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCC---------chhhcc----CCCCCCccCCCeeecCCcchhhhc-
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSR---------SKAELI----FPGKKTRFFPGVMIAEEPQWRDCI-  114 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~---------~~~~~~----~~~~~~~~~~~~d~~~~~~~~~~~-  114 (355)
                      +.++++||||++.||+++++.|++.|++|++++|+.         +.....    ...........+|+.|.+++.+++ 
T Consensus         5 ~~k~~lITGas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~   84 (286)
T PRK07791          5 DGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDIADWDGAANLVD   84 (286)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHHHhcCCceEEEeCCCCCHHHHHHHHH
Confidence            457899999999999999999999999999988765         221111    111111113457888888776555 


Q ss_pred             ------CCCcEEEECCCCCCC---CCCChhhHHHHHHHhhhhHHHHHHHHHcC-C-C---C---CCcEEEEeeeeeeeeC
Q 018503          115 ------QGSTAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES-P-E---G---VRPSVLVSATALGYYG  177 (355)
Q Consensus       115 ------~~~d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~-~---~---~~~~v~~Ss~~~~~yg  177 (355)
                            ..+|++|||||....   .....+.+...+++|+.++..+++++... . .   +   ..++|++||.... ++
T Consensus        85 ~~~~~~g~id~lv~nAG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~-~~  163 (286)
T PRK07791         85 AAVETFGGLDVLVNNAGILRDRMIANMSEEEWDAVIAVHLKGHFATLRHAAAYWRAESKAGRAVDARIINTSSGAGL-QG  163 (286)
T ss_pred             HHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccCCCCCcEEEEeCchhhC-cC
Confidence                  367999999997432   23455677889999999988887766421 0 1   1   2579999986541 22


Q ss_pred             CCCCccccCCCCCCChh-HHHHHHHHHHHHhccC---CCCeEEEEEecEEEeCCCCcccchHHHHHHHhCCCCCCCCcce
Q 018503          178 TSETEVFDESSPSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWF  253 (355)
Q Consensus       178 ~~~~~~~~e~~~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~  253 (355)
                                .+....| .+|...+.+...+..+   .|+++..+.|+ +..+..   .....  ......+    ....
T Consensus       164 ----------~~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~Pg-~~T~~~---~~~~~--~~~~~~~----~~~~  223 (286)
T PRK07791        164 ----------SVGQGNYSAAKAGIAALTLVAAAELGRYGVTVNAIAPA-ARTRMT---ETVFA--EMMAKPE----EGEF  223 (286)
T ss_pred             ----------CCCchhhHHHHHHHHHHHHHHHHHHHHhCeEEEEECCC-CCCCcc---hhhHH--HHHhcCc----cccc
Confidence                      1223457 7776665555544332   58999999997 422211   11111  1111111    1112


Q ss_pred             ecccHHHHHHHHHHHHhCCC--CCC-ceEecCCC
Q 018503          254 SWIHLDDIVNLIYEALSNPS--YRG-VINGTAPN  284 (355)
Q Consensus       254 ~~i~v~Dva~~~~~~~~~~~--~~~-~~~i~~~~  284 (355)
                      .+...+|+|++++.++....  ..| .+.+.+|.
T Consensus       224 ~~~~pedva~~~~~L~s~~~~~itG~~i~vdgG~  257 (286)
T PRK07791        224 DAMAPENVSPLVVWLGSAESRDVTGKVFEVEGGK  257 (286)
T ss_pred             CCCCHHHHHHHHHHHhCchhcCCCCcEEEEcCCc
Confidence            35679999999999987533  344 55555554

>PRK07201 short chain dehydrogenase; Provisional

Probab=99.53  E-value=1.5e-13  Score=135.11  Aligned_cols=197  Identities=12%  Similarity=0.087  Sum_probs=135.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCC----CCCCccCCCeeecCCcchhhhcC-------CC
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP----GKKTRFFPGVMIAEEPQWRDCIQ-------GS  117 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~~d~~~~~~~~~~~~-------~~  117 (355)
                      .+++++||||+|+||++++++|+++|++|++++|+.+.......    .........+|+.|.+++.++++       ++
T Consensus       370 ~~k~vlItGas~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~i  449 (657)
T PRK07201        370 VGKVVLITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEIRAKGGTAHAYTCDLTDSAAVDHTVKDILAEHGHV  449 (657)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcCCC
Confidence            45789999999999999999999999999999998765433211    01111133578888888776664       68


Q ss_pred             cEEEECCCCCCCCCC-----ChhhHHHHHHHhhhhHHHHHHHHHcC--CCCCCcEEEEeeeeeeeeCCCCCccccCCCCC
Q 018503          118 TAVVNLAGTPIGTRW-----SSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPS  190 (355)
Q Consensus       118 d~vi~~a~~~~~~~~-----~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~  190 (355)
                      |++||+||.......     ..+.....+++|+.++..+++++...  ..+.+++|++||.+.  |+..         +.
T Consensus       450 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~--~~~~---------~~  518 (657)
T PRK07201        450 DYLVNNAGRSIRRSVENSTDRFHDYERTMAVNYFGAVRLILGLLPHMRERRFGHVVNVSSIGV--QTNA---------PR  518 (657)
T ss_pred             CEEEECCCCCCCCChhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEECChhh--cCCC---------CC
Confidence            999999996422111     13456788899999988887665321  145678999999876  5421         22


Q ss_pred             CChh-HHHHHHHHHHHHhccC---CCCeEEEEEecEEEeCCCCcccchHHHHHHHhCCCCCCCCcceecccHHHHHHHHH
Q 018503          191 GNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIY  266 (355)
Q Consensus       191 ~~~y-~~k~~~~~~~~~~~~~---~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~  266 (355)
                      ...| .+|...+.....+..+   .+++++.++||.+..+.......            ..    ....+..+++|+.++
T Consensus       519 ~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~T~~~~~~~~------------~~----~~~~~~~~~~a~~i~  582 (657)
T PRK07201        519 FSAYVASKAALDAFSDVAASETLSDGITFTTIHMPLVRTPMIAPTKR------------YN----NVPTISPEEAADMVV  582 (657)
T ss_pred             cchHHHHHHHHHHHHHHHHHHHHhhCCcEEEEECCcCcccccCcccc------------cc----CCCCCCHHHHHHHHH
Confidence            4567 7777666665554432   48999999999998764221100            00    123578999999999


Q ss_pred             HHHhCC
Q 018503          267 EALSNP  272 (355)
Q Consensus       267 ~~~~~~  272 (355)
                      ..+...
T Consensus       583 ~~~~~~  588 (657)
T PRK07201        583 RAIVEK  588 (657)
T ss_pred             HHHHhC
Confidence            988754

>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.52  E-value=1.8e-12  Score=112.21  Aligned_cols=203  Identities=11%  Similarity=0.027  Sum_probs=127.8

Q ss_pred             CCCEEEEEcCCc--hHHHHHHHHHHhCCCeEEEEecCCc-----------hhhc----cCCCCCCccCCCeeecCCcchh
Q 018503           49 SQMTVSVTGATG--FIGRRLVQRLQADNHQVRVLTRSRS-----------KAEL----IFPGKKTRFFPGVMIAEEPQWR  111 (355)
Q Consensus        49 ~~~~IlVtGatG--~iG~~l~~~L~~~g~~V~~~~r~~~-----------~~~~----~~~~~~~~~~~~~d~~~~~~~~  111 (355)
                      ++++|+||||+|  .||++++++|+++|++|+++.|...           ....    ............+|+.|.+++.
T Consensus         5 ~~k~vlVtGas~~~giG~~~a~~l~~~G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~i~   84 (256)
T PRK12859          5 KNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLKNGVKVSSMELDLTQNDAPK   84 (256)
T ss_pred             CCcEEEEECCCCCCChHHHHHHHHHHCCCeEEEEecccccccccccccHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHH
Confidence            347899999995  8999999999999999998764311           0000    1111110113357888888776


Q ss_pred             hhcC-------CCcEEEECCCCCCC---CCCChhhHHHHHHHhhhhHHHHHHHHHcC--CCCCCcEEEEeeeeeeeeCCC
Q 018503          112 DCIQ-------GSTAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTS  179 (355)
Q Consensus       112 ~~~~-------~~d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~~~~v~~Ss~~~~~yg~~  179 (355)
                      +++.       .+|++||+||....   .....+.....+++|+.+...+..++...  ..+..++|++||...  ..  
T Consensus        85 ~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~--~~--  160 (256)
T PRK12859         85 ELLNKVTEQLGYPHILVNNAAYSTNNDFSNLTAEELDKHYMVNVRATTLLSSQFARGFDKKSGGRIINMTSGQF--QG--  160 (256)
T ss_pred             HHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeEEEEEccccc--CC--
Confidence            6553       47999999997432   23445667788999999988775444221  134568999999764  21  


Q ss_pred             CCccccCCCCCCChh-HHHHHHHHHHHHhcc---CCCCeEEEEEecEEEeCCCCcccchHHHHHHHhCCCCCCCCcceec
Q 018503          180 ETEVFDESSPSGNDY-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSW  255 (355)
Q Consensus       180 ~~~~~~e~~~~~~~y-~~k~~~~~~~~~~~~---~~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  255 (355)
                             ..+....| .+|...+.+.+.+..   ..+++++.++||.+-.+....  ....  ......++      ..+
T Consensus       161 -------~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~PG~i~t~~~~~--~~~~--~~~~~~~~------~~~  223 (256)
T PRK12859        161 -------PMVGELAYAATKGAIDALTSSLAAEVAHLGITVNAINPGPTDTGWMTE--EIKQ--GLLPMFPF------GRI  223 (256)
T ss_pred             -------CCCCchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEEccccCCCCCH--HHHH--HHHhcCCC------CCC
Confidence                   11234567 777766666554443   248999999999886653211  1111  11111111      124


Q ss_pred             ccHHHHHHHHHHHHhCC
Q 018503          256 IHLDDIVNLIYEALSNP  272 (355)
Q Consensus       256 i~v~Dva~~~~~~~~~~  272 (355)
                      ...+|+|+++..++...
T Consensus       224 ~~~~d~a~~~~~l~s~~  240 (256)
T PRK12859        224 GEPKDAARLIKFLASEE  240 (256)
T ss_pred             cCHHHHHHHHHHHhCcc
Confidence            67899999999998764

>PRK09009 C factor cell-cell signaling protein; Provisional

Probab=99.52  E-value=1.9e-12  Score=110.52  Aligned_cols=196  Identities=10%  Similarity=0.071  Sum_probs=124.6

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhCC--CeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhh---cCCCcEEEECCC
Q 018503           51 MTVSVTGATGFIGRRLVQRLQADN--HQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDC---IQGSTAVVNLAG  125 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~---~~~~d~vi~~a~  125 (355)
                      |+|+||||+|+||++++++|+++|  +.|....|+...... ...   .....+|+.+.+++.++   +.++|++||+||
T Consensus         1 ~~vlItGas~gIG~~ia~~l~~~~~~~~v~~~~~~~~~~~~-~~~---~~~~~~Dls~~~~~~~~~~~~~~id~li~~aG   76 (235)
T PRK09009          1 MNILIVGGSGGIGKAMVKQLLERYPDATVHATYRHHKPDFQ-HDN---VQWHALDVTDEAEIKQLSEQFTQLDWLINCVG   76 (235)
T ss_pred             CEEEEECCCChHHHHHHHHHHHhCCCCEEEEEccCCccccc-cCc---eEEEEecCCCHHHHHHHHHhcCCCCEEEECCc
Confidence            589999999999999999999985  667666675533210 011   11345788888776654   357899999999


Q ss_pred             CCCCC---------CCChhhHHHHHHHhhhhHHHHHHHHHcC--CCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCChh
Q 018503          126 TPIGT---------RWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY  194 (355)
Q Consensus       126 ~~~~~---------~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~~y  194 (355)
                      .....         ....+.....+++|+.+...+++.+...  ..+..+++++||.... ..   .    ...+....|
T Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~~~i~~iss~~~~-~~---~----~~~~~~~~Y  148 (235)
T PRK09009         77 MLHTQDKGPEKSLQALDADFFLQNITLNTLPSLLLAKHFTPKLKQSESAKFAVISAKVGS-IS---D----NRLGGWYSY  148 (235)
T ss_pred             cccccccCcccccccCCHHHHHHHHHHHhHHHHHHHHHHHhhccccCCceEEEEeecccc-cc---c----CCCCCcchh
Confidence            75321         1123445677889999988777766542  1234578888874221 11   1    111223456


Q ss_pred             -HHHHHHHHHHHHhccC-----CCCeEEEEEecEEEeCCCCcccchHHHHHHHhCCCCCCCCcceecccHHHHHHHHHHH
Q 018503          195 -LAEVCREWEGTALKVN-----KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEA  268 (355)
Q Consensus       195 -~~k~~~~~~~~~~~~~-----~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~  268 (355)
                       .+|...+.+.+.+..+     .++.+..+.||.+..+.....   .      ...+      ...++..+|+|++++.+
T Consensus       149 ~asK~a~~~~~~~la~e~~~~~~~i~v~~v~PG~v~t~~~~~~---~------~~~~------~~~~~~~~~~a~~~~~l  213 (235)
T PRK09009        149 RASKAALNMFLKTLSIEWQRSLKHGVVLALHPGTTDTALSKPF---Q------QNVP------KGKLFTPEYVAQCLLGI  213 (235)
T ss_pred             hhhHHHHHHHHHHHHHHhhcccCCeEEEEEcccceecCCCcch---h------hccc------cCCCCCHHHHHHHHHHH
Confidence             6676655555444322     478899999999877643211   0      1111      12357899999999999


Q ss_pred             HhCCC
Q 018503          269 LSNPS  273 (355)
Q Consensus       269 ~~~~~  273 (355)
                      +....
T Consensus       214 ~~~~~  218 (235)
T PRK09009        214 IANAT  218 (235)
T ss_pred             HHcCC
Confidence            98764

>TIGR02685 pter_reduc_Leis pteridine reductase

Probab=99.52  E-value=8.8e-13  Score=114.90  Aligned_cols=215  Identities=14%  Similarity=0.056  Sum_probs=130.3

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCC-chhhccC----CC-CCCccCCCeeecCCcch----hhhc------
Q 018503           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSR-SKAELIF----PG-KKTRFFPGVMIAEEPQW----RDCI------  114 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~-~~~~~~~----~~-~~~~~~~~~d~~~~~~~----~~~~------  114 (355)
                      ..++||||+|+||++++++|+++|++|+++.|.. +......    .. ........+|+.|.+.+    .+++      
T Consensus         2 ~~~lITGas~gIG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~~~~   81 (267)
T TIGR02685         2 PAAVVTGAAKRIGSSIAVALHQEGYRVVLHYHRSAAAASTLAAELNARRPNSAVTCQADLSNSATLFSRCEAIIDACFRA   81 (267)
T ss_pred             CEEEEeCCCCcHHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHHHhccCCceEEEEccCCCchhhHHHHHHHHHHHHHc
Confidence            4699999999999999999999999999987653 2222111    00 00011234788888644    2222      


Q ss_pred             -CCCcEEEECCCCCCCCCC---Ch-----------hhHHHHHHHhhhhHHHHHHHHHcCC--C------CCCcEEEEeee
Q 018503          115 -QGSTAVVNLAGTPIGTRW---SS-----------EIKKEIKESRIRVTSKVVDLINESP--E------GVRPSVLVSAT  171 (355)
Q Consensus       115 -~~~d~vi~~a~~~~~~~~---~~-----------~~~~~~~~~n~~~~~~l~~a~~~~~--~------~~~~~v~~Ss~  171 (355)
                       .++|+||||||.......   ..           ......+++|+.++..+++++....  .      ....++++||.
T Consensus        82 ~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~~s~  161 (267)
T TIGR02685        82 FGRCDVLVNNASAFYPTPLLRGDAGEGVGDKKSLEVQVAELFGSNAIAPYFLIKAFAQRQAGTRAEQRSTNLSIVNLCDA  161 (267)
T ss_pred             cCCceEEEECCccCCCCcccccccccccccchhhHHHHHHHHHhhhHHHHHHHHHHHHHhhhcccccCCCCeEEEEehhh
Confidence             368999999996422111   11           1355778999999988887654310  1      12356666664


Q ss_pred             eeeeeCCCCCccccCCCCCCChh-HHHHHHHHHHHHhccC---CCCeEEEEEecEEEeCCCCcccchHHHHHHHhCCCCC
Q 018503          172 ALGYYGTSETEVFDESSPSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLG  247 (355)
Q Consensus       172 ~~~~yg~~~~~~~~e~~~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~~~~~~~  247 (355)
                      ..  ..         ..+....| .+|...+.+.+.+..+   .|++++.++||.+..+..... ....  ......+++
T Consensus       162 ~~--~~---------~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~~~~~~~~~~-~~~~--~~~~~~~~~  227 (267)
T TIGR02685       162 MT--DQ---------PLLGFTMYTMAKHALEGLTRSAALELAPLQIRVNGVAPGLSLLPDAMPF-EVQE--DYRRKVPLG  227 (267)
T ss_pred             hc--cC---------CCcccchhHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCccCccccch-hHHH--HHHHhCCCC
Confidence            33  11         12334568 7887777666655443   589999999999865532110 1111  111111111


Q ss_pred             CCCcceecccHHHHHHHHHHHHhCCC---CCCceEecCCC
Q 018503          248 SGQQWFSWIHLDDIVNLIYEALSNPS---YRGVINGTAPN  284 (355)
Q Consensus       248 ~~~~~~~~i~v~Dva~~~~~~~~~~~---~~~~~~i~~~~  284 (355)
                           ..+...+|++++++.++....   .+..+.+.++.
T Consensus       228 -----~~~~~~~~va~~~~~l~~~~~~~~~G~~~~v~gg~  262 (267)
T TIGR02685       228 -----QREASAEQIADVVIFLVSPKAKYITGTCIKVDGGL  262 (267)
T ss_pred             -----cCCCCHHHHHHHHHHHhCcccCCcccceEEECCce
Confidence                 125688999999999997643   23355665554

Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.

>PRK06940 short chain dehydrogenase; Provisional

Probab=99.52  E-value=9.3e-13  Score=115.16  Aligned_cols=223  Identities=17%  Similarity=0.090  Sum_probs=135.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccC----CCCCCccCCCeeecCCcchhhhcC------CCc
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIF----PGKKTRFFPGVMIAEEPQWRDCIQ------GST  118 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~~~~~~~~~~~d~~~~~~~~~~~~------~~d  118 (355)
                      |++.++|||| |+||++++++|. +|++|++++|+.++.....    ..........+|+.|.+++.++++      .+|
T Consensus         1 ~~k~~lItGa-~gIG~~la~~l~-~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~i~~~~~~~~~~g~id   78 (275)
T PRK06940          1 MKEVVVVIGA-GGIGQAIARRVG-AGKKVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSSRESVKALAATAQTLGPVT   78 (275)
T ss_pred             CCCEEEEECC-ChHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHhcCCCC
Confidence            3568899997 799999999996 7999999999875443221    111111134578989887776653      589


Q ss_pred             EEEECCCCCCCCCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCC-C--C-c---ccc------
Q 018503          119 AVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTS-E--T-E---VFD------  185 (355)
Q Consensus       119 ~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~-~--~-~---~~~------  185 (355)
                      ++||+||...    ....+...+++|+.++.++++++...-...+++|++||.... .... .  . .   ..+      
T Consensus        79 ~li~nAG~~~----~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~iv~isS~~~~-~~~~~~~~~~~~~~~~~~~~~~~  153 (275)
T PRK06940         79 GLVHTAGVSP----SQASPEAILKVDLYGTALVLEEFGKVIAPGGAGVVIASQSGH-RLPALTAEQERALATTPTEELLS  153 (275)
T ss_pred             EEEECCCcCC----chhhHHHHHHHhhHHHHHHHHHHHHHHhhCCCEEEEEecccc-cCcccchhhhccccccccccccc
Confidence            9999999642    235577899999999999998875520112457788876542 2110 0  0 0   000      


Q ss_pred             -----CCC--CCCChh-HHHHHHHHHHHHhcc---CCCCeEEEEEecEEEeCCCCc-ccchH-HHH-HHHhCCCCCCCCc
Q 018503          186 -----ESS--PSGNDY-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGA-LAKMI-PLF-MMFAGGPLGSGQQ  251 (355)
Q Consensus       186 -----e~~--~~~~~y-~~k~~~~~~~~~~~~---~~~~~~~i~Rp~~i~G~~~~~-~~~~~-~~~-~~~~~~~~~~~~~  251 (355)
                           +..  +....| .+|...+.....+..   ..|+++..+.||.+..+.... ..... ... ......++     
T Consensus       154 ~~~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gIrvn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~p~-----  228 (275)
T PRK06940        154 LPFLQPDAIEDSLHAYQIAKRANALRVMAEAVKWGERGARINSISPGIISTPLAQDELNGPRGDGYRNMFAKSPA-----  228 (275)
T ss_pred             cccccccccCCccchhHHHHHHHHHHHHHHHHHHccCCeEEEEeccCcCcCccchhhhcCCchHHHHHHhhhCCc-----
Confidence                 000  123467 777765555443322   358999999999987764211 10000 001 11111111     


Q ss_pred             ceecccHHHHHHHHHHHHhCCC---CCCceEecCCC
Q 018503          252 WFSWIHLDDIVNLIYEALSNPS---YRGVINGTAPN  284 (355)
Q Consensus       252 ~~~~i~v~Dva~~~~~~~~~~~---~~~~~~i~~~~  284 (355)
                       ..+...+|+|+++..++....   .+..+.+.+|.
T Consensus       229 -~r~~~peeia~~~~fL~s~~~~~itG~~i~vdgg~  263 (275)
T PRK06940        229 -GRPGTPDEIAALAEFLMGPRGSFITGSDFLVDGGA  263 (275)
T ss_pred             -ccCCCHHHHHHHHHHHcCcccCcccCceEEEcCCe
Confidence             236889999999999987543   33356665553

>PRK05855 short chain dehydrogenase; Validated

Probab=99.51  E-value=3.7e-13  Score=130.43  Aligned_cols=210  Identities=18%  Similarity=0.067  Sum_probs=136.4

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCC----CCCCccCCCeeecCCcchhhhcC-------C
Q 018503           48 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP----GKKTRFFPGVMIAEEPQWRDCIQ-------G  116 (355)
Q Consensus        48 ~~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~~d~~~~~~~~~~~~-------~  116 (355)
                      +..++++||||+|+||++++++|.++|++|++++|+.+.......    .........+|+.|++++.++++       .
T Consensus       313 ~~~~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~  392 (582)
T PRK05855        313 FSGKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRAAGAVAHAYRVDVSDADAMEAFAEWVRAEHGV  392 (582)
T ss_pred             CCCCEEEEECCcCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHhcCC
Confidence            345789999999999999999999999999999998765433211    01111134578999888776664       4


Q ss_pred             CcEEEECCCCCCC---CCCChhhHHHHHHHhhhhHHHHHHHHHcC--CCC-CCcEEEEeeeeeeeeCCCCCccccCCCCC
Q 018503          117 STAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEG-VRPSVLVSATALGYYGTSETEVFDESSPS  190 (355)
Q Consensus       117 ~d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~-~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~  190 (355)
                      +|++|||||....   .....+.....+++|+.++.++++++...  ..+ ..++|++||.+.  |...         +.
T Consensus       393 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~~sS~~~--~~~~---------~~  461 (582)
T PRK05855        393 PDIVVNNAGIGMAGGFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQMVERGTGGHIVNVASAAA--YAPS---------RS  461 (582)
T ss_pred             CcEEEECCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhh--ccCC---------CC
Confidence            8999999997532   22345667888999999998888765331  022 358999999876  5421         22


Q ss_pred             CChh-HHHHHHHHHHHHhcc---CCCCeEEEEEecEEEeCCCCcc--cchH----HHHHHHhCCCCCCCCcceecccHHH
Q 018503          191 GNDY-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGAL--AKMI----PLFMMFAGGPLGSGQQWFSWIHLDD  260 (355)
Q Consensus       191 ~~~y-~~k~~~~~~~~~~~~---~~~~~~~i~Rp~~i~G~~~~~~--~~~~----~~~~~~~~~~~~~~~~~~~~i~v~D  260 (355)
                      ...| .+|...+.+.+.+..   ..|++++.++||.+-.+.....  ....    ............     ......+|
T Consensus       462 ~~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~p~~  536 (582)
T PRK05855        462 LPAYATSKAAVLMLSECLRAELAAAGIGVTAICPGFVDTNIVATTRFAGADAEDEARRRGRADKLYQ-----RRGYGPEK  536 (582)
T ss_pred             CcHHHHHHHHHHHHHHHHHHHhcccCcEEEEEEeCCCcccchhccccCCcccchhhhHHhhhhhhcc-----ccCCCHHH
Confidence            4567 777766655554433   3589999999998865432110  0000    000000000000     11246799


Q ss_pred             HHHHHHHHHhCCC
Q 018503          261 IVNLIYEALSNPS  273 (355)
Q Consensus       261 va~~~~~~~~~~~  273 (355)
                      +|++++.++..+.
T Consensus       537 va~~~~~~~~~~~  549 (582)
T PRK05855        537 VAKAIVDAVKRNK  549 (582)
T ss_pred             HHHHHHHHHHcCC
Confidence            9999999998764

>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

Probab=99.51  E-value=2.2e-13  Score=118.41  Aligned_cols=218  Identities=16%  Similarity=0.066  Sum_probs=136.6

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCC-CCccCCCeeecCCcchhhhc-------CCCcEEE
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGK-KTRFFPGVMIAEEPQWRDCI-------QGSTAVV  121 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~-------~~~d~vi  121 (355)
                      +++++||||+|+||++++++|++.|++|++++|+.+....+.... .......+|+.+.+++.+++       ..+|++|
T Consensus         5 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li   84 (262)
T TIGR03325         5 GEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQELEAAHGDAVVGVEGDVRSLDDHKEAVARCVAAFGKIDCLI   84 (262)
T ss_pred             CcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhcCCceEEEEeccCCHHHHHHHHHHHHHHhCCCCEEE
Confidence            479999999999999999999999999999999876544332211 00112346888877666555       3679999


Q ss_pred             ECCCCCCC--C--CCCh----hhHHHHHHHhhhhHHHHHHHHHcC-CCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCC
Q 018503          122 NLAGTPIG--T--RWSS----EIKKEIKESRIRVTSKVVDLINES-PEGVRPSVLVSATALGYYGTSETEVFDESSPSGN  192 (355)
Q Consensus       122 ~~a~~~~~--~--~~~~----~~~~~~~~~n~~~~~~l~~a~~~~-~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~  192 (355)
                      |+||....  .  ....    +.+...+++|+.++..+++++... .....++|++||.... ++          .+...
T Consensus        85 ~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~~sS~~~~-~~----------~~~~~  153 (262)
T TIGR03325        85 PNAGIWDYSTALVDIPDDRIDEAFDEVFHINVKGYLLAVKAALPALVASRGSVIFTISNAGF-YP----------NGGGP  153 (262)
T ss_pred             ECCCCCccCCccccCCchhhhHHHHHhheeecHhHHHHHHHHHHHHhhcCCCEEEEecccee-cC----------CCCCc
Confidence            99986321  1  1111    245678899999999998887542 1123578888886551 22          11234


Q ss_pred             hh-HHHHHHHHHHHHhccCC--CCeEEEEEecEEEeCCCCccc-----ch---HHHHHHHhCCCCCCCCcceecccHHHH
Q 018503          193 DY-LAEVCREWEGTALKVNK--DVRLALIRIGIVLGKDGGALA-----KM---IPLFMMFAGGPLGSGQQWFSWIHLDDI  261 (355)
Q Consensus       193 ~y-~~k~~~~~~~~~~~~~~--~~~~~i~Rp~~i~G~~~~~~~-----~~---~~~~~~~~~~~~~~~~~~~~~i~v~Dv  261 (355)
                      .| .+|...+.+...+..+.  .+++..+.||.+..+......     ..   .+........     .....+...+|+
T Consensus       154 ~Y~~sKaa~~~l~~~la~e~~~~irvn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~p~~r~~~p~ev  228 (262)
T TIGR03325       154 LYTAAKHAVVGLVKELAFELAPYVRVNGVAPGGMSSDLRGPKSLGMADKSISTVPLGDMLKSV-----LPIGRMPDAEEY  228 (262)
T ss_pred             hhHHHHHHHHHHHHHHHHhhccCeEEEEEecCCCcCCCccccccccccccccccchhhhhhhc-----CCCCCCCChHHh
Confidence            57 77777766666555443  388999999998765321100     00   0000111100     011236778999


Q ss_pred             HHHHHHHHhCCC---CCC-ceEecCC
Q 018503          262 VNLIYEALSNPS---YRG-VINGTAP  283 (355)
Q Consensus       262 a~~~~~~~~~~~---~~~-~~~i~~~  283 (355)
                      |++++.++..+.   ..| ++.+.+|
T Consensus       229 a~~~~~l~s~~~~~~~tG~~i~vdgg  254 (262)
T TIGR03325       229 TGAYVFFATRGDTVPATGAVLNYDGG  254 (262)
T ss_pred             hhheeeeecCCCcccccceEEEecCC
Confidence            999999887532   233 5555554

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.

>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.50  E-value=3.6e-12  Score=110.23  Aligned_cols=218  Identities=14%  Similarity=0.046  Sum_probs=133.1

Q ss_pred             CCCEEEEEcC--CchHHHHHHHHHHhCCCeEEEEecCCc--hhhccCCC-CCCccCCCeeecCCcchhhhc-------CC
Q 018503           49 SQMTVSVTGA--TGFIGRRLVQRLQADNHQVRVLTRSRS--KAELIFPG-KKTRFFPGVMIAEEPQWRDCI-------QG  116 (355)
Q Consensus        49 ~~~~IlVtGa--tG~iG~~l~~~L~~~g~~V~~~~r~~~--~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~-------~~  116 (355)
                      ..++++||||  ++.||.+++++|++.|++|++++|+..  ........ ........+|+.|++++.+++       .+
T Consensus         6 ~~k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~   85 (256)
T PRK07889          6 EGKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGRALRLTERIAKRLPEPAPVLELDVTNEEHLASLADRVREHVDG   85 (256)
T ss_pred             cCCEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCccchhHHHHHHHhcCCCCcEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence            3468999999  899999999999999999999987642  11211111 001114457999888776655       35


Q ss_pred             CcEEEECCCCCCC-------CCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCCCCccccCCCC
Q 018503          117 STAVVNLAGTPIG-------TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSP  189 (355)
Q Consensus       117 ~d~vi~~a~~~~~-------~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~  189 (355)
                      +|++||+||....       ...+.+.....+++|+.++..+++++...-....++|++|+...  .+          .+
T Consensus        86 iD~li~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~g~Iv~is~~~~--~~----------~~  153 (256)
T PRK07889         86 LDGVVHSIGFAPQSALGGNFLDAPWEDVATALHVSAYSLKSLAKALLPLMNEGGSIVGLDFDAT--VA----------WP  153 (256)
T ss_pred             CcEEEEccccccccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhcccCceEEEEeeccc--cc----------CC
Confidence            8999999997421       12233455677899999988888776542112357888875322  11          12


Q ss_pred             CCChh-HHHHHHHHHHHHhcc---CCCCeEEEEEecEEEeCCCCcccchHHHHH-HHhCCCCCCCCcceecccHHHHHHH
Q 018503          190 SGNDY-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALAKMIPLFM-MFAGGPLGSGQQWFSWIHLDDIVNL  264 (355)
Q Consensus       190 ~~~~y-~~k~~~~~~~~~~~~---~~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~v~Dva~~  264 (355)
                      ....| .+|.....+.+.+..   ..|+++..+.||.+..+............. .....++     .+.+...+|+|++
T Consensus       154 ~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~-----~~~~~~p~evA~~  228 (256)
T PRK07889        154 AYDWMGVAKAALESTNRYLARDLGPRGIRVNLVAAGPIRTLAAKAIPGFELLEEGWDERAPL-----GWDVKDPTPVARA  228 (256)
T ss_pred             ccchhHHHHHHHHHHHHHHHHHhhhcCeEEEeeccCcccChhhhcccCcHHHHHHHHhcCcc-----ccccCCHHHHHHH
Confidence            23345 667665555444333   258999999999987653211110000001 1111111     1136789999999


Q ss_pred             HHHHHhCCC--CCC-ceEecCC
Q 018503          265 IYEALSNPS--YRG-VINGTAP  283 (355)
Q Consensus       265 ~~~~~~~~~--~~~-~~~i~~~  283 (355)
                      ++.++....  ..| ++.+.++
T Consensus       229 v~~l~s~~~~~~tG~~i~vdgg  250 (256)
T PRK07889        229 VVALLSDWFPATTGEIVHVDGG  250 (256)
T ss_pred             HHHHhCcccccccceEEEEcCc
Confidence            999998643  234 5555444

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.49  E-value=3e-12  Score=119.98  Aligned_cols=216  Identities=14%  Similarity=0.020  Sum_probs=134.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchh--hccCCCCCCccCCCeeecCCcchhhhcC-------CCcE
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKA--ELIFPGKKTRFFPGVMIAEEPQWRDCIQ-------GSTA  119 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~--~~~~~~~~~~~~~~~d~~~~~~~~~~~~-------~~d~  119 (355)
                      ..++++||||+|.||.++++.|.++|++|++++|+....  ........ .....+|+.|.+++.++++       ++|+
T Consensus       209 ~g~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~~~~~~l~~~~~~~~-~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~  287 (450)
T PRK08261        209 AGKVALVTGAARGIGAAIAEVLARDGAHVVCLDVPAAGEALAAVANRVG-GTALALDITAPDAPARIAEHLAERHGGLDI  287 (450)
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHcC-CeEEEEeCCCHHHHHHHHHHHHHhCCCCCE
Confidence            457899999999999999999999999999999854321  11111000 0134578888887766553       5899


Q ss_pred             EEECCCCCCC---CCCChhhHHHHHHHhhhhHHHHHHHHHcC--CCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCChh
Q 018503          120 VVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY  194 (355)
Q Consensus       120 vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~~y  194 (355)
                      |||+||....   .....+.....+++|+.++.++.+++...  .....++|++||.... ++.          +....|
T Consensus       288 vi~~AG~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~g~iv~~SS~~~~-~g~----------~~~~~Y  356 (450)
T PRK08261        288 VVHNAGITRDKTLANMDEARWDSVLAVNLLAPLRITEALLAAGALGDGGRIVGVSSISGI-AGN----------RGQTNY  356 (450)
T ss_pred             EEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhhcCCCEEEEECChhhc-CCC----------CCChHH
Confidence            9999997532   22345667888999999999999988661  1233689999987651 221          123457


Q ss_pred             -HHHHHHHHHHHHhcc---CCCCeEEEEEecEEEeCCCCcccchHHHHHHHhCCCCCCCCcceecccHHHHHHHHHHHHh
Q 018503          195 -LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALS  270 (355)
Q Consensus       195 -~~k~~~~~~~~~~~~---~~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~  270 (355)
                       .+|...+.+...+..   ..++.+..+.||.+-.+............. ....++      ......+|+|+++.+++.
T Consensus       357 ~asKaal~~~~~~la~el~~~gi~v~~v~PG~i~t~~~~~~~~~~~~~~-~~~~~l------~~~~~p~dva~~~~~l~s  429 (450)
T PRK08261        357 AASKAGVIGLVQALAPLLAERGITINAVAPGFIETQMTAAIPFATREAG-RRMNSL------QQGGLPVDVAETIAWLAS  429 (450)
T ss_pred             HHHHHHHHHHHHHHHHHHhhhCcEEEEEEeCcCcchhhhccchhHHHHH-hhcCCc------CCCCCHHHHHHHHHHHhC
Confidence             667644444333322   258999999999875432111110000000 000011      112346799999999987


Q ss_pred             CCC---CCCceEecCC
Q 018503          271 NPS---YRGVINGTAP  283 (355)
Q Consensus       271 ~~~---~~~~~~i~~~  283 (355)
                      ...   .+..+.++++
T Consensus       430 ~~~~~itG~~i~v~g~  445 (450)
T PRK08261        430 PASGGVTGNVVRVCGQ  445 (450)
T ss_pred             hhhcCCCCCEEEECCC
Confidence            533   2346666554

>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.49  E-value=7.9e-13  Score=112.50  Aligned_cols=205  Identities=17%  Similarity=0.110  Sum_probs=131.5

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhcc----CCCC-CC-ccCCCeeecCCcchhhhc-------
Q 018503           48 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELI----FPGK-KT-RFFPGVMIAEEPQWRDCI-------  114 (355)
Q Consensus        48 ~~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~----~~~~-~~-~~~~~~d~~~~~~~~~~~-------  114 (355)
                      ..++.|+|||||..||.+++.+|.+.|..++.+.|.....+..    .... .+ .....+|+.|.+++.+++       
T Consensus        10 ~~~kvVvITGASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~~~~f   89 (282)
T KOG1205|consen   10 LAGKVVLITGASSGIGEALAYELAKRGAKLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEWAIRHF   89 (282)
T ss_pred             hCCCEEEEeCCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHHHHHhc
Confidence            3457999999999999999999999999888888877665444    1111 11 113357999999887554       


Q ss_pred             CCCcEEEECCCCCCC---CCCChhhHHHHHHHhhhhHHHHHHHHHcC--CCCCCcEEEEeeeeeeeeCCCCCccccCCCC
Q 018503          115 QGSTAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSP  189 (355)
Q Consensus       115 ~~~d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~  189 (355)
                      .++|++|||||....   ......+...++++|+.|+..+..++..+  +.+.+++|.+||...  +-         ..|
T Consensus        90 g~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG--~~---------~~P  158 (282)
T KOG1205|consen   90 GRVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIAG--KM---------PLP  158 (282)
T ss_pred             CCCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEecccc--cc---------CCC
Confidence            478999999998643   23344556779999999977776665332  134679999999875  21         123


Q ss_pred             CCChh-HHHHHHHHHHHHhccCCCCeE--E--EEEecEEEeCCCCcccchHHHHHHHhCCCCCCCCcceecccHHHHHH-
Q 018503          190 SGNDY-LAEVCREWEGTALKVNKDVRL--A--LIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVN-  263 (355)
Q Consensus       190 ~~~~y-~~k~~~~~~~~~~~~~~~~~~--~--i~Rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~-  263 (355)
                      ..+.| .+|...+.+.+.++.+..-..  +  ++-||.|-......      .+....+.     .....+...+|++. 
T Consensus       159 ~~~~Y~ASK~Al~~f~etLR~El~~~~~~i~i~V~PG~V~Te~~~~------~~~~~~~~-----~~~~~~~~~~~~~~~  227 (282)
T KOG1205|consen  159 FRSIYSASKHALEGFFETLRQELIPLGTIIIILVSPGPIETEFTGK------ELLGEEGK-----SQQGPFLRTEDVADP  227 (282)
T ss_pred             cccccchHHHHHHHHHHHHHHHhhccCceEEEEEecCceeecccch------hhcccccc-----ccccchhhhhhhhhH
Confidence            34467 888888877777766553222  1  46777765442111      00000010     22233455566644 


Q ss_pred             -HHHHHHhCCCC
Q 018503          264 -LIYEALSNPSY  274 (355)
Q Consensus       264 -~~~~~~~~~~~  274 (355)
                       .+...+..+..
T Consensus       228 ~~~~~~i~~~~~  239 (282)
T KOG1205|consen  228 EAVAYAISTPPC  239 (282)
T ss_pred             HHHHHHHhcCcc
Confidence             77777776653

>PLN02780 ketoreductase/ oxidoreductase

Probab=99.48  E-value=1.1e-12  Score=116.96  Aligned_cols=195  Identities=15%  Similarity=0.080  Sum_probs=127.7

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCC------CCCccCCCeeecC--Ccch---hhhcC--C
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG------KKTRFFPGVMIAE--EPQW---RDCIQ--G  116 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~------~~~~~~~~~d~~~--~~~~---~~~~~--~  116 (355)
                      ++.++||||||.||++++++|+++|++|++++|+.++.......      ........+|+.+  .+.+   .+.+.  +
T Consensus        53 g~~~lITGAs~GIG~alA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~l~~~~~~~d  132 (320)
T PLN02780         53 GSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSGDIDEGVKRIKETIEGLD  132 (320)
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCCCcHHHHHHHHHHhcCCC
Confidence            46899999999999999999999999999999988765432211      0000122356653  2222   33334  3


Q ss_pred             CcEEEECCCCCCC-----CCCChhhHHHHHHHhhhhHHHHHHHHHcC--CCCCCcEEEEeeeeeeeeCCCCCccccCCCC
Q 018503          117 STAVVNLAGTPIG-----TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSP  189 (355)
Q Consensus       117 ~d~vi~~a~~~~~-----~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~  189 (355)
                      +|++||+||....     .+.+.+.....+++|+.++..+.+++...  ..+.+++|++||...  +...       ..|
T Consensus       133 idilVnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~--~~~~-------~~p  203 (320)
T PLN02780        133 VGVLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIINIGSGAA--IVIP-------SDP  203 (320)
T ss_pred             ccEEEEecCcCCCCCcccccCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCcEEEEEechhh--ccCC-------CCc
Confidence            5699999997422     12345566788999999998888776431  135678999999765  3100       012


Q ss_pred             CCChh-HHHHHHHHHHHHhcc---CCCCeEEEEEecEEEeCCCCcccchHHHHHHHhCCCCCCCCcceecccHHHHHHHH
Q 018503          190 SGNDY-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLI  265 (355)
Q Consensus       190 ~~~~y-~~k~~~~~~~~~~~~---~~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~  265 (355)
                      ....| .+|...+...+.+..   ..|++++.+.||.+-.+....           ..     .  ..-....+++|+.+
T Consensus       204 ~~~~Y~aSKaal~~~~~~L~~El~~~gI~V~~v~PG~v~T~~~~~-----------~~-----~--~~~~~~p~~~A~~~  265 (320)
T PLN02780        204 LYAVYAATKAYIDQFSRCLYVEYKKSGIDVQCQVPLYVATKMASI-----------RR-----S--SFLVPSSDGYARAA  265 (320)
T ss_pred             cchHHHHHHHHHHHHHHHHHHHHhccCeEEEEEeeCceecCcccc-----------cC-----C--CCCCCCHHHHHHHH
Confidence            34567 777766665555443   248999999999987653210           00     0  01135789999999


Q ss_pred             HHHHhC
Q 018503          266 YEALSN  271 (355)
Q Consensus       266 ~~~~~~  271 (355)
                      +..+..
T Consensus       266 ~~~~~~  271 (320)
T PLN02780        266 LRWVGY  271 (320)
T ss_pred             HHHhCC
Confidence            999964

>PRK05599 hypothetical protein; Provisional

Probab=99.47  E-value=3.4e-12  Score=109.74  Aligned_cols=200  Identities=15%  Similarity=0.114  Sum_probs=127.2

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCC----CCCC-ccCCCeeecCCcchhhhc-------CCCc
Q 018503           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP----GKKT-RFFPGVMIAEEPQWRDCI-------QGST  118 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~~~-~~~~~~d~~~~~~~~~~~-------~~~d  118 (355)
                      |+++||||++.||.+++++|. +|++|++++|+.++......    .... .....+|+.|.+++.+++       .++|
T Consensus         1 ~~vlItGas~GIG~aia~~l~-~g~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id   79 (246)
T PRK05599          1 MSILILGGTSDIAGEIATLLC-HGEDVVLAARRPEAAQGLASDLRQRGATSVHVLSFDAQDLDTHRELVKQTQELAGEIS   79 (246)
T ss_pred             CeEEEEeCccHHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEcccCCHHHHHHHHHHHHHhcCCCC
Confidence            579999999999999999998 59999999998766543211    1100 113457888888776554       3589


Q ss_pred             EEEECCCCCCCC---CCChhhHHHHHHHhhhhHHHHHHH----HHcCCCCCCcEEEEeeeeeeeeCCCCCccccCCCCCC
Q 018503          119 AVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDL----INESPEGVRPSVLVSATALGYYGTSETEVFDESSPSG  191 (355)
Q Consensus       119 ~vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~a----~~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~  191 (355)
                      ++||+||.....   ........+..++|+.+...++.+    +.+. ....++|++||...  +-.         .+..
T Consensus        80 ~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~-~~~g~Iv~isS~~~--~~~---------~~~~  147 (246)
T PRK05599         80 LAVVAFGILGDQERAETDEAHAVEIATVDYTAQVSMLTVLADELRAQ-TAPAAIVAFSSIAG--WRA---------RRAN  147 (246)
T ss_pred             EEEEecCcCCCchhhhcCcHHHHHHHHHHHHhHHHHHHHHHHHHHhc-CCCCEEEEEecccc--ccC---------CcCC
Confidence            999999974321   223333455667788777655544    3331 22468999999754  211         1223


Q ss_pred             Chh-HHHHHHHHHHHHhcc---CCCCeEEEEEecEEEeCCCCcccchHHHHHHHhCCCCCCCCcceecccHHHHHHHHHH
Q 018503          192 NDY-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYE  267 (355)
Q Consensus       192 ~~y-~~k~~~~~~~~~~~~---~~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~  267 (355)
                      ..| .+|...+.+.+.+..   ..+++++.+.||.+..+.....            .+   .  .. ....+|+|++++.
T Consensus       148 ~~Y~asKaa~~~~~~~la~el~~~~I~v~~v~PG~v~T~~~~~~------------~~---~--~~-~~~pe~~a~~~~~  209 (246)
T PRK05599        148 YVYGSTKAGLDAFCQGLADSLHGSHVRLIIARPGFVIGSMTTGM------------KP---A--PM-SVYPRDVAAAVVS  209 (246)
T ss_pred             cchhhHHHHHHHHHHHHHHHhcCCCceEEEecCCcccchhhcCC------------CC---C--CC-CCCHHHHHHHHHH
Confidence            457 677665555444333   3489999999998876531100            00   0  00 2578999999999


Q ss_pred             HHhCCCCCCceEec
Q 018503          268 ALSNPSYRGVINGT  281 (355)
Q Consensus       268 ~~~~~~~~~~~~i~  281 (355)
                      ++......+.+.+.
T Consensus       210 ~~~~~~~~~~~~~~  223 (246)
T PRK05599        210 AITSSKRSTTLWIP  223 (246)
T ss_pred             HHhcCCCCceEEeC
Confidence            99986433444444

>PRK06484 short chain dehydrogenase; Validated

Probab=99.46  E-value=1.6e-12  Score=124.16  Aligned_cols=206  Identities=19%  Similarity=0.134  Sum_probs=134.4

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCC-CCCccCCCeeecCCcchhhhcC-------CCcEEE
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-KKTRFFPGVMIAEEPQWRDCIQ-------GSTAVV  121 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~-------~~d~vi  121 (355)
                      .++++||||++.||.+++++|.++|++|++++|+.+........ ........+|+.|++++.++++       ++|++|
T Consensus         5 ~k~~lITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~li   84 (520)
T PRK06484          5 SRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSLGPDHHALAMDVSDEAQIREGFEQLHREFGRIDVLV   84 (520)
T ss_pred             CeEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEeccCCHHHHHHHHHHHHHHhCCCCEEE
Confidence            46899999999999999999999999999999987664433221 1111134578889888776653       589999


Q ss_pred             ECCCCCCC-----CCCChhhHHHHHHHhhhhHHHHHHHHHcC--CCCC-CcEEEEeeeeeeeeCCCCCccccCCCCCCCh
Q 018503          122 NLAGTPIG-----TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGV-RPSVLVSATALGYYGTSETEVFDESSPSGND  193 (355)
Q Consensus       122 ~~a~~~~~-----~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~-~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~~  193 (355)
                      |+||....     ...+.+.+...+++|+.++..+++++...  ..+. .++|++||...  ...         .+....
T Consensus        85 ~nag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~~iv~isS~~~--~~~---------~~~~~~  153 (520)
T PRK06484         85 NNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVAREALRLMIEQGHGAAIVNVASGAG--LVA---------LPKRTA  153 (520)
T ss_pred             ECCCcCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCeEEEECCccc--CCC---------CCCCch
Confidence            99986311     23455667889999999999888777542  1223 38999998765  211         122345


Q ss_pred             h-HHHHHHHHHHHHhccC---CCCeEEEEEecEEEeCCCCcccc--hHHHHHHHhCCCCCCCCcceecccHHHHHHHHHH
Q 018503          194 Y-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAK--MIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYE  267 (355)
Q Consensus       194 y-~~k~~~~~~~~~~~~~---~~~~~~i~Rp~~i~G~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~  267 (355)
                      | .+|...+.+.+.+..+   .+++++.+.|+.+..+.......  ...........+      ...+...+|+|+++..
T Consensus       154 Y~asKaal~~l~~~la~e~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~va~~v~~  227 (520)
T PRK06484        154 YSASKAAVISLTRSLACEWAAKGIRVNAVLPGYVRTQMVAELERAGKLDPSAVRSRIP------LGRLGRPEEIAEAVFF  227 (520)
T ss_pred             HHHHHHHHHHHHHHHHHHhhhhCeEEEEEccCCcCchhhhhhcccchhhhHHHHhcCC------CCCCcCHHHHHHHHHH
Confidence            7 6776666655544443   47999999999886653211100  000000011111      1125678999999999


Q ss_pred             HHhCC
Q 018503          268 ALSNP  272 (355)
Q Consensus       268 ~~~~~  272 (355)
                      ++...
T Consensus       228 l~~~~  232 (520)
T PRK06484        228 LASDQ  232 (520)
T ss_pred             HhCcc
Confidence            88753

>TIGR01289 LPOR light-dependent protochlorophyllide reductase

Probab=99.43  E-value=1.5e-12  Score=116.06  Aligned_cols=223  Identities=15%  Similarity=0.101  Sum_probs=133.6

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCC-CeEEEEecCCchhhccCCCC----CCccCCCeeecCCcchhhhc-------CCC
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADN-HQVRVLTRSRSKAELIFPGK----KTRFFPGVMIAEEPQWRDCI-------QGS  117 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~----~~~~~~~~d~~~~~~~~~~~-------~~~  117 (355)
                      +++++||||++.||.+++++|+++| ++|++++|+.+.........    .......+|+.+.+++.+++       .++
T Consensus         3 ~k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i   82 (314)
T TIGR01289         3 KPTVIITGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSLGMPKDSYTIMHLDLGSLDSVRQFVQQFRESGRPL   82 (314)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEcCCCCHHHHHHHHHHHHHhCCCC
Confidence            4689999999999999999999999 99999999876543221110    00012346888887766554       358


Q ss_pred             cEEEECCCCCCC----CCCChhhHHHHHHHhhhhHHHHHHHHHcC--CC--CCCcEEEEeeeeeeeeCCCCC----ccc-
Q 018503          118 TAVVNLAGTPIG----TRWSSEIKKEIKESRIRVTSKVVDLINES--PE--GVRPSVLVSATALGYYGTSET----EVF-  184 (355)
Q Consensus       118 d~vi~~a~~~~~----~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~--~~~~~v~~Ss~~~~~yg~~~~----~~~-  184 (355)
                      |++||+||....    .....+.....+++|+.++..+++++...  +.  +..++|++||...  +.....    .+. 
T Consensus        83 D~lI~nAG~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~g~IV~vsS~~~--~~~~~~~~~~~~~~  160 (314)
T TIGR01289        83 DALVCNAAVYFPTAKEPRFTADGFELSVGTNHLGHFLLCNLLLDDLKNSPNKDKRLIIVGSITG--NTNTLAGNVPPKAN  160 (314)
T ss_pred             CEEEECCCccccCccccccCHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCCCCCeEEEEecCcc--ccccCCCcCCCccc
Confidence            999999996422    13345667888999999987776654331  02  2468999999865  321100    000 


Q ss_pred             -----------------cCC--CCCCChh-HHHHHHHHHHHHhcc----CCCCeEEEEEecEEEeCCC-Cccc-chHHHH
Q 018503          185 -----------------DES--SPSGNDY-LAEVCREWEGTALKV----NKDVRLALIRIGIVLGKDG-GALA-KMIPLF  238 (355)
Q Consensus       185 -----------------~e~--~~~~~~y-~~k~~~~~~~~~~~~----~~~~~~~i~Rp~~i~G~~~-~~~~-~~~~~~  238 (355)
                                       .+.  ..+...| .+|.........+..    ..++.++.++||.+..... .... .....+
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~T~l~~~~~~~~~~~~  240 (314)
T TIGR01289       161 LGDLSGLAAGFKAPIAMIDGKEFKGAKAYKDSKVCNMLTVRELHRRFHDETGITFASLYPGCIADTGLFREHVPLFRTLF  240 (314)
T ss_pred             ccccccccccCCCcccccCCCCcchhhhHHHhHHHHHHHHHHHHHHhccCCCeEEEEecCCcccCCcccccccHHHHHHH
Confidence                             001  1123457 777765444433322    2479999999999853321 1111 111111


Q ss_pred             HHHhCCCCCCCCcceecccHHHHHHHHHHHHhCCC--CCCceEe
Q 018503          239 MMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPS--YRGVING  280 (355)
Q Consensus       239 ~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~--~~~~~~i  280 (355)
                      ....... .     ..+...++.|+.++.++..+.  .+|.|.-
T Consensus       241 ~~~~~~~-~-----~~~~~~~~~a~~l~~~~~~~~~~~~g~~~~  278 (314)
T TIGR01289       241 PPFQKYI-T-----KGYVSEEEAGERLAQVVSDPKLKKSGVYWS  278 (314)
T ss_pred             HHHHHHH-h-----ccccchhhhhhhhHHhhcCcccCCCceeee
Confidence            1000000 0     124678999999999887643  3455543

This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.

>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.43  E-value=1.7e-12  Score=105.58  Aligned_cols=160  Identities=17%  Similarity=0.137  Sum_probs=109.5

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhCCC-eEEEEecCCchhhcc-------CCCCCCccCCCeeecCCcchhhhcC-------
Q 018503           51 MTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRSKAELI-------FPGKKTRFFPGVMIAEEPQWRDCIQ-------  115 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~-------~~~~~~~~~~~~d~~~~~~~~~~~~-------  115 (355)
                      ++++|+||+|++|.+++++|+++|+ .|+.++|+.......       ...........+|+.+++.+.+++.       
T Consensus         1 ~~~li~Ga~~~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   80 (180)
T smart00822        1 GTYLITGGLGGLGLELARWLAERGARHLVLLSRSGPDAPGAAELLAELEALGAEVTVVACDVADRAALAAALAAIPARLG   80 (180)
T ss_pred             CEEEEEcCCChHHHHHHHHHHHhhCCeEEEEeCCCCCCccHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            3699999999999999999999986 688888876443211       0111101123467777776666543       


Q ss_pred             CCcEEEECCCCCCC---CCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCC
Q 018503          116 GSTAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGN  192 (355)
Q Consensus       116 ~~d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~  192 (355)
                      .+|++||+++....   ..+..+.....++.|+.++..++++++.  .+.++++++||.... ++.          +...
T Consensus        81 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~--~~~~~ii~~ss~~~~-~~~----------~~~~  147 (180)
T smart00822       81 PLRGVIHAAGVLDDGLLANLTPERFAAVLAPKVDGAWNLHELTRD--LPLDFFVLFSSVAGV-LGN----------PGQA  147 (180)
T ss_pred             CeeEEEEccccCCccccccCCHHHHHHhhchHhHHHHHHHHHhcc--CCcceEEEEccHHHh-cCC----------CCch
Confidence            46999999986422   2334566678899999999999999977  677889999886542 332          1233


Q ss_pred             hh-HHHHHHHHHHHHhccCCCCeEEEEEecEEE
Q 018503          193 DY-LAEVCREWEGTALKVNKDVRLALIRIGIVL  224 (355)
Q Consensus       193 ~y-~~k~~~~~~~~~~~~~~~~~~~i~Rp~~i~  224 (355)
                      .| .+|...+.+..... ..+++.+.+.|+.+-
T Consensus       148 ~y~~sk~~~~~~~~~~~-~~~~~~~~~~~g~~~  179 (180)
T smart00822      148 NYAAANAFLDALAAHRR-ARGLPATSINWGAWA  179 (180)
T ss_pred             hhHHHHHHHHHHHHHHH-hcCCceEEEeecccc
Confidence            46 66666666654333 458888888887653

It uses NADPH to reduce the keto group to a hydroxy group.

>KOG4039 consensus Serine/threonine kinase TIP30/CC3 [Signal transduction mechanisms]

Probab=99.41  E-value=6.1e-13  Score=102.43  Aligned_cols=155  Identities=19%  Similarity=0.208  Sum_probs=107.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCC--CeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcCCCcEEEECCCC
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADN--HQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT  126 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~  126 (355)
                      .+|..+|.||||-.|+.+++++++.+  -+|+++.|.............   ...+|+..-+++...++++|+.+++.|-
T Consensus        17 q~~s~fvlGAtG~~G~~llk~~~E~~~FSKV~~i~RR~~~d~at~k~v~---q~~vDf~Kl~~~a~~~qg~dV~FcaLgT   93 (238)
T KOG4039|consen   17 QNMSGFVLGATGLCGGGLLKHAQEAPQFSKVYAILRRELPDPATDKVVA---QVEVDFSKLSQLATNEQGPDVLFCALGT   93 (238)
T ss_pred             hccceEEEeccccccHHHHHHHHhcccceeEEEEEeccCCCccccceee---eEEechHHHHHHHhhhcCCceEEEeecc
Confidence            45789999999999999999999987  489999998633222211110   1223444444555566799999999885


Q ss_pred             CCCCCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCChh-HHHHHHHHHHH
Q 018503          127 PIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-LAEVCREWEGT  205 (355)
Q Consensus       127 ~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~~y-~~k~~~~~~~~  205 (355)
                      +..    ....+.++.++-+....+.+++++  .|+++|+++||.++              + +.+.| |-|.+.|.+.+
T Consensus        94 TRg----kaGadgfykvDhDyvl~~A~~AKe--~Gck~fvLvSS~GA--------------d-~sSrFlY~k~KGEvE~~  152 (238)
T KOG4039|consen   94 TRG----KAGADGFYKVDHDYVLQLAQAAKE--KGCKTFVLVSSAGA--------------D-PSSRFLYMKMKGEVERD  152 (238)
T ss_pred             ccc----ccccCceEeechHHHHHHHHHHHh--CCCeEEEEEeccCC--------------C-cccceeeeeccchhhhh
Confidence            422    111335566777777788999999  89999999999776              1 12334 55666666666


Q ss_pred             HhccCCCCeEEEEEecEEEeCCC
Q 018503          206 ALKVNKDVRLALIRIGIVLGKDG  228 (355)
Q Consensus       206 ~~~~~~~~~~~i~Rp~~i~G~~~  228 (355)
                      ..... --+++|+|||.+.|...
T Consensus       153 v~eL~-F~~~~i~RPG~ll~~R~  174 (238)
T KOG4039|consen  153 VIELD-FKHIIILRPGPLLGERT  174 (238)
T ss_pred             hhhcc-ccEEEEecCcceecccc
Confidence            54432 23689999999999764

>PRK08303 short chain dehydrogenase; Provisional

Probab=99.36  E-value=1.3e-11  Score=109.26  Aligned_cols=211  Identities=15%  Similarity=0.002  Sum_probs=127.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCch----------hhcc----CCCCCCccCCCeeecCCcchhhhc
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSK----------AELI----FPGKKTRFFPGVMIAEEPQWRDCI  114 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~----------~~~~----~~~~~~~~~~~~d~~~~~~~~~~~  114 (355)
                      ..++++||||++.||.+++++|++.|++|++++|+...          ....    ...........+|+.|++++.+++
T Consensus         7 ~~k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~   86 (305)
T PRK08303          7 RGKVALVAGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTAAGGRGIAVQVDHLVPEQVRALV   86 (305)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecccccccccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHH
Confidence            45799999999999999999999999999999997421          1111    010111113457888888777655


Q ss_pred             -------CCCcEEEECC-CCCC-----C--CCCChhhHHHHHHHhhhhHHHHHHHHHcC--CCCCCcEEEEeeeeeeeeC
Q 018503          115 -------QGSTAVVNLA-GTPI-----G--TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYG  177 (355)
Q Consensus       115 -------~~~d~vi~~a-~~~~-----~--~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~~~~v~~Ss~~~~~yg  177 (355)
                             ..+|++||+| |...     .  .+...+.....+++|+.+...+++++...  ..+..++|++||.... ++
T Consensus        87 ~~~~~~~g~iDilVnnA~g~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~lp~m~~~~~g~IV~isS~~~~-~~  165 (305)
T PRK08303         87 ERIDREQGRLDILVNDIWGGEKLFEWGKPVWEHSLDKGLRMLRLAIDTHLITSHFALPLLIRRPGGLVVEITDGTAE-YN  165 (305)
T ss_pred             HHHHHHcCCccEEEECCcccccccccCCchhhcCHHHHHHHHHHhhHHHHHHHHHHHHHhhhCCCcEEEEECCcccc-cc
Confidence                   3589999999 6310     1  12234556677889999888777665432  1334689999985431 21


Q ss_pred             CCCCccccCCCCCCChh-HHHHHHHHHHHHhcc---CCCCeEEEEEecEEEeCCCCcccchHH-HH-HHHhCCCCCCCCc
Q 018503          178 TSETEVFDESSPSGNDY-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALAKMIP-LF-MMFAGGPLGSGQQ  251 (355)
Q Consensus       178 ~~~~~~~~e~~~~~~~y-~~k~~~~~~~~~~~~---~~~~~~~i~Rp~~i~G~~~~~~~~~~~-~~-~~~~~~~~~~~~~  251 (355)
                      ..       ..+....| .+|.....+.+.+..   ..|+++..+.||.+-.+.......... .+ ......+.     
T Consensus       166 ~~-------~~~~~~~Y~asKaal~~lt~~La~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~p~-----  233 (305)
T PRK08303        166 AT-------HYRLSVFYDLAKTSVNRLAFSLAHELAPHGATAVALTPGWLRSEMMLDAFGVTEENWRDALAKEPH-----  233 (305)
T ss_pred             Cc-------CCCCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEecCCccccHHHHHhhccCccchhhhhccccc-----
Confidence            10       01123457 777665555544333   247999999999885542100000000 00 00000010     


Q ss_pred             ceecccHHHHHHHHHHHHhCC
Q 018503          252 WFSWIHLDDIVNLIYEALSNP  272 (355)
Q Consensus       252 ~~~~i~v~Dva~~~~~~~~~~  272 (355)
                      ..-+...+|+|.+++.++..+
T Consensus       234 ~~~~~~peevA~~v~fL~s~~  254 (305)
T PRK08303        234 FAISETPRYVGRAVAALAADP  254 (305)
T ss_pred             cccCCCHHHHHHHHHHHHcCc
Confidence            112346899999999999865

>KOG4288 consensus Predicted oxidoreductase [General function prediction only]

Probab=99.36  E-value=1e-11  Score=99.85  Aligned_cols=213  Identities=19%  Similarity=0.193  Sum_probs=139.4

Q ss_pred             EEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcCCCcEEEECCCCCCCCC
Q 018503           52 TVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTPIGTR  131 (355)
Q Consensus        52 ~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~~~~~~  131 (355)
                      +.++.|+.||.|.++++.....++.|-.+.|+..+......... ..+...+....+-++..+.++..++-+++..    
T Consensus        54 ~tlvlggnpfsgs~vlk~A~~vv~svgilsen~~k~~l~sw~~~-vswh~gnsfssn~~k~~l~g~t~v~e~~ggf----  128 (283)
T KOG4288|consen   54 WTLVLGGNPFSGSEVLKNATNVVHSVGILSENENKQTLSSWPTY-VSWHRGNSFSSNPNKLKLSGPTFVYEMMGGF----  128 (283)
T ss_pred             HHhhhcCCCcchHHHHHHHHhhceeeeEeecccCcchhhCCCcc-cchhhccccccCcchhhhcCCcccHHHhcCc----
Confidence            68999999999999999999999999999999764322111110 0134456666666777777888999888753    


Q ss_pred             CChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCChh-HHHHHHHHHHHHhccC
Q 018503          132 WSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-LAEVCREWEGTALKVN  210 (355)
Q Consensus       132 ~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~~y-~~k~~~~~~~~~~~~~  210 (355)
                         .....+..+|-+...+-.+++++  .++++|+|+|...   ||-..   +     ....| .+|..+|.  +.... 
T Consensus       129 ---gn~~~m~~ing~ani~a~kaa~~--~gv~~fvyISa~d---~~~~~---~-----i~rGY~~gKR~AE~--Ell~~-  189 (283)
T KOG4288|consen  129 ---GNIILMDRINGTANINAVKAAAK--AGVPRFVYISAHD---FGLPP---L-----IPRGYIEGKREAEA--ELLKK-  189 (283)
T ss_pred             ---cchHHHHHhccHhhHHHHHHHHH--cCCceEEEEEhhh---cCCCC---c-----cchhhhccchHHHH--HHHHh-
Confidence               23446667788888888888888  8999999999754   33110   0     11245 55544444  43333 


Q ss_pred             CCCeEEEEEecEEEeCCC-Cc----ccchHHHH-HHHhC--CCC----CCCCcceecccHHHHHHHHHHHHhCCCCCCce
Q 018503          211 KDVRLALIRIGIVLGKDG-GA----LAKMIPLF-MMFAG--GPL----GSGQQWFSWIHLDDIVNLIYEALSNPSYRGVI  278 (355)
Q Consensus       211 ~~~~~~i~Rp~~i~G~~~-~~----~~~~~~~~-~~~~~--~~~----~~~~~~~~~i~v~Dva~~~~~~~~~~~~~~~~  278 (355)
                      ++.+-+++|||++||.+. +.    +......+ .....  +++    --+......+.+++||.+.+.+++++...|+ 
T Consensus       190 ~~~rgiilRPGFiyg~R~v~g~~~pL~~vg~pl~~~~~~a~k~~~kLp~lg~l~~ppvnve~VA~aal~ai~dp~f~Gv-  268 (283)
T KOG4288|consen  190 FRFRGIILRPGFIYGTRNVGGIKSPLHTVGEPLEMVLKFALKPLNKLPLLGPLLAPPVNVESVALAALKAIEDPDFKGV-  268 (283)
T ss_pred             cCCCceeeccceeecccccCcccccHHhhhhhHHHHHHhhhchhhcCcccccccCCCcCHHHHHHHHHHhccCCCcCce-
Confidence            368899999999999853 11    11111111 11111  121    2345667899999999999999999874444 


Q ss_pred             EecCCCccCHHHHHHHHH
Q 018503          279 NGTAPNPVRLAEMCDHLG  296 (355)
Q Consensus       279 ~i~~~~~~s~~el~~~i~  296 (355)
                             +++.|+.++-.
T Consensus       269 -------v~i~eI~~~a~  279 (283)
T KOG4288|consen  269 -------VTIEEIKKAAH  279 (283)
T ss_pred             -------eeHHHHHHHHH
Confidence                   45556555443

>TIGR01500 sepiapter_red sepiapterin reductase

Probab=99.35  E-value=1.2e-11  Score=107.10  Aligned_cols=201  Identities=14%  Similarity=0.064  Sum_probs=127.0

Q ss_pred             EEEEEcCCchHHHHHHHHHHh----CCCeEEEEecCCchhhccCCC------CCCccCCCeeecCCcchhhhcCC-----
Q 018503           52 TVSVTGATGFIGRRLVQRLQA----DNHQVRVLTRSRSKAELIFPG------KKTRFFPGVMIAEEPQWRDCIQG-----  116 (355)
Q Consensus        52 ~IlVtGatG~iG~~l~~~L~~----~g~~V~~~~r~~~~~~~~~~~------~~~~~~~~~d~~~~~~~~~~~~~-----  116 (355)
                      .++||||+|.||.+++++|++    .|++|++++|+.+........      ........+|+.+.+++.++++.     
T Consensus         2 ~vlItGas~GIG~~~a~~la~~~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~   81 (256)
T TIGR01500         2 VCLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQLKAEIGAERSGLRVVRVSLDLGAEAGLEQLLKALRELP   81 (256)
T ss_pred             EEEEecCCCchHHHHHHHHHHhhccCCcEEEEEEcCHHHHHHHHHHHHhcCCCceEEEEEeccCCHHHHHHHHHHHHhcc
Confidence            589999999999999999997    799999999987654332110      00011335688888877665531     


Q ss_pred             ------CcEEEECCCCCCC--CC----CChhhHHHHHHHhhhhHHHHHHHHHcC-C-C-C-CCcEEEEeeeeeeeeCCCC
Q 018503          117 ------STAVVNLAGTPIG--TR----WSSEIKKEIKESRIRVTSKVVDLINES-P-E-G-VRPSVLVSATALGYYGTSE  180 (355)
Q Consensus       117 ------~d~vi~~a~~~~~--~~----~~~~~~~~~~~~n~~~~~~l~~a~~~~-~-~-~-~~~~v~~Ss~~~~~yg~~~  180 (355)
                            .|++||+||....  ..    ...+.....+++|+.++..+.+++... . . + .+++|++||...  +..  
T Consensus        82 g~~~~~~~~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~~~l~~~~~~~~~iv~isS~~~--~~~--  157 (256)
T TIGR01500        82 RPKGLQRLLLINNAGTLGDVSKGFVDLSDSTQVQNYWALNLTSMLCLTSSVLKAFKDSPGLNRTVVNISSLCA--IQP--  157 (256)
T ss_pred             ccCCCceEEEEeCCcccCccccccccCCCHHHHHHHHHhhhHHHHHHHHHHHHHHhhcCCCCCEEEEECCHHh--CCC--
Confidence                  2689999996321  11    123566789999999988777665432 1 1 2 357999998765  221  


Q ss_pred             CccccCCCCCCChh-HHHHHHHHHHHHhcc---CCCCeEEEEEecEEEeCCCCcc------cchHHHHHHHhCCCCCCCC
Q 018503          181 TEVFDESSPSGNDY-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGAL------AKMIPLFMMFAGGPLGSGQ  250 (355)
Q Consensus       181 ~~~~~e~~~~~~~y-~~k~~~~~~~~~~~~---~~~~~~~i~Rp~~i~G~~~~~~------~~~~~~~~~~~~~~~~~~~  250 (355)
                             .+....| .+|...+.+...+..   ..++.+..+.||.+-.+.....      ......+.  ...+.    
T Consensus       158 -------~~~~~~Y~asKaal~~l~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~--~~~~~----  224 (256)
T TIGR01500       158 -------FKGWALYCAGKAARDMLFQVLALEEKNPNVRVLNYAPGVLDTDMQQQVREESVDPDMRKGLQ--ELKAK----  224 (256)
T ss_pred             -------CCCchHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCCcccchHHHHHHHhcCChhHHHHHH--HHHhc----
Confidence                   1223467 777766666555433   2479999999998865421100      00000010  00011    


Q ss_pred             cceecccHHHHHHHHHHHHhC
Q 018503          251 QWFSWIHLDDIVNLIYEALSN  271 (355)
Q Consensus       251 ~~~~~i~v~Dva~~~~~~~~~  271 (355)
                        ..+...+|+|++++.++.+
T Consensus       225 --~~~~~p~eva~~~~~l~~~  243 (256)
T TIGR01500       225 --GKLVDPKVSAQKLLSLLEK  243 (256)
T ss_pred             --CCCCCHHHHHHHHHHHHhc
Confidence              1267889999999999964

This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.

>PLN02730 enoyl-[acyl-carrier-protein] reductase

Probab=99.35  E-value=1.9e-10  Score=101.10  Aligned_cols=217  Identities=12%  Similarity=0.031  Sum_probs=130.4

Q ss_pred             CCCCEEEEEcC--CchHHHHHHHHHHhCCCeEEEEecCCchhhccC--------------CCCCC---ccCCCeee--cC
Q 018503           48 ASQMTVSVTGA--TGFIGRRLVQRLQADNHQVRVLTRSRSKAELIF--------------PGKKT---RFFPGVMI--AE  106 (355)
Q Consensus        48 ~~~~~IlVtGa--tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~--------------~~~~~---~~~~~~d~--~~  106 (355)
                      .+.++++||||  +..||.++++.|.+.|.+|++ .|.....+...              .....   .....+|+  .+
T Consensus         7 l~gk~alITGa~~s~GIG~a~A~~la~~Ga~Vv~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~   85 (303)
T PLN02730          7 LRGKRAFIAGVADDNGYGWAIAKALAAAGAEILV-GTWVPALNIFETSLRRGKFDESRKLPDGSLMEITKVYPLDAVFDT   85 (303)
T ss_pred             CCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEE-EeCcchhhHHHHhhhccccchhhhcccccccCcCeeeecceecCc
Confidence            45679999999  799999999999999999988 55433211110              00000   01233566  22


Q ss_pred             Cc------------------chhhhc-------CCCcEEEECCCCCC-----CCCCChhhHHHHHHHhhhhHHHHHHHHH
Q 018503          107 EP------------------QWRDCI-------QGSTAVVNLAGTPI-----GTRWSSEIKKEIKESRIRVTSKVVDLIN  156 (355)
Q Consensus       107 ~~------------------~~~~~~-------~~~d~vi~~a~~~~-----~~~~~~~~~~~~~~~n~~~~~~l~~a~~  156 (355)
                      .+                  ++.+++       ..+|++|||||...     ....+.+.+...+++|+.+...+++++.
T Consensus        86 ~~~~~~~~~~~~~~~~~~~~~v~~l~~~i~~~~G~iDiLVnNAG~~~~~~~~~~~~~~e~~~~~~~vN~~~~~~l~~~~~  165 (303)
T PLN02730         86 PEDVPEDVKTNKRYAGSSNWTVQEVAESVKADFGSIDILVHSLANGPEVTKPLLETSRKGYLAAISASSYSFVSLLQHFG  165 (303)
T ss_pred             cccCchhhhcccccccCCHHHHHHHHHHHHHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHH
Confidence            22                  444444       35899999997421     1234567788999999999988887765


Q ss_pred             cC-CCCCCcEEEEeeeeeeeeCCCCCccccCCCCCC-Chh-HHHHHHHHHHHHhccC----CCCeEEEEEecEEEeCCCC
Q 018503          157 ES-PEGVRPSVLVSATALGYYGTSETEVFDESSPSG-NDY-LAEVCREWEGTALKVN----KDVRLALIRIGIVLGKDGG  229 (355)
Q Consensus       157 ~~-~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~-~~y-~~k~~~~~~~~~~~~~----~~~~~~i~Rp~~i~G~~~~  229 (355)
                      .. ..+ .++|++||...  ...         .+.. ..| .+|...+.+.+.+..+    .|+++..|.||.+-.+...
T Consensus       166 p~m~~~-G~II~isS~a~--~~~---------~p~~~~~Y~asKaAl~~l~~~la~El~~~~gIrVn~V~PG~v~T~~~~  233 (303)
T PLN02730        166 PIMNPG-GASISLTYIAS--ERI---------IPGYGGGMSSAKAALESDTRVLAFEAGRKYKIRVNTISAGPLGSRAAK  233 (303)
T ss_pred             HHHhcC-CEEEEEechhh--cCC---------CCCCchhhHHHHHHHHHHHHHHHHHhCcCCCeEEEEEeeCCccCchhh
Confidence            52 122 68999998654  110         1112 247 7776665555444432    4799999999988765322


Q ss_pred             cccchHHHHHH-HhCCCCCCCCcceecccHHHHHHHHHHHHhCCC---CCCceEecCC
Q 018503          230 ALAKMIPLFMM-FAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPS---YRGVINGTAP  283 (355)
Q Consensus       230 ~~~~~~~~~~~-~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~---~~~~~~i~~~  283 (355)
                      .....-..... ....++      ..+...+|++.+++.++....   .+..+.+.++
T Consensus       234 ~~~~~~~~~~~~~~~~pl------~r~~~peevA~~~~fLaS~~a~~itG~~l~vdGG  285 (303)
T PLN02730        234 AIGFIDDMIEYSYANAPL------QKELTADEVGNAAAFLASPLASAITGATIYVDNG  285 (303)
T ss_pred             cccccHHHHHHHHhcCCC------CCCcCHHHHHHHHHHHhCccccCccCCEEEECCC
Confidence            11000000111 111111      125678999999999997543   3335555444

>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]

Probab=99.32  E-value=1.2e-10  Score=91.41  Aligned_cols=219  Identities=16%  Similarity=0.135  Sum_probs=139.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCC---CCccCCCeeecCCcchhhhcC-------CCc
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGK---KTRFFPGVMIAEEPQWRDCIQ-------GST  118 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~---~~~~~~~~d~~~~~~~~~~~~-------~~d  118 (355)
                      +.+..+||||+..||+++++.|.++|++|.+.+++....+......   .......+|+.+++++...++       .++
T Consensus        13 ~sk~~~vtGg~sGIGrAia~~la~~Garv~v~dl~~~~A~ata~~L~g~~~h~aF~~DVS~a~~v~~~l~e~~k~~g~ps   92 (256)
T KOG1200|consen   13 MSKVAAVTGGSSGIGRAIAQLLAKKGARVAVADLDSAAAEATAGDLGGYGDHSAFSCDVSKAHDVQNTLEEMEKSLGTPS   92 (256)
T ss_pred             hcceeEEecCCchHHHHHHHHHHhcCcEEEEeecchhhHHHHHhhcCCCCccceeeeccCcHHHHHHHHHHHHHhcCCCc
Confidence            3468999999999999999999999999999999877654332211   111133478888777665442       579


Q ss_pred             EEEECCCCCCC---CCCChhhHHHHHHHhhhhHHHHHHHHHcC----CCCCCcEEEEeeeeeeeeCCCCCccccCCCCCC
Q 018503          119 AVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES----PEGVRPSVLVSATALGYYGTSETEVFDESSPSG  191 (355)
Q Consensus       119 ~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~~~~----~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~  191 (355)
                      ++++|||...+   .+...+++.+.+.+|+.+...+.+++.+.    ..+.-.+|.+||.-.. .|+-....+.....-.
T Consensus        93 vlVncAGItrD~~Llrmkq~qwd~vi~vNL~gvfl~tqaa~r~~~~~~~~~~sIiNvsSIVGk-iGN~GQtnYAAsK~Gv  171 (256)
T KOG1200|consen   93 VLVNCAGITRDGLLLRMKQEQWDSVIAVNLTGVFLVTQAAVRAMVMNQQQGLSIINVSSIVGK-IGNFGQTNYAASKGGV  171 (256)
T ss_pred             EEEEcCccccccceeeccHHHHHHHHHhhchhhHHHHHHHHHHHHHhcCCCceEEeehhhhcc-cccccchhhhhhcCce
Confidence            99999998654   45567889999999999988887776542    1222379999986321 3322222221111000


Q ss_pred             ChhHHHHHHHHHHHHhccCCCCeEEEEEecEEEeCCCCcccchHHHH--HHHhCCCCCCCCcceecccHHHHHHHHHHHH
Q 018503          192 NDYLAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLF--MMFAGGPLGSGQQWFSWIHLDDIVNLIYEAL  269 (355)
Q Consensus       192 ~~y~~k~~~~~~~~~~~~~~~~~~~i~Rp~~i~G~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~  269 (355)
                      -. .+|.......     ..++++..+.||+|-.|.....   .+.+  ++....|.+      .+-..+|+|..++.+.
T Consensus       172 Ig-ftktaArEla-----~knIrvN~VlPGFI~tpMT~~m---p~~v~~ki~~~iPmg------r~G~~EevA~~V~fLA  236 (256)
T KOG1200|consen  172 IG-FTKTAARELA-----RKNIRVNVVLPGFIATPMTEAM---PPKVLDKILGMIPMG------RLGEAEEVANLVLFLA  236 (256)
T ss_pred             ee-eeHHHHHHHh-----hcCceEeEeccccccChhhhhc---CHHHHHHHHccCCcc------ccCCHHHHHHHHHHHh
Confidence            11 2232222222     1489999999999988864322   1211  333333432      2567899999999998


Q ss_pred             hCCC---CCCceEecCC
Q 018503          270 SNPS---YRGVINGTAP  283 (355)
Q Consensus       270 ~~~~---~~~~~~i~~~  283 (355)
                      ....   .+..+.+.+|
T Consensus       237 S~~ssYiTG~t~evtGG  253 (256)
T KOG1200|consen  237 SDASSYITGTTLEVTGG  253 (256)
T ss_pred             ccccccccceeEEEecc
Confidence            6544   2335666554

>PRK08862 short chain dehydrogenase; Provisional

Probab=99.32  E-value=2.7e-11  Score=102.66  Aligned_cols=163  Identities=10%  Similarity=-0.044  Sum_probs=106.7

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCC----CCCCccCCCeeecCCcchhhhc-------C-CC
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP----GKKTRFFPGVMIAEEPQWRDCI-------Q-GS  117 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~~d~~~~~~~~~~~-------~-~~  117 (355)
                      .++++||||++.||++++++|+++|++|+++.|+.+.......    .........+|+.+++++.+++       . .+
T Consensus         5 ~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~i   84 (227)
T PRK08862          5 SSIILITSAGSVLGRTISCHFARLGATLILCDQDQSALKDTYEQCSALTDNVYSFQLKDFSQESIRHLFDAIEQQFNRAP   84 (227)
T ss_pred             CeEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCCC
Confidence            4789999999999999999999999999999998765433211    1111112346788888776554       3 68


Q ss_pred             cEEEECCCCCCC----CCCChhhHHHHHHHhhhhHHHHHHHHHcC--CC-CCCcEEEEeeeeeeeeCCCCCccccCCCCC
Q 018503          118 TAVVNLAGTPIG----TRWSSEIKKEIKESRIRVTSKVVDLINES--PE-GVRPSVLVSATALGYYGTSETEVFDESSPS  190 (355)
Q Consensus       118 d~vi~~a~~~~~----~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~-~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~  190 (355)
                      |++||+||....    .+.+.+.....+++|+.++..+++++...  .. ....+|++||...  +            +.
T Consensus        85 D~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~--~------------~~  150 (227)
T PRK08862         85 DVLVNNWTSSPLPSLFDEQPSESFIQQLSSLASTLFTYGQVAAERMRKRNKKGVIVNVISHDD--H------------QD  150 (227)
T ss_pred             CEEEECCccCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCceEEEEecCCC--C------------CC
Confidence            999999974211    12233445556677877766665543221  02 2458999988533  1            12


Q ss_pred             CChh-HHHHHHHHHHHHhcc---CCCCeEEEEEecEEEeC
Q 018503          191 GNDY-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGK  226 (355)
Q Consensus       191 ~~~y-~~k~~~~~~~~~~~~---~~~~~~~i~Rp~~i~G~  226 (355)
                      ...| .+|.....+.+.+..   .+++++..+.||.+-.+
T Consensus       151 ~~~Y~asKaal~~~~~~la~el~~~~Irvn~v~PG~i~t~  190 (227)
T PRK08862        151 LTGVESSNALVSGFTHSWAKELTPFNIRVGGVVPSIFSAN  190 (227)
T ss_pred             cchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcCcCC
Confidence            3456 667665555444433   35899999999988776

>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.31  E-value=8.9e-11  Score=99.22  Aligned_cols=197  Identities=13%  Similarity=0.060  Sum_probs=131.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCC---CCccCCCeeecCCcchhhhc-------CCCc
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGK---KTRFFPGVMIAEEPQWRDCI-------QGST  118 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~---~~~~~~~~d~~~~~~~~~~~-------~~~d  118 (355)
                      ++..||||||++.+|+.++.+++++|..+...+.+.....+.....   .+...-.+|+.+.+++.+..       .++|
T Consensus        37 ~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~~g~~~~y~cdis~~eei~~~a~~Vk~e~G~V~  116 (300)
T KOG1201|consen   37 SGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRKIGEAKAYTCDISDREEIYRLAKKVKKEVGDVD  116 (300)
T ss_pred             cCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHhcCceeEEEecCCCHHHHHHHHHHHHHhcCCce
Confidence            3468999999999999999999999999999999876654332211   01123457999888665433       4789


Q ss_pred             EEEECCCCCCC---CCCChhhHHHHHHHhhhhH----HHHHHHHHcCCCCCCcEEEEeeeeeeeeCCCCCccccCCCCCC
Q 018503          119 AVVNLAGTPIG---TRWSSEIKKEIKESRIRVT----SKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSG  191 (355)
Q Consensus       119 ~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~----~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~  191 (355)
                      ++||+||....   -+.+.+..+..+++|+.+.    +.++....+  .+..++|-++|.... +|.          +..
T Consensus       117 ILVNNAGI~~~~~ll~~~d~ei~k~~~vN~~~~f~t~kaFLP~M~~--~~~GHIV~IaS~aG~-~g~----------~gl  183 (300)
T KOG1201|consen  117 ILVNNAGIVTGKKLLDCSDEEIQKTFDVNTIAHFWTTKAFLPKMLE--NNNGHIVTIASVAGL-FGP----------AGL  183 (300)
T ss_pred             EEEeccccccCCCccCCCHHHHHHHHHHhhHHHHHHHHHHhHHHHh--cCCceEEEehhhhcc-cCC----------ccc
Confidence            99999998643   2334555678899999984    445555555  577899999998752 331          123


Q ss_pred             Chh-HHHHHHHHHHH-----Hhc-cCCCCeEEEEEecEEEeCCCCcccchHHHHHHHhCCCCCCCCcceecccHHHHHHH
Q 018503          192 NDY-LAEVCREWEGT-----ALK-VNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNL  264 (355)
Q Consensus       192 ~~y-~~k~~~~~~~~-----~~~-~~~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~  264 (355)
                      ..| .+|.......+     ... ...|++.+.+.|+.+-...   +          .+ . ..-...++.+..+.+|+.
T Consensus       184 ~~YcaSK~a~vGfhesL~~EL~~~~~~~IktTlv~P~~i~Tgm---f----------~~-~-~~~~~l~P~L~p~~va~~  248 (300)
T KOG1201|consen  184 ADYCASKFAAVGFHESLSMELRALGKDGIKTTLVCPYFINTGM---F----------DG-A-TPFPTLAPLLEPEYVAKR  248 (300)
T ss_pred             hhhhhhHHHHHHHHHHHHHHHHhcCCCCeeEEEEeeeeccccc---c----------CC-C-CCCccccCCCCHHHHHHH
Confidence            345 55544322222     222 2237999999998765221   1          01 0 011234568999999999


Q ss_pred             HHHHHhCCC
Q 018503          265 IYEALSNPS  273 (355)
Q Consensus       265 ~~~~~~~~~  273 (355)
                      ++..+..+.
T Consensus       249 Iv~ai~~n~  257 (300)
T KOG1201|consen  249 IVEAILTNQ  257 (300)
T ss_pred             HHHHHHcCC
Confidence            999998765

>PLN00015 protochlorophyllide reductase

Probab=99.30  E-value=2.3e-11  Score=108.11  Aligned_cols=212  Identities=13%  Similarity=0.103  Sum_probs=126.0

Q ss_pred             EEEcCCchHHHHHHHHHHhCC-CeEEEEecCCchhhccCCC----CCCccCCCeeecCCcchhhhc-------CCCcEEE
Q 018503           54 SVTGATGFIGRRLVQRLQADN-HQVRVLTRSRSKAELIFPG----KKTRFFPGVMIAEEPQWRDCI-------QGSTAVV  121 (355)
Q Consensus        54 lVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~----~~~~~~~~~d~~~~~~~~~~~-------~~~d~vi  121 (355)
                      +||||++.||.+++++|+++| ++|++++|+.+........    ........+|+.|.+++.+++       ..+|++|
T Consensus         1 lITGas~GIG~aia~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~lI   80 (308)
T PLN00015          1 IITGASSGLGLATAKALAETGKWHVVMACRDFLKAERAAKSAGMPKDSYTVMHLDLASLDSVRQFVDNFRRSGRPLDVLV   80 (308)
T ss_pred             CEeCCCChHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEecCCCHHHHHHHHHHHHhcCCCCCEEE
Confidence            599999999999999999999 9999999987654322111    000112357888888776655       2579999


Q ss_pred             ECCCCCCC----CCCChhhHHHHHHHhhhhHHHHHHHHHcC--CCC--CCcEEEEeeeeeeeeCCCC-C--c--------
Q 018503          122 NLAGTPIG----TRWSSEIKKEIKESRIRVTSKVVDLINES--PEG--VRPSVLVSATALGYYGTSE-T--E--------  182 (355)
Q Consensus       122 ~~a~~~~~----~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~--~~~~v~~Ss~~~~~yg~~~-~--~--------  182 (355)
                      |+||....    ...+.+.....+++|+.++..+++++...  ..+  .+++|++||...  +-... +  .        
T Consensus        81 nnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~~g~IV~vsS~~~--~~~~~~~~~~~~~~~~~~  158 (308)
T PLN00015         81 CNAAVYLPTAKEPTFTADGFELSVGTNHLGHFLLSRLLLDDLKKSDYPSKRLIIVGSITG--NTNTLAGNVPPKANLGDL  158 (308)
T ss_pred             ECCCcCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCCCEEEEEecccc--ccccccccCCCccchhhh
Confidence            99997422    23355677889999999977776654331  133  468999999754  21000 0  0        


Q ss_pred             --------------cccCC-CCCCChh-HHHHHHHHHHHHhcc----CCCCeEEEEEecEEEeCCC-CcccchHHHH-HH
Q 018503          183 --------------VFDES-SPSGNDY-LAEVCREWEGTALKV----NKDVRLALIRIGIVLGKDG-GALAKMIPLF-MM  240 (355)
Q Consensus       183 --------------~~~e~-~~~~~~y-~~k~~~~~~~~~~~~----~~~~~~~i~Rp~~i~G~~~-~~~~~~~~~~-~~  240 (355)
                                    +.++. ......| .+|.........+..    ..|+.++.++||.+..... .......... ..
T Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~aY~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t~~~~~~~~~~~~~~~~  238 (308)
T PLN00015        159 RGLAGGLNGLNSSAMIDGGEFDGAKAYKDSKVCNMLTMQEFHRRYHEETGITFASLYPGCIATTGLFREHIPLFRLLFPP  238 (308)
T ss_pred             hhhhcccCCccchhhccccCCcHHHHHhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCccccccccHHHHHHHHH
Confidence                          00001 1123347 677654443232222    2479999999999954321 1111010000 00


Q ss_pred             HhCCCCCCCCcceecccHHHHHHHHHHHHhCCC
Q 018503          241 FAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPS  273 (355)
Q Consensus       241 ~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~  273 (355)
                      ....+.      ..+...++.|+.++.++....
T Consensus       239 ~~~~~~------~~~~~pe~~a~~~~~l~~~~~  265 (308)
T PLN00015        239 FQKYIT------KGYVSEEEAGKRLAQVVSDPS  265 (308)
T ss_pred             HHHHHh------cccccHHHhhhhhhhhccccc
Confidence            000000      124678999999999887543

>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

Probab=99.29  E-value=3.5e-11  Score=95.37  Aligned_cols=166  Identities=14%  Similarity=0.107  Sum_probs=112.3

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcC-------CCcEEEE
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ-------GSTAVVN  122 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-------~~d~vi~  122 (355)
                      +.+||||||+..||..|+++|.+.|.+|++..|+..................+|+.|.++.+++++       ..+++|+
T Consensus         5 gnTiLITGG~sGIGl~lak~f~elgN~VIi~gR~e~~L~e~~~~~p~~~t~v~Dv~d~~~~~~lvewLkk~~P~lNvliN   84 (245)
T COG3967           5 GNTILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAENPEIHTEVCDVADRDSRRELVEWLKKEYPNLNVLIN   84 (245)
T ss_pred             CcEEEEeCCcchhhHHHHHHHHHhCCEEEEecCcHHHHHHHHhcCcchheeeecccchhhHHHHHHHHHhhCCchheeee
Confidence            458999999999999999999999999999999988766554332211133478888886665553       5699999


Q ss_pred             CCCCCCCCCCC-----hhhHHHHHHHhhhhHHHHHHHHHcC--CCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCChh-
Q 018503          123 LAGTPIGTRWS-----SEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-  194 (355)
Q Consensus       123 ~a~~~~~~~~~-----~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~~y-  194 (355)
                      |||.-...++.     .++...-.++|..++..|..+.-.+  +.....+|.+||+-.  |-+..         ..|.| 
T Consensus        85 NAGIqr~~dlt~~e~~~~~~~~eI~~Nl~API~Lt~~~lphl~~q~~a~IInVSSGLa--fvPm~---------~~PvYc  153 (245)
T COG3967          85 NAGIQRNEDLTGAEDLLDDAEQEIATNLLAPIRLTALLLPHLLRQPEATIINVSSGLA--FVPMA---------STPVYC  153 (245)
T ss_pred             cccccchhhccCCcchhhHHHHHHHHhhhhHHHHHHHHHHHHHhCCCceEEEeccccc--cCccc---------ccccch
Confidence            99985433322     3334556679999988887766442  134567999999866  43221         23456 


Q ss_pred             HHHHHHHHHHHHhcc---CCCCeEEEEEecEEEeC
Q 018503          195 LAEVCREWEGTALKV---NKDVRLALIRIGIVLGK  226 (355)
Q Consensus       195 ~~k~~~~~~~~~~~~---~~~~~~~i~Rp~~i~G~  226 (355)
                      ..|.........++.   ..++++.-+-|+.|-.+
T Consensus       154 aTKAaiHsyt~aLR~Qlk~t~veVIE~~PP~V~t~  188 (245)
T COG3967         154 ATKAAIHSYTLALREQLKDTSVEVIELAPPLVDTT  188 (245)
T ss_pred             hhHHHHHHHHHHHHHHhhhcceEEEEecCCceecC
Confidence            555444333322222   23688888888888764

>PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=99.28  E-value=8.2e-11  Score=100.84  Aligned_cols=188  Identities=12%  Similarity=0.026  Sum_probs=122.2

Q ss_pred             HHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcC----CCcEEEECCCCCCCCCCChhhHHHHH
Q 018503           66 LVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ----GSTAVVNLAGTPIGTRWSSEIKKEIK  141 (355)
Q Consensus        66 l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~----~~d~vi~~a~~~~~~~~~~~~~~~~~  141 (355)
                      ++++|+++|++|++++|+.+.... .      ....+|+.|.+++.++++    ++|++||+||...     .......+
T Consensus         1 ~a~~l~~~G~~Vv~~~r~~~~~~~-~------~~~~~Dl~~~~~v~~~~~~~~~~iD~li~nAG~~~-----~~~~~~~~   68 (241)
T PRK12428          1 TARLLRFLGARVIGVDRREPGMTL-D------GFIQADLGDPASIDAAVAALPGRIDALFNIAGVPG-----TAPVELVA   68 (241)
T ss_pred             ChHHHHhCCCEEEEEeCCcchhhh-h------HhhcccCCCHHHHHHHHHHhcCCCeEEEECCCCCC-----CCCHHHhh
Confidence            478899999999999998765321 0      144689999988887775    5899999999642     23467889


Q ss_pred             HHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCCCCcccc------------------CCCCCCChh-HHHHHHHH
Q 018503          142 ESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFD------------------ESSPSGNDY-LAEVCREW  202 (355)
Q Consensus       142 ~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~------------------e~~~~~~~y-~~k~~~~~  202 (355)
                      ++|+.++..+++++...-...+++|++||...  |+.....+..                  ...+....| .+|...+.
T Consensus        69 ~vN~~~~~~l~~~~~~~~~~~g~Iv~isS~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~  146 (241)
T PRK12428         69 RVNFLGLRHLTEALLPRMAPGGAIVNVASLAG--AEWPQRLELHKALAATASFDEGAAWLAAHPVALATGYQLSKEALIL  146 (241)
T ss_pred             hhchHHHHHHHHHHHHhccCCcEEEEeCcHHh--hccccchHHHHhhhccchHHHHHHhhhccCCCcccHHHHHHHHHHH
Confidence            99999999999988652112368999999887  6522111111                  112234568 78877666


Q ss_pred             HHHHhc----cCCCCeEEEEEecEEEeCCCCcccchHHHHHHHhCCCCCCCCcceecccHHHHHHHHHHHHhCC
Q 018503          203 EGTALK----VNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNP  272 (355)
Q Consensus       203 ~~~~~~----~~~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~  272 (355)
                      ..+.+.    ...|++++.++||.+.++........... .......    .....+...+|+|++++.++...
T Consensus       147 ~~~~la~~e~~~~girvn~v~PG~v~T~~~~~~~~~~~~-~~~~~~~----~~~~~~~~pe~va~~~~~l~s~~  215 (241)
T PRK12428        147 WTMRQAQPWFGARGIRVNCVAPGPVFTPILGDFRSMLGQ-ERVDSDA----KRMGRPATADEQAAVLVFLCSDA  215 (241)
T ss_pred             HHHHHHHHhhhccCeEEEEeecCCccCcccccchhhhhh-Hhhhhcc----cccCCCCCHHHHHHHHHHHcChh
Confidence            555444    34589999999999988743221110000 0000000    01123577899999999988653

>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases

Probab=99.24  E-value=2.3e-11  Score=98.10  Aligned_cols=145  Identities=21%  Similarity=0.146  Sum_probs=100.9

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhC-CCeEEEEecC--Cchhhcc----CCCCCCccCCCeeecCCcchhhhcC-------C
Q 018503           51 MTVSVTGATGFIGRRLVQRLQAD-NHQVRVLTRS--RSKAELI----FPGKKTRFFPGVMIAEEPQWRDCIQ-------G  116 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~-g~~V~~~~r~--~~~~~~~----~~~~~~~~~~~~d~~~~~~~~~~~~-------~  116 (355)
                      |+++||||+|-||+.++++|+++ ++.|+++.|+  .+....+    ...........+|+.+.+++.++++       .
T Consensus         1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   80 (167)
T PF00106_consen    1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVIKRFGP   80 (167)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHHHHHSS
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeeccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            47999999999999999999999 5688888988  2322222    1111111233478888877766553       6


Q ss_pred             CcEEEECCCCCCCC---CCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCCh
Q 018503          117 STAVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGND  193 (355)
Q Consensus       117 ~d~vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~~  193 (355)
                      +|++|||+|.....   ....+.....+++|+.+...+.+++..  .+.+++|++||...  .-         ..+....
T Consensus        81 ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~--~~~g~iv~~sS~~~--~~---------~~~~~~~  147 (167)
T PF00106_consen   81 LDILINNAGIFSDGSLDDLSEEELERVFRVNLFGPFLLAKALLP--QGGGKIVNISSIAG--VR---------GSPGMSA  147 (167)
T ss_dssp             ESEEEEECSCTTSBSGGGSHHHHHHHHHHHHTHHHHHHHHHHHH--HTTEEEEEEEEGGG--TS---------SSTTBHH
T ss_pred             ccccccccccccccccccccchhhhhccccccceeeeeeehhee--ccccceEEecchhh--cc---------CCCCChh
Confidence            79999999986432   223466678999999999999988877  56778999999765  21         1233456


Q ss_pred             h-HHHHHHHHHHHHhc
Q 018503          194 Y-LAEVCREWEGTALK  208 (355)
Q Consensus       194 y-~~k~~~~~~~~~~~  208 (355)
                      | .+|...+.+.+.++
T Consensus       148 Y~askaal~~~~~~la  163 (167)
T PF00106_consen  148 YSASKAALRGLTQSLA  163 (167)
T ss_dssp             HHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHH
Confidence            7 77766666555443

As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....

>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]

Probab=99.22  E-value=8.9e-10  Score=95.17  Aligned_cols=221  Identities=15%  Similarity=0.067  Sum_probs=136.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCC----C---CCccCCCeeecCCcchhhh--------
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG----K---KTRFFPGVMIAEEPQWRDC--------  113 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~----~---~~~~~~~~d~~~~~~~~~~--------  113 (355)
                      ..+.++||||+..||++++++|.+.|.+|++.+|+.+........    .   .......+|+.+.+..+++        
T Consensus         7 ~gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~~~~~   86 (270)
T KOG0725|consen    7 AGKVALVTGGSSGIGKAIALLLAKAGAKVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFAVEKF   86 (270)
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHHHHHh
Confidence            457899999999999999999999999999999998764332211    0   0011234677766554433        


Q ss_pred             cCCCcEEEECCCCCCC----CCCChhhHHHHHHHhhhh-HHHHHHHHHcC--CCCCCcEEEEeeeeeeeeCCCCCccccC
Q 018503          114 IQGSTAVVNLAGTPIG----TRWSSEIKKEIKESRIRV-TSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDE  186 (355)
Q Consensus       114 ~~~~d~vi~~a~~~~~----~~~~~~~~~~~~~~n~~~-~~~l~~a~~~~--~~~~~~~v~~Ss~~~~~yg~~~~~~~~e  186 (355)
                      +.++|++|++||....    .+.+.+.+..++++|+.+ ...+..++..+  +.+...++++||...  +...       
T Consensus        87 ~GkidiLvnnag~~~~~~~~~~~s~e~~d~~~~~Nl~G~~~~~~~~a~~~~~~~~gg~I~~~ss~~~--~~~~-------  157 (270)
T KOG0725|consen   87 FGKIDILVNNAGALGLTGSILDLSEEVFDKIMATNLRGSAFCLKQAARPMLKKSKGGSIVNISSVAG--VGPG-------  157 (270)
T ss_pred             CCCCCEEEEcCCcCCCCCChhhCCHHHHHHHHhhhchhHHHHHHHHHHHHHHhcCCceEEEEecccc--ccCC-------
Confidence            3468999999997532    455678888999999995 55555555443  134556777777654  2210       


Q ss_pred             CCCCC-Chh-HHHHHHHHHHHHhcc---CCCCeEEEEEecEEEeCCCC-cc-cchHHHHHHH--hCCCCCCCCcceeccc
Q 018503          187 SSPSG-NDY-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGG-AL-AKMIPLFMMF--AGGPLGSGQQWFSWIH  257 (355)
Q Consensus       187 ~~~~~-~~y-~~k~~~~~~~~~~~~---~~~~~~~i~Rp~~i~G~~~~-~~-~~~~~~~~~~--~~~~~~~~~~~~~~i~  257 (355)
                        +.. ..| .+|.....+......   .+|+++..+-||.+..+... .. ......+...  ....+.    .-.+..
T Consensus       158 --~~~~~~Y~~sK~al~~ltr~lA~El~~~gIRvN~v~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~p----~gr~g~  231 (270)
T KOG0725|consen  158 --PGSGVAYGVSKAALLQLTRSLAKELAKHGIRVNSVSPGLVKTSLRAAGLDDGEMEEFKEATDSKGAVP----LGRVGT  231 (270)
T ss_pred             --CCCcccchhHHHHHHHHHHHHHHHHhhcCcEEEEeecCcEeCCccccccccchhhHHhhhhccccccc----cCCccC
Confidence              111 456 666555444443332   25899999999999887511 10 0001111110  011111    113678


Q ss_pred             HHHHHHHHHHHHhCCC---CCCceEecCCC
Q 018503          258 LDDIVNLIYEALSNPS---YRGVINGTAPN  284 (355)
Q Consensus       258 v~Dva~~~~~~~~~~~---~~~~~~i~~~~  284 (355)
                      .+|++..+..++....   .+..+.+.++.
T Consensus       232 ~~eva~~~~fla~~~asyitG~~i~vdgG~  261 (270)
T KOG0725|consen  232 PEEVAEAAAFLASDDASYITGQTIIVDGGF  261 (270)
T ss_pred             HHHHHHhHHhhcCcccccccCCEEEEeCCE
Confidence            8999999999988753   23344444443

>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.21  E-value=1.4e-10  Score=92.41  Aligned_cols=164  Identities=14%  Similarity=0.027  Sum_probs=112.2

Q ss_pred             CCEEEEEc-CCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcC--------CCcEE
Q 018503           50 QMTVSVTG-ATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ--------GSTAV  120 (355)
Q Consensus        50 ~~~IlVtG-atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--------~~d~v  120 (355)
                      .++||||| +.|.||.+|++.+.++|+.|++..|+.+.-..+...... ...++|+.+++++.....        +.|++
T Consensus         7 ~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~~L~~~~gl-~~~kLDV~~~~~V~~v~~evr~~~~Gkld~L   85 (289)
T KOG1209|consen    7 PKKVLITGCSSGGIGYALAKEFARNGYLVYATARRLEPMAQLAIQFGL-KPYKLDVSKPEEVVTVSGEVRANPDGKLDLL   85 (289)
T ss_pred             CCeEEEeecCCcchhHHHHHHHHhCCeEEEEEccccchHhhHHHhhCC-eeEEeccCChHHHHHHHHHHhhCCCCceEEE
Confidence            46899986 468999999999999999999999998876655422110 133578888887765442        47999


Q ss_pred             EECCCCCCC---CCCChhhHHHHHHHhhhhHHHHHHHHHcC-CCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCChh-H
Q 018503          121 VNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES-PEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-L  195 (355)
Q Consensus       121 i~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~~y-~  195 (355)
                      ||+||..-.   -+.....-+..+++|+.|..++.+++... -.....+|++.|..+  |-+         .|....| .
T Consensus        86 ~NNAG~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~likaKGtIVnvgSl~~--~vp---------fpf~~iYsA  154 (289)
T KOG1209|consen   86 YNNAGQSCTFPALDATIAAVEQCFKVNVFGHIRMCRALSHFLIKAKGTIVNVGSLAG--VVP---------FPFGSIYSA  154 (289)
T ss_pred             EcCCCCCcccccccCCHHHHHhhhccceeeeehHHHHHHHHHHHccceEEEecceeE--Eec---------cchhhhhhH
Confidence            999997422   23344556789999999998888887652 123457999999877  431         1223456 6


Q ss_pred             HHHHHHHHHHHhcc---CCCCeEEEEEecEEEe
Q 018503          196 AEVCREWEGTALKV---NKDVRLALIRIGIVLG  225 (355)
Q Consensus       196 ~k~~~~~~~~~~~~---~~~~~~~i~Rp~~i~G  225 (355)
                      +|........-++.   .+|++++.+-+|.|-.
T Consensus       155 sKAAihay~~tLrlEl~PFgv~Vin~itGGv~T  187 (289)
T KOG1209|consen  155 SKAAIHAYARTLRLELKPFGVRVINAITGGVAT  187 (289)
T ss_pred             HHHHHHHhhhhcEEeeeccccEEEEecccceec
Confidence            66554444443333   2477777777776654

>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.20  E-value=6e-09  Score=91.67  Aligned_cols=218  Identities=9%  Similarity=-0.021  Sum_probs=126.3

Q ss_pred             CCCEEEEEcCC--chHHHHHHHHHHhCCCeEEEEecCC---------chhhccC----CCCC-----CccCCCeeecCCc
Q 018503           49 SQMTVSVTGAT--GFIGRRLVQRLQADNHQVRVLTRSR---------SKAELIF----PGKK-----TRFFPGVMIAEEP  108 (355)
Q Consensus        49 ~~~~IlVtGat--G~iG~~l~~~L~~~g~~V~~~~r~~---------~~~~~~~----~~~~-----~~~~~~~d~~~~~  108 (355)
                      ++++++||||+  ..||+++++.|.++|++|++.++.+         +......    ....     .......|+.+.+
T Consensus         7 ~gk~alITGa~~~~GIG~a~A~~la~~Ga~Vvv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~~~~~   86 (299)
T PRK06300          7 TGKIAFIAGIGDDQGYGWGIAKALAEAGATILVGTWVPIYKIFSQSLELGKFDASRKLSNGSLLTFAKIYPMDASFDTPE   86 (299)
T ss_pred             CCCEEEEeCCCCCCCHHHHHHHHHHHCCCEEEEEeccchhhhhhhhcccccccccccccccchhhhhhHHHhhhhcCCCE
Confidence            45789999995  8999999999999999999876531         1110000    0000     0000012333332


Q ss_pred             ------------------chhhhc-------CCCcEEEECCCCCC---C--CCCChhhHHHHHHHhhhhHHHHHHHHHcC
Q 018503          109 ------------------QWRDCI-------QGSTAVVNLAGTPI---G--TRWSSEIKKEIKESRIRVTSKVVDLINES  158 (355)
Q Consensus       109 ------------------~~~~~~-------~~~d~vi~~a~~~~---~--~~~~~~~~~~~~~~n~~~~~~l~~a~~~~  158 (355)
                                        ++.+++       .++|++|||||...   .  ...+.+.+...+++|+.+...+++++...
T Consensus        87 ~v~~~i~~~~~~~~~~~~si~~~~~~v~~~~G~lDvLVnNAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~l~~a~~p~  166 (299)
T PRK06300         87 DVPEEIRENKRYKDLSGYTISEVAEQVKKDFGHIDILVHSLANSPEISKPLLETSRKGYLAALSTSSYSFVSLLSHFGPI  166 (299)
T ss_pred             EeecccCccccccCCCHHHHHHHHHHHHHHcCCCcEEEECCCcCcccCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence                              233333       36899999997531   1  23456777889999999999998877652


Q ss_pred             CCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCC-hh-HHHHHHHHHHHHhcc----CCCCeEEEEEecEEEeCCCCccc
Q 018503          159 PEGVRPSVLVSATALGYYGTSETEVFDESSPSGN-DY-LAEVCREWEGTALKV----NKDVRLALIRIGIVLGKDGGALA  232 (355)
Q Consensus       159 ~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~-~y-~~k~~~~~~~~~~~~----~~~~~~~i~Rp~~i~G~~~~~~~  232 (355)
                      -....++|++||...  .-.         .+... .| .+|.....+.+.+..    .+|+++..|.||.+..+......
T Consensus       167 m~~~G~ii~iss~~~--~~~---------~p~~~~~Y~asKaAl~~lt~~la~el~~~~gIrVn~V~PG~v~T~~~~~~~  235 (299)
T PRK06300        167 MNPGGSTISLTYLAS--MRA---------VPGYGGGMSSAKAALESDTKVLAWEAGRRWGIRVNTISAGPLASRAGKAIG  235 (299)
T ss_pred             hhcCCeEEEEeehhh--cCc---------CCCccHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEEeCCccChhhhccc
Confidence            112357888887554  110         11122 57 777666555444333    24899999999988765321110


Q ss_pred             chHHHHHH-HhCCCCCCCCcceecccHHHHHHHHHHHHhCCC---CCCceEecCC
Q 018503          233 KMIPLFMM-FAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPS---YRGVINGTAP  283 (355)
Q Consensus       233 ~~~~~~~~-~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~---~~~~~~i~~~  283 (355)
                      ..-..... ....+.      -.+...+|+|+++++++....   .+..+.+.++
T Consensus       236 ~~~~~~~~~~~~~p~------~r~~~peevA~~v~~L~s~~~~~itG~~i~vdGG  284 (299)
T PRK06300        236 FIERMVDYYQDWAPL------PEPMEAEQVGAAAAFLVSPLASAITGETLYVDHG  284 (299)
T ss_pred             ccHHHHHHHHhcCCC------CCCcCHHHHHHHHHHHhCccccCCCCCEEEECCC
Confidence            00011111 111111      125678999999999987543   3335555544

>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B

Probab=99.19  E-value=2.2e-11  Score=104.39  Aligned_cols=209  Identities=16%  Similarity=0.110  Sum_probs=131.7

Q ss_pred             cCC--chHHHHHHHHHHhCCCeEEEEecCCchh----hccCCCCCCccCCCeeecCCcchhhhc--------CCCcEEEE
Q 018503           57 GAT--GFIGRRLVQRLQADNHQVRVLTRSRSKA----ELIFPGKKTRFFPGVMIAEEPQWRDCI--------QGSTAVVN  122 (355)
Q Consensus        57 Gat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~----~~~~~~~~~~~~~~~d~~~~~~~~~~~--------~~~d~vi~  122 (355)
                      |++  +.||+++++.|+++|++|++++|+.++.    ..+....... ...+|+.+++++.+++        ..+|++||
T Consensus         1 g~~~s~GiG~aia~~l~~~Ga~V~~~~~~~~~~~~~~~~l~~~~~~~-~~~~D~~~~~~v~~~~~~~~~~~~g~iD~lV~   79 (241)
T PF13561_consen    1 GAGSSSGIGRAIARALAEEGANVILTDRNEEKLADALEELAKEYGAE-VIQCDLSDEESVEALFDEAVERFGGRIDILVN   79 (241)
T ss_dssp             STSSTSHHHHHHHHHHHHTTEEEEEEESSHHHHHHHHHHHHHHTTSE-EEESCTTSHHHHHHHHHHHHHHHCSSESEEEE
T ss_pred             CCCCCCChHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHcCCc-eEeecCcchHHHHHHHHHHHhhcCCCeEEEEe
Confidence            566  9999999999999999999999998862    2222111111 3457888888776653        46899999


Q ss_pred             CCCCCCC----C---CCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCChh-
Q 018503          123 LAGTPIG----T---RWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-  194 (355)
Q Consensus       123 ~a~~~~~----~---~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~~y-  194 (355)
                      +++....    .   +...+.+...+++|+.+...+++++...-.....+|++||...  ...         .+....| 
T Consensus        80 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsii~iss~~~--~~~---------~~~~~~y~  148 (241)
T PF13561_consen   80 NAGISPPSNVEKPLLDLSEEDWDKTFDINVFSPFLLAQAALPLMKKGGSIINISSIAA--QRP---------MPGYSAYS  148 (241)
T ss_dssp             EEESCTGGGTSSSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHEEEEEEEEEGGG--TSB---------STTTHHHH
T ss_pred             cccccccccCCCChHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccccchhh--ccc---------CccchhhH
Confidence            9987532    1   2234567788899999988888877442112367999988754  111         1223356 


Q ss_pred             HHHHHHHHHHHH----hccCCCCeEEEEEecEEEeCCCCcccchHHHH-HHHhCCCCCCCCcceecccHHHHHHHHHHHH
Q 018503          195 LAEVCREWEGTA----LKVNKDVRLALIRIGIVLGKDGGALAKMIPLF-MMFAGGPLGSGQQWFSWIHLDDIVNLIYEAL  269 (355)
Q Consensus       195 ~~k~~~~~~~~~----~~~~~~~~~~i~Rp~~i~G~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~  269 (355)
                      .+|...+.+...    +...+|+++..|.||.+..+........-... ......|++      .+...+|+|++++.++
T Consensus       149 ~sKaal~~l~r~lA~el~~~~gIrVN~V~pG~i~t~~~~~~~~~~~~~~~~~~~~pl~------r~~~~~evA~~v~fL~  222 (241)
T PF13561_consen  149 ASKAALEGLTRSLAKELAPKKGIRVNAVSPGPIETPMTERIPGNEEFLEELKKRIPLG------RLGTPEEVANAVLFLA  222 (241)
T ss_dssp             HHHHHHHHHHHHHHHHHGGHGTEEEEEEEESSBSSHHHHHHHTHHHHHHHHHHHSTTS------SHBEHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhccccCeeeeeecccceeccchhccccccchhhhhhhhhccC------CCcCHHHHHHHHHHHh
Confidence            666555444333    33325899999999988865311110001111 112222222      2678999999999999


Q ss_pred             hCCC--CCC-ceEecCC
Q 018503          270 SNPS--YRG-VINGTAP  283 (355)
Q Consensus       270 ~~~~--~~~-~~~i~~~  283 (355)
                      ....  ..| .+.+.+|
T Consensus       223 s~~a~~itG~~i~vDGG  239 (241)
T PF13561_consen  223 SDAASYITGQVIPVDGG  239 (241)
T ss_dssp             SGGGTTGTSEEEEESTT
T ss_pred             CccccCccCCeEEECCC
Confidence            8653  334 5555554

...

>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.19  E-value=1.2e-10  Score=102.11  Aligned_cols=214  Identities=16%  Similarity=0.061  Sum_probs=131.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCC----CCC--ccCCCeeecCCcchhhhcC-------
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG----KKT--RFFPGVMIAEEPQWRDCIQ-------  115 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~----~~~--~~~~~~d~~~~~~~~~~~~-------  115 (355)
                      ..+.++|||||..||.++++.|+++|.+|+...|+.+........    ...  .....+|+.+.+++.++.+       
T Consensus        34 ~~~~~vVTGansGIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~~i~~~~~~~~i~~~~lDLssl~SV~~fa~~~~~~~~  113 (314)
T KOG1208|consen   34 SGKVALVTGATSGIGFETARELALRGAHVVLACRNEERGEEAKEQIQKGKANQKIRVIQLDLSSLKSVRKFAEEFKKKEG  113 (314)
T ss_pred             CCcEEEEECCCCchHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCHHHHHHHHHHHHhcCC
Confidence            347899999999999999999999999999999998554332211    100  0124578888887765552       


Q ss_pred             CCcEEEECCCCCCCCC-CChhhHHHHHHHhhhhHHHHHHH----HHcCCCCCCcEEEEeeeeeeeeCCCCCccccCCC--
Q 018503          116 GSTAVVNLAGTPIGTR-WSSEIKKEIKESRIRVTSKVVDL----INESPEGVRPSVLVSATALGYYGTSETEVFDESS--  188 (355)
Q Consensus       116 ~~d~vi~~a~~~~~~~-~~~~~~~~~~~~n~~~~~~l~~a----~~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~--  188 (355)
                      ..|+.|++||+..... ...+..+..+.+|..|...|.+.    ++.  ....|+|++||... .....-+....+..  
T Consensus       114 ~ldvLInNAGV~~~~~~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~--s~~~RIV~vsS~~~-~~~~~~~~l~~~~~~~  190 (314)
T KOG1208|consen  114 PLDVLINNAGVMAPPFSLTKDGLELTFATNYLGHFLLTELLLPLLKR--SAPSRIVNVSSILG-GGKIDLKDLSGEKAKL  190 (314)
T ss_pred             CccEEEeCcccccCCcccCccchhheehhhhHHHHHHHHHHHHHHhh--CCCCCEEEEcCccc-cCccchhhccchhccC
Confidence            5799999999865433 34455678889999996666554    455  33379999999753 01111111111211  


Q ss_pred             -CCCChh-HHHHHHHHHHHHhccCC--CCeEEEEEecEEEeCCCCcccchHHHHHHHhCCCCCCCCcceecccHHHHHHH
Q 018503          189 -PSGNDY-LAEVCREWEGTALKVNK--DVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNL  264 (355)
Q Consensus       189 -~~~~~y-~~k~~~~~~~~~~~~~~--~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~  264 (355)
                       .....| .+|.........+.++.  |+....+.||.+..+.......+...+......++        +-..++-|+.
T Consensus       191 ~~~~~~Y~~SKla~~l~~~eL~k~l~~~V~~~~~hPG~v~t~~l~r~~~~~~~l~~~l~~~~--------~ks~~~ga~t  262 (314)
T KOG1208|consen  191 YSSDAAYALSKLANVLLANELAKRLKKGVTTYSVHPGVVKTTGLSRVNLLLRLLAKKLSWPL--------TKSPEQGAAT  262 (314)
T ss_pred             ccchhHHHHhHHHHHHHHHHHHHHhhcCceEEEECCCcccccceecchHHHHHHHHHHHHHh--------ccCHHHHhhh
Confidence             112246 66665544444333322  79999999999988743222222222211111100        1256777888


Q ss_pred             HHHHHhCCC
Q 018503          265 IYEALSNPS  273 (355)
Q Consensus       265 ~~~~~~~~~  273 (355)
                      ++.++..++
T Consensus       263 ~~~~a~~p~  271 (314)
T KOG1208|consen  263 TCYAALSPE  271 (314)
T ss_pred             eehhccCcc
Confidence            888887765

>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]

Probab=99.17  E-value=5.9e-10  Score=94.71  Aligned_cols=165  Identities=18%  Similarity=0.170  Sum_probs=117.9

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCC-CC-ccCCCeeecCCcchhhhcC---------CCc
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGK-KT-RFFPGVMIAEEPQWRDCIQ---------GST  118 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~-~~~~~~d~~~~~~~~~~~~---------~~d  118 (355)
                      .+-|||||.-...|+.++++|.++|+.|++-.-.++..+.+.... .. ......|++++++++++.+         +.-
T Consensus        29 ~k~VlITGCDSGfG~~LA~~L~~~Gf~V~Agcl~~~gae~L~~~~~s~rl~t~~LDVT~~esi~~a~~~V~~~l~~~gLw  108 (322)
T KOG1610|consen   29 DKAVLITGCDSGFGRLLAKKLDKKGFRVFAGCLTEEGAESLRGETKSPRLRTLQLDVTKPESVKEAAQWVKKHLGEDGLW  108 (322)
T ss_pred             CcEEEEecCCcHHHHHHHHHHHhcCCEEEEEeecCchHHHHhhhhcCCcceeEeeccCCHHHHHHHHHHHHHhcccccce
Confidence            357999999999999999999999999999997766655554332 10 0123589999998877663         457


Q ss_pred             EEEECCCCC---CCCCC-ChhhHHHHHHHhhhhHHHHHHHHHcC-CCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCCh
Q 018503          119 AVVNLAGTP---IGTRW-SSEIKKEIKESRIRVTSKVVDLINES-PEGVRPSVLVSATALGYYGTSETEVFDESSPSGND  193 (355)
Q Consensus       119 ~vi~~a~~~---~~~~~-~~~~~~~~~~~n~~~~~~l~~a~~~~-~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~~  193 (355)
                      .||||||..   ...+| ..++....+++|..|+..+..+.... +...+|+|++||...           .-..|..-+
T Consensus       109 glVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~arGRvVnvsS~~G-----------R~~~p~~g~  177 (322)
T KOG1610|consen  109 GLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRARGRVVNVSSVLG-----------RVALPALGP  177 (322)
T ss_pred             eEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhccCeEEEeccccc-----------CccCccccc
Confidence            899999953   23455 45777889999999977776655332 235679999999754           112233455


Q ss_pred             h-HHHHHHHHHHHHhccC---CCCeEEEEEecEEEeC
Q 018503          194 Y-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGK  226 (355)
Q Consensus       194 y-~~k~~~~~~~~~~~~~---~~~~~~i~Rp~~i~G~  226 (355)
                      | .+|...+......+.+   +|+++.++-|| ++-.
T Consensus       178 Y~~SK~aVeaf~D~lR~EL~~fGV~VsiiePG-~f~T  213 (322)
T KOG1610|consen  178 YCVSKFAVEAFSDSLRRELRPFGVKVSIIEPG-FFKT  213 (322)
T ss_pred             chhhHHHHHHHHHHHHHHHHhcCcEEEEeccC-cccc
Confidence            6 7777766666555443   59999999999 4433

>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

Probab=99.17  E-value=3.6e-10  Score=97.48  Aligned_cols=163  Identities=17%  Similarity=0.112  Sum_probs=110.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchh-----hccCCCC--CCccCCCeeecC-Ccchhhhc------
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKA-----ELIFPGK--KTRFFPGVMIAE-EPQWRDCI------  114 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-----~~~~~~~--~~~~~~~~d~~~-~~~~~~~~------  114 (355)
                      ++++|+||||++.||.++++.|++.|+.|+++.|.....     .......  .......+|+.+ .+++..++      
T Consensus         4 ~~~~ilITGas~GiG~aia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~~v~~~~~~~~~~   83 (251)
T COG1028           4 SGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIKEAGGGRAAAVAADVSDDEESVEALVAAAEEE   83 (251)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEcCCCchhhHHHHHHHHHhcCCCcEEEEEecCCCCHHHHHHHHHHHHHH
Confidence            457899999999999999999999999998888876531     1111100  011133468887 66665444      


Q ss_pred             -CCCcEEEECCCCCC----CCCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCCCCccccCCCC
Q 018503          115 -QGSTAVVNLAGTPI----GTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSP  189 (355)
Q Consensus       115 -~~~d~vi~~a~~~~----~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~  189 (355)
                       ..+|++||+||...    ......+..+..+++|+.+...+.+++....... ++|++||...  . ..         +
T Consensus        84 ~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~-~Iv~isS~~~--~-~~---------~  150 (251)
T COG1028          84 FGRIDILVNNAGIAGPDAPLEELTEEDWDRVIDVNLLGAFLLTRAALPLMKKQ-RIVNISSVAG--L-GG---------P  150 (251)
T ss_pred             cCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHhhhhC-eEEEECCchh--c-CC---------C
Confidence             34899999999742    2334456778999999999888888554421111 8999998765  2 11         1


Q ss_pred             C-CChh-HHHHHHHHHHHHhcc---CCCCeEEEEEecEEE
Q 018503          190 S-GNDY-LAEVCREWEGTALKV---NKDVRLALIRIGIVL  224 (355)
Q Consensus       190 ~-~~~y-~~k~~~~~~~~~~~~---~~~~~~~i~Rp~~i~  224 (355)
                      . ...| .+|.....+.+.+..   ..|+.+..+.||.+-
T Consensus       151 ~~~~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~v~PG~~~  190 (251)
T COG1028         151 PGQAAYAASKAALIGLTKALALELAPRGIRVNAVAPGYID  190 (251)
T ss_pred             CCcchHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEeccCC
Confidence            1 3567 778766665555543   358999999999444

>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.13  E-value=1e-09  Score=93.10  Aligned_cols=204  Identities=16%  Similarity=0.111  Sum_probs=131.2

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCc------cCCCeeecCCcchhhhcC-------CC
Q 018503           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTR------FFPGVMIAEEPQWRDCIQ-------GS  117 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~------~~~~~d~~~~~~~~~~~~-------~~  117 (355)
                      .+|+|||++..+|..++..+..+|++|+++.|+..+..+........      .+..+|+.|.+++...++       .+
T Consensus        34 ~hi~itggS~glgl~la~e~~~~ga~Vti~ar~~~kl~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v~~~~~~l~~~~~~~  113 (331)
T KOG1210|consen   34 RHILITGGSSGLGLALALECKREGADVTITARSGKKLLEAKAELELLTQVEDVSYKSVDVIDYDSVSKVIEELRDLEGPI  113 (331)
T ss_pred             ceEEEecCcchhhHHHHHHHHHccCceEEEeccHHHHHHHHhhhhhhhccceeeEeccccccHHHHHHHHhhhhhccCCc
Confidence            38999999999999999999999999999999988765443321110      122367777777766553       46


Q ss_pred             cEEEECCCCCCC---CCCChhhHHHHHHHhhhhHHHHHHHHHcC---CCCCCcEEEEeeeeeeeeCCCCCccccCCCCCC
Q 018503          118 TAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES---PEGVRPSVLVSATALGYYGTSETEVFDESSPSG  191 (355)
Q Consensus       118 d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~~~~---~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~  191 (355)
                      |.+|+|||....   .+.+....+..+++|..++.+++.++...   +.+..+++++||..+. +|-.          -.
T Consensus       114 d~l~~cAG~~v~g~f~~~s~~~v~~~m~vNylgt~~v~~~~~~~mk~~~~~g~I~~vsS~~a~-~~i~----------Gy  182 (331)
T KOG1210|consen  114 DNLFCCAGVAVPGLFEDLSPEVVEKLMDVNYLGTVNVAKAAARAMKKREHLGRIILVSSQLAM-LGIY----------GY  182 (331)
T ss_pred             ceEEEecCcccccccccCCHHHHHHHHHhhhhhhHHHHHHHHHHhhccccCcEEEEehhhhhh-cCcc----------cc
Confidence            999999998644   34455666788899999999998876442   1234488888886652 3311          01


Q ss_pred             Chh-HHHHHHHHHHHHhcc---CCCCeEEEEEecEEEeCCCCcccchHHHH-HHHhCCCCCCCCcceecccHHHHHHHHH
Q 018503          192 NDY-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALAKMIPLF-MMFAGGPLGSGQQWFSWIHLDDIVNLIY  266 (355)
Q Consensus       192 ~~y-~~k~~~~~~~~~~~~---~~~~~~~i~Rp~~i~G~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~v~Dva~~~~  266 (355)
                      ..| .+|.....+.+..+.   .+++.++..-|+.+-.|+-..-+...|.. ++.        +..-+.+..+++|++++
T Consensus       183 saYs~sK~alrgLa~~l~qE~i~~~v~Vt~~~P~~~~tpGfE~En~tkP~~t~ii--------~g~ss~~~~e~~a~~~~  254 (331)
T KOG1210|consen  183 SAYSPSKFALRGLAEALRQELIKYGVHVTLYYPPDTLTPGFERENKTKPEETKII--------EGGSSVIKCEEMAKAIV  254 (331)
T ss_pred             cccccHHHHHHHHHHHHHHHHhhcceEEEEEcCCCCCCCccccccccCchheeee--------cCCCCCcCHHHHHHHHH
Confidence            223 334333333332222   24788888888888777532211222211 111        11124588999999999


Q ss_pred             HHHhCCC
Q 018503          267 EALSNPS  273 (355)
Q Consensus       267 ~~~~~~~  273 (355)
                      .=+.+.+
T Consensus       255 ~~~~rg~  261 (331)
T KOG1210|consen  255 KGMKRGN  261 (331)
T ss_pred             hHHhhcC
Confidence            9887653

>PTZ00325 malate dehydrogenase; Provisional

Probab=99.10  E-value=1.7e-09  Score=95.26  Aligned_cols=175  Identities=13%  Similarity=0.137  Sum_probs=109.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCC--CeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcCCCcEEEECCCC
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADN--HQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT  126 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~  126 (355)
                      +++||+|+|++|.+|+.++..|..++  .++..+++.......+.-..........+..|+.++.+.++++|+||+++|.
T Consensus         7 ~~~KI~IiGaaG~VGs~~a~~l~~~~~~~elvL~Di~~~~g~a~Dl~~~~~~~~v~~~td~~~~~~~l~gaDvVVitaG~   86 (321)
T PTZ00325          7 KMFKVAVLGAAGGIGQPLSLLLKQNPHVSELSLYDIVGAPGVAADLSHIDTPAKVTGYADGELWEKALRGADLVLICAGV   86 (321)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEecCCCcccccchhhcCcCceEEEecCCCchHHHhCCCCEEEECCCC
Confidence            44699999999999999999998655  6899999933222211100000001112344556667889999999999997


Q ss_pred             CCCCCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCCCCccccCC--CCCCChh-HHHHHHHHH
Q 018503          127 PIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDES--SPSGNDY-LAEVCREWE  203 (355)
Q Consensus       127 ~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~--~~~~~~y-~~k~~~~~~  203 (355)
                      +..   ......+.+..|+..++++++++++  .+.+++|+++|-.+..+..-......+.  .|+...| .+-+-...+
T Consensus        87 ~~~---~~~tR~dll~~N~~i~~~i~~~i~~--~~~~~iviv~SNPvdv~~~~~~~~~~~~sg~p~~~viG~g~LDs~R~  161 (321)
T PTZ00325         87 PRK---PGMTRDDLFNTNAPIVRDLVAAVAS--SAPKAIVGIVSNPVNSTVPIAAETLKKAGVYDPRKLFGVTTLDVVRA  161 (321)
T ss_pred             CCC---CCCCHHHHHHHHHHHHHHHHHHHHH--HCCCeEEEEecCcHHHHHHHHHhhhhhccCCChhheeechhHHHHHH
Confidence            522   2234568889999999999999999  7899999999976521110000000111  2233333 222333334


Q ss_pred             HHHhccCCCCeEEEEEecEEEeCCCC
Q 018503          204 GTALKVNKDVRLALIRIGIVLGKDGG  229 (355)
Q Consensus       204 ~~~~~~~~~~~~~i~Rp~~i~G~~~~  229 (355)
                      ........+++...++ +.|+|....
T Consensus       162 r~~la~~l~v~~~~V~-~~VlGeHGd  186 (321)
T PTZ00325        162 RKFVAEALGMNPYDVN-VPVVGGHSG  186 (321)
T ss_pred             HHHHHHHhCcChhheE-EEEEeecCC
Confidence            4444444577777787 888887654

>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.05  E-value=2.3e-09  Score=87.40  Aligned_cols=157  Identities=15%  Similarity=0.163  Sum_probs=100.8

Q ss_pred             EEEEEcCCchHHHHHHHHHHhCC-CeEEEEecCCc-hhh------ccCCCCCCccCCCeeecCCcchhhhcC-------C
Q 018503           52 TVSVTGATGFIGRRLVQRLQADN-HQVRVLTRSRS-KAE------LIFPGKKTRFFPGVMIAEEPQWRDCIQ-------G  116 (355)
Q Consensus        52 ~IlVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~-~~~------~~~~~~~~~~~~~~d~~~~~~~~~~~~-------~  116 (355)
                      +++||||+|.+|..+++.|.+++ .+|+.+.|+.. ...      .+........+..+|+.|++++.++++       .
T Consensus         2 tylitGG~gglg~~la~~La~~~~~~~il~~r~~~~~~~~~~~i~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~~~~~~~~   81 (181)
T PF08659_consen    2 TYLITGGLGGLGQSLARWLAERGARRLILLGRSGAPSAEAEAAIRELESAGARVEYVQCDVTDPEAVAAALAQLRQRFGP   81 (181)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTT-SEEEEEESSGGGSTTHHHHHHHHHHTT-EEEEEE--TTSHHHHHHHHHTSHTTSS-
T ss_pred             EEEEECCccHHHHHHHHHHHHcCCCEEEEeccCCCccHHHHHHHHHHHhCCCceeeeccCccCHHHHHHHHHHHHhccCC
Confidence            58999999999999999999997 58999999932 111      111111112244678889998887774       4


Q ss_pred             CcEEEECCCCCCC---CCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCCh
Q 018503          117 STAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGND  193 (355)
Q Consensus       117 ~d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~~  193 (355)
                      ++.|||+|+....   ...+.+.....+..-+.++.+|.+++..  .....+|++||.+.. +|..          -...
T Consensus        82 i~gVih~ag~~~~~~~~~~t~~~~~~~~~~Kv~g~~~L~~~~~~--~~l~~~i~~SSis~~-~G~~----------gq~~  148 (181)
T PF08659_consen   82 IDGVIHAAGVLADAPIQDQTPDEFDAVLAPKVRGLWNLHEALEN--RPLDFFILFSSISSL-LGGP----------GQSA  148 (181)
T ss_dssp             EEEEEE-------B-GCC--HHHHHHHHHHHHHHHHHHHHHHTT--TTTSEEEEEEEHHHH-TT-T----------TBHH
T ss_pred             cceeeeeeeeecccccccCCHHHHHHHHhhhhhHHHHHHHHhhc--CCCCeEEEECChhHh-ccCc----------chHh
Confidence            5889999998543   2334555677788889999999999988  688899999997753 5532          1234


Q ss_pred             h-HHHHHHHHHHHHhccCCCCeEEEEEecE
Q 018503          194 Y-LAEVCREWEGTALKVNKDVRLALIRIGI  222 (355)
Q Consensus       194 y-~~k~~~~~~~~~~~~~~~~~~~i~Rp~~  222 (355)
                      | ......+........ .|.+++.+.-+.
T Consensus       149 YaaAN~~lda~a~~~~~-~g~~~~sI~wg~  177 (181)
T PF08659_consen  149 YAAANAFLDALARQRRS-RGLPAVSINWGA  177 (181)
T ss_dssp             HHHHHHHHHHHHHHHHH-TTSEEEEEEE-E
T ss_pred             HHHHHHHHHHHHHHHHh-CCCCEEEEEccc
Confidence            6 445445555554443 488888877553

It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....

>KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only]

Probab=99.01  E-value=5e-09  Score=84.73  Aligned_cols=210  Identities=15%  Similarity=0.078  Sum_probs=131.2

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCC-----CCccCCCeeecCCcchhhhcC-------CC
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGK-----KTRFFPGVMIAEEPQWRDCIQ-------GS  117 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~d~~~~~~~~~~~~-------~~  117 (355)
                      ++++++||+.|.||+.+.++|+++|..+.++..+.++........     ....+..+|+.+..+++++++       .+
T Consensus         5 GKna~vtggagGIGl~~sk~Ll~kgik~~~i~~~~En~~a~akL~ai~p~~~v~F~~~DVt~~~~~~~~f~ki~~~fg~i   84 (261)
T KOG4169|consen    5 GKNALVTGGAGGIGLATSKALLEKGIKVLVIDDSEENPEAIAKLQAINPSVSVIFIKCDVTNRGDLEAAFDKILATFGTI   84 (261)
T ss_pred             CceEEEecCCchhhHHHHHHHHHcCchheeehhhhhCHHHHHHHhccCCCceEEEEEeccccHHHHHHHHHHHHHHhCce
Confidence            578999999999999999999999999999888877654332111     111245678888877777664       57


Q ss_pred             cEEEECCCCCCCCCCChhhHHHHHHHhhhh----HHHHHHHHHcCC-CCCCcEEEEeeeeeeeeCCCCCccccCCCCCCC
Q 018503          118 TAVVNLAGTPIGTRWSSEIKKEIKESRIRV----TSKVVDLINESP-EGVRPSVLVSATALGYYGTSETEVFDESSPSGN  192 (355)
Q Consensus       118 d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~----~~~l~~a~~~~~-~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~  192 (355)
                      |++||.||..     ...+++..+.+|+.+    +...+.+..+.. ....-+|..||...  .         +..|..|
T Consensus        85 DIlINgAGi~-----~dkd~e~Ti~vNLtgvin~T~~alpyMdk~~gG~GGiIvNmsSv~G--L---------~P~p~~p  148 (261)
T KOG4169|consen   85 DILINGAGIL-----DDKDWERTINVNLTGVINGTQLALPYMDKKQGGKGGIIVNMSSVAG--L---------DPMPVFP  148 (261)
T ss_pred             EEEEcccccc-----cchhHHHhhccchhhhhhhhhhhhhhhhhhcCCCCcEEEEeccccc--c---------Cccccch
Confidence            9999999974     355567778888776    444556665521 12334778887643  1         1123345


Q ss_pred             hh-HHHHH-----HHHHHHHhccCCCCeEEEEEecEEEeCCC------CcccchHHHH-HHHhCCCCCCCCcceecccHH
Q 018503          193 DY-LAEVC-----REWEGTALKVNKDVRLALIRIGIVLGKDG------GALAKMIPLF-MMFAGGPLGSGQQWFSWIHLD  259 (355)
Q Consensus       193 ~y-~~k~~-----~~~~~~~~~~~~~~~~~i~Rp~~i~G~~~------~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~v~  259 (355)
                      .| .+|..     +-.-...+..+.|+.+..++||..--.-.      +.+-..-+.+ ...+         ...--...
T Consensus       149 VY~AsKaGVvgFTRSla~~ayy~~sGV~~~avCPG~t~t~l~~~~~~~~~~~e~~~~~~~~l~---------~~~~q~~~  219 (261)
T KOG4169|consen  149 VYAASKAGVVGFTRSLADLAYYQRSGVRFNAVCPGFTRTDLAENIDASGGYLEYSDSIKEALE---------RAPKQSPA  219 (261)
T ss_pred             hhhhcccceeeeehhhhhhhhHhhcCEEEEEECCCcchHHHHHHHHhcCCcccccHHHHHHHH---------HcccCCHH
Confidence            55 44421     11122233334699999999997543210      1110111111 1111         11235668


Q ss_pred             HHHHHHHHHHhCCCCCCceEecCCC
Q 018503          260 DIVNLIYEALSNPSYRGVINGTAPN  284 (355)
Q Consensus       260 Dva~~~~~~~~~~~~~~~~~i~~~~  284 (355)
                      +++..++.+++.+..+.+|-+..+.
T Consensus       220 ~~a~~~v~aiE~~~NGaiw~v~~g~  244 (261)
T KOG4169|consen  220 CCAINIVNAIEYPKNGAIWKVDSGS  244 (261)
T ss_pred             HHHHHHHHHHhhccCCcEEEEecCc
Confidence            8999999999997766688887764

>KOG1611 consensus Predicted short chain-type dehydrogenase [General function prediction only]

Probab=98.99  E-value=2.9e-08  Score=80.40  Aligned_cols=202  Identities=18%  Similarity=0.219  Sum_probs=119.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhC-CCeEEEE-ecCCchhhccCCCC---CCc-cCCCeeecCCcchhhhc--------
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQAD-NHQVRVL-TRSRSKAELIFPGK---KTR-FFPGVMIAEEPQWRDCI--------  114 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~-g~~V~~~-~r~~~~~~~~~~~~---~~~-~~~~~d~~~~~~~~~~~--------  114 (355)
                      +++.|+||||+..||--|+++|++. |.++++. .|+++.........   ... -...+|+.+.+++++++        
T Consensus         2 spksv~ItGaNRGIGlgLVk~llk~~~i~~iiat~r~~e~a~~~l~~k~~~d~rvHii~Ldvt~deS~~~~~~~V~~iVg   81 (249)
T KOG1611|consen    2 SPKSVFITGANRGIGLGLVKELLKDKGIEVIIATARDPEKAATELALKSKSDSRVHIIQLDVTCDESIDNFVQEVEKIVG   81 (249)
T ss_pred             CCccEEEeccCcchhHHHHHHHhcCCCcEEEEEecCChHHhhHHHHHhhccCCceEEEEEecccHHHHHHHHHHHHhhcc
Confidence            3467999999999999999999985 7666554 45566632221110   000 02246777666665544        


Q ss_pred             -CCCcEEEECCCCCCC----CCCChhhHHHHHHHhhhhHHHHHHHH----HcCC---------CCCCcEEEEeeeeeeee
Q 018503          115 -QGSTAVVNLAGTPIG----TRWSSEIKKEIKESRIRVTSKVVDLI----NESP---------EGVRPSVLVSATALGYY  176 (355)
Q Consensus       115 -~~~d~vi~~a~~~~~----~~~~~~~~~~~~~~n~~~~~~l~~a~----~~~~---------~~~~~~v~~Ss~~~~~y  176 (355)
                       .+.|.+|++||....    ...........+++|..++..+.+++    ++.+         .+...+|++||.+.. .
T Consensus        82 ~~GlnlLinNaGi~~~y~~~~~~~r~~~~~~~~tN~v~~il~~Q~~lPLLkkaas~~~gd~~s~~raaIinisS~~~s-~  160 (249)
T KOG1611|consen   82 SDGLNLLINNAGIALSYNTVLKPSRAVLLEQYETNAVGPILLTQAFLPLLKKAASKVSGDGLSVSRAAIINISSSAGS-I  160 (249)
T ss_pred             cCCceEEEeccceeeecccccCCcHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcccCCcccccceeEEEeeccccc-c
Confidence             367999999998533    12233446778899999866665543    3310         112268889987652 1


Q ss_pred             CCCCCccccCCCCCCChh-HHHHHHHHHHHHhcc---CCCCeEEEEEecEEEeCCCCcccchHHHHHHHhCCCCCCCCcc
Q 018503          177 GTSETEVFDESSPSGNDY-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQW  252 (355)
Q Consensus       177 g~~~~~~~~e~~~~~~~y-~~k~~~~~~~~~~~~---~~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (355)
                      +.    .   .......| .+|.......+....   ..++-++.+.||+|--...+..                     
T Consensus       161 ~~----~---~~~~~~AYrmSKaAlN~f~ksls~dL~~~~ilv~sihPGwV~TDMgg~~---------------------  212 (249)
T KOG1611|consen  161 GG----F---RPGGLSAYRMSKAALNMFAKSLSVDLKDDHILVVSIHPGWVQTDMGGKK---------------------  212 (249)
T ss_pred             CC----C---CCcchhhhHhhHHHHHHHHHHhhhhhcCCcEEEEEecCCeEEcCCCCCC---------------------
Confidence            11    0   01123456 666655554443332   3478888999999976543311                     


Q ss_pred             eecccHHHHHHHHHHHHhC--CCCCC-ceEe
Q 018503          253 FSWIHLDDIVNLIYEALSN--PSYRG-VING  280 (355)
Q Consensus       253 ~~~i~v~Dva~~~~~~~~~--~~~~~-~~~i  280 (355)
                       ..+.+++-+.-++..+.+  +...| .||.
T Consensus       213 -a~ltveeSts~l~~~i~kL~~~hnG~ffn~  242 (249)
T KOG1611|consen  213 -AALTVEESTSKLLASINKLKNEHNGGFFNR  242 (249)
T ss_pred             -cccchhhhHHHHHHHHHhcCcccCcceEcc
Confidence             246677777777776653  22344 5544

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA

Probab=98.96  E-value=7.5e-09  Score=112.31  Aligned_cols=165  Identities=15%  Similarity=0.128  Sum_probs=114.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhC-CCeEEEEecCCchh----------------------------------------
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQAD-NHQVRVLTRSRSKA----------------------------------------   87 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~----------------------------------------   87 (355)
                      +.+++|||||+|.||..++++|+++ |.+|+.++|+....                                        
T Consensus      1996 ~g~vvLVTGGarGIG~aiA~~LA~~~ga~viL~gRs~~~~~~p~~a~~~~~~~lk~~~~~~l~~~g~~~~P~~i~~~~~~ 2075 (2582)
T TIGR02813      1996 SDDVFLVTGGAKGVTFECALELAKQCQAHFILAGRSSFDDNEPSWAQGKDENELKKAAIQHLQASGEKPTPKKVDALVRP 2075 (2582)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHhcCCEEEEEeCCcccccCchhhhccchHHHHHhhhhhhhhcccccccchhhhcccc
Confidence            4579999999999999999999998 69999999983100                                        


Q ss_pred             -----------hccCCCCCCccCCCeeecCCcchhhhcC------CCcEEEECCCCCCC---CCCChhhHHHHHHHhhhh
Q 018503           88 -----------ELIFPGKKTRFFPGVMIAEEPQWRDCIQ------GSTAVVNLAGTPIG---TRWSSEIKKEIKESRIRV  147 (355)
Q Consensus        88 -----------~~~~~~~~~~~~~~~d~~~~~~~~~~~~------~~d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~  147 (355)
                                 ..+...+....+..+|+.|.+.+.+++.      .+|.|||+||....   ...+.+.+...+++|+.+
T Consensus      2076 ~~~~~ei~~~la~l~~~G~~v~y~~~DVtD~~av~~av~~v~~~g~IDgVVhnAGv~~~~~i~~~t~e~f~~v~~~nv~G 2155 (2582)
T TIGR02813      2076 VLSSLEIAQALAAFKAAGASAEYASADVTNSVSVAATVQPLNKTLQITGIIHGAGVLADKHIQDKTLEEFNAVYGTKVDG 2155 (2582)
T ss_pred             cchhHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHhCCCcEEEECCccCCCCCcccCCHHHHHHHHHHHHHH
Confidence                       0000001111234578888887776663      48999999997533   244567788999999999


Q ss_pred             HHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCChh-HHHHHHHHHHHHhccCC-CCeEEEEEecEEEe
Q 018503          148 TSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-LAEVCREWEGTALKVNK-DVRLALIRIGIVLG  225 (355)
Q Consensus       148 ~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~~y-~~k~~~~~~~~~~~~~~-~~~~~i~Rp~~i~G  225 (355)
                      +.++++++..  ...+++|++||.... ||..          ....| .+|.....+...+..+. ++++..+.||.+-+
T Consensus      2156 ~~~Ll~al~~--~~~~~IV~~SSvag~-~G~~----------gqs~YaaAkaaL~~la~~la~~~~~irV~sI~wG~wdt 2222 (2582)
T TIGR02813      2156 LLSLLAALNA--ENIKLLALFSSAAGF-YGNT----------GQSDYAMSNDILNKAALQLKALNPSAKVMSFNWGPWDG 2222 (2582)
T ss_pred             HHHHHHHHHH--hCCCeEEEEechhhc-CCCC----------CcHHHHHHHHHHHHHHHHHHHHcCCcEEEEEECCeecC
Confidence            9999999877  456789999997652 4421          12356 56654444444444333 57888899888765


Q ss_pred             C
Q 018503          226 K  226 (355)
Q Consensus       226 ~  226 (355)
                      .
T Consensus      2223 g 2223 (2582)
T TIGR02813      2223 G 2223 (2582)
T ss_pred             C
Confidence            4

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=98.94  E-value=2.1e-09  Score=82.91  Aligned_cols=208  Identities=18%  Similarity=0.163  Sum_probs=133.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCC-ccCCCeeecCCcchhhhcC---CCcEEEECC
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKT-RFFPGVMIAEEPQWRDCIQ---GSTAVVNLA  124 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~d~~~~~~~~~~~~---~~d~vi~~a  124 (355)
                      .+..|++||+.-.||+.+++.|.+.|.+|+++.|++.....+...... .....+|+.+-+.+.+++.   -+|-++++|
T Consensus         6 aG~~vlvTgagaGIG~~~v~~La~aGA~ViAvaR~~a~L~sLV~e~p~~I~Pi~~Dls~wea~~~~l~~v~pidgLVNNA   85 (245)
T KOG1207|consen    6 AGVIVLVTGAGAGIGKEIVLSLAKAGAQVIAVARNEANLLSLVKETPSLIIPIVGDLSAWEALFKLLVPVFPIDGLVNNA   85 (245)
T ss_pred             cceEEEeecccccccHHHHHHHHhcCCEEEEEecCHHHHHHHHhhCCcceeeeEecccHHHHHHHhhcccCchhhhhccc
Confidence            346899999988999999999999999999999999876655443211 0122456666666666554   369999999


Q ss_pred             CCCCCCCC---ChhhHHHHHHHhhhhHHHHHHHHHcC---CCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCChh-HHH
Q 018503          125 GTPIGTRW---SSEIKKEIKESRIRVTSKVVDLINES---PEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-LAE  197 (355)
Q Consensus       125 ~~~~~~~~---~~~~~~~~~~~n~~~~~~l~~a~~~~---~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~~y-~~k  197 (355)
                      |......+   ..+.....|++|+.+..++.+...+-   +.-...+|.+||.+.  ..     +++    ....| ..|
T Consensus        86 gvA~~~pf~eiT~q~fDr~F~VNvravi~v~Q~var~lv~R~~~GaIVNvSSqas--~R-----~~~----nHtvYcatK  154 (245)
T KOG1207|consen   86 GVATNHPFGEITQQSFDRTFAVNVRAVILVAQLVARNLVDRQIKGAIVNVSSQAS--IR-----PLD----NHTVYCATK  154 (245)
T ss_pred             hhhhcchHHHHhHHhhcceeeeeeeeeeeHHHHHHHhhhhccCCceEEEecchhc--cc-----ccC----CceEEeecH
Confidence            98543333   23445567789999987777764331   122335899998765  21     111    12345 566


Q ss_pred             HHHHHHHHHhccCC---CCeEEEEEecEEEeCCC-CcccchHHHHHHHhCCCCCCCCcceecccHHHHHHHHHHHHhCCC
Q 018503          198 VCREWEGTALKVNK---DVRLALIRIGIVLGKDG-GALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPS  273 (355)
Q Consensus       198 ~~~~~~~~~~~~~~---~~~~~i~Rp~~i~G~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~  273 (355)
                      ...+...+....+.   .+++..+.|..++.... ..|+.--..-.+...-|+      -.|..++.+++++..++....
T Consensus       155 aALDmlTk~lAlELGp~kIRVNsVNPTVVmT~MG~dnWSDP~K~k~mL~riPl------~rFaEV~eVVnA~lfLLSd~s  228 (245)
T KOG1207|consen  155 AALDMLTKCLALELGPQKIRVNSVNPTVVMTDMGRDNWSDPDKKKKMLDRIPL------KRFAEVDEVVNAVLFLLSDNS  228 (245)
T ss_pred             HHHHHHHHHHHHhhCcceeEeeccCCeEEEecccccccCCchhccchhhhCch------hhhhHHHHHHhhheeeeecCc
Confidence            66666555554443   58888999999986543 222221111111122222      238899999999999998765

>cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases

Probab=98.89  E-value=2.2e-08  Score=88.93  Aligned_cols=171  Identities=11%  Similarity=0.158  Sum_probs=97.7

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCC-------CeEEEEecCCch--hhccCCCCCCc--cCCCeeecCCcchhhhcCCCc
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADN-------HQVRVLTRSRSK--AELIFPGKKTR--FFPGVMIAEEPQWRDCIQGST  118 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g-------~~V~~~~r~~~~--~~~~~~~~~~~--~~~~~d~~~~~~~~~~~~~~d  118 (355)
                      +.||+||||+|++|++++..|+..+       .+|+.++++...  ...........  ... .++....++.+.++++|
T Consensus         2 ~~kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~~~~~~~g~~~Dl~d~~~~~~-~~~~~~~~~~~~l~~aD   80 (325)
T cd01336           2 PIRVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPALKALEGVVMELQDCAFPLL-KSVVATTDPEEAFKDVD   80 (325)
T ss_pred             CeEEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCCccccccceeeehhhcccccc-CCceecCCHHHHhCCCC
Confidence            3689999999999999999999854       589999996542  11110000000  001 13333456778889999


Q ss_pred             EEEECCCCCCCCCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCCCCccccCCC--CCCChh--
Q 018503          119 AVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESS--PSGNDY--  194 (355)
Q Consensus       119 ~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~--~~~~~y--  194 (355)
                      +|||+||.+...   ..+..+.++.|+...+.+.+.+.++......++.+|...-     .-.....+..  .+....  
T Consensus        81 iVI~tAG~~~~~---~~~R~~l~~~N~~i~~~i~~~i~~~~~~~~iiivvsNPvD-----~~t~~~~k~~~~~~~~~ig~  152 (325)
T cd01336          81 VAILVGAMPRKE---GMERKDLLKANVKIFKEQGEALDKYAKKNVKVLVVGNPAN-----TNALILLKYAPSIPKENFTA  152 (325)
T ss_pred             EEEEeCCcCCCC---CCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEecCcHH-----HHHHHHHHHcCCCCHHHEEe
Confidence            999999975322   2334688899999999999988884211333444443110     0000011111  110001  


Q ss_pred             HHHHHHHHHHHHhccCCCCeEEEEEecEEEeCCCC
Q 018503          195 LAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGG  229 (355)
Q Consensus       195 ~~k~~~~~~~~~~~~~~~~~~~i~Rp~~i~G~~~~  229 (355)
                      ...+-...+........+++...++-..|+|....
T Consensus       153 gt~LDs~R~r~~la~~l~v~~~~v~~~~V~GeHG~  187 (325)
T cd01336         153 LTRLDHNRAKSQIALKLGVPVSDVKNVIIWGNHSS  187 (325)
T ss_pred             eehHHHHHHHHHHHHHhCcChhhceEeEEEEcCCC
Confidence            11222233333344445777777777778887643

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PLN00106 malate dehydrogenase

Probab=98.87  E-value=4.6e-08  Score=86.33  Aligned_cols=171  Identities=13%  Similarity=0.128  Sum_probs=108.2

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhCC--CeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcCCCcEEEECCCCCC
Q 018503           51 MTVSVTGATGFIGRRLVQRLQADN--HQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTPI  128 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~~~  128 (355)
                      .||+|+|++|.+|+.++..|..++  .++..+++++.....+.-..........++.+.+++.+.++++|+|||+||.+.
T Consensus        19 ~KV~IiGaaG~VG~~~a~~l~~~~~~~el~L~Di~~~~g~a~Dl~~~~~~~~i~~~~~~~d~~~~l~~aDiVVitAG~~~   98 (323)
T PLN00106         19 FKVAVLGAAGGIGQPLSLLMKMNPLVSELHLYDIANTPGVAADVSHINTPAQVRGFLGDDQLGDALKGADLVIIPAGVPR   98 (323)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCCEEEEEecCCCCeeEchhhhCCcCceEEEEeCCCCHHHHcCCCCEEEEeCCCCC
Confidence            589999999999999999999766  489999987722221110000000111233456677889999999999999753


Q ss_pred             CCCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCCCCccccC--CCCCCChh-HHHHHHHHHHH
Q 018503          129 GTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDE--SSPSGNDY-LAEVCREWEGT  205 (355)
Q Consensus       129 ~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e--~~~~~~~y-~~k~~~~~~~~  205 (355)
                      ..   .....+.+..|...++++.+.+++  .+...+++++|--+..+..--......  ..++...| ..++-.+.+..
T Consensus        99 ~~---g~~R~dll~~N~~i~~~i~~~i~~--~~p~aivivvSNPvD~~~~i~t~~~~~~s~~p~~~viG~~~LDs~Rl~~  173 (323)
T PLN00106         99 KP---GMTRDDLFNINAGIVKTLCEAVAK--HCPNALVNIISNPVNSTVPIAAEVLKKAGVYDPKKLFGVTTLDVVRANT  173 (323)
T ss_pred             CC---CCCHHHHHHHHHHHHHHHHHHHHH--HCCCeEEEEeCCCccccHHHHHHHHHHcCCCCcceEEEEecchHHHHHH
Confidence            32   234568889999999999999999  677788888875441000000000111  12233334 33444555666


Q ss_pred             HhccCCCCeEEEEEecEEEeCC
Q 018503          206 ALKVNKDVRLALIRIGIVLGKD  227 (355)
Q Consensus       206 ~~~~~~~~~~~i~Rp~~i~G~~  227 (355)
                      .+....+++..-++ +.|+|..
T Consensus       174 ~lA~~lgv~~~~V~-~~ViGeH  194 (323)
T PLN00106        174 FVAEKKGLDPADVD-VPVVGGH  194 (323)
T ss_pred             HHHHHhCCChhheE-EEEEEeC
Confidence            66666788877775 4555554

>PRK06720 hypothetical protein; Provisional

Probab=98.86  E-value=1.1e-08  Score=82.16  Aligned_cols=125  Identities=13%  Similarity=0.072  Sum_probs=76.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhcc----CCCCCCccCCCeeecCCcchhhhc-------CCC
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELI----FPGKKTRFFPGVMIAEEPQWRDCI-------QGS  117 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~----~~~~~~~~~~~~d~~~~~~~~~~~-------~~~  117 (355)
                      +++.++||||+|.||..+++.|.+.|++|++++|+.+.....    ...........+|+.+.+++.+++       .++
T Consensus        15 ~gk~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~v~~~~~~~G~i   94 (169)
T PRK06720         15 AGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEITNLGGEALFVSYDMEKQGDWQRVISITLNAFSRI   94 (169)
T ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            457899999999999999999999999999999986543221    111111113356777777666543       368


Q ss_pred             cEEEECCCCCCC-CCCChhhHHHHHHHhhhhHHHHHHHH----HcC-----CCCCCcEEEEeeeee
Q 018503          118 TAVVNLAGTPIG-TRWSSEIKKEIKESRIRVTSKVVDLI----NES-----PEGVRPSVLVSATAL  173 (355)
Q Consensus       118 d~vi~~a~~~~~-~~~~~~~~~~~~~~n~~~~~~l~~a~----~~~-----~~~~~~~v~~Ss~~~  173 (355)
                      |++||+||.... ..+...........|+.++......+    .+.     ..+..||..+|+.++
T Consensus        95 DilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (169)
T PRK06720         95 DMLFQNAGLYKIDSIFSRQQENDSNVLCINDVWIEIKQLTSSFMKQQEEVVLSDLPIFGIIGTKGQ  160 (169)
T ss_pred             CEEEECCCcCCCCCcccccchhHhhceeccHHHHHHHHHHHHHHhcCCEEEeecCceeeEeccccc
Confidence            999999997532 11111111112234444332222222    110     245678888888766

>PRK08309 short chain dehydrogenase; Provisional

Probab=98.83  E-value=5.6e-09  Score=84.27  Aligned_cols=101  Identities=17%  Similarity=0.098  Sum_probs=72.6

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCC---CCCCccCCCeeecCCcchhhhcC-------CCcEE
Q 018503           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP---GKKTRFFPGVMIAEEPQWRDCIQ-------GSTAV  120 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~---~~~~~~~~~~d~~~~~~~~~~~~-------~~d~v  120 (355)
                      |+++|||||||+|. +++.|.+.|++|++++|+++....+..   .........+|+.|.+++.++++       .+|.+
T Consensus         1 m~vlVtGGtG~gg~-la~~L~~~G~~V~v~~R~~~~~~~l~~~l~~~~~i~~~~~Dv~d~~sv~~~i~~~l~~~g~id~l   79 (177)
T PRK08309          1 MHALVIGGTGMLKR-VSLWLCEKGFHVSVIARREVKLENVKRESTTPESITPLPLDYHDDDALKLAIKSTIEKNGPFDLA   79 (177)
T ss_pred             CEEEEECcCHHHHH-HHHHHHHCcCEEEEEECCHHHHHHHHHHhhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCeEE
Confidence            68999999998876 999999999999999998765443221   00001123468889888876663       46788


Q ss_pred             EECCCCCCCCCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCC----cEEEEeeeee
Q 018503          121 VNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVR----PSVLVSATAL  173 (355)
Q Consensus       121 i~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~----~~v~~Ss~~~  173 (355)
                      |+.+.                   +.++.++..+|++  .+++    +++++-++.+
T Consensus        80 v~~vh-------------------~~~~~~~~~~~~~--~gv~~~~~~~~h~~gs~~  115 (177)
T PRK08309         80 VAWIH-------------------SSAKDALSVVCRE--LDGSSETYRLFHVLGSAA  115 (177)
T ss_pred             EEecc-------------------ccchhhHHHHHHH--HccCCCCceEEEEeCCcC
Confidence            87754                   3456688999999  7887    8888765443

>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]

Probab=98.80  E-value=1.4e-08  Score=86.36  Aligned_cols=165  Identities=16%  Similarity=0.117  Sum_probs=106.1

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCC-----CCccCCCeeecCCcc----hhhhcCCC--cE
Q 018503           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGK-----KTRFFPGVMIAEEPQ----WRDCIQGS--TA  119 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~d~~~~~~----~~~~~~~~--d~  119 (355)
                      .-..|||||..||++.+++|+++|.+|+.++|+.++......+.     .+.....+|+.+.+.    +.+.+.+.  -+
T Consensus        50 ~WAVVTGaTDGIGKayA~eLAkrG~nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~~~~~ye~i~~~l~~~~VgI  129 (312)
T KOG1014|consen   50 SWAVVTGATDGIGKAYARELAKRGFNVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTKGDEVYEKLLEKLAGLDVGI  129 (312)
T ss_pred             CEEEEECCCCcchHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCCCchhHHHHHHHhcCCceEE
Confidence            46889999999999999999999999999999998876543321     122244578876664    55555554  57


Q ss_pred             EEECCCCCCC--CCC---ChhhHHHHHHHhhhhHHHHHHHHHc-C-CCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCC
Q 018503          120 VVNLAGTPIG--TRW---SSEIKKEIKESRIRVTSKVVDLINE-S-PEGVRPSVLVSATALGYYGTSETEVFDESSPSGN  192 (355)
Q Consensus       120 vi~~a~~~~~--~~~---~~~~~~~~~~~n~~~~~~l~~a~~~-~-~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~  192 (355)
                      +|||+|....  ..+   ..+..+.++.+|+.++..+.+...- + ..+...++++||.+..           -..|...
T Consensus       130 LVNNvG~~~~~P~~f~~~~~~~~~~ii~vN~~~~~~~t~~ilp~M~~r~~G~IvnigS~ag~-----------~p~p~~s  198 (312)
T KOG1014|consen  130 LVNNVGMSYDYPESFLKYPEGELQNIINVNILSVTLLTQLILPGMVERKKGIIVNIGSFAGL-----------IPTPLLS  198 (312)
T ss_pred             EEecccccCCCcHHHHhCchhhhhheeEEecchHHHHHHHhhhhhhcCCCceEEEecccccc-----------ccChhHH
Confidence            9999998642  111   1223356677888886666554422 1 1455678999987541           1122234


Q ss_pred             hh-HHHHHHHH----HHHHhccCCCCeEEEEEecEEEeCC
Q 018503          193 DY-LAEVCREW----EGTALKVNKDVRLALIRIGIVLGKD  227 (355)
Q Consensus       193 ~y-~~k~~~~~----~~~~~~~~~~~~~~i~Rp~~i~G~~  227 (355)
                      .| .+|...+.    +.+.+.. .|+.+..+-|..|-++.
T Consensus       199 ~ysasK~~v~~~S~~L~~Ey~~-~gI~Vq~v~p~~VaTkm  237 (312)
T KOG1014|consen  199 VYSASKAFVDFFSRCLQKEYES-KGIFVQSVIPYLVATKM  237 (312)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHh-cCeEEEEeehhheeccc
Confidence            45 44543332    2333332 48999999998888765

>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]

Probab=98.63  E-value=1.1e-07  Score=84.92  Aligned_cols=76  Identities=24%  Similarity=0.199  Sum_probs=62.6

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCC-CeEEEEecCCchhhccCCCC-CCccCCCeeecCCcchhhhcCCCcEEEECCCC
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADN-HQVRVLTRSRSKAELIFPGK-KTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT  126 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~  126 (355)
                      +|+|+|+|+ |++|+.++..|+++| ++|++.+|+.++........ .......+|..|.+.+.+++++.|+||+++..
T Consensus         1 m~~ilviGa-G~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~~~~v~~~~vD~~d~~al~~li~~~d~VIn~~p~   78 (389)
T COG1748           1 MMKILVIGA-GGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELIGGKVEALQVDAADVDALVALIKDFDLVINAAPP   78 (389)
T ss_pred             CCcEEEECC-chhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhccccceeEEecccChHHHHHHHhcCCEEEEeCCc
Confidence            478999997 999999999999998 99999999988766553321 11124568899999999999999999999975

>PRK05086 malate dehydrogenase; Provisional

Probab=98.62  E-value=6.3e-07  Score=79.27  Aligned_cols=113  Identities=16%  Similarity=0.218  Sum_probs=78.8

Q ss_pred             CEEEEEcCCchHHHHHHHHHHh---CCCeEEEEecCCchhhccCCCCCCccCC-Ceeec--CCcchhhhcCCCcEEEECC
Q 018503           51 MTVSVTGATGFIGRRLVQRLQA---DNHQVRVLTRSRSKAELIFPGKKTRFFP-GVMIA--EEPQWRDCIQGSTAVVNLA  124 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~---~g~~V~~~~r~~~~~~~~~~~~~~~~~~-~~d~~--~~~~~~~~~~~~d~vi~~a  124 (355)
                      |||+|+||+|.+|++++..|..   .++++.+++|++.. .........  .. ...+.  +.+++.+.++++|+||.++
T Consensus         1 ~KI~IIGAsG~VG~aia~~l~~~~~~~~el~L~d~~~~~-~g~alDl~~--~~~~~~i~~~~~~d~~~~l~~~DiVIita   77 (312)
T PRK05086          1 MKVAVLGAAGGIGQALALLLKTQLPAGSELSLYDIAPVT-PGVAVDLSH--IPTAVKIKGFSGEDPTPALEGADVVLISA   77 (312)
T ss_pred             CEEEEECCCCHHHHHHHHHHHcCCCCccEEEEEecCCCC-cceehhhhc--CCCCceEEEeCCCCHHHHcCCCCEEEEcC
Confidence            6899999999999999998855   25789998987532 110000000  00 01121  2456667788999999999


Q ss_pred             CCCCCCCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeee
Q 018503          125 GTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSAT  171 (355)
Q Consensus       125 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~  171 (355)
                      |.....   .....+.+..|....+.+++++++  .+.+++|.+.|-
T Consensus        78 G~~~~~---~~~R~dll~~N~~i~~~ii~~i~~--~~~~~ivivvsN  119 (312)
T PRK05086         78 GVARKP---GMDRSDLFNVNAGIVKNLVEKVAK--TCPKACIGIITN  119 (312)
T ss_pred             CCCCCC---CCCHHHHHHHHHHHHHHHHHHHHH--hCCCeEEEEccC
Confidence            975332   234568889999999999999999  677788777763

>PRK09620 hypothetical protein; Provisional

Probab=98.54  E-value=1.5e-07  Score=79.00  Aligned_cols=79  Identities=18%  Similarity=0.111  Sum_probs=49.8

Q ss_pred             CCCEEEEEcCC----------------chHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhh
Q 018503           49 SQMTVSVTGAT----------------GFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRD  112 (355)
Q Consensus        49 ~~~~IlVtGat----------------G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~  112 (355)
                      .+|+||||+|.                ||+|++|+++|+++|++|+.+++....................+....+.+.+
T Consensus         2 ~gk~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~~Ga~V~li~g~~~~~~~~~~~~~~~~~V~s~~d~~~~l~~   81 (229)
T PRK09620          2 KGKKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELISKGAHVIYLHGYFAEKPNDINNQLELHPFEGIIDLQDKMKS   81 (229)
T ss_pred             CCCEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHHHCCCeEEEEeCCCcCCCcccCCceeEEEEecHHHHHHHHHH
Confidence            35799999875                99999999999999999999987543211111000000000010111245666


Q ss_pred             hcC--CCcEEEECCCCC
Q 018503          113 CIQ--GSTAVVNLAGTP  127 (355)
Q Consensus       113 ~~~--~~d~vi~~a~~~  127 (355)
                      ++.  ++|+|||+||..
T Consensus        82 ~~~~~~~D~VIH~AAvs   98 (229)
T PRK09620         82 IITHEKVDAVIMAAAGS   98 (229)
T ss_pred             HhcccCCCEEEECcccc
Confidence            664  689999999974

>TIGR00715 precor6x_red precorrin-6x reductase

Probab=98.54  E-value=3.9e-07  Score=77.74  Aligned_cols=96  Identities=16%  Similarity=0.141  Sum_probs=70.9

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcC--CCcEEEECCCCCC
Q 018503           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ--GSTAVVNLAGTPI  128 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--~~d~vi~~a~~~~  128 (355)
                      |+|||+||||. |+.|++.|.+.||+|++.+++......+......  ....+..|.+++.++++  ++|+||+++... 
T Consensus         1 m~ILvlGGT~e-gr~la~~L~~~g~~v~~s~~t~~~~~~~~~~g~~--~v~~g~l~~~~l~~~l~~~~i~~VIDAtHPf-   76 (256)
T TIGR00715         1 MTVLLMGGTVD-SRAIAKGLIAQGIEILVTVTTSEGKHLYPIHQAL--TVHTGALDPQELREFLKRHSIDILVDATHPF-   76 (256)
T ss_pred             CeEEEEechHH-HHHHHHHHHhCCCeEEEEEccCCccccccccCCc--eEEECCCCHHHHHHHHHhcCCCEEEEcCCHH-
Confidence            68999999999 9999999999999999999998765544432110  12245567778888775  699999998641 


Q ss_pred             CCCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEE
Q 018503          129 GTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVL  167 (355)
Q Consensus       129 ~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~  167 (355)
                                     -...+.++.++|++  .++..+-|
T Consensus        77 ---------------A~~is~~a~~a~~~--~~ipylR~   98 (256)
T TIGR00715        77 ---------------AAQITTNATAVCKE--LGIPYVRF   98 (256)
T ss_pred             ---------------HHHHHHHHHHHHHH--hCCcEEEE
Confidence                           12456688899999  67764433

This enzyme was found to be a monomer by gel filtration.

>PRK06732 phosphopantothenate--cysteine ligase; Validated

Probab=98.54  E-value=2.3e-07  Score=78.32  Aligned_cols=71  Identities=13%  Similarity=0.208  Sum_probs=46.0

Q ss_pred             EEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCC----cchhhhcCCCcEEEECCCCC
Q 018503           52 TVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEE----PQWRDCIQGSTAVVNLAGTP  127 (355)
Q Consensus        52 ~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~----~~~~~~~~~~d~vi~~a~~~  127 (355)
                      |++=-.+||++|++|+++|+++|++|++++|...........     ...+.+.+.    +.+.+.++++|+|||+||..
T Consensus        18 R~itN~SSG~iG~aLA~~L~~~G~~V~li~r~~~~~~~~~~~-----v~~i~v~s~~~m~~~l~~~~~~~DivIh~AAvs   92 (229)
T PRK06732         18 RGITNHSTGQLGKIIAETFLAAGHEVTLVTTKTAVKPEPHPN-----LSIIEIENVDDLLETLEPLVKDHDVLIHSMAVS   92 (229)
T ss_pred             eeecCccchHHHHHHHHHHHhCCCEEEEEECcccccCCCCCC-----eEEEEEecHHHHHHHHHHHhcCCCEEEeCCccC
Confidence            444446799999999999999999999999864321100000     111122222    24445567899999999974

>KOG1204 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=98.45  E-value=6.7e-07  Score=72.62  Aligned_cols=207  Identities=17%  Similarity=0.065  Sum_probs=120.4

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCCeEEE--EecCCchhhccCCCC-CCccCCCeeecCCcchhhhcC-------CCcE
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRV--LTRSRSKAELIFPGK-KTRFFPGVMIAEEPQWRDCIQ-------GSTA  119 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~--~~r~~~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~~-------~~d~  119 (355)
                      .+-|||||+|..||.-++..+.+.+-+...  ..|.......+.... ....+...|+.....+.++.+       +-|.
T Consensus         6 r~villTGaSrgiG~~~v~~i~aed~e~~r~g~~r~~a~~~~L~v~~gd~~v~~~g~~~e~~~l~al~e~~r~k~gkr~i   85 (253)
T KOG1204|consen    6 RKVILLTGASRGIGTGSVATILAEDDEALRYGVARLLAELEGLKVAYGDDFVHVVGDITEEQLLGALREAPRKKGGKRDI   85 (253)
T ss_pred             ceEEEEecCCCCccHHHHHHHHhcchHHHHHhhhcccccccceEEEecCCcceechHHHHHHHHHHHHhhhhhcCCceeE
Confidence            357999999999999999999988755443  334333322211110 000011123333332333221       4699


Q ss_pred             EEECCCCCCCC------CCChhhHHHHHHHhhhhHHHHHHHHHcC-CCC--CCcEEEEeeeeeeeeCCCCCccccCCCCC
Q 018503          120 VVNLAGTPIGT------RWSSEIKKEIKESRIRVTSKVVDLINES-PEG--VRPSVLVSATALGYYGTSETEVFDESSPS  190 (355)
Q Consensus       120 vi~~a~~~~~~------~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~~--~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~  190 (355)
                      |||+||...+.      .-+.+.++.+++.|+.+...|...+... ...  .+.+|++||.++.  -     |    ...
T Consensus        86 iI~NAG~lgdvsk~~~~~~D~~qw~ky~~~NlfS~VsL~~~~l~~lk~~p~~~~vVnvSS~aav--~-----p----~~~  154 (253)
T KOG1204|consen   86 IIHNAGSLGDVSKGAVDLGDSDQWKKYWDLNLFSMVSLVQWALPKLKKSPVNGNVVNVSSLAAV--R-----P----FSS  154 (253)
T ss_pred             EEecCCCccchhhccCCcccHHHHHHHHHhhhhhHHhhHHHHHHHhcCCCccCeEEEecchhhh--c-----c----ccH
Confidence            99999986441      2344667889999999988887765442 112  4779999998762  1     1    112


Q ss_pred             CChh-HHHHHHHHHHHHhccC-C-CCeEEEEEecEEEeCCC---CcccchHHHH-HHHhCCCCCCCCcceecccHHHHHH
Q 018503          191 GNDY-LAEVCREWEGTALKVN-K-DVRLALIRIGIVLGKDG---GALAKMIPLF-MMFAGGPLGSGQQWFSWIHLDDIVN  263 (355)
Q Consensus       191 ~~~y-~~k~~~~~~~~~~~~~-~-~~~~~i~Rp~~i~G~~~---~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~v~Dva~  263 (355)
                      ...| .+|...+........+ . ++....++||.+-.+..   .....+-|.. ...++.     .+.-.++.-.+.|+
T Consensus       155 wa~yc~~KaAr~m~f~~lA~EEp~~v~vl~~aPGvvDT~mq~~ir~~~~~~p~~l~~f~el-----~~~~~ll~~~~~a~  229 (253)
T KOG1204|consen  155 WAAYCSSKAARNMYFMVLASEEPFDVRVLNYAPGVVDTQMQVCIRETSRMTPADLKMFKEL-----KESGQLLDPQVTAK  229 (253)
T ss_pred             HHHhhhhHHHHHHHHHHHhhcCccceeEEEccCCcccchhHHHHhhccCCCHHHHHHHHHH-----HhcCCcCChhhHHH
Confidence            3456 6777777776655543 3 88899999998765431   0111111111 111110     01113677788899


Q ss_pred             HHHHHHhCC
Q 018503          264 LIYEALSNP  272 (355)
Q Consensus       264 ~~~~~~~~~  272 (355)
                      .+..++++.
T Consensus       230 ~l~~L~e~~  238 (253)
T KOG1204|consen  230 VLAKLLEKG  238 (253)
T ss_pred             HHHHHHHhc
Confidence            999988875

>cd00704 MDH Malate dehydrogenase

Probab=98.44  E-value=2.3e-06  Score=75.91  Aligned_cols=105  Identities=12%  Similarity=0.179  Sum_probs=73.8

Q ss_pred             EEEEEcCCchHHHHHHHHHHhCC-------CeEEEEecCC--chhhccCCCCCCccCCCeeecCC-----------cchh
Q 018503           52 TVSVTGATGFIGRRLVQRLQADN-------HQVRVLTRSR--SKAELIFPGKKTRFFPGVMIAEE-----------PQWR  111 (355)
Q Consensus        52 ~IlVtGatG~iG~~l~~~L~~~g-------~~V~~~~r~~--~~~~~~~~~~~~~~~~~~d~~~~-----------~~~~  111 (355)
                      ||.|+||+|.+|+.++..|...|       ++++.++++.  +.....          ..|+.|.           ....
T Consensus         2 KV~IiGAaG~VG~~~a~~L~~~~~~~~~~~~~l~L~Di~~~~~~~~g~----------~~Dl~d~~~~~~~~~~i~~~~~   71 (323)
T cd00704           2 HVLITGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPPAMKALEGV----------VMELQDCAFPLLKGVVITTDPE   71 (323)
T ss_pred             EEEEECCCcHHHHHHHHHHHhCCccCCCCceEEEEEecCCccCcccee----------eeehhhhcccccCCcEEecChH
Confidence            79999999999999999999765       2589999876  322111          1222222           3456


Q ss_pred             hhcCCCcEEEECCCCCCCCCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEe
Q 018503          112 DCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVS  169 (355)
Q Consensus       112 ~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~S  169 (355)
                      +.++++|+|||+||.+..   ...+-.+.+..|+...+.+...+++.+.....++.+|
T Consensus        72 ~~~~~aDiVVitAG~~~~---~g~tR~dll~~N~~i~~~i~~~i~~~~~~~~iiivvs  126 (323)
T cd00704          72 EAFKDVDVAILVGAFPRK---PGMERADLLRKNAKIFKEQGEALNKVAKPTVKVLVVG  126 (323)
T ss_pred             HHhCCCCEEEEeCCCCCC---cCCcHHHHHHHhHHHHHHHHHHHHHhCCCCeEEEEeC
Confidence            788999999999997532   2344568889999999999999988411223344444

Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases

Probab=98.41  E-value=2e-06  Score=76.25  Aligned_cols=170  Identities=14%  Similarity=0.186  Sum_probs=105.4

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCC-------eEEEEecCCch--hhccCCCCCCc---cCCCeeecCCcchhhhcCCC
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNH-------QVRVLTRSRSK--AELIFPGKKTR---FFPGVMIAEEPQWRDCIQGS  117 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~-------~V~~~~r~~~~--~~~~~~~~~~~---~~~~~d~~~~~~~~~~~~~~  117 (355)
                      ++||.|+|++|.+|.+++..|+..|.       ++..++.....  ...........   ....+.+.  ....+.++++
T Consensus         2 p~KV~IiGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~i~--~~~~~~~~da   79 (322)
T cd01338           2 PVRVAVTGAAGQIGYSLLFRIASGEMFGPDQPVILQLLELPQALKALEGVAMELEDCAFPLLAEIVIT--DDPNVAFKDA   79 (322)
T ss_pred             CeEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEEecCCcccccceeehhhhhccccccCceEEe--cCcHHHhCCC
Confidence            46999999999999999999998764       78888885432  21111110000   01122333  2334678899


Q ss_pred             cEEEECCCCCCCCCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCCCCccccC--CCCCCChh-
Q 018503          118 TAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDE--SSPSGNDY-  194 (355)
Q Consensus       118 d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e--~~~~~~~y-  194 (355)
                      |+||.+||.+..   ...+-.+.+..|+...+.+...+.+++.....++.+|...-    -........  ..|+...| 
T Consensus        80 DivvitaG~~~k---~g~tR~dll~~N~~i~~~i~~~i~~~~~~~~iiivvsNPvD----~~t~~~~k~sg~~p~~~ViG  152 (322)
T cd01338          80 DWALLVGAKPRG---PGMERADLLKANGKIFTAQGKALNDVASRDVKVLVVGNPCN----TNALIAMKNAPDIPPDNFTA  152 (322)
T ss_pred             CEEEEeCCCCCC---CCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEecCcHH----HHHHHHHHHcCCCChHheEE
Confidence            999999997522   23345678899999999999999884211334555542110    000000011  12233334 


Q ss_pred             HHHHHHHHHHHHhccCCCCeEEEEEecEEEeCCC
Q 018503          195 LAEVCREWEGTALKVNKDVRLALIRIGIVLGKDG  228 (355)
Q Consensus       195 ~~k~~~~~~~~~~~~~~~~~~~i~Rp~~i~G~~~  228 (355)
                      .+++-.+.+...+....+++...+|...|||+..
T Consensus       153 ~t~LDs~Rl~~~la~~lgv~~~~v~~~~V~GeHG  186 (322)
T cd01338         153 MTRLDHNRAKSQLAKKAGVPVTDVKNMVIWGNHS  186 (322)
T ss_pred             ehHHHHHHHHHHHHHHhCcChhHeEEEEEEeCCc
Confidence            4555566666667777799999999999999874

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []

Probab=98.33  E-value=1.5e-06  Score=67.40  Aligned_cols=105  Identities=17%  Similarity=0.193  Sum_probs=72.3

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhCC--CeEEEEecCCchhhccCCCCCCc-cCCCeeecCCcchhhhcCCCcEEEECCCCC
Q 018503           51 MTVSVTGATGFIGRRLVQRLQADN--HQVRVLTRSRSKAELIFPGKKTR-FFPGVMIAEEPQWRDCIQGSTAVVNLAGTP  127 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~-~~~~~d~~~~~~~~~~~~~~d~vi~~a~~~  127 (355)
                      |||.|+|++|.+|++++..|...+  .++..++++.............. .....+..-.....+.++++|+||.+||.+
T Consensus         1 ~KV~IiGa~G~VG~~~a~~l~~~~l~~ei~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~i~~~~~~~~~~aDivvitag~~   80 (141)
T PF00056_consen    1 MKVAIIGAAGNVGSTLALLLAQQGLADEIVLIDINEDKAEGEALDLSHASAPLPSPVRITSGDYEALKDADIVVITAGVP   80 (141)
T ss_dssp             SEEEEESTTSHHHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHHHHHGSTEEEEEEESSGGGGTTESEEEETTSTS
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCceEEeccCcccceeeehhhhhhhhhcccccccccccccccccccEEEEecccc
Confidence            689999999999999999999986  58999999865433211100000 011111111224456678999999999975


Q ss_pred             CCCCCChhhHHHHHHHhhhhHHHHHHHHHcC
Q 018503          128 IGTRWSSEIKKEIKESRIRVTSKVVDLINES  158 (355)
Q Consensus       128 ~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~  158 (355)
                      ..   ......+.++.|....+.+.+.+.+.
T Consensus        81 ~~---~g~sR~~ll~~N~~i~~~~~~~i~~~  108 (141)
T PF00056_consen   81 RK---PGMSRLDLLEANAKIVKEIAKKIAKY  108 (141)
T ss_dssp             SS---TTSSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cc---ccccHHHHHHHhHhHHHHHHHHHHHh
Confidence            32   23345688899999999999999884

L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....

>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=98.31  E-value=7.5e-07  Score=68.91  Aligned_cols=216  Identities=17%  Similarity=0.160  Sum_probs=127.3

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCC-CCCCccCCCeeecCCcchhhhcC-------CCcEEE
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP-GKKTRFFPGVMIAEEPQWRDCIQ-------GSTAVV  121 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-~~~~~~~~~~d~~~~~~~~~~~~-------~~d~vi  121 (355)
                      ....+||||...+|...++.|.+.|..|..++-..++...... .+....+..+|+++++++..++.       ..|+.+
T Consensus         9 glvalvtggasglg~ataerlakqgasv~lldlp~skg~~vakelg~~~vf~padvtsekdv~aala~ak~kfgrld~~v   88 (260)
T KOG1199|consen    9 GLVALVTGGASGLGKATAERLAKQGASVALLDLPQSKGADVAKELGGKVVFTPADVTSEKDVRAALAKAKAKFGRLDALV   88 (260)
T ss_pred             CeeEEeecCcccccHHHHHHHHhcCceEEEEeCCcccchHHHHHhCCceEEeccccCcHHHHHHHHHHHHhhccceeeee
Confidence            3468999999999999999999999999999987766543322 22212245578888888877663       469999


Q ss_pred             ECCCCCCC---------CCCChhhHHHHHHHhhhhHHHHHHHHHc-C-----CCCCCcEEEEeeeeeeeeCCCCCccccC
Q 018503          122 NLAGTPIG---------TRWSSEIKKEIKESRIRVTSKVVDLINE-S-----PEGVRPSVLVSATALGYYGTSETEVFDE  186 (355)
Q Consensus       122 ~~a~~~~~---------~~~~~~~~~~~~~~n~~~~~~l~~a~~~-~-----~~~~~~~v~~Ss~~~~~yg~~~~~~~~e  186 (355)
                      +|||....         .....++.+..+++|+.++-|+++.... +     ..+..|=|.+-+.++..|....++    
T Consensus        89 ncagia~a~ktyn~~k~~~h~ledfqrvidvn~~gtfnvirl~aglmg~nepdq~gqrgviintasvaafdgq~gq----  164 (260)
T KOG1199|consen   89 NCAGIAYAFKTYNVQKKKHHDLEDFQRVIDVNVLGTFNVIRLGAGLMGENEPDQNGQRGVIINTASVAAFDGQTGQ----  164 (260)
T ss_pred             eccceeeeeeeeeecccccccHHHhhheeeeeeeeeeeeeeehhhhhcCCCCCCCCcceEEEeeceeeeecCccch----
Confidence            99997421         2334567788889999999999875432 1     123445556666666446533322    


Q ss_pred             CCCCCChh-HHHHHHHHHHH---HhccCCCCeEEEEEecEEEeCCCCcccchHHHHHHHhCCCCCCCCcceecccHHHHH
Q 018503          187 SSPSGNDY-LAEVCREWEGT---ALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIV  262 (355)
Q Consensus       187 ~~~~~~~y-~~k~~~~~~~~---~~~~~~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva  262 (355)
                           ..| .+|...-.+..   .-....|++++.+-||.+-.|-...+..-   ++....+.+..+.   .+-|..+-+
T Consensus       165 -----aaysaskgaivgmtlpiardla~~gir~~tiapglf~tpllsslpek---v~~fla~~ipfps---rlg~p~eya  233 (260)
T KOG1199|consen  165 -----AAYSASKGAIVGMTLPIARDLAGDGIRFNTIAPGLFDTPLLSSLPEK---VKSFLAQLIPFPS---RLGHPHEYA  233 (260)
T ss_pred             -----hhhhcccCceEeeechhhhhcccCceEEEeecccccCChhhhhhhHH---HHHHHHHhCCCch---hcCChHHHH
Confidence                 122 22211111110   01112489999998887665543322221   2212222221111   134555666


Q ss_pred             HHHHHHHhCCCCCC-ceEe
Q 018503          263 NLIYEALSNPSYRG-VING  280 (355)
Q Consensus       263 ~~~~~~~~~~~~~~-~~~i  280 (355)
                      ..+-.+++++-.+| +..+
T Consensus       234 hlvqaiienp~lngevir~  252 (260)
T KOG1199|consen  234 HLVQAIIENPYLNGEVIRF  252 (260)
T ss_pred             HHHHHHHhCcccCCeEEEe
Confidence            66777777765433 4433

>TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent

Probab=98.30  E-value=7.8e-06  Score=72.61  Aligned_cols=96  Identities=13%  Similarity=0.129  Sum_probs=68.9

Q ss_pred             EEEEEcCCchHHHHHHHHHHhCC-------CeEEEEecCCchhhccCCCCCCccCCCeeecCCc-----------chhhh
Q 018503           52 TVSVTGATGFIGRRLVQRLQADN-------HQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEP-----------QWRDC  113 (355)
Q Consensus        52 ~IlVtGatG~iG~~l~~~L~~~g-------~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~-----------~~~~~  113 (355)
                      ||.|+|++|.+|++++..|...+       ++++.+++.+......        ....|+.|..           ...+.
T Consensus         1 ~V~IiGaaG~VG~~~a~~l~~~~~~~~~~e~el~LiD~~~~~~~a~--------g~~~Dl~d~~~~~~~~~~~~~~~~~~   72 (324)
T TIGR01758         1 RVVVTGAAGQIGYALLPMIARGRMLGKDQPIILHLLDIPPAMKVLE--------GVVMELMDCAFPLLDGVVPTHDPAVA   72 (324)
T ss_pred             CEEEECCCcHHHHHHHHHHHhccccCCCCccEEEEEecCCcccccc--------eeEeehhcccchhcCceeccCChHHH
Confidence            58999999999999999999754       2699999865432110        1112333222           33577


Q ss_pred             cCCCcEEEECCCCCCCCCCChhhHHHHHHHhhhhHHHHHHHHHcC
Q 018503          114 IQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINES  158 (355)
Q Consensus       114 ~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~  158 (355)
                      ++++|+||++||.+..   ...+..+.+..|+...+.+.+.+.++
T Consensus        73 ~~~aDiVVitAG~~~~---~~~tr~~ll~~N~~i~k~i~~~i~~~  114 (324)
T TIGR01758        73 FTDVDVAILVGAFPRK---EGMERRDLLSKNVKIFKEQGRALDKL  114 (324)
T ss_pred             hCCCCEEEEcCCCCCC---CCCcHHHHHHHHHHHHHHHHHHHHhh
Confidence            8899999999997522   22345788899999999999999883

This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography

>PRK14982 acyl-ACP reductase; Provisional

Probab=98.29  E-value=1.3e-06  Score=77.28  Aligned_cols=71  Identities=27%  Similarity=0.392  Sum_probs=53.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhC-C-CeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcCCCcEEEECCCC
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQAD-N-HQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT  126 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~-g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~  126 (355)
                      ..++|+||||+|++|+.++++|.++ | .+++.+.|+..+...+...     +...++.   .+.+++.++|+|||+++.
T Consensus       154 ~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~e-----l~~~~i~---~l~~~l~~aDiVv~~ts~  225 (340)
T PRK14982        154 SKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQAE-----LGGGKIL---SLEEALPEADIVVWVASM  225 (340)
T ss_pred             CCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHHH-----hccccHH---hHHHHHccCCEEEECCcC
Confidence            4579999999999999999999864 5 6899999987665544332     1112332   466788899999999986


Q ss_pred             C
Q 018503          127 P  127 (355)
Q Consensus       127 ~  127 (355)
                      +
T Consensus       226 ~  226 (340)
T PRK14982        226 P  226 (340)
T ss_pred             C
Confidence            4

>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase

Probab=98.16  E-value=2.3e-06  Score=70.67  Aligned_cols=77  Identities=19%  Similarity=0.245  Sum_probs=56.4

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCC---CccCCCeeecCCcchhhhcCCCcEEEECCCC
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKK---TRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT  126 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~---~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~  126 (355)
                      .++++|+||+|.+|+.+++.|.+.|++|++++|+.++...+.....   ......+|..+.+++.+.++++|+||++...
T Consensus        28 ~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~diVi~at~~  107 (194)
T cd01078          28 GKTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAADSLRARFGEGVGAVETSDDAARAAAIKGADVVFAAGAA  107 (194)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhhcCCcEEEeeCCCHHHHHHHHhcCCEEEECCCC
Confidence            4789999999999999999999999999999998765443321100   0001123555667777888999999998754

Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo

>cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity

Probab=98.16  E-value=3e-05  Score=68.63  Aligned_cols=115  Identities=18%  Similarity=0.223  Sum_probs=73.6

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhCCC--eEEEEecCC--chhhccCCCCCC---ccCCCeeecCCcchhhhcCCCcEEEEC
Q 018503           51 MTVSVTGATGFIGRRLVQRLQADNH--QVRVLTRSR--SKAELIFPGKKT---RFFPGVMIAEEPQWRDCIQGSTAVVNL  123 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~--~~~~~~~~~~~~---~~~~~~d~~~~~~~~~~~~~~d~vi~~  123 (355)
                      |||.|+|++|++|..++..|+..|+  +|++++|..  +...........   ......++.-..+.. .++++|+||.+
T Consensus         1 ~kI~IiGatG~vG~~~a~~l~~~g~~~~v~lvd~~~~~~~l~~~~~dl~d~~~~~~~~~~i~~~~d~~-~l~~aDiViit   79 (309)
T cd05294           1 MKVSIIGASGRVGSATALLLAKEDVVKEINLISRPKSLEKLKGLRLDIYDALAAAGIDAEIKISSDLS-DVAGSDIVIIT   79 (309)
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEECcccccccccccchhhhchhccCCCcEEEECCCHH-HhCCCCEEEEe
Confidence            6899999999999999999999986  599999954  222111110000   001112332222343 48899999999


Q ss_pred             CCCCCCCCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEee
Q 018503          124 AGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSA  170 (355)
Q Consensus       124 a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss  170 (355)
                      +|.+..   ...+..+.+..|+...+.+.+.+.+.. ....++.+++
T Consensus        80 ag~p~~---~~~~r~dl~~~n~~i~~~~~~~i~~~~-~~~~viv~~n  122 (309)
T cd05294          80 AGVPRK---EGMSRLDLAKKNAKIVKKYAKQIAEFA-PDTKILVVTN  122 (309)
T ss_pred             cCCCCC---CCCCHHHHHHHHHHHHHHHHHHHHHHC-CCeEEEEeCC
Confidence            997422   222345777899999999999888742 2334555554

The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox

>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated

Probab=98.10  E-value=8e-06  Score=74.45  Aligned_cols=73  Identities=12%  Similarity=0.186  Sum_probs=55.5

Q ss_pred             CCCCEEEEEcC----------------CchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchh
Q 018503           48 ASQMTVSVTGA----------------TGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWR  111 (355)
Q Consensus        48 ~~~~~IlVtGa----------------tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~  111 (355)
                      ..+++|+||||                +|.+|.++++.|.++|++|++++++.+. ..  ...    ...+|+.+.+++.
T Consensus       186 l~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~Ga~V~~v~~~~~~-~~--~~~----~~~~dv~~~~~~~  258 (399)
T PRK05579        186 LAGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRGADVTLVSGPVNL-PT--PAG----VKRIDVESAQEML  258 (399)
T ss_pred             cCCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCCCEEEEeCCCccc-cC--CCC----cEEEccCCHHHHH
Confidence            35689999999                9999999999999999999999987631 11  110    2346777776665


Q ss_pred             hhc----CCCcEEEECCCCC
Q 018503          112 DCI----QGSTAVVNLAGTP  127 (355)
Q Consensus       112 ~~~----~~~d~vi~~a~~~  127 (355)
                      +.+    .++|++||+||..
T Consensus       259 ~~v~~~~~~~DilI~~Aav~  278 (399)
T PRK05579        259 DAVLAALPQADIFIMAAAVA  278 (399)
T ss_pred             HHHHHhcCCCCEEEEccccc
Confidence            554    4689999999974

>KOG1478 consensus 3-keto sterol reductase [Lipid transport and metabolism]

Probab=98.10  E-value=1.9e-05  Score=65.27  Aligned_cols=174  Identities=17%  Similarity=0.087  Sum_probs=106.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCC-----CeEEEEecCCchhhcc----CCC----CCCccCCCeeecCCcchhh---
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADN-----HQVRVLTRSRSKAELI----FPG----KKTRFFPGVMIAEEPQWRD---  112 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g-----~~V~~~~r~~~~~~~~----~~~----~~~~~~~~~d~~~~~~~~~---  112 (355)
                      +.+.+||||++..+|-+|+.+|++..     ..+...+|+.++.+..    ...    ..+..+..+|+.+-.++.+   
T Consensus         2 ~RKvalITGanSglGl~i~~RLl~~~De~~~ltl~ltcR~~~kae~vc~~lk~f~p~~~i~~~yvlvD~sNm~Sv~~A~~   81 (341)
T KOG1478|consen    2 MRKVALITGANSGLGLAICKRLLAEDDENVRLTLCLTCRNMSKAEAVCAALKAFHPKSTIEVTYVLVDVSNMQSVFRASK   81 (341)
T ss_pred             CceEEEEecCCCcccHHHHHHHHhccCCceeEEEEEEeCChhHHHHHHHHHHHhCCCceeEEEEEEEehhhHHHHHHHHH
Confidence            45679999999999999999999864     3577788988776532    111    1111133455555444433   


Q ss_pred             ----hcCCCcEEEECCCCCCC------------------------------CCCChhhHHHHHHHhhhhHHHHHHHHHcC
Q 018503          113 ----CIQGSTAVVNLAGTPIG------------------------------TRWSSEIKKEIKESRIRVTSKVVDLINES  158 (355)
Q Consensus       113 ----~~~~~d~vi~~a~~~~~------------------------------~~~~~~~~~~~~~~n~~~~~~l~~a~~~~  158 (355)
                          -++..|.|+-+||....                              ..-+.+.-.++++.||-|.--+++.+...
T Consensus        82 di~~rf~~ld~iylNAg~~~~~gi~w~~avf~~fsnpv~amt~pt~~~~t~G~is~D~lg~iFetnVFGhfyli~~l~pl  161 (341)
T KOG1478|consen   82 DIKQRFQRLDYIYLNAGIMPNPGINWKAAVFGLFSNPVIAMTSPTEGLLTQGKISADGLGEIFETNVFGHFYLIRELEPL  161 (341)
T ss_pred             HHHHHhhhccEEEEccccCCCCcccHHHHHHHHhhchhHHhcCchhhhhhcceecccchhhHhhhcccchhhhHhhhhhH
Confidence                34467999999985211                              01233445788999999977776655431


Q ss_pred             --CCCCCcEEEEeeeeeeeeCCCCCccccCCC---CCCChh-HHHHHHHHHHHHhccC---CCCeEEEEEecEEEeCC
Q 018503          159 --PEGVRPSVLVSATALGYYGTSETEVFDESS---PSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKD  227 (355)
Q Consensus       159 --~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~---~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~i~Rp~~i~G~~  227 (355)
                        .....++|++||..+     .....--|+-   .-..+| .+|...+.+.....+.   .|+.-.++.||......
T Consensus       162 l~~~~~~~lvwtSS~~a-----~kk~lsleD~q~~kg~~pY~sSKrl~DlLh~A~~~~~~~~g~~qyvv~pg~~tt~~  234 (341)
T KOG1478|consen  162 LCHSDNPQLVWTSSRMA-----RKKNLSLEDFQHSKGKEPYSSSKRLTDLLHVALNRNFKPLGINQYVVQPGIFTTNS  234 (341)
T ss_pred             hhcCCCCeEEEEeeccc-----ccccCCHHHHhhhcCCCCcchhHHHHHHHHHHHhccccccchhhhcccCceeecch
Confidence              123448999999765     2221111211   123456 6777666665554443   26778888888776653

>PLN02968 Probable N-acetyl-gamma-glutamyl-phosphate reductase

Probab=98.09  E-value=2.4e-05  Score=71.02  Aligned_cols=100  Identities=16%  Similarity=0.152  Sum_probs=63.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhC-CCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhh-hcCCCcEEEECCCC
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQAD-NHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRD-CIQGSTAVVNLAGT  126 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~-~~~~~d~vi~~a~~  126 (355)
                      ++|||+|.||||++|+.|++.|.++ +++|..+.+..+..+.......  .....+..+.+.++. .++++|+||.+.+.
T Consensus        37 ~~~kVaIvGATG~vG~eLlrlL~~hP~~el~~l~s~~saG~~i~~~~~--~l~~~~~~~~~~~~~~~~~~~DvVf~Alp~  114 (381)
T PLN02968         37 EKKRIFVLGASGYTGAEVRRLLANHPDFEITVMTADRKAGQSFGSVFP--HLITQDLPNLVAVKDADFSDVDAVFCCLPH  114 (381)
T ss_pred             cccEEEEECCCChHHHHHHHHHHhCCCCeEEEEEChhhcCCCchhhCc--cccCccccceecCCHHHhcCCCEEEEcCCH
Confidence            4579999999999999999999998 6899999886544332211100  011123332333332 25789999998752


Q ss_pred             CCCCCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeee
Q 018503          127 PIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATAL  173 (355)
Q Consensus       127 ~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~  173 (355)
                                         .....++..+..   + .++|-+|+.+-
T Consensus       115 -------------------~~s~~i~~~~~~---g-~~VIDlSs~fR  138 (381)
T PLN02968        115 -------------------GTTQEIIKALPK---D-LKIVDLSADFR  138 (381)
T ss_pred             -------------------HHHHHHHHHHhC---C-CEEEEcCchhc
Confidence                               133455555533   4 57888888765

>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase

Probab=98.04  E-value=4.8e-06  Score=76.57  Aligned_cols=73  Identities=25%  Similarity=0.321  Sum_probs=54.5

Q ss_pred             EEEEcCCchHHHHHHHHHHhCC-C-eEEEEecCCchhhccCCC--CCCccCCCeeecCCcchhhhcCCCcEEEECCCC
Q 018503           53 VSVTGATGFIGRRLVQRLQADN-H-QVRVLTRSRSKAELIFPG--KKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT  126 (355)
Q Consensus        53 IlVtGatG~iG~~l~~~L~~~g-~-~V~~~~r~~~~~~~~~~~--~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~  126 (355)
                      |+|+|+ |++|+.+++.|.+.+ + +|++.+|+.++...+...  ........+|+.|.+++.++++++|+||||++.
T Consensus         1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~dvVin~~gp   77 (386)
T PF03435_consen    1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKLLGDRVEAVQVDVNDPESLAELLRGCDVVINCAGP   77 (386)
T ss_dssp             EEEE---SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT--TTTTEEEEE--TTTHHHHHHHHTTSSEEEE-SSG
T ss_pred             CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhccccceeEEEEecCCHHHHHHHHhcCCEEEECCcc
Confidence            799999 999999999999986 5 899999999886655431  111124457888999999999999999999985

Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.

>cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases

Probab=98.04  E-value=7.9e-05  Score=65.61  Aligned_cols=112  Identities=14%  Similarity=0.190  Sum_probs=75.1

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhCC--CeEEEEecCCchhhccCCCCCCccCCCeeec---CCcchhhhcCCCcEEEECCC
Q 018503           51 MTVSVTGATGFIGRRLVQRLQADN--HQVRVLTRSRSKAELIFPGKKTRFFPGVMIA---EEPQWRDCIQGSTAVVNLAG  125 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~---~~~~~~~~~~~~d~vi~~a~  125 (355)
                      |||.|+|++|.+|++++-.|...+  .++..++.+......+.-...   .....+.   ..+++.+.++++|+||.+||
T Consensus         1 ~KI~IIGaaG~VG~~~a~~l~~~~~~~elvLiDi~~a~g~alDL~~~---~~~~~i~~~~~~~~~y~~~~daDivvitaG   77 (310)
T cd01337           1 VKVAVLGAAGGIGQPLSLLLKLNPLVSELALYDIVNTPGVAADLSHI---NTPAKVTGYLGPEELKKALKGADVVVIPAG   77 (310)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEecCccceeehHhHhC---CCcceEEEecCCCchHHhcCCCCEEEEeCC
Confidence            689999999999999999998887  489989887111111110000   1112333   22445677899999999999


Q ss_pred             CCCCCCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEe
Q 018503          126 TPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVS  169 (355)
Q Consensus       126 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~S  169 (355)
                      .+..   ....-.+.++.|....+.+.+.+.+. .....++.+|
T Consensus        78 ~~~k---~g~tR~dll~~N~~i~~~i~~~i~~~-~p~a~vivvt  117 (310)
T cd01337          78 VPRK---PGMTRDDLFNINAGIVRDLATAVAKA-CPKALILIIS  117 (310)
T ss_pred             CCCC---CCCCHHHHHHHHHHHHHHHHHHHHHh-CCCeEEEEcc
Confidence            7522   23345688899999999999999884 2233444444

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal

Probab=98.02  E-value=1.5e-05  Score=67.14  Aligned_cols=68  Identities=19%  Similarity=0.355  Sum_probs=47.6

Q ss_pred             EEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhc-------CCCcEEEECC
Q 018503           52 TVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCI-------QGSTAVVNLA  124 (355)
Q Consensus        52 ~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~-------~~~d~vi~~a  124 (355)
                      |.+=-.++|.+|+++++.|+++|++|+++++.... .   ...    ...+|+.+.+++.+++       .++|++||+|
T Consensus        17 R~itN~SSGgIG~AIA~~la~~Ga~Vvlv~~~~~l-~---~~~----~~~~Dv~d~~s~~~l~~~v~~~~g~iDiLVnnA   88 (227)
T TIGR02114        17 RSITNHSTGHLGKIITETFLSAGHEVTLVTTKRAL-K---PEP----HPNLSIREIETTKDLLITLKELVQEHDILIHSM   88 (227)
T ss_pred             eeecCCcccHHHHHHHHHHHHCCCEEEEEcChhhc-c---ccc----CCcceeecHHHHHHHHHHHHHHcCCCCEEEECC
Confidence            44444569999999999999999999998763211 1   100    2246887766555443       4689999999


Q ss_pred             CCC
Q 018503          125 GTP  127 (355)
Q Consensus       125 ~~~  127 (355)
                      |..
T Consensus        89 gv~   91 (227)
T TIGR02114        89 AVS   91 (227)
T ss_pred             Eec
Confidence            964

In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity.

>COG0623 FabI Enoyl-[acyl-carrier-protein]

Probab=98.02  E-value=0.00058  Score=55.99  Aligned_cols=217  Identities=12%  Similarity=0.056  Sum_probs=123.2

Q ss_pred             CCCEEEEEcCCc--hHHHHHHHHHHhCCCeEEEEecCCch---hhccCCCCCCccCCCeeecCCcchhhhcC-------C
Q 018503           49 SQMTVSVTGATG--FIGRRLVQRLQADNHQVRVLTRSRSK---AELIFPGKKTRFFPGVMIAEEPQWRDCIQ-------G  116 (355)
Q Consensus        49 ~~~~IlVtGatG--~iG~~l~~~L~~~g~~V~~~~r~~~~---~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-------~  116 (355)
                      .+|++||+|-.-  -|+..|++.|.+.|.++......+.-   ..++.+.........+|+.+.++++++++       +
T Consensus         5 ~GK~~lI~Gvan~rSIAwGIAk~l~~~GAeL~fTy~~e~l~krv~~la~~~~s~~v~~cDV~~d~~i~~~f~~i~~~~g~   84 (259)
T COG0623           5 EGKRILIMGVANNRSIAWGIAKALAEQGAELAFTYQGERLEKRVEELAEELGSDLVLPCDVTNDESIDALFATIKKKWGK   84 (259)
T ss_pred             CCceEEEEEecccccHHHHHHHHHHHcCCEEEEEeccHHHHHHHHHHHhhccCCeEEecCCCCHHHHHHHHHHHHHhhCc
Confidence            468999999755  79999999999999998877766532   22222222111234579998888877763       6


Q ss_pred             CcEEEECCCCCCC-------CCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCCCCccccCCCC
Q 018503          117 STAVVNLAGTPIG-------TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSP  189 (355)
Q Consensus       117 ~d~vi~~a~~~~~-------~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~  189 (355)
                      .|.++|+.+....       .+.+.+.....+++...+...+.++++..-.+...++-++=     +|...-      -|
T Consensus        85 lD~lVHsIaFa~k~el~G~~~dtsre~f~~a~~IS~YS~~~lak~a~~lM~~ggSiltLtY-----lgs~r~------vP  153 (259)
T COG0623          85 LDGLVHSIAFAPKEELKGDYLDTSREGFLIAMDISAYSFTALAKAARPLMNNGGSILTLTY-----LGSERV------VP  153 (259)
T ss_pred             ccEEEEEeccCChHHhCCcccccCHHHHHhHhhhhHhhHHHHHHHHHHhcCCCCcEEEEEe-----ccceee------cC
Confidence            8999999997531       12334445555666666677777777664233344444431     232111      11


Q ss_pred             CCChh-HHHHHHHHHHHHhccCC---CCeEEEEEecEEEe---CCCCcccchHHHHHHHhCCCCCCCCcceecccHHHHH
Q 018503          190 SGNDY-LAEVCREWEGTALKVNK---DVRLALIRIGIVLG---KDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIV  262 (355)
Q Consensus       190 ~~~~y-~~k~~~~~~~~~~~~~~---~~~~~i~Rp~~i~G---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva  262 (355)
                      ..+.. ..|...|.-........   |+++..+-.|.|=.   .+-+.+..++...  ...-|+      +.-+.++||+
T Consensus       154 nYNvMGvAKAaLEasvRyLA~dlG~~gIRVNaISAGPIrTLAasgI~~f~~~l~~~--e~~aPl------~r~vt~eeVG  225 (259)
T COG0623         154 NYNVMGVAKAALEASVRYLAADLGKEGIRVNAISAGPIRTLAASGIGDFRKMLKEN--EANAPL------RRNVTIEEVG  225 (259)
T ss_pred             CCchhHHHHHHHHHHHHHHHHHhCccCeEEeeecccchHHHHhhccccHHHHHHHH--HhhCCc------cCCCCHHHhh
Confidence            22233 66766666666555543   44444444333321   1112222222221  111122      2356799999


Q ss_pred             HHHHHHHhCCC---CCCceEecCCC
Q 018503          263 NLIYEALSNPS---YRGVINGTAPN  284 (355)
Q Consensus       263 ~~~~~~~~~~~---~~~~~~i~~~~  284 (355)
                      +..+.++..-.   .+++.++.+|-
T Consensus       226 ~tA~fLlSdLssgiTGei~yVD~G~  250 (259)
T COG0623         226 NTAAFLLSDLSSGITGEIIYVDSGY  250 (259)
T ss_pred             hhHHHHhcchhcccccceEEEcCCc
Confidence            99888887533   45566666653

>PRK05671 aspartate-semialdehyde dehydrogenase; Reviewed

Probab=98.00  E-value=6.2e-05  Score=67.12  Aligned_cols=69  Identities=25%  Similarity=0.331  Sum_probs=44.6

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCC---eEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcCCCcEEEECCC
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNH---QVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG  125 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~  125 (355)
                      +++|+|+||||++|+.|++.|.+++|   ++..+....+..+.+...     ...+++.+.+.. + ++++|+||.+++
T Consensus         4 ~~~IaIvGATG~vG~eLlrlL~~~~hP~~~l~~v~s~~~aG~~l~~~-----~~~l~~~~~~~~-~-~~~vD~vFla~p   75 (336)
T PRK05671          4 PLDIAVVGATGTVGEALVQILEERDFPVGTLHLLASSESAGHSVPFA-----GKNLRVREVDSF-D-FSQVQLAFFAAG   75 (336)
T ss_pred             CCEEEEEccCCHHHHHHHHHHhhCCCCceEEEEEECcccCCCeeccC-----CcceEEeeCChH-H-hcCCCEEEEcCC
Confidence            37999999999999999999998765   444444333222222111     123455544433 2 478999999875

>KOG2733 consensus Uncharacterized membrane protein [Function unknown]

Probab=97.96  E-value=5.6e-06  Score=71.67  Aligned_cols=75  Identities=20%  Similarity=0.304  Sum_probs=59.6

Q ss_pred             EEEEEcCCchHHHHHHHHHHh----CCCeEEEEecCCchhhccCCCCC--------CccCCCeeecCCcchhhhcCCCcE
Q 018503           52 TVSVTGATGFIGRRLVQRLQA----DNHQVRVLTRSRSKAELIFPGKK--------TRFFPGVMIAEEPQWRDCIQGSTA  119 (355)
Q Consensus        52 ~IlVtGatG~iG~~l~~~L~~----~g~~V~~~~r~~~~~~~~~~~~~--------~~~~~~~d~~~~~~~~~~~~~~d~  119 (355)
                      .+.|.|||||.|..+++.+.+    .|...-+..|+..+....+....        ......+|..|++++.++.+.+.+
T Consensus         7 DvVIyGASGfTG~yivee~v~~~~~~~~slavAGRn~~KL~~vL~~~~~k~~~~ls~~~i~i~D~~n~~Sl~emak~~~v   86 (423)
T KOG2733|consen    7 DVVIYGASGFTGKYIVEEAVSSQVFEGLSLAVAGRNEKKLQEVLEKVGEKTGTDLSSSVILIADSANEASLDEMAKQARV   86 (423)
T ss_pred             eEEEEccccccceeeHHHHhhhhcccCceEEEecCCHHHHHHHHHHHhhccCCCcccceEEEecCCCHHHHHHHHhhhEE
Confidence            589999999999999999999    57889999999887654432111        001223678899999999999999


Q ss_pred             EEECCCC
Q 018503          120 VVNLAGT  126 (355)
Q Consensus       120 vi~~a~~  126 (355)
                      |+||+|+
T Consensus        87 ivN~vGP   93 (423)
T KOG2733|consen   87 IVNCVGP   93 (423)
T ss_pred             EEecccc
Confidence            9999996

>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases

Probab=97.92  E-value=1.1e-05  Score=62.26  Aligned_cols=75  Identities=19%  Similarity=0.189  Sum_probs=57.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCe-EEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcCCCcEEEECCCCC
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQ-VRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTP  127 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~-V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~~  127 (355)
                      ..++++|+|+ |..|+.++..|.+.|.+ |+++.|+.++...+.....   ...+.+.+.+++.+.+.++|+||++.+..
T Consensus        11 ~~~~vlviGa-Gg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~---~~~~~~~~~~~~~~~~~~~DivI~aT~~~   86 (135)
T PF01488_consen   11 KGKRVLVIGA-GGAARAVAAALAALGAKEITIVNRTPERAEALAEEFG---GVNIEAIPLEDLEEALQEADIVINATPSG   86 (135)
T ss_dssp             TTSEEEEESS-SHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHT---GCSEEEEEGGGHCHHHHTESEEEE-SSTT
T ss_pred             CCCEEEEECC-HHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcC---ccccceeeHHHHHHHHhhCCeEEEecCCC
Confidence            3479999995 99999999999999975 9999999887666543311   22356667777778888999999998753

Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....

>PRK14874 aspartate-semialdehyde dehydrogenase; Provisional

Probab=97.92  E-value=5.7e-05  Score=67.69  Aligned_cols=69  Identities=25%  Similarity=0.322  Sum_probs=46.8

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhCCC---eEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcCCCcEEEECCCC
Q 018503           51 MTVSVTGATGFIGRRLVQRLQADNH---QVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT  126 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~  126 (355)
                      |+|+|+||||++|+.|++.|.+++|   ++.++.+..+....+...     ...+.+.|.+.  ..++++|+||.+++.
T Consensus         2 ~~V~IvGAtG~vG~~l~~lL~~~~hp~~~l~~l~s~~~~g~~l~~~-----g~~i~v~d~~~--~~~~~vDvVf~A~g~   73 (334)
T PRK14874          2 YNVAVVGATGAVGREMLNILEERNFPVDKLRLLASARSAGKELSFK-----GKELKVEDLTT--FDFSGVDIALFSAGG   73 (334)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCcceEEEEEccccCCCeeeeC-----CceeEEeeCCH--HHHcCCCEEEECCCh
Confidence            6899999999999999999999876   558887765544433211     11122323322  234689999999763

>COG3268 Uncharacterized conserved protein [Function unknown]

Probab=97.92  E-value=1.8e-05  Score=68.07  Aligned_cols=77  Identities=16%  Similarity=0.205  Sum_probs=61.3

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcCCCcEEEECCCCC
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTP  127 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~~  127 (355)
                      ...++|.||+||.|..++++|..+|.+-....|+..+...+....... ...+.+.+++.+++++.+.++|+||+|..
T Consensus         6 e~d~iiYGAtGy~G~lvae~l~~~g~~~aLAgRs~~kl~~l~~~LG~~-~~~~p~~~p~~~~~~~~~~~VVlncvGPy   82 (382)
T COG3268           6 EYDIIIYGATGYAGGLVAEYLAREGLTAALAGRSSAKLDALRASLGPE-AAVFPLGVPAALEAMASRTQVVLNCVGPY   82 (382)
T ss_pred             ceeEEEEccccchhHHHHHHHHHcCCchhhccCCHHHHHHHHHhcCcc-ccccCCCCHHHHHHHHhcceEEEeccccc
Confidence            347999999999999999999999999988899988876543322100 33455666889999999999999999964

>PRK05442 malate dehydrogenase; Provisional

Probab=97.91  E-value=0.00013  Score=64.80  Aligned_cols=116  Identities=19%  Similarity=0.251  Sum_probs=74.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCC-------eEEEEecCCch--hhccCCCCCCc---cCCCeeecCCcchhhhcCC
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNH-------QVRVLTRSRSK--AELIFPGKKTR---FFPGVMIAEEPQWRDCIQG  116 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~-------~V~~~~r~~~~--~~~~~~~~~~~---~~~~~d~~~~~~~~~~~~~  116 (355)
                      .++||.|+|++|.+|++++..|...|.       ++..+++.+..  ...........   ....+.+.  ....+.+++
T Consensus         3 ~~~KV~IiGaaG~VG~~~a~~l~~~~~~~~~~~~el~LiDi~~~~~~~~g~a~Dl~~~~~~~~~~~~i~--~~~y~~~~d   80 (326)
T PRK05442          3 APVRVAVTGAAGQIGYSLLFRIASGDMLGKDQPVILQLLEIPPALKALEGVVMELDDCAFPLLAGVVIT--DDPNVAFKD   80 (326)
T ss_pred             CCcEEEEECCCcHHHHHHHHHHHhhhhcCCCCccEEEEEecCCcccccceeehhhhhhhhhhcCCcEEe--cChHHHhCC
Confidence            346999999999999999999987653       78888886532  11111100000   01122232  233466789


Q ss_pred             CcEEEECCCCCCCCCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEe
Q 018503          117 STAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVS  169 (355)
Q Consensus       117 ~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~S  169 (355)
                      +|+||.+||.+..   ...+-.+.+..|....+.+.+.+.++......++.+|
T Consensus        81 aDiVVitaG~~~k---~g~tR~dll~~Na~i~~~i~~~i~~~~~~~~iiivvs  130 (326)
T PRK05442         81 ADVALLVGARPRG---PGMERKDLLEANGAIFTAQGKALNEVAARDVKVLVVG  130 (326)
T ss_pred             CCEEEEeCCCCCC---CCCcHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeC
Confidence            9999999997422   2345678889999999999999888422234455554

>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]

Probab=97.86  E-value=5.2e-05  Score=57.49  Aligned_cols=73  Identities=14%  Similarity=0.182  Sum_probs=44.7

Q ss_pred             CEEEEEcCCchHHHHHHHHHHh-CCCeEEEEe-cCCchhhccCCCCCCccCCCeeecCCcchhhhcCCCcEEEECC
Q 018503           51 MTVSVTGATGFIGRRLVQRLQA-DNHQVRVLT-RSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLA  124 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~-~g~~V~~~~-r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a  124 (355)
                      |||.|.|++|.+|+.+++.+.+ .++++.+.. |+++.... .............+.-.+++++++..+|++|.+.
T Consensus         1 mrV~i~G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~~~~~g-~d~g~~~~~~~~~~~v~~~l~~~~~~~DVvIDfT   75 (124)
T PF01113_consen    1 MRVGIVGASGRMGRAIAEAILESPGFELVGAVDRKPSAKVG-KDVGELAGIGPLGVPVTDDLEELLEEADVVIDFT   75 (124)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHSTTEEEEEEEETTTSTTTT-SBCHHHCTSST-SSBEBS-HHHHTTH-SEEEEES
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCCcEEEEEEecCCccccc-chhhhhhCcCCcccccchhHHHhcccCCEEEEcC
Confidence            6899999999999999999999 588877654 44422110 0000000001122223467888888899999885

In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....

>TIGR01772 MDH_euk_gproteo malate dehydrogenase, NAD-dependent

Probab=97.85  E-value=0.00026  Score=62.50  Aligned_cols=101  Identities=19%  Similarity=0.230  Sum_probs=70.4

Q ss_pred             EEEEEcCCchHHHHHHHHHHhCCC--eEEEEecCCchhhccCCCCCCccCCCeeecC---CcchhhhcCCCcEEEECCCC
Q 018503           52 TVSVTGATGFIGRRLVQRLQADNH--QVRVLTRSRSKAELIFPGKKTRFFPGVMIAE---EPQWRDCIQGSTAVVNLAGT  126 (355)
Q Consensus        52 ~IlVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~---~~~~~~~~~~~d~vi~~a~~  126 (355)
                      ||.|+|++|.+|++++-.|...+.  ++..+++++.....+.-...   .....+..   .+++.+.++++|+||.+||.
T Consensus         1 KV~IiGaaG~VG~~~a~~l~~~~~~~elvL~Di~~a~g~a~DL~~~---~~~~~i~~~~~~~~~~~~~~daDivvitaG~   77 (312)
T TIGR01772         1 KVAVLGAAGGIGQPLSLLLKLQPYVSELSLYDIAGAAGVAADLSHI---PTAASVKGFSGEEGLENALKGADVVVIPAGV   77 (312)
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCcEEEEecCCCCcEEEchhhcC---CcCceEEEecCCCchHHHcCCCCEEEEeCCC
Confidence            589999999999999999988874  88989887622221111100   11123331   23456788999999999997


Q ss_pred             CCCCCCChhhHHHHHHHhhhhHHHHHHHHHcC
Q 018503          127 PIGTRWSSEIKKEIKESRIRVTSKVVDLINES  158 (355)
Q Consensus       127 ~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~  158 (355)
                      +..   ......+.+..|..-.+.+.+.+.+.
T Consensus        78 ~~~---~g~~R~dll~~N~~I~~~i~~~i~~~  106 (312)
T TIGR01772        78 PRK---PGMTRDDLFNVNAGIVKDLVAAVAES  106 (312)
T ss_pred             CCC---CCccHHHHHHHhHHHHHHHHHHHHHh
Confidence            532   23345678889999999999988884

Although malate dehydrogenases have in some cases been mistaken for lactate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of lactate dehydrogenases.

>TIGR01759 MalateDH-SF1 malate dehydrogenase

Probab=97.85  E-value=0.0002  Score=63.64  Aligned_cols=115  Identities=16%  Similarity=0.205  Sum_probs=74.5

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCC-------eEEEEecCCch--hhccCCCCCC---ccCCCeeecCCcchhhhcCCC
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNH-------QVRVLTRSRSK--AELIFPGKKT---RFFPGVMIAEEPQWRDCIQGS  117 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~-------~V~~~~r~~~~--~~~~~~~~~~---~~~~~~d~~~~~~~~~~~~~~  117 (355)
                      +.||.|+|++|++|++++..|+..|.       ++..++.....  ..........   .......+.  ..-.+.++++
T Consensus         3 p~KV~IIGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~i~--~~~~~~~~da   80 (323)
T TIGR01759         3 PVRVAVTGAAGQIGYSLLFRIASGELFGKDQPVVLHLLDIPPAMKALEGVAMELEDCAFPLLAGVVAT--TDPEEAFKDV   80 (323)
T ss_pred             CeEEEEECCCcHHHHHHHHHHHhCCcccCCCccEEEEEecCCcccccchHHHHHhhccccccCCcEEe--cChHHHhCCC
Confidence            46899999999999999999998873       79889886522  1111100000   001112222  2334667899


Q ss_pred             cEEEECCCCCCCCCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEe
Q 018503          118 TAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVS  169 (355)
Q Consensus       118 d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~S  169 (355)
                      |+||.+||.+..   ...+..+.+..|....+.+.+.+.+++.....++.+|
T Consensus        81 DvVVitAG~~~k---~g~tR~dll~~Na~i~~~i~~~i~~~~~~~~iiivvs  129 (323)
T TIGR01759        81 DAALLVGAFPRK---PGMERADLLSKNGKIFKEQGKALNKVAKKDVKVLVVG  129 (323)
T ss_pred             CEEEEeCCCCCC---CCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEeC
Confidence            999999997522   2345568889999999999999988422133444444

This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms.

>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate

Probab=97.81  E-value=4.9e-05  Score=57.44  Aligned_cols=72  Identities=18%  Similarity=0.255  Sum_probs=42.7

Q ss_pred             EEEEEcCCchHHHHHHHHHHhCC-CeEEEEecCCc-hhhccCCCCC-CccCCCeeecCCcchhhhcCCCcEEEECCC
Q 018503           52 TVSVTGATGFIGRRLVQRLQADN-HQVRVLTRSRS-KAELIFPGKK-TRFFPGVMIAEEPQWRDCIQGSTAVVNLAG  125 (355)
Q Consensus        52 ~IlVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~-~~~~~~~~~~-~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~  125 (355)
                      ||.|+||||++|+.|++.|.++. .++..+..+.. ....+..... ......+.+.+  .-.+.+.++|+||.|.+
T Consensus         1 rV~IvGAtG~vG~~l~~lL~~hp~~e~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dvvf~a~~   75 (121)
T PF01118_consen    1 RVAIVGATGYVGRELLRLLAEHPDFELVALVSSSRSAGKPLSEVFPHPKGFEDLSVED--ADPEELSDVDVVFLALP   75 (121)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTSTEEEEEEEESTTTTTSBHHHTTGGGTTTEEEBEEE--TSGHHHTTESEEEE-SC
T ss_pred             CEEEECCCCHHHHHHHHHHhcCCCccEEEeeeeccccCCeeehhccccccccceeEee--cchhHhhcCCEEEecCc
Confidence            69999999999999999999964 56666555444 3322221100 00011223323  22233488999999975

This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....

>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]

Probab=97.79  E-value=8.5e-05  Score=62.57  Aligned_cols=74  Identities=22%  Similarity=0.378  Sum_probs=56.8

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhh-cCCCcEEEECCC
Q 018503           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDC-IQGSTAVVNLAG  125 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~-~~~~d~vi~~a~  125 (355)
                      |+++|.| .|.+|+++++.|.+.||+|++++++++.................|-++++.+.++ +.++|+++-+.+
T Consensus         1 m~iiIiG-~G~vG~~va~~L~~~g~~Vv~Id~d~~~~~~~~~~~~~~~~v~gd~t~~~~L~~agi~~aD~vva~t~   75 (225)
T COG0569           1 MKIIIIG-AGRVGRSVARELSEEGHNVVLIDRDEERVEEFLADELDTHVVIGDATDEDVLEEAGIDDADAVVAATG   75 (225)
T ss_pred             CEEEEEC-CcHHHHHHHHHHHhCCCceEEEEcCHHHHHHHhhhhcceEEEEecCCCHHHHHhcCCCcCCEEEEeeC
Confidence            6899999 7999999999999999999999999988665332111001233566788888877 578999998876

>PRK00066 ldh L-lactate dehydrogenase; Reviewed

Probab=97.78  E-value=0.00022  Score=63.29  Aligned_cols=103  Identities=18%  Similarity=0.236  Sum_probs=71.3

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCC--eEEEEecCCchhhccCCCCC--CccCCCeeecCCcchhhhcCCCcEEEECCC
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNH--QVRVLTRSRSKAELIFPGKK--TRFFPGVMIAEEPQWRDCIQGSTAVVNLAG  125 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~--~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~  125 (355)
                      ++||.|+|+ |.+|.+++-.|+..|.  ++..++++.+..........  ......+.+.. +.. +.++++|+||.+||
T Consensus         6 ~~ki~iiGa-G~vG~~~a~~l~~~~~~~el~L~D~~~~~~~g~~~Dl~~~~~~~~~~~i~~-~~~-~~~~~adivIitag   82 (315)
T PRK00066          6 HNKVVLVGD-GAVGSSYAYALVNQGIADELVIIDINKEKAEGDAMDLSHAVPFTSPTKIYA-GDY-SDCKDADLVVITAG   82 (315)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCCchhHHHHHHHHhhccccCCeEEEe-CCH-HHhCCCCEEEEecC
Confidence            469999997 9999999999999886  89999997765332211100  00011233432 333 45789999999999


Q ss_pred             CCCCCCCChhhHHHHHHHhhhhHHHHHHHHHcC
Q 018503          126 TPIGTRWSSEIKKEIKESRIRVTSKVVDLINES  158 (355)
Q Consensus       126 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~  158 (355)
                      .+..   ...+..+.+..|....+.+++.+.+.
T Consensus        83 ~~~k---~g~~R~dll~~N~~i~~~i~~~i~~~  112 (315)
T PRK00066         83 APQK---PGETRLDLVEKNLKIFKSIVGEVMAS  112 (315)
T ss_pred             CCCC---CCCCHHHHHHHHHHHHHHHHHHHHHh
Confidence            7532   22344688889999999999888873

>KOG1494 consensus NAD-dependent malate dehydrogenase [Energy production and conversion]

Probab=97.78  E-value=0.00022  Score=59.95  Aligned_cols=115  Identities=16%  Similarity=0.170  Sum_probs=73.5

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhCC--CeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcCCCcEEEECCCCCC
Q 018503           51 MTVSVTGATGFIGRRLVQRLQADN--HQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTPI  128 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~~~  128 (355)
                      -||.|.||+|.||+.|.-.|..+.  -+....+-...+.-.....-..+......+.-++.+.++++++|+|+--||.+.
T Consensus        29 ~KVAvlGAaGGIGQPLSLLlK~np~Vs~LaLYDi~~~~GVaaDlSHI~T~s~V~g~~g~~~L~~al~~advVvIPAGVPR  108 (345)
T KOG1494|consen   29 LKVAVLGAAGGIGQPLSLLLKLNPLVSELALYDIANTPGVAADLSHINTNSSVVGFTGADGLENALKGADVVVIPAGVPR  108 (345)
T ss_pred             ceEEEEecCCccCccHHHHHhcCcccceeeeeecccCCcccccccccCCCCceeccCChhHHHHHhcCCCEEEecCCCCC
Confidence            589999999999999988776442  133333333221111000000011122345557799999999999999999864


Q ss_pred             CCCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEe
Q 018503          129 GTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVS  169 (355)
Q Consensus       129 ~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~S  169 (355)
                      .+-..   -.++|++|..-.+.|..++.++ .....+.++|
T Consensus       109 KPGMT---RDDLFn~NAgIv~~l~~aia~~-cP~A~i~vIs  145 (345)
T KOG1494|consen  109 KPGMT---RDDLFNINAGIVKTLAAAIAKC-CPNALILVIS  145 (345)
T ss_pred             CCCCc---HHHhhhcchHHHHHHHHHHHhh-CccceeEeec
Confidence            33322   3588999999999999998885 2333455665

>PRK00436 argC N-acetyl-gamma-glutamyl-phosphate reductase; Validated

Probab=97.74  E-value=0.00023  Score=64.09  Aligned_cols=74  Identities=16%  Similarity=0.220  Sum_probs=46.1

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhC-CCeEEEEecCCchhhccCCCCC-CccCCCeeecCCcchhhhcCCCcEEEECCC
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQAD-NHQVRVLTRSRSKAELIFPGKK-TRFFPGVMIAEEPQWRDCIQGSTAVVNLAG  125 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~  125 (355)
                      +|||+|+||||++|+.+++.|.+. ++++.++.+..+.......... .......++.+.+..  ...++|+||.|..
T Consensus         2 m~kVaIiGAtG~vG~~l~~~L~~~p~~elv~v~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~--~~~~vD~Vf~alP   77 (343)
T PRK00436          2 MIKVGIVGASGYTGGELLRLLLNHPEVEIVAVTSRSSAGKPLSDVHPHLRGLVDLVLEPLDPE--ILAGADVVFLALP   77 (343)
T ss_pred             CeEEEEECCCCHHHHHHHHHHHcCCCceEEEEECccccCcchHHhCcccccccCceeecCCHH--HhcCCCEEEECCC
Confidence            479999999999999999999987 6888887764333222111000 000112233333332  4468999998864

>PRK13656 trans-2-enoyl-CoA reductase; Provisional

Probab=97.74  E-value=5.6e-05  Score=67.69  Aligned_cols=78  Identities=12%  Similarity=-0.012  Sum_probs=54.2

Q ss_pred             CCCEEEEEcCCchHHHH--HHHHHHhCCCeEEEEecCCchh---------------hcc-CCCCCCccCCCeeecCCcch
Q 018503           49 SQMTVSVTGATGFIGRR--LVQRLQADNHQVRVLTRSRSKA---------------ELI-FPGKKTRFFPGVMIAEEPQW  110 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~--l~~~L~~~g~~V~~~~r~~~~~---------------~~~-~~~~~~~~~~~~d~~~~~~~  110 (355)
                      .++++||||+++.+|.+  +++.| +.|.+|+++++..+..               ... ...........+|+.+.+.+
T Consensus        40 ggK~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~G~~a~~i~~DVss~E~v  118 (398)
T PRK13656         40 GPKKVLVIGASSGYGLASRIAAAF-GAGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAAGLYAKSINGDAFSDEIK  118 (398)
T ss_pred             CCCEEEEECCCchHhHHHHHHHHH-HcCCeEEEEecCcchhhhcccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHH
Confidence            35799999999999999  89999 9999998888533111               111 11111111335688888776


Q ss_pred             hhhc-------CCCcEEEECCCCC
Q 018503          111 RDCI-------QGSTAVVNLAGTP  127 (355)
Q Consensus       111 ~~~~-------~~~d~vi~~a~~~  127 (355)
                      .+++       .++|++||++|.+
T Consensus       119 ~~lie~I~e~~G~IDiLVnSaA~~  142 (398)
T PRK13656        119 QKVIELIKQDLGQVDLVVYSLASP  142 (398)
T ss_pred             HHHHHHHHHhcCCCCEEEECCccC
Confidence            6554       3689999999986

>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases

Probab=97.69  E-value=0.00045  Score=61.30  Aligned_cols=112  Identities=19%  Similarity=0.213  Sum_probs=74.4

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhCC--CeEEEEecCCchhhccCCCCCCcc---CCCeeecCCcchhhhcCCCcEEEECCC
Q 018503           51 MTVSVTGATGFIGRRLVQRLQADN--HQVRVLTRSRSKAELIFPGKKTRF---FPGVMIAEEPQWRDCIQGSTAVVNLAG  125 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~---~~~~d~~~~~~~~~~~~~~d~vi~~a~  125 (355)
                      +||.|+| +|.+|+.++..|+..|  ++|+.++|+.+.............   .....+. .... +.++++|+||.++|
T Consensus         1 ~kI~IIG-aG~vG~~~a~~l~~~g~~~ei~l~D~~~~~~~~~a~dL~~~~~~~~~~~~i~-~~~~-~~l~~aDIVIitag   77 (306)
T cd05291           1 RKVVIIG-AGHVGSSFAYSLVNQGIADELVLIDINEEKAEGEALDLEDALAFLPSPVKIK-AGDY-SDCKDADIVVITAG   77 (306)
T ss_pred             CEEEEEC-CCHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHhHhhHHHHhhccCCCeEEE-cCCH-HHhCCCCEEEEccC
Confidence            3799999 5999999999999998  699999998876543322110000   0111222 1223 34689999999999


Q ss_pred             CCCCCCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEe
Q 018503          126 TPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVS  169 (355)
Q Consensus       126 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~S  169 (355)
                      .+..   ...+-.+.+..|....+.+.+.+++.+. ...++.+|
T Consensus        78 ~~~~---~g~~R~dll~~N~~i~~~~~~~i~~~~~-~~~vivvs  117 (306)
T cd05291          78 APQK---PGETRLDLLEKNAKIMKSIVPKIKASGF-DGIFLVAS  117 (306)
T ss_pred             CCCC---CCCCHHHHHHHHHHHHHHHHHHHHHhCC-CeEEEEec
Confidence            7532   2234468888999999999999988422 23444444

L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine

>PLN00112 malate dehydrogenase (NADP); Provisional

Probab=97.69  E-value=0.00037  Score=64.08  Aligned_cols=115  Identities=17%  Similarity=0.212  Sum_probs=76.3

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhC-------CC--eEEEEecCCchhhccCCCCCCc---cCCCeeecCCcchhhhcCCC
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQAD-------NH--QVRVLTRSRSKAELIFPGKKTR---FFPGVMIAEEPQWRDCIQGS  117 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~-------g~--~V~~~~r~~~~~~~~~~~~~~~---~~~~~d~~~~~~~~~~~~~~  117 (355)
                      .-||.|+|++|.+|.+++-.|+..       +.  ++..++++.+......-.....   ....+.+.. +. .+.++++
T Consensus       100 ~~KV~IIGAaG~VG~~~A~~L~~~~v~g~~~~i~~eLvliD~~~~~a~G~amDL~daa~~~~~~v~i~~-~~-ye~~kda  177 (444)
T PLN00112        100 LINVAVSGAAGMISNHLLFKLASGEVFGPDQPIALKLLGSERSKQALEGVAMELEDSLYPLLREVSIGI-DP-YEVFQDA  177 (444)
T ss_pred             CeEEEEECCCcHHHHHHHHHHHhcccccCCCCcccEEEEEcCCcchhHHHHHHHHHhhhhhcCceEEec-CC-HHHhCcC
Confidence            458999999999999999999987       54  7888898877654221110000   011222222 22 3667899


Q ss_pred             cEEEECCCCCCCCCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEe
Q 018503          118 TAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVS  169 (355)
Q Consensus       118 d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~S  169 (355)
                      |+||..||.+..   ...+-.+.++.|+...+.+...+.+.......+|.+|
T Consensus       178 DiVVitAG~prk---pG~tR~dLl~~N~~I~k~i~~~I~~~a~p~~ivIVVs  226 (444)
T PLN00112        178 EWALLIGAKPRG---PGMERADLLDINGQIFAEQGKALNEVASRNVKVIVVG  226 (444)
T ss_pred             CEEEECCCCCCC---CCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEcC
Confidence            999999997532   2334568889999999999999888212233455555

>COG0039 Mdh Malate/lactate dehydrogenases [Energy production and conversion]

Probab=97.63  E-value=0.0011  Score=57.83  Aligned_cols=103  Identities=21%  Similarity=0.285  Sum_probs=69.5

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhCC--CeEEEEecCCchhhccCCCCCCc---cCCCeeecCCcchhhhcCCCcEEEECCC
Q 018503           51 MTVSVTGATGFIGRRLVQRLQADN--HQVRVLTRSRSKAELIFPGKKTR---FFPGVMIAEEPQWRDCIQGSTAVVNLAG  125 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~---~~~~~d~~~~~~~~~~~~~~d~vi~~a~  125 (355)
                      |||.|+|+ |++|+.++-.|+.++  .++..++...+...-........   .....++..... -+.++++|+|+-+||
T Consensus         1 ~KVaviGa-G~VG~s~a~~l~~~~~~~el~LiDi~~~~~~G~a~DL~~~~~~~~~~~~i~~~~~-y~~~~~aDiVvitAG   78 (313)
T COG0039           1 MKVAVIGA-GNVGSSLAFLLLLQGLGSELVLIDINEEKAEGVALDLSHAAAPLGSDVKITGDGD-YEDLKGADIVVITAG   78 (313)
T ss_pred             CeEEEECC-ChHHHHHHHHHhcccccceEEEEEcccccccchhcchhhcchhccCceEEecCCC-hhhhcCCCEEEEeCC
Confidence            58999998 999999999998775  58999999844332111110000   011123333222 456789999999999


Q ss_pred             CCCCCCCChhhHHHHHHHhhhhHHHHHHHHHcC
Q 018503          126 TPIGTRWSSEIKKEIKESRIRVTSKVVDLINES  158 (355)
Q Consensus       126 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~  158 (355)
                      .+..+   ...-.+.++.|..-.+.+...+.+.
T Consensus        79 ~prKp---GmtR~DLl~~Na~I~~~i~~~i~~~  108 (313)
T COG0039          79 VPRKP---GMTRLDLLEKNAKIVKDIAKAIAKY  108 (313)
T ss_pred             CCCCC---CCCHHHHHHhhHHHHHHHHHHHHhh
Confidence            75332   2334588899999999999998883

>PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated

Probab=97.61  E-value=0.00033  Score=62.22  Aligned_cols=72  Identities=18%  Similarity=0.238  Sum_probs=49.5

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccC-----------CCCC------CccCCCeeecCCcchhhh
Q 018503           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIF-----------PGKK------TRFFPGVMIAEEPQWRDC  113 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-----------~~~~------~~~~~~~d~~~~~~~~~~  113 (355)
                      |+|.|+| +|.+|..++..|++.|++|++++|+++......           ....      ......++.  ..++.++
T Consensus         3 ~~V~VIG-~G~mG~~iA~~la~~G~~V~v~d~~~~~~~~~~~~~~~~l~~l~~~g~~~~~~~~~~~~~i~~--~~~~~~a   79 (308)
T PRK06129          3 GSVAIIG-AGLIGRAWAIVFARAGHEVRLWDADPAAAAAAPAYIAGRLEDLAAFDLLDGEAPDAVLARIRV--TDSLADA   79 (308)
T ss_pred             cEEEEEC-ccHHHHHHHHHHHHCCCeeEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCchhhHHHHhcCeEE--ECcHHHh
Confidence            5899999 899999999999999999999999976433211           1100      000001122  2356667


Q ss_pred             cCCCcEEEECCC
Q 018503          114 IQGSTAVVNLAG  125 (355)
Q Consensus       114 ~~~~d~vi~~a~  125 (355)
                      ++++|+|+.+..
T Consensus        80 ~~~ad~Vi~avp   91 (308)
T PRK06129         80 VADADYVQESAP   91 (308)
T ss_pred             hCCCCEEEECCc
Confidence            789999999864

>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic

Probab=97.59  E-value=0.00018  Score=65.42  Aligned_cols=103  Identities=13%  Similarity=0.144  Sum_probs=67.0

Q ss_pred             CCCCEEEEEcC----------------CchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcch-
Q 018503           48 ASQMTVSVTGA----------------TGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQW-  110 (355)
Q Consensus        48 ~~~~~IlVtGa----------------tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~-  110 (355)
                      ..+++|+||||                ||.+|.++++.|..+|++|+.+.+......   ...    ...+|+.+.+++ 
T Consensus       183 ~~~~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~Ga~V~~~~g~~~~~~---~~~----~~~~~v~~~~~~~  255 (390)
T TIGR00521       183 LEGKRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKRGADVTLITGPVSLLT---PPG----VKSIKVSTAEEML  255 (390)
T ss_pred             cCCceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHHCCCEEEEeCCCCccCC---CCC----cEEEEeccHHHHH
Confidence            34679999998                478999999999999999999887654321   111    234677777666 


Q ss_pred             hhhc----CCCcEEEECCCCCCCCCCC--hh-hH--HHHHHHhhhhHHHHHHHHHc
Q 018503          111 RDCI----QGSTAVVNLAGTPIGTRWS--SE-IK--KEIKESRIRVTSKVVDLINE  157 (355)
Q Consensus       111 ~~~~----~~~d~vi~~a~~~~~~~~~--~~-~~--~~~~~~n~~~~~~l~~a~~~  157 (355)
                      .+++    .++|++|++||........  .. ..  ...+..++.-+..++..+++
T Consensus       256 ~~~~~~~~~~~D~~i~~Aavsd~~~~~~~~~Ki~~~~~~~~l~L~~~pdil~~l~~  311 (390)
T TIGR00521       256 EAALNELAKDFDIFISAAAVADFKPKTVFEGKIKKQGEELSLKLVKNPDIIAEVRK  311 (390)
T ss_pred             HHHHHhhcccCCEEEEccccccccccccccccccccCCceeEEEEeCcHHHHHHHh
Confidence            4333    4689999999974221110  00 00  11223566667777777766

This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.

>PRK06223 malate dehydrogenase; Reviewed

Probab=97.57  E-value=0.0013  Score=58.40  Aligned_cols=113  Identities=18%  Similarity=0.172  Sum_probs=71.5

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhCCC-eEEEEecCCchhhccCCC---CCCccCCCeeecCCcchhhhcCCCcEEEECCCC
Q 018503           51 MTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRSKAELIFPG---KKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT  126 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~---~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~  126 (355)
                      |||.|+|+ |.+|..++..+...|. +|+.++++++........   ..........+....++ +.++++|+||.+++.
T Consensus         3 ~KI~VIGa-G~vG~~ia~~la~~~~~ev~L~D~~~~~~~~~~~dl~~~~~~~~~~~~i~~~~d~-~~~~~aDiVii~~~~   80 (307)
T PRK06223          3 KKISIIGA-GNVGATLAHLLALKELGDVVLFDIVEGVPQGKALDIAEAAPVEGFDTKITGTNDY-EDIAGSDVVVITAGV   80 (307)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCeEEEEEECCCchhHHHHHHHHhhhhhcCCCcEEEeCCCH-HHHCCCCEEEECCCC
Confidence            79999997 9999999999998875 999999977654221110   00000111233322334 347899999999986


Q ss_pred             CCCCCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEe
Q 018503          127 PIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVS  169 (355)
Q Consensus       127 ~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~S  169 (355)
                      +...   .....+.+..|+...+.+++.+.+. .....+|.++
T Consensus        81 p~~~---~~~r~~~~~~n~~i~~~i~~~i~~~-~~~~~viv~t  119 (307)
T PRK06223         81 PRKP---GMSRDDLLGINAKIMKDVAEGIKKY-APDAIVIVVT  119 (307)
T ss_pred             CCCc---CCCHHHHHHHHHHHHHHHHHHHHHH-CCCeEEEEec
Confidence            5322   2233466678888888888888773 1222355544

>TIGR01850 argC N-acetyl-gamma-glutamyl-phosphate reductase, common form

Probab=97.56  E-value=0.00041  Score=62.48  Aligned_cols=98  Identities=15%  Similarity=0.217  Sum_probs=57.4

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhC-CCeEEEE-ecCCchhhcc---CCCCCCccCCCeeecCCcchhhhcCCCcEEEECCC
Q 018503           51 MTVSVTGATGFIGRRLVQRLQAD-NHQVRVL-TRSRSKAELI---FPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG  125 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~-g~~V~~~-~r~~~~~~~~---~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~  125 (355)
                      |||+|+||||++|..+++.|.+. ++++..+ ++..+.....   .....  .....++.+. +..++.+++|+||.|..
T Consensus         1 ~kVaIiGATG~vG~ellr~L~~hP~~el~~l~~s~~sagk~~~~~~~~l~--~~~~~~~~~~-~~~~~~~~~DvVf~alP   77 (346)
T TIGR01850         1 IKVAIVGASGYTGGELLRLLLNHPEVEITYLVSSRESAGKPVSEVHPHLR--GLVDLNLEPI-DEEEIAEDADVVFLALP   77 (346)
T ss_pred             CEEEEECCCCHHHHHHHHHHHcCCCceEEEEeccchhcCCChHHhCcccc--ccCCceeecC-CHHHhhcCCCEEEECCC
Confidence            58999999999999999999987 6788855 4433222211   11000  0111223222 23444458999999875


Q ss_pred             CCCCCCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeee
Q 018503          126 TPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATAL  173 (355)
Q Consensus       126 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~  173 (355)
                      ..                   ....++..+.+  .+ +++|=.|+.+-
T Consensus        78 ~~-------------------~s~~~~~~~~~--~G-~~VIDlS~~fR  103 (346)
T TIGR01850        78 HG-------------------VSAELAPELLA--AG-VKVIDLSADFR  103 (346)
T ss_pred             ch-------------------HHHHHHHHHHh--CC-CEEEeCChhhh
Confidence            21                   22344555555  34 56777777643

This model represents the more common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and the gap architecture in a multiple sequence alignment. Bacterial members of this family tend to be found within Arg biosynthesis operons.

>PTZ00117 malate dehydrogenase; Provisional

Probab=97.56  E-value=0.0011  Score=59.10  Aligned_cols=116  Identities=16%  Similarity=0.152  Sum_probs=74.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCC-CeEEEEecCCchhhc--c-CCCCCCccCCCeeecCCcchhhhcCCCcEEEECC
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADN-HQVRVLTRSRSKAEL--I-FPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLA  124 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~--~-~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a  124 (355)
                      ..+||.|+|| |.+|+.++..|...| .+|..++++.+....  + .............+....+++ .++++|+||.++
T Consensus         4 ~~~KI~IIGa-G~vG~~ia~~l~~~~~~~l~L~Di~~~~~~g~~lDl~~~~~~~~~~~~i~~~~d~~-~l~~ADiVVita   81 (319)
T PTZ00117          4 KRKKISMIGA-GQIGSTVALLILQKNLGDVVLYDVIKGVPQGKALDLKHFSTLVGSNINILGTNNYE-DIKDSDVVVITA   81 (319)
T ss_pred             CCcEEEEECC-CHHHHHHHHHHHHCCCCeEEEEECCCccchhHHHHHhhhccccCCCeEEEeCCCHH-HhCCCCEEEECC
Confidence            3479999996 999999999999888 689999997754321  1 000000001112333334555 679999999999


Q ss_pred             CCCCCCCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEee
Q 018503          125 GTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSA  170 (355)
Q Consensus       125 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss  170 (355)
                      +.+....   ....+.+..|....+.+.+.+.+. .....++.+|.
T Consensus        82 g~~~~~g---~~r~dll~~n~~i~~~i~~~i~~~-~p~a~vivvsN  123 (319)
T PTZ00117         82 GVQRKEE---MTREDLLTINGKIMKSVAESVKKY-CPNAFVICVTN  123 (319)
T ss_pred             CCCCCCC---CCHHHHHHHHHHHHHHHHHHHHHH-CCCeEEEEecC
Confidence            8643222   223567778888888888888884 22223555543

>PRK08664 aspartate-semialdehyde dehydrogenase; Reviewed

Probab=97.54  E-value=0.00049  Score=62.17  Aligned_cols=37  Identities=35%  Similarity=0.581  Sum_probs=31.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCC-CeEEEEecCCc
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADN-HQVRVLTRSRS   85 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~   85 (355)
                      |++||+|+||||++|+.|++.|.+.. .+++++.++.+
T Consensus         2 ~~~~V~I~GatG~iG~~l~~~L~~~p~~el~~~~~s~~   39 (349)
T PRK08664          2 MKLKVGILGATGMVGQRFVQLLANHPWFEVTALAASER   39 (349)
T ss_pred             CCcEEEEECCCCHHHHHHHHHHHcCCCceEEEEEcChh
Confidence            45799999999999999999999875 48888856553

>cd05292 LDH_2 A subgroup of L-lactate dehydrogenases

Probab=97.53  E-value=0.00083  Score=59.56  Aligned_cols=100  Identities=22%  Similarity=0.346  Sum_probs=68.9

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhCC--CeEEEEecCCchhhc----cCCCCCCccCCCeeecCCcchhhhcCCCcEEEECC
Q 018503           51 MTVSVTGATGFIGRRLVQRLQADN--HQVRVLTRSRSKAEL----IFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLA  124 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~----~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a  124 (355)
                      |||.|+|+ |.+|..++..|+.+|  .+|..++++......    +.....  ......+. ..+. +.++++|+||.++
T Consensus         1 mkI~IIGa-G~VG~~~a~~l~~~g~~~ev~l~D~~~~~~~g~a~dl~~~~~--~~~~~~i~-~~d~-~~l~~aDiViita   75 (308)
T cd05292           1 MKVAIVGA-GFVGSTTAYALLLRGLASEIVLVDINKAKAEGEAMDLAHGTP--FVKPVRIY-AGDY-ADCKGADVVVITA   75 (308)
T ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCCEEEEEECCchhhhhHHHHHHcccc--ccCCeEEe-eCCH-HHhCCCCEEEEcc
Confidence            58999996 999999999999998  689999998764432    111100  01111222 1233 4578999999999


Q ss_pred             CCCCCCCCChhhHHHHHHHhhhhHHHHHHHHHcC
Q 018503          125 GTPIGTRWSSEIKKEIKESRIRVTSKVVDLINES  158 (355)
Q Consensus       125 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~  158 (355)
                      +.+..   ...+..+....|+...+.+.+.+.+.
T Consensus        76 ~~~~~---~~~~r~dl~~~n~~i~~~~~~~l~~~  106 (308)
T cd05292          76 GANQK---PGETRLDLLKRNVAIFKEIIPQILKY  106 (308)
T ss_pred             CCCCC---CCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence            86422   22334577888999999999888873

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed predominantly of bacterial LDHs and a few fungal LDHs. Bacterial LDHs may be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PF08338 DUF1731: Domain of unknown function (DUF1731); InterPro: IPR013549 This domain of unknown function appears towards the C terminus of proteins of the NAD dependent epimerase/dehydratase family (IPR001509 from INTERPRO) in bacteria, eukaryotes and archaea

Probab=97.51  E-value=5.5e-05  Score=46.25  Aligned_cols=48  Identities=46%  Similarity=0.780  Sum_probs=24.9

Q ss_pred             CcHHHHHHHhcccceeeecCccccchhHHhCCCCCCccCHHHHHHHHh
Q 018503          307 VPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPFKYRYVKDALKAIM  354 (355)
Q Consensus       307 ~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~lG~~p~~~~~~~~l~~~~  354 (355)
                      +|.+..+..+|++......+.++.+.|+.+.||+++|+++++++++++
T Consensus         1 vP~~~lkl~lGe~a~lll~~q~v~P~kL~~~GF~F~~p~l~~AL~~ll   48 (48)
T PF08338_consen    1 VPAFALKLLLGEMAELLLASQRVSPKKLLEAGFQFRYPTLEEALRDLL   48 (48)
T ss_dssp             -------------GGGGG-EEEE--HHHHHTT---S-SSHHHHHHH--
T ss_pred             CCHHHHHHHHHHHHHHHhCCCeecChHHHHCCCcccCCCHHHHHhccC
Confidence            366777778888888899999999999999999999999999999864

Many of the proteins in which it is found are involved in cell-division inhibition. ; PDB: 3OH8_A.

>PRK00048 dihydrodipicolinate reductase; Provisional

Probab=97.50  E-value=0.0013  Score=56.78  Aligned_cols=66  Identities=17%  Similarity=0.289  Sum_probs=47.1

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhC-CCeEEEEec-CCchhhccCCCCCCccCCCeeecCCcchhhhcCCCcEEEECCC
Q 018503           51 MTVSVTGATGFIGRRLVQRLQAD-NHQVRVLTR-SRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG  125 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~-g~~V~~~~r-~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~  125 (355)
                      |||+|+|++|.+|+.+++.+.+. +.++.++.. +++.....         ...++...+++.++++++|+||.++.
T Consensus         2 mkV~IiG~~G~mG~~i~~~l~~~~~~elvav~d~~~~~~~~~---------~~~~i~~~~dl~~ll~~~DvVid~t~   69 (257)
T PRK00048          2 IKVAVAGASGRMGRELIEAVEAAEDLELVAAVDRPGSPLVGQ---------GALGVAITDDLEAVLADADVLIDFTT   69 (257)
T ss_pred             cEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCcccccc---------CCCCccccCCHHHhccCCCEEEECCC
Confidence            79999999999999999998874 688887554 43332211         11233345667777778999998874

>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins

Probab=97.48  E-value=0.00022  Score=53.91  Aligned_cols=69  Identities=20%  Similarity=0.284  Sum_probs=40.7

Q ss_pred             cCCCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEe-cCCchhhccCCCCCCccCCCeeecCCcchhhhcCCCcEEEECC
Q 018503           47 KASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLT-RSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLA  124 (355)
Q Consensus        47 ~~~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~-r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a  124 (355)
                      ....+||-|+| +|.+|++|.+.|.+.||+|..+. |+..+.......     .......+   +.+.+..+|++|-+.
T Consensus         7 ~~~~l~I~iIG-aGrVG~~La~aL~~ag~~v~~v~srs~~sa~~a~~~-----~~~~~~~~---~~~~~~~aDlv~iav   76 (127)
T PF10727_consen    7 QAARLKIGIIG-AGRVGTALARALARAGHEVVGVYSRSPASAERAAAF-----IGAGAILD---LEEILRDADLVFIAV   76 (127)
T ss_dssp             -----EEEEEC-TSCCCCHHHHHHHHTTSEEEEESSCHH-HHHHHHC-------TT--------TTGGGCC-SEEEE-S
T ss_pred             CCCccEEEEEC-CCHHHHHHHHHHHHCCCeEEEEEeCCcccccccccc-----cccccccc---cccccccCCEEEEEe
Confidence            34458999999 59999999999999999999875 554443333222     22222223   345567889998875

This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.

>cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family

Probab=97.48  E-value=0.00063  Score=58.99  Aligned_cols=102  Identities=13%  Similarity=0.163  Sum_probs=70.7

Q ss_pred             EEEEcCCchHHHHHHHHHHhCC----CeEEEEecCCchhhccCCC---CCCccCCCeeecCCcchhhhcCCCcEEEECCC
Q 018503           53 VSVTGATGFIGRRLVQRLQADN----HQVRVLTRSRSKAELIFPG---KKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG  125 (355)
Q Consensus        53 IlVtGatG~iG~~l~~~L~~~g----~~V~~~~r~~~~~~~~~~~---~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~  125 (355)
                      |.|+||+|.+|..++..|+..|    .+|..++++.+........   .... .....+.-.++..+.++++|+||.+++
T Consensus         1 I~IIGagG~vG~~ia~~l~~~~~~~~~el~L~D~~~~~l~~~~~dl~~~~~~-~~~~~i~~~~d~~~~~~~aDiVv~t~~   79 (263)
T cd00650           1 IAVIGAGGNVGPALAFGLADGSVLLAIELVLYDIDEEKLKGVAMDLQDAVEP-LADIKVSITDDPYEAFKDADVVIITAG   79 (263)
T ss_pred             CEEECCCChHHHHHHHHHHhCCCCcceEEEEEeCCcccchHHHHHHHHhhhh-ccCcEEEECCchHHHhCCCCEEEECCC
Confidence            5799998999999999999988    7999999877553322111   0000 012344434556677899999999998


Q ss_pred             CCCCCCCChhhHHHHHHHhhhhHHHHHHHHHcC
Q 018503          126 TPIGTRWSSEIKKEIKESRIRVTSKVVDLINES  158 (355)
Q Consensus       126 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~  158 (355)
                      .+...   ..........|+...+.+.+.+++.
T Consensus        80 ~~~~~---g~~r~~~~~~n~~i~~~i~~~i~~~  109 (263)
T cd00650          80 VGRKP---GMGRLDLLKRNVPIVKEIGDNIEKY  109 (263)
T ss_pred             CCCCc---CCCHHHHHHHHHHHHHHHHHHHHHH
Confidence            74322   2233466778999999999988884

Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains

>PTZ00082 L-lactate dehydrogenase; Provisional

Probab=97.46  E-value=0.0021  Score=57.25  Aligned_cols=118  Identities=13%  Similarity=0.120  Sum_probs=73.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCC-eEEEEecCCchhhc--cC--CCCCCccCCCeeecCCcchhhhcCCCcEEEEC
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRSKAEL--IF--PGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNL  123 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~--~~--~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~  123 (355)
                      ..+||.|+| +|.+|..++..++..|. +|+.++.+++....  +.  .... .......+....++ +.++++|+||.+
T Consensus         5 ~~~KI~IIG-aG~vG~~ia~~la~~gl~~i~LvDi~~~~~~~~~ld~~~~~~-~~~~~~~I~~~~d~-~~l~~aDiVI~t   81 (321)
T PTZ00082          5 KRRKISLIG-SGNIGGVMAYLIVLKNLGDVVLFDIVKNIPQGKALDISHSNV-IAGSNSKVIGTNNY-EDIAGSDVVIVT   81 (321)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHhCCCCeEEEEeCCCchhhHHHHHHHhhhh-ccCCCeEEEECCCH-HHhCCCCEEEEC
Confidence            447999999 69999999999998885 89999998874321  10  0000 00111233322344 467899999999


Q ss_pred             CCCCCCCCC-C-hhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEee
Q 018503          124 AGTPIGTRW-S-SEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSA  170 (355)
Q Consensus       124 a~~~~~~~~-~-~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss  170 (355)
                      ++.+..... . .-...+.+..|+...+.+++.+.+.. ....++.+|-
T Consensus        82 ag~~~~~~~~~~~~~r~~~l~~n~~i~~~i~~~i~~~~-p~a~~iv~sN  129 (321)
T PTZ00082         82 AGLTKRPGKSDKEWNRDDLLPLNAKIMDEVAEGIKKYC-PNAFVIVITN  129 (321)
T ss_pred             CCCCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHHHHHC-CCeEEEEecC
Confidence            987532110 0 00235667788888888888888842 2224555553

>PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism

Probab=97.46  E-value=0.0004  Score=56.32  Aligned_cols=69  Identities=10%  Similarity=0.184  Sum_probs=39.8

Q ss_pred             EEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchh----hhcCCCcEEEECCCCC
Q 018503           52 TVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWR----DCIQGSTAVVNLAGTP  127 (355)
Q Consensus        52 ~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~----~~~~~~d~vi~~a~~~  127 (355)
                      |.+=--+||..|.+|++.+..+|++|+.+.....-..   +..    ...+++.+.+++.    +.+++.|++|++|++.
T Consensus        21 R~ItN~SSG~~G~~lA~~~~~~Ga~V~li~g~~~~~~---p~~----~~~i~v~sa~em~~~~~~~~~~~Di~I~aAAVs   93 (185)
T PF04127_consen   21 RFITNRSSGKMGAALAEEAARRGAEVTLIHGPSSLPP---PPG----VKVIRVESAEEMLEAVKELLPSADIIIMAAAVS   93 (185)
T ss_dssp             EEEEES--SHHHHHHHHHHHHTT-EEEEEE-TTS-------TT----EEEEE-SSHHHHHHHHHHHGGGGSEEEE-SB--
T ss_pred             eEecCCCcCHHHHHHHHHHHHCCCEEEEEecCccccc---ccc----ceEEEecchhhhhhhhccccCcceeEEEecchh
Confidence            3444445899999999999999999999998753211   100    2224444444443    3445789999999974

These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A.

>cd05293 LDH_1 A subgroup of L-lactate dehydrogenases

Probab=97.46  E-value=0.0019  Score=57.30  Aligned_cols=104  Identities=13%  Similarity=0.203  Sum_probs=69.9

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCC--CeEEEEecCCchhhccCCCC--CCccCCCeeecCCcchhhhcCCCcEEEECCC
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADN--HQVRVLTRSRSKAELIFPGK--KTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG  125 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~--~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~  125 (355)
                      .+||.|+|+ |.+|..++..|+..|  -++..++.+.+.........  .........+....+.+ .++++|+||.+||
T Consensus         3 ~~Ki~IiGa-G~VG~~~a~~l~~~~~~~el~LiD~~~~~~~g~a~Dl~~~~~~~~~~~v~~~~dy~-~~~~adivvitaG   80 (312)
T cd05293           3 RNKVTVVGV-GQVGMACAISILAKGLADELVLVDVVEDKLKGEAMDLQHGSAFLKNPKIEADKDYS-VTANSKVVIVTAG   80 (312)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHHHHHhhccCCCCEEEECCCHH-HhCCCCEEEECCC
Confidence            469999995 999999999999886  48999998775432111100  00001111333233444 3789999999999


Q ss_pred             CCCCCCCChhhHHHHHHHhhhhHHHHHHHHHcC
Q 018503          126 TPIGTRWSSEIKKEIKESRIRVTSKVVDLINES  158 (355)
Q Consensus       126 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~  158 (355)
                      .+..   ...+-.+.+..|....+.+.+.+.+.
T Consensus        81 ~~~k---~g~~R~dll~~N~~i~~~~~~~i~~~  110 (312)
T cd05293          81 ARQN---EGESRLDLVQRNVDIFKGIIPKLVKY  110 (312)
T ss_pred             CCCC---CCCCHHHHHHHHHHHHHHHHHHHHHh
Confidence            7422   22344678899999999999999884

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>COG2085 Predicted dinucleotide-binding enzymes [General function prediction only]

Probab=97.45  E-value=0.00022  Score=58.02  Aligned_cols=68  Identities=25%  Similarity=0.208  Sum_probs=46.9

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcCCCcEEEECCC
Q 018503           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG  125 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~  125 (355)
                      |+|.|.| +|.+|..|++.|.+.||+|+..+|+.++.........   .+.   ....+..++.+..|+||-..-
T Consensus         2 ~~~~i~G-tGniG~alA~~~a~ag~eV~igs~r~~~~~~a~a~~l---~~~---i~~~~~~dA~~~aDVVvLAVP   69 (211)
T COG2085           2 MIIAIIG-TGNIGSALALRLAKAGHEVIIGSSRGPKALAAAAAAL---GPL---ITGGSNEDAAALADVVVLAVP   69 (211)
T ss_pred             cEEEEec-cChHHHHHHHHHHhCCCeEEEecCCChhHHHHHHHhh---ccc---cccCChHHHHhcCCEEEEecc
Confidence            5666655 9999999999999999999999776654332221110   111   334566677888999998753

>PRK12548 shikimate 5-dehydrogenase; Provisional

Probab=97.44  E-value=0.0003  Score=61.82  Aligned_cols=77  Identities=14%  Similarity=0.125  Sum_probs=53.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCe-EEEEecCC---chhhccCCCC----CCccCCCeeecCCcchhhhcCCCcEE
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQ-VRVLTRSR---SKAELIFPGK----KTRFFPGVMIAEEPQWRDCIQGSTAV  120 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~-V~~~~r~~---~~~~~~~~~~----~~~~~~~~d~~~~~~~~~~~~~~d~v  120 (355)
                      +.++++|+|| |.+|++++..|.+.|++ |++++|+.   ++...+....    ........|+.+.+.+.+.++.+|+|
T Consensus       125 ~~k~vlI~GA-GGagrAia~~La~~G~~~V~I~~R~~~~~~~a~~l~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~Dil  203 (289)
T PRK12548        125 KGKKLTVIGA-GGAATAIQVQCALDGAKEITIFNIKDDFYERAEQTAEKIKQEVPECIVNVYDLNDTEKLKAEIASSDIL  203 (289)
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCchHHHHHHHHHHHHhhcCCCceeEEechhhhhHHHhhhccCCEE
Confidence            3468999997 89999999999999985 99999986   3333321110    00001224565666777777889999


Q ss_pred             EECCCC
Q 018503          121 VNLAGT  126 (355)
Q Consensus       121 i~~a~~  126 (355)
                      ||+...
T Consensus       204 INaTp~  209 (289)
T PRK12548        204 VNATLV  209 (289)
T ss_pred             EEeCCC
Confidence            998754

>TIGR01757 Malate-DH_plant malate dehydrogenase, NADP-dependent

Probab=97.40  E-value=0.00079  Score=60.97  Aligned_cols=115  Identities=16%  Similarity=0.223  Sum_probs=72.2

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCC-----eEEE--E--ecCCchhhccCCCCCCc---cCCCeeecCCcchhhhcCCC
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNH-----QVRV--L--TRSRSKAELIFPGKKTR---FFPGVMIAEEPQWRDCIQGS  117 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~-----~V~~--~--~r~~~~~~~~~~~~~~~---~~~~~d~~~~~~~~~~~~~~  117 (355)
                      +-||.|+|++|.+|.+++-.|...|.     +|..  +  +++.+............   ....+.+.. +. .+.++++
T Consensus        44 p~KV~IIGAaG~VG~~~A~~l~~~~l~~~~~ei~L~L~diD~~~~~a~g~a~DL~d~a~~~~~~v~i~~-~~-y~~~kda  121 (387)
T TIGR01757        44 TVNVAVSGAAGMISNHLLFMLASGEVFGQDQPIALKLLGSERSKEALEGVAMELEDSLYPLLREVSIGI-DP-YEVFEDA  121 (387)
T ss_pred             CeEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEeccCccchhhhHHHHHHHHhhhhhcCceEEec-CC-HHHhCCC
Confidence            46999999999999999999998753     2333  3  66555433211110000   011222222 22 3667899


Q ss_pred             cEEEECCCCCCCCCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEe
Q 018503          118 TAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVS  169 (355)
Q Consensus       118 d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~S  169 (355)
                      |+||.+||.+..   ...+-.+.+..|+...+.+...+.++......++.+|
T Consensus       122 DIVVitAG~prk---pg~tR~dll~~N~~I~k~i~~~I~~~a~~~~iviVVs  170 (387)
T TIGR01757       122 DWALLIGAKPRG---PGMERADLLDINGQIFADQGKALNAVASKNCKVLVVG  170 (387)
T ss_pred             CEEEECCCCCCC---CCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcC
Confidence            999999997532   2334568889999999999999988422333455555

This model represents the NADP-dependent malate dehydrogenase found in plants, mosses and green algae and localized to the chloroplast. Malate dehydrogenase converts oxaloacetate into malate, a critical step in the C4 cycle which allows circumvention of the effects of photorespiration. Malate is subsequenctly transported from the chloroplast to the cytoplasm (and then to the bundle sheath cells in C4 plants). The plant and moss enzymes are light regulated via cysteine disulfide bonds. The enzyme from Sorghum has been crystallized.

>PLN02383 aspartate semialdehyde dehydrogenase

Probab=97.38  E-value=0.00088  Score=60.09  Aligned_cols=70  Identities=20%  Similarity=0.322  Sum_probs=42.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCC---eEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcCCCcEEEECCC
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNH---QVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG  125 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~  125 (355)
                      +++||+|+||||++|+.|++.|.+++|   ++..+....+........     ...+.+.+.+  .+.+.++|+||.+++
T Consensus         6 ~~~kVaVvGAtG~vG~eLlrlL~~~~hP~~~l~~las~rsaGk~~~~~-----~~~~~v~~~~--~~~~~~~D~vf~a~p   78 (344)
T PLN02383          6 NGPSVAIVGVTGAVGQEFLSVLTDRDFPYSSLKMLASARSAGKKVTFE-----GRDYTVEELT--EDSFDGVDIALFSAG   78 (344)
T ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCCcceEEEEEccCCCCCeeeec-----CceeEEEeCC--HHHHcCCCEEEECCC
Confidence            347999999999999999999999877   444443332222221111     1112222211  133478999998886

>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1

Probab=97.37  E-value=0.00015  Score=57.99  Aligned_cols=66  Identities=20%  Similarity=0.241  Sum_probs=49.4

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcCCCcEEEECCC
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG  125 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~  125 (355)
                      ||+|.++| .|-+|+.+++.|+++||+|++.+|++++...+....         ..-.++..++++++|+|+-+..
T Consensus         1 m~~Ig~IG-lG~mG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~g---------~~~~~s~~e~~~~~dvvi~~v~   66 (163)
T PF03446_consen    1 MMKIGFIG-LGNMGSAMARNLAKAGYEVTVYDRSPEKAEALAEAG---------AEVADSPAEAAEQADVVILCVP   66 (163)
T ss_dssp             -BEEEEE---SHHHHHHHHHHHHTTTEEEEEESSHHHHHHHHHTT---------EEEESSHHHHHHHBSEEEE-SS
T ss_pred             CCEEEEEc-hHHHHHHHHHHHHhcCCeEEeeccchhhhhhhHHhh---------hhhhhhhhhHhhcccceEeecc
Confidence            47899999 799999999999999999999999987766554321         2234566677777899998854

1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....

>PRK11064 wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Provisional

Probab=97.37  E-value=0.0013  Score=60.78  Aligned_cols=41  Identities=24%  Similarity=0.298  Sum_probs=36.6

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccC
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIF   91 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~   91 (355)
                      +|+|.|+| .|++|..++..|.+.||+|+++++++.+...+.
T Consensus         3 ~~kI~VIG-lG~~G~~~A~~La~~G~~V~~~D~~~~~v~~l~   43 (415)
T PRK11064          3 FETISVIG-LGYIGLPTAAAFASRQKQVIGVDINQHAVDTIN   43 (415)
T ss_pred             ccEEEEEC-cchhhHHHHHHHHhCCCEEEEEeCCHHHHHHHH
Confidence            47999999 899999999999999999999999988766543

>PRK08655 prephenate dehydrogenase; Provisional

Probab=97.37  E-value=0.00086  Score=62.42  Aligned_cols=67  Identities=22%  Similarity=0.278  Sum_probs=48.8

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcCCCcEEEECCC
Q 018503           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG  125 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~  125 (355)
                      |+|+|+||+|.+|..+++.|.+.|++|++++|+++.........      ++..  .....+.+.++|+||.+..
T Consensus         1 MkI~IIGG~G~mG~slA~~L~~~G~~V~v~~r~~~~~~~~a~~~------gv~~--~~~~~e~~~~aDvVIlavp   67 (437)
T PRK08655          1 MKISIIGGTGGLGKWFARFLKEKGFEVIVTGRDPKKGKEVAKEL------GVEY--ANDNIDAAKDADIVIISVP   67 (437)
T ss_pred             CEEEEEecCCHHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHc------CCee--ccCHHHHhccCCEEEEecC
Confidence            68999999999999999999999999999999876532221110      1211  2234556778899998864

>PRK08040 putative semialdehyde dehydrogenase; Provisional

Probab=97.35  E-value=0.00079  Score=59.96  Aligned_cols=71  Identities=20%  Similarity=0.256  Sum_probs=45.2

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHhCC---CeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcCCCcEEEECC
Q 018503           48 ASQMTVSVTGATGFIGRRLVQRLQADN---HQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLA  124 (355)
Q Consensus        48 ~~~~~IlVtGatG~iG~~l~~~L~~~g---~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a  124 (355)
                      +.+++|.|+||||++|+.+++.|.++.   .++..+....+........     ...+.+.+.+.  ..+.++|+||.++
T Consensus         2 ~~~~~vaIvGATG~vG~ellrlL~~~~hP~~~l~~laS~~saG~~~~~~-----~~~~~v~~~~~--~~~~~~Dvvf~a~   74 (336)
T PRK08040          2 SEGWNIALLGATGAVGEALLELLAERQFPVGELYALASEESAGETLRFG-----GKSVTVQDAAE--FDWSQAQLAFFVA   74 (336)
T ss_pred             CCCCEEEEEccCCHHHHHHHHHHhcCCCCceEEEEEEccCcCCceEEEC-----CcceEEEeCch--hhccCCCEEEECC
Confidence            356799999999999999999999854   3677665554433332211     11233333222  1236789999887


Q ss_pred             C
Q 018503          125 G  125 (355)
Q Consensus       125 ~  125 (355)
                      +
T Consensus        75 p   75 (336)
T PRK08040         75 G   75 (336)
T ss_pred             C
Confidence            5

>TIGR01296 asd_B aspartate-semialdehyde dehydrogenase (peptidoglycan organisms)

Probab=97.35  E-value=0.00037  Score=62.52  Aligned_cols=68  Identities=22%  Similarity=0.343  Sum_probs=43.7

Q ss_pred             EEEEEcCCchHHHHHHHHHHhCCCeEE---EEecCCchhhccCCCCCCccCCCeeecCCcchhhhcCCCcEEEECCCC
Q 018503           52 TVSVTGATGFIGRRLVQRLQADNHQVR---VLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT  126 (355)
Q Consensus        52 ~IlVtGatG~iG~~l~~~L~~~g~~V~---~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~  126 (355)
                      +|+|+||||++|+.|++.|.+++|.+.   .+.+..+....+...     ...+.+.+.+  ...++++|+||.+++.
T Consensus         1 ~VaIvGAtG~vG~eLi~lL~~~~hp~~~l~~~as~~~~g~~~~~~-----~~~~~~~~~~--~~~~~~~D~v~~a~g~   71 (339)
T TIGR01296         1 NVAIVGATGAVGQEMLKILEERNFPIDKLVLLASDRSAGRKVTFK-----GKELEVNEAK--IESFEGIDIALFSAGG   71 (339)
T ss_pred             CEEEEcCCCHHHHHHHHHHHhCCCChhhEEEEeccccCCCeeeeC-----CeeEEEEeCC--hHHhcCCCEEEECCCH
Confidence            589999999999999999999887644   444654443333211     1112222222  2334789999999873

Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. This model represents a branch more closely related to the USG-1 protein than to the other aspartate-semialdehyde dehydrogenases represented in model TIGR00978.

>TIGR01763 MalateDH_bact malate dehydrogenase, NAD-dependent

Probab=97.34  E-value=0.0037  Score=55.33  Aligned_cols=102  Identities=20%  Similarity=0.222  Sum_probs=67.9

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhCCC-eEEEEecCCchhhcc----CCCCCCccCCCeeecCCcchhhhcCCCcEEEECCC
Q 018503           51 MTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRSKAELI----FPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG  125 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~----~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~  125 (355)
                      |||.|+|+ |++|..++..|+..|+ +|+.++.........    ...... ......+.-..++.+ ++++|+||-++|
T Consensus         2 ~KV~VIGa-G~vG~~iA~~la~~g~~~VvlvDi~~~l~~g~a~d~~~~~~~-~~~~~~i~~t~d~~~-~~~aDiVIitag   78 (305)
T TIGR01763         2 KKISVIGA-GFVGATTAFRLAEKELADLVLLDVVEGIPQGKALDMYEASPV-GGFDTKVTGTNNYAD-TANSDIVVITAG   78 (305)
T ss_pred             CEEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCCChhHHHHHhhhhhhhc-cCCCcEEEecCCHHH-hCCCCEEEEcCC
Confidence            68999995 9999999999999886 899999865532211    110000 001122322234544 689999999999


Q ss_pred             CCCCCCCChhhHHHHHHHhhhhHHHHHHHHHcC
Q 018503          126 TPIGTRWSSEIKKEIKESRIRVTSKVVDLINES  158 (355)
Q Consensus       126 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~  158 (355)
                      .+...   .....+.+..|....+.+++.+.+.
T Consensus        79 ~p~~~---~~sR~~l~~~N~~iv~~i~~~I~~~  108 (305)
T TIGR01763        79 LPRKP---GMSREDLLSMNAGIVREVTGRIMEH  108 (305)
T ss_pred             CCCCc---CCCHHHHHHHHHHHHHHHHHHHHHH
Confidence            64221   2234567788999999999888773

The annotation of Botryococcus braunii as lactate dehydrogenase appears top be in error. This was initially annotated as MDH by Swiss-Prot and then changed. The rationale for either of these annotations is not traceable.

>PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase

Probab=97.33  E-value=0.00099  Score=67.55  Aligned_cols=76  Identities=14%  Similarity=0.117  Sum_probs=56.6

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhC-CCe-------------EEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcC
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQAD-NHQ-------------VRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ  115 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~-g~~-------------V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~  115 (355)
                      +++|+|+| +|++|+.+++.|.+. +++             |.+.+++......+...........+|+.|.+++.++++
T Consensus       569 ~~rIlVLG-AG~VG~~~a~~La~~~~~~~~~~~~~~~~~~lV~VaD~~~~~a~~la~~~~~~~~v~lDv~D~e~L~~~v~  647 (1042)
T PLN02819        569 SQNVLILG-AGRVCRPAAEYLASVKTISYYGDDSEEPTDVHVIVASLYLKDAKETVEGIENAEAVQLDVSDSESLLKYVS  647 (1042)
T ss_pred             CCcEEEEC-CCHHHHHHHHHHHhCcCccccccccccccccEEEEECCCHHHHHHHHHhcCCCceEEeecCCHHHHHHhhc
Confidence            56899999 599999999999875 344             888888876655443321000134578889999999889


Q ss_pred             CCcEEEECCCC
Q 018503          116 GSTAVVNLAGT  126 (355)
Q Consensus       116 ~~d~vi~~a~~  126 (355)
                      ++|+||.+...
T Consensus       648 ~~DaVIsalP~  658 (1042)
T PLN02819        648 QVDVVISLLPA  658 (1042)
T ss_pred             CCCEEEECCCc
Confidence            99999999864

>PLN02602 lactate dehydrogenase

Probab=97.30  E-value=0.0034  Score=56.41  Aligned_cols=113  Identities=17%  Similarity=0.249  Sum_probs=73.2

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhCC--CeEEEEecCCchhhccCCCCC--CccCCCeeecCCcchhhhcCCCcEEEECCCC
Q 018503           51 MTVSVTGATGFIGRRLVQRLQADN--HQVRVLTRSRSKAELIFPGKK--TRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT  126 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~--~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~  126 (355)
                      +||.|+|+ |.+|++++..|+..+  .++..++.+.+..........  ........+....+.. .++++|+||.+||.
T Consensus        38 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~LiDi~~~~~~g~a~DL~~~~~~~~~~~i~~~~dy~-~~~daDiVVitAG~  115 (350)
T PLN02602         38 TKVSVVGV-GNVGMAIAQTILTQDLADELALVDVNPDKLRGEMLDLQHAAAFLPRTKILASTDYA-VTAGSDLCIVTAGA  115 (350)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCCchhhHHHHHHHhhhhcCCCCEEEeCCCHH-HhCCCCEEEECCCC
Confidence            69999995 999999999999887  489999987754322111000  0001113443322343 37899999999997


Q ss_pred             CCCCCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEe
Q 018503          127 PIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVS  169 (355)
Q Consensus       127 ~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~S  169 (355)
                      +..   ...+-.+.+..|+...+.+.+.+.+.. ....++.+|
T Consensus       116 ~~k---~g~tR~dll~~N~~I~~~i~~~I~~~~-p~~ivivvt  154 (350)
T PLN02602        116 RQI---PGESRLNLLQRNVALFRKIIPELAKYS-PDTILLIVS  154 (350)
T ss_pred             CCC---cCCCHHHHHHHHHHHHHHHHHHHHHHC-CCeEEEEec
Confidence            522   223346788899999999999988842 223444444

>PF03721 UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; InterPro: IPR001732 The UDP-glucose/GDP-mannose dehydrogenases are a small group of enzymes which possesses the ability to catalyse the NAD-dependent 2-fold oxidation of an alcohol to an acid without the release of an aldehyde intermediate [, ]

Probab=97.26  E-value=0.00029  Score=57.42  Aligned_cols=76  Identities=25%  Similarity=0.386  Sum_probs=44.6

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCC-----------eeecCCcchhhhcCCCcE
Q 018503           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPG-----------VMIAEEPQWRDCIQGSTA  119 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~-----------~d~~~~~~~~~~~~~~d~  119 (355)
                      |||.|+| .||+|-.++..|.+.||+|++++.+++....+........-+.           ..+.-..++..+++++|+
T Consensus         1 M~I~ViG-lGyvGl~~A~~lA~~G~~V~g~D~~~~~v~~l~~g~~p~~E~~l~~ll~~~~~~~~l~~t~~~~~ai~~adv   79 (185)
T PF03721_consen    1 MKIAVIG-LGYVGLPLAAALAEKGHQVIGVDIDEEKVEALNNGELPIYEPGLDELLKENVSAGRLRATTDIEEAIKDADV   79 (185)
T ss_dssp             -EEEEE---STTHHHHHHHHHHTTSEEEEE-S-HHHHHHHHTTSSSS-CTTHHHHHHHHHHTTSEEEESEHHHHHHH-SE
T ss_pred             CEEEEEC-CCcchHHHHHHHHhCCCEEEEEeCChHHHHHHhhccccccccchhhhhccccccccchhhhhhhhhhhccce
Confidence            7999998 8999999999999999999999999886655443211000000           112223345555667899


Q ss_pred             EEECCCCC
Q 018503          120 VVNLAGTP  127 (355)
Q Consensus       120 vi~~a~~~  127 (355)
                      +|-|.+-+
T Consensus        80 ~~I~VpTP   87 (185)
T PF03721_consen   80 VFICVPTP   87 (185)
T ss_dssp             EEE----E
T ss_pred             EEEecCCC
Confidence            99998643

The enzymes have a wide range of functions. In plants UDP-glucose dehydrogenase, 1.1.1.22 from EC, is an important enzyme in the synthesis of hemicellulose and pectin [], which are the components of newly formed cell walls; while in zebrafish UDP-glucose dehydrogenase is required for cardiac valve formation []. In Xanthomonas campestris, a plant pathogen, UDP-glucose dehydrogenase is required for virulence []. GDP-mannose dehydrogenase, 1.1.1.132 from EC, catalyses the formation of GDP-mannuronic acid, which is the monomeric unit from which the exopolysaccharide alginate is formed. Alginate is secreted by a number of bacteria, which include Pseudomonas aeruginosa and Azotobacter vinelandii. In P. aeruginosa, alginate is believed to play an important role in the bacteria's resistance to antibiotics and the host immune response [], while in A. vinelandii it is essential for the encystment process []. This entry represents the N-terminal NAD(+)-binding domain. Structural studies indicate that this domain forms an alpha-beta structure containing the six-stranded parallel beta sheet characteristic of the dinucleotide binding Rossman fold [, ].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0055114 oxidation-reduction process; PDB: 3OJO_A 3OJL_A 1MV8_B 1MUU_A 1MFZ_C 3GG2_D 1DLJ_A 1DLI_A 3G79_B 2Y0E_D ....

>TIGR03026 NDP-sugDHase nucleotide sugar dehydrogenase

Probab=97.24  E-value=0.0023  Score=59.28  Aligned_cols=75  Identities=23%  Similarity=0.398  Sum_probs=51.9

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCC-----------eeecCCcchhhhcCCCcE
Q 018503           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPG-----------VMIAEEPQWRDCIQGSTA  119 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~-----------~d~~~~~~~~~~~~~~d~  119 (355)
                      |+|.|+| .|++|..++..|.+.||+|+++++++++...+.........+.           ..+.-..+..++++++|+
T Consensus         1 mkI~vIG-lG~~G~~lA~~La~~G~~V~~~d~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~g~l~~~~~~~~~~~~adv   79 (411)
T TIGR03026         1 MKIAVIG-LGYVGLPLAALLADLGHEVTGVDIDQEKVDKLNKGKSPIYEPGLDELLAKALAAGRLRATTDYEDAIRDADV   79 (411)
T ss_pred             CEEEEEC-CCchhHHHHHHHHhcCCeEEEEECCHHHHHHhhcCCCCCCCCCHHHHHHHhhhcCCeEEECCHHHHHhhCCE
Confidence            5899998 8999999999999999999999998877655443210000000           002222345566788999


Q ss_pred             EEECCCC
Q 018503          120 VVNLAGT  126 (355)
Q Consensus       120 vi~~a~~  126 (355)
                      ||-+...
T Consensus        80 vii~vpt   86 (411)
T TIGR03026        80 IIICVPT   86 (411)
T ss_pred             EEEEeCC
Confidence            9988764

All of these enzymes contain three Pfam domains, pfam03721, pfam00984, and pfam03720 for the N-terminal, central, and C-terminal regions respectively.

>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=97.23  E-value=0.0012  Score=62.19  Aligned_cols=75  Identities=19%  Similarity=0.146  Sum_probs=48.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCch-hhccCCCCCCccCCCeeecCCcchhhhcCCCcEEEECCCCC
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSK-AELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTP  127 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~-~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~~  127 (355)
                      +.++|+|+|+++ +|..+++.|++.|++|++.+++... .........   ..++++...+...+...++|+||+++|..
T Consensus         4 ~~k~v~iiG~g~-~G~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~~l~---~~~~~~~~~~~~~~~~~~~d~vv~~~g~~   79 (450)
T PRK14106          4 KGKKVLVVGAGV-SGLALAKFLKKLGAKVILTDEKEEDQLKEALEELG---ELGIELVLGEYPEEFLEGVDLVVVSPGVP   79 (450)
T ss_pred             CCCEEEEECCCH-HHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHH---hcCCEEEeCCcchhHhhcCCEEEECCCCC
Confidence            357999999777 9999999999999999999997522 111000000   01123332222234556799999999863

>COG1004 Ugd Predicted UDP-glucose 6-dehydrogenase [Cell envelope biogenesis, outer membrane]

Probab=97.22  E-value=0.0029  Score=56.43  Aligned_cols=76  Identities=26%  Similarity=0.439  Sum_probs=55.6

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCe-----------eecCCcchhhhcCCCcE
Q 018503           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGV-----------MIAEEPQWRDCIQGSTA  119 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~-----------d~~~~~~~~~~~~~~d~  119 (355)
                      |||.|+| +||+|--..-.|.+.||+|++++.++++...+......-.-+++           .+.-..+..+++++.|+
T Consensus         1 MkI~viG-tGYVGLv~g~~lA~~GHeVv~vDid~~KV~~ln~g~~PI~EpgLe~ll~~~~~~gRl~fTtd~~~a~~~adv   79 (414)
T COG1004           1 MKITVIG-TGYVGLVTGACLAELGHEVVCVDIDESKVELLNKGISPIYEPGLEELLKENLASGRLRFTTDYEEAVKDADV   79 (414)
T ss_pred             CceEEEC-CchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHhCCCCCCcCccHHHHHHhccccCcEEEEcCHHHHHhcCCE
Confidence            7899999 99999999999999999999999998887655443210000111           12233466777889999


Q ss_pred             EEECCCCC
Q 018503          120 VVNLAGTP  127 (355)
Q Consensus       120 vi~~a~~~  127 (355)
                      +|-+.|-+
T Consensus        80 ~fIavgTP   87 (414)
T COG1004          80 VFIAVGTP   87 (414)
T ss_pred             EEEEcCCC
Confidence            99998754

>cd05295 MDH_like Malate dehydrogenase-like

Probab=97.21  E-value=0.0012  Score=60.73  Aligned_cols=170  Identities=18%  Similarity=0.192  Sum_probs=93.4

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhC---C----CeEEEEecC--CchhhccCC---CCCCccCCCeeecCCcchhhhcCCC
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQAD---N----HQVRVLTRS--RSKAELIFP---GKKTRFFPGVMIAEEPQWRDCIQGS  117 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~---g----~~V~~~~r~--~~~~~~~~~---~~~~~~~~~~d~~~~~~~~~~~~~~  117 (355)
                      +-+|+||||+|+||.+|+-.+.+-   |    ..++.++..  .+......-   .........+.+..  .-.+.++++
T Consensus       123 p~~V~vtgAag~i~Y~l~~~ia~G~~fG~~~~v~L~LlDi~~~~~~l~G~amDL~D~a~pll~~v~i~~--~~~ea~~da  200 (452)
T cd05295         123 PLQVCITNASAPLCYHLIPSLASGEVFGMEEEISIHLLDSPENLEKLKGLVMEVEDLAFPLLRGISVTT--DLDVAFKDA  200 (452)
T ss_pred             ceEEEEecCcHHHHHHHHHHHhCCcccCCCCeEEEEEEcCCCchhhHHHHHHHHHHhHHhhcCCcEEEE--CCHHHhCCC
Confidence            358999999999999999999872   3    245556663  222111000   00000011234432  234778899


Q ss_pred             cEEEECCCCCCCCCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCCCCcc---ccCCCCCCChh
Q 018503          118 TAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEV---FDESSPSGNDY  194 (355)
Q Consensus       118 d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~~~~---~~e~~~~~~~y  194 (355)
                      |+||.+||.+..   ....-.+.++.|....+.+..++.+.+....+++.+.|--+.    .....   ....-|+....
T Consensus       201 DvvIitag~prk---~G~~R~DLL~~N~~Ifk~~g~~I~~~a~~~~~VlVv~tNPvD----~~t~i~~k~apgiP~~rVi  273 (452)
T cd05295         201 HVIVLLDDFLIK---EGEDLEGCIRSRVAICQLYGPLIEKNAKEDVKVIVAGRTFLN----LKTSILIKYAPSIPRKNII  273 (452)
T ss_pred             CEEEECCCCCCC---cCCCHHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEeCCcHH----HHHHHHHHHcCCCCHHHEE
Confidence            999999997532   233456888999999999999998842222456555542110    00000   00011111111


Q ss_pred             -HHHHHHHHHHHHhccCCCCeEEEEEecEEEeCCC
Q 018503          195 -LAEVCREWEGTALKVNKDVRLALIRIGIVLGKDG  228 (355)
Q Consensus       195 -~~k~~~~~~~~~~~~~~~~~~~i~Rp~~i~G~~~  228 (355)
                       .............+...+++...|+-..|+|...
T Consensus       274 g~gtlds~R~r~~LA~kl~V~~~~V~~~~VwGeHG  308 (452)
T cd05295         274 AVARLQENRAKALLARKLNVNSAGIKDVIVWGNIG  308 (452)
T ss_pred             EecchHHHHHHHHHHHHhCcCHHHceeeEEEEccC
Confidence             1112233333334444577777787778888764

These MDH-like proteins are related to other groups in the MDH family but do not have conserved substrate and cofactor binding residues. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subgroup are uncharacterized MDH-like proteins from animals. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>COG0289 DapB Dihydrodipicolinate reductase [Amino acid transport and metabolism]

Probab=97.17  E-value=0.0045  Score=52.22  Aligned_cols=36  Identities=28%  Similarity=0.488  Sum_probs=29.3

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCC-CeEEE-EecCCc
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADN-HQVRV-LTRSRS   85 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g-~~V~~-~~r~~~   85 (355)
                      +|||.|.|++|..|+.+++.+.+.+ .++.+ ++|.++
T Consensus         2 ~iki~V~Ga~GRMG~~ii~~v~~~~~~~L~aa~~~~~~   39 (266)
T COG0289           2 MIKVAVAGASGRMGRTLIRAVLEAPDLELVAAFDRPGS   39 (266)
T ss_pred             CceEEEEcCCChHHHHHHHHHhcCCCceEEEEEecCCc
Confidence            5899999999999999999999874 66555 555544

>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated

Probab=97.15  E-value=0.0042  Score=55.71  Aligned_cols=34  Identities=21%  Similarity=0.335  Sum_probs=30.3

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCC-eEEEEecCC
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSR   84 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~   84 (355)
                      ..+|+|+| .|.+|+++++.|...|. +|+.++++.
T Consensus        24 ~~~VlVvG-~GglGs~va~~La~aGvg~i~lvD~D~   58 (339)
T PRK07688         24 EKHVLIIG-AGALGTANAEMLVRAGVGKVTIVDRDY   58 (339)
T ss_pred             CCcEEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCCc
Confidence            46899999 59999999999999997 899999864

>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit

Probab=97.15  E-value=0.001  Score=58.17  Aligned_cols=69  Identities=20%  Similarity=0.153  Sum_probs=51.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcCCCcEEEECCC
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG  125 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~  125 (355)
                      ..++++|+| .|.+|+.+++.|...|.+|++.+|+.+........       .....+.+.+.+.++++|+||++..
T Consensus       150 ~gk~v~IiG-~G~iG~avA~~L~~~G~~V~v~~R~~~~~~~~~~~-------g~~~~~~~~l~~~l~~aDiVint~P  218 (287)
T TIGR02853       150 HGSNVMVLG-FGRTGMTIARTFSALGARVFVGARSSADLARITEM-------GLIPFPLNKLEEKVAEIDIVINTIP  218 (287)
T ss_pred             CCCEEEEEc-ChHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHC-------CCeeecHHHHHHHhccCCEEEECCC
Confidence            357999999 59999999999999999999999987654332211       1222334566778889999999863

This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.

>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase

Probab=97.15  E-value=0.00073  Score=53.43  Aligned_cols=73  Identities=14%  Similarity=0.120  Sum_probs=50.3

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCC-CeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcCCCcEEEECCCCC
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADN-HQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTP  127 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~~  127 (355)
                      .++|+|+|+ |.+|+.+++.|.+.| ++|++++|+.++........... ....+.   .+..+.++++|+||.+....
T Consensus        19 ~~~i~iiG~-G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~-~~~~~~---~~~~~~~~~~Dvvi~~~~~~   92 (155)
T cd01065          19 GKKVLILGA-GGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGEL-GIAIAY---LDLEELLAEADLIINTTPVG   92 (155)
T ss_pred             CCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhc-ccceee---cchhhccccCCEEEeCcCCC
Confidence            478999996 999999999999985 89999999877654432211000 001122   23444578899999998653

Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=97.13  E-value=0.00057  Score=64.35  Aligned_cols=73  Identities=15%  Similarity=0.226  Sum_probs=54.4

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhh-cCCCcEEEECCC
Q 018503           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDC-IQGSTAVVNLAG  125 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~-~~~~d~vi~~a~  125 (355)
                      |+|+|+|+ |.+|+++++.|.+.|++|++++++++........... .....|..+.+.+.++ +.++|+||-+..
T Consensus         1 m~viIiG~-G~ig~~~a~~L~~~g~~v~vid~~~~~~~~~~~~~~~-~~~~gd~~~~~~l~~~~~~~a~~vi~~~~   74 (453)
T PRK09496          1 MKIIIVGA-GQVGYTLAENLSGENNDVTVIDTDEERLRRLQDRLDV-RTVVGNGSSPDVLREAGAEDADLLIAVTD   74 (453)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHhhcCE-EEEEeCCCCHHHHHHcCCCcCCEEEEecC
Confidence            68999996 9999999999999999999999988765544321100 0223466677777776 678999988754

>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

Probab=97.12  E-value=0.0011  Score=54.77  Aligned_cols=69  Identities=17%  Similarity=0.188  Sum_probs=48.0

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcCCCcEEEECCC
Q 018503           48 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG  125 (355)
Q Consensus        48 ~~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~  125 (355)
                      ...|+|+|+|. |.+|+++++.|.+.|++|++.+++..........     + .....+.+++..  .++|+++.+|.
T Consensus        26 l~gk~v~I~G~-G~vG~~~A~~L~~~G~~Vvv~D~~~~~~~~~~~~-----~-g~~~v~~~~l~~--~~~Dv~vp~A~   94 (200)
T cd01075          26 LEGKTVAVQGL-GKVGYKLAEHLLEEGAKLIVADINEEAVARAAEL-----F-GATVVAPEEIYS--VDADVFAPCAL   94 (200)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHH-----c-CCEEEcchhhcc--ccCCEEEeccc
Confidence            35589999994 8999999999999999999999887654433221     1 122333332221  27999998875

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc

>TIGR01915 npdG NADPH-dependent F420 reductase

Probab=97.11  E-value=0.00072  Score=56.89  Aligned_cols=74  Identities=20%  Similarity=0.221  Sum_probs=49.0

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCc-cCCCe--eecCCcchhhhcCCCcEEEECCC
Q 018503           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTR-FFPGV--MIAEEPQWRDCIQGSTAVVNLAG  125 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~--d~~~~~~~~~~~~~~d~vi~~a~  125 (355)
                      |||.|+||+|.+|+.++..|.+.||+|.+.+|+++....+....... ....+  .+.. ....++++++|+||.+..
T Consensus         1 MkI~IIGG~G~mG~ala~~L~~~G~~V~v~~r~~~~~~~l~~~~~~~~~~~g~~~~~~~-~~~~ea~~~aDvVilavp   77 (219)
T TIGR01915         1 MKIAVLGGTGDQGKGLALRLAKAGNKIIIGSRDLEKAEEAAAKALEELGHGGSDIKVTG-ADNAEAAKRADVVILAVP   77 (219)
T ss_pred             CEEEEEcCCCHHHHHHHHHHHhCCCEEEEEEcCHHHHHHHHHHHHhhccccCCCceEEE-eChHHHHhcCCEEEEECC
Confidence            68999999999999999999999999999999876654322110000 00011  1111 123456678999998864

This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.

>PRK13940 glutamyl-tRNA reductase; Provisional

Probab=97.10  E-value=0.00097  Score=61.35  Aligned_cols=72  Identities=18%  Similarity=0.224  Sum_probs=55.6

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCC-CeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcCCCcEEEECCCCC
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADN-HQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTP  127 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~~  127 (355)
                      .++|+|+| +|-+|+.+++.|.+.| .+|+++.|+.++...+...     +........+++.+.+.++|+||++.+.+
T Consensus       181 ~kkvlviG-aG~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~-----~~~~~~~~~~~l~~~l~~aDiVI~aT~a~  253 (414)
T PRK13940        181 SKNVLIIG-AGQTGELLFRHVTALAPKQIMLANRTIEKAQKITSA-----FRNASAHYLSELPQLIKKADIIIAAVNVL  253 (414)
T ss_pred             CCEEEEEc-CcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHH-----hcCCeEecHHHHHHHhccCCEEEECcCCC
Confidence            47899999 5999999999999999 4799999998776655443     21123344466777888999999998864

>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed

Probab=97.10  E-value=0.00096  Score=58.32  Aligned_cols=74  Identities=12%  Similarity=0.166  Sum_probs=51.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCC-CeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcCCCcEEEECCCCC
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADN-HQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTP  127 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~~  127 (355)
                      ..++++|+|+ |.+|++++..|.+.| .+|++++|+.++...+......  ...+.+ +. ...+.+.++|+||++....
T Consensus       122 ~~k~vlVlGa-Gg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~~--~~~~~~-~~-~~~~~~~~~DivInaTp~g  196 (278)
T PRK00258        122 KGKRILILGA-GGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFGA--LGKAEL-DL-ELQEELADFDLIINATSAG  196 (278)
T ss_pred             CCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhh--ccceee-cc-cchhccccCCEEEECCcCC
Confidence            3468999995 999999999999999 7999999998776554332110  111223 11 2345567899999998653

>PRK08306 dipicolinate synthase subunit A; Reviewed

Probab=97.10  E-value=0.0014  Score=57.73  Aligned_cols=69  Identities=20%  Similarity=0.138  Sum_probs=52.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcCCCcEEEECCC
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG  125 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~  125 (355)
                      ..++++|+| .|.+|+.++..|...|.+|++++|++.........       .++..+.+.+.+.++++|+||+++.
T Consensus       151 ~g~kvlViG-~G~iG~~~a~~L~~~Ga~V~v~~r~~~~~~~~~~~-------G~~~~~~~~l~~~l~~aDiVI~t~p  219 (296)
T PRK08306        151 HGSNVLVLG-FGRTGMTLARTLKALGANVTVGARKSAHLARITEM-------GLSPFHLSELAEEVGKIDIIFNTIP  219 (296)
T ss_pred             CCCEEEEEC-CcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHc-------CCeeecHHHHHHHhCCCCEEEECCC
Confidence            357999999 58999999999999999999999997653322211       1233344567778889999999863

>PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=97.09  E-value=0.0039  Score=55.31  Aligned_cols=75  Identities=15%  Similarity=0.110  Sum_probs=50.2

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCC-----------CCCCccCCCeeecCCcchhhhcCCCc
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP-----------GKKTRFFPGVMIAEEPQWRDCIQGST  118 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-----------~~~~~~~~~~d~~~~~~~~~~~~~~d  118 (355)
                      .++|.|+| +|.+|+.++..|+..|++|++.+++++.......           .........-.+.-..++.++++++|
T Consensus         7 i~~VaVIG-aG~MG~giA~~~a~aG~~V~l~D~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~l~~av~~aD   85 (321)
T PRK07066          7 IKTFAAIG-SGVIGSGWVARALAHGLDVVAWDPAPGAEAALRANVANAWPALERQGLAPGASPARLRFVATIEACVADAD   85 (321)
T ss_pred             CCEEEEEC-cCHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCChhhHHhhceecCCHHHHhcCCC
Confidence            36899999 6999999999999999999999998764322110           00000000001122335777889999


Q ss_pred             EEEECCC
Q 018503          119 AVVNLAG  125 (355)
Q Consensus       119 ~vi~~a~  125 (355)
                      .||-+..
T Consensus        86 lViEavp   92 (321)
T PRK07066         86 FIQESAP   92 (321)
T ss_pred             EEEECCc
Confidence            9999864

>cd05290 LDH_3 A subgroup of L-lactate dehydrogenases

Probab=97.07  E-value=0.0061  Score=53.87  Aligned_cols=102  Identities=15%  Similarity=0.185  Sum_probs=68.0

Q ss_pred             EEEEEcCCchHHHHHHHHHHhCCC--eEEEEecCCchhhccCCCCCC--ccC--CCeeecCCcchhhhcCCCcEEEECCC
Q 018503           52 TVSVTGATGFIGRRLVQRLQADNH--QVRVLTRSRSKAELIFPGKKT--RFF--PGVMIAEEPQWRDCIQGSTAVVNLAG  125 (355)
Q Consensus        52 ~IlVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~--~~~--~~~d~~~~~~~~~~~~~~d~vi~~a~  125 (355)
                      ||.|+|+ |.+|+.++..|+.++.  ++..++...+...........  ...  ..+.+.. .+ .+.++++|+||.+||
T Consensus         1 Ki~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~a~g~a~DL~~~~~~~~~~~~~i~~-~~-y~~~~~aDivvitaG   77 (307)
T cd05290           1 KLVVIGA-GHVGSAVLNYALALGLFSEIVLIDVNEGVAEGEALDFHHATALTYSTNTKIRA-GD-YDDCADADIIVITAG   77 (307)
T ss_pred             CEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHHHHHHHhhhccCCCCCEEEEE-CC-HHHhCCCCEEEECCC
Confidence            5899997 9999999999998874  799999876543221110000  000  1233332 22 356789999999999


Q ss_pred             CCCCCCCChhh-HHHHHHHhhhhHHHHHHHHHcC
Q 018503          126 TPIGTRWSSEI-KKEIKESRIRVTSKVVDLINES  158 (355)
Q Consensus       126 ~~~~~~~~~~~-~~~~~~~n~~~~~~l~~a~~~~  158 (355)
                      .+..+  .... -.+.+..|....+.+.+.+.++
T Consensus        78 ~~~kp--g~tr~R~dll~~N~~I~~~i~~~i~~~  109 (307)
T cd05290          78 PSIDP--GNTDDRLDLAQTNAKIIREIMGNITKV  109 (307)
T ss_pred             CCCCC--CCCchHHHHHHHHHHHHHHHHHHHHHh
Confidence            74221  1111 3678889999999999999884

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of some bacterial LDHs from firmicutes, gammaproteobacteria, and actinobacteria. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenase, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]

Probab=97.07  E-value=0.0014  Score=58.95  Aligned_cols=77  Identities=21%  Similarity=0.127  Sum_probs=53.1

Q ss_pred             cCCCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcC----CCcEEEE
Q 018503           47 KASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ----GSTAVVN  122 (355)
Q Consensus        47 ~~~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~----~~d~vi~  122 (355)
                      ...+++|||.||+|.+|+..++.+...|...++.+++.++.+.....+.   -.-+|+.+++..+...+    ++|+|+.
T Consensus       155 ~~~g~~vLv~ggsggVG~~aiQlAk~~~~~~v~t~~s~e~~~l~k~lGA---d~vvdy~~~~~~e~~kk~~~~~~DvVlD  231 (347)
T KOG1198|consen  155 LSKGKSVLVLGGSGGVGTAAIQLAKHAGAIKVVTACSKEKLELVKKLGA---DEVVDYKDENVVELIKKYTGKGVDVVLD  231 (347)
T ss_pred             cCCCCeEEEEeCCcHHHHHHHHHHHhcCCcEEEEEcccchHHHHHHcCC---cEeecCCCHHHHHHHHhhcCCCccEEEE
Confidence            3456799999999999999999999989545555555555444433322   23356666554444433    6999999


Q ss_pred             CCCC
Q 018503          123 LAGT  126 (355)
Q Consensus       123 ~a~~  126 (355)
                      |+|.
T Consensus       232 ~vg~  235 (347)
T KOG1198|consen  232 CVGG  235 (347)
T ss_pred             CCCC
Confidence            9985

>PRK11199 tyrA bifunctional chorismate mutase/prephenate dehydrogenase; Provisional

Probab=97.07  E-value=0.0015  Score=59.57  Aligned_cols=55  Identities=22%  Similarity=0.301  Sum_probs=44.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcCCCcEEEECCC
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG  125 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~  125 (355)
                      ..++|.|+||.|.+|..++..|.+.||+|++++|+..                      +...++++++|+||.|..
T Consensus        97 ~~~~I~IiGG~GlmG~slA~~l~~~G~~V~~~d~~~~----------------------~~~~~~~~~aDlVilavP  151 (374)
T PRK11199         97 DLRPVVIVGGKGQLGRLFAKMLTLSGYQVRILEQDDW----------------------DRAEDILADAGMVIVSVP  151 (374)
T ss_pred             ccceEEEEcCCChhhHHHHHHHHHCCCeEEEeCCCcc----------------------hhHHHHHhcCCEEEEeCc
Confidence            4579999999999999999999999999999998531                      123345667888887764

>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP

Probab=97.02  E-value=0.0075  Score=46.44  Aligned_cols=100  Identities=12%  Similarity=0.229  Sum_probs=59.8

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhCCC-eEEEEecCCchhhccCCCCC----C--------------ccCCCeeec------
Q 018503           51 MTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRSKAELIFPGKK----T--------------RFFPGVMIA------  105 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~----~--------------~~~~~~d~~------  105 (355)
                      +||+|.| .|-+|+.+++.|...|. +++.++...-....+.....    .              ...+.+++.      
T Consensus         3 ~~v~iiG-~G~vGs~va~~L~~~Gv~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~np~~~v~~~~~~~   81 (135)
T PF00899_consen    3 KRVLIIG-AGGVGSEVAKNLARSGVGKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEINPDVEVEAIPEKI   81 (135)
T ss_dssp             -EEEEES-TSHHHHHHHHHHHHHTTSEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHSTTSEEEEEESHC
T ss_pred             CEEEEEC-cCHHHHHHHHHHHHhCCCceeecCCcceeecccccccccccccchhHHHHHHHHHHHHhcCceeeeeeeccc
Confidence            5899999 79999999999999996 78888886543332222100    0              001111111      


Q ss_pred             CCcchhhhcCCCcEEEECCCCCCCCCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeee
Q 018503          106 EEPQWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATA  172 (355)
Q Consensus       106 ~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~  172 (355)
                      +.+...++++++|+||.+...                  ...-..+.++|.+  .+. ++|+.++.+
T Consensus        82 ~~~~~~~~~~~~d~vi~~~d~------------------~~~~~~l~~~~~~--~~~-p~i~~~~~g  127 (135)
T PF00899_consen   82 DEENIEELLKDYDIVIDCVDS------------------LAARLLLNEICRE--YGI-PFIDAGVNG  127 (135)
T ss_dssp             SHHHHHHHHHTSSEEEEESSS------------------HHHHHHHHHHHHH--TT--EEEEEEEET
T ss_pred             ccccccccccCCCEEEEecCC------------------HHHHHHHHHHHHH--cCC-CEEEEEeec
Confidence            234556777789999988531                  1222345567877  443 666666543

Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....

>PRK11559 garR tartronate semialdehyde reductase; Provisional

Probab=97.01  E-value=0.0012  Score=58.33  Aligned_cols=66  Identities=12%  Similarity=0.244  Sum_probs=49.5

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcCCCcEEEECCC
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG  125 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~  125 (355)
                      +|+|.|+| .|.+|..+++.|.+.|++|++.+|++..........       +.  -.++..++++++|+||-+..
T Consensus         2 ~~~IgviG-~G~mG~~~a~~l~~~g~~v~~~d~~~~~~~~~~~~g-------~~--~~~~~~e~~~~~d~vi~~vp   67 (296)
T PRK11559          2 TMKVGFIG-LGIMGKPMSKNLLKAGYSLVVYDRNPEAVAEVIAAG-------AE--TASTAKAVAEQCDVIITMLP   67 (296)
T ss_pred             CceEEEEc-cCHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCC-------Ce--ecCCHHHHHhcCCEEEEeCC
Confidence            47899999 799999999999999999999999886654432211       11  12345566778999998864

>PLN02712 arogenate dehydrogenase

Probab=96.99  E-value=0.0019  Score=63.15  Aligned_cols=36  Identities=28%  Similarity=0.456  Sum_probs=32.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCc
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRS   85 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~   85 (355)
                      .+|+|.|+| .|.+|+.+++.|.+.|++|++++|+..
T Consensus        51 ~~~kIgIIG-~G~mG~slA~~L~~~G~~V~~~dr~~~   86 (667)
T PLN02712         51 TQLKIAIIG-FGNYGQFLAKTLISQGHTVLAHSRSDH   86 (667)
T ss_pred             CCCEEEEEc-cCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence            457999999 799999999999999999999999743

>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related

Probab=96.98  E-value=0.00085  Score=54.44  Aligned_cols=67  Identities=27%  Similarity=0.194  Sum_probs=48.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcCCCcEEEECCCC
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT  126 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~  126 (355)
                      ..++|.|+| .|.||+.+++.|..-|.+|++++|+.........       ..+   ...+++++++.+|+|+.+...
T Consensus        35 ~g~tvgIiG-~G~IG~~vA~~l~~fG~~V~~~d~~~~~~~~~~~-------~~~---~~~~l~ell~~aDiv~~~~pl  101 (178)
T PF02826_consen   35 RGKTVGIIG-YGRIGRAVARRLKAFGMRVIGYDRSPKPEEGADE-------FGV---EYVSLDELLAQADIVSLHLPL  101 (178)
T ss_dssp             TTSEEEEES-TSHHHHHHHHHHHHTT-EEEEEESSCHHHHHHHH-------TTE---EESSHHHHHHH-SEEEE-SSS
T ss_pred             CCCEEEEEE-EcCCcCeEeeeeecCCceeEEecccCChhhhccc-------ccc---eeeehhhhcchhhhhhhhhcc
Confidence            457999999 8999999999999999999999999876441110       112   344777888889998877654

All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....

>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain

Probab=96.97  E-value=0.00085  Score=48.27  Aligned_cols=66  Identities=23%  Similarity=0.309  Sum_probs=47.3

Q ss_pred             EEEEEcCCchHHHHHHHHHHhCC---CeEEEE-ecCCchhhccCCCCCCccCCCeeecCCcchhhhcCCCcEEEECCC
Q 018503           52 TVSVTGATGFIGRRLVQRLQADN---HQVRVL-TRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG  125 (355)
Q Consensus        52 ~IlVtGatG~iG~~l~~~L~~~g---~~V~~~-~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~  125 (355)
                      ||.|+| +|.+|.+|++.|++.|   ++|... +|++++...+....     . +.... .+..+++++.|+||.+.-
T Consensus         1 kI~iIG-~G~mg~al~~~l~~~g~~~~~v~~~~~r~~~~~~~~~~~~-----~-~~~~~-~~~~~~~~~advvilav~   70 (96)
T PF03807_consen    1 KIGIIG-AGNMGSALARGLLASGIKPHEVIIVSSRSPEKAAELAKEY-----G-VQATA-DDNEEAAQEADVVILAVK   70 (96)
T ss_dssp             EEEEES-TSHHHHHHHHHHHHTTS-GGEEEEEEESSHHHHHHHHHHC-----T-TEEES-EEHHHHHHHTSEEEE-S-
T ss_pred             CEEEEC-CCHHHHHHHHHHHHCCCCceeEEeeccCcHHHHHHHHHhh-----c-ccccc-CChHHhhccCCEEEEEEC
Confidence            588886 8999999999999999   999955 89888776554321     1 22222 245566668999998863

It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....

>PRK15057 UDP-glucose 6-dehydrogenase; Provisional

Probab=96.95  E-value=0.0088  Score=54.78  Aligned_cols=74  Identities=16%  Similarity=0.213  Sum_probs=49.1

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccC---------CCeeecCCcchhhhcCCCcEEE
Q 018503           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFF---------PGVMIAEEPQWRDCIQGSTAVV  121 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~---------~~~d~~~~~~~~~~~~~~d~vi  121 (355)
                      |||.|+| .|++|..++..|. .||+|++++++.++...+........-         ....+....+..++.+++|+||
T Consensus         1 mkI~VIG-lGyvGl~~A~~lA-~G~~VigvD~d~~kv~~l~~g~~~~~e~~l~~~l~~~~~~l~~t~~~~~~~~~ad~vi   78 (388)
T PRK15057          1 MKITISG-TGYVGLSNGLLIA-QNHEVVALDILPSRVAMLNDRISPIVDKEIQQFLQSDKIHFNATLDKNEAYRDADYVI   78 (388)
T ss_pred             CEEEEEC-CCHHHHHHHHHHH-hCCcEEEEECCHHHHHHHHcCCCCCCCcCHHHHHHhCCCcEEEecchhhhhcCCCEEE
Confidence            5899998 8999999996665 599999999998886655442110000         0112222223445567899999


Q ss_pred             ECCCC
Q 018503          122 NLAGT  126 (355)
Q Consensus       122 ~~a~~  126 (355)
                      -+..-
T Consensus        79 i~Vpt   83 (388)
T PRK15057         79 IATPT   83 (388)
T ss_pred             EeCCC
Confidence            88753

>smart00859 Semialdhyde_dh Semialdehyde dehydrogenase, NAD binding domain

Probab=96.92  E-value=0.0078  Score=45.42  Aligned_cols=72  Identities=21%  Similarity=0.248  Sum_probs=42.0

Q ss_pred             EEEEEcCCchHHHHHHHHHHhC-CCeEEEE-ecCCchhhccCCCCCCccCCCeeecCCcchhhhcCCCcEEEECCC
Q 018503           52 TVSVTGATGFIGRRLVQRLQAD-NHQVRVL-TRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG  125 (355)
Q Consensus        52 ~IlVtGatG~iG~~l~~~L~~~-g~~V~~~-~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~  125 (355)
                      ||.|+|++|.+|..+++.|.+. ++++.++ +|..+.................+..+.+.+.  ..++|+||.+.+
T Consensus         1 ki~iiG~~g~~g~~~~~~l~~~~~~~l~av~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~DvV~~~~~   74 (122)
T smart00859        1 KVAIVGATGYVGQELLRLLAEHPDFEVVALAASARSAGKRVSEAGPHLKGEVVLELEPEDFE--ELAVDIVFLALP   74 (122)
T ss_pred             CEEEECCCChHHHHHHHHHhcCCCceEEEEEechhhcCcCHHHHCcccccccccccccCChh--hcCCCEEEEcCC
Confidence            5889999999999999999995 8898888 4332222111110000000001122333333  247899998875

The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase, an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.

>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional

Probab=96.92  E-value=0.009  Score=53.61  Aligned_cols=35  Identities=17%  Similarity=0.290  Sum_probs=30.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCC-eEEEEecCC
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSR   84 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~   84 (355)
                      +.++|+|+| .|-+|+++++.|...|+ ++++++++.
T Consensus        23 ~~~~VlIiG-~GglGs~va~~La~aGvg~i~lvD~D~   58 (338)
T PRK12475         23 REKHVLIVG-AGALGAANAEALVRAGIGKLTIADRDY   58 (338)
T ss_pred             cCCcEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCc
Confidence            346899999 58899999999999997 888888875

>COG0136 Asd Aspartate-semialdehyde dehydrogenase [Amino acid transport and metabolism]

Probab=96.91  E-value=0.011  Score=51.95  Aligned_cols=25  Identities=36%  Similarity=0.644  Sum_probs=22.8

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCC
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADN   74 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g   74 (355)
                      +++|.|.||||.+|+.+++.|.++.
T Consensus         1 ~~~VavvGATG~VG~~~~~~L~e~~   25 (334)
T COG0136           1 KLNVAVLGATGAVGQVLLELLEERH   25 (334)
T ss_pred             CcEEEEEeccchHHHHHHHHHHhcC
Confidence            3689999999999999999999964

>PRK14618 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional

Probab=96.90  E-value=0.0021  Score=57.73  Aligned_cols=75  Identities=23%  Similarity=0.335  Sum_probs=49.8

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCc-cCCCee----ecCCcchhhhcCCCcEEEECC
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTR-FFPGVM----IAEEPQWRDCIQGSTAVVNLA  124 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~d----~~~~~~~~~~~~~~d~vi~~a  124 (355)
                      +|+|.|+| +|-+|..++..|.+.||+|++++|+++....+....... ...+..    +.-.++..+.++++|+||-+.
T Consensus         4 ~m~I~iIG-~G~mG~~ia~~L~~~G~~V~~~~r~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~~~e~~~~aD~Vi~~v   82 (328)
T PRK14618          4 GMRVAVLG-AGAWGTALAVLAASKGVPVRLWARRPEFAAALAAERENREYLPGVALPAELYPTADPEEALAGADFAVVAV   82 (328)
T ss_pred             CCeEEEEC-cCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHhCcccccCCCCcCCCCeEEeCCHHHHHcCCCEEEEEC
Confidence            47899998 799999999999999999999999876543332210000 000111    222334556677899999886


Q ss_pred             C
Q 018503          125 G  125 (355)
Q Consensus       125 ~  125 (355)
                      .
T Consensus        83 ~   83 (328)
T PRK14618         83 P   83 (328)
T ss_pred             c
Confidence            3

>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=96.90  E-value=0.0042  Score=49.62  Aligned_cols=56  Identities=21%  Similarity=0.342  Sum_probs=46.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcCCCcEEEECCCCC
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTP  127 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~~  127 (355)
                      ..++|+|+|+.+.+|..+++.|.++|.+|+++.|..                       +++.+.++++|+||.+.+.+
T Consensus        43 ~gk~vlViG~G~~~G~~~a~~L~~~g~~V~v~~r~~-----------------------~~l~~~l~~aDiVIsat~~~   98 (168)
T cd01080          43 AGKKVVVVGRSNIVGKPLAALLLNRNATVTVCHSKT-----------------------KNLKEHTKQADIVIVAVGKP   98 (168)
T ss_pred             CCCEEEEECCcHHHHHHHHHHHhhCCCEEEEEECCc-----------------------hhHHHHHhhCCEEEEcCCCC
Confidence            457999999877789999999999999999888752                       34556778899999998753

NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a

>PRK00094 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Validated

Probab=96.90  E-value=0.002  Score=57.74  Aligned_cols=74  Identities=19%  Similarity=0.341  Sum_probs=49.4

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCcc-CCCe----eecCCcchhhhcCCCcEEEECCC
Q 018503           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRF-FPGV----MIAEEPQWRDCIQGSTAVVNLAG  125 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~----d~~~~~~~~~~~~~~d~vi~~a~  125 (355)
                      |+|.|+| +|.+|..++..|.+.|++|++++|++.....+........ ....    ...-..+..+.++++|+||-+..
T Consensus         2 mkI~iiG-~G~mG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~vi~~v~   80 (325)
T PRK00094          2 MKIAVLG-AGSWGTALAIVLARNGHDVTLWARDPEQAAEINADRENPRYLPGIKLPDNLRATTDLAEALADADLILVAVP   80 (325)
T ss_pred             CEEEEEC-CCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHcCcccccCCCCcCCCCeEEeCCHHHHHhCCCEEEEeCC
Confidence            6899999 6999999999999999999999998765443322110000 0000    11122345556778999998863

>PRK11863 N-acetyl-gamma-glutamyl-phosphate reductase; Provisional

Probab=96.88  E-value=0.0036  Score=55.14  Aligned_cols=58  Identities=14%  Similarity=0.234  Sum_probs=41.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCC-CeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcCCCcEEEECCC
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADN-HQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG  125 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~  125 (355)
                      |+++|.|.||||++|..|++.|.++. .++..+..+...                ++   ......++++|+||.+..
T Consensus         1 ~~~~VaIvGAtGy~G~eLlrlL~~hp~~~l~~~~s~~~~----------------~~---~~~~~~~~~~DvvFlalp   59 (313)
T PRK11863          1 MKPKVFIDGEAGTTGLQIRERLAGRSDIELLSIPEAKRK----------------DA---AARRELLNAADVAILCLP   59 (313)
T ss_pred             CCcEEEEECCCCHHHHHHHHHHhcCCCeEEEEEecCCCC----------------cc---cCchhhhcCCCEEEECCC
Confidence            45799999999999999999999886 477776654322                11   112234567999998864

>PRK07417 arogenate dehydrogenase; Reviewed

Probab=96.88  E-value=0.0021  Score=56.29  Aligned_cols=66  Identities=23%  Similarity=0.258  Sum_probs=47.3

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcCCCcEEEECCC
Q 018503           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG  125 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~  125 (355)
                      |+|.|+| .|.+|..++..|.+.|++|++++|+++..........      ++... ... +.++++|+||-+..
T Consensus         1 m~I~IIG-~G~mG~sla~~L~~~g~~V~~~d~~~~~~~~a~~~g~------~~~~~-~~~-~~~~~aDlVilavp   66 (279)
T PRK07417          1 MKIGIVG-LGLIGGSLGLDLRSLGHTVYGVSRRESTCERAIERGL------VDEAS-TDL-SLLKDCDLVILALP   66 (279)
T ss_pred             CeEEEEe-ecHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCC------ccccc-CCH-hHhcCCCEEEEcCC
Confidence            5899999 8999999999999999999999998766544332211      11111 112 34678999998864

>COG0002 ArgC Acetylglutamate semialdehyde dehydrogenase [Amino acid transport and metabolism]

Probab=96.86  E-value=0.0025  Score=55.93  Aligned_cols=74  Identities=12%  Similarity=0.194  Sum_probs=44.3

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCC-CeEEEEecCCchhhccCCCCCC-ccCCCeeec--CCcchhhhcCCCcEEEECCC
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADN-HQVRVLTRSRSKAELIFPGKKT-RFFPGVMIA--EEPQWRDCIQGSTAVVNLAG  125 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~-~~~~~~d~~--~~~~~~~~~~~~d~vi~~a~  125 (355)
                      ++||.|.||+|+.|-.|++.|..+. .++..++.+......+...... .......+.  |.+.+  ..+++|+||.+..
T Consensus         2 ~~kV~IvGasGYtG~EL~rlL~~Hp~ve~~~~ss~~~~g~~~~~~~p~l~g~~~l~~~~~~~~~~--~~~~~DvvFlalP   79 (349)
T COG0002           2 MIKVGIVGASGYTGLELLRLLAGHPDVELILISSRERAGKPVSDVHPNLRGLVDLPFQTIDPEKI--ELDECDVVFLALP   79 (349)
T ss_pred             CceEEEEcCCCCcHHHHHHHHhcCCCeEEEEeechhhcCCchHHhCcccccccccccccCChhhh--hcccCCEEEEecC
Confidence            5799999999999999999999984 5777666555333322211000 000111111  22222  3456999998864

>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase

Probab=96.86  E-value=0.0019  Score=57.36  Aligned_cols=71  Identities=20%  Similarity=0.269  Sum_probs=53.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCC-CeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcCCCcEEEECCCC
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADN-HQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT  126 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~  126 (355)
                      ..++|+|+|+ |-+|+.+++.|...| .+|++++|+.++...+....      +.+..+.+++.+.+.++|+||.+.+.
T Consensus       177 ~~~~V~ViGa-G~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~la~~~------g~~~~~~~~~~~~l~~aDvVi~at~~  248 (311)
T cd05213         177 KGKKVLVIGA-GEMGELAAKHLAAKGVAEITIANRTYERAEELAKEL------GGNAVPLDELLELLNEADVVISATGA  248 (311)
T ss_pred             cCCEEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHc------CCeEEeHHHHHHHHhcCCEEEECCCC
Confidence            3579999995 999999999999876 78999999887655443321      12334445667777889999999875

Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,

>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]

Probab=96.86  E-value=0.0056  Score=52.56  Aligned_cols=102  Identities=18%  Similarity=0.195  Sum_probs=71.0

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCc---chhhhc-CCCcEEEECCC
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEP---QWRDCI-QGSTAVVNLAG  125 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~---~~~~~~-~~~d~vi~~a~  125 (355)
                      ..+|+|.||+|-+|+-..+--.-+|++|+++.-++++-..+.....  .-..+|...++   .+.+++ +++|+.|-|.|
T Consensus       151 GetvvVSaAaGaVGsvvgQiAKlkG~rVVGiaGg~eK~~~l~~~lG--fD~~idyk~~d~~~~L~~a~P~GIDvyfeNVG  228 (340)
T COG2130         151 GETVVVSAAAGAVGSVVGQIAKLKGCRVVGIAGGAEKCDFLTEELG--FDAGIDYKAEDFAQALKEACPKGIDVYFENVG  228 (340)
T ss_pred             CCEEEEEecccccchHHHHHHHhhCCeEEEecCCHHHHHHHHHhcC--CceeeecCcccHHHHHHHHCCCCeEEEEEcCC
Confidence            4689999999999998888777789999999999998877665322  02235555553   222333 48999999987


Q ss_pred             CCCCCCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCC
Q 018503          126 TPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGT  178 (355)
Q Consensus       126 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~  178 (355)
                      -                       .+++++-...+...|++.+.-.+.  |.+
T Consensus       229 g-----------------------~v~DAv~~~ln~~aRi~~CG~IS~--YN~  256 (340)
T COG2130         229 G-----------------------EVLDAVLPLLNLFARIPVCGAISQ--YNA  256 (340)
T ss_pred             c-----------------------hHHHHHHHhhccccceeeeeehhh--cCC
Confidence            4                       334444332233458888888877  874

>PRK07531 bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioesterase; Validated

Probab=96.85  E-value=0.0066  Score=57.65  Aligned_cols=75  Identities=15%  Similarity=0.145  Sum_probs=50.7

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCC----------CCCccC-CCeeecCCcchhhhcCCCc
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG----------KKTRFF-PGVMIAEEPQWRDCIQGST  118 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~----------~~~~~~-~~~d~~~~~~~~~~~~~~d  118 (355)
                      .|+|.|+| +|.+|..++..|++.|++|++.+++++....+...          ...... ....+.-.+++.++++++|
T Consensus         4 i~kIavIG-~G~MG~~iA~~la~~G~~V~v~D~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~i~~~~~~~ea~~~aD   82 (495)
T PRK07531          4 IMKAACIG-GGVIGGGWAARFLLAGIDVAVFDPHPEAERIIGEVLANAERAYAMLTDAPLPPEGRLTFCASLAEAVAGAD   82 (495)
T ss_pred             cCEEEEEC-cCHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHhhhccchhhhhhceEeeCCHHHHhcCCC
Confidence            36899998 89999999999999999999999987764432100          000000 0001222345667788999


Q ss_pred             EEEECCC
Q 018503          119 AVVNLAG  125 (355)
Q Consensus       119 ~vi~~a~  125 (355)
                      +||-+..
T Consensus        83 ~Vieavp   89 (495)
T PRK07531         83 WIQESVP   89 (495)
T ss_pred             EEEEcCc
Confidence            9998763

>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E

Probab=96.85  E-value=0.0093  Score=49.40  Aligned_cols=34  Identities=15%  Similarity=0.241  Sum_probs=30.1

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCC-eEEEEecCC
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSR   84 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~   84 (355)
                      ..+|+|.| .|-+|+++++.|...|. +++.++.+.
T Consensus        21 ~~~VlviG-~GglGs~ia~~La~~Gv~~i~lvD~d~   55 (202)
T TIGR02356        21 NSHVLIIG-AGGLGSPAALYLAGAGVGTIVIVDDDH   55 (202)
T ss_pred             CCCEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCCE
Confidence            45899999 89999999999999996 899888873

coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.

>TIGR00872 gnd_rel 6-phosphogluconate dehydrogenase (decarboxylating)

Probab=96.84  E-value=0.002  Score=56.95  Aligned_cols=68  Identities=15%  Similarity=0.244  Sum_probs=49.7

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcCCCcEEEECCC
Q 018503           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG  125 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~  125 (355)
                      |+|.|+| .|.+|..+++.|.+.||+|.+.+|++++...+.....      ....+.+++.+.+.++|+|+.+..
T Consensus         1 M~Ig~IG-lG~mG~~la~~L~~~g~~V~~~dr~~~~~~~l~~~g~------~~~~s~~~~~~~~~~~dvIi~~vp   68 (298)
T TIGR00872         1 MQLGLIG-LGRMGANIVRRLAKRGHDCVGYDHDQDAVKAMKEDRT------TGVANLRELSQRLSAPRVVWVMVP   68 (298)
T ss_pred             CEEEEEc-chHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCC------cccCCHHHHHhhcCCCCEEEEEcC
Confidence            5899999 7999999999999999999999999877655443211      111233444445567899888753

This family resembles a larger family (gnd) of bacterial and eukaryotic 6-phosphogluconate dehydrogenases but differs from it by a deep split in a UPGMA similarity clustering tree and the lack of a central region of about 140 residues. Among complete genomes, it is found is found in Bacillus subtilis and Mycobacterium tuberculosis, both of which also contain gnd, and in Aquifex aeolicus. The protein from Methylobacillus flagellatus KT has been characterized as a decarboxylating 6-phosphogluconate dehydrogenase as part of an unusual formaldehyde oxidation cycle. In some sequenced organisms members of this family are the sole 6-phosphogluconate dehydrogenase present and are probably active in the pentose phosphate cycle.

>PRK14619 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional

Probab=96.84  E-value=0.0038  Score=55.51  Aligned_cols=52  Identities=23%  Similarity=0.378  Sum_probs=42.2

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcCCCcEEEECC
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLA  124 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a  124 (355)
                      .|+|.|+| +|.+|++++..|.+.||+|++.+|+..                      +++.++++++|+||.+.
T Consensus         4 ~m~I~iiG-~G~~G~~lA~~l~~~G~~V~~~~r~~~----------------------~~~~~~~~~advvi~~v   55 (308)
T PRK14619          4 PKTIAILG-AGAWGSTLAGLASANGHRVRVWSRRSG----------------------LSLAAVLADADVIVSAV   55 (308)
T ss_pred             CCEEEEEC-ccHHHHHHHHHHHHCCCEEEEEeCCCC----------------------CCHHHHHhcCCEEEEEC
Confidence            47999998 799999999999999999999999753                      23445566778877775

>COG0240 GpsA Glycerol-3-phosphate dehydrogenase [Energy production and conversion]

Probab=96.84  E-value=0.011  Score=51.92  Aligned_cols=73  Identities=22%  Similarity=0.454  Sum_probs=53.2

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCC-CccCCCe----eecCCcchhhhcCCCcEEEECC
Q 018503           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKK-TRFFPGV----MIAEEPQWRDCIQGSTAVVNLA  124 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~----d~~~~~~~~~~~~~~d~vi~~a  124 (355)
                      |+|.|+| +|--|++|+..|.++||+|+...|+++....+..... ....+++    ++.-..++.++++++|+|+...
T Consensus         2 ~kI~ViG-aGswGTALA~~la~ng~~V~lw~r~~~~~~~i~~~~~N~~yLp~i~lp~~l~at~Dl~~a~~~ad~iv~av   79 (329)
T COG0240           2 MKIAVIG-AGSWGTALAKVLARNGHEVRLWGRDEEIVAEINETRENPKYLPGILLPPNLKATTDLAEALDGADIIVIAV   79 (329)
T ss_pred             ceEEEEc-CChHHHHHHHHHHhcCCeeEEEecCHHHHHHHHhcCcCccccCCccCCcccccccCHHHHHhcCCEEEEEC
Confidence            6899999 6999999999999999999999998776554433211 1112222    2333567888888999998765

>cd00300 LDH_like L-lactate dehydrogenase-like enzymes

Probab=96.84  E-value=0.011  Score=52.37  Aligned_cols=101  Identities=15%  Similarity=0.170  Sum_probs=67.6

Q ss_pred             EEEEcCCchHHHHHHHHHHhCC--CeEEEEecCCchhhccCCCCCCccC--CCeeecCCcchhhhcCCCcEEEECCCCCC
Q 018503           53 VSVTGATGFIGRRLVQRLQADN--HQVRVLTRSRSKAELIFPGKKTRFF--PGVMIAEEPQWRDCIQGSTAVVNLAGTPI  128 (355)
Q Consensus        53 IlVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~--~~~d~~~~~~~~~~~~~~d~vi~~a~~~~  128 (355)
                      |.|+| +|.+|..++-.|+..|  .+++.++++.+..............  ....+....+. +.++++|+||.++|.+.
T Consensus         1 i~iiG-aG~VG~~~a~~l~~~~~~~el~l~D~~~~~~~g~~~DL~~~~~~~~~~~i~~~~~~-~~l~~aDiVIitag~p~   78 (300)
T cd00300           1 ITIIG-AGNVGAAVAFALIAKGLASELVLVDVNEEKAKGDALDLSHASAFLATGTIVRGGDY-ADAADADIVVITAGAPR   78 (300)
T ss_pred             CEEEC-CCHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHhHHHhccccCCCeEEECCCH-HHhCCCCEEEEcCCCCC
Confidence            46888 5999999999999988  7899999987654332211100000  11122212223 57889999999999753


Q ss_pred             CCCCChhhHHHHHHHhhhhHHHHHHHHHcC
Q 018503          129 GTRWSSEIKKEIKESRIRVTSKVVDLINES  158 (355)
Q Consensus       129 ~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~  158 (355)
                      .   ...+..+.+..|+...+.+.+.+++.
T Consensus        79 ~---~~~~R~~l~~~n~~i~~~~~~~i~~~  105 (300)
T cd00300          79 K---PGETRLDLINRNAPILRSVITNLKKY  105 (300)
T ss_pred             C---CCCCHHHHHHHHHHHHHHHHHHHHHh
Confidence            2   22334577789999999999999884

Members of this subfamily are tetrameric NAD-dependent 2-hydroxycarboxylate dehydrogenases including LDHs, L-2-hydroxyisocaproate dehydrogenases (L-HicDH), and LDH-like malate dehydrogenases (MDH). Dehydrogenases catalyze the conversion of carbonyl compounds to alcohols or amino acids. LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. L-HicDH catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of prot

>PRK08293 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=96.82  E-value=0.0031  Score=55.49  Aligned_cols=74  Identities=14%  Similarity=0.142  Sum_probs=49.5

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCC-------CCc-cCCC--------eeecCCcchhhhc
Q 018503           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGK-------KTR-FFPG--------VMIAEEPQWRDCI  114 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-------~~~-~~~~--------~d~~~~~~~~~~~  114 (355)
                      ++|.|+| +|.+|..++..|++.|++|++++++.+.........       ... ....        -.+.-.+++.+++
T Consensus         4 ~kIaViG-aG~mG~~iA~~la~~G~~V~l~d~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~d~~~a~   82 (287)
T PRK08293          4 KNVTVAG-AGVLGSQIAFQTAFHGFDVTIYDISDEALEKAKERIAKLADRYVRDLEATKEAPAEAALNRITLTTDLAEAV   82 (287)
T ss_pred             cEEEEEC-CCHHHHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhHHHHHcCeEEeCCHHHHh
Confidence            6899999 699999999999999999999999876533221100       000 0000        0111134566778


Q ss_pred             CCCcEEEECCC
Q 018503          115 QGSTAVVNLAG  125 (355)
Q Consensus       115 ~~~d~vi~~a~  125 (355)
                      +++|+||-+..
T Consensus        83 ~~aDlVieavp   93 (287)
T PRK08293         83 KDADLVIEAVP   93 (287)
T ss_pred             cCCCEEEEecc
Confidence            89999999874

>PRK08057 cobalt-precorrin-6x reductase; Reviewed

Probab=96.82  E-value=0.0082  Score=51.16  Aligned_cols=95  Identities=12%  Similarity=0.064  Sum_probs=64.4

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcC--CCcEEEECCCCC
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ--GSTAVVNLAGTP  127 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--~~d~vi~~a~~~  127 (355)
                      +|+|||+|||+= |+.|++.|.+.|++|++.+-........ ....   .....+-+.+.+.++++  +++.||....+.
T Consensus         2 ~~~IlvlgGT~e-gr~la~~L~~~g~~v~~Svat~~g~~~~-~~~~---v~~G~l~~~~~l~~~l~~~~i~~VIDATHPf   76 (248)
T PRK08057          2 MPRILLLGGTSE-ARALARALAAAGVDIVLSLAGRTGGPAD-LPGP---VRVGGFGGAEGLAAYLREEGIDLVIDATHPY   76 (248)
T ss_pred             CceEEEEechHH-HHHHHHHHHhCCCeEEEEEccCCCCccc-CCce---EEECCCCCHHHHHHHHHHCCCCEEEECCCcc
Confidence            468999999875 9999999999999888766655333111 1100   11123337888988885  799999997642


Q ss_pred             CCCCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEE
Q 018503          128 IGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVL  167 (355)
Q Consensus       128 ~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~  167 (355)
                                      -...++++.++|++  .++..+-|
T Consensus        77 ----------------A~~is~~a~~ac~~--~~ipyiR~   98 (248)
T PRK08057         77 ----------------AAQISANAAAACRA--LGIPYLRL   98 (248)
T ss_pred             ----------------HHHHHHHHHHHHHH--hCCcEEEE
Confidence                            12345678899999  67764443

>PLN02353 probable UDP-glucose 6-dehydrogenase

Probab=96.80  E-value=0.0054  Score=57.49  Aligned_cols=77  Identities=14%  Similarity=0.238  Sum_probs=52.3

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhC--CCeEEEEecCCchhhccCCCCCCccCCCe----------eecCCcchhhhcCCC
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQAD--NHQVRVLTRSRSKAELIFPGKKTRFFPGV----------MIAEEPQWRDCIQGS  117 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~----------d~~~~~~~~~~~~~~  117 (355)
                      +|+|.|+| +|++|..++-.|.+.  |++|++++.++++...+........-+.+          .+.-..++.+.++++
T Consensus         1 ~m~I~ViG-~GyvGl~~A~~lA~~g~g~~V~gvD~~~~~v~~l~~g~~~~~e~gl~ell~~~~~~~l~~t~~~~~~i~~a   79 (473)
T PLN02353          1 MVKICCIG-AGYVGGPTMAVIALKCPDIEVVVVDISVPRIDAWNSDQLPIYEPGLDEVVKQCRGKNLFFSTDVEKHVAEA   79 (473)
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHhcCCCCeEEEEECCHHHHHHHHcCCCccCCCCHHHHHHHhhcCCEEEEcCHHHHHhcC
Confidence            37899998 899999999999988  58899999998876664433210000000          011122345567789


Q ss_pred             cEEEECCCCC
Q 018503          118 TAVVNLAGTP  127 (355)
Q Consensus       118 d~vi~~a~~~  127 (355)
                      |++|-|.+-+
T Consensus        80 dvi~I~V~TP   89 (473)
T PLN02353         80 DIVFVSVNTP   89 (473)
T ss_pred             CEEEEEeCCC
Confidence            9999998754

>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

Probab=96.80  E-value=0.0053  Score=54.93  Aligned_cols=74  Identities=28%  Similarity=0.234  Sum_probs=50.7

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCc---chhhhcC--CCcEEEECC
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEP---QWRDCIQ--GSTAVVNLA  124 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~---~~~~~~~--~~d~vi~~a  124 (355)
                      ..+|||+||+|.+|...++.+...|+.+++++.++++.......+.   ...+++.+.+   .+.++..  ++|+|+.+.
T Consensus       143 g~~VLV~gaaGgVG~~aiQlAk~~G~~~v~~~~s~~k~~~~~~lGA---d~vi~y~~~~~~~~v~~~t~g~gvDvv~D~v  219 (326)
T COG0604         143 GETVLVHGAAGGVGSAAIQLAKALGATVVAVVSSSEKLELLKELGA---DHVINYREEDFVEQVRELTGGKGVDVVLDTV  219 (326)
T ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHhcCC---CEEEcCCcccHHHHHHHHcCCCCceEEEECC
Confidence            5689999999999999999999999777777776665554443322   1223444433   2333333  699999998


Q ss_pred             CC
Q 018503          125 GT  126 (355)
Q Consensus       125 ~~  126 (355)
                      |.
T Consensus       220 G~  221 (326)
T COG0604         220 GG  221 (326)
T ss_pred             CH
Confidence            73

>PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate

Probab=96.79  E-value=0.0033  Score=49.83  Aligned_cols=72  Identities=19%  Similarity=0.428  Sum_probs=48.1

Q ss_pred             EEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCC-ccCCCee----ecCCcchhhhcCCCcEEEECC
Q 018503           52 TVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKT-RFFPGVM----IAEEPQWRDCIQGSTAVVNLA  124 (355)
Q Consensus        52 ~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~d----~~~~~~~~~~~~~~d~vi~~a  124 (355)
                      ||.|+| +|..|.+++..|.++||+|+..+|+++....+...... .......    +.=.+++.++++++|+||.+.
T Consensus         1 KI~ViG-aG~~G~AlA~~la~~g~~V~l~~~~~~~~~~i~~~~~n~~~~~~~~l~~~i~~t~dl~~a~~~ad~Iiiav   77 (157)
T PF01210_consen    1 KIAVIG-AGNWGTALAALLADNGHEVTLWGRDEEQIEEINETRQNPKYLPGIKLPENIKATTDLEEALEDADIIIIAV   77 (157)
T ss_dssp             EEEEES-SSHHHHHHHHHHHHCTEEEEEETSCHHHHHHHHHHTSETTTSTTSBEETTEEEESSHHHHHTT-SEEEE-S
T ss_pred             CEEEEC-cCHHHHHHHHHHHHcCCEEEEEeccHHHHHHHHHhCCCCCCCCCcccCcccccccCHHHHhCcccEEEecc
Confidence            689999 79999999999999999999999997654433221100 0011111    112356778889999999775

This family represents the N-terminal NAD-binding domain [].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0046168 glycerol-3-phosphate catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 1YJ8_B 2PLA_A 1WPQ_B 1X0V_A 1X0X_A 1BG6_A 1TXG_B 1N1G_A 1M67_A 1JDJ_A ....

>TIGR01035 hemA glutamyl-tRNA reductase

Probab=96.79  E-value=0.0025  Score=59.09  Aligned_cols=71  Identities=15%  Similarity=0.223  Sum_probs=53.0

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCC-CeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcCCCcEEEECCCCC
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADN-HQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTP  127 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~~  127 (355)
                      .++|+|+|+ |-+|..+++.|...| .+|++++|+.++...+....     . ....+.+++.+.+.++|+||.+.+.+
T Consensus       180 ~~~VlViGa-G~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~la~~~-----g-~~~i~~~~l~~~l~~aDvVi~aT~s~  251 (417)
T TIGR01035       180 GKKALLIGA-GEMGELVAKHLLRKGVGKILIANRTYERAEDLAKEL-----G-GEAVKFEDLEEYLAEADIVISSTGAP  251 (417)
T ss_pred             CCEEEEECC-hHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHc-----C-CeEeeHHHHHHHHhhCCEEEECCCCC
Confidence            468999995 999999999999999 78999999887654333221     1 12233456677788999999997653

This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.

>PRK11880 pyrroline-5-carboxylate reductase; Reviewed

Probab=96.78  E-value=0.0022  Score=55.82  Aligned_cols=66  Identities=20%  Similarity=0.209  Sum_probs=47.7

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCC---CeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcCCCcEEEECC
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADN---HQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLA  124 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g---~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a  124 (355)
                      +|+|.|+| .|.+|..++..|.+.|   ++|.+++|+++....+....      ++.+.  ++..+.+.++|+||-+.
T Consensus         2 mm~I~iIG-~G~mG~~la~~l~~~g~~~~~v~v~~r~~~~~~~~~~~~------g~~~~--~~~~~~~~~advVil~v   70 (267)
T PRK11880          2 MKKIGFIG-GGNMASAIIGGLLASGVPAKDIIVSDPSPEKRAALAEEY------GVRAA--TDNQEAAQEADVVVLAV   70 (267)
T ss_pred             CCEEEEEe-chHHHHHHHHHHHhCCCCcceEEEEcCCHHHHHHHHHhc------CCeec--CChHHHHhcCCEEEEEc
Confidence            57899999 6999999999999988   78999999876654433211      12222  23344567899999875

>TIGR01745 asd_gamma aspartate-semialdehyde dehydrogenase, gamma-proteobacterial

Probab=96.78  E-value=0.015  Score=52.22  Aligned_cols=70  Identities=17%  Similarity=0.236  Sum_probs=41.6

Q ss_pred             CEEEEEcCCchHHHHHHHHHH-hCCC---eEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcCCCcEEEECCCC
Q 018503           51 MTVSVTGATGFIGRRLVQRLQ-ADNH---QVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT  126 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~-~~g~---~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~  126 (355)
                      |+|.|.||||.+|+.+++.|. ++++   +++.+..+.+........     .....+.+.+.. ..+.++|+++.+++.
T Consensus         1 ~~VavvGATG~VG~~ll~~L~~e~~fp~~~~~~~ss~~s~g~~~~f~-----~~~~~v~~~~~~-~~~~~vDivffa~g~   74 (366)
T TIGR01745         1 KNVGLVGWRGMVGSVLMQRMQEERDFDAIRPVFFSTSQLGQAAPSFG-----GTTGTLQDAFDI-DALKALDIIITCQGG   74 (366)
T ss_pred             CeEEEEcCcCHHHHHHHHHHHhCCCCccccEEEEEchhhCCCcCCCC-----CCcceEEcCccc-ccccCCCEEEEcCCH
Confidence            479999999999999999999 5554   344444332222211111     011222222222 245789999999873

>TIGR00978 asd_EA aspartate-semialdehyde dehydrogenase (non-peptidoglycan organisms)

Probab=96.77  E-value=0.014  Score=52.64  Aligned_cols=34  Identities=32%  Similarity=0.549  Sum_probs=29.0

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhCC-CeEEEEecCC
Q 018503           51 MTVSVTGATGFIGRRLVQRLQADN-HQVRVLTRSR   84 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~   84 (355)
                      |||+|+|++|++|++|++.|.+++ .+|..+..+.
T Consensus         1 ~kVaIvGatG~~G~~L~~~l~~~~~~~l~~v~~~~   35 (341)
T TIGR00978         1 MRVAVLGATGLVGQKFVKLLAKHPYFELAKVVASP   35 (341)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCceEEEEEECh
Confidence            589999999999999999998876 6888885443

Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. Separate models are built for the two types in order to exclude the USG-1 protein, found in several species, which is specifically related to the Bacillus subtilis type of aspartate-semialdehyde dehydrogenase. Members of this type are found primarily in organisms that lack peptidoglycan.

>PF13950 Epimerase_Csub: UDP-glucose 4-epimerase C-term subunit; PDB: 1EK5_A 1I3K_B 1I3M_B 1HZJ_A 1EK6_A 1I3N_A 1I3L_A 2CNB_B 1GY8_D 1NAI_A

Probab=96.77  E-value=0.00056  Score=44.52  Aligned_cols=51  Identities=24%  Similarity=0.341  Sum_probs=24.8

Q ss_pred             HHHHHhCCCCCCCCcHHHHHHHhcccceeeecCccccchhH-HhCCCCCCccCHHHHHHHHh
Q 018503          294 HLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARA-KELGFPFKYRYVKDALKAIM  354 (355)
Q Consensus       294 ~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~-~~lG~~p~~~~~~~~l~~~~  354 (355)
                      +++++.|++..+.+    .....|+....+.+..     |+ +.|||+|+++ ++++|++++
T Consensus         1 A~e~vtG~~i~~~~----~~rR~GD~~~~~Ad~~-----kA~~~LgW~p~~~-L~~~i~~~w   52 (62)
T PF13950_consen    1 AFEKVTGKKIPVEY----APRRPGDPAHLVADIS-----KAREELGWKPKYS-LEDMIRDAW   52 (62)
T ss_dssp             HHHHHHTS---EEE----E---TT--SEE-B--H-----HHHHHC----SSS-HHHHHHHHH
T ss_pred             CcHHHHCCCCCceE----CCCCCCchhhhhCCHH-----HHHHHhCCCcCCC-HHHHHHHHH
Confidence            46778887632222    2234566655555544     46 5699999995 999999875

...

>PRK07502 cyclohexadienyl dehydrogenase; Validated

Probab=96.74  E-value=0.0038  Score=55.49  Aligned_cols=69  Identities=14%  Similarity=0.135  Sum_probs=48.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCC--eEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcCCCcEEEECCC
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNH--QVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG  125 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~  125 (355)
                      +.++|.|+| +|.+|..++..|.+.|+  +|++++|+++.........    .. ...  .....+.++++|+||.+..
T Consensus         5 ~~~~I~IIG-~G~mG~sla~~l~~~g~~~~V~~~dr~~~~~~~a~~~g----~~-~~~--~~~~~~~~~~aDvViiavp   75 (307)
T PRK07502          5 LFDRVALIG-IGLIGSSLARAIRRLGLAGEIVGADRSAETRARARELG----LG-DRV--TTSAAEAVKGADLVILCVP   75 (307)
T ss_pred             CCcEEEEEe-eCHHHHHHHHHHHhcCCCcEEEEEECCHHHHHHHHhCC----CC-cee--cCCHHHHhcCCCEEEECCC
Confidence            346899999 89999999999999884  8999999876544332211    00 011  1234456678999999975

>cd01339 LDH-like_MDH L-lactate dehydrogenase-like malate dehydrogenase proteins

Probab=96.74  E-value=0.017  Score=51.14  Aligned_cols=100  Identities=20%  Similarity=0.254  Sum_probs=64.5

Q ss_pred             EEEEcCCchHHHHHHHHHHhCCC-eEEEEecCCchhhcc----CCCCCCccCCCeeecCCcchhhhcCCCcEEEECCCCC
Q 018503           53 VSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRSKAELI----FPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTP  127 (355)
Q Consensus        53 IlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~----~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~~  127 (355)
                      |.|+|+ |.+|..++..|+..|. +|+.++++++.....    ..... .......+....+. +.++++|+||.+++.+
T Consensus         1 I~IIGa-G~vG~~ia~~la~~~l~eV~L~Di~e~~~~g~~~dl~~~~~-~~~~~~~I~~t~d~-~~l~dADiVIit~g~p   77 (300)
T cd01339           1 ISIIGA-GNVGATLAQLLALKELGDVVLLDIVEGLPQGKALDISQAAP-ILGSDTKVTGTNDY-EDIAGSDVVVITAGIP   77 (300)
T ss_pred             CEEECC-CHHHHHHHHHHHhCCCcEEEEEeCCCcHHHHHHHHHHHhhh-hcCCCeEEEEcCCH-HHhCCCCEEEEecCCC
Confidence            568997 9999999999998876 999999987643211    11000 00111233322234 4578999999999875


Q ss_pred             CCCCCChhhHHHHHHHhhhhHHHHHHHHHcC
Q 018503          128 IGTRWSSEIKKEIKESRIRVTSKVVDLINES  158 (355)
Q Consensus       128 ~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~  158 (355)
                      ....   ....+....|+...+.+++.+.+.
T Consensus        78 ~~~~---~~r~e~~~~n~~i~~~i~~~i~~~  105 (300)
T cd01339          78 RKPG---MSRDDLLGTNAKIVKEVAENIKKY  105 (300)
T ss_pred             CCcC---CCHHHHHHHHHHHHHHHHHHHHHH
Confidence            3322   223356667888888888888773

Members of this subfamily have an LDH-like structure and an MDH enzymatic activity. Some members, like MJ0490 from Methanococcus jannaschii, exhibit both MDH and LDH activities. Tetrameric MDHs, including those from phototrophic bacteria, are more similar to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenas

>KOG1496 consensus Malate dehydrogenase [Energy production and conversion]

Probab=96.73  E-value=0.013  Score=48.53  Aligned_cols=168  Identities=14%  Similarity=0.212  Sum_probs=84.0

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhC---C--CeE--EEEecCCchhhccCCCCCC---ccCCC-eeecCCcchhhhcCCCc
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQAD---N--HQV--RVLTRSRSKAELIFPGKKT---RFFPG-VMIAEEPQWRDCIQGST  118 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~---g--~~V--~~~~r~~~~~~~~~~~~~~---~~~~~-~d~~~~~~~~~~~~~~d  118 (355)
                      +-+|+||||+|+||.+|+..+.+-   |  ..|  ..++..+. ...+.....+   -.++- .++.-..+-..+++++|
T Consensus         4 pirVlVtGAAGqI~ysll~~ia~G~vfG~dQPiiL~lLdi~~~-~~~LegV~mELqD~a~PlL~~Vvattd~~~afkdv~   82 (332)
T KOG1496|consen    4 PIRVLVTGAAGQIGYSLLPMIARGIVFGKDQPIILHLLDIPPM-MSVLEGVKMELQDCALPLLKGVVATTDEVEAFKDVD   82 (332)
T ss_pred             ceEEEeecccchhhHHHHHHHcCceeecCCCceEEEeeCCchH-HHHHHHHHHHHHhhhhhHHHhhhcccChhhhhccCc
Confidence            468999999999999999988762   2  122  22222211 1111000000   00000 11122334456788999


Q ss_pred             EEEECCCCCCCCCCChhhHHHHHHHhhhhHHHHHHHHHcCC-CCCCcEEEEeeeeeeeeCCCCCccccCCCCC--CChh-
Q 018503          119 AVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESP-EGVRPSVLVSATALGYYGTSETEVFDESSPS--GNDY-  194 (355)
Q Consensus       119 ~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~--~~~y-  194 (355)
                      +.|...+.+...   .-...+++..|+...+.--.++.+.+ .++ +++.+...+-     .......+..|.  ...+ 
T Consensus        83 ~ailvGa~PR~e---GMERkDll~~NvkIfk~Qg~AL~k~A~~~~-KVlVVgNPaN-----TNali~~k~ApsIP~kNfs  153 (332)
T KOG1496|consen   83 VAILVGAMPRRE---GMERKDLLSANVKIFKSQGAALEKYAKPNV-KVLVVGNPAN-----TNALILKKFAPSIPEKNFS  153 (332)
T ss_pred             EEEEeccccCcc---cchhhhHHhhcceeehhhhHHHHHhcCCCc-eEEEecCccc-----cchhHHhhhCCCCchhcch
Confidence            999998875332   22235778888877666555655532 344 4545443221     111111122221  1112 


Q ss_pred             -HHHHHHHHHHHHhccCCCCeEEEEEecEEEeCC
Q 018503          195 -LAEVCREWEGTALKVNKDVRLALIRIGIVLGKD  227 (355)
Q Consensus       195 -~~k~~~~~~~~~~~~~~~~~~~i~Rp~~i~G~~  227 (355)
                       ..++-..........+.|.++.-+.--.|+|..
T Consensus       154 ~lTRLDhNRA~~QlA~klgv~~~~VkNviIWGNH  187 (332)
T KOG1496|consen  154 ALTRLDHNRALAQLALKLGVPVSDVKNVIIWGNH  187 (332)
T ss_pred             hhhhhchhhHHHHHHHhhCCchhhcceeEEeccc
Confidence             222222222233333457888888878888875

>PRK06598 aspartate-semialdehyde dehydrogenase; Reviewed

Probab=96.73  E-value=0.0052  Score=55.25  Aligned_cols=33  Identities=24%  Similarity=0.429  Sum_probs=25.8

Q ss_pred             CEEEEEcCCchHHHHHHHHHHh-CCCe---EEEEecC
Q 018503           51 MTVSVTGATGFIGRRLVQRLQA-DNHQ---VRVLTRS   83 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~-~g~~---V~~~~r~   83 (355)
                      ++|.|.||||++|+.+++.|++ ....   ++.++.+
T Consensus         2 ~~VAIVGATG~vG~ell~llL~~~~f~~~~l~~~ss~   38 (369)
T PRK06598          2 KKVGFVGWRGMVGSVLMQRMVEENDFDLIEPVFFSTS   38 (369)
T ss_pred             eEEEEEeCCCHHHHHHHHHHHhCCCCCcCcEEEecch
Confidence            6899999999999999995655 4555   6665543

>PRK12549 shikimate 5-dehydrogenase; Reviewed

Probab=96.72  E-value=0.0027  Score=55.59  Aligned_cols=74  Identities=12%  Similarity=0.166  Sum_probs=52.0

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCC-eEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcCCCcEEEECCC
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG  125 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~  125 (355)
                      .++|+|+| +|..|++++..|.+.|. +|++++|+..+...+...... ......+...+.+.+.+.++|+||++..
T Consensus       127 ~k~vlIlG-aGGaaraia~aL~~~G~~~I~I~nR~~~ka~~la~~l~~-~~~~~~~~~~~~~~~~~~~aDiVInaTp  201 (284)
T PRK12549        127 LERVVQLG-AGGAGAAVAHALLTLGVERLTIFDVDPARAAALADELNA-RFPAARATAGSDLAAALAAADGLVHATP  201 (284)
T ss_pred             CCEEEEEC-CcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHh-hCCCeEEEeccchHhhhCCCCEEEECCc
Confidence            46899999 68899999999999996 899999998776654332100 0111233333445556788999999953

>PRK04148 hypothetical protein; Provisional

Probab=96.70  E-value=0.007  Score=45.98  Aligned_cols=68  Identities=9%  Similarity=0.023  Sum_probs=48.0

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcCCCcEEEEC
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNL  123 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~  123 (355)
                      .++|+++| +| .|.+++..|.+.|++|++++.++...........  .....|+.+++.  ++-+++|.|+-+
T Consensus        17 ~~kileIG-~G-fG~~vA~~L~~~G~~ViaIDi~~~aV~~a~~~~~--~~v~dDlf~p~~--~~y~~a~liysi   84 (134)
T PRK04148         17 NKKIVELG-IG-FYFKVAKKLKESGFDVIVIDINEKAVEKAKKLGL--NAFVDDLFNPNL--EIYKNAKLIYSI   84 (134)
T ss_pred             CCEEEEEE-ec-CCHHHHHHHHHCCCEEEEEECCHHHHHHHHHhCC--eEEECcCCCCCH--HHHhcCCEEEEe
Confidence            36899999 78 8999999999999999999999886543322211  023346665541  334678988866

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=96.69  E-value=0.0068  Score=57.08  Aligned_cols=76  Identities=18%  Similarity=0.239  Sum_probs=53.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhh-hcCCCcEEEECCC
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRD-CIQGSTAVVNLAG  125 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~-~~~~~d~vi~~a~  125 (355)
                      .+++|+|+|+ |.+|+.+++.|.+.|++|++++++++....+............|..+.+.+.+ .++++|+||-+..
T Consensus       230 ~~~~iiIiG~-G~~g~~l~~~L~~~~~~v~vid~~~~~~~~~~~~~~~~~~i~gd~~~~~~L~~~~~~~a~~vi~~~~  306 (453)
T PRK09496        230 PVKRVMIVGG-GNIGYYLAKLLEKEGYSVKLIERDPERAEELAEELPNTLVLHGDGTDQELLEEEGIDEADAFIALTN  306 (453)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHCCCCeEEECCCCCHHHHHhcCCccCCEEEECCC
Confidence            3578999995 99999999999999999999999987654433211000122346667776644 3468899986653

>PLN00203 glutamyl-tRNA reductase

Probab=96.68  E-value=0.0036  Score=59.22  Aligned_cols=74  Identities=19%  Similarity=0.248  Sum_probs=54.7

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCC-eEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcCCCcEEEECCCCC
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTP  127 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~~  127 (355)
                      .++|+|+|+ |-+|+.+++.|...|. +|+++.|+.++...+.....   ...+.+...+++.+.+.++|+||.+.+.+
T Consensus       266 ~kkVlVIGA-G~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~~---g~~i~~~~~~dl~~al~~aDVVIsAT~s~  340 (519)
T PLN00203        266 SARVLVIGA-GKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEFP---DVEIIYKPLDEMLACAAEADVVFTSTSSE  340 (519)
T ss_pred             CCEEEEEeC-HHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHhC---CCceEeecHhhHHHHHhcCCEEEEccCCC
Confidence            478999996 9999999999999996 79999999877665543210   01123334456677788999999987643

>PRK06728 aspartate-semialdehyde dehydrogenase; Provisional

Probab=96.68  E-value=0.0072  Score=54.01  Aligned_cols=68  Identities=25%  Similarity=0.391  Sum_probs=41.9

Q ss_pred             CEEEEEcCCchHHHHHHHHHHh-CCCe---EEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcCCCcEEEECCC
Q 018503           51 MTVSVTGATGFIGRRLVQRLQA-DNHQ---VRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG  125 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~-~g~~---V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~  125 (355)
                      ++|.|+||||++|+.+++.|.+ ...+   +..+....+......-.     ...+.+.+.+.  ..+.++|+||.+++
T Consensus         6 ~~VaIvGATG~vG~ell~lL~~h~~f~v~~l~~~aS~~saGk~~~~~-----~~~l~v~~~~~--~~~~~~Divf~a~~   77 (347)
T PRK06728          6 YHVAVVGATGAVGQKIIELLEKETKFNIAEVTLLSSKRSAGKTVQFK-----GREIIIQEAKI--NSFEGVDIAFFSAG   77 (347)
T ss_pred             CEEEEEeCCCHHHHHHHHHHHHCCCCCcccEEEEECcccCCCCeeeC-----CcceEEEeCCH--HHhcCCCEEEECCC
Confidence            6999999999999999999995 5666   55555443333322111     01122222221  12367899998875

>PRK00045 hemA glutamyl-tRNA reductase; Reviewed

Probab=96.68  E-value=0.0031  Score=58.57  Aligned_cols=72  Identities=19%  Similarity=0.254  Sum_probs=53.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCC-eEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcCCCcEEEECCCCC
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTP  127 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~~  127 (355)
                      ..++|+|+| +|-+|+.+++.|...|. +|++++|+..+...+....     . .+..+.+++.+.+.++|+||.+.+.+
T Consensus       181 ~~~~vlViG-aG~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la~~~-----g-~~~~~~~~~~~~l~~aDvVI~aT~s~  253 (423)
T PRK00045        181 SGKKVLVIG-AGEMGELVAKHLAEKGVRKITVANRTLERAEELAEEF-----G-GEAIPLDELPEALAEADIVISSTGAP  253 (423)
T ss_pred             cCCEEEEEC-chHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHc-----C-CcEeeHHHHHHHhccCCEEEECCCCC
Confidence            347899999 59999999999999997 8999999877654433221     1 13334456667778999999998753

>COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 [Coenzyme metabolism]

Probab=96.67  E-value=0.015  Score=48.29  Aligned_cols=99  Identities=14%  Similarity=0.243  Sum_probs=61.2

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhCCC-eEEEEecCC-------chhhccCCCCCC-----------ccCCC------eeec
Q 018503           51 MTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSR-------SKAELIFPGKKT-----------RFFPG------VMIA  105 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~-------~~~~~~~~~~~~-----------~~~~~------~d~~  105 (355)
                      -+|+|+| -|.+|++.++.|.+.|. +++.++-+.       .....+......           ...+.      -++.
T Consensus        31 ~~V~VvG-iGGVGSw~veALaRsGig~itlID~D~v~vTN~NRQi~A~~~~iGk~Kv~vm~eri~~InP~c~V~~~~~f~  109 (263)
T COG1179          31 AHVCVVG-IGGVGSWAVEALARSGIGRITLIDMDDVCVTNTNRQIHALLGDIGKPKVEVMKERIKQINPECEVTAINDFI  109 (263)
T ss_pred             CcEEEEe-cCchhHHHHHHHHHcCCCeEEEEecccccccccchhhHhhhhhcccHHHHHHHHHHHhhCCCceEeehHhhh
Confidence            4799999 69999999999999985 566655432       111111111000           00111      1334


Q ss_pred             CCcchhhhcC-CCcEEEECCCCCCCCCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeee
Q 018503          106 EEPQWRDCIQ-GSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATAL  173 (355)
Q Consensus       106 ~~~~~~~~~~-~~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~  173 (355)
                      .++.+++++. ++|+||.+.-                  |+..-..|+..|.+  .+.   -++||+++
T Consensus       110 t~en~~~~~~~~~DyvIDaiD------------------~v~~Kv~Li~~c~~--~ki---~vIss~Ga  155 (263)
T COG1179         110 TEENLEDLLSKGFDYVIDAID------------------SVRAKVALIAYCRR--NKI---PVISSMGA  155 (263)
T ss_pred             CHhHHHHHhcCCCCEEEEchh------------------hhHHHHHHHHHHHH--cCC---CEEeeccc
Confidence            6677777774 6999999852                  33444478889998  444   37788776

>PRK09288 purT phosphoribosylglycinamide formyltransferase 2; Validated

Probab=96.64  E-value=0.0045  Score=57.15  Aligned_cols=71  Identities=15%  Similarity=0.174  Sum_probs=51.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcC--CCcEEEECC
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ--GSTAVVNLA  124 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--~~d~vi~~a  124 (355)
                      .+|+|+|+| +|.+|+.++..+.+.|++|++++.++..........    ...+|..|.+.+.++++  ++|.|+...
T Consensus        11 ~~~~ilIiG-~g~~~~~~~~a~~~~G~~v~~~~~~~~~~~~~~ad~----~~~~~~~d~~~l~~~~~~~~id~vi~~~   83 (395)
T PRK09288         11 SATRVMLLG-SGELGKEVAIEAQRLGVEVIAVDRYANAPAMQVAHR----SHVIDMLDGDALRAVIEREKPDYIVPEI   83 (395)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCCCCchHHhhhh----eEECCCCCHHHHHHHHHHhCCCEEEEee
Confidence            457999999 589999999999999999999998875432221110    22345667777777776  789888653

>PRK15461 NADH-dependent gamma-hydroxybutyrate dehydrogenase; Provisional

Probab=96.63  E-value=0.0038  Score=55.13  Aligned_cols=65  Identities=14%  Similarity=0.269  Sum_probs=49.6

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcCCCcEEEECCC
Q 018503           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG  125 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~  125 (355)
                      ++|.|+| .|.+|..++..|++.||+|++.+|++++...+....       .  ....+..++++++|+||-+..
T Consensus         2 ~~Ig~IG-lG~mG~~mA~~l~~~G~~V~v~d~~~~~~~~~~~~g-------~--~~~~s~~~~~~~aDvVi~~vp   66 (296)
T PRK15461          2 AAIAFIG-LGQMGSPMASNLLKQGHQLQVFDVNPQAVDALVDKG-------A--TPAASPAQAAAGAEFVITMLP   66 (296)
T ss_pred             CeEEEEe-eCHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHcC-------C--cccCCHHHHHhcCCEEEEecC
Confidence            4799999 899999999999999999999999987765543321       1  122345566778999988864

>PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=96.62  E-value=0.0064  Score=57.18  Aligned_cols=74  Identities=15%  Similarity=0.054  Sum_probs=46.3

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcC-CCcEEEECCCCC
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ-GSTAVVNLAGTP  127 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-~~d~vi~~a~~~  127 (355)
                      .++|+|+|++| +|.+.++.|++.|++|++.++.............   ..++++.....-...+. ++|.||.+.|.+
T Consensus         5 ~k~v~v~G~g~-~G~s~a~~l~~~G~~V~~~d~~~~~~~~~~~~l~---~~g~~~~~~~~~~~~~~~~~d~vV~s~gi~   79 (447)
T PRK02472          5 NKKVLVLGLAK-SGYAAAKLLHKLGANVTVNDGKPFSENPEAQELL---EEGIKVICGSHPLELLDEDFDLMVKNPGIP   79 (447)
T ss_pred             CCEEEEEeeCH-HHHHHHHHHHHCCCEEEEEcCCCccchhHHHHHH---hcCCEEEeCCCCHHHhcCcCCEEEECCCCC
Confidence            46899999877 9999999999999999999876532211100000   11123221111112233 489999999874

>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB

Probab=96.61  E-value=0.019  Score=48.90  Aligned_cols=35  Identities=23%  Similarity=0.222  Sum_probs=29.5

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCC-eEEEEecCCc
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRS   85 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~   85 (355)
                      ..+|+|.| .|.+|+.+++.|...|. +++.++.+.-
T Consensus        24 ~~~VlvvG-~GglGs~va~~La~~Gvg~i~lvD~D~v   59 (240)
T TIGR02355        24 ASRVLIVG-LGGLGCAASQYLAAAGVGNLTLLDFDTV   59 (240)
T ss_pred             CCcEEEEC-cCHHHHHHHHHHHHcCCCEEEEEeCCcc
Confidence            45899999 79999999999999984 7888787643

This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).

>PRK06019 phosphoribosylaminoimidazole carboxylase ATPase subunit; Reviewed

Probab=96.61  E-value=0.0047  Score=56.46  Aligned_cols=68  Identities=15%  Similarity=0.154  Sum_probs=51.6

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcCCCcEEEE
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVN  122 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~  122 (355)
                      +|+|+|+|+ |++|+.++..+.+.|++|++++.++..........    ....++.|.+.+.++.+.+|+|..
T Consensus         2 ~~~igilG~-Gql~~ml~~aa~~lG~~v~~~d~~~~~pa~~~ad~----~~~~~~~D~~~l~~~a~~~dvit~   69 (372)
T PRK06019          2 MKTIGIIGG-GQLGRMLALAAAPLGYKVIVLDPDPDSPAAQVADE----VIVADYDDVAALRELAEQCDVITY   69 (372)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCCCCchhHhCce----EEecCCCCHHHHHHHHhcCCEEEe
Confidence            368999995 89999999999999999999998765433222111    223467788889888889998754

>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2

Probab=96.61  E-value=0.014  Score=48.20  Aligned_cols=34  Identities=21%  Similarity=0.307  Sum_probs=30.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCC-eEEEEecC
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRS   83 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~   83 (355)
                      ...+|+|.| .|.+|+.++..|.+.|. +++.++++
T Consensus        20 ~~~~V~IvG-~GglGs~ia~~La~~Gvg~i~lvD~D   54 (200)
T TIGR02354        20 EQATVAICG-LGGLGSNVAINLARAGIGKLILVDFD   54 (200)
T ss_pred             hCCcEEEEC-cCHHHHHHHHHHHHcCCCEEEEECCC
Confidence            346899999 58899999999999998 79999988

Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.

>PRK07679 pyrroline-5-carboxylate reductase; Reviewed

Probab=96.59  E-value=0.0041  Score=54.45  Aligned_cols=68  Identities=19%  Similarity=0.217  Sum_probs=47.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCC----CeEEEEecCCch-hhccCCCCCCccCCCeeecCCcchhhhcCCCcEEEEC
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADN----HQVRVLTRSRSK-AELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNL  123 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g----~~V~~~~r~~~~-~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~  123 (355)
                      +.|+|.++| +|.+|.++++.|++.|    ++|++.+|+... ...+...      .++...  ++..++++++|+||.+
T Consensus         2 ~~mkI~~IG-~G~mG~aia~~l~~~g~~~~~~v~v~~r~~~~~~~~l~~~------~g~~~~--~~~~e~~~~aDvVila   72 (279)
T PRK07679          2 SIQNISFLG-AGSIAEAIIGGLLHANVVKGEQITVSNRSNETRLQELHQK------YGVKGT--HNKKELLTDANILFLA   72 (279)
T ss_pred             CCCEEEEEC-ccHHHHHHHHHHHHCCCCCcceEEEECCCCHHHHHHHHHh------cCceEe--CCHHHHHhcCCEEEEE
Confidence            347999999 8999999999999987    889999987643 2332221      012222  2344556789999988


Q ss_pred             CC
Q 018503          124 AG  125 (355)
Q Consensus       124 a~  125 (355)
                      .-
T Consensus        73 v~   74 (279)
T PRK07679         73 MK   74 (279)
T ss_pred             eC
Confidence            63

>PRK06130 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=96.58  E-value=0.0098  Score=52.97  Aligned_cols=74  Identities=15%  Similarity=0.155  Sum_probs=48.7

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCC-----C--CCccCC--C-eeecCCcchhhhcCCCcEE
Q 018503           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-----K--KTRFFP--G-VMIAEEPQWRDCIQGSTAV  120 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-----~--~~~~~~--~-~d~~~~~~~~~~~~~~d~v  120 (355)
                      ++|.|+| +|.+|..++..|++.|++|++++++.+........     .  ......  . ..+.-.++..++++++|+|
T Consensus         5 ~~I~vIG-aG~mG~~iA~~l~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~aDlV   83 (311)
T PRK06130          5 QNLAIIG-AGTMGSGIAALFARKGLQVVLIDVMEGALERARGVIERALGVYAPLGIASAGMGRIRMEAGLAAAVSGADLV   83 (311)
T ss_pred             cEEEEEC-CCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHHHHHhhhcccHHHHhhceEEeCCHHHHhccCCEE
Confidence            6899998 69999999999999999999999987654432210     0  000000  0 0011123455667889999


Q ss_pred             EECCC
Q 018503          121 VNLAG  125 (355)
Q Consensus       121 i~~a~  125 (355)
                      |-+..
T Consensus        84 i~av~   88 (311)
T PRK06130         84 IEAVP   88 (311)
T ss_pred             EEecc
Confidence            98863

>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA

Probab=96.57  E-value=0.021  Score=48.35  Aligned_cols=34  Identities=21%  Similarity=0.282  Sum_probs=28.9

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCC-eEEEEecCC
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSR   84 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~   84 (355)
                      ..+|+|.| .|-+|+++++.|...|. +++.++.+.
T Consensus        21 ~~~VlivG-~GglGs~va~~La~~Gvg~i~lvD~D~   55 (228)
T cd00757          21 NARVLVVG-AGGLGSPAAEYLAAAGVGKLGLVDDDV   55 (228)
T ss_pred             CCcEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCE
Confidence            46899999 89999999999999995 777776653

Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).

>TIGR00507 aroE shikimate 5-dehydrogenase

Probab=96.55  E-value=0.004  Score=54.17  Aligned_cols=72  Identities=18%  Similarity=0.180  Sum_probs=48.2

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcCCCcEEEECCCC
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT  126 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~  126 (355)
                      .++++|+|+ |.+|++++..|.+.|++|++++|+.++...+......  .......+.+.  ....++|+||++.+.
T Consensus       117 ~k~vliiGa-Gg~g~aia~~L~~~g~~v~v~~R~~~~~~~la~~~~~--~~~~~~~~~~~--~~~~~~DivInatp~  188 (270)
T TIGR00507       117 NQRVLIIGA-GGAARAVALPLLKADCNVIIANRTVSKAEELAERFQR--YGEIQAFSMDE--LPLHRVDLIINATSA  188 (270)
T ss_pred             CCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhh--cCceEEechhh--hcccCccEEEECCCC
Confidence            468999996 8999999999999999999999987665443322100  00011111111  123578999999875

This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.

>PRK08229 2-dehydropantoate 2-reductase; Provisional

Probab=96.53  E-value=0.005  Score=55.62  Aligned_cols=35  Identities=34%  Similarity=0.454  Sum_probs=32.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCC
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSR   84 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~   84 (355)
                      |+|+|.|+| +|.+|..++..|.+.||+|++++|+.
T Consensus         1 ~~mkI~IiG-~G~mG~~~A~~L~~~G~~V~~~~r~~   35 (341)
T PRK08229          1 MMARICVLG-AGSIGCYLGGRLAAAGADVTLIGRAR   35 (341)
T ss_pred             CCceEEEEC-CCHHHHHHHHHHHhcCCcEEEEecHH
Confidence            347999998 89999999999999999999999965

>TIGR01505 tartro_sem_red 2-hydroxy-3-oxopropionate reductase

Probab=96.51  E-value=0.0035  Score=55.29  Aligned_cols=64  Identities=16%  Similarity=0.236  Sum_probs=48.4

Q ss_pred             EEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcCCCcEEEECCC
Q 018503           52 TVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG  125 (355)
Q Consensus        52 ~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~  125 (355)
                      +|.|+| .|.+|..++..|++.|++|++.+|+++....+....         ....++..++++++|+||-+..
T Consensus         1 ~IgvIG-~G~mG~~iA~~l~~~G~~V~~~dr~~~~~~~~~~~g---------~~~~~~~~~~~~~aDivi~~vp   64 (291)
T TIGR01505         1 KVGFIG-LGIMGSPMSINLAKAGYQLHVTTIGPEVADELLAAG---------AVTAETARQVTEQADVIFTMVP   64 (291)
T ss_pred             CEEEEE-ecHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCC---------CcccCCHHHHHhcCCEEEEecC
Confidence            478898 799999999999999999999999987655443321         1122345567788999998864

This model represents 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60), also called tartronate semialdehyde reductase. It follows glyoxylate carboligase and precedes glycerate kinase in D-glycerate pathway of glyoxylate degradation. The eventual product, 3-phosphoglycerate, is an intermediate of glycolysis and is readily metabolized. Tartronic semialdehyde, the substrate of this enzyme, may also come from other pathways, such as D-glucarate catabolism.

>PRK12490 6-phosphogluconate dehydrogenase-like protein; Reviewed

Probab=96.50  E-value=0.012  Score=51.99  Aligned_cols=65  Identities=14%  Similarity=0.247  Sum_probs=45.9

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcCC---CcEEEECCC
Q 018503           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQG---STAVVNLAG  125 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~---~d~vi~~a~  125 (355)
                      |+|.|+| .|.+|.++++.|++.|++|++.+|++++...+....       +..  .++..+++++   +|+||-+..
T Consensus         1 m~Ig~IG-lG~mG~~mA~~L~~~g~~v~v~dr~~~~~~~~~~~g-------~~~--~~s~~~~~~~~~~advVi~~vp   68 (299)
T PRK12490          1 MKLGLIG-LGKMGGNMAERLREDGHEVVGYDVNQEAVDVAGKLG-------ITA--RHSLEELVSKLEAPRTIWVMVP   68 (299)
T ss_pred             CEEEEEc-ccHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHCC-------Cee--cCCHHHHHHhCCCCCEEEEEec
Confidence            5799998 899999999999999999999999877655443211       111  2233444433   688887753

>PRK09260 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=96.49  E-value=0.0039  Score=54.86  Aligned_cols=74  Identities=12%  Similarity=0.193  Sum_probs=49.9

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCC-------CCCc-cCCCe-------eecCCcchhhhcC
Q 018503           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-------KKTR-FFPGV-------MIAEEPQWRDCIQ  115 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-------~~~~-~~~~~-------d~~~~~~~~~~~~  115 (355)
                      ++|.|+| .|.+|..++..|++.|++|++++++++........       ..+. .....       .+.-.+++.+.++
T Consensus         2 ~~V~VIG-~G~mG~~iA~~la~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~   80 (288)
T PRK09260          2 EKLVVVG-AGVMGRGIAYVFAVSGFQTTLVDIKQEQLESAQQEIASIFEQGVARGKLTEAARQAALARLSYSLDLKAAVA   80 (288)
T ss_pred             cEEEEEC-ccHHHHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhCeEEeCcHHHhhc
Confidence            4799999 59999999999999999999999987765432210       0000 00000       0112345667788


Q ss_pred             CCcEEEECCC
Q 018503          116 GSTAVVNLAG  125 (355)
Q Consensus       116 ~~d~vi~~a~  125 (355)
                      ++|+||-|..
T Consensus        81 ~aD~Vi~avp   90 (288)
T PRK09260         81 DADLVIEAVP   90 (288)
T ss_pred             CCCEEEEecc
Confidence            9999998864

>PRK07530 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=96.48  E-value=0.016  Score=51.09  Aligned_cols=39  Identities=21%  Similarity=0.235  Sum_probs=34.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhh
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAE   88 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~   88 (355)
                      +.++|.|+| +|.+|..++..|+..|++|++++++++...
T Consensus         3 ~~~kI~vIG-aG~mG~~iA~~la~~G~~V~l~d~~~~~~~   41 (292)
T PRK07530          3 AIKKVGVIG-AGQMGNGIAHVCALAGYDVLLNDVSADRLE   41 (292)
T ss_pred             CCCEEEEEC-CcHHHHHHHHHHHHCCCeEEEEeCCHHHHH
Confidence            346899999 699999999999999999999999876543

>PRK05600 thiamine biosynthesis protein ThiF; Validated

Probab=96.47  E-value=0.014  Score=52.98  Aligned_cols=35  Identities=20%  Similarity=0.306  Sum_probs=30.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCC-eEEEEecCC
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSR   84 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~   84 (355)
                      ...+|+|+| .|.+|.++++.|...|. +++.++.+.
T Consensus        40 ~~~~VliiG-~GglG~~v~~~La~~Gvg~i~ivD~D~   75 (370)
T PRK05600         40 HNARVLVIG-AGGLGCPAMQSLASAGVGTITLIDDDT   75 (370)
T ss_pred             cCCcEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCCE
Confidence            345899999 79999999999999995 888888763

>TIGR00518 alaDH alanine dehydrogenase

Probab=96.46  E-value=0.0058  Score=55.65  Aligned_cols=74  Identities=9%  Similarity=0.068  Sum_probs=53.5

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcCCCcEEEECCCC
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT  126 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~  126 (355)
                      ..+|+|+|+ |-+|...++.|...|.+|++++|++.+.........  .....+..+.+.+.+.++++|+||++++.
T Consensus       167 ~~~VlViGa-G~vG~~aa~~a~~lGa~V~v~d~~~~~~~~l~~~~g--~~v~~~~~~~~~l~~~l~~aDvVI~a~~~  240 (370)
T TIGR00518       167 PGDVTIIGG-GVVGTNAAKMANGLGATVTILDINIDRLRQLDAEFG--GRIHTRYSNAYEIEDAVKRADLLIGAVLI  240 (370)
T ss_pred             CceEEEEcC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHhcC--ceeEeccCCHHHHHHHHccCCEEEEcccc
Confidence            357999985 999999999999999999999998765443322110  01112334556778888899999999854

The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.

>cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like

Probab=96.45  E-value=0.028  Score=46.39  Aligned_cols=34  Identities=15%  Similarity=0.306  Sum_probs=28.5

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCC-eEEEEecCC
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSR   84 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~   84 (355)
                      ..+|+|.|..| +|.++++.|...|. +++.++.+.
T Consensus        19 ~s~VlviG~gg-lGsevak~L~~~GVg~i~lvD~d~   53 (198)
T cd01485          19 SAKVLIIGAGA-LGAEIAKNLVLAGIDSITIVDHRL   53 (198)
T ss_pred             hCcEEEECCCH-HHHHHHHHHHHcCCCEEEEEECCc
Confidence            35899999655 99999999999994 688888764

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol

>PRK06718 precorrin-2 dehydrogenase; Reviewed

Probab=96.45  E-value=0.011  Score=49.02  Aligned_cols=70  Identities=13%  Similarity=0.102  Sum_probs=46.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchh-hccCCCCCCccCCCeeecCCcchhhhcCCCcEEEECCC
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKA-ELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG  125 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~  125 (355)
                      ..++|+|+|| |-+|...++.|++.|++|+++++..... ..+...      ..+.+.........+.++|.||-+.+
T Consensus         9 ~~k~vLVIGg-G~va~~ka~~Ll~~ga~V~VIs~~~~~~l~~l~~~------~~i~~~~~~~~~~~l~~adlViaaT~   79 (202)
T PRK06718          9 SNKRVVIVGG-GKVAGRRAITLLKYGAHIVVISPELTENLVKLVEE------GKIRWKQKEFEPSDIVDAFLVIAATN   79 (202)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEcCCCCHHHHHHHhC------CCEEEEecCCChhhcCCceEEEEcCC
Confidence            3479999995 9999999999999999999998754322 121111      11333333233345678998887754

>PRK07634 pyrroline-5-carboxylate reductase; Reviewed

Probab=96.44  E-value=0.0055  Score=52.54  Aligned_cols=69  Identities=14%  Similarity=0.291  Sum_probs=45.6

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHhCCC---e-EEEEecCC-chhhccCCCCCCccCCCeeecCCcchhhhcCCCcEEEE
Q 018503           48 ASQMTVSVTGATGFIGRRLVQRLQADNH---Q-VRVLTRSR-SKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVN  122 (355)
Q Consensus        48 ~~~~~IlVtGatG~iG~~l~~~L~~~g~---~-V~~~~r~~-~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~  122 (355)
                      |+.|||.|+| +|.+|+.++..|++.|+   + |++..|+. +....+...     + .+..  ..+..++++++|+||.
T Consensus         2 m~~~kI~iIG-~G~mg~ala~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~~-----~-~~~~--~~~~~~~~~~~DiVii   72 (245)
T PRK07634          2 LKKHRILFIG-AGRMAEAIFSGLLKTSKEYIEEIIVSNRSNVEKLDQLQAR-----Y-NVST--TTDWKQHVTSVDTIVL   72 (245)
T ss_pred             CCCCeEEEEC-cCHHHHHHHHHHHhCCCCCcCeEEEECCCCHHHHHHHHHH-----c-CcEE--eCChHHHHhcCCEEEE
Confidence            4457999999 79999999999998863   3 66777753 333332221     1 1222  2345566788999998


Q ss_pred             CCC
Q 018503          123 LAG  125 (355)
Q Consensus       123 ~a~  125 (355)
                      +..
T Consensus        73 avp   75 (245)
T PRK07634         73 AMP   75 (245)
T ss_pred             ecC
Confidence            853

>PRK06444 prephenate dehydrogenase; Provisional

Probab=96.42  E-value=0.0072  Score=49.58  Aligned_cols=28  Identities=29%  Similarity=0.387  Sum_probs=26.6

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhCCCeEE
Q 018503           51 MTVSVTGATGFIGRRLVQRLQADNHQVR   78 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~g~~V~   78 (355)
                      |+|.|+||+|.+|+.+++.|.+.||.|+
T Consensus         1 ~~~~iiG~~G~mG~~~~~~~~~~g~~v~   28 (197)
T PRK06444          1 MMEIIIGKNGRLGRVLCSILDDNGLGVY   28 (197)
T ss_pred             CEEEEEecCCcHHHHHHHHHHhCCCEEE
Confidence            6899999999999999999999999986

>PRK07819 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=96.42  E-value=0.018  Score=50.53  Aligned_cols=38  Identities=21%  Similarity=0.277  Sum_probs=34.1

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhc
Q 018503           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAEL   89 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~   89 (355)
                      .+|.|+| +|.+|..++..|+..||+|+.++++++....
T Consensus         6 ~~V~ViG-aG~mG~~iA~~~a~~G~~V~l~d~~~~~~~~   43 (286)
T PRK07819          6 QRVGVVG-AGQMGAGIAEVCARAGVDVLVFETTEELATA   43 (286)
T ss_pred             cEEEEEc-ccHHHHHHHHHHHhCCCEEEEEECCHHHHHH
Confidence            4899999 5999999999999999999999999887543

>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.42  E-value=0.012  Score=51.34  Aligned_cols=56  Identities=14%  Similarity=0.271  Sum_probs=45.3

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcCCCcEEEECCCC
Q 018503           48 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT  126 (355)
Q Consensus        48 ~~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~  126 (355)
                      ..+++|+|+|++|.+|+.++..|+++|.+|+++.|..                       ..+.+.++++|+||++.|.
T Consensus       157 l~Gk~vvViG~gg~vGkpia~~L~~~gatVtv~~~~t-----------------------~~L~~~~~~aDIvI~AtG~  212 (283)
T PRK14192        157 LAGKHAVVVGRSAILGKPMAMMLLNANATVTICHSRT-----------------------QNLPELVKQADIIVGAVGK  212 (283)
T ss_pred             CCCCEEEEECCcHHHHHHHHHHHHhCCCEEEEEeCCc-----------------------hhHHHHhccCCEEEEccCC
Confidence            3467999999999999999999999999998877621                       2344555789999999874

>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase

Probab=96.41  E-value=0.01  Score=53.58  Aligned_cols=74  Identities=22%  Similarity=0.150  Sum_probs=50.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCC-CCCCccCCCeeecCCcchh----hhc-CCCcEEEE
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP-GKKTRFFPGVMIAEEPQWR----DCI-QGSTAVVN  122 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-~~~~~~~~~~d~~~~~~~~----~~~-~~~d~vi~  122 (355)
                      ...+|+|+||+|.+|..+++.+...|.+|++++++.++...... .+.   ...++..+.+.+.    +.. .++|+|++
T Consensus       151 ~g~~VlI~Ga~G~vG~~aiqlAk~~G~~Vi~~~~~~~~~~~~~~~lGa---~~vi~~~~~~~~~~~i~~~~~~gvd~v~d  227 (338)
T cd08295         151 KGETVFVSAASGAVGQLVGQLAKLKGCYVVGSAGSDEKVDLLKNKLGF---DDAFNYKEEPDLDAALKRYFPNGIDIYFD  227 (338)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCC---ceeEEcCCcccHHHHHHHhCCCCcEEEEE
Confidence            34689999999999999999888899999999998776554433 211   1112322222332    222 37899999


Q ss_pred             CCC
Q 018503          123 LAG  125 (355)
Q Consensus       123 ~a~  125 (355)
                      +.|
T Consensus       228 ~~g  230 (338)
T cd08295         228 NVG  230 (338)
T ss_pred             CCC
Confidence            876

This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in

>PRK12491 pyrroline-5-carboxylate reductase; Reviewed

Probab=96.40  E-value=0.0042  Score=53.99  Aligned_cols=67  Identities=12%  Similarity=0.175  Sum_probs=47.6

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCC----eEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcCCCcEEEECCC
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNH----QVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG  125 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~----~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~  125 (355)
                      .|+|.++| +|.+|.+++..|++.|+    +|++.+|+.++...+...     + ++...  ++..++++++|+||-+.-
T Consensus         2 ~~~IgfIG-~G~MG~aia~~L~~~g~~~~~~I~v~~r~~~~~~~l~~~-----~-g~~~~--~~~~e~~~~aDiIiLavk   72 (272)
T PRK12491          2 NKQIGFIG-CGNMGIAMIGGMINKNIVSPDQIICSDLNVSNLKNASDK-----Y-GITIT--TNNNEVANSADILILSIK   72 (272)
T ss_pred             CCeEEEEC-ccHHHHHHHHHHHHCCCCCCceEEEECCCHHHHHHHHHh-----c-CcEEe--CCcHHHHhhCCEEEEEeC
Confidence            46899999 89999999999999874    799999887665543321     1 12222  233345678999998853

>PF02571 CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: IPR003723 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt

Probab=96.40  E-value=0.019  Score=48.96  Aligned_cols=97  Identities=21%  Similarity=0.242  Sum_probs=61.8

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcC--CCcEEEECCCCCC
Q 018503           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ--GSTAVVNLAGTPI  128 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--~~d~vi~~a~~~~  128 (355)
                      |+|||+|||+= |+.|++.|.+.|+ |++.+-.+-..................+.+.+.+.++++  +++.||....+. 
T Consensus         1 m~ILvlgGTtE-~r~la~~L~~~g~-v~~sv~t~~g~~~~~~~~~~~~v~~G~lg~~~~l~~~l~~~~i~~vIDATHPf-   77 (249)
T PF02571_consen    1 MKILVLGGTTE-GRKLAERLAEAGY-VIVSVATSYGGELLKPELPGLEVRVGRLGDEEGLAEFLRENGIDAVIDATHPF-   77 (249)
T ss_pred             CEEEEEechHH-HHHHHHHHHhcCC-EEEEEEhhhhHhhhccccCCceEEECCCCCHHHHHHHHHhCCCcEEEECCCch-
Confidence            79999999875 9999999999998 655444333322221110000011122337888888884  899999997642 


Q ss_pred             CCCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEE
Q 018503          129 GTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVL  167 (355)
Q Consensus       129 ~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~  167 (355)
                                     -...++++.++|++  .++..+-|
T Consensus        78 ---------------A~~is~na~~a~~~--~~ipylR~   99 (249)
T PF02571_consen   78 ---------------AAEISQNAIEACRE--LGIPYLRF   99 (249)
T ss_pred             ---------------HHHHHHHHHHHHhh--cCcceEEE
Confidence                           12345678899999  67764433

Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents CobK and CbiJ precorrin-6x reductase (1.3.1.54 from EC). In the aerobic pathway, CobK catalyses the reduction of the macrocycle of precorrin-6X to produce precorrin-6Y; while in the anaerobic pathway CbiJ catalyses the reduction of the macrocycle of cobalt-precorrin-6X into cobalt-precorrin-6Y [, ].; GO: 0016994 precorrin-6A reductase activity, 0009236 cobalamin biosynthetic process, 0055114 oxidation-reduction process

>PLN02256 arogenate dehydrogenase

Probab=96.37  E-value=0.0089  Score=52.79  Aligned_cols=67  Identities=18%  Similarity=0.180  Sum_probs=46.3

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhc-CCCcEEEECCC
Q 018503           48 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCI-QGSTAVVNLAG  125 (355)
Q Consensus        48 ~~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~-~~~d~vi~~a~  125 (355)
                      +.+|+|.|+| .|.+|..++..|.+.|++|++++++....... ..       ++.  ...+..+++ .++|+||.+..
T Consensus        34 ~~~~kI~IIG-~G~mG~slA~~L~~~G~~V~~~d~~~~~~~a~-~~-------gv~--~~~~~~e~~~~~aDvVilavp  101 (304)
T PLN02256         34 SRKLKIGIVG-FGNFGQFLAKTFVKQGHTVLATSRSDYSDIAA-EL-------GVS--FFRDPDDFCEEHPDVVLLCTS  101 (304)
T ss_pred             CCCCEEEEEe-eCHHHHHHHHHHHhCCCEEEEEECccHHHHHH-Hc-------CCe--eeCCHHHHhhCCCCEEEEecC
Confidence            3457999999 79999999999999999999999986321111 11       111  123344444 46899998864

>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins

Probab=96.36  E-value=0.046  Score=42.49  Aligned_cols=32  Identities=16%  Similarity=0.304  Sum_probs=27.9

Q ss_pred             EEEEEcCCchHHHHHHHHHHhCCC-eEEEEecCC
Q 018503           52 TVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSR   84 (355)
Q Consensus        52 ~IlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~   84 (355)
                      +|+|.| .|-+|+++++.|...|. +++.++.+.
T Consensus         1 ~VliiG-~GglGs~ia~~L~~~Gv~~i~ivD~d~   33 (143)
T cd01483           1 RVLLVG-LGGLGSEIALNLARSGVGKITLIDFDT   33 (143)
T ss_pred             CEEEEC-CCHHHHHHHHHHHHCCCCEEEEEcCCC
Confidence            589999 59999999999999997 788888763

This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.

>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional

Probab=96.36  E-value=0.016  Score=51.34  Aligned_cols=66  Identities=21%  Similarity=0.338  Sum_probs=51.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcCCCcEEEECCCC
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT  126 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~  126 (355)
                      ..++|.|+| .|.||+.+++.|..-|++|++.+|..+....         .  ......+++.++++++|+|+.+...
T Consensus       135 ~g~tvgIvG-~G~IG~~vA~~l~afG~~V~~~~~~~~~~~~---------~--~~~~~~~~l~e~l~~aDvvv~~lPl  200 (312)
T PRK15469        135 EDFTIGILG-AGVLGSKVAQSLQTWGFPLRCWSRSRKSWPG---------V--QSFAGREELSAFLSQTRVLINLLPN  200 (312)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCCCCCCC---------c--eeecccccHHHHHhcCCEEEECCCC
Confidence            457999999 8999999999999999999999986543110         0  1122456888999999999988753

>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase

Probab=96.35  E-value=0.0086  Score=53.65  Aligned_cols=73  Identities=16%  Similarity=0.075  Sum_probs=50.0

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhc-----CCCcEEEECC
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCI-----QGSTAVVNLA  124 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~-----~~~d~vi~~a  124 (355)
                      ..+|||+||+|.+|..+++.+...|.+|++++++.++.......+.   ..-++..+.+.+.+.+     .++|+|+.+.
T Consensus       139 g~~VLI~ga~g~vG~~aiqlAk~~G~~Vi~~~~s~~~~~~~~~lGa---~~vi~~~~~~~~~~~~~~~~~~gvdvv~d~~  215 (325)
T TIGR02825       139 GETVMVNAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKVAYLKKLGF---DVAFNYKTVKSLEETLKKASPDGYDCYFDNV  215 (325)
T ss_pred             CCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCC---CEEEeccccccHHHHHHHhCCCCeEEEEECC
Confidence            4689999999999999999888899999999998776554433221   1112332322332222     2689999987


Q ss_pred             C
Q 018503          125 G  125 (355)
Q Consensus       125 ~  125 (355)
                      |
T Consensus       216 G  216 (325)
T TIGR02825       216 G  216 (325)
T ss_pred             C
Confidence            6

Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.

>PRK13302 putative L-aspartate dehydrogenase; Provisional

Probab=96.35  E-value=0.0086  Score=52.03  Aligned_cols=70  Identities=17%  Similarity=0.227  Sum_probs=46.5

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHhC--CCeEEEE-ecCCchhhccCCCCCCccCCCeeecCCcchhhhcCCCcEEEECC
Q 018503           48 ASQMTVSVTGATGFIGRRLVQRLQAD--NHQVRVL-TRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLA  124 (355)
Q Consensus        48 ~~~~~IlVtGatG~iG~~l~~~L~~~--g~~V~~~-~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a  124 (355)
                      |+++||.|+| .|.+|+.+++.|.+.  ++++.++ +|++++.......     +....  -.+++++++.++|+|+-++
T Consensus         4 m~~irIGIIG-~G~IG~~~a~~L~~~~~~~el~aV~dr~~~~a~~~a~~-----~g~~~--~~~~~eell~~~D~Vvi~t   75 (271)
T PRK13302          4 RPELRVAIAG-LGAIGKAIAQALDRGLPGLTLSAVAVRDPQRHADFIWG-----LRRPP--PVVPLDQLATHADIVVEAA   75 (271)
T ss_pred             CCeeEEEEEC-ccHHHHHHHHHHHhcCCCeEEEEEECCCHHHHHHHHHh-----cCCCc--ccCCHHHHhcCCCEEEECC
Confidence            3457999999 899999999999873  7888754 5555444332221     11001  1234556677899999997


Q ss_pred             C
Q 018503          125 G  125 (355)
Q Consensus       125 ~  125 (355)
                      .
T Consensus        76 p   76 (271)
T PRK13302         76 P   76 (271)
T ss_pred             C
Confidence            5

>PRK07574 formate dehydrogenase; Provisional

Probab=96.35  E-value=0.011  Score=53.75  Aligned_cols=68  Identities=19%  Similarity=0.231  Sum_probs=50.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcCCCcEEEECCCC
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT  126 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~  126 (355)
                      ..|+|.|+| .|.||+.+++.|...|.+|++.+|..........         .++.-..+++++++++|+|+.+...
T Consensus       191 ~gktVGIvG-~G~IG~~vA~~l~~fG~~V~~~dr~~~~~~~~~~---------~g~~~~~~l~ell~~aDvV~l~lPl  258 (385)
T PRK07574        191 EGMTVGIVG-AGRIGLAVLRRLKPFDVKLHYTDRHRLPEEVEQE---------LGLTYHVSFDSLVSVCDVVTIHCPL  258 (385)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHhCCCEEEEECCCCCchhhHhh---------cCceecCCHHHHhhcCCEEEEcCCC
Confidence            457999999 7999999999999999999999997632211111         1222234688889999999887653

>PRK05597 molybdopterin biosynthesis protein MoeB; Validated

Probab=96.35  E-value=0.033  Score=50.48  Aligned_cols=35  Identities=17%  Similarity=0.300  Sum_probs=29.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCC-eEEEEecCC
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSR   84 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~   84 (355)
                      ...+|+|+| .|.+|+++++.|...|. +++.++.+.
T Consensus        27 ~~~~VlivG-~GGlGs~~a~~La~~Gvg~i~lvD~D~   62 (355)
T PRK05597         27 FDAKVAVIG-AGGLGSPALLYLAGAGVGHITIIDDDT   62 (355)
T ss_pred             hCCeEEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence            346899999 69999999999999995 788888764

>PLN02688 pyrroline-5-carboxylate reductase

Probab=96.33  E-value=0.006  Score=53.02  Aligned_cols=64  Identities=14%  Similarity=0.260  Sum_probs=46.9

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhCCC----eEEEE-ecCCchhhccCCCCCCccCCCeeecCCcchhhhcCCCcEEEECC
Q 018503           51 MTVSVTGATGFIGRRLVQRLQADNH----QVRVL-TRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLA  124 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~g~----~V~~~-~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a  124 (355)
                      |||.++| .|.+|..+++.|++.|+    +|++. +|++++...+...       ++...  ++..++++++|+||.+.
T Consensus         1 ~kI~~IG-~G~mG~a~a~~L~~~g~~~~~~i~v~~~r~~~~~~~~~~~-------g~~~~--~~~~e~~~~aDvVil~v   69 (266)
T PLN02688          1 FRVGFIG-AGKMAEAIARGLVASGVVPPSRISTADDSNPARRDVFQSL-------GVKTA--ASNTEVVKSSDVIILAV   69 (266)
T ss_pred             CeEEEEC-CcHHHHHHHHHHHHCCCCCcceEEEEeCCCHHHHHHHHHc-------CCEEe--CChHHHHhcCCEEEEEE
Confidence            6899999 99999999999999998    88888 7877654433221       12222  23445567899999886

>PRK08328 hypothetical protein; Provisional

Probab=96.32  E-value=0.039  Score=46.74  Aligned_cols=34  Identities=21%  Similarity=0.346  Sum_probs=29.0

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCC-eEEEEecCC
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSR   84 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~   84 (355)
                      ..+|+|.| .|.+|+++++.|...|. +++.++.+.
T Consensus        27 ~~~VlIiG-~GGlGs~ia~~La~~Gvg~i~lvD~D~   61 (231)
T PRK08328         27 KAKVAVVG-VGGLGSPVAYYLAAAGVGRILLIDEQT   61 (231)
T ss_pred             CCcEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCc
Confidence            45899999 79999999999999995 788887654

>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional

Probab=96.32  E-value=0.028  Score=48.06  Aligned_cols=34  Identities=24%  Similarity=0.220  Sum_probs=29.0

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCC-eEEEEecCC
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSR   84 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~   84 (355)
                      ..+|+|+|+ |.+|+++++.|...|. ++++++.+.
T Consensus        32 ~~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~D~   66 (245)
T PRK05690         32 AARVLVVGL-GGLGCAASQYLAAAGVGTLTLVDFDT   66 (245)
T ss_pred             CCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCE
Confidence            468999995 9999999999999995 788877753

>PRK12480 D-lactate dehydrogenase; Provisional

Probab=96.31  E-value=0.013  Score=52.45  Aligned_cols=63  Identities=17%  Similarity=0.200  Sum_probs=48.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcCCCcEEEECCC
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG  125 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~  125 (355)
                      ..|+|.|+| .|.+|+.+++.|...|++|++.+|+......         .  ..  -.+++.++++++|+|+.+..
T Consensus       145 ~g~~VgIIG-~G~IG~~vA~~L~~~G~~V~~~d~~~~~~~~---------~--~~--~~~~l~ell~~aDiVil~lP  207 (330)
T PRK12480        145 KNMTVAIIG-TGRIGAATAKIYAGFGATITAYDAYPNKDLD---------F--LT--YKDSVKEAIKDADIISLHVP  207 (330)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHhCCCEEEEEeCChhHhhh---------h--hh--ccCCHHHHHhcCCEEEEeCC
Confidence            457999999 7999999999999999999999998643211         0  11  12467788899999887764

>TIGR01851 argC_other N-acetyl-gamma-glutamyl-phosphate reductase, uncommon form

Probab=96.31  E-value=0.014  Score=51.15  Aligned_cols=56  Identities=13%  Similarity=0.198  Sum_probs=40.6

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhCC-CeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcCCCcEEEECCC
Q 018503           51 MTVSVTGATGFIGRRLVQRLQADN-HQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG  125 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~  125 (355)
                      -||.|.|||||.|..|++.|..+. .++..++....                ++   +.+..++++++|+||.+..
T Consensus         2 ~~v~IvGasGy~G~el~rlL~~HP~~el~~l~s~~~----------------~~---~~~~~~~~~~~D~vFlalp   58 (310)
T TIGR01851         2 PKVFIDGEAGTTGLQIRERLSGRDDIELLSIAPDRR----------------KD---AAERAKLLNAADVAILCLP   58 (310)
T ss_pred             CeEEEECCCChhHHHHHHHHhCCCCeEEEEEecccc----------------cC---cCCHhHhhcCCCEEEECCC
Confidence            379999999999999999999985 57776654322                11   1123455678999998874

This model represents the less common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and gap architecture in a multiple sequence alignment.

>PRK09599 6-phosphogluconate dehydrogenase-like protein; Reviewed

Probab=96.31  E-value=0.0076  Score=53.39  Aligned_cols=39  Identities=26%  Similarity=0.442  Sum_probs=34.9

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhcc
Q 018503           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELI   90 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~   90 (355)
                      |+|.|+| .|.+|+.+++.|++.|++|++.+|++++...+
T Consensus         1 m~Ig~IG-lG~MG~~mA~~L~~~g~~v~v~dr~~~~~~~~   39 (301)
T PRK09599          1 MQLGMIG-LGRMGGNMARRLLRGGHEVVGYDRNPEAVEAL   39 (301)
T ss_pred             CEEEEEc-ccHHHHHHHHHHHHCCCeEEEEECCHHHHHHH
Confidence            5899998 89999999999999999999999998766554

>PRK08818 prephenate dehydrogenase; Provisional

Probab=96.31  E-value=0.015  Score=52.62  Aligned_cols=56  Identities=20%  Similarity=0.183  Sum_probs=43.1

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhC-CCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcCCCcEEEECCC
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQAD-NHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG  125 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~  125 (355)
                      .++|.|+|.+|.+|..+++.|.+. +++|+++++..+.                    .....+.++++|+||-|..
T Consensus         4 ~~~I~IIGl~GliGgslA~alk~~~~~~V~g~D~~d~~--------------------~~~~~~~v~~aDlVilavP   60 (370)
T PRK08818          4 QPVVGIVGSAGAYGRWLARFLRTRMQLEVIGHDPADPG--------------------SLDPATLLQRADVLIFSAP   60 (370)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhcCCCEEEEEcCCccc--------------------cCCHHHHhcCCCEEEEeCC
Confidence            469999999999999999999975 8999999874110                    1123455678899988864

>PRK06522 2-dehydropantoate 2-reductase; Reviewed

Probab=96.29  E-value=0.0098  Score=52.73  Aligned_cols=38  Identities=24%  Similarity=0.446  Sum_probs=33.2

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhc
Q 018503           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAEL   89 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~   89 (355)
                      |+|+|+| +|.+|..++..|.+.|++|+.++|+.+....
T Consensus         1 m~I~IiG-~G~~G~~~a~~L~~~g~~V~~~~r~~~~~~~   38 (304)
T PRK06522          1 MKIAILG-AGAIGGLFGAALAQAGHDVTLVARRGAHLDA   38 (304)
T ss_pred             CEEEEEC-CCHHHHHHHHHHHhCCCeEEEEECChHHHHH
Confidence            6899999 5999999999999999999999997655443

>COG2099 CobK Precorrin-6x reductase [Coenzyme metabolism]

Probab=96.29  E-value=0.032  Score=46.83  Aligned_cols=96  Identities=15%  Similarity=0.112  Sum_probs=64.1

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcC--CCcEEEECCCCC
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ--GSTAVVNLAGTP  127 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--~~d~vi~~a~~~  127 (355)
                      +|+|+|+|||+= ++.|++.|...+..+++.+-.........+...   .......+.+.+.++++  ++|.+|......
T Consensus         2 ~~~ilvlGGT~D-ar~la~~L~~~~~~~~~ss~t~~g~~l~~~~~~---~~~~G~l~~e~l~~~l~e~~i~llIDATHPy   77 (257)
T COG2099           2 MMRILLLGGTSD-ARALAKKLAAAPVDIILSSLTGYGAKLAEQIGP---VRVGGFLGAEGLAAFLREEGIDLLIDATHPY   77 (257)
T ss_pred             CceEEEEeccHH-HHHHHHHhhccCccEEEEEcccccccchhccCC---eeecCcCCHHHHHHHHHHcCCCEEEECCChH
Confidence            478999999986 899999999988555554443333222222211   22245568888888885  799999886531


Q ss_pred             CCCCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEE
Q 018503          128 IGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVL  167 (355)
Q Consensus       128 ~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~  167 (355)
                                      -...+.|.+++|++  .++..+.|
T Consensus        78 ----------------Aa~iS~Na~~aake--~gipy~r~   99 (257)
T COG2099          78 ----------------AARISQNAARAAKE--TGIPYLRL   99 (257)
T ss_pred             ----------------HHHHHHHHHHHHHH--hCCcEEEE
Confidence                            13356688999999  78865544

>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type

Probab=96.26  E-value=0.0089  Score=52.33  Aligned_cols=74  Identities=14%  Similarity=0.087  Sum_probs=51.2

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCC-eEEEEecCCchhhccCCCCCCccCCCee-ecCCcchhhhcCCCcEEEECCCC
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRSKAELIFPGKKTRFFPGVM-IAEEPQWRDCIQGSTAVVNLAGT  126 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~d-~~~~~~~~~~~~~~d~vi~~a~~  126 (355)
                      .++++|+| +|..|++++..|.+.|. +|+++.|+.++...+......  ...+. +...+++...+.++|+||++...
T Consensus       125 ~k~vlvlG-aGGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~~--~~~~~~~~~~~~~~~~~~~~DiVInaTp~  200 (282)
T TIGR01809       125 GFRGLVIG-AGGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGVQ--VGVITRLEGDSGGLAIEKAAEVLVSTVPA  200 (282)
T ss_pred             CceEEEEc-CcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhhh--cCcceeccchhhhhhcccCCCEEEECCCC
Confidence            46899999 69999999999999996 799999998777655432110  00111 11113344556789999999765

This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.

>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family

Probab=96.25  E-value=0.009  Score=53.52  Aligned_cols=71  Identities=27%  Similarity=0.336  Sum_probs=49.2

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhc---CCCcEEEECCCC
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCI---QGSTAVVNLAGT  126 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~---~~~d~vi~~a~~  126 (355)
                      ..+++|+||+|.+|..+++.+...|.+|++++++++..........      -++.+.+.+.+.+   .++|+|+++++.
T Consensus       163 ~~~vlI~ga~g~vG~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~d~v~~~~g~  236 (332)
T cd08259         163 GDTVLVTGAGGGVGIHAIQLAKALGARVIAVTRSPEKLKILKELGA------DYVIDGSKFSEDVKKLGGADVVIELVGS  236 (332)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHcCC------cEEEecHHHHHHHHhccCCCEEEECCCh
Confidence            4589999999999999999999999999999988765444322110      1222222122222   378999999873

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.

>PRK13304 L-aspartate dehydrogenase; Reviewed

Probab=96.24  E-value=0.022  Score=49.39  Aligned_cols=66  Identities=17%  Similarity=0.210  Sum_probs=44.2

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhC--CCeEEE-EecCCchhhccCCCCCCccCCCeeecCCcchhhhcCCCcEEEECCC
Q 018503           51 MTVSVTGATGFIGRRLVQRLQAD--NHQVRV-LTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG  125 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~--g~~V~~-~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~  125 (355)
                      |||.|+| .|.+|+.+++.|.+.  ++++.+ ++|+.+....+...     +   +..-.+++++++.++|+|+.|+.
T Consensus         2 mrIgIIG-~G~iG~~ia~~l~~~~~~~elv~v~d~~~~~a~~~a~~-----~---~~~~~~~~~ell~~~DvVvi~a~   70 (265)
T PRK13304          2 LKIGIVG-CGAIASLITKAILSGRINAELYAFYDRNLEKAENLASK-----T---GAKACLSIDELVEDVDLVVECAS   70 (265)
T ss_pred             CEEEEEC-ccHHHHHHHHHHHcCCCCeEEEEEECCCHHHHHHHHHh-----c---CCeeECCHHHHhcCCCEEEEcCC
Confidence            7999999 799999999999886  466554 55555444332221     1   11112355666678999999975

>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.22  E-value=0.02  Score=49.72  Aligned_cols=56  Identities=18%  Similarity=0.346  Sum_probs=47.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcCCCcEEEECCCCC
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTP  127 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~~  127 (355)
                      .+++|+|+|.++.+|+.++..|.++|.+|+++.+..                       ..+.+.++++|+||.+.|.+
T Consensus       157 ~Gk~vvVIGrs~~VG~pla~lL~~~gatVtv~~s~t-----------------------~~l~~~~~~ADIVIsAvg~p  212 (286)
T PRK14175        157 EGKNAVVIGRSHIVGQPVSKLLLQKNASVTILHSRS-----------------------KDMASYLKDADVIVSAVGKP  212 (286)
T ss_pred             CCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCc-----------------------hhHHHHHhhCCEEEECCCCC
Confidence            467999999999999999999999999999887632                       24566778899999998864

>TIGR00036 dapB dihydrodipicolinate reductase

Probab=96.22  E-value=0.043  Score=47.57  Aligned_cols=32  Identities=31%  Similarity=0.456  Sum_probs=28.2

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhC-CCeEEEEec
Q 018503           51 MTVSVTGATGFIGRRLVQRLQAD-NHQVRVLTR   82 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~-g~~V~~~~r   82 (355)
                      |||.|+|++|.+|+.+++.+.+. +.++.++..
T Consensus         2 ikV~IiGa~G~MG~~i~~~i~~~~~~elvav~d   34 (266)
T TIGR00036         2 IKVAVAGAAGRMGRELIKAALAAEGLQLVAAFE   34 (266)
T ss_pred             eEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEe
Confidence            69999999999999999999874 788888654

>PF13380 CoA_binding_2: CoA binding domain; PDB: 3FF4_A 2D5A_A 2D59_A 2E6U_X 1IUL_A 1IUK_A 1Y81_A 2DUW_A

Probab=96.22  E-value=0.029  Score=41.83  Aligned_cols=85  Identities=20%  Similarity=0.228  Sum_probs=50.0

Q ss_pred             CEEEEEcCC---chHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcCCCcEEEECCCCC
Q 018503           51 MTVSVTGAT---GFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTP  127 (355)
Q Consensus        51 ~~IlVtGat---G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~~  127 (355)
                      ++|+|+|+|   +..|..+++.|.+.|++|+.+.-....            ..  ...-..++.+.-..+|.++.+... 
T Consensus         1 ksiAVvGaS~~~~~~g~~v~~~l~~~G~~v~~Vnp~~~~------------i~--G~~~y~sl~e~p~~iDlavv~~~~-   65 (116)
T PF13380_consen    1 KSIAVVGASDNPGKFGYRVLRNLKAAGYEVYPVNPKGGE------------IL--GIKCYPSLAEIPEPIDLAVVCVPP-   65 (116)
T ss_dssp             -EEEEET--SSTTSHHHHHHHHHHHTT-EEEEESTTCSE------------ET--TEE-BSSGGGCSST-SEEEE-S-H-
T ss_pred             CEEEEEcccCCCCChHHHHHHHHHhCCCEEEEECCCceE------------EC--cEEeeccccCCCCCCCEEEEEcCH-
Confidence            479999998   779999999999999999988544322            11  111233444434678998887531 


Q ss_pred             CCCCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEee
Q 018503          128 IGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSA  170 (355)
Q Consensus       128 ~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss  170 (355)
                                        ..+..+++.|.+  .+++.+++.++
T Consensus        66 ------------------~~~~~~v~~~~~--~g~~~v~~~~g   88 (116)
T PF13380_consen   66 ------------------DKVPEIVDEAAA--LGVKAVWLQPG   88 (116)
T ss_dssp             ------------------HHHHHHHHHHHH--HT-SEEEE-TT
T ss_pred             ------------------HHHHHHHHHHHH--cCCCEEEEEcc
Confidence                              122255666666  58888888765

>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.20  E-value=0.016  Score=50.57  Aligned_cols=56  Identities=18%  Similarity=0.299  Sum_probs=46.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcCCCcEEEECCCCC
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTP  127 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~~  127 (355)
                      .+++|.|+|.+|.+|+.++..|+++|++|++..|...                       ++.++.+++|+||-+.|.+
T Consensus       158 ~Gk~V~vIG~s~ivG~PmA~~L~~~gatVtv~~~~t~-----------------------~l~e~~~~ADIVIsavg~~  213 (301)
T PRK14194        158 TGKHAVVIGRSNIVGKPMAALLLQAHCSVTVVHSRST-----------------------DAKALCRQADIVVAAVGRP  213 (301)
T ss_pred             CCCEEEEECCCCccHHHHHHHHHHCCCEEEEECCCCC-----------------------CHHHHHhcCCEEEEecCCh
Confidence            4689999999999999999999999999999866431                       4556677899999988753

>COG2084 MmsB 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases [Lipid metabolism]

Probab=96.20  E-value=0.0082  Score=51.99  Aligned_cols=65  Identities=18%  Similarity=0.307  Sum_probs=49.5

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhc-cCCCCCCccCCCeeecCCcchhhhcCCCcEEEECCC
Q 018503           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAEL-IFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG  125 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~  125 (355)
                      |||.++| .|-.|..++..|++.||+|++.+|++++... ....+       ..  -.++..++.+++|+||-|..
T Consensus         1 ~kIafIG-LG~MG~pmA~~L~~aG~~v~v~~r~~~ka~~~~~~~G-------a~--~a~s~~eaa~~aDvVitmv~   66 (286)
T COG2084           1 MKIAFIG-LGIMGSPMAANLLKAGHEVTVYNRTPEKAAELLAAAG-------AT--VAASPAEAAAEADVVITMLP   66 (286)
T ss_pred             CeEEEEc-CchhhHHHHHHHHHCCCEEEEEeCChhhhhHHHHHcC-------Cc--ccCCHHHHHHhCCEEEEecC
Confidence            4799999 9999999999999999999999999988433 22211       11  23344667778999998865

>PLN02775 Probable dihydrodipicolinate reductase

Probab=96.20  E-value=0.088  Score=45.53  Aligned_cols=76  Identities=13%  Similarity=0.104  Sum_probs=47.9

Q ss_pred             ccCCCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccC-CCCCCccCCCeeecCCcchhhhc-----CCCc-
Q 018503           46 QKASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIF-PGKKTRFFPGVMIAEEPQWRDCI-----QGST-  118 (355)
Q Consensus        46 ~~~~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~d~~~~~~~~~~~-----~~~d-  118 (355)
                      .+.+.++|+|.|++|..|+.+++.+.+.+.++.+..-......... ...    -..+.+..++++.+.+     +.+| 
T Consensus         7 ~~~~~i~V~V~Ga~G~MG~~~~~av~~~~~~Lv~~~~~~~~~~~~~~~~~----g~~v~~~~~~dl~~~l~~~~~~~~~~   82 (286)
T PLN02775          7 PPGSAIPIMVNGCTGKMGHAVAEAAVSAGLQLVPVSFTGPAGVGVTVEVC----GVEVRLVGPSEREAVLSSVKAEYPNL   82 (286)
T ss_pred             CcCCCCeEEEECCCChHHHHHHHHHhcCCCEEEEEeccccccccccceec----cceeeeecCccHHHHHHHhhccCCCE
Confidence            3344579999999999999999999998888887433222211111 110    0134444456666655     2478 


Q ss_pred             EEEECCC
Q 018503          119 AVVNLAG  125 (355)
Q Consensus       119 ~vi~~a~  125 (355)
                      ++|.+..
T Consensus        83 VvIDFT~   89 (286)
T PLN02775         83 IVVDYTL   89 (286)
T ss_pred             EEEECCC
Confidence            8887753

>COG0287 TyrA Prephenate dehydrogenase [Amino acid transport and metabolism]

Probab=96.19  E-value=0.016  Score=50.35  Aligned_cols=68  Identities=24%  Similarity=0.344  Sum_probs=47.4

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCC---cchhhhcCCCcEEEECCC
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEE---PQWRDCIQGSTAVVNLAG  125 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~---~~~~~~~~~~d~vi~~a~  125 (355)
                      .|+|+|.| .|.+|+.+++.|.+.|+.|.++.++.+........       ..++.|.   +.......++|+||.+..
T Consensus         3 ~~~v~IvG-~GliG~s~a~~l~~~g~~v~i~g~d~~~~~~~~a~-------~lgv~d~~~~~~~~~~~~~aD~VivavP   73 (279)
T COG0287           3 SMKVGIVG-LGLMGGSLARALKEAGLVVRIIGRDRSAATLKAAL-------ELGVIDELTVAGLAEAAAEADLVIVAVP   73 (279)
T ss_pred             CcEEEEEC-CchHHHHHHHHHHHcCCeEEEEeecCcHHHHHHHh-------hcCcccccccchhhhhcccCCEEEEecc
Confidence            46788877 99999999999999999998888877654322211       1344443   222455567899998864

>PRK15116 sulfur acceptor protein CsdL; Provisional

Probab=96.17  E-value=0.2  Score=43.20  Aligned_cols=34  Identities=15%  Similarity=0.294  Sum_probs=29.4

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCC-CeEEEEecCC
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADN-HQVRVLTRSR   84 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~   84 (355)
                      ..+|+|+| .|.+|+++++.|.+.| -+++.++.+.
T Consensus        30 ~s~VlVvG-~GGVGs~vae~Lar~GVg~itLiD~D~   64 (268)
T PRK15116         30 DAHICVVG-IGGVGSWAAEALARTGIGAITLIDMDD   64 (268)
T ss_pred             CCCEEEEC-cCHHHHHHHHHHHHcCCCEEEEEeCCE
Confidence            45899999 7999999999999999 5788888753

>PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional

Probab=96.16  E-value=0.017  Score=53.85  Aligned_cols=73  Identities=12%  Similarity=0.123  Sum_probs=49.7

Q ss_pred             CCCCEEEEEcC----------------CchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchh
Q 018503           48 ASQMTVSVTGA----------------TGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWR  111 (355)
Q Consensus        48 ~~~~~IlVtGa----------------tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~  111 (355)
                      ..+++||||+|                ||..|.+|++.+..+|++|+.+.-...- .  .+..    ...+.+...+++.
T Consensus       254 l~gkkvLITaGpT~E~IDpVR~ItN~SSGkmG~alA~aa~~~GA~VtlI~Gp~~~-~--~p~~----v~~i~V~ta~eM~  326 (475)
T PRK13982        254 LAGRRVLITAGPTHEPIDPVRYIANRSSGKQGFAIAAAAAAAGAEVTLISGPVDL-A--DPQG----VKVIHVESARQML  326 (475)
T ss_pred             cCCCEEEEecCCccccCCcceeeCCCCchHHHHHHHHHHHHCCCcEEEEeCCcCC-C--CCCC----ceEEEecCHHHHH
Confidence            35679999976                7999999999999999999999854321 1  1110    1123444444544


Q ss_pred             hhcC---CCcEEEECCCCC
Q 018503          112 DCIQ---GSTAVVNLAGTP  127 (355)
Q Consensus       112 ~~~~---~~d~vi~~a~~~  127 (355)
                      +++.   ..|++|++|++.
T Consensus       327 ~av~~~~~~Di~I~aAAVa  345 (475)
T PRK13982        327 AAVEAALPADIAIFAAAVA  345 (475)
T ss_pred             HHHHhhCCCCEEEEecccc
Confidence            4442   479999999974

>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]

Probab=96.14  E-value=0.0098  Score=54.11  Aligned_cols=71  Identities=17%  Similarity=0.302  Sum_probs=60.0

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCC-CeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcCCCcEEEECCCCC
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADN-HQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTP  127 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~~  127 (355)
                      .+++||+| .|-+|.-++++|.++| .+|+++.|...+...+....      +++....+.+...+..+|+||-+.+.+
T Consensus       178 ~~~vlvIG-AGem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~------~~~~~~l~el~~~l~~~DvVissTsa~  249 (414)
T COG0373         178 DKKVLVIG-AGEMGELVAKHLAEKGVKKITIANRTLERAEELAKKL------GAEAVALEELLEALAEADVVISSTSAP  249 (414)
T ss_pred             cCeEEEEc-ccHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHh------CCeeecHHHHHHhhhhCCEEEEecCCC
Confidence            46899999 6999999999999999 79999999998887665532      256777788888899999999998764

>PRK13243 glyoxylate reductase; Reviewed

Probab=96.12  E-value=0.016  Score=51.98  Aligned_cols=66  Identities=17%  Similarity=0.156  Sum_probs=49.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcCCCcEEEECCCC
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT  126 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~  126 (355)
                      ..++|.|+| .|.||+.+++.|...|.+|++++|+......  .      ...+.   ..++.++++++|+|+.+...
T Consensus       149 ~gktvgIiG-~G~IG~~vA~~l~~~G~~V~~~d~~~~~~~~--~------~~~~~---~~~l~ell~~aDiV~l~lP~  214 (333)
T PRK13243        149 YGKTIGIIG-FGRIGQAVARRAKGFGMRILYYSRTRKPEAE--K------ELGAE---YRPLEELLRESDFVSLHVPL  214 (333)
T ss_pred             CCCEEEEEC-cCHHHHHHHHHHHHCCCEEEEECCCCChhhH--H------HcCCE---ecCHHHHHhhCCEEEEeCCC
Confidence            457999999 7999999999999999999999997643211  0      01112   23677888999999888753

>KOG1196 consensus Predicted NAD-dependent oxidoreductase [General function prediction only]

Probab=96.12  E-value=0.053  Score=46.61  Aligned_cols=99  Identities=19%  Similarity=0.160  Sum_probs=68.9

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCC-CeeecCCcchhhhc-----CCCcEEEEC
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFP-GVMIAEEPQWRDCI-----QGSTAVVNL  123 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~-~~d~~~~~~~~~~~-----~~~d~vi~~  123 (355)
                      ..+|+|.||+|-+|+-+-+...-.|..|++..-+.++...+.....   +. .+++-++..+.+++     +++|+-|.+
T Consensus       154 geTv~VSaAsGAvGql~GQ~Ak~~Gc~VVGsaGS~EKv~ll~~~~G---~d~afNYK~e~~~~~aL~r~~P~GIDiYfeN  230 (343)
T KOG1196|consen  154 GETVFVSAASGAVGQLVGQFAKLMGCYVVGSAGSKEKVDLLKTKFG---FDDAFNYKEESDLSAALKRCFPEGIDIYFEN  230 (343)
T ss_pred             CCEEEEeeccchhHHHHHHHHHhcCCEEEEecCChhhhhhhHhccC---CccceeccCccCHHHHHHHhCCCcceEEEec
Confidence            3689999999999998888777789999999999887666554422   22 35555665555555     378999999


Q ss_pred             CCCCCCCCCChhhHHHHHHHhhhhHHHHHHHHHc-CCCCCCcEEEEeeeeeeeeC
Q 018503          124 AGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINE-SPEGVRPSVLVSATALGYYG  177 (355)
Q Consensus       124 a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~-~~~~~~~~v~~Ss~~~~~yg  177 (355)
                      .|-                       +++++... + ....|+++++-.+.  |.
T Consensus       231 VGG-----------------------~~lDavl~nM-~~~gri~~CG~ISq--YN  259 (343)
T KOG1196|consen  231 VGG-----------------------KMLDAVLLNM-NLHGRIAVCGMISQ--YN  259 (343)
T ss_pred             cCc-----------------------HHHHHHHHhh-hhccceEeeeeehh--cc
Confidence            873                       23333221 2 23458999987777  65

>PRK06035 3-hydroxyacyl-CoA dehydrogenase; Validated

Probab=96.10  E-value=0.02  Score=50.51  Aligned_cols=37  Identities=19%  Similarity=0.367  Sum_probs=33.3

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhh
Q 018503           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAE   88 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~   88 (355)
                      ++|.|+| +|.+|..++..|+..|++|++++++++...
T Consensus         4 ~~I~ViG-aG~mG~~iA~~la~~G~~V~l~d~~~~~l~   40 (291)
T PRK06035          4 KVIGVVG-SGVMGQGIAQVFARTGYDVTIVDVSEEILK   40 (291)
T ss_pred             cEEEEEC-ccHHHHHHHHHHHhcCCeEEEEeCCHHHHH
Confidence            5899999 699999999999999999999999886643

>TIGR01771 L-LDH-NAD L-lactate dehydrogenase

Probab=96.09  E-value=0.042  Score=48.50  Aligned_cols=108  Identities=17%  Similarity=0.147  Sum_probs=68.7

Q ss_pred             EEcCCchHHHHHHHHHHhCCC--eEEEEecCCchhhccCCCCCC---ccCCCeeecCCcchhhhcCCCcEEEECCCCCCC
Q 018503           55 VTGATGFIGRRLVQRLQADNH--QVRVLTRSRSKAELIFPGKKT---RFFPGVMIAEEPQWRDCIQGSTAVVNLAGTPIG  129 (355)
Q Consensus        55 VtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~---~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~~~~  129 (355)
                      |+| +|.+|.+++..|+..+.  ++..++++.+...........   .....+.+.. .. .+.++++|+||.+||.+..
T Consensus         1 iIG-aG~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~i~~-~~-~~~~~daDivVitag~~rk   77 (299)
T TIGR01771         1 IIG-AGNVGSSTAFALLNQGIADEIVLIDINKDKAEGEAMDLQHAASFLPTPKKIRS-GD-YSDCKDADLVVITAGAPQK   77 (299)
T ss_pred             CCC-cCHHHHHHHHHHHhcCCCCEEEEEeCCCChhhHHHHHHHHhhcccCCCeEEec-CC-HHHHCCCCEEEECCCCCCC
Confidence            456 59999999999998874  799999876543221110000   0011233332 22 3567899999999997532


Q ss_pred             CCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEe
Q 018503          130 TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVS  169 (355)
Q Consensus       130 ~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~S  169 (355)
                      +   ..+-.+.+..|+...+.+.+.+.++ .....++.+|
T Consensus        78 ~---g~~R~dll~~N~~i~~~~~~~i~~~-~p~~~vivvs  113 (299)
T TIGR01771        78 P---GETRLELVGRNVRIMKSIVPEVVKS-GFDGIFLVAT  113 (299)
T ss_pred             C---CCCHHHHHHHHHHHHHHHHHHHHHh-CCCeEEEEeC
Confidence            2   2334688899999999999998884 2233455544

This model represents the NAD-dependent L-lactate dehydrogenases from bacteria and eukaryotes. This enzyme function as as the final step in anaerobic glycolysis. Although lactate dehydrogenases have in some cases been mistaken for malate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of malate dehydrogenases.

>PRK06719 precorrin-2 dehydrogenase; Validated

Probab=96.06  E-value=0.029  Score=44.34  Aligned_cols=33  Identities=24%  Similarity=0.290  Sum_probs=29.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEec
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTR   82 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r   82 (355)
                      .+++|+|+| .|-+|...++.|++.|++|++++.
T Consensus        12 ~~~~vlVvG-GG~va~rka~~Ll~~ga~V~VIsp   44 (157)
T PRK06719         12 HNKVVVIIG-GGKIAYRKASGLKDTGAFVTVVSP   44 (157)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHhCCCEEEEEcC
Confidence            357999999 699999999999999999999853

>PRK06249 2-dehydropantoate 2-reductase; Provisional

Probab=96.05  E-value=0.017  Score=51.42  Aligned_cols=36  Identities=28%  Similarity=0.314  Sum_probs=32.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCc
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRS   85 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~   85 (355)
                      +.|+|+|+| +|-+|..++..|.+.|++|+.+.|+..
T Consensus         4 ~~m~I~IiG-~GaiG~~lA~~L~~~g~~V~~~~r~~~   39 (313)
T PRK06249          4 ETPRIGIIG-TGAIGGFYGAMLARAGFDVHFLLRSDY   39 (313)
T ss_pred             cCcEEEEEC-CCHHHHHHHHHHHHCCCeEEEEEeCCH
Confidence            347999998 799999999999999999999999863

>PRK08223 hypothetical protein; Validated

Probab=96.04  E-value=0.074  Score=46.19  Aligned_cols=34  Identities=15%  Similarity=0.143  Sum_probs=29.0

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCC-eEEEEecCC
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSR   84 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~   84 (355)
                      ..+|+|+| .|.+|+++++.|...|. +++.++.+.
T Consensus        27 ~s~VlIvG-~GGLGs~va~~LA~aGVG~i~lvD~D~   61 (287)
T PRK08223         27 NSRVAIAG-LGGVGGIHLLTLARLGIGKFTIADFDV   61 (287)
T ss_pred             cCCEEEEC-CCHHHHHHHHHHHHhCCCeEEEEeCCC
Confidence            35899999 79999999999999995 777777754

>PRK06545 prephenate dehydrogenase; Validated

Probab=96.04  E-value=0.016  Score=52.74  Aligned_cols=67  Identities=21%  Similarity=0.255  Sum_probs=48.2

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecC--CcchhhhcCCCcEEEECCC
Q 018503           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAE--EPQWRDCIQGSTAVVNLAG  125 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~~~d~vi~~a~  125 (355)
                      ++|.|+| +|.+|..++..|.+.|++|.+++++++........       ...+.+  .+++.++++++|+||-+..
T Consensus         1 ~~I~iIG-~GliG~siA~~L~~~G~~v~i~~~~~~~~~~~~a~-------~~~~~~~~~~~~~~~~~~aDlVilavP   69 (359)
T PRK06545          1 RTVLIVG-LGLIGGSLALAIKAAGPDVFIIGYDPSAAQLARAL-------GFGVIDELAADLQRAAAEADLIVLAVP   69 (359)
T ss_pred             CeEEEEE-eCHHHHHHHHHHHhcCCCeEEEEeCCCHHHHHHHh-------cCCCCcccccCHHHHhcCCCEEEEeCC
Confidence            3689998 89999999999999999999999887654322211       111111  2355667789999998864

>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]

Probab=96.03  E-value=0.017  Score=51.14  Aligned_cols=72  Identities=25%  Similarity=0.200  Sum_probs=53.4

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcCCCcEEEECCC
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG  125 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~  125 (355)
                      ..+|+|+|+ |.+|..-++.+...|.+|++++|++++.+.....+.   -..++..|++.+.+.-+.+|++|.+++
T Consensus       167 G~~V~I~G~-GGlGh~avQ~Aka~ga~Via~~~~~~K~e~a~~lGA---d~~i~~~~~~~~~~~~~~~d~ii~tv~  238 (339)
T COG1064         167 GKWVAVVGA-GGLGHMAVQYAKAMGAEVIAITRSEEKLELAKKLGA---DHVINSSDSDALEAVKEIADAIIDTVG  238 (339)
T ss_pred             CCEEEEECC-cHHHHHHHHHHHHcCCeEEEEeCChHHHHHHHHhCC---cEEEEcCCchhhHHhHhhCcEEEECCC
Confidence            468999995 599999999999899999999999998755444322   222343455555555445999999986

>PRK08644 thiamine biosynthesis protein ThiF; Provisional

Probab=96.01  E-value=0.064  Score=44.75  Aligned_cols=33  Identities=15%  Similarity=0.360  Sum_probs=29.1

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCC-eEEEEecC
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRS   83 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~   83 (355)
                      ..+|+|.| .|.+|+.+++.|...|. +++.++.+
T Consensus        28 ~~~V~ViG-~GglGs~ia~~La~~Gvg~i~lvD~D   61 (212)
T PRK08644         28 KAKVGIAG-AGGLGSNIAVALARSGVGNLKLVDFD   61 (212)
T ss_pred             CCCEEEEC-cCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence            45899999 69999999999999996 68888887

>COG0026 PurK Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) [Nucleotide transport and metabolism]

Probab=96.00  E-value=0.016  Score=51.29  Aligned_cols=67  Identities=15%  Similarity=0.151  Sum_probs=52.0

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcCCCcEEEE
Q 018503           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVN  122 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~  122 (355)
                      |+|.|+| .|++|+-++..-...|++|++++-+++.........    ....+..|.+.+.++.+.+|+|=+
T Consensus         2 ~tvgIlG-GGQLgrMm~~aa~~lG~~v~vLdp~~~~PA~~va~~----~i~~~~dD~~al~ela~~~DViT~   68 (375)
T COG0026           2 KTVGILG-GGQLGRMMALAAARLGIKVIVLDPDADAPAAQVADR----VIVAAYDDPEALRELAAKCDVITY   68 (375)
T ss_pred             CeEEEEc-CcHHHHHHHHHHHhcCCEEEEecCCCCCchhhcccc----eeecCCCCHHHHHHHHhhCCEEEE
Confidence            6899999 699999999999999999999997776544333221    333456688899999999998843

>PLN03139 formate dehydrogenase; Provisional

Probab=96.00  E-value=0.019  Score=52.29  Aligned_cols=68  Identities=26%  Similarity=0.206  Sum_probs=49.9

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcCCCcEEEECCC
Q 018503           48 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG  125 (355)
Q Consensus        48 ~~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~  125 (355)
                      ...++|.|+| .|.||+.+++.|..-|.+|++.+|+.........         ..+.-.++++++++++|+|+.+..
T Consensus       197 L~gktVGIVG-~G~IG~~vA~~L~afG~~V~~~d~~~~~~~~~~~---------~g~~~~~~l~ell~~sDvV~l~lP  264 (386)
T PLN03139        197 LEGKTVGTVG-AGRIGRLLLQRLKPFNCNLLYHDRLKMDPELEKE---------TGAKFEEDLDAMLPKCDVVVINTP  264 (386)
T ss_pred             CCCCEEEEEe-ecHHHHHHHHHHHHCCCEEEEECCCCcchhhHhh---------cCceecCCHHHHHhhCCEEEEeCC
Confidence            3467999999 8999999999999999999999887532221111         111223478888899999987764

>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity

Probab=95.99  E-value=0.017  Score=51.76  Aligned_cols=73  Identities=18%  Similarity=0.089  Sum_probs=50.0

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcc---hhhhc-CCCcEEEECCC
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQ---WRDCI-QGSTAVVNLAG  125 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~---~~~~~-~~~d~vi~~a~  125 (355)
                      ..+|||.||+|-+|..+++.+...|.+|++++++.++...+...+.   ..-+|..+.+.   +.+.. .++|+|+.+.|
T Consensus       144 g~~vlI~ga~g~vG~~aiqlA~~~G~~vi~~~~s~~~~~~l~~~Ga---~~vi~~~~~~~~~~v~~~~~~gvd~vld~~g  220 (329)
T cd08294         144 GETVVVNGAAGAVGSLVGQIAKIKGCKVIGCAGSDDKVAWLKELGF---DAVFNYKTVSLEEALKEAAPDGIDCYFDNVG  220 (329)
T ss_pred             CCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCC---CEEEeCCCccHHHHHHHHCCCCcEEEEECCC
Confidence            4689999999999999999999999999999988876554433221   11123222222   22222 36899999876

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac

>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional

Probab=95.99  E-value=0.026  Score=52.01  Aligned_cols=66  Identities=21%  Similarity=0.189  Sum_probs=49.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcCCCcEEEECCC
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG  125 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~  125 (355)
                      ..++|+|+| .|.+|+.+++.|...|.+|+++++++.+.......       ++++.   .+.++++++|+||.+.|
T Consensus       211 ~Gk~VlViG-~G~IG~~vA~~lr~~Ga~ViV~d~dp~ra~~A~~~-------G~~v~---~l~eal~~aDVVI~aTG  276 (425)
T PRK05476        211 AGKVVVVAG-YGDVGKGCAQRLRGLGARVIVTEVDPICALQAAMD-------GFRVM---TMEEAAELGDIFVTATG  276 (425)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHhCCCEEEEEcCCchhhHHHHhc-------CCEec---CHHHHHhCCCEEEECCC
Confidence            457999999 69999999999999999999999987654322111       12322   24566779999998875

>COG1712 Predicted dinucleotide-utilizing enzyme [General function prediction only]

Probab=95.95  E-value=0.053  Score=44.63  Aligned_cols=66  Identities=23%  Similarity=0.265  Sum_probs=41.7

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhC--CC-eEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcCCCcEEEECCC
Q 018503           51 MTVSVTGATGFIGRRLVQRLQAD--NH-QVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG  125 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~--g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~  125 (355)
                      |+|.|+| +|.||..|++.+.+.  +. -+.+.+|+.++...+....        .-....++++++.++|.++-||+
T Consensus         1 l~vgiVG-cGaIG~~l~e~v~~~~~~~e~v~v~D~~~ek~~~~~~~~--------~~~~~s~ide~~~~~DlvVEaAS   69 (255)
T COG1712           1 LKVGIVG-CGAIGKFLLELVRDGRVDFELVAVYDRDEEKAKELEASV--------GRRCVSDIDELIAEVDLVVEAAS   69 (255)
T ss_pred             CeEEEEe-ccHHHHHHHHHHhcCCcceeEEEEecCCHHHHHHHHhhc--------CCCccccHHHHhhccceeeeeCC
Confidence            5799999 999999999988764  34 4666777777766443321        11112344444455666666654

>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E

Probab=95.95  E-value=0.15  Score=43.00  Aligned_cols=34  Identities=18%  Similarity=0.269  Sum_probs=29.1

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCC-eEEEEecCC
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSR   84 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~   84 (355)
                      ..+|+|+| .|.+|+++++.|...|. +++.++.+.
T Consensus        11 ~~~VlVvG-~GGvGs~va~~Lar~GVg~i~LvD~D~   45 (231)
T cd00755          11 NAHVAVVG-LGGVGSWAAEALARSGVGKLTLIDFDV   45 (231)
T ss_pred             CCCEEEEC-CCHHHHHHHHHHHHcCCCEEEEECCCE
Confidence            35899999 79999999999999995 788887654

coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>cd05211 NAD_bind_Glu_Leu_Phe_Val NAD(P) binding domain of glutamate dehydrogenase, leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

Probab=95.95  E-value=0.028  Score=46.99  Aligned_cols=37  Identities=24%  Similarity=0.426  Sum_probs=31.3

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCc
Q 018503           48 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRS   85 (355)
Q Consensus        48 ~~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~   85 (355)
                      .+.++|+|.| .|.+|+++++.|.+.|..|++++.+..
T Consensus        21 l~g~~vaIqG-fGnVG~~~a~~L~~~G~~vV~vsD~~g   57 (217)
T cd05211          21 LEGLTVAVQG-LGNVGWGLAKKLAEEGGKVLAVSDPDG   57 (217)
T ss_pred             cCCCEEEEEC-CCHHHHHHHHHHHHcCCEEEEEEcCCC
Confidence            3468999999 899999999999999998777766544

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NAD(P)+. This subfamily includes glutamate, leucine, phenylalanine, and valine DHs. Glutamate DH is a multi-domain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia assimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. As in other NAD+-dependent DHs, monomers in this family have 2 domains separated by a deep cleft. Here the c-terminal domain contains a modified NAD-binding Rossmann fold with 7 rather than the usual 6 beta strands and one strand anti-parral

>PRK07878 molybdopterin biosynthesis-like protein MoeZ; Validated

Probab=95.94  E-value=0.064  Score=49.33  Aligned_cols=35  Identities=20%  Similarity=0.223  Sum_probs=29.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCC-eEEEEecCC
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSR   84 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~   84 (355)
                      ...+|+|+| .|.+|.++++.|...|. +++.++.+.
T Consensus        41 ~~~~VlviG-~GGlGs~va~~La~~Gvg~i~lvD~D~   76 (392)
T PRK07878         41 KNARVLVIG-AGGLGSPTLLYLAAAGVGTLGIVEFDV   76 (392)
T ss_pred             hcCCEEEEC-CCHHHHHHHHHHHHcCCCeEEEECCCE
Confidence            345899999 79999999999999985 677777653

>PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed

Probab=95.94  E-value=0.013  Score=55.23  Aligned_cols=70  Identities=11%  Similarity=0.194  Sum_probs=47.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcCCCcEEEECCCC
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT  126 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~  126 (355)
                      ..++++|+| +|.+|++++..|.+.|++|++.+|+.++...+.....      ....+.+.+.. +.++|+||+|...
T Consensus       331 ~~k~vlIiG-aGgiG~aia~~L~~~G~~V~i~~R~~~~~~~la~~~~------~~~~~~~~~~~-l~~~DiVInatP~  400 (477)
T PRK09310        331 NNQHVAIVG-AGGAAKAIATTLARAGAELLIFNRTKAHAEALASRCQ------GKAFPLESLPE-LHRIDIIINCLPP  400 (477)
T ss_pred             CCCEEEEEc-CcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc------cceechhHhcc-cCCCCEEEEcCCC
Confidence            347899999 5999999999999999999999998765544322110      01111122222 4679999999754

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	355
3oh8_A	516	Crystal Structure Of The Nucleoside-Diphosphate Sug		2e-46
4b4o_A	298	Crystal Structure Of Human Epimerase Family Protein		4e-36
2c29_D	337	Structure Of Dihydroflavonol Reductase From Vitis V		5e-06
3ehe_A	313	Crystal Structure Of Udp-Glucose 4 Epimerase (Gale-		1e-04

>pdb|3OH8|A Chain A, Crystal Structure Of The Nucleoside-Diphosphate Sugar Epimerase From Corynebacterium Glutamicum. Northeast Structural Genomics Consortium Target Cgr91 Length = 516

Iteration: 1
 Score =  182 bits (463), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 113/306 (36%), Positives = 166/306 (54%), Gaps = 19/306 (6%)
Query: 49  SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEP 108
           S +TV++TG+ G +GR L  +LQ   H+V  L R   K     PGK  RF+  +  A   
Sbjct: 146 SPLTVAITGSRGLVGRALTAQLQTGGHEVIQLVRKEPK-----PGK--RFWDPLNPAS-- 196
Query: 109 QWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLV 168
              D + G+  +V+LAG PI  R++   K+ I+ESR+  T  + +L+ ES    + +  +
Sbjct: 197 ---DLLDGADVLVHLAGEPIFGRFNDSHKEAIRESRVLPTKFLAELVAES---TQCTTXI 250
Query: 169 SATALGYYGTSE-TEVFDESSPSGNDYLAEVCREWE-GTALKVNKDVRLALIRIGIVLGK 226
           SA+A+G+YG     E+  E S SG+D+LAEVCR+WE  TA   +   R+A IR G+ L  
Sbjct: 251 SASAVGFYGHDRGDEILTEESESGDDFLAEVCRDWEHATAPASDAGKRVAFIRTGVALSG 310
Query: 227 DGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRGVINGTAPNPV 286
            GG L  +  LF    GG  G G  WFSWI +DD+ ++ Y A+ +    G IN  APNPV
Sbjct: 311 RGGXLPLLKTLFSTGLGGKFGDGTSWFSWIAIDDLTDIYYRAIVDAQISGPINAVAPNPV 370
Query: 287 RLAEMCDHLGNVLGRPSWLPVPEFALKAVLG-EGA-FVVLEGQRVVPARAKELGFPFKYR 344
             A+    L     RP+++ +P    K +LG +GA  + L  QR  PA  + L   F+Y 
Sbjct: 371 SNADXTKILATSXHRPAFIQIPSLGPKILLGSQGAEELALASQRTAPAALENLSHTFRYT 430
Query: 345 YVKDAL 350
            +  A+
Sbjct: 431 DIGAAI 436

>pdb|4B4O|A Chain A, Crystal Structure Of Human Epimerase Family Protein Sdr39u1 (Isoform2) With Nadph Length = 298

Iteration: 1
 Score =  148 bits (374), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 107/306 (34%), Positives = 158/306 (51%), Gaps = 22/306 (7%)
Query: 53  VSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRD 112
           V V G TGFIG  L Q L A  H+V +++R         PG      PG +  +E     
Sbjct: 3   VLVGGGTGFIGTALTQLLNARGHEVTLVSRK--------PG------PGRITWDELA-AS 47
Query: 113 CIQGSTAVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVS 169
            +    A VNLAG  I     RW+   +KE+  SR+  T  +   I ++P+  +  VLV 
Sbjct: 48  GLPSCDAAVNLAGENILNPLRRWNETFQKEVLGSRLETTQLLAKAITKAPQPPKAWVLV- 106
Query: 170 ATALGYYGTSETEVFDESSPSGN-DYLAEVCREWEGTALKVNKDVRLALIRIGIVLGKDG 228
            T + YY  S T  +DE SP G+ D+ + +  +WE  A       R  ++R G+VLG+ G
Sbjct: 107 -TGVAYYQPSLTAEYDEDSPGGDFDFFSNLVTKWEAAARLPGDSTRQVVVRSGVVLGRGG 165
Query: 229 GALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRGVINGTAPNPVRL 288
           GA    +  F +  GGP+GSG Q+F WIH+ D+  ++  AL      GV+NG AP+    
Sbjct: 166 GAXGHXLLPFRLGLGGPIGSGHQFFPWIHIGDLAGILTHALEANHVHGVLNGVAPSSATN 225
Query: 289 AEMCDHLGNVLGRPSWLPVPEFALKAVLG-EGAFVVLEGQRVVPARAKELGFPFKYRYVK 347
           AE     G  LGR +++P+P   ++AV G + A  +LEGQ+V+P R    G+ + +  + 
Sbjct: 226 AEFAQTFGAALGRRAFIPLPSAVVQAVFGRQRAIXLLEGQKVIPRRTLATGYQYSFPELG 285
Query: 348 DALKAI 353
            ALK I
Sbjct: 286 AALKEI 291

>pdb|2C29|D Chain D, Structure Of Dihydroflavonol Reductase From Vitis Vinifera At 1.8 A. Length = 337

Iteration: 1
 Score = 48.5 bits (114), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 78/314 (24%), Positives = 128/314 (40%), Gaps = 36/314 (11%)
Query: 52  TVSVTGATGFIGRRLVQRLQADNHQVRVLTRS-----RSKAELIFPGKKTRF-FPGVMIA 105
           TV VTGA+GFIG  LV RL    + VR   R      + K  L  P  +T        +A
Sbjct: 7   TVCVTGASGFIGSWLVMRLLERGYTVRATVRDPTNVKKVKHLLDLPKAETHLTLWKADLA 66
Query: 106 EEPQWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPS 165
           +E  + + I+G T V ++A TP+    S + + E+ +  I     ++     + + VR  
Sbjct: 67  DEGSFDEAIKGCTGVFHVA-TPMDFE-SKDPENEVIKPTIEGMLGIMKSC-AAAKTVRRL 123
Query: 166 VLVSATALGYYGTSETEVFDESSPSGNDYL-AEVCREW---------EGTALKVNKDVRL 215
           V  S+         +  V+DES  S  ++  A+    W         E  A K  K+  +
Sbjct: 124 VFTSSAGTVNIQEHQLPVYDESCWSDMEFCRAKKMTAWMYFVSKTLAEQAAWKYAKENNI 183
Query: 216 ALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFS------WIHLDDIVNLIYEAL 269
             I I   L   G  +   +P  ++ A  P+   +  +S      ++HLDD+ N      
Sbjct: 184 DFITIIPTLVV-GPFIMSSMPPSLITALSPITGNEAHYSIIRQGQFVHLDDLCNAHIYLF 242
Query: 270 SNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRV 329
            NP   G    ++ + + L      L  +L R  +   PE+ +     +G    L+    
Sbjct: 243 ENPKAEGRYICSSHDCIIL-----DLAKML-REKY---PEYNIPTEF-KGVDENLKSVCF 292
Query: 330 VPARAKELGFPFKY 343
              +  +LGF FKY
Sbjct: 293 SSKKLTDLGFEFKY 306

>pdb|3EHE|A Chain A, Crystal Structure Of Udp-Glucose 4 Epimerase (Gale-1) From Archaeoglobus Fulgidus Length = 313

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 58/262 (22%), Positives = 109/262 (41%), Gaps = 34/262 (12%)
Query: 53  VSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRD 112
           + VTG  GFIG  +V +L   N  V +   S    E  F  +  R     + A++   +D
Sbjct: 4   IVVTGGAGFIGSHVVDKLSESNEIVVIDNLSSGNEE--FVNEAARLVKADLAADD--IKD 59
Query: 113 CIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATA 172
            ++G+  V ++A  P   R  +E   EI  + +  T ++++ + ++  GV   V  S + 
Sbjct: 60  YLKGAEEVWHIAANP-DVRIGAENPDEIYRNNVLATYRLLEAMRKA--GVSRIVFTSTST 116
Query: 173 LGYYGTSETEVFDESSPSGNDYLAEVCREWEGTALKVNK---------DVRLALIRIGIV 223
           +  YG ++        P+  DY       +  + L             D++  + R   V
Sbjct: 117 V--YGEAKV------IPTPEDYPTHPISLYGASKLACEALIESYCHTFDMQAWIYRFANV 168
Query: 224 LGKDGGALAKMIPLFMMFAGGP-----LGSGQQWFSWIHLDDIVNLIYEALSNPSYRGVI 278
           +G+       +    M     P     LG+G+Q  S+I++ D V+ +   L       + 
Sbjct: 169 IGRRS-THGVIYDFIMKLKRNPEELEILGNGEQNKSYIYISDCVDAMLFGLRGDERVNIF 227
Query: 279 NGTAPNPV---RLAEM-CDHLG 296
           N  + + +   R+AE+ C+ LG
Sbjct: 228 NIGSEDQIKVKRIAEIVCEELG 249

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	355
3oh8_A	516	Nucleoside-diphosphate sugar epimerase (SULA FAMI;	1e-143
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	3e-31
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	5e-26
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	9e-23
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	4e-21
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	4e-20
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	2e-17
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	2e-16
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	7e-16
1xq6_A	253	Unknown protein; structural genomics, protein stru	4e-15
2v6g_A	364	Progesterone 5-beta-reductase; tyrosine-dependent	2e-14
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	6e-14
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	2e-13
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	9e-13
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	5e-12
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	2e-11
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	6e-11
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	7e-11
3st7_A	369	Capsular polysaccharide synthesis enzyme CAP5F; ro	1e-10
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	2e-10
2rh8_A	338	Anthocyanidin reductase; flavonoids, rossmann fold	2e-10
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	2e-10
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	4e-10
2a35_A	215	Hypothetical protein PA4017; alpha-beta-alpha sand	1e-09
3vps_A	321	TUNA, NAD-dependent epimerase/dehydratase; tunicam	4e-09
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	6e-08
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	7e-08
3ay3_A	267	NAD-dependent epimerase/dehydratase; glucuronic ac	1e-07
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	2e-07
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	2e-07
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	3e-07
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	4e-07
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	1e-06
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	1e-06
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	2e-06
3ajr_A	317	NDP-sugar epimerase; L-threonine dehydrogenase, L-	3e-06
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	3e-06
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	4e-06
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	5e-06
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	3e-04
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	7e-06
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	8e-06
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	2e-05
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	2e-05
3ko8_A	312	NAD-dependent epimerase/dehydratase; isomerase, UD	3e-05
2p5y_A	311	UDP-glucose 4-epimerase; TTHA0591, structural geno	5e-05
1jay_A	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma	8e-05
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	1e-04
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-04
2hrz_A	342	AGR_C_4963P, nucleoside-diphosphate-sugar epimeras	2e-04
1z7e_A	660	Protein aRNA; rossmann fold, OB-like fold, hydrola	2e-04
3ehe_A	313	UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC,	6e-04
2yjz_A	201	Metalloreductase steap4; oxidoreductase, metabolic	6e-04

>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum} Length = 516

 Score =  414 bits (1065), Expect = e-143
 Identities = 105/314 (33%), Positives = 157/314 (50%), Gaps = 19/314 (6%)

Query: 44  HTQKASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVM 103
                S +TV++TG+ G +GR L  +LQ   H+V  L R   K    F            
Sbjct: 141 TLFDGSPLTVAITGSRGLVGRALTAQLQTGGHEVIQLVRKEPKPGKRFWDPLN------- 193

Query: 104 IAEEPQWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVR 163
                   D + G+  +V+LAG PI  R++   K+ I+ESR+  T  + +L+ ES    +
Sbjct: 194 -----PASDLLDGADVLVHLAGEPIFGRFNDSHKEAIRESRVLPTKFLAELVAEST---Q 245

Query: 164 PSVLVSATALGYYGTSET-EVFDESSPSGNDYLAEVCREWEGTALKVNKD-VRLALIRIG 221
            + ++SA+A+G+YG     E+  E S SG+D+LAEVCR+WE      +    R+A IR G
Sbjct: 246 CTTMISASAVGFYGHDRGDEILTEESESGDDFLAEVCRDWEHATAPASDAGKRVAFIRTG 305

Query: 222 IVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRGVINGT 281
           + L   GG L  +  LF    GG  G G  WFSWI +DD+ ++ Y A+ +    G IN  
Sbjct: 306 VALSGRGGMLPLLKTLFSTGLGGKFGDGTSWFSWIAIDDLTDIYYRAIVDAQISGPINAV 365

Query: 282 APNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGA--FVVLEGQRVVPARAKELGF 339
           APNPV  A+M   L   + RP+++ +P    K +LG      + L  QR  PA  + L  
Sbjct: 366 APNPVSNADMTKILATSMHRPAFIQIPSLGPKILLGSQGAEELALASQRTAPAALENLSH 425

Query: 340 PFKYRYVKDALKAI 353
            F+Y  +  A+   
Sbjct: 426 TFRYTDIGAAIAHE 439

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT} Length = 286

 Score =  118 bits (298), Expect = 3e-31
 Identities = 48/312 (15%), Positives = 92/312 (29%), Gaps = 43/312 (13%)

Query: 49  SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEP 108
           S   + + G  G +G  L +RL A  H+V  L RS                  +     P
Sbjct: 2   SLSKILIAGC-GDLGLELARRLTAQGHEVTGLRRSAQPMPAGVQ-------TLIADVTRP 53

Query: 109 Q-WRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVL 167
                 +     ++           S    +  + S +      +  +  +P  ++    
Sbjct: 54  DTLASIVHLRPEILVYCVAA-----SEYSDEHYRLSYVEGLRNTLSALEGAP--LQHVFF 106

Query: 168 VSATALGYYGTSETEVFDESSP-SGNDYLAEVCREWEGTALKVNKDVRLALIRIGIVLGK 226
           VS+T  G YG    E  DE +P    D+  +   E E      +  +    +R   + G 
Sbjct: 107 VSST--GVYGQEVEEWLDEDTPPIAKDFSGKRMLEAEALLAAYSSTI----LRFSGIYGP 160

Query: 227 DGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSY---RGVINGTAP 283
               + +              +   W + IH DD    I   +   S+     +   T  
Sbjct: 161 GRLRMIRQA-----QTPEQWPARNAWTNRIHRDDGAAFIAYLIQQRSHAVPERLYIVTDN 215

Query: 284 NPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPFKY 343
            P+ + ++   L +  G                          +++  AR    G+   Y
Sbjct: 216 QPLPVHDLLRWLADRQGIAYPAGATPPV------------QGNKKLSNARLLASGYQLIY 263

Query: 344 RYVKDALKAIMS 355
                   A+++
Sbjct: 264 PDYVSGYGALLA 275

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3} Length = 286

 Score =  104 bits (261), Expect = 5e-26
 Identities = 65/310 (20%), Positives = 108/310 (34%), Gaps = 34/310 (10%)

Query: 48  ASQMT--VSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIA 105
           ++ MT  +   G  G+  R L + L     ++   +R+  + E I          G    
Sbjct: 1   SNAMTGTLLSFGH-GYTARVLSRALAPQGWRIIGTSRNPDQMEAIRAS-------GAEPL 52

Query: 106 EEPQWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPS 165
             P     + G T ++       G                 V + + D I       R  
Sbjct: 53  LWPGEEPSLDGVTHLLISTAPDSGGD--------------PVLAALGDQIAARAAQFRWV 98

Query: 166 VLVSATALGYYGTSETEVFDESSPSGNDYLAEVCREWEGTALKVNKDVRLALIRIGIVLG 225
             +S T    YG  +    DE++P          R       +   ++ L + R+  + G
Sbjct: 99  GYLSTT--AVYGDHDGAWVDETTPLTPTAARGRWRVMAEQQWQAVPNLPLHVFRLAGIYG 156

Query: 226 KDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRGVINGTAPNP 285
              G  +K+    +     P     Q FS IH++DI  ++  +++ P    V N     P
Sbjct: 157 PGRGPFSKLGKGGIRRIIKP----GQVFSRIHVEDIAQVLAASMARPDPGAVYNVCDDEP 212

Query: 286 VRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFV-VLEGQRVVPARAK-ELGFPFKY 343
           V   ++  +   + G P  LP      KA L   A     E +RV   R K ELG   KY
Sbjct: 213 VPPQDVIAYAAELQGLP--LPPAVDFDKADLTPMARSFYSENKRVRNDRIKEELGVRLKY 270

Query: 344 RYVKDALKAI 353
              +  L+A+
Sbjct: 271 PNYRVGLEAL 280

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa} Length = 342

 Score = 96.6 bits (241), Expect = 9e-23
 Identities = 42/285 (14%), Positives = 98/285 (34%), Gaps = 31/285 (10%)

Query: 45  TQKASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMI 104
           ++  + +  +V GATG +G    + ++A  H + ++ R  S+ +      +        +
Sbjct: 8   SRPGAHVKYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQR-LAYLEPECRVA-EM 65

Query: 105 AEEPQWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRP 164
            +       ++G   V+  AG            +E   S +  T+       ++   V  
Sbjct: 66  LDHAGLERALRGLDGVIFSAGY---YPSRPRRWQEEVASALGQTNPFYAACLQA--RVPR 120

Query: 165 SVLVS-ATALGYYG----TSETEVFDESSPSGNDY-----LAEVCRE-WEGTALKVNKDV 213
            + V  A A+  +       E   +D      + Y       +   +  E         +
Sbjct: 121 ILYVGSAYAMPRHPQGLPGHEGLFYDSLPSGKSSYVLCKWALD--EQAREQAR----NGL 174

Query: 214 RLALIRIGIVLG-KDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNP 272
            + +   G+VLG  D G     + +  +  G          + I   +    +  AL   
Sbjct: 175 PVVIGIPGMVLGELDIGPTTGRV-ITAIGNGEMTHYVAGQRNVIDAAEAGRGLLMALERG 233

Query: 273 SYRG--VINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAV 315
                 ++ G   + + +A++   +  +LG+P+  P+     +A+
Sbjct: 234 RIGERYLLTG---HNLEMADLTRRIAELLGQPAPQPMSMAMARAL 275

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334} Length = 224

 Score = 89.7 bits (222), Expect = 4e-21
 Identities = 37/228 (16%), Positives = 72/228 (31%), Gaps = 23/228 (10%)

Query: 51  MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQW 110
           M ++V GATG  G  +V   +   H+V  + R   KA      +       ++       
Sbjct: 1   MKIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKA----ADRLGATVATLVKEPLVLT 56

Query: 111 RDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSA 170
              +    AVV+    P G+              +   + +V L+  S        ++ +
Sbjct: 57  EADLDSVDAVVDALSVPWGSGRG--------YLHLDFATHLVSLLRNS--DTLAVFILGS 106

Query: 171 TALGYYGTSETEVFDESSPSGND--YLAEVCREWEGTALKVNKDVRLALIRIGIVLGKDG 228
            +L   G     + D    + +   Y   + + +E   L++N +V    I          
Sbjct: 107 ASLAMPGADHPMILDFPESAASQPWYDGALYQYYEYQFLQMNANVNWIGISPSEAFPSGP 166

Query: 229 GALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRG 276
                            L  G+   S I   ++   I + L +P+   
Sbjct: 167 ATSYV-------AGKDTLLVGEDGQSHITTGNMALAILDQLEHPTAIR 207

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron} Length = 227

 Score = 87.1 bits (216), Expect = 4e-20
 Identities = 29/229 (12%), Positives = 72/229 (31%), Gaps = 18/229 (7%)

Query: 48  ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEE 107
                + + GA+GF+G  L+        +V  + R   K ++       +      ++  
Sbjct: 2   EKVKKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIKIENEH--LKVKKAD-VSSL 58

Query: 108 PQWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVL 167
            +  +  +G+ AV++                +I +  I+V   ++D + ++  GV   ++
Sbjct: 59  DEVCEVCKGADAVISAFNPGWN-------NPDIYDETIKVYLTIIDGVKKA--GVNRFLM 109

Query: 168 VSATALGYYGTSETEVFDESSPSGNDYLAEVCREWEGTALKVNKDVRLALIRIGIVLGKD 227
           V      +       +     P       +   E+    L   K++          +   
Sbjct: 110 VGGAGSLFIAPGLRLMDSGEVPENILPGVKALGEFYLNFLMKEKEIDWVFFSPAADMR-P 168

Query: 228 GGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRG 276
           G    +            +       S I ++D    + + L +P +  
Sbjct: 169 GVRTGRYR-----LGKDDMIVDIVGNSHISVEDYAAAMIDELEHPKHHQ 212

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes} Length = 221

 Score = 79.6 bits (196), Expect = 2e-17
 Identities = 28/228 (12%), Positives = 63/228 (27%), Gaps = 25/228 (10%)

Query: 51  MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQW 110
           M + + GATG  G R+++  +   H+V  + R+  K               +        
Sbjct: 1   MKIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQTHKDINI-----LQKDIFDLT 55

Query: 111 RDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSA 170
              +     VV+  G             +  E  +     ++ ++N +       ++V  
Sbjct: 56  LSDLSDQNVVVDAYGIS----------PDEAEKHVTSLDHLISVLNGT--VSPRLLVVGG 103

Query: 171 TALGYYGTSETEVFDESSPSGNDYL--AEVCREWEGTALKVNKDVRLALIRIGIVLGKDG 228
            A          + +        Y   A    +          +     I    +    G
Sbjct: 104 AASLQIDEDGNTLLESKGLREAPYYPTARAQAKQLEHLKSHQAEFSWTYISPSAMFE-PG 162

Query: 229 GALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRG 276
                          G  G+     S+I ++D    + + +  P++  
Sbjct: 163 ERTGDYQIGKDHLLFGSDGN-----SFISMEDYAIAVLDEIERPNHLN 205

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp} Length = 219

 Score = 76.6 bits (189), Expect = 2e-16
 Identities = 32/237 (13%), Positives = 81/237 (34%), Gaps = 38/237 (16%)

Query: 51  MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQW 110
           M + + G+TG +G+ L++ L   ++Q+    R   +          +     +     + 
Sbjct: 1   MKIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQY---NNVKAVHFDVDWTPEEM 57

Query: 111 RDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSA 170
              + G  A++N++G+           K + +  +    K++    ++   V+  +L+S 
Sbjct: 58  AKQLHGMDAIINVSGSG---------GKSLLKVDLYGAVKLMQAAEKA--EVKRFILLST 106

Query: 171 TALGYYGTSETEVFDESSPSGNDYLAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGA 230
                        FD      + Y+A+   +     L    ++   +I+ G +  ++   
Sbjct: 107 IFSLQPEKWIGAGFD---ALKDYYIAKHFAD---LYLTKETNLDYTIIQPGALTEEEA-- 158

Query: 231 LAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRG----VINGTAP 283
                        G +    +  +   + D+ + I E +      G    + NG   
Sbjct: 159 ------------TGLIDINDEVSASNTIGDVADTIKELVMTDHSIGKVISMHNGKTA 203

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans} Length = 236

 Score = 75.1 bits (185), Expect = 7e-16
 Identities = 45/269 (16%), Positives = 86/269 (31%), Gaps = 58/269 (21%)

Query: 41  TSDHTQKASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFP 100
           +         M V V GA G + R L+  L+   H+   + R+  +   +     +    
Sbjct: 12  SGRENLYFQGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPELRERGASDIVV 71

Query: 101 GVMIAEEPQWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRV----TSKVVDLIN 156
                 E  +        AVV  AG+   T           +  I +      K +    
Sbjct: 72  A---NLEEDFSHAFASIDAVVFAAGSGPHTG---------ADKTILIDLWGAIKTIQEAE 119

Query: 157 ESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDYL-----AEVCREWEGTALKVNK 211
           +   G++  ++VS  ++G      T   D+   +   YL     A+         LK   
Sbjct: 120 KR--GIKRFIMVS--SVG------TVDPDQGPMNMRHYLVAKRLAD-------DELK-RS 161

Query: 212 DVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSN 271
            +   ++R G +  ++      +                +    I   D+  +I E +  
Sbjct: 162 SLDYTIVRPGPLSNEESTGKVTVS-----------PHFSEITRSITRHDVAKVIAELVDQ 210

Query: 272 PSYRG----VINGTAPNPVRLAEMCDHLG 296
               G    V+NG  P    +A++ + LG
Sbjct: 211 QHTIGKTFEVLNGDTP----IAKVVEQLG 235

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A* Length = 253

 Score = 73.0 bits (179), Expect = 4e-15
 Identities = 43/270 (15%), Positives = 83/270 (30%), Gaps = 35/270 (12%)

Query: 48  ASQMTVSVTGATGFIGRRLVQRLQADNH--QVRVLTRSRSKAELIFPGKKTRFFPGVMIA 105
           A+  TV VTGA+G  G+ + ++L+  +     + L RS    E I             I 
Sbjct: 2   ANLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIGGEADVFIGD---IT 58

Query: 106 EEPQWRDCIQGSTAVVNLAGTPIGTRWS---SEIKKEIKESRIRVTSKVVD------LIN 156
           +        QG  A+V L       +     ++  +           + VD       I+
Sbjct: 59  DADSINPAFQGIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQID 118

Query: 157 ESPE-GVRPSVLVSATALGYYGTSETEVFDESSPSGNDYLAEVCREWEGTALKVNKDVRL 215
            +   GV+  V+V   ++G            +     + L    +      L  +     
Sbjct: 119 AAKVAGVKHIVVVG--SMG----GTNPDHPLNKLGNGNILVW--KRKAEQYLA-DSGTPY 169

Query: 216 ALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYR 275
            +IR G +L K+GG    ++            +       +   D+  +  +AL     +
Sbjct: 170 TIIRAGGLLDKEGGVRELLVGKDDELLQTDTKT-------VPRADVAEVCIQALLFEEAK 222

Query: 276 G----VINGTAPNPVRLAEMCDHLGNVLGR 301
                + +          +       V  R
Sbjct: 223 NKAFDLGSKPEGTSTPTKDFKALFSQVTSR 252

>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A* Length = 364

 Score = 72.5 bits (177), Expect = 2e-14
 Identities = 43/288 (14%), Positives = 87/288 (30%), Gaps = 38/288 (13%)

Query: 55  VTGATGFIGRRLVQRLQADNH-----QVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQ 109
           + G TG IG  L + L   +      +V  + R    A          +     I++   
Sbjct: 6   IVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPA--WHEDNPINYVQCD-ISDPDD 62

Query: 110 WRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVS 169
            +  +   T V ++         S+E  +E  E+  ++   V+D +  +   ++  + + 
Sbjct: 63  SQAKLSPLTDVTHVFYV-TWANRSTE--QENCEANSKMFRNVLDAVIPNCPNLK-HISLQ 118

Query: 170 ATALGYYGTSETEV--------FDESSP---SGNDYLAEVCREWEGTALKVNKDVRLALI 218
                Y G  E+          + E  P     N Y        E       + +  ++ 
Sbjct: 119 TGRKHYMGPFESYGKIESHDPPYTEDLPRLKYMNFYYDLEDIMLEEVE--KKEGLTWSVH 176

Query: 219 RIGIVLGKDGGALAKMIPLFMMFA------GGPL---GSGQQWFSWIHLDDIVNLIYE-- 267
           R G + G    ++  ++    ++A      G  L   G    W  +    D   +     
Sbjct: 177 RPGNIFGFSPYSMMNLVGTLCVYAAICKHEGKVLRFTGCKAAWDGYSDCSDADLIAEHHI 236

Query: 268 -ALSNPSYRG-VINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALK 313
            A  +P  +    N +  +  +       L    G           LK
Sbjct: 237 WAAVDPYAKNEAFNVSNGDVFKWKHFWKVLAEQFGVECGEYEEGVDLK 284

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa} Length = 322

 Score = 70.7 bits (174), Expect = 6e-14
 Identities = 60/326 (18%), Positives = 115/326 (35%), Gaps = 59/326 (18%)

Query: 52  TVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAE------LIFPGKKTR--FFPGVM 103
            V VTG TGF+G  +++ L  + + V    R+  + +         PG   +  FF    
Sbjct: 3   RVCVTGGTGFLGSWIIKSLLENGYSVNTTIRADPERKRDVSFLTNLPGASEKLHFFNAD- 61

Query: 104 IAEEPQWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVR 163
           ++    +   I+G   + + A +PI     SE ++ + +  +     ++     S   V+
Sbjct: 62  LSNPDSFAAAIEGCVGIFHTA-SPIDFA-VSEPEEIVTKRTVDGALGILKACVNSK-TVK 118

Query: 164 PSVLVSATALGYYGTSETEVFDESS-----------PSGNDY-----LAEVCREWEGTAL 207
             +  S+ +   +   + +V DES            P G +Y     LAE  +      L
Sbjct: 119 RFIYTSSGSAVSFNGKDKDVLDESDWSDVDLLRSVKPFGWNYAVSKTLAE--KA----VL 172

Query: 208 KVNKDVRLALIRI--GIVLGKDGGALAKMIP-----LFMMFAGGPLGSGQQWFSWIHLDD 260
           +  +   + ++ +    ++   G  +   +P       ++  G     G   F  +H+DD
Sbjct: 173 EFGEQNGIDVVTLILPFIV---GRFVCPKLPDSIEKALVLVLGKKEQIGVTRFHMVHVDD 229

Query: 261 IVNLIYEALSNPSYRGVING---TAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLG 317
           +       L N        G    +P  V + EM   L            PE+ +  V  
Sbjct: 230 VARAHIYLLENSV----PGGRYNCSPFIVPIEEMSQLLSAKY--------PEYQILTVDE 277

Query: 318 EGAFVVLEGQRVVPARAKELGFPFKY 343
                      +   +  + GF FKY
Sbjct: 278 LKEIKGARLPDLNTKKLVDAGFDFKY 303

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus} Length = 311

 Score = 68.7 bits (169), Expect = 2e-13
 Identities = 48/273 (17%), Positives = 92/273 (33%), Gaps = 48/273 (17%)

Query: 51  MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMI-AEEPQ 109
           + ++VTG TGF+G+ +V+ ++ D +   +LTRS          K    +   +       
Sbjct: 3   LKIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIG-------NKAINDYEYRVSDYTLED 55

Query: 110 WRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRV--TSKVVDLINESPEGVRPSVL 167
             + +    AVV+LA T  G++        I E       T  + D   E+   +   V 
Sbjct: 56  LINQLNDVDAVVHLAATR-GSQGK------ISEFHDNEILTQNLYDACYEN--NISNIVY 106

Query: 168 VSATALGYYGTSETEVFDESSPS-----------GNDYLAEVCREWEGTALKVNKDVRLA 216
            S  +   Y    +  ++E                 +++  +            K + + 
Sbjct: 107 ASTISA--YSDETSLPWNEKELPLPDLMYGVSKLACEHIGNIYSR--------KKGLCIK 156

Query: 217 LIRIGIVLGKDGGALAKMIPLFM--MFAGGPL---GSGQQWFSWIHLDDIVNLIYEALSN 271
            +R   + G        MI  F    F G  L    +      +++  D    +  AL  
Sbjct: 157 NLRFAHLYGF-NEKNNYMINRFFRQAFHGEQLTLHANSVAKREFLYAKDAAKSVIYALKQ 215

Query: 272 PSYRGVIN-GTAPNPVRLAEMCDHLGNVLGRPS 303
               G  N G+  + +   E+ + + N  G   
Sbjct: 216 EKVSGTFNIGSG-DALTNYEVANTINNAFGNKD 247

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A* Length = 206

 Score = 65.8 bits (161), Expect = 9e-13
 Identities = 17/84 (20%), Positives = 30/84 (35%), Gaps = 12/84 (14%)

Query: 49  SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMI---- 104
           +   +++ GATG  G   + +     ++V VL R  S+     P           +    
Sbjct: 2   AVKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEGP-------RPAHVVVGD 54

Query: 105 AEEPQW-RDCIQGSTAVVNLAGTP 127
             +       + G  AV+ L GT 
Sbjct: 55  VLQAADVDKTVAGQDAVIVLLGTR 78

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A Length = 242

 Score = 64.1 bits (156), Expect = 5e-12
 Identities = 38/231 (16%), Positives = 71/231 (30%), Gaps = 27/231 (11%)

Query: 49  SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEP 108
              +V + GA+G  GR L++ +       +V    R K        K      V   +  
Sbjct: 17  QNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYKNVNQEVVDFEKLD 76

Query: 109 QWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLV 168
            +    QG           +GT       +           K  +L      G +   L+
Sbjct: 77  DYASAFQGHDVGFCC----LGTTRGKAGAEGFVRVDRDYVLKSAELAKA--GGCKHFNLL 130

Query: 169 SATALGYYGTSETEVFDESSPSGNDYLAEVCREWEGTALKVNKDVRLALIRIGIVLGKDG 228
           S+      G  ++        S   YL +V  E E    ++  D R ++ R G++L    
Sbjct: 131 SS-----KGADKS--------SNFLYL-QVKGEVEAKVEELKFD-RYSVFRPGVLLCDRQ 175

Query: 229 G--ALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRGV 277
                  ++  F         SG      + +  +V  +   +  P  + +
Sbjct: 176 ESRPGEWLVRKFFGSLPDSWASGH----SVPVVTVVRAMLNNVVRPRDKQM 222

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A* Length = 337

 Score = 63.8 bits (156), Expect = 2e-11
 Identities = 69/324 (21%), Positives = 114/324 (35%), Gaps = 56/324 (17%)

Query: 52  TVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELI-----FPGKKTR--FFPGVMI 104
           TV VTGA+GFIG  LV RL    + VR   R  +  + +      P  +T    +    +
Sbjct: 7   TVCVTGASGFIGSWLVMRLLERGYTVRATVRDPTNVKKVKHLLDLPKAETHLTLWKAD-L 65

Query: 105 AEEPQWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRP 164
           A+E  + + I+G T V ++A TP+    S + + E+ +  I     ++     +   VR 
Sbjct: 66  ADEGSFDEAIKGCTGVFHVA-TPMDFE-SKDPENEVIKPTIEGMLGIMKSCAAAK-TVRR 122

Query: 165 SVLVSATALGYYGTSETEVFDESS-----------PSGNDY-----LAEVCREWEGTALK 208
            V  S+         +  V+DES             +   Y     LAE  +     A K
Sbjct: 123 LVFTSSAGTVNIQEHQLPVYDESCWSDMEFCRAKKMTAWMYFVSKTLAE--QA----AWK 176

Query: 209 VNKDVRLALIRI--GIVLG----KDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIV 262
             K+  +  I I   +V+G               L  +       S  +   ++HLDD+ 
Sbjct: 177 YAKENNIDFITIIPTLVVGPFIMSSMPPSLITA-LSPITGNEAHYSIIRQGQFVHLDDLC 235

Query: 263 NLIYEALSNPSYRGVING---TAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEG 319
           N       NP       G    + +   + ++   L      P    +P           
Sbjct: 236 NAHIYLFENPK----AEGRYICSSHDCIILDLAKMLREKY--PE-YNIPTEFKGVDENLK 288

Query: 320 AFVVLEGQRVVPARAKELGFPFKY 343
           +            +  +LGF FKY
Sbjct: 289 SV------CFSSKKLTDLGFEFKY 306

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A* Length = 267

 Score = 61.2 bits (149), Expect = 6e-11
 Identities = 46/243 (18%), Positives = 74/243 (30%), Gaps = 54/243 (22%)

Query: 55  VTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCI 114
           VTGA G +GR + +RL      +R+   S         G          +A+       +
Sbjct: 8   VTGAAGQLGRVMRERLAPMAEILRLADLSPLDP----AGPNEECVQC-DLADANAVNAMV 62

Query: 115 QGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVS-ATAL 173
            G   +V+L G  +   +      +I +  I     + +       G    V  S    +
Sbjct: 63  AGCDGIVHLGGISVEKPFE-----QILQGNIIGLYNLYEAARAH--GQPRIVFASSNHTI 115

Query: 174 GYYGTSETEVFDESSP-----------SGNDYLAEVCREWEGTALKVNKDVRLALIRIGI 222
           GYY   +TE      P              + LA +  +  G           AL+RIG 
Sbjct: 116 GYYP--QTERLGPDVPARPDGLYGVSKCFGENLARMYFDKFG--------QETALVRIGS 165

Query: 223 VLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSY-RGVINGT 281
                                    + +   +W   DD V+LI      P     V+ G 
Sbjct: 166 CT-------------------PEPNNYRMLSTWFSHDDFVSLIEAVFRAPVLGCPVVWGA 206

Query: 282 APN 284
           + N
Sbjct: 207 SAN 209

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2 Length = 308

 Score = 61.4 bits (149), Expect = 7e-11
 Identities = 46/296 (15%), Positives = 88/296 (29%), Gaps = 61/296 (20%)

Query: 48  ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFF--PGVMI- 104
            S+  + + GATG+IGR + +      H   +L R  + +      +    F   G  I 
Sbjct: 2   GSRSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIV 61

Query: 105 ----AEEPQWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPE 160
                +     + ++    V++  G+                 +I     ++  I E   
Sbjct: 62  HGSIDDHASLVEAVKNVDVVISTVGSL----------------QIESQVNIIKAIKEV-- 103

Query: 161 GVRPSVLVSATALGYYGTSETEVFDESSPSGNDYLAEVCREWEGTALKVNKDVRLAL--- 217
           G       S                     GND       E   +  +V   VR A+   
Sbjct: 104 GTVKRFFPSE-------------------FGNDVDNVHAVEPAKSVFEVKAKVRRAIEAE 144

Query: 218 ------IRIGIVLGKDGGALAKMIPLFMMFAGGP---LGSGQQWFSWIHLDDIVNLIYEA 268
                 +      G    +LA+               LG G     ++  +DI     +A
Sbjct: 145 GIPYTYVSSNCFAGYFLRSLAQ--AGLTAPPRDKVVILGDGNARVVFVKEEDIGTFTIKA 202

Query: 269 LSNPSY--RGVINGTAPNPVRLAEMCDHLGNVLGRPSW-LPVPEFALKAVLGEGAF 321
           + +P    + +      N + L E+       + +      VPE  +  ++ +  F
Sbjct: 203 VDDPRTLNKTLYLRLPANTLSLNELVALWEKKIDKTLEKAYVPEEEVLKLIADTPF 258

>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A Length = 369

 Score = 61.1 bits (148), Expect = 1e-10
 Identities = 50/270 (18%), Positives = 89/270 (32%), Gaps = 53/270 (19%)

Query: 51  MTVSVTGATGFIGRRLVQRLQAD-NHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQ 109
           M + +TGA GF+G+ L   L +  +H +  + R   + EL                    
Sbjct: 1   MNIVITGAKGFVGKNLKADLTSTTDHHIFEVHRQTKEEEL-------------------- 40

Query: 110 WRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVS 169
               +  +  +V+LAG         E  KE     +     V+D++  +    +P++L+S
Sbjct: 41  -ESALLKADFIVHLAGVN-----RPEHDKEFSLGNVSYLDHVLDILTRN--TKKPAILLS 92

Query: 170 ATALGYYGTSETEVFDESSPSGND-YLAE-VCREWEGTALKVNKDVRLALIRIGIVLGKD 227
                    S      + +P G      E + RE+            + + R   + GK 
Sbjct: 93  ---------SSI-QATQDNPYGESKLQGEQLLREYAE-----EYGNTVYIYRWPNLFGKW 137

Query: 228 G-GALAKMIPLF--MMFAGGPL--GSGQQWFSWIHLDDIVNLIYEALSNPSYR--GVING 280
                  +I  F   +     +         +  ++DDIV  I  A+        GV   
Sbjct: 138 CKPNYNSVIATFCYKIARNEEIQVNDRNVELTLNYVDDIVAEIKRAIEGTPTIENGVPTV 197

Query: 281 TAPNPVRLAEMCDHLGNVLGRPSWLPVPEF 310
                V L E+ D L           +P+ 
Sbjct: 198 PNVFKVTLGEIVDLLYKFKQSRLDRTLPKL 227

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A} Length = 236

 Score = 59.4 bits (144), Expect = 2e-10
 Identities = 30/238 (12%), Positives = 65/238 (27%), Gaps = 46/238 (19%)

Query: 42  SDHTQKASQMTVSVTGATGFIGRRLVQRL-QADNHQVRVLTRSRSKAELIFPGKKTRFFP 100
            +   +     V + GA G I R ++ +L      +  +  R  +K    +P        
Sbjct: 15  ENLYFQGHMKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKPYP-------T 67

Query: 101 GVMIAE-----EPQWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLI 155
              I           +  +QG   V                     E      + V+  +
Sbjct: 68  NSQIIMGDVLNHAALKQAMQGQDIVYANLTG---------------EDLDIQANSVIAAM 112

Query: 156 NESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDYLAEVCREWEGTALKVNKDVRL 215
                 V+  + V   +LG Y     +  + ++    + L    R     A++    +  
Sbjct: 113 KAC--DVKRLIFVL--SLGIYDEVPGKFVEWNNAVIGEPLKPF-RRAA-DAIE-ASGLEY 165

Query: 216 ALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPS 273
            ++R   +  +D           +     P          +    +  LI + +  P 
Sbjct: 166 TILRPAWLTDEDIIDYE------LTSRNEPFKGT-----IVSRKSVAALITDIIDKPE 212

>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A Length = 338

 Score = 60.3 bits (147), Expect = 2e-10
 Identities = 58/342 (16%), Positives = 108/342 (31%), Gaps = 71/342 (20%)

Query: 45  TQKASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELI-----FPGKKT-RF 98
                + T  V G TGF+   LV+ L    + V    R     + +            + 
Sbjct: 4   QHPIGKKTACVVGGTGFVASLLVKLLLQKGYAVNTTVRDPDNQKKVSHLLELQELGDLKI 63

Query: 99  FPGVMIAEEPQWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINES 158
           F    + +E  +   I G   V ++A TP+    S + + ++ +  I+    V+     +
Sbjct: 64  FRAD-LTDELSFEAPIAGCDFVFHVA-TPVHFA-SEDPENDMIKPAIQGVVNVMKACTRA 120

Query: 159 PEGVRPSVLVS--ATALGYYGTSETEVFDESS-----------PSGNDY-----LAEVCR 200
              V+  +L S  A            V DE +           P    Y     LAE  +
Sbjct: 121 K-SVKRVILTSSAAAVTINQLDGTGLVVDEKNWTDIEFLTSAKPPTWGYPASKTLAE--K 177

Query: 201 EWEGTALKVNKDVRLALIRI--GIVLG----KDGGALAKMI--------PLFMMFAGGPL 246
                A K  ++  + LI +   ++ G     D  +   +          L     G  +
Sbjct: 178 A----AWKFAEENNIDLITVIPTLMAGSSLTSDVPSSIGLAMSLITGNEFLINGMKGMQM 233

Query: 247 GSGQQWFSWIHLDDIVNLIYEALSNPSYRGVING---TAPNPVRLAEMCDHLGNVLGRPS 303
            SG    S  H++D+           S     +G          + E+   L        
Sbjct: 234 LSG--SVSIAHVEDVCRAHIFVAEKES----ASGRYICCAANTSVPELAKFLSKRY---- 283

Query: 304 WLPVPEFALKAVLGEGAFVVLEGQRVVPA--RAKELGFPFKY 343
               P++ +    G+         +++ +  +  + GF FKY
Sbjct: 284 ----PQYKVPTDFGD----FPPKSKLIISSEKLVKEGFSFKY 317

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A* Length = 377

 Score = 60.4 bits (147), Expect = 2e-10
 Identities = 51/294 (17%), Positives = 92/294 (31%), Gaps = 45/294 (15%)

Query: 44  HTQKASQMTVSVTGATGFIGRRLVQRLQADN-HQVRVLTR-SRSKAELIFPGKKTRFFPG 101
           +  K +   V V G  GF+G  LV+RL     +QV V+     ++   +      RF   
Sbjct: 26  NASKLANTNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEKINVPDHPAVRFSET 85

Query: 102 VMIAEEPQWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRV--TSKVVDLINESP 159
             I ++            V +LA    G + S  I   + +       T K+ + +    
Sbjct: 86  -SITDDALLASLQDEYDYVFHLAT-YHGNQSS--IHDPLADHENNTLTTLKLYERLKHF- 140

Query: 160 EGVRPSVLVSATALGYYGT-----SETEVFDESSPSGND-------YLAEV-CREWEGTA 206
           + ++  V  +A               TE  D  S   ND          E     +    
Sbjct: 141 KRLKKVVYSAAGCS-IAEKTFDDAKATEETDIVSLHNNDSPYSMSKIFGEFYSVYYHKQH 199

Query: 207 LKVNKDVRLALIRI------------GIVLGKDGGALAKMIPLFM--MFAGGPL---GSG 249
                 +     R             G   G        + P F+     G PL     G
Sbjct: 200 -----QLPTVRARFQNVYGPGEILGAGRWRGTPATVWRNVTPTFIYKALKGMPLPLENGG 254

Query: 250 QQWFSWIHLDDIVNLIYEALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPS 303
                +I ++D+ N +    ++ +  GV N  +     +A++   +  + G  +
Sbjct: 255 VATRDFIFVEDVANGLIACAADGTPGGVYNIASGKETSIADLATKINEITGNNT 308

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2 Length = 313

 Score = 59.2 bits (143), Expect = 4e-10
 Identities = 47/289 (16%), Positives = 97/289 (33%), Gaps = 42/289 (14%)

Query: 48  ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFP-GVMIAE 106
             +  V + G TG+IG+R+V    +  H   VL R    + +        F   G  + E
Sbjct: 2   DKKSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIE 61

Query: 107 -----EPQWRDCIQGSTAVVN-LAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPE 160
                  +  D ++    V++ LAG  +      ++             K+V+ I E+  
Sbjct: 62  ASLDDHQRLVDALKQVDVVISALAGGVLSHHILEQL-------------KLVEAIKEA-- 106

Query: 161 GVRPSVLVSATALGYYGTSETEVFDESSPSGNDYL--AEVCREWEGTALKVNKDVRLALI 218
           G     L S      +G     +     P    ++   +V R  E  ++          +
Sbjct: 107 GNIKRFLPSE-----FGMDPDIMEHALQPGSITFIDKRKVRRAIEAASIPY------TYV 155

Query: 219 RIGIVLGKDGGALAKMIPLFMMFAGGP---LGSGQQWFSWIHLDDIVNLIYEALSNPS-- 273
              +  G   G+LA++    MM         G G     W+  DD+     +++ +P   
Sbjct: 156 SSNMFAGYFAGSLAQL-DGHMMPPRDKVLIYGDGNVKGIWVDEDDVGTYTIKSIDDPQTL 214

Query: 274 YRGVINGTAPNPVRLAEMCDHLGNVLGRPSW-LPVPEFALKAVLGEGAF 321
            + +      N +   E+      +  +    + +      A + + ++
Sbjct: 215 NKTMYIRPPMNILSQKEVIQIWERLSEQNLDKIYISSQDFLADMKDKSY 263

>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2 Length = 215

 Score = 56.6 bits (137), Expect = 1e-09
 Identities = 36/238 (15%), Positives = 72/238 (30%), Gaps = 43/238 (18%)

Query: 47  KASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAE 106
            ++   V + GATG  G  L+ R+ ++    +V+  +R    L    +        +   
Sbjct: 2   HSTPKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARK--ALAEHPR----LDNPVGPL 55

Query: 107 EPQWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINE--SPEGVRP 164
                             GT I    S       +E+   V   +   + +     G R 
Sbjct: 56  AELLPQLDGSIDTAFCCLGTTIKEAGS-------EEAFRAVDFDLPLAVGKRALEMGARH 108

Query: 165 SVLVSATALGYYGTSETEVFDESSPSGNDYL---AEVCREWEGTALKVNKDVRLALIRIG 221
            ++VSA      G       D  S     Y     E+    E    +     +L + R  
Sbjct: 109 YLVVSA-----LGA------DAKSSI--FYNRVKGEL----EQALQEQGWP-QLTIARPS 150

Query: 222 IVLGK-DGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRGVI 278
           ++ G  +   LA+++   +      +  G+  +  I   D+   ++            
Sbjct: 151 LLFGPREEFRLAEILAAPIA----RILPGK--YHGIEACDLARALWRLALEEGKGVRF 202

>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis} Length = 321

 Score = 56.4 bits (137), Expect = 4e-09
 Identities = 46/284 (16%), Positives = 86/284 (30%), Gaps = 53/284 (18%)

Query: 45  TQKASQMTVSVTGATGFIGRRLVQRLQADNHQVRVL----TRSRSKAELIFPGKKTRFFP 100
            +   +  + +TG  GFIG  L + L A   +V VL           E      +     
Sbjct: 2   QRNTLKHRILITGGAGFIGGHLARALVASGEEVTVLDDLRVPPMIPPEGTGKFLEKPVLE 61

Query: 101 GVMIAEEPQWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIK-ESRIRVTSKVVDLINESP 159
                        +     V +LA        S   K+ +     +     ++ L     
Sbjct: 62  LEERD--------LSDVRLVYHLAS-HKSVPRS--FKQPLDYLDNVDSGRHLLALCTSV- 109

Query: 160 EGVRPSVLVSATALGYYGTSETEVFDESSPSG-----------NDYLAEVCREWEGTALK 208
            GV   V+ S   +  YG ++T    E SP              + +A   +        
Sbjct: 110 -GVPKVVVGSTCEV--YGQADTLPTPEDSPLSPRSPYAASKVGLEMVAGAHQRASVA--- 163

Query: 209 VNKDVRLALIRIGIVLG---KDGGALAKMIPLFM--MFAGGPL---GSGQQWFSWIHLDD 260
              +V +   R   V G   +        +P     +     L   G G+Q   + ++ D
Sbjct: 164 --PEVGIV--RFFNVYGPGERPDAL----VPRLCANLLTRNELPVEGDGEQRRDFTYITD 215

Query: 261 IVNLIYEALSNPSYRGVIN-GTAPNPVRLAEMCDHLGNVLGRPS 303
           +V+ +    + P    V+N G+    + + ++   L        
Sbjct: 216 VVDKLVALANRPLP-SVVNFGS-GQSLSVNDVIRILQATSPAAE 257

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp} Length = 289

 Score = 52.7 bits (127), Expect = 6e-08
 Identities = 9/43 (20%), Positives = 17/43 (39%), Gaps = 1/43 (2%)

Query: 51 MTVSVTGATGFIGRRLVQRL-QADNHQVRVLTRSRSKAELIFP 92
          M + +TGATG +G  +  +          +  R+  K    + 
Sbjct: 1  MNIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDDWR 43

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A* Length = 346

 Score = 52.7 bits (126), Expect = 7e-08
 Identities = 45/336 (13%), Positives = 86/336 (25%), Gaps = 73/336 (21%)

Query: 53  VSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAE-----E 107
           V + GATGFIG+ +       +    +L R   ++       K     G +I       +
Sbjct: 13  VLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIFKALEDKGAIIVYGLINEQ 72

Query: 108 PQWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVL 167
                 ++     +      + T     I  +I          +V  +     G     L
Sbjct: 73  EAMEKILKEHEIDIV-----VSTVGGESILDQI---------ALVKAMKAV--GTIKRFL 116

Query: 168 VSATALGYYGTSETEVFDESSPSGNDYLAEVCREWEGTALKVNKDVRLALIRIGI--VLG 225
            S                     G+D       E      +  + VR  +   GI     
Sbjct: 117 PSE-------------------FGHDVNRADPVEPGLNMYREKRRVRQLVEESGIPFTYI 157

Query: 226 KDGGALAKMIP-LFMMFAGGP-------LGSGQQWFSWIHLDDIVNLIYEALSNPSY--R 275
                 +             P        G G     ++   DI     + + +     +
Sbjct: 158 CCNSIASWPYYNNIHPSEVLPPTDFFQIYGDGNVKAYFVAGTDIGKFTMKTVDDVRTLNK 217

Query: 276 GVINGTAPNPVRLAEMCDHLGNVLGRPSW---------------LPVPEFALKA----VL 316
            V    + N + + E+       +GR                    +P+  + A    + 
Sbjct: 218 SVHFRPSCNCLNINELASVWEKKIGRTLPRVTVTEDDLLAAAGENIIPQSVVAAFTHDIF 277

Query: 317 GEGAFVVLEGQRVVPARAKELGFP-FKYRYVKDALK 351
            +G  V              L +P   +R V++   
Sbjct: 278 IKGCQVNFSIDGPEDVEVTTL-YPEDSFRTVEECFG 312

>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens} Length = 267

 Score = 51.5 bits (124), Expect = 1e-07
 Identities = 41/245 (16%), Positives = 74/245 (30%), Gaps = 58/245 (23%)

Query: 55  VTGATGFIGRRLVQRLQADNHQVRVLTR-SRSKAELIFPGKKTRFFPGVMIAEEPQWRDC 113
           VTGA G +G  +   L    H+VR+        AE               +A+     D 
Sbjct: 7   VTGAAGGVGSAIRPHLGTLAHEVRLSDIVDLGAAEAHE-----EIVAC-DLADAQAVHDL 60

Query: 114 IQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATAL 173
           ++    +++L G  +   W      +I ++ I     + +       G    ++ +++  
Sbjct: 61  VKDCDGIIHLGGVSVERPW-----NDILQANIIGAYNLYEAARNL--GKP-RIVFASSNH 112

Query: 174 GYYGTSETEVFDESSPS-----------GNDYLAEVCREWEGTALKVNKDVRLALIRIGI 222
                  T   D   P              + LA +              +    IRIG 
Sbjct: 113 TIGYYPRTTRIDTEVPRRPDSLYGLSKCFGEDLASLYYHKFD--------IETLNIRIGS 164

Query: 223 VLGK--DGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYR-GVIN 279
              K  D   +A                     +W+ +DD + L+  A   P     V+ 
Sbjct: 165 CFPKPKDARMMA---------------------TWLSVDDFMRLMKRAFVAPKLGCTVVY 203

Query: 280 GTAPN 284
           G + N
Sbjct: 204 GASAN 208

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa} Length = 307

 Score = 51.0 bits (122), Expect = 2e-07
 Identities = 50/344 (14%), Positives = 87/344 (25%), Gaps = 81/344 (23%)

Query: 49  SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFP-----GVM 103
           ++  + + G TG IGR +V       +    L R    A    P  K          GV+
Sbjct: 1   TENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAA--NPETKEELIDNYQSLGVI 58

Query: 104 IAE-----EPQWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINES 158
           + E            I+    V+  AG  +                I    K++  I E+
Sbjct: 59  LLEGDINDHETLVKAIKQVDIVICAAGRLL----------------IEDQVKIIKAIKEA 102

Query: 159 PEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDYLAEVCREWEGTALKVNKDVRLALI 218
             G       S                     G D       E      +    +R  + 
Sbjct: 103 --GNVKKFFPSE-------------------FGLDVDRHDAVEPVRQVFEEKASIRRVIE 141

Query: 219 RIGI--VLGKDGGALAKMIPLFMMFAGGPL--------GSGQQWFSWIHLDDIVNLIYEA 268
             G+              +                   G G    +++   D+      A
Sbjct: 142 AEGVPYTYLCCHAFTGYFLRNLAQLDATDPPRDKVVILGDGNVKGAYVTEADVGTFTIRA 201

Query: 269 LSNP--SYRGVINGTAPNPVRLAEMCDHLGNVLGRP-SWLPVPEFALKAVLGEGAF---- 321
            ++P    + V      N +   E+       +G+      V E  +   + E +F    
Sbjct: 202 ANDPNTLNKAVHIRLPKNYLTQNEVIALWEKKIGKTLEKTYVSEEQVLKDIQESSFPHNY 261

Query: 322 -------VVLEGQRVVPAR------AKELGFP-FKYRYVKDALK 351
                    ++G  V          A E  +P   Y    + L 
Sbjct: 262 LLALYHSQQIKGDAVYEIDPAKDIEASEA-YPDVTYTTADEYLN 304

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D Length = 287

 Score = 50.7 bits (122), Expect = 2e-07
 Identities = 13/44 (29%), Positives = 23/44 (52%), Gaps = 2/44 (4%)

Query: 51 MTVSVTGATGFIGRRLVQRLQA--DNHQVRVLTRSRSKAELIFP 92
           +++VTGATG +G  ++Q L       Q+  + R+  KA  +  
Sbjct: 1  FSIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKASTLAD 44

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A* Length = 318

 Score = 50.7 bits (121), Expect = 3e-07
 Identities = 44/292 (15%), Positives = 90/292 (30%), Gaps = 55/292 (18%)

Query: 45  TQKASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMI 104
            +   +  + + G TG+IG  +V+      H   V TR  S    +    ++    G +I
Sbjct: 6   EENGMKSKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEFQSL---GAII 62

Query: 105 AE-----EPQWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESP 159
            +       +  + ++    V++    P                +I    K+++ I  + 
Sbjct: 63  VKGELDEHEKLVELMKKVDVVISALAFP----------------QILDQFKILEAIKVA- 105

Query: 160 EGVRPSVLVSATALGYYGTSETEVFDESSPSGNDYLAEVCREWEGTALKVNKDVRLALIR 219
            G     L S              F      G +             ++  + +R A+  
Sbjct: 106 -GNIKRFLPSD-------------F------GVEEDRINALPPFEALIERKRMIRRAIEE 145

Query: 220 IGI--VLGKDGGALAKMIPLFMMFAGGP-----LGSGQQWFSWIHLDDIVNLIYEALSNP 272
             I           +  I   +            G+G+  F+  +  DI     +  ++P
Sbjct: 146 ANIPYTYVSANCFASYFINYLLRPYDPKDEITVYGTGEAKFAMNYEQDIGLYTIKVATDP 205

Query: 273 --SYRGVINGTAPNPVRLAEMCDHLGNVLGRP-SWLPVPEFALKAVLGEGAF 321
               R VI   + N +   E+       +G+    + VPE  + A+  E   
Sbjct: 206 RALNRVVIYRPSTNIITQLELISRWEKKIGKKFKKIHVPEEEIVALTKELPE 257

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 3r14_A* Length = 221

 Score = 49.2 bits (117), Expect = 4e-07
 Identities = 12/93 (12%), Positives = 26/93 (27%), Gaps = 13/93 (13%)

Query: 48  ASQMT--VSVTGATGFIGRRLVQRLQAD-NHQVRVLTRSRSKAELIFPGKKTRFFPGVMI 104
           ++ M   +++ GA G I + L   L    +  + +  R            +      V +
Sbjct: 1   SNAMYXYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRI----PPEIIDHERVTV 56

Query: 105 AE-----EPQWRDCIQGSTAV-VNLAGTPIGTR 131
            E            +  +  V V    +     
Sbjct: 57  IEGSFQNPGXLEQAVTNAEVVFVGAMESGSDMA 89

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A Length = 342

 Score = 48.4 bits (116), Expect = 1e-06
 Identities = 35/145 (24%), Positives = 57/145 (39%), Gaps = 13/145 (8%)

Query: 52  TVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAE-----LIFPGKKTRFFPGVM-IA 105
            V VTGA GF+   +V++L    ++VR   RS SK                    V  + 
Sbjct: 13  LVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDML 72

Query: 106 EEPQWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPS 165
           ++  + + I+G+  V ++A + +     S    E+    I  T   +     +P  V+  
Sbjct: 73  KQGAYDEVIKGAAGVAHIA-SVVS---FSNKYDEVVTPAIGGTLNALRAAAATP-SVKRF 127

Query: 166 VLVS--ATALGYYGTSETEVFDESS 188
           VL S   +AL      E    DE S
Sbjct: 128 VLTSSTVSALIPKPNVEGIYLDEKS 152

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A* Length = 352

 Score = 48.3 bits (115), Expect = 1e-06
 Identities = 13/36 (36%), Positives = 17/36 (47%)

Query: 52 TVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKA 87
          T++V GATG  G  L++   A  H VR    S    
Sbjct: 7  TIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGL 42

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A* Length = 351

 Score = 48.4 bits (116), Expect = 2e-06
 Identities = 19/97 (19%), Positives = 32/97 (32%), Gaps = 13/97 (13%)

Query: 39  FCTSDHTQKASQMTVSVTGATGFIGRRLVQRLQADNHQVRV-----------LTRSRSKA 87
           +         S  T  +TG  GFIG  L+++L   N  V             L   ++  
Sbjct: 14  YEEITQQLIFSPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLV 73

Query: 88  ELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLA 124
                  +  F  G  I +       ++G   V++ A
Sbjct: 74  STE-QWSRFCFIEG-DIRDLTTCEQVMKGVDHVLHQA 108

>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A* Length = 317

 Score = 47.3 bits (113), Expect = 3e-06
 Identities = 36/274 (13%), Positives = 80/274 (29%), Gaps = 50/274 (18%)

Query: 55  VTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRF-FPGVMIAEEPQWRDC 113
           VTG++G IG  LV  L     +  V+      A  I         F  + ++   +    
Sbjct: 4   VTGSSGQIGTELVPYLAEKYGKKNVI------ASDIVQRDTGGIKFITLDVSNRDEIDRA 57

Query: 114 IQ--GSTAVVNLAGTPIGTRWSSEIKKEIKESRIRV--TSKVVDLINESPEGVRPSVLVS 169
           ++     A+ +LAG         E K      ++ +  T  +++   +    V   V++ 
Sbjct: 58  VEKYSIDAIFHLAGILSAK---GE-KDPALAYKVNMNGTYNILEAAKQH--RV-EKVVIP 110

Query: 170 ATALGYYGTSETEVFDESSPS-----------GNDYLAEVCREWEGTALKVNKDVRLALI 218
           +T   +   +        + +             + L +   E  G       DVR   +
Sbjct: 111 STIGVFGPETPKNKVPSITITRPRTMFGVTKIAAELLGQYYYEKFGL------DVR--SL 162

Query: 219 RIGIVLG---KDGGALAKMIPLFM--MFAGGPL---GSGQQWFSWIHLDDIVNLIYEALS 270
           R   ++    +                          +  +    +++ D +  + +   
Sbjct: 163 RYPGIISYKAEPTAGTTDYAVEIFYYAVKREKYKCYLAPNRALPMMYMPDALKALVDLYE 222

Query: 271 NP----SYRGVINGTAPNPVRLAEMCDHLGNVLG 300
                   R   N TA      +E+   +   + 
Sbjct: 223 ADRDKLVLRNGYNVTAYT-FTPSELYSKIKERIP 255

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri} Length = 321

 Score = 47.2 bits (112), Expect = 3e-06
 Identities = 17/88 (19%), Positives = 33/88 (37%), Gaps = 8/88 (9%)

Query: 48  ASQMT-VSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFF--PGVMI 104
            S M  + + G TG+IG+ +V+   + +H   +  R  +        +    F   GV I
Sbjct: 1   GSHMEKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFRSMGVTI 60

Query: 105 AE-----EPQWRDCIQGSTAVVNLAGTP 127
            E       +    ++    V++    P
Sbjct: 61  IEGEMEEHEKMVSVLKQVDIVISALPFP 88

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A* Length = 286

 Score = 46.9 bits (112), Expect = 4e-06
 Identities = 11/40 (27%), Positives = 22/40 (55%), Gaps = 2/40 (5%)

Query: 55 VTGATGFIGRRLVQRLQA--DNHQVRVLTRSRSKAELIFP 92
          +TGATG +G  +++ L       Q+  + R+ +KA+ +  
Sbjct: 4  ITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALAA 43

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica} Length = 333

 Score = 46.5 bits (111), Expect = 5e-06
 Identities = 8/30 (26%), Positives = 13/30 (43%)

Query: 51 MTVSVTGATGFIGRRLVQRLQADNHQVRVL 80
            V +TG  G IG  + + L     +V  +
Sbjct: 22 KKVFITGICGQIGSHIAELLLERGDKVVGI 51

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica} Length = 333

 Score = 41.1 bits (97), Expect = 3e-04
 Identities = 14/81 (17%), Positives = 30/81 (37%), Gaps = 6/81 (7%)

Query: 234 MIPLFM--MFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRGVIN-GTAPNPVRLAE 290
            +P+F   +  G      +    ++ + D+      A+    + G  +  +    V + E
Sbjct: 198 PLPIFFQRLSEGKKCFVTKARRDFVFVKDLARATVRAVDGVGH-GAYHFSSG-TDVAIKE 255

Query: 291 MCDHLGNVLGRPSWLPVPEFA 311
           + D +   +  PS  P PE  
Sbjct: 256 LYDAVVEAMALPS-YPEPEIR 275

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A* Length = 330

 Score = 46.4 bits (111), Expect = 7e-06
 Identities = 14/62 (22%), Positives = 27/62 (43%), Gaps = 1/62 (1%)

Query: 41  TSDHTQKASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTR-SRSKAELIFPGKKTRFF 99
           +S    + S M + +TG  G +G  L++      H++ V+   +  K E++ P       
Sbjct: 11  SSGLVPRGSHMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGKREVLPPVAGLSVI 70

Query: 100 PG 101
            G
Sbjct: 71  EG 72

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A Length = 299

 Score = 45.8 bits (109), Expect = 8e-06
 Identities = 14/41 (34%), Positives = 20/41 (48%), Gaps = 1/41 (2%)

Query: 48 ASQMTVSVTGATGFIGRRLVQRLQAD-NHQVRVLTRSRSKA 87
            +  V V G TG  G  + + L  D   +VRV+TR+  K 
Sbjct: 3  VDKKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKK 43

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A* Length = 379

 Score = 45.4 bits (108), Expect = 2e-05
 Identities = 11/32 (34%), Positives = 18/32 (56%)

Query: 49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVL 80
            + +S+TGA GFI   + +RL+ + H V   
Sbjct: 28 ENLKISITGAGGFIASHIARRLKHEGHYVIAS 59

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A* Length = 352

 Score = 45.0 bits (107), Expect = 2e-05
 Identities = 16/87 (18%), Positives = 29/87 (33%), Gaps = 9/87 (10%)

Query: 47  KASQMTVSVTGATGFIGRRLVQRLQADNHQVRVL----TRSRSKAELIFPGKKTRFFPGV 102
            A      +TG  GFIG  L++ L   + +V  L    T  +   + +      + +   
Sbjct: 24  PAQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNF 83

Query: 103 M-----IAEEPQWRDCIQGSTAVVNLA 124
                 I       +   G   V++ A
Sbjct: 84  KFIQGDIRNLDDCNNACAGVDYVLHQA 110

>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} PDB: 3icp_A* 3aw9_A* Length = 312

 Score = 44.1 bits (105), Expect = 3e-05
 Identities = 13/30 (43%), Positives = 18/30 (60%)

Query: 51 MTVSVTGATGFIGRRLVQRLQADNHQVRVL 80
          M + VTG  GFIG  LV +L    ++V V+
Sbjct: 1  MRIVVTGGAGFIGSHLVDKLVELGYEVVVV 30

>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A* Length = 311

 Score = 43.7 bits (104), Expect = 5e-05
 Identities = 15/30 (50%), Positives = 18/30 (60%)

Query: 51 MTVSVTGATGFIGRRLVQRLQADNHQVRVL 80
          M V VTG  GFIG  +V+ L A   +V VL
Sbjct: 1  MRVLVTGGAGFIGSHIVEDLLARGLEVAVL 30

>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A* Length = 212

 Score = 42.1 bits (98), Expect = 8e-05
 Identities = 36/205 (17%), Positives = 58/205 (28%), Gaps = 26/205 (12%)

Query: 51  MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQW 110
           M V++ G TG +G+ L  RL    H++ V +R   KAE      +       +   + + 
Sbjct: 1   MRVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRIAGDASITGMKNE- 59

Query: 111 RDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSA 170
                   A        +   W   I        I     VV  +     G +     S 
Sbjct: 60  -------DAAEACDIAVLTIPWEHAIDTARDLKNILREKIVVSPLVPVSRGAKGFTYSS- 111

Query: 171 TALGYYGTSETEVFDESSPSGNDYLAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGA 230
                   S  E+  E   S      +V             ++         V G D  +
Sbjct: 112 ------ERSAAEIVAEVLES-----EKVVSALHTIPAARFANLDEKFDWDVPVCGDDDES 160

Query: 231 LAKMIPLFMMFAG------GPLGSG 249
              ++ L     G      GPL + 
Sbjct: 161 KKVVMSLISEIDGLRPLDAGPLSNS 185

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori} Length = 362

 Score = 42.3 bits (100), Expect = 1e-04
 Identities = 11/39 (28%), Positives = 18/39 (46%), Gaps = 2/39 (5%)

Query: 44 HTQKASQMTVSVTGATGFIGRRLVQRLQADN--HQVRVL 80
             +    T+ +TG  GF+G  L    Q ++   +V VL
Sbjct: 4  IDDELENQTILITGGAGFVGSNLAFHFQENHPKAKVVVL 42

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 42.5 bits (99), Expect = 2e-04
 Identities = 33/214 (15%), Positives = 71/214 (33%), Gaps = 55/214 (25%)

Query: 138 KEIKES-RIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESS-------- 188
           K++++  +  ++ + +D I  S + V  ++ +    L        + F E          
Sbjct: 36  KDVQDMPKSILSKEEIDHIIMSKDAVSGTLRL-FWTLLSKQEEMVQKFVEEVLRINYKFL 94

Query: 189 ----------PSGN--DYLAEVCREWEGTALKVNKDV-RLALIRIGIVLGKDGGALAKMI 235
                     PS     Y+ +  R +    +    +V RL      + L +   AL ++ 
Sbjct: 95  MSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPY---LKLRQ---ALLELR 148

Query: 236 PLFMMFAGGPLGSGQQW--------------FS----WIHL--DDIVNLIYEALSN---- 271
           P   +   G LGSG+ W                    W++L   +    + E L      
Sbjct: 149 PAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQ 208

Query: 272 --PSYRGVINGTAPNPVRLAEMCDHLGNVLGRPS 303
             P++    + ++   +R+  +   L  +L    
Sbjct: 209 IDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKP 242

>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens} Length = 342

 Score = 41.6 bits (98), Expect = 2e-04
 Identities = 11/37 (29%), Positives = 19/37 (51%), Gaps = 7/37 (18%)

Query: 51 MTVSVTGATGFIGRRLVQRLQAD-------NHQVRVL 80
          M +++ GA G +GR+L QRL  D         +  ++
Sbjct: 15 MHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLI 51

>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1 Length = 660

 Score = 41.9 bits (99), Expect = 2e-04
 Identities = 19/94 (20%), Positives = 31/94 (32%), Gaps = 3/94 (3%)

Query: 38  VFCTSDHTQKASQMTVSVTGATGFIGRRLVQR-LQADNHQVRVLTRSRSKAELIFPGKKT 96
              +        +  V + G  GFIG  L +R L+ D+++V  L                
Sbjct: 303 RLNSQPACTARRRTRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHF 362

Query: 97  RFFPGVMIAEEPQWRDCIQGSTAVVNLAG--TPI 128
            F  G +          ++    V+ L    TPI
Sbjct: 363 HFVEGDISIHSEWIEYHVKKCDVVLPLVAIATPI 396

>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} Length = 313

 Score = 40.2 bits (95), Expect = 6e-04
 Identities = 10/30 (33%), Positives = 20/30 (66%), Gaps = 1/30 (3%)

Query: 51 MTVSVTGATGFIGRRLVQRLQADNHQVRVL 80
            + VTG  GFIG  +V +L ++++++ V+
Sbjct: 2  SLIVVTGGAGFIGSHVVDKL-SESNEIVVI 30

>2yjz_A Metalloreductase steap4; oxidoreductase, metabolic syndrome; HET: NAP; 2.20A {Rattus norvegicus} Length = 201

 Score = 39.6 bits (92), Expect = 6e-04
 Identities = 11/46 (23%), Positives = 20/46 (43%), Gaps = 1/46 (2%)

Query: 48 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG 93
            Q  V + G TG  G+ L  ++    + V   +R+   + L+  G
Sbjct: 17 EKQGVVCIFG-TGDFGKSLGLKMLQCGYSVVFGSRNPQVSSLLPRG 61

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	355
4b4o_A	298	Epimerase family protein SDR39U1; isomerase; HET:	100.0
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	100.0
3ehe_A	313	UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC,	100.0
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	100.0
3oh8_A	516	Nucleoside-diphosphate sugar epimerase (SULA FAMI;	100.0
3ko8_A	312	NAD-dependent epimerase/dehydratase; isomerase, UD	100.0
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	100.0
4egb_A	346	DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce	100.0
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	100.0
4id9_A	347	Short-chain dehydrogenase/reductase; putative dehy	100.0
3enk_A	341	UDP-glucose 4-epimerase; seattle structural genomi	100.0
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	100.0
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	100.0
2p5y_A	311	UDP-glucose 4-epimerase; TTHA0591, structural geno	100.0
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	100.0
1e6u_A	321	GDP-fucose synthetase; epimerase/reductase, SDR, R	100.0
4b8w_A	319	GDP-L-fucose synthase; oxidoreductase; HET: NAP GD	100.0
3sc6_A	287	DTDP-4-dehydrorhamnose reductase; RFBD, structural	100.0
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	100.0
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	100.0
2pk3_A	321	GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor	100.0
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	100.0
2x6t_A	357	ADP-L-glycero-D-manno-heptose-6-epimerase; isomera	100.0
2c20_A	330	UDP-glucose 4-epimerase; carbohydrate metabolism,	100.0
2hun_A	336	336AA long hypothetical DTDP-glucose 4,6-dehydrat;	100.0
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	100.0
1eq2_A	310	ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin	100.0
3vps_A	321	TUNA, NAD-dependent epimerase/dehydratase; tunicam	100.0
1oc2_A	348	DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos	100.0
1r6d_A	337	TDP-glucose-4,6-dehydratase; rossmann fold, short-	100.0
1rpn_A	335	GDP-mannose 4,6-dehydratase; short-chain dehydroge	100.0
2yy7_A	312	L-threonine dehydrogenase; thermolabIle, flavobact	100.0
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	100.0
1ek6_A	348	UDP-galactose 4-epimerase; short-chain dehydrogena	100.0
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	100.0
2bll_A	345	Protein YFBG; decarboxylase, short chain dehydroge	100.0
2b69_A	343	UDP-glucuronate decarboxylase 1; UDP-glucoronic ac	100.0
1gy8_A	397	UDP-galactose 4-epimerase; oxidoreductase; HET: NA	100.0
1i24_A	404	Sulfolipid biosynthesis protein SQD1; SDR, short-c	100.0
1kew_A	361	RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo	100.0
1t2a_A	375	GDP-mannose 4,6 dehydratase; structural genomics c	100.0
2ydy_A	315	Methionine adenosyltransferase 2 subunit beta; oxi	100.0
1orr_A	347	CDP-tyvelose-2-epimerase; rossmann fold, short-cha	100.0
2z1m_A	345	GDP-D-mannose dehydratase; short-chain dehydrogena	100.0
1udb_A	338	Epimerase, UDP-galactose-4-epimerase; isomerase; H	100.0
1vl0_A	292	DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s	100.0
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	100.0
1n2s_A	299	DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold	100.0
2hrz_A	342	AGR_C_4963P, nucleoside-diphosphate-sugar epimeras	100.0
2v6g_A	364	Progesterone 5-beta-reductase; tyrosine-dependent	100.0
1db3_A	372	GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya	100.0
1n7h_A	381	GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR,	100.0
3ajr_A	317	NDP-sugar epimerase; L-threonine dehydrogenase, L-	100.0
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	100.0
1z7e_A	660	Protein aRNA; rossmann fold, OB-like fold, hydrola	100.0
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	100.0
2rh8_A	338	Anthocyanidin reductase; flavonoids, rossmann fold	100.0
1z45_A	699	GAL10 bifunctional protein; epimerase, mutarotase,	100.0
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	100.0
2ggs_A	273	273AA long hypothetical DTDP-4-dehydrorhamnose red	100.0
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	100.0
4f6c_A	427	AUSA reductase domain protein; thioester reductase	100.0
4f6l_B	508	AUSA reductase domain protein; thioester reductase	99.98
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	99.97
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	99.97
4dqv_A	478	Probable peptide synthetase NRP (peptide synthase;	99.97
3ay3_A	267	NAD-dependent epimerase/dehydratase; glucuronic ac	99.97
3st7_A	369	Capsular polysaccharide synthesis enzyme CAP5F; ro	99.97
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	99.97
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	99.96
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	99.96
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	99.96
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	99.96
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	99.96
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	99.96
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	99.96
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	99.96
1xq6_A	253	Unknown protein; structural genomics, protein stru	99.95
2a35_A	215	Hypothetical protein PA4017; alpha-beta-alpha sand	99.94
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	99.94
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	99.94
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	99.93
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	99.93
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	99.92
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	99.92
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	99.92
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	99.92
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	99.91
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	99.91
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	99.9
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	99.9
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	99.9
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	99.89
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	99.89
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	99.89
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	99.88
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	99.88
1spx_A	278	Short-chain reductase family member (5L265); paral	99.87
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	99.87
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	99.87
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	99.87
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	99.87
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	99.87
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	99.87
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	99.87
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	99.86
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	99.86
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.85
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	99.85
1xq1_A	266	Putative tropinone reducatse; structural genomics,	99.85
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	99.85
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	99.85
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	99.85
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	99.85
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	99.85
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	99.85
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	99.85
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	99.85
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	99.84
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	99.84
3imf_A	257	Short chain dehydrogenase; structural genomics, in	99.84
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	99.84
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	99.84
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	99.84
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	99.84
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	99.84
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	99.84
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	99.84
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	99.84
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	99.84
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	99.84
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	99.84
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	99.84
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	99.84
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	99.84
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	99.84
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	99.84
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	99.84
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	99.84
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	99.83
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	99.83
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	99.83
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	99.83
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	99.83
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	99.83
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	99.83
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	99.83
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	99.83
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	99.83
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	99.83
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	99.83
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	99.83
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	99.83
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	99.83
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	99.83
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	99.83
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	99.83
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	99.83
3rih_A	293	Short chain dehydrogenase or reductase; structural	99.82
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	99.82
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	99.82
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	99.82
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	99.82
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	99.82
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	99.82
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	99.82
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	99.82
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	99.82
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	99.82
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	99.82
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	99.82
4ibo_A	271	Gluconate dehydrogenase; enzyme function initiativ	99.82
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	99.82
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	99.82
4dqx_A	277	Probable oxidoreductase protein; structural genomi	99.82
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	99.82
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	99.82
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	99.82
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	99.82
4iin_A	271	3-ketoacyl-acyl carrier protein reductase (FABG);	99.82
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	99.82
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	99.82
1xhl_A	297	Short-chain dehydrogenase/reductase family member	99.82
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	99.82
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	99.82
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	99.82
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	99.82
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	99.82
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	99.82
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	99.82
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	99.82
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	99.82
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	99.81
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	99.81
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	99.81
3uce_A	223	Dehydrogenase; rossmann fold, oxidoreductase; HET:	99.81
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	99.81
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	99.81
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.81
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	99.81
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	99.81
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	99.81
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	99.81
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	99.81
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	99.81
3cxt_A	291	Dehydrogenase with different specificities; rossma	99.81
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	99.81
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	99.81
4e4y_A	244	Short chain dehydrogenase family protein; structur	99.81
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	99.81
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	99.81
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	99.8
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	99.8
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	99.8
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	99.8
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	99.8
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	99.8
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	99.8
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	99.8
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	99.8
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	99.8
4iiu_A	267	3-oxoacyl-[acyl-carrier protein] reductase; struct	99.8
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	99.8
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	99.8
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	99.8
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	99.8
1xkq_A	280	Short-chain reductase family member (5D234); parra	99.8
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	99.8
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	99.8
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.8
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	99.79
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	99.79
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	99.79
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	99.79
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	99.79
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	99.79
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	99.79
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	99.79
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	99.79
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	99.79
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	99.79
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	99.79
3ged_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	99.79
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	99.79
4b79_A	242	PA4098, probable short-chain dehydrogenase; oxidor	99.78
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	99.78
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	99.78
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	99.78
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	99.78
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	99.78
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	99.78
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	99.78
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	99.78
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	99.78
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	99.78
4imr_A	275	3-oxoacyl-(acyl-carrier-protein) reductase; oxidor	99.77
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	99.77
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	99.77
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.77
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	99.77
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	99.77
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.77
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	99.77
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	99.77
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	99.77
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	99.76
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	99.76
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	99.76
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	99.76
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	99.76
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	99.75
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	99.75
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	99.75
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	99.75
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	99.75
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	99.74
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	99.74
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	99.73
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	99.72
4hp8_A	247	2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi	99.71
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	99.71
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	99.71
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	99.7
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	99.7
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	99.69
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	99.69
1y7t_A	327	Malate dehydrogenase; NAD-dependent-MDH-NADPH comp	99.69
2fr1_A	486	Erythromycin synthase, eryai; short chain dehydrog	99.69
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	99.69
4h15_A	261	Short chain alcohol dehydrogenase-related dehydro;	99.68
2z5l_A	511	Tylkr1, tylactone synthase starter module and modu	99.68
4gkb_A	258	3-oxoacyl-[acyl-carrier protein] reductase; putati	99.67
1d7o_A	297	Enoyl-[acyl-carrier protein] reductase (NADH) PRE;	99.67
4fs3_A	256	Enoyl-[acyl-carrier-protein] reductase [NADPH] FA;	99.67
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	99.67
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	99.66
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	99.66
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	99.65
3mje_A	496	AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.	99.58
2o2s_A	315	Enoyl-acyl carrier reductase; enoyl reductase, tri	99.55
2ptg_A	319	Enoyl-acyl carrier reductase; apicomplexa, enoyl (	99.53
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	99.53
3qp9_A	525	Type I polyketide synthase pikaii; rossmann fold,	99.52
3lt0_A	329	Enoyl-ACP reductase; triclosan, triclosan variant,	99.47
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	99.29
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	99.27
2uv8_A	1887	Fatty acid synthase subunit alpha (FAS2); fatty ac	99.23
2pff_A	1688	Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl	99.16
2uv9_A	1878	Fatty acid synthase alpha subunits; fungal, dehydr	99.15
3ic5_A	118	Putative saccharopine dehydrogenase; structural ge	99.14
3zu3_A	405	Putative reductase YPO4104/Y4119/YP_4011; oxidored	99.13
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	99.12
1smk_A	326	Malate dehydrogenase, glyoxysomal; tricarboxylic c	99.11
3s8m_A	422	Enoyl-ACP reductase; rossmann fold, oxidoreductase	99.05
1hye_A	313	L-lactate/malate dehydrogenase; nucleotide binding	99.04
1b8p_A	329	Protein (malate dehydrogenase); oxidoreductase; 1.	99.04
4eue_A	418	Putative reductase CA_C0462; TER, biofuel, synthet	99.0
1o6z_A	303	MDH, malate dehydrogenase; halophilic, ION-binding	98.98
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	98.76
1ff9_A	450	Saccharopine reductase; lysine biosynthesis, alpha	98.66
1mld_A	314	Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D	98.64
2hmt_A	144	YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane	98.63
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	98.62
3zen_D	3089	Fatty acid synthase; transferase, mycolic acid bio	98.56
3abi_A	365	Putative uncharacterized protein PH1688; L-lysine	98.51
3llv_A	141	Exopolyphosphatase-related protein; NAD(P)-binding	98.51
2gk4_A	232	Conserved hypothetical protein; alpha-beta-alpha s	98.49
5mdh_A	333	Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH	98.48
3fi9_A	343	Malate dehydrogenase; structural genomics, oxidore	98.46
1lss_A	140	TRK system potassium uptake protein TRKA homolog;	98.46
2g1u_A	155	Hypothetical protein TM1088A; structural genomics,	98.37
1u7z_A	226	Coenzyme A biosynthesis bifunctional protein coabc	98.3
4ina_A	405	Saccharopine dehydrogenase; structural genomics, P	98.19
1id1_A	153	Putative potassium channel protein; RCK domain, E.	98.18
2axq_A	467	Saccharopine dehydrogenase; rossmann fold variant,	98.15
1jay_A	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma	98.13
2nqt_A	352	N-acetyl-gamma-glutamyl-phosphate reductase; apopr	98.13
1ur5_A	309	Malate dehydrogenase; oxidoreductase, tricarboxyli	98.11
2hjs_A	340	USG-1 protein homolog; aspartate-semialdehyde dehy	98.07
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	98.06
2ozp_A	345	N-acetyl-gamma-glutamyl-phosphate reductase; amino	98.05
3c85_A	183	Putative glutathione-regulated potassium-efflux S	98.02
3pqe_A	326	L-LDH, L-lactate dehydrogenase; FBP, oxidoreductas	98.0
4h7p_A	345	Malate dehydrogenase; ssgcid, structural G seattle	97.99
3vku_A	326	L-LDH, L-lactate dehydrogenase; rossmann fold, NAD	97.96
3gvi_A	324	Malate dehydrogenase; NAD, oxidoreductase, tricarb	97.96
1oju_A	294	MDH, malate dehydrogenase; hyperthermophilic, oxid	97.95
3fwz_A	140	Inner membrane protein YBAL; TRKA-N domain, E.coli	97.94
2z2v_A	365	Hypothetical protein PH1688; L-lysine dehydrogenas	97.94
3hhp_A	312	Malate dehydrogenase; MDH, citric acid cycle, TCA	97.92
3l4b_C	218	TRKA K+ channel protien TM1088B; potassium channel	97.91
1dih_A	273	Dihydrodipicolinate reductase; oxidoreductase; HET	97.89
3p7m_A	321	Malate dehydrogenase; putative dehydrogenase, enzy	97.88
1y6j_A	318	L-lactate dehydrogenase; southeast collaboratory f	97.84
3oj0_A	144	Glutr, glutamyl-tRNA reductase; structural genomic	97.82
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	97.78
2vns_A	215	Metalloreductase steap3; metal-binding, transmembr	97.78
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	97.78
1xyg_A	359	Putative N-acetyl-gamma-glutamyl-phosphate reduct;	97.77
3gg2_A	450	Sugar dehydrogenase, UDP-glucose/GDP-mannose dehyd	97.77
3d0o_A	317	L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, gly	97.77
4f3y_A	272	DHPR, dihydrodipicolinate reductase; structural ge	97.77
2eez_A	369	Alanine dehydrogenase; TTHA0216, structural genomi	97.76
1pzg_A	331	LDH, lactate dehydrogenase; apicomplexa, APAD, tet	97.75
3tl2_A	315	Malate dehydrogenase; center for structural genomi	97.75
4ggo_A	401	Trans-2-enoyl-COA reductase; rossmann fold, oxidor	97.74
3c24_A	286	Putative oxidoreductase; YP_511008.1, structural g	97.72
3nep_X	314	Malate dehydrogenase; halophIle, molecular adpatat	97.72
3pwk_A	366	Aspartate-semialdehyde dehydrogenase; NADP binding	97.71
1nyt_A	271	Shikimate 5-dehydrogenase; alpha/beta domains, WID	97.7
2x0j_A	294	Malate dehydrogenase; oxidoreductase, hyperthermop	97.7
3qha_A	296	Putative oxidoreductase; seattle structural genomi	97.67
1t2d_A	322	LDH-P, L-lactate dehydrogenase; ternary complex, o	97.67
4aj2_A	331	L-lactate dehydrogenase A chain; oxidoreductase-in	97.67
1ez4_A	318	Lactate dehydrogenase; rossmann fold, oxidoreducta	97.66
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	97.66
1ys4_A	354	Aspartate-semialdehyde dehydrogenase; oxidoreducta	97.64
1guz_A	310	Malate dehydrogenase; oxidoreductase, tricarboxyli	97.63
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	97.62
4b7c_A	336	Probable oxidoreductase; NADP cofactor, rossmann f	97.6
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	97.6
3ijp_A	288	DHPR, dihydrodipicolinate reductase; ssgcid, SBRI,	97.6
2r00_A	336	Aspartate-semialdehyde dehydrogenase; conformation	97.6
2aef_A	234	Calcium-gated potassium channel MTHK; rossmann fol	97.6
4e21_A	358	6-phosphogluconate dehydrogenase (decarboxylating;	97.59
2ewd_A	317	Lactate dehydrogenase,; protein-substrate_cofactor	97.57
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	97.57
2zqz_A	326	L-LDH, L-lactate dehydrogenase; oxidoreductase, ro	97.54
1ldn_A	316	L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NA	97.54
1lld_A	319	L-lactate dehydrogenase; oxidoreductase(CHOH (D)-N	97.54
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	97.54
4huj_A	220	Uncharacterized protein; PSI-biology, nysgrc, stru	97.53
2v6b_A	304	L-LDH, L-lactate dehydrogenase; oxidoreductase, ra	97.5
2hjr_A	328	Malate dehydrogenase; malaria, structural genomics	97.5
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	97.49
3dr3_A	337	N-acetyl-gamma-glutamyl-phosphate reductase; csgid	97.49
3don_A	277	Shikimate dehydrogenase; alpha-beta structure, ros	97.49
2ep5_A	350	350AA long hypothetical aspartate-semialdehyde deh	97.49
2egg_A	297	AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff	97.48
3g0o_A	303	3-hydroxyisobutyrate dehydrogenase; NAD(P), valine	97.47
4dll_A	320	2-hydroxy-3-oxopropionate reductase; structural ge	97.44
7mdh_A	375	Protein (malate dehydrogenase); chloroplastic mala	97.42
1mv8_A	436	GMD, GDP-mannose 6-dehydrogenase; rossman fold, do	97.41
4gbj_A	297	6-phosphogluconate dehydrogenase NAD-binding; stru	97.41
1bg6_A	359	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L	97.38
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	97.38
3ldh_A	330	Lactate dehydrogenase; oxidoreductase, CHOH donor,	97.38
4a7p_A	446	UDP-glucose dehydrogenase; oxidoreductase, carbohy	97.37
4e12_A	283	Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1	97.37
3doj_A	310	AT3G25530, dehydrogenase-like protein; gamma-hydro	97.36
3qy9_A	243	DHPR, dihydrodipicolinate reductase; rossmann fold	97.36
1p9l_A	245	Dihydrodipicolinate reductase; oxidoreductase, lys	97.36
1a5z_A	319	L-lactate dehydrogenase; oxidoreductase, glycolysi	97.35
3d1l_A	266	Putative NADP oxidoreductase BF3122; structural ge	97.35
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	97.35
4dpl_A	359	Malonyl-COA/succinyl-COA reductase; dinucleotide b	97.34
4dpk_A	359	Malonyl-COA/succinyl-COA reductase; dinucleotide b	97.34
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	97.34
2y0c_A	478	BCEC, UDP-glucose dehydrogenase; oxidoreductase, c	97.33
2ew2_A	316	2-dehydropantoate 2-reductase, putative; alpha-str	97.33
3pzr_A	370	Aspartate-semialdehyde dehydrogenase; NADP, oxidor	97.33
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	97.32
3l6d_A	306	Putative oxidoreductase; structural genomics, prot	97.32
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	97.31
3g79_A	478	NDP-N-acetyl-D-galactosaminuronic acid dehydrogen;	97.31
3uw3_A	377	Aspartate-semialdehyde dehydrogenase; structural g	97.31
3l9w_A	413	Glutathione-regulated potassium-efflux system Pro	97.3
2h78_A	302	Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC601	97.3
2vhw_A	377	Alanine dehydrogenase; NAD, secreted, oxidoreducta	97.3
2pv7_A	298	T-protein [includes: chorismate mutase (EC 5.4.99	97.28
3jyo_A	283	Quinate/shikimate dehydrogenase; enzyme-cofactor c	97.28
2xxj_A	310	L-LDH, L-lactate dehydrogenase; oxidoreductase, hy	97.28
1p77_A	272	Shikimate 5-dehydrogenase; NADPH, oxidoreductase;	97.28
1vpd_A	299	Tartronate semialdehyde reductase; structural geno	97.26
1y81_A	138	Conserved hypothetical protein; hyperthermophIle,	97.26
3pef_A	287	6-phosphogluconate dehydrogenase, NAD-binding; gam	97.25
3dtt_A	245	NADP oxidoreductase; structural genomics, joint ce	97.25
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	97.24
3gms_A	340	Putative NADPH:quinone reductase; structural genom	97.23
2hk9_A	275	Shikimate dehydrogenase; shikimate pathway, drug d	97.23
3tri_A	280	Pyrroline-5-carboxylate reductase; amino acid bios	97.23
3cky_A	301	2-hydroxymethyl glutarate dehydrogenase; rossmann	97.23
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	97.22
2ahr_A	259	Putative pyrroline carboxylate reductase; pyrrolin	97.22
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	97.22
2dpo_A	319	L-gulonate 3-dehydrogenase; structural genomics, N	97.21
3gt0_A	247	Pyrroline-5-carboxylate reductase; structural geno	97.19
3tz6_A	344	Aspartate-semialdehyde dehydrogenase; asadh, ASD,	97.19
1t4b_A	367	Aspartate-semialdehyde dehydrogenase; asadh, HOSR,	97.18
1pjc_A	361	Protein (L-alanine dehydrogenase); oxidoreductase,	97.18
3vtf_A	444	UDP-glucose 6-dehydrogenase; two discrete alpha/be	97.17
3pid_A	432	UDP-glucose 6-dehydrogenase; rossmann fold, oxidor	97.16
1nvt_A	287	Shikimate 5'-dehydrogenase; structural genomics, P	97.16
3u62_A	253	Shikimate dehydrogenase; shikimate pathway, oxidor	97.15
2rir_A	300	Dipicolinate synthase, A chain; structural genomic	97.15
1hyh_A	309	L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2	97.15
3tnl_A	315	Shikimate dehydrogenase; structural genomics, cent	97.14
3ggo_A	314	Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-b	97.14
1txg_A	335	Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxid	97.13
3pdu_A	287	3-hydroxyisobutyrate dehydrogenase family protein;	97.13
4eye_A	342	Probable oxidoreductase; structural genomics, niai	97.13
3d4o_A	293	Dipicolinate synthase subunit A; NP_243269.1, stru	97.12
1gpj_A	404	Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro	97.12
3pwz_A	272	Shikimate dehydrogenase 3; alpha-beta, oxidoreduct	97.11
3k96_A	356	Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA	97.1
2d4a_B	308	Malate dehydrogenase; archaea, hyperthermophIle, o	97.06
3hsk_A	381	Aspartate-semialdehyde dehydrogenase; candida albi	97.06
4g65_A	461	TRK system potassium uptake protein TRKA; structur	97.02
1p9o_A	313	Phosphopantothenoylcysteine synthetase; ligase; 2.	97.02
2uyy_A	316	N-PAC protein; long-chain dehydrogenase, cytokine;	97.0
2q3e_A	467	UDP-glucose 6-dehydrogenase; hexamer, structural g	97.0
1f0y_A	302	HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive	96.99
4gwg_A	484	6-phosphogluconate dehydrogenase, decarboxylating;	96.99
4ezb_A	317	Uncharacterized conserved protein; structural geno	96.99
3obb_A	300	Probable 3-hydroxyisobutyrate dehydrogenase; struc	96.98
3fbt_A	282	Chorismate mutase and shikimate 5-dehydrogenase fu	96.97
2i6t_A	303	Ubiquitin-conjugating enzyme E2-like isoform A; L-	96.96
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	96.95
1yb4_A	295	Tartronic semialdehyde reductase; structural genom	96.95
3phh_A	269	Shikimate dehydrogenase; shikimate pathway, helico	96.95
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	96.94
1ks9_A	291	KPA reductase;, 2-dehydropantoate 2-reductase; PAN	96.94
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	96.94
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	96.93
2o7s_A	523	DHQ-SDH PR, bifunctional 3-dehydroquinate dehydrat	96.92
4e4t_A	419	Phosphoribosylaminoimidazole carboxylase, ATPase;	96.91
3k5i_A	403	Phosphoribosyl-aminoimidazole carboxylase; purine	96.89
3t4e_A	312	Quinate/shikimate dehydrogenase; structural genomi	96.88
3o8q_A	281	Shikimate 5-dehydrogenase I alpha; structural geno	96.88
2d59_A	144	Hypothetical protein PH1109; COA binding, structur	96.87
1jw9_B	249	Molybdopterin biosynthesis MOEB protein; MOEB: mod	96.86
2yv3_A	331	Aspartate-semialdehyde dehydrogenase; aspartate pa	96.86
2raf_A	209	Putative dinucleotide-binding oxidoreductase; NP_7	96.86
3qsg_A	312	NAD-binding phosphogluconate dehydrogenase-like P;	96.85
2cf5_A	357	Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign	96.84
2f1k_A	279	Prephenate dehydrogenase; tyrosine synthesis, X-RA	96.83
3orq_A	377	N5-carboxyaminoimidazole ribonucleotide synthetas;	96.83
1evy_A	366	Glycerol-3-phosphate dehydrogenase; rossmann fold,	96.83
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	96.81
2gf2_A	296	Hibadh, 3-hydroxyisobutyrate dehydrogenase; struct	96.81

>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}

Probab=100.00  E-value=2.3e-46  Score=330.72  Aligned_cols=288  Identities=36%  Similarity=0.646  Sum_probs=236.1

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcCCCcEEEECCCCCCC-
Q 018503           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTPIG-  129 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~~~~-  129 (355)
                      |||||||||||||++|+++|+++||+|++++|++...               ++...+...+.++++|+|||+|+.... 
T Consensus         1 MkILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~~~~---------------~~~~~~~~~~~l~~~d~vihla~~~i~~   65 (298)
T 4b4o_A            1 MRVLVGGGTGFIGTALTQLLNARGHEVTLVSRKPGPG---------------RITWDELAASGLPSCDAAVNLAGENILN   65 (298)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTT---------------EEEHHHHHHHCCCSCSEEEECCCCCSSC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCcC---------------eeecchhhHhhccCCCEEEEeccCcccc
Confidence            7999999999999999999999999999999976431               111122334556899999999986422 


Q ss_pred             --CCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCCh-hHHHHHHHHHHHH
Q 018503          130 --TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGND-YLAEVCREWEGTA  206 (355)
Q Consensus       130 --~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~~-y~~k~~~~~~~~~  206 (355)
                        ..|.......+++.|+.++.+|+++++......+++|+.||.++  ||...+.+.+|+++..+. ++.+.+.+.+...
T Consensus        66 ~~~~~~~~~~~~~~~~~v~~t~~l~~~~~~~~~~~~~~i~~Ss~~v--yg~~~~~~~~E~~p~~~~~~~~~~~~~~e~~~  143 (298)
T 4b4o_A           66 PLRRWNETFQKEVLGSRLETTQLLAKAITKAPQPPKAWVLVTGVAY--YQPSLTAEYDEDSPGGDFDFFSNLVTKWEAAA  143 (298)
T ss_dssp             TTSCCCHHHHHHHHHHHHHHHHHHHHHHHHCSSCCSEEEEEEEGGG--SCCCSSCCBCTTCCCSCSSHHHHHHHHHHHHH
T ss_pred             hhhhhhhhhhhhhhhHHHHHHHHHHHHHHHhCCCceEEEEEeeeee--ecCCCCCcccccCCccccchhHHHHHHHHHHH
Confidence              35677788899999999999999999883233444777777777  998888889998887654 4666666666666


Q ss_pred             hccCCCCeEEEEEecEEEeCCCCcccchHHHHHHHhCCCCCCCCcceecccHHHHHHHHHHHHhCCCCCCceEecCCCcc
Q 018503          207 LKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRGVINGTAPNPV  286 (355)
Q Consensus       207 ~~~~~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~~~~~~i~~~~~~  286 (355)
                      .....+++++++||+.+||++.+....+........+..++++++.++|||++|+|++++.+++++...|+||+++++++
T Consensus       144 ~~~~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~ihv~Dva~a~~~~~~~~~~~g~yn~~~~~~~  223 (298)
T 4b4o_A          144 RLPGDSTRQVVVRSGVVLGRGGGAMGHMLLPFRLGLGGPIGSGHQFFPWIHIGDLAGILTHALEANHVHGVLNGVAPSSA  223 (298)
T ss_dssp             CCSSSSSEEEEEEECEEECTTSHHHHHHHHHHHTTCCCCBTTSCSBCCEEEHHHHHHHHHHHHHCTTCCEEEEESCSCCC
T ss_pred             HhhccCCceeeeeeeeEEcCCCCchhHHHHHHhcCCcceecccCceeecCcHHHHHHHHHHHHhCCCCCCeEEEECCCcc
Confidence            67777999999999999999876554444444444555568999999999999999999999999887889999999999


Q ss_pred             CHHHHHHHHHHHhCCCCCCCCcHHHHHHHhccc-ceeeecCccccchhHHhCCCCCCccCHHHHHHHHhC
Q 018503          287 RLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEG-AFVVLEGQRVVPARAKELGFPFKYRYVKDALKAIMS  355 (355)
Q Consensus       287 s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~k~~~lG~~p~~~~~~~~l~~~~~  355 (355)
                      |+.|+++.+++.+|++..+++|.+..+..+++. ......+++++++|++++||+|+|++++++|+++++
T Consensus       224 t~~e~~~~ia~~lgrp~~~pvP~~~~~~~~g~~~~~~~l~~~rv~~~kl~~~Gf~f~yp~l~~al~~l~~  293 (298)
T 4b4o_A          224 TNAEFAQTFGAALGRRAFIPLPSAVVQAVFGRQRAIMLLEGQKVIPRRTLATGYQYSFPELGAALKEIAE  293 (298)
T ss_dssp             BHHHHHHHHHHHHTCCCCCCBCHHHHHHHHCHHHHHHHHCCCCBCCHHHHHTTCCCSCCSHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHhCcCCcccCCHHHHHHHhcchhHHHhhCCCEEcHHHHHHCCCCCCCCCHHHHHHHHHH
Confidence            999999999999999877899999988877743 445667889999999999999999999999999863

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}

Probab=100.00  E-value=6.3e-42  Score=304.14  Aligned_cols=280  Identities=21%  Similarity=0.232  Sum_probs=221.9

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcCCCcEEEECCCCCCC
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTPIG  129 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~~~~  129 (355)
                      +|+|||||||||||++|+++|+++|++|++++|++.... +. ..   ....+|+. .+++.++++++|+|||+|+....
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~~-~~---~~~~~Dl~-~~~~~~~~~~~d~Vih~a~~~~~   75 (311)
T 3m2p_A            2 SLKIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIGNKA-IN-DY---EYRVSDYT-LEDLINQLNDVDAVVHLAATRGS   75 (311)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCC-------CC---EEEECCCC-HHHHHHHTTTCSEEEECCCCCCS
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCCccc-CC-ce---EEEEcccc-HHHHHHhhcCCCEEEEccccCCC
Confidence            579999999999999999999999999999999944333 22 11   14457888 88999999999999999997532


Q ss_pred             CCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCCCCccccCCCCCC--Chh-HHHHHHHHHHHH
Q 018503          130 TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSG--NDY-LAEVCREWEGTA  206 (355)
Q Consensus       130 ~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~--~~y-~~k~~~~~~~~~  206 (355)
                      .     ++...+++|+.++.++++++++  .++++|||+||.++  ||.....+++|+++..  ..| .+|...|.....
T Consensus        76 ~-----~~~~~~~~n~~~~~~ll~a~~~--~~~~r~v~~SS~~v--yg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~  146 (311)
T 3m2p_A           76 Q-----GKISEFHDNEILTQNLYDACYE--NNISNIVYASTISA--YSDETSLPWNEKELPLPDLMYGVSKLACEHIGNI  146 (311)
T ss_dssp             S-----SCGGGTHHHHHHHHHHHHHHHH--TTCCEEEEEEEGGG--CCCGGGCSBCTTSCCCCSSHHHHHHHHHHHHHHH
T ss_pred             C-----ChHHHHHHHHHHHHHHHHHHHH--cCCCEEEEEccHHH--hCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHH
Confidence            2     3456778999999999999999  78999999999998  9987778888888754  467 788888887777


Q ss_pred             hccCCCCeEEEEEecEEEeCCCCcccchHHHH--HHHhCCCC---CCCCcceecccHHHHHHHHHHHHhCCCCCCceEec
Q 018503          207 LKVNKDVRLALIRIGIVLGKDGGALAKMIPLF--MMFAGGPL---GSGQQWFSWIHLDDIVNLIYEALSNPSYRGVINGT  281 (355)
Q Consensus       207 ~~~~~~~~~~i~Rp~~i~G~~~~~~~~~~~~~--~~~~~~~~---~~~~~~~~~i~v~Dva~~~~~~~~~~~~~~~~~i~  281 (355)
                      +..+.+++++++||+.+||+..... .+++.+  ....+.++   ++++..++++|++|+|++++.+++++..+++||++
T Consensus       147 ~~~~~g~~~~ilRp~~v~G~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~v~Dva~a~~~~~~~~~~~~~~~i~  225 (311)
T 3m2p_A          147 YSRKKGLCIKNLRFAHLYGFNEKNN-YMINRFFRQAFHGEQLTLHANSVAKREFLYAKDAAKSVIYALKQEKVSGTFNIG  225 (311)
T ss_dssp             HHHHSCCEEEEEEECEEECSCC--C-CHHHHHHHHHHTCCCEEESSBCCCCEEEEEHHHHHHHHHHHTTCTTCCEEEEEC
T ss_pred             HHHHcCCCEEEEeeCceeCcCCCCC-CHHHHHHHHHHcCCCeEEecCCCeEEceEEHHHHHHHHHHHHhcCCCCCeEEeC
Confidence            7777799999999999999986532 233322  33445553   67889999999999999999999987667799999


Q ss_pred             CCCccCHHHHHHHHHHHhCCCCCC-CCcHHHHHHHhcccceeeecCccccchhHHh-CCCCCCccCHHHHHHHHhC
Q 018503          282 APNPVRLAEMCDHLGNVLGRPSWL-PVPEFALKAVLGEGAFVVLEGQRVVPARAKE-LGFPFKYRYVKDALKAIMS  355 (355)
Q Consensus       282 ~~~~~s~~el~~~i~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~-lG~~p~~~~~~~~l~~~~~  355 (355)
                      +++++|+.|+++.+++.+|.+..+ ..+.+         .........++++|+++ |||+|+++ ++++|+++++
T Consensus       226 ~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~---------~~~~~~~~~~d~~k~~~~lG~~p~~~-~~~~l~~~~~  291 (311)
T 3m2p_A          226 SGDALTNYEVANTINNAFGNKDNLLVKNPN---------ANEGIHSSYMDSSKAKELLDFSTDYN-FATAVEEIHL  291 (311)
T ss_dssp             CSCEECHHHHHHHHHHHTTCTTCEEECSSS---------BCCSCCCBCBCCHHHHHHSCCCCSCC-HHHHHHHHHH
T ss_pred             CCCcccHHHHHHHHHHHhCCCCcceecCCC---------CCCCcCceecCHHHHHHHhCCCcccC-HHHHHHHHHH
Confidence            999999999999999999987332 22221         11123456778888976 99999996 9999999863

>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0

Probab=100.00  E-value=1.4e-41  Score=302.13  Aligned_cols=286  Identities=20%  Similarity=0.295  Sum_probs=218.1

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCC-chhhccCCCCCCccCCCeeecCCcchhhhcCCCcEEEECCCCCCC
Q 018503           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSR-SKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTPIG  129 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~-~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~~~~  129 (355)
                      |+|||||||||||++|+++|+++|+ ++++++.. ..........   .....|+.+ +++.++++++|+|||+|+.. .
T Consensus         2 ~~vlVTGatG~iG~~l~~~L~~~g~-~v~~~~~~~~~~~~~~~~~---~~~~~Dl~~-~~~~~~~~~~d~vih~a~~~-~   75 (313)
T 3ehe_A            2 SLIVVTGGAGFIGSHVVDKLSESNE-IVVIDNLSSGNEEFVNEAA---RLVKADLAA-DDIKDYLKGAEEVWHIAANP-D   75 (313)
T ss_dssp             -CEEEETTTSHHHHHHHHHHTTTSC-EEEECCCSSCCGGGSCTTE---EEECCCTTT-SCCHHHHTTCSEEEECCCCC-C
T ss_pred             CEEEEECCCchHHHHHHHHHHhCCC-EEEEEcCCCCChhhcCCCc---EEEECcCCh-HHHHHHhcCCCEEEECCCCC-C
Confidence            6899999999999999999999995 55555543 3322221111   134578888 88999999999999999964 2


Q ss_pred             CCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCCCCccccCCCCC--CChh-HHHHHHHHHHHH
Q 018503          130 TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPS--GNDY-LAEVCREWEGTA  206 (355)
Q Consensus       130 ~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~--~~~y-~~k~~~~~~~~~  206 (355)
                      ..+...++...+++|+.++.++++++++  .+++++||+||.++  ||.....+++|+.+.  ...| .+|...|.+...
T Consensus        76 ~~~~~~~~~~~~~~nv~~~~~l~~~~~~--~~~~~iv~~SS~~v--yg~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~  151 (313)
T 3ehe_A           76 VRIGAENPDEIYRNNVLATYRLLEAMRK--AGVSRIVFTSTSTV--YGEAKVIPTPEDYPTHPISLYGASKLACEALIES  151 (313)
T ss_dssp             CC-CCCCHHHHHHHHHHHHHHHHHHHHH--HTCCEEEEECCGGG--GCSCSSSSBCTTSCCCCCSHHHHHHHHHHHHHHH
T ss_pred             hhhhhhCHHHHHHHHHHHHHHHHHHHHH--cCCCeEEEeCchHH--hCcCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
Confidence            3445667788999999999999999998  68889999999998  998777888887764  4567 888888888887


Q ss_pred             hccCCCCeEEEEEecEEEeCCCCcccchHHH-H-HHHhC-CC---CCCCCcceecccHHHHHHHHHHHHhCCCCCCceEe
Q 018503          207 LKVNKDVRLALIRIGIVLGKDGGALAKMIPL-F-MMFAG-GP---LGSGQQWFSWIHLDDIVNLIYEALSNPSYRGVING  280 (355)
Q Consensus       207 ~~~~~~~~~~i~Rp~~i~G~~~~~~~~~~~~-~-~~~~~-~~---~~~~~~~~~~i~v~Dva~~~~~~~~~~~~~~~~~i  280 (355)
                      +..+.+++++++||+++||++...  .++.. + ....+ .+   ++++++.++++|++|+|++++.+++....+++||+
T Consensus       152 ~~~~~g~~~~ilRp~~v~G~~~~~--~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~~ni  229 (313)
T 3ehe_A          152 YCHTFDMQAWIYRFANVIGRRSTH--GVIYDFIMKLKRNPEELEILGNGEQNKSYIYISDCVDAMLFGLRGDERVNIFNI  229 (313)
T ss_dssp             HHHHTTCEEEEEECSCEESTTCCC--SHHHHHHHHHHHCTTEEEESTTSCCEECCEEHHHHHHHHHHHTTCCSSEEEEEC
T ss_pred             HHHhcCCCEEEEeeccccCcCCCc--ChHHHHHHHHHcCCCceEEeCCCCeEEeEEEHHHHHHHHHHHhccCCCCceEEE
Confidence            777789999999999999997643  22222 2 33333 22   37888999999999999999999995556679999


Q ss_pred             cCCCccCHHHHHHHHHHHhCCCCCCCCcHHHHHHHhcccceeeecCccccchhHHhCCCCCCccCHHHHHHHHhC
Q 018503          281 TAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPFKYRYVKDALKAIMS  355 (355)
Q Consensus       281 ~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~lG~~p~~~~~~~~l~~~~~  355 (355)
                      ++++++|+.|+++.+++.+|.++.+..+.... ...++     .....++++|+++|||+|+++ ++++|+++++
T Consensus       230 ~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~-~~~~~-----~~~~~~d~~k~~~lG~~p~~~-~~e~l~~~~~  297 (313)
T 3ehe_A          230 GSEDQIKVKRIAEIVCEELGLSPRFRFTGGDR-GWKGD-----VPVMLLSIEKLKRLGWKPRYN-SEEAVRMAVR  297 (313)
T ss_dssp             CCSCCEEHHHHHHHHHHHTTCCCEEEEC------------------CCBCCHHHHHHTCCCSCC-HHHHHHHHHH
T ss_pred             CCCCCeeHHHHHHHHHHHhCCCCceEECCCcc-CCccc-----cceeccCHHHHHHcCCCCCCC-HHHHHHHHHH
Confidence            99999999999999999999875444333111 01111     134567888898899999996 9999999863

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*

Probab=100.00  E-value=6.9e-42  Score=309.04  Aligned_cols=294  Identities=16%  Similarity=0.157  Sum_probs=226.6

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccC------------CCCCCccCCCeeecCCcchhhhcC
Q 018503           48 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIF------------PGKKTRFFPGVMIAEEPQWRDCIQ  115 (355)
Q Consensus        48 ~~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~------------~~~~~~~~~~~d~~~~~~~~~~~~  115 (355)
                      +++|+|||||||||||++|+++|+++|++|++++|+........            ...   ....+|+.|.+.+.++++
T Consensus        23 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~Dl~d~~~~~~~~~   99 (351)
T 3ruf_A           23 FSPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRF---CFIEGDIRDLTTCEQVMK   99 (351)
T ss_dssp             HSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTE---EEEECCTTCHHHHHHHTT
T ss_pred             CCCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccccCCce---EEEEccCCCHHHHHHHhc
Confidence            34689999999999999999999999999999999765422110            111   134578889999999999


Q ss_pred             CCcEEEECCCCCCCCCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCCCCccccCCCCC--CCh
Q 018503          116 GSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPS--GND  193 (355)
Q Consensus       116 ~~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~--~~~  193 (355)
                      ++|+|||+|+... ......++...+++|+.++.++++++++  .++++|||+||.++  ||...+.+++|+++.  ...
T Consensus       100 ~~d~Vih~A~~~~-~~~~~~~~~~~~~~nv~~~~~ll~a~~~--~~~~~~v~~SS~~v--yg~~~~~~~~E~~~~~p~~~  174 (351)
T 3ruf_A          100 GVDHVLHQAALGS-VPRSIVDPITTNATNITGFLNILHAAKN--AQVQSFTYAASSST--YGDHPALPKVEENIGNPLSP  174 (351)
T ss_dssp             TCSEEEECCCCCC-HHHHHHCHHHHHHHHTHHHHHHHHHHHH--TTCSEEEEEEEGGG--GTTCCCSSBCTTCCCCCCSH
T ss_pred             CCCEEEECCccCC-cchhhhCHHHHHHHHHHHHHHHHHHHHH--cCCCEEEEEecHHh--cCCCCCCCCccCCCCCCCCh
Confidence            9999999999642 2233455678899999999999999999  78999999999999  998878888888875  346


Q ss_pred             h-HHHHHHHHHHHHhccCCCCeEEEEEecEEEeCCCCcc---cchHHHH--HHHhCCCC---CCCCcceecccHHHHHHH
Q 018503          194 Y-LAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGAL---AKMIPLF--MMFAGGPL---GSGQQWFSWIHLDDIVNL  264 (355)
Q Consensus       194 y-~~k~~~~~~~~~~~~~~~~~~~i~Rp~~i~G~~~~~~---~~~~~~~--~~~~~~~~---~~~~~~~~~i~v~Dva~~  264 (355)
                      | .+|...|.....+..+.+++++++||+++||++....   ..+++.+  ....+.++   +++++.++++|++|+|++
T Consensus       175 Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~a  254 (351)
T 3ruf_A          175 YAVTKYVNEIYAQVYARTYGFKTIGLRYFNVFGRRQDPNGAYAAVIPKWTAAMLKGDDVYINGDGETSRDFCYIDNVIQM  254 (351)
T ss_dssp             HHHHHHHHHHHHHHHHHHHCCCCEEEEECSEESTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECCEEHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHhCCCEEEEeeCceeCcCCCCCcchhhHHHHHHHHHHcCCCcEEeCCCCeEEeeEEHHHHHHH
Confidence            7 7788888777777666799999999999999975332   2333333  44455554   778899999999999999


Q ss_pred             HHHHHhCC--CCCCceEecCCCccCHHHHHHHHHHHhCCCCCC-CCcHHHHHHHhcccceeeecCccccchhHHh-CCCC
Q 018503          265 IYEALSNP--SYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWL-PVPEFALKAVLGEGAFVVLEGQRVVPARAKE-LGFP  340 (355)
Q Consensus       265 ~~~~~~~~--~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~-lG~~  340 (355)
                      ++.++..+  ..+++||+++++++|+.|+++.+++.+|++..+ ..+..     .............++++|+++ |||+
T Consensus       255 ~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~-----~~~~~~~~~~~~~~d~~k~~~~lG~~  329 (351)
T 3ruf_A          255 NILSALAKDSAKDNIYNVAVGDRTTLNELSGYIYDELNLIHHIDKLSIK-----YREFRSGDVRHSQADVTKAIDLLKYR  329 (351)
T ss_dssp             HHHHHTCCGGGCSEEEEESCSCCEEHHHHHHHHHHHHHTTCCC-----E-----EECCCTTCCSBCCBCCHHHHHHHCCC
T ss_pred             HHHHHhhccccCCCEEEeCCCCcccHHHHHHHHHHHhCccccccccccc-----ccCCCCCccceeeeCHHHHHHHhCCC
Confidence            99999873  256799999999999999999999999985321 11110     001001112355678888976 9999


Q ss_pred             CCccCHHHHHHHHhC
Q 018503          341 FKYRYVKDALKAIMS  355 (355)
Q Consensus       341 p~~~~~~~~l~~~~~  355 (355)
                      |+++ ++++|+++++
T Consensus       330 p~~~-~~~~l~~~~~  343 (351)
T 3ruf_A          330 PNIK-IREGLRLSMP  343 (351)
T ss_dssp             CCCC-HHHHHHHHHH
T ss_pred             CCCC-HHHHHHHHHH
Confidence            9996 9999999863

>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}

Probab=100.00  E-value=3.2e-41  Score=318.85  Aligned_cols=290  Identities=34%  Similarity=0.602  Sum_probs=209.8

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcCCCcEEEECCCCCCC
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTPIG  129 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~~~~  129 (355)
                      +|+|||||||||||++|++.|++.||+|++++|+..+...          ...|+.  +.+.++++++|+|||+|+....
T Consensus       147 ~m~VLVTGatG~IG~~l~~~L~~~G~~V~~l~R~~~~~~~----------v~~d~~--~~~~~~l~~~D~Vih~A~~~~~  214 (516)
T 3oh8_A          147 PLTVAITGSRGLVGRALTAQLQTGGHEVIQLVRKEPKPGK----------RFWDPL--NPASDLLDGADVLVHLAGEPIF  214 (516)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSSCCTTC----------EECCTT--SCCTTTTTTCSEEEECCCC---
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCccc----------eeeccc--chhHHhcCCCCEEEECCCCccc
Confidence            5899999999999999999999999999999998765321          123443  3456677899999999997544


Q ss_pred             CCCChhhHHHHHHHhhhhHHHHHHH-HHcCCCCCCcEEEEeeeeeeeeC-CCCCccccCCCCCCChhHHHHHHHHHHH-H
Q 018503          130 TRWSSEIKKEIKESRIRVTSKVVDL-INESPEGVRPSVLVSATALGYYG-TSETEVFDESSPSGNDYLAEVCREWEGT-A  206 (355)
Q Consensus       130 ~~~~~~~~~~~~~~n~~~~~~l~~a-~~~~~~~~~~~v~~Ss~~~~~yg-~~~~~~~~e~~~~~~~y~~k~~~~~~~~-~  206 (355)
                      ..+....+..++++|+.++.+|+++ ++.  .++++|||+||.++  || .....+++|+.+....++.+.+.+.+.. .
T Consensus       215 ~~~~~~~~~~~~~~Nv~gt~~ll~a~a~~--~~~~r~V~~SS~~v--yg~~~~~~~~~E~~~~~~~~y~~~~~~~E~~~~  290 (516)
T 3oh8_A          215 GRFNDSHKEAIRESRVLPTKFLAELVAES--TQCTTMISASAVGF--YGHDRGDEILTEESESGDDFLAEVCRDWEHATA  290 (516)
T ss_dssp             --CCGGGHHHHHHHTHHHHHHHHHHHHHC--SSCCEEEEEEEGGG--GCSEEEEEEECTTSCCCSSHHHHHHHHHHHTTH
T ss_pred             cccchhHHHHHHHHHHHHHHHHHHHHHhc--CCCCEEEEeCcceE--ecCCCCCCccCCCCCCCcChHHHHHHHHHHHHH
Confidence            4667778889999999999999999 566  68899999999998  98 5556678888876544445444443322 2


Q ss_pred             hccCCCCeEEEEEecEEEeCCCCcccchHHHHHHHhCCCCCCCCcceecccHHHHHHHHHHHHhCCCCCCceEecCCCcc
Q 018503          207 LKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRGVINGTAPNPV  286 (355)
Q Consensus       207 ~~~~~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~~~~~~i~~~~~~  286 (355)
                      .....|++++++||+++||++.+....+...+.......++++++.+++||++|+|++++.++.++...|+||+++++++
T Consensus       291 ~~~~~gi~~~ilRp~~v~Gp~~~~~~~~~~~~~~g~~~~~g~g~~~~~~i~v~Dva~ai~~~l~~~~~~g~~ni~~~~~~  370 (516)
T 3oh8_A          291 PASDAGKRVAFIRTGVALSGRGGMLPLLKTLFSTGLGGKFGDGTSWFSWIAIDDLTDIYYRAIVDAQISGPINAVAPNPV  370 (516)
T ss_dssp             HHHHTTCEEEEEEECEEEBTTBSHHHHHHHTTC---CCCCTTSCCEECEEEHHHHHHHHHHHHHCTTCCEEEEESCSCCE
T ss_pred             HHHhCCCCEEEEEeeEEECCCCChHHHHHHHHHhCCCcccCCCCceEceEeHHHHHHHHHHHHhCcccCCcEEEECCCCC
Confidence            22346999999999999999854332222222222233457889999999999999999999998877789999999999


Q ss_pred             CHHHHHHHHHHHhCCCCCCCCcHHHHHHHhccc--ceeeecCccccchhHHhCCCCCCccCHHHHHHHHhC
Q 018503          287 RLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEG--AFVVLEGQRVVPARAKELGFPFKYRYVKDALKAIMS  355 (355)
Q Consensus       287 s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~k~~~lG~~p~~~~~~~~l~~~~~  355 (355)
                      |+.|+++.+++.+|++..+++|.+..+...++.  ......+.+++++|++++||+|++++++++|+++++
T Consensus       371 s~~el~~~i~~~~g~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~~~~~kl~~lG~~~~~~~l~e~l~~~l~  441 (516)
T 3oh8_A          371 SNADMTKILATSMHRPAFIQIPSLGPKILLGSQGAEELALASQRTAPAALENLSHTFRYTDIGAAIAHELG  441 (516)
T ss_dssp             EHHHHHHHTTC---------------------CCGGGGGGCEEEECCHHHHHTTCCCSCSSHHHHHHHHHT
T ss_pred             CHHHHHHHHHHHhCCCCCCCCCHHHHHHHhCCchhHHHhhcCCeechHHHHHCCCCCCCCCHHHHHHHHhC
Confidence            999999999999998876778877776656655  455667788899999999999999889999999874

>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*

Probab=100.00  E-value=1.3e-40  Score=295.71  Aligned_cols=289  Identities=21%  Similarity=0.243  Sum_probs=218.8

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcCCCcEEEECCCCCCCC
Q 018503           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTPIGT  130 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~~~~~  130 (355)
                      |+|||||||||||++|+++|+++|++|++++|+............  .....|+.|.+ +.+++++ |+|||+|+.. ..
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~--~~~~~Dl~d~~-~~~~~~~-d~vih~A~~~-~~   75 (312)
T 3ko8_A            1 MRIVVTGGAGFIGSHLVDKLVELGYEVVVVDNLSSGRREFVNPSA--ELHVRDLKDYS-WGAGIKG-DVVFHFAANP-EV   75 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSCCGGGSCTTS--EEECCCTTSTT-TTTTCCC-SEEEECCSSC-SS
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCCchhhcCCCc--eEEECccccHH-HHhhcCC-CEEEECCCCC-Cc
Confidence            689999999999999999999999999999998765443322111  13457888888 8888888 9999999964 23


Q ss_pred             CCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCCCCccccCCCCC--CChh-HHHHHHHHHHHHh
Q 018503          131 RWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPS--GNDY-LAEVCREWEGTAL  207 (355)
Q Consensus       131 ~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~--~~~y-~~k~~~~~~~~~~  207 (355)
                      .....++...+++|+.++.++++++++  .++++|||+||.++  ||.....+++|+.+.  ...| .+|...|.....+
T Consensus        76 ~~~~~~~~~~~~~n~~~~~~l~~a~~~--~~~~~iv~~SS~~v--yg~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~  151 (312)
T 3ko8_A           76 RLSTTEPIVHFNENVVATFNVLEWARQ--TGVRTVVFASSSTV--YGDADVIPTPEEEPYKPISVYGAAKAAGEVMCATY  151 (312)
T ss_dssp             SGGGSCHHHHHHHHHHHHHHHHHHHHH--HTCCEEEEEEEGGG--GCSCSSSSBCTTSCCCCCSHHHHHHHHHHHHHHHH
T ss_pred             hhhhhCHHHHHHHHHHHHHHHHHHHHH--cCCCEEEEeCcHHH--hCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHH
Confidence            445566788899999999999999998  68899999999999  998777888887764  4567 7888888877777


Q ss_pred             ccCCCCeEEEEEecEEEeCCCCcccchHHHH-HHHhC-CC---CCCCCcceecccHHHHHHHHHHHHhC----CCCCCce
Q 018503          208 KVNKDVRLALIRIGIVLGKDGGALAKMIPLF-MMFAG-GP---LGSGQQWFSWIHLDDIVNLIYEALSN----PSYRGVI  278 (355)
Q Consensus       208 ~~~~~~~~~i~Rp~~i~G~~~~~~~~~~~~~-~~~~~-~~---~~~~~~~~~~i~v~Dva~~~~~~~~~----~~~~~~~  278 (355)
                      ..+.+++++++||+++||++.... .+...+ ....+ .+   ++++++.++++|++|+|++++.++++    ...+++|
T Consensus       152 ~~~~g~~~~~lrp~~v~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~  230 (312)
T 3ko8_A          152 ARLFGVRCLAVRYANVVGPRLRHG-VIYDFIMKLRRNPNVLEVLGDGTQRKSYLYVRDAVEATLAAWKKFEEMDAPFLAL  230 (312)
T ss_dssp             HHHHCCEEEEEEECEEECTTCCSS-HHHHHHHHHHHCTTEEEEC----CEECEEEHHHHHHHHHHHHHHHHHSCCSEEEE
T ss_pred             HHHhCCCEEEEeeccccCcCCCCC-hHHHHHHHHHhCCCCeEEcCCCCeEEeeEEHHHHHHHHHHHHHhccccCCCCcEE
Confidence            766799999999999999975431 111222 33333 22   36788999999999999999999987    3356699


Q ss_pred             EecCCCccCHHHHHHHHHHHhCCCCCCCC-cHHHHHH-HhcccceeeecCccccchhH-HhCCCCCCccCHHHHHHHHhC
Q 018503          279 NGTAPNPVRLAEMCDHLGNVLGRPSWLPV-PEFALKA-VLGEGAFVVLEGQRVVPARA-KELGFPFKYRYVKDALKAIMS  355 (355)
Q Consensus       279 ~i~~~~~~s~~el~~~i~~~~g~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~k~-~~lG~~p~~~~~~~~l~~~~~  355 (355)
                      |+++++++|+.|+++.+.+.+|.++.+.. |...... ...+     .....++++|+ +.|||+|+++ ++++|+++++
T Consensus       231 ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~-----~~~~~~d~~k~~~~lG~~p~~~-~~~~l~~~~~  304 (312)
T 3ko8_A          231 NVGNVDAVRVLDIAQIVAEVLGLRPEIRLVPSTPDGRGWPGD-----VKYMTLAVTKLMKLTGWRPTMT-SAEAVKKTAE  304 (312)
T ss_dssp             EESCSSCEEHHHHHHHHHHHHTCCCEEEEC----------CC-----CSEECBCCHHHHHHHCCCCSSC-HHHHHHHHHH
T ss_pred             EEcCCCceeHHHHHHHHHHHhCCCCceeecCccccccCCCCC-----ccccccCHHHHHHHhCCCCCCC-HHHHHHHHHH
Confidence            99999999999999999999998754322 2221111 1112     12345777888 5699999996 9999999863

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}

Probab=100.00  E-value=6.3e-41  Score=294.16  Aligned_cols=266  Identities=18%  Similarity=0.181  Sum_probs=209.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcCC-CcEEEECCCCC
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQG-STAVVNLAGTP  127 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~-~d~vi~~a~~~  127 (355)
                      ++|+||||| +||||++|+++|+++|++|++++|+.+...   ...   ....+|+.|.+.+.+++++ +|+|||+|+..
T Consensus         2 ~~~~ilVtG-aG~iG~~l~~~L~~~g~~V~~~~r~~~~~~---~~~---~~~~~Dl~d~~~~~~~~~~~~d~vih~a~~~   74 (286)
T 3gpi_A            2 SLSKILIAG-CGDLGLELARRLTAQGHEVTGLRRSAQPMP---AGV---QTLIADVTRPDTLASIVHLRPEILVYCVAAS   74 (286)
T ss_dssp             CCCCEEEEC-CSHHHHHHHHHHHHTTCCEEEEECTTSCCC---TTC---CEEECCTTCGGGCTTGGGGCCSEEEECHHHH
T ss_pred             CCCcEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCccccc---cCC---ceEEccCCChHHHHHhhcCCCCEEEEeCCCC
Confidence            357999999 599999999999999999999999876532   111   1445799999999999987 99999999852


Q ss_pred             CCCCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCCCCccccCCCCCC--Chh-HHHHHHHHHH
Q 018503          128 IGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSG--NDY-LAEVCREWEG  204 (355)
Q Consensus       128 ~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~--~~y-~~k~~~~~~~  204 (355)
                            ..++...+++|+.++.++++++++  .++++|||+||.++  ||...+.+++|+++..  ..| .+|...|.. 
T Consensus        75 ------~~~~~~~~~~n~~~~~~ll~a~~~--~~~~~~v~~SS~~v--yg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~-  143 (286)
T 3gpi_A           75 ------EYSDEHYRLSYVEGLRNTLSALEG--APLQHVFFVSSTGV--YGQEVEEWLDEDTPPIAKDFSGKRMLEAEAL-  143 (286)
T ss_dssp             ------HHC-----CCSHHHHHHHHHHTTT--SCCCEEEEEEEGGG--CCCCCSSEECTTSCCCCCSHHHHHHHHHHHH-
T ss_pred             ------CCCHHHHHHHHHHHHHHHHHHHhh--CCCCEEEEEcccEE--EcCCCCCCCCCCCCCCCCChhhHHHHHHHHH-
Confidence                  244567888999999999999998  78899999999998  9988888889988764  355 556555544 


Q ss_pred             HHhccCCCCeEEEEEecEEEeCCCCcccchHHHHHHHhCCCCCCCCcceecccHHHHHHHHHHHHhC---CCCCCceEec
Q 018503          205 TALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSN---PSYRGVINGT  281 (355)
Q Consensus       205 ~~~~~~~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~---~~~~~~~~i~  281 (355)
                        ..  . ++++++||+++||+....   ++..+  ......+.++..++++|++|+|++++.++.+   ...+++||++
T Consensus       144 --~~--~-~~~~ilR~~~v~G~~~~~---~~~~~--~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~~~~~~~~~~~  213 (286)
T 3gpi_A          144 --LA--A-YSSTILRFSGIYGPGRLR---MIRQA--QTPEQWPARNAWTNRIHRDDGAAFIAYLIQQRSHAVPERLYIVT  213 (286)
T ss_dssp             --GG--G-SSEEEEEECEEEBTTBCH---HHHHT--TCGGGSCSSBCEECEEEHHHHHHHHHHHHHHHTTSCCCSEEEEC
T ss_pred             --Hh--c-CCeEEEecccccCCCchh---HHHHH--HhcccCCCcCceeEEEEHHHHHHHHHHHHhhhccCCCCceEEEe
Confidence              22  2 999999999999997542   22222  1111236778899999999999999999997   4567899999


Q ss_pred             CCCccCHHHHHHHHHHHhCCCCCCCCcHHHHHHHhcccceeeecCccccchhHHhCCCCCCccCHHHHHHHHh
Q 018503          282 APNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPFKYRYVKDALKAIM  354 (355)
Q Consensus       282 ~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~lG~~p~~~~~~~~l~~~~  354 (355)
                      +++++|+.|+++.+++.+|.+..+..+.            ....+..++++|++++||+|++++++++|++++
T Consensus       214 ~~~~~s~~e~~~~i~~~~g~~~~~~~~~------------~~~~~~~~d~~k~~~lG~~p~~~~l~e~l~~~~  274 (286)
T 3gpi_A          214 DNQPLPVHDLLRWLADRQGIAYPAGATP------------PVQGNKKLSNARLLASGYQLIYPDYVSGYGALL  274 (286)
T ss_dssp             CSCCEEHHHHHHHHHHHTTCCCCCSCCC------------CBCSSCEECCHHHHHTTCCCSSCSHHHHHHHHH
T ss_pred             CCCCCCHHHHHHHHHHHcCCCCCCCCCc------------ccCCCeEeeHHHHHHcCCCCcCCcHHHHHHHHH
Confidence            9999999999999999999875444332            123567788899999999999966999999986

>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}

Probab=100.00  E-value=6.6e-41  Score=302.03  Aligned_cols=292  Identities=20%  Similarity=0.249  Sum_probs=218.4

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHhCC--CeEEEEecCCchh--hccCCCC--CCccCCCeeecCCcchhhhcCC--CcE
Q 018503           48 ASQMTVSVTGATGFIGRRLVQRLQADN--HQVRVLTRSRSKA--ELIFPGK--KTRFFPGVMIAEEPQWRDCIQG--STA  119 (355)
Q Consensus        48 ~~~~~IlVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~--~~~~~~~--~~~~~~~~d~~~~~~~~~~~~~--~d~  119 (355)
                      +++|+|||||||||||++|+++|+++|  ++|++++|.....  ..+....  .......+|+.|.+.+.+++++  +|+
T Consensus        22 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~  101 (346)
T 4egb_A           22 SNAMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGNLNNVKSIQDHPNYYFVKGEIQNGELLEHVIKERDVQV  101 (346)
T ss_dssp             --CEEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHHTCCE
T ss_pred             cCCCeEEEECCccHHHHHHHHHHHhhCCCcEEEEEeccccccchhhhhhhccCCCeEEEEcCCCCHHHHHHHHhhcCCCE
Confidence            445799999999999999999999999  7888888865321  1111110  0011335688899999999986  999


Q ss_pred             EEECCCCCCCCCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCC-CCccccCCCCCC--Chh-H
Q 018503          120 VVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTS-ETEVFDESSPSG--NDY-L  195 (355)
Q Consensus       120 vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~-~~~~~~e~~~~~--~~y-~  195 (355)
                      |||+|+.... ......+...+++|+.++.++++++++  .++++|||+||.++  ||.. ...+++|+++..  ..| .
T Consensus       102 Vih~A~~~~~-~~~~~~~~~~~~~nv~~~~~ll~a~~~--~~~~~~v~~SS~~v--y~~~~~~~~~~E~~~~~p~~~Y~~  176 (346)
T 4egb_A          102 IVNFAAESHV-DRSIENPIPFYDTNVIGTVTLLELVKK--YPHIKLVQVSTDEV--YGSLGKTGRFTEETPLAPNSPYSS  176 (346)
T ss_dssp             EEECCCCC----------CHHHHHHTHHHHHHHHHHHH--STTSEEEEEEEGGG--GCCCCSSCCBCTTSCCCCCSHHHH
T ss_pred             EEECCcccch-hhhhhCHHHHHHHHHHHHHHHHHHHHh--cCCCEEEEeCchHH--hCCCCcCCCcCCCCCCCCCChhHH
Confidence            9999997532 223455678899999999999999999  78899999999998  9865 456788887754  557 7


Q ss_pred             HHHHHHHHHHHhccCCCCeEEEEEecEEEeCCCCcccchHHHH--HHHhCCCC---CCCCcceecccHHHHHHHHHHHHh
Q 018503          196 AEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLF--MMFAGGPL---GSGQQWFSWIHLDDIVNLIYEALS  270 (355)
Q Consensus       196 ~k~~~~~~~~~~~~~~~~~~~i~Rp~~i~G~~~~~~~~~~~~~--~~~~~~~~---~~~~~~~~~i~v~Dva~~~~~~~~  270 (355)
                      +|...|.....+..+.+++++++||+++||++.... .+++.+  ....+.++   ++++..++++|++|+|++++.++.
T Consensus       177 sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~  255 (346)
T 4egb_A          177 SKASADMIALAYYKTYQLPVIVTRCSNNYGPYQYPE-KLIPLMVTNALEGKKLPLYGDGLNVRDWLHVTDHCSAIDVVLH  255 (346)
T ss_dssp             HHHHHHHHHHHHHHHHCCCEEEEEECEEESTTCCTT-SHHHHHHHHHHTTCCCEEETTSCCEECEEEHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhCCCEEEEeecceeCcCCCcc-chHHHHHHHHHcCCCceeeCCCCeEEeeEEHHHHHHHHHHHHh
Confidence            788888877777766799999999999999976432 233322  34455543   778899999999999999999999


Q ss_pred             CCCCCCceEecCCCccCHHHHHHHHHHHhCCCCC-CCCcHHHHHHHhcccceeeecCccccchhHH-hCCCCCCccCHHH
Q 018503          271 NPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSW-LPVPEFALKAVLGEGAFVVLEGQRVVPARAK-ELGFPFKYRYVKD  348 (355)
Q Consensus       271 ~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~-~lG~~p~~~~~~~  348 (355)
                      .+..+++||+++++++|+.|+++.+.+.+|.+.. +......    .+     ......++++|++ .|||+|+++ +++
T Consensus       256 ~~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~----~~-----~~~~~~~d~~k~~~~lG~~p~~~-~~e  325 (346)
T 4egb_A          256 KGRVGEVYNIGGNNEKTNVEVVEQIITLLGKTKKDIEYVTDR----LG-----HDRRYAINAEKMKNEFDWEPKYT-FEQ  325 (346)
T ss_dssp             HCCTTCEEEECCSCCEEHHHHHHHHHHHHTCCGGGCEEECC------C-----CCSCCCBCCHHHHHHHCCCCCCC-HHH
T ss_pred             cCCCCCEEEECCCCceeHHHHHHHHHHHhCCCcccccccCCC----CC-----CcceeeccHHHHHHHcCCCCCCC-HHH
Confidence            8776779999999999999999999999998632 2111100    01     1133457788886 599999996 999


Q ss_pred             HHHHHhC
Q 018503          349 ALKAIMS  355 (355)
Q Consensus       349 ~l~~~~~  355 (355)
                      +|+++++
T Consensus       326 ~l~~~~~  332 (346)
T 4egb_A          326 GLQETVQ  332 (346)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            9999863

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}

Probab=100.00  E-value=1.9e-41  Score=308.61  Aligned_cols=298  Identities=15%  Similarity=0.195  Sum_probs=222.5

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHhC-CCeEEEEecCCchhhccCCCCCCccCCCeeec-CCcchhhhcCCCcEEEECCC
Q 018503           48 ASQMTVSVTGATGFIGRRLVQRLQAD-NHQVRVLTRSRSKAELIFPGKKTRFFPGVMIA-EEPQWRDCIQGSTAVVNLAG  125 (355)
Q Consensus        48 ~~~~~IlVtGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~-~~~~~~~~~~~~d~vi~~a~  125 (355)
                      +++|+|||||||||||++|+++|+++ ||+|++++|+.+....+..... .....+|+. |.+.+.++++++|+|||+|+
T Consensus        22 m~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~-v~~~~~Dl~~d~~~~~~~~~~~d~Vih~A~  100 (372)
T 3slg_A           22 MKAKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLVKHER-MHFFEGDITINKEWVEYHVKKCDVILPLVA  100 (372)
T ss_dssp             -CCCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCCTTTGGGGGSTT-EEEEECCTTTCHHHHHHHHHHCSEEEECBC
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCChhhhhhhccCCC-eEEEeCccCCCHHHHHHHhccCCEEEEcCc
Confidence            45689999999999999999999998 9999999998876544332111 013457888 88899999999999999999


Q ss_pred             CCCCCCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCCCCccccCCCCC---------CChh-H
Q 018503          126 TPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPS---------GNDY-L  195 (355)
Q Consensus       126 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~---------~~~y-~  195 (355)
                      .... .....++...+++|+.++.++++++++  .+ ++|||+||.++  ||...+.+++|++++         ...| .
T Consensus       101 ~~~~-~~~~~~~~~~~~~nv~~~~~ll~a~~~--~~-~~~v~~SS~~v--yg~~~~~~~~e~~~~~~~~p~~~p~~~Y~~  174 (372)
T 3slg_A          101 IATP-ATYVKQPLRVFELDFEANLPIVRSAVK--YG-KHLVFPSTSEV--YGMCADEQFDPDASALTYGPINKPRWIYAC  174 (372)
T ss_dssp             CCCH-HHHHHCHHHHHHHHTTTTHHHHHHHHH--HT-CEEEEECCGGG--GBSCCCSSBCTTTCCEEECCTTCTTHHHHH
T ss_pred             cccH-HHHhhCHHHHHHHHHHHHHHHHHHHHH--hC-CcEEEeCcHHH--hCCCCCCCCCccccccccCCCCCCCCcHHH
Confidence            7422 112345678889999999999999998  56 89999999998  998777777777643         2357 7


Q ss_pred             HHHHHHHHHHHhccCCCCeEEEEEecEEEeCCCCc-------ccchHHHH--HHHhCCCC---CCCCcceecccHHHHHH
Q 018503          196 AEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGA-------LAKMIPLF--MMFAGGPL---GSGQQWFSWIHLDDIVN  263 (355)
Q Consensus       196 ~k~~~~~~~~~~~~~~~~~~~i~Rp~~i~G~~~~~-------~~~~~~~~--~~~~~~~~---~~~~~~~~~i~v~Dva~  263 (355)
                      +|...|.....+... +++++++||+++||++...       ...++..+  ....+.++   +++++.++++|++|+|+
T Consensus       175 sK~~~E~~~~~~~~~-g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~  253 (372)
T 3slg_A          175 SKQLMDRVIWGYGME-GLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGENISLVDGGSQKRAFTYVDDGIS  253 (372)
T ss_dssp             HHHHHHHHHHHHHTT-TCEEEEEEECSEECSSCCCTTCSBSCSCHHHHHHHHHHHHTCCEEEGGGGCCEEECEEHHHHHH
T ss_pred             HHHHHHHHHHHHHHC-CCCEEEEccccccCCCcccccccccccchHHHHHHHHHHcCCCcEEeCCCceEEEEEEHHHHHH
Confidence            888888888777766 9999999999999997532       12233333  44455554   66789999999999999


Q ss_pred             HHHHHHhCCC---CCCceEecC-CCccCHHHHHHHHHHHhCCCCCCCCcHHHHH-------HHhcccceeeecCccccch
Q 018503          264 LIYEALSNPS---YRGVINGTA-PNPVRLAEMCDHLGNVLGRPSWLPVPEFALK-------AVLGEGAFVVLEGQRVVPA  332 (355)
Q Consensus       264 ~~~~~~~~~~---~~~~~~i~~-~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~  332 (355)
                      +++.+++++.   .+++||+++ ++++|+.|+++.+.+.+|++..+........       ...+ ..........++++
T Consensus       254 a~~~~~~~~~~~~~~~~~ni~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~d~~  332 (372)
T 3slg_A          254 ALMKIIENSNGVATGKIYNIGNPNNNFSVRELANKMLELAAEFPEYADSAKRVKLVETTSGAYYG-NGYQDVQNRVPKIE  332 (372)
T ss_dssp             HHHHHHHCGGGTTTTEEEEECCTTCEEEHHHHHHHHHHHHHHCTTTHHHHHTCCEEEC--------------CCCCBCCH
T ss_pred             HHHHHHhcccCcCCCceEEeCCCCCCccHHHHHHHHHHHhCCCcccccccccceeeecccccccc-CCccccceeecCHH
Confidence            9999999863   567999999 4899999999999999997632211110000       0000 00012234566788


Q ss_pred             hHHh-CCCCCCccCHHHHHHHHhC
Q 018503          333 RAKE-LGFPFKYRYVKDALKAIMS  355 (355)
Q Consensus       333 k~~~-lG~~p~~~~~~~~l~~~~~  355 (355)
                      |+++ |||+|+++ ++++|+++++
T Consensus       333 k~~~~lG~~p~~~-l~e~l~~~~~  355 (372)
T 3slg_A          333 NTMQELGWAPQFT-FDDALRQIFE  355 (372)
T ss_dssp             HHHHHHTCCCCCC-HHHHHHHHHH
T ss_pred             HHHHHcCCCCCCC-HHHHHHHHHH
Confidence            8865 99999996 9999999863

>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*

Probab=100.00  E-value=1.5e-40  Score=299.88  Aligned_cols=278  Identities=21%  Similarity=0.251  Sum_probs=220.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcCCCcEEEECCCCCC
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTPI  128 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~~~  128 (355)
                      .+|+|||||||||||++|++.|+++|++|++++|+...     ...   ....+|+.|.+.+.++++++|+|||+|+.. 
T Consensus        18 ~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-----~~~---~~~~~Dl~d~~~~~~~~~~~d~vih~A~~~-   88 (347)
T 4id9_A           18 GSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPSG-----TGG---EEVVGSLEDGQALSDAIMGVSAVLHLGAFM-   88 (347)
T ss_dssp             ---CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCCS-----SCC---SEEESCTTCHHHHHHHHTTCSEEEECCCCC-
T ss_pred             CCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCC-----CCc---cEEecCcCCHHHHHHHHhCCCEEEECCccc-
Confidence            45799999999999999999999999999999998765     111   144579999999999999999999999964 


Q ss_pred             CCCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCC--CCCccccCCCCC--CChh-HHHHHHHHH
Q 018503          129 GTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGT--SETEVFDESSPS--GNDY-LAEVCREWE  203 (355)
Q Consensus       129 ~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~--~~~~~~~e~~~~--~~~y-~~k~~~~~~  203 (355)
                        ..........+++|+.++.++++++++  .++++|||+||.++  ||.  ....+++|+++.  ...| .+|...|..
T Consensus        89 --~~~~~~~~~~~~~nv~~~~~ll~a~~~--~~~~~~V~~SS~~v--yg~~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~~  162 (347)
T 4id9_A           89 --SWAPADRDRMFAVNVEGTRRLLDAASA--AGVRRFVFASSGEV--YPENRPEFLPVTEDHPLCPNSPYGLTKLLGEEL  162 (347)
T ss_dssp             --CSSGGGHHHHHHHHTHHHHHHHHHHHH--TTCSEEEEEEEGGG--TTTTSCSSSSBCTTSCCCCCSHHHHHHHHHHHH
T ss_pred             --CcchhhHHHHHHHHHHHHHHHHHHHHH--cCCCeEEEECCHHH--hCCCCCCCCCcCCCCCCCCCChHHHHHHHHHHH
Confidence              233444578999999999999999999  78999999999999  987  566678888764  4567 788888888


Q ss_pred             HHHhccCCCCeEEEEEecEEE-------------eCCCCcc----------cchHHHH--HHHhCCCC---CCCCcceec
Q 018503          204 GTALKVNKDVRLALIRIGIVL-------------GKDGGAL----------AKMIPLF--MMFAGGPL---GSGQQWFSW  255 (355)
Q Consensus       204 ~~~~~~~~~~~~~i~Rp~~i~-------------G~~~~~~----------~~~~~~~--~~~~~~~~---~~~~~~~~~  255 (355)
                      ...+..+.+++++++||+++|             |++....          ..++..+  ....+.++   ++++..++|
T Consensus       163 ~~~~~~~~~~~~~ilRp~~v~~~~~~~~~~~~~~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~  242 (347)
T 4id9_A          163 VRFHQRSGAMETVILRFSHTQDATELLDEDSFFSGPRFFLRPRIHQQQNFGNAAIAELLQSRDIGEPSHILARNENGRPF  242 (347)
T ss_dssp             HHHHHHHSSSEEEEEEECEEECGGGTTCTTSSSHHHHHBHHHHHHHHHHHTCHHHHHHHHHHCCSSCCEEEEECTTCCBC
T ss_pred             HHHHHHhcCCceEEEccceEeecccccccccccCCCCcccccccccccccchhHHHHHHHHHHcCCCeEEeCCCCcccCC
Confidence            877777779999999999999             7653221          2233322  33344443   567788899


Q ss_pred             ----ccHHHHHHHHHHHHhCC-CCCCceEecCCCccCHHHHHHHHHHHhCCCCCC-CCcHHHHHHHhcccceeeecCccc
Q 018503          256 ----IHLDDIVNLIYEALSNP-SYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWL-PVPEFALKAVLGEGAFVVLEGQRV  329 (355)
Q Consensus       256 ----i~v~Dva~~~~~~~~~~-~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~  329 (355)
                          +|++|+|++++.++.++ ..+++||+++++++|+.|+++.+++.+|.+..+ ..|...             ....+
T Consensus       243 ~~~~i~v~Dva~ai~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~p~~~-------------~~~~~  309 (347)
T 4id9_A          243 RMHITDTRDMVAGILLALDHPEAAGGTFNLGADEPADFAALLPKIAALTGLPIVTVDFPGDG-------------VYYHT  309 (347)
T ss_dssp             EECEEEHHHHHHHHHHHHHCGGGTTEEEEESCSSCEEHHHHHHHHHHHHCCCEEEEECSSCC-------------CBCCB
T ss_pred             ccCcEeHHHHHHHHHHHhcCcccCCCeEEECCCCcccHHHHHHHHHHHhCCCCceeeCCCcc-------------ccccc
Confidence                99999999999999987 356799999999999999999999999987322 222211             15567


Q ss_pred             cchhHHh-CCCCCCccCHHHHHHHHhC
Q 018503          330 VPARAKE-LGFPFKYRYVKDALKAIMS  355 (355)
Q Consensus       330 ~~~k~~~-lG~~p~~~~~~~~l~~~~~  355 (355)
                      +++|+++ |||+|+++ ++++|+++++
T Consensus       310 d~~k~~~~lG~~p~~~-~~~~l~~~~~  335 (347)
T 4id9_A          310 SNERIRNTLGFEAEWT-MDRMLEEAAT  335 (347)
T ss_dssp             CCHHHHHHHCCCCCCC-HHHHHHHHHH
T ss_pred             CHHHHHHHhCCCCCCC-HHHHHHHHHH
Confidence            8888865 99999996 9999999863

>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=100.00  E-value=9.1e-40  Score=293.99  Aligned_cols=292  Identities=19%  Similarity=0.202  Sum_probs=220.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCC-----CCCccCCCeeecCCcchhhhcC--CCcEEE
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-----KKTRFFPGVMIAEEPQWRDCIQ--GSTAVV  121 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-----~~~~~~~~~d~~~~~~~~~~~~--~~d~vi  121 (355)
                      ++|+||||||+||||++|+++|+++|++|++++|+..........     ........+|+.|++++.++++  ++|+||
T Consensus         4 ~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vi   83 (341)
T 3enk_A            4 TKGTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIARIEKITGKTPAFHETDVSDERALARIFDAHPITAAI   83 (341)
T ss_dssp             SSCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSSCTHHHHHHHHHHSCCCEEECCCTTCHHHHHHHHHHSCCCEEE
T ss_pred             CCcEEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCcchHHHHHHHHhhcCCCceEEEeecCCHHHHHHHHhccCCcEEE
Confidence            457999999999999999999999999999999987654321100     0000134579999999999987  899999


Q ss_pred             ECCCCCCCCCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCCCCccccCCCCC--CChh-HHHH
Q 018503          122 NLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPS--GNDY-LAEV  198 (355)
Q Consensus       122 ~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~--~~~y-~~k~  198 (355)
                      |+|+.... ......+...++.|+.++.++++++++  .++++|||+||.++  ||.....+++|+.+.  ...| .+|.
T Consensus        84 h~A~~~~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~--~~~~~iv~~SS~~~--~g~~~~~~~~e~~~~~~~~~Y~~sK~  158 (341)
T 3enk_A           84 HFAALKAV-GESVAKPIEYYRNNLDSLLSLLRVMRE--RAVKRIVFSSSATV--YGVPERSPIDETFPLSATNPYGQTKL  158 (341)
T ss_dssp             ECCCCCCH-HHHHHCHHHHHHHHHHHHHHHHHHHHH--TTCCEEEEEEEGGG--BCSCSSSSBCTTSCCBCSSHHHHHHH
T ss_pred             ECcccccc-CccccChHHHHHHHHHHHHHHHHHHHh--CCCCEEEEEecceE--ecCCCCCCCCCCCCCCCCChhHHHHH
Confidence            99997421 112344567889999999999999999  68889999999998  998777788888774  3567 7888


Q ss_pred             HHHHHHHHhccCCC-CeEEEEEecEEEeCCCCc---------ccchHHHH-HHHhC--CCC---C------CCCcceecc
Q 018503          199 CREWEGTALKVNKD-VRLALIRIGIVLGKDGGA---------LAKMIPLF-MMFAG--GPL---G------SGQQWFSWI  256 (355)
Q Consensus       199 ~~~~~~~~~~~~~~-~~~~i~Rp~~i~G~~~~~---------~~~~~~~~-~~~~~--~~~---~------~~~~~~~~i  256 (355)
                      ..|.....+..+.+ ++++++||+++||+....         ...+++.+ ....+  .++   +      ++++.++|+
T Consensus       159 ~~e~~~~~~~~~~~~~~~~~lRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~i  238 (341)
T 3enk_A          159 MAEQILRDVEAADPSWRVATLRYFNPVGAHESGLIGEDPAGIPNNLMPYVAQVAVGKLEKLRVFGSDYPTPDGTGVRDYI  238 (341)
T ss_dssp             HHHHHHHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCSSHHHHHHHHHHTSSSCEEEECSCSSSTTSSCEECEE
T ss_pred             HHHHHHHHHhhcCCCceEEEEeeccccCCccccccCCCcccCccchHHHHHHHHhcCCCceEEeCCccCCCCCCeeEeeE
Confidence            88887777666554 999999999999985411         12344433 22333  222   3      788999999


Q ss_pred             cHHHHHHHHHHHHhC---CCCCCceEecCCCccCHHHHHHHHHHHhCCCCCCCCcHHHHHHHhcccceeeecCccccchh
Q 018503          257 HLDDIVNLIYEALSN---PSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPAR  333 (355)
Q Consensus       257 ~v~Dva~~~~~~~~~---~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k  333 (355)
                      |++|+|++++.++..   ...+++||+++++++|+.|+++.+++.+|++..+.....    ...+.     ....++++|
T Consensus       239 ~v~Dva~a~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~----~~~~~-----~~~~~d~~k  309 (341)
T 3enk_A          239 HVVDLARGHIAALDALERRDASLTVNLGTGRGYSVLEVVRAFEKASGRAVPYELVAR----RPGDV-----AECYANPAA  309 (341)
T ss_dssp             EHHHHHHHHHHHHHHHHHHTSCEEEEESCSCCEEHHHHHHHHHHHHCSCCCEEEECC----CTTCC-----SEECBCCHH
T ss_pred             EHHHHHHHHHHHHHhhhcCCcceEEEeCCCCceeHHHHHHHHHHHhCCCcceeeCCC----CCCCc-----cccccCHHH
Confidence            999999999999986   235679999999999999999999999998743321110    01111     234567788


Q ss_pred             HH-hCCCCCCccCHHHHHHHHhC
Q 018503          334 AK-ELGFPFKYRYVKDALKAIMS  355 (355)
Q Consensus       334 ~~-~lG~~p~~~~~~~~l~~~~~  355 (355)
                      ++ +|||+|+++ ++++|+++++
T Consensus       310 ~~~~lG~~p~~~-l~~~l~~~~~  331 (341)
T 3enk_A          310 AAETIGWKAERD-LERMCADHWR  331 (341)
T ss_dssp             HHHHHCCCCCCC-HHHHHHHHHH
T ss_pred             HHHHcCCCCCCC-HHHHHHHHHH
Confidence            85 599999996 9999999863

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}

Probab=100.00  E-value=3.6e-39  Score=292.42  Aligned_cols=283  Identities=15%  Similarity=0.147  Sum_probs=216.7

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHh--CCCeEEEEecCCchh-------------hccCCCCCCccCCCeeecCCcchhh
Q 018503           48 ASQMTVSVTGATGFIGRRLVQRLQA--DNHQVRVLTRSRSKA-------------ELIFPGKKTRFFPGVMIAEEPQWRD  112 (355)
Q Consensus        48 ~~~~~IlVtGatG~iG~~l~~~L~~--~g~~V~~~~r~~~~~-------------~~~~~~~~~~~~~~~d~~~~~~~~~  112 (355)
                      +++|+|||||||||||++|+++|++  .|++|++++|+....             .......  .....+|+.|++.+.+
T Consensus         8 ~~~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~Dl~d~~~~~~   85 (362)
T 3sxp_A            8 LENQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFK--GEVIAADINNPLDLRR   85 (362)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEECCCCC-------CCCCCCGGGGTTCC--SEEEECCTTCHHHHHH
T ss_pred             cCCCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEECCCccccccccchhhhhhhhhccccC--ceEEECCCCCHHHHHH
Confidence            4568999999999999999999999  999999999976511             1111100  0134578889999998


Q ss_pred             h-cCCCcEEEECCCCCCCCCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCCCCccccCCCCCC
Q 018503          113 C-IQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSG  191 (355)
Q Consensus       113 ~-~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~  191 (355)
                      + ..++|+|||+|+...   .....+...+++|+.++.++++++++  .+++ |||+||.++  ||.... +++|+++..
T Consensus        86 ~~~~~~D~vih~A~~~~---~~~~~~~~~~~~Nv~gt~~ll~aa~~--~~~~-~V~~SS~~v--yg~~~~-~~~E~~~~~  156 (362)
T 3sxp_A           86 LEKLHFDYLFHQAAVSD---TTMLNQELVMKTNYQAFLNLLEIARS--KKAK-VIYASSAGV--YGNTKA-PNVVGKNES  156 (362)
T ss_dssp             HTTSCCSEEEECCCCCG---GGCCCHHHHHHHHTHHHHHHHHHHHH--TTCE-EEEEEEGGG--GCSCCS-SBCTTSCCC
T ss_pred             hhccCCCEEEECCccCC---ccccCHHHHHHHHHHHHHHHHHHHHH--cCCc-EEEeCcHHH--hCCCCC-CCCCCCCCC
Confidence            8 789999999999642   23456778999999999999999998  6776 999999988  987655 888887654


Q ss_pred             --Chh-HHHHHHHHHHHHhccCCCCeEEEEEecEEEeCCCCcc---cchHHHH--HHHhCCCC---CCCCcceecccHHH
Q 018503          192 --NDY-LAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGAL---AKMIPLF--MMFAGGPL---GSGQQWFSWIHLDD  260 (355)
Q Consensus       192 --~~y-~~k~~~~~~~~~~~~~~~~~~~i~Rp~~i~G~~~~~~---~~~~~~~--~~~~~~~~---~~~~~~~~~i~v~D  260 (355)
                        ..| .+|...|.....+..+  ++++++||+++|||+....   ..+++.+  ....+.++   +++++.++++|++|
T Consensus       157 p~~~Y~~sK~~~E~~~~~~~~~--~~~~~lR~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~D  234 (362)
T 3sxp_A          157 PENVYGFSKLCMDEFVLSHSND--NVQVGLRYFNVYGPREFYKEKTASMVLQLALGAMAFKEVKLFEFGEQLRDFVYIED  234 (362)
T ss_dssp             CSSHHHHHHHHHHHHHHHTTTT--SCEEEEEECSEESTTCGGGGGGSCHHHHHHHHHHTTSEEECSGGGCCEEECEEHHH
T ss_pred             CCChhHHHHHHHHHHHHHHhcc--CCEEEEEeCceeCcCCCCCCcchhHHHHHHHHHHhCCCeEEECCCCeEEccEEHHH
Confidence              457 7787777777766654  9999999999999986432   1333333  33445443   66788999999999


Q ss_pred             HHHHHHHHHhCCCCCCceEecCCCccCHHHHHHHHHHHhCCCCC-CCCcHHHHHHHhcccceeeecCccccchhH-HhCC
Q 018503          261 IVNLIYEALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSW-LPVPEFALKAVLGEGAFVVLEGQRVVPARA-KELG  338 (355)
Q Consensus       261 va~~~~~~~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~-~~lG  338 (355)
                      +|++++.+++.+.. |+||+++++++|+.|+++.+.+.+| +.. ...|...         ........++++|+ +.||
T Consensus       235 va~ai~~~~~~~~~-g~~~i~~~~~~s~~e~~~~i~~~~g-~~~~~~~~~~~---------~~~~~~~~~d~~k~~~~lG  303 (362)
T 3sxp_A          235 VIQANVKAMKAQKS-GVYNVGYSQARSYNEIVSILKEHLG-DFKVTYIKNPY---------AFFQKHTQAHIEPTILDLD  303 (362)
T ss_dssp             HHHHHHHHTTCSSC-EEEEESCSCEEEHHHHHHHHHHHHC-CCEEECCC----------------CCCCBCCHHHHHHHC
T ss_pred             HHHHHHHHHhcCCC-CEEEeCCCCCccHHHHHHHHHHHcC-CCceEECCCCC---------cCcccceecCHHHHHHHhC
Confidence            99999999998764 5999999999999999999999999 532 2333321         11234567888889 5699


Q ss_pred             CCCCccCHHHHHHHHhC
Q 018503          339 FPFKYRYVKDALKAIMS  355 (355)
Q Consensus       339 ~~p~~~~~~~~l~~~~~  355 (355)
                      |+|+++ ++++|+++++
T Consensus       304 ~~p~~~-l~e~l~~~~~  319 (362)
T 3sxp_A          304 YTPLYD-LESGIKDYLP  319 (362)
T ss_dssp             CCCCCC-HHHHHHHHHH
T ss_pred             CCCCCC-HHHHHHHHHH
Confidence            999996 9999999863

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*

Probab=100.00  E-value=2.6e-39  Score=294.81  Aligned_cols=290  Identities=20%  Similarity=0.261  Sum_probs=211.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCC-CeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcCCCcEEEECCCCC
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADN-HQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTP  127 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~~  127 (355)
                      .+|+|||||||||||++|+++|+++| ++|++++|+..................+|+.|++.+.++++++|+|||+|+..
T Consensus        31 ~~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~l~~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vih~A~~~  110 (377)
T 2q1s_A           31 ANTNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEKINVPDHPAVRFSETSITDDALLASLQDEYDYVFHLATYH  110 (377)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCSEEEEECCCTTCCGGGSCCCTTEEEECSCTTCHHHHHHCCSCCSEEEECCCCS
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHcCCceEEEEECCCCCchhhccCCCceEEEECCCCCHHHHHHHhhCCCEEEECCCcc
Confidence            45799999999999999999999999 99999999875432211100000133568889999999999999999999864


Q ss_pred             CCCCCChhhHHHHHHHhhhhHHHHHHHHHcCCC-CCCcEEEEeeeeeeeeCCCCCcccc--CCC------CCCChh-HHH
Q 018503          128 IGTRWSSEIKKEIKESRIRVTSKVVDLINESPE-GVRPSVLVSATALGYYGTSETEVFD--ESS------PSGNDY-LAE  197 (355)
Q Consensus       128 ~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~~~~v~~Ss~~~~~yg~~~~~~~~--e~~------~~~~~y-~~k  197 (355)
                      .. .....++...+++|+.++.++++++++  . ++++|||+||.++  ||...+.+++  |++      .+...| .+|
T Consensus       111 ~~-~~~~~~~~~~~~~nv~~~~~ll~a~~~--~~~~~~~V~~SS~~v--yg~~~~~~~~~~E~~~~~~~~~~~~~Y~~sK  185 (377)
T 2q1s_A          111 GN-QSSIHDPLADHENNTLTTLKLYERLKH--FKRLKKVVYSAAGCS--IAEKTFDDAKATEETDIVSLHNNDSPYSMSK  185 (377)
T ss_dssp             CH-HHHHHCHHHHHHHHTHHHHHHHHHHTT--CSSCCEEEEEEEC----------------CCCCCCCSSCCCSHHHHHH
T ss_pred             Cc-hhhhhCHHHHHHHHHHHHHHHHHHHHH--hCCCCeEEEeCCHHH--cCCCCCCCcCcccccccccccCCCCchHHHH
Confidence            21 112345678899999999999999998  6 7899999999988  9876666777  776      334567 788


Q ss_pred             HHHHHHHHHhccCCCCeEEEEEecEEEeCCC---------Ccc---cchHHHH--HHHhCCCC---CCCCcceecccHHH
Q 018503          198 VCREWEGTALKVNKDVRLALIRIGIVLGKDG---------GAL---AKMIPLF--MMFAGGPL---GSGQQWFSWIHLDD  260 (355)
Q Consensus       198 ~~~~~~~~~~~~~~~~~~~i~Rp~~i~G~~~---------~~~---~~~~~~~--~~~~~~~~---~~~~~~~~~i~v~D  260 (355)
                      ...|.....+..+.+++++++||+.+||+..         ...   ..+++.+  ....+.++   +++++.++++|++|
T Consensus       186 ~~~E~~~~~~~~~~gi~~~ilRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~v~D  265 (377)
T 2q1s_A          186 IFGEFYSVYYHKQHQLPTVRARFQNVYGPGEILGAGRWRGTPATVWRNVTPTFIYKALKGMPLPLENGGVATRDFIFVED  265 (377)
T ss_dssp             HHHHHHHHHHHHHHCCCEEEEEECCEECTTCCTTCSSCCSSGGGTSCSHHHHHHHHHHTTCCCCCSGGGCCEECCEEHHH
T ss_pred             HHHHHHHHHHHHHhCCCEEEEeeccEECCCCcccccccccCcccccccHHHHHHHHHHcCCCeEEeCCCCeEEeeEEHHH
Confidence            8888777766655699999999999999976         220   2333332  33455543   56778999999999


Q ss_pred             HHHH-HHHHHhCCCCCCceEecCCCccCHHHHHHHHHHHhCCCCCC-CCcHHHHHHHhcccceeeecCccccchhHH-hC
Q 018503          261 IVNL-IYEALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWL-PVPEFALKAVLGEGAFVVLEGQRVVPARAK-EL  337 (355)
Q Consensus       261 va~~-~~~~~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~-~l  337 (355)
                      +|++ ++.++..+. .|+||+++++++|+.|+++.+.+.+|.+..+ ..|..     .++.    .....++++|++ .|
T Consensus       266 va~a~i~~~~~~~~-~g~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~p~~-----~~~~----~~~~~~d~~k~~~~l  335 (377)
T 2q1s_A          266 VANGLIACAADGTP-GGVYNIASGKETSIADLATKINEITGNNTELDRLPKR-----PWDN----SGKRFGSPEKARREL  335 (377)
T ss_dssp             HHHHHHHHHHHCCT-TEEEECCCCCCEEHHHHHHHHHHHHTCCSCCCCCCCC-----GGGC----C-CCCCCCHHHHHHH
T ss_pred             HHHHHHHHHHhcCC-CCeEEecCCCceeHHHHHHHHHHHhCCCCCceeCCCC-----cccc----ccccccCHHHHHHHc
Confidence            9999 999998876 4499999999999999999999999987322 23311     1111    125667888885 59


Q ss_pred             CCCCCccCHHHHHHHHh
Q 018503          338 GFPFKYRYVKDALKAIM  354 (355)
Q Consensus       338 G~~p~~~~~~~~l~~~~  354 (355)
                      ||+|+++ ++++|++++
T Consensus       336 G~~p~~~-l~e~l~~~~  351 (377)
T 2q1s_A          336 GFSADVS-IDDGLRKTI  351 (377)
T ss_dssp             CCCCCCC-HHHHHHHHH
T ss_pred             CCCCCCC-HHHHHHHHH
Confidence            9999996 999999886

>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*

Probab=100.00  E-value=2.2e-39  Score=287.78  Aligned_cols=284  Identities=21%  Similarity=0.256  Sum_probs=215.6

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcC--CCcEEEECCCCCC
Q 018503           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ--GSTAVVNLAGTPI  128 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--~~d~vi~~a~~~~  128 (355)
                      |+||||||+||||++++++|+++|++|++++|............  .....+|+.|++++.++++  ++|+|||+|+...
T Consensus         1 m~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~--~~~~~~Dl~~~~~~~~~~~~~~~d~vi~~a~~~~   78 (311)
T 2p5y_A            1 MRVLVTGGAGFIGSHIVEDLLARGLEVAVLDNLATGKRENVPKG--VPFFRVDLRDKEGVERAFREFRPTHVSHQAAQAS   78 (311)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTTTCEEEEECCCSSCCGGGSCTT--CCEECCCTTCHHHHHHHHHHHCCSEEEECCSCCC
T ss_pred             CEEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCCcCchhhcccC--eEEEECCCCCHHHHHHHHHhcCCCEEEECccccC
Confidence            68999999999999999999999999999999543322111110  0134578999999988887  8999999998642


Q ss_pred             CCCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeee-eeeeeCC-CCCccccCCCCC--CChh-HHHHHHHHH
Q 018503          129 GTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSAT-ALGYYGT-SETEVFDESSPS--GNDY-LAEVCREWE  203 (355)
Q Consensus       129 ~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~-~~~~yg~-~~~~~~~e~~~~--~~~y-~~k~~~~~~  203 (355)
                      . .....++...+++|+.++.++++++.+  .+++++|++||. ++  ||. ....+.+|+++.  ...| .+|...|.+
T Consensus        79 ~-~~~~~~~~~~~~~N~~g~~~l~~a~~~--~~~~~iv~~SS~~~~--~g~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~  153 (311)
T 2p5y_A           79 V-KVSVEDPVLDFEVNLLGGLNLLEACRQ--YGVEKLVFASTGGAI--YGEVPEGERAEETWPPRPKSPYAASKAAFEHY  153 (311)
T ss_dssp             H-HHHHHCHHHHHHHHTHHHHHHHHHHHH--TTCSEEEEEEEHHHH--HCCCCTTCCBCTTSCCCCCSHHHHHHHHHHHH
T ss_pred             c-hhhhhCHHHHHHHHHHHHHHHHHHHHH--hCCCEEEEeCCChhh--cCCCCCCCCcCCCCCCCCCChHHHHHHHHHHH
Confidence            1 112345677899999999999999998  688999999998 77  886 445577777664  4567 788888877


Q ss_pred             HHHhccCCCCeEEEEEecEEEeCCCCcc--cchHHHH--HHHhCCC---C-----CCCCcceecccHHHHHHHHHHHHhC
Q 018503          204 GTALKVNKDVRLALIRIGIVLGKDGGAL--AKMIPLF--MMFAGGP---L-----GSGQQWFSWIHLDDIVNLIYEALSN  271 (355)
Q Consensus       204 ~~~~~~~~~~~~~i~Rp~~i~G~~~~~~--~~~~~~~--~~~~~~~---~-----~~~~~~~~~i~v~Dva~~~~~~~~~  271 (355)
                      ...+..+.+++++++||+++||++....  ..+++.+  ....+.+   +     +++++.++|+|++|+|++++.++..
T Consensus       154 ~~~~~~~~~~~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~  233 (311)
T 2p5y_A          154 LSVYGQSYGLKWVSLRYGNVYGPRQDPHGEAGVVAIFAERVLKGLPVTLYARKTPGDEGCVRDYVYVGDVAEAHALALFS  233 (311)
T ss_dssp             HHHHHHHHCCCEEEEEECEEECTTCCSSSTTHHHHHHHHHHHHTCCEEEECSSSTTSCCCEECEEEHHHHHHHHHHHHHH
T ss_pred             HHHHHHHcCCCEEEEeeccccCcCCCCCCcCcHHHHHHHHHHcCCCcEEEecccCCCCCeEEeeEEHHHHHHHHHHHHhC
Confidence            7766656699999999999999975322  1233322  2334544   2     5667889999999999999999986


Q ss_pred             CCCCCceEecCCCccCHHHHHHHHHHHhCCCCCC-CCcHHHHHHHhcccceeeecCccccchhHHhCCCCCCccCHHHHH
Q 018503          272 PSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWL-PVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPFKYRYVKDAL  350 (355)
Q Consensus       272 ~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~lG~~p~~~~~~~~l  350 (355)
                      +  +++||+++++++|+.|+++.+.+.+|.+..+ ..|..     .++     .....++++|++++||+|+++ ++++|
T Consensus       234 ~--~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~-----~~~-----~~~~~~d~~k~~~lg~~p~~~-~~~~l  300 (311)
T 2p5y_A          234 L--EGIYNVGTGEGHTTREVLMAVAEAAGKAPEVQPAPPR-----PGD-----LERSVLSPLKLMAHGWRPKVG-FQEGI  300 (311)
T ss_dssp             C--CEEEEESCSCCEEHHHHHHHHHHHHTCCCCEEEECCC-----TTC-----CSBCCBCCHHHHTTTCCCSSC-HHHHH
T ss_pred             C--CCEEEeCCCCCccHHHHHHHHHHHhCCCCCceeCCCC-----ccc-----hhhccCCHHHHHHCCCCCCCC-HHHHH
Confidence            5  6799999999999999999999999976322 12211     111     134567788887799999995 99999


Q ss_pred             HHHh
Q 018503          351 KAIM  354 (355)
Q Consensus       351 ~~~~  354 (355)
                      ++++
T Consensus       301 ~~~~  304 (311)
T 2p5y_A          301 RLTV  304 (311)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            9986

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}

Probab=100.00  E-value=3.9e-39  Score=289.96  Aligned_cols=290  Identities=18%  Similarity=0.174  Sum_probs=212.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcCCCcEEEECCCCCC
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTPI  128 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~~~  128 (355)
                      ++|+|||||||||||++|+++|+++|++|++++|+......+....  .....+|+.|.+++.++++++|+|||+|+...
T Consensus        12 ~~M~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~--~~~~~~Dl~d~~~~~~~~~~~d~vih~a~~~~   89 (342)
T 2x4g_A           12 AHVKYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQRLAYLE--PECRVAEMLDHAGLERALRGLDGVIFSAGYYP   89 (342)
T ss_dssp             CCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECTTSCGGGGGGGC--CEEEECCTTCHHHHHHHTTTCSEEEEC-----
T ss_pred             cCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecChHhhhhhccCC--eEEEEecCCCHHHHHHHHcCCCEEEECCccCc
Confidence            3479999999999999999999999999999999876544322100  01345688899999999999999999999642


Q ss_pred             CCCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCCCC--ccccCCCCCC------Chh-HHHHH
Q 018503          129 GTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSET--EVFDESSPSG------NDY-LAEVC  199 (355)
Q Consensus       129 ~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~~--~~~~e~~~~~------~~y-~~k~~  199 (355)
                         ....++...+++|+.++.++++++.+  .++++|||+||.++  |+....  .+ +|+++..      ..| .+|..
T Consensus        90 ---~~~~~~~~~~~~n~~~~~~l~~a~~~--~~~~~~v~~SS~~~--~~~~~~~~~~-~E~~~~~p~~~~~~~Y~~sK~~  161 (342)
T 2x4g_A           90 ---SRPRRWQEEVASALGQTNPFYAACLQ--ARVPRILYVGSAYA--MPRHPQGLPG-HEGLFYDSLPSGKSSYVLCKWA  161 (342)
T ss_dssp             ----------CHHHHHHHHHHHHHHHHHH--HTCSCEEEECCGGG--SCCCTTSSCB-CTTCCCSSCCTTSCHHHHHHHH
T ss_pred             ---CCCCCHHHHHHHHHHHHHHHHHHHHH--cCCCeEEEECCHHh--hCcCCCCCCC-CCCCCCCccccccChHHHHHHH
Confidence               22345677889999999999999998  68899999999998  886544  34 7777653      367 77877


Q ss_pred             HHHHHHHhccCCCCeEEEEEecEEEeCCC-Cc-ccchHHHHHHHhCCCCCCCCcceecccHHHHHHHHHHHHhCCCCCCc
Q 018503          200 REWEGTALKVNKDVRLALIRIGIVLGKDG-GA-LAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRGV  277 (355)
Q Consensus       200 ~~~~~~~~~~~~~~~~~i~Rp~~i~G~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~~~~  277 (355)
                      .|.....+... +++++++||+.+||+.. .. ...++.  ....+....-++..++++|++|+|++++.++.++..+++
T Consensus       162 ~e~~~~~~~~~-g~~~~ilrp~~v~g~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~g~~  238 (342)
T 2x4g_A          162 LDEQAREQARN-GLPVVIGIPGMVLGELDIGPTTGRVIT--AIGNGEMTHYVAGQRNVIDAAEAGRGLLMALERGRIGER  238 (342)
T ss_dssp             HHHHHHHHHHT-TCCEEEEEECEEECSCCSSCSTTHHHH--HHHTTCCCEEECCEEEEEEHHHHHHHHHHHHHHSCTTCE
T ss_pred             HHHHHHHHhhc-CCcEEEEeCCceECCCCccccHHHHHH--HHHcCCCccccCCCcceeeHHHHHHHHHHHHhCCCCCce
Confidence            77777766655 99999999999999976 21 222221  233444321166789999999999999999987666679


Q ss_pred             eEecCCCccCHHHHHHHHHHHhCCCCCCCCcHHHHHHHh----------c-------ccceeeecCccccchhHHh-CCC
Q 018503          278 INGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVL----------G-------EGAFVVLEGQRVVPARAKE-LGF  339 (355)
Q Consensus       278 ~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~----------~-------~~~~~~~~~~~~~~~k~~~-lG~  339 (355)
                      ||+++++ +|+.|+++.+.+.+|.+..+.+|.+......          +       +..........++++|+++ +||
T Consensus       239 ~~v~~~~-~s~~e~~~~i~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~  317 (342)
T 2x4g_A          239 YLLTGHN-LEMADLTRRIAELLGQPAPQPMSMAMARALATLGRLRYRVSGQLPLLDETAIEVMAGGQFLDGRKAREELGF  317 (342)
T ss_dssp             EEECCEE-EEHHHHHHHHHHHHTCCCCEEECHHHHHHHHHHHHC----------------CCTTCCCCBCCHHHHHHHCC
T ss_pred             EEEcCCc-ccHHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHHHHHHHhhCCCCCCCHHHHHHHhcCcccChHHHHHhCCC
Confidence            9999999 9999999999999998743356665433211          1       0011112456678899965 999


Q ss_pred             -CCCccCHHHHHHHHh
Q 018503          340 -PFKYRYVKDALKAIM  354 (355)
Q Consensus       340 -~p~~~~~~~~l~~~~  354 (355)
                       +| + +++++|++++
T Consensus       318 ~~p-~-~~~~~l~~~~  331 (342)
T 2x4g_A          318 FST-T-ALDDTLLRAI  331 (342)
T ss_dssp             CCC-S-CHHHHHHHHH
T ss_pred             CCC-C-CHHHHHHHHH
Confidence             99 6 5999999876

>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*

Probab=100.00  E-value=1.8e-39  Score=289.66  Aligned_cols=275  Identities=13%  Similarity=0.168  Sum_probs=213.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcC--CCcEEEECCCC
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ--GSTAVVNLAGT  126 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--~~d~vi~~a~~  126 (355)
                      ++|+|||||||||||++|+++|+++|++|++++|+.                .+|+.|.+++.++++  ++|+|||+|+.
T Consensus         2 ~~~~ilVtGatG~iG~~l~~~L~~~g~~v~~~~r~~----------------~~D~~d~~~~~~~~~~~~~d~vih~a~~   65 (321)
T 1e6u_A            2 AKQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRD----------------ELNLLDSRAVHDFFASERIDQVYLAAAK   65 (321)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTT----------------TCCTTCHHHHHHHHHHHCCSEEEECCCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEecCc----------------cCCccCHHHHHHHHHhcCCCEEEEcCee
Confidence            347999999999999999999999999999988752                268889999999998  99999999996


Q ss_pred             CCCCCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCCCCccccCCC----CCCC---hh-HHHH
Q 018503          127 PIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESS----PSGN---DY-LAEV  198 (355)
Q Consensus       127 ~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~----~~~~---~y-~~k~  198 (355)
                      .........++...+++|+.++.++++++.+  .++++|||+||.++  ||.....+++|++    +..+   .| .+|.
T Consensus        66 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~--~~~~~~v~~SS~~v--yg~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~  141 (321)
T 1e6u_A           66 VGGIVANNTYPADFIYQNMMIESNIIHAAHQ--NDVNKLLFLGSSCI--YPKLAKQPMAESELLQGTLEPTNEPYAIAKI  141 (321)
T ss_dssp             CCCHHHHHHCHHHHHHHHHHHHHHHHHHHHH--TTCCEEEEECCGGG--SCTTCCSSBCGGGTTSSCCCGGGHHHHHHHH
T ss_pred             cCCcchhhhCHHHHHHHHHHHHHHHHHHHHH--hCCCeEEEEccHHH--cCCCCCCCcCccccccCCCCCCCCccHHHHH
Confidence            4221123445678899999999999999999  68899999999998  9876667777775    3332   56 7777


Q ss_pred             HHHHHHHHhccCCCCeEEEEEecEEEeCCCCcc---cchHHHH--HHH----hC-CC---CCCCCcceecccHHHHHHHH
Q 018503          199 CREWEGTALKVNKDVRLALIRIGIVLGKDGGAL---AKMIPLF--MMF----AG-GP---LGSGQQWFSWIHLDDIVNLI  265 (355)
Q Consensus       199 ~~~~~~~~~~~~~~~~~~i~Rp~~i~G~~~~~~---~~~~~~~--~~~----~~-~~---~~~~~~~~~~i~v~Dva~~~  265 (355)
                      ..|.....+..+.+++++++||+.+||++....   ..+++.+  ...    .+ .+   +++++..++|+|++|+|+++
T Consensus       142 ~~E~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~i~v~Dva~~~  221 (321)
T 1e6u_A          142 AGIKLCESYNRQYGRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSGTPMREFLHVDDMAAAS  221 (321)
T ss_dssp             HHHHHHHHHHHHHCCEEEEEEECEEESTTCCCCTTCSSHHHHHHHHHHHHHHHTCSEEEEESCSCCEECEEEHHHHHHHH
T ss_pred             HHHHHHHHHHHHhCCCEEEEEeCCcCCcCCCCCCCCCccHHHHHHHHHHhhhcCCCceEEcCCCCEEEEeEEHHHHHHHH
Confidence            777777666655689999999999999976421   1233222  111    23 33   26788899999999999999


Q ss_pred             HHHHhCCCC---------CCceEecCCCccCHHHHHHHHHHHhCCCCCCC-CcHHHHHHHhcccceeeecCccccchhHH
Q 018503          266 YEALSNPSY---------RGVINGTAPNPVRLAEMCDHLGNVLGRPSWLP-VPEFALKAVLGEGAFVVLEGQRVVPARAK  335 (355)
Q Consensus       266 ~~~~~~~~~---------~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~k~~  335 (355)
                      +.+++++..         +++||+++++++|+.|+++.+.+.+|.+..+. .+..     ..     ......++++|++
T Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~-----~~-----~~~~~~~d~~k~~  291 (321)
T 1e6u_A          222 IHVMELAHEVWLENTQPMLSHINVGTGVDCTIRELAQTIAKVVGYKGRVVFDASK-----PD-----GTPRKLLDVTRLH  291 (321)
T ss_dssp             HHHHHSCHHHHHHTSBTTBCCEEESCSCCEEHHHHHHHHHHHHTCCSEEEEETTS-----CC-----CCSBCCBCCHHHH
T ss_pred             HHHHhCcccccccccccCCceEEeCCCCCccHHHHHHHHHHHhCCCCceEeCCCC-----CC-----CcccccCCHHHHH
Confidence            999987653         47999999999999999999999999763221 1110     00     1234567888897


Q ss_pred             hCCCCCCccCHHHHHHHHh
Q 018503          336 ELGFPFKYRYVKDALKAIM  354 (355)
Q Consensus       336 ~lG~~p~~~~~~~~l~~~~  354 (355)
                      ++||+|+++ ++++|++++
T Consensus       292 ~lG~~p~~~-~~~~l~~~~  309 (321)
T 1e6u_A          292 QLGWYHEIS-LEAGLASTY  309 (321)
T ss_dssp             HTTCCCCCC-HHHHHHHHH
T ss_pred             hcCCccCCc-HHHHHHHHH
Confidence            799999996 999999886

>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}

Probab=100.00  E-value=1.5e-39  Score=289.55  Aligned_cols=281  Identities=16%  Similarity=0.149  Sum_probs=214.5

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcCC--CcEEEECCC
Q 018503           48 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQG--STAVVNLAG  125 (355)
Q Consensus        48 ~~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~--~d~vi~~a~  125 (355)
                      +++|+|||||||||||++|+++|+++|+      +...... ...      ...+|+.|++.+.+++++  +|+|||+|+
T Consensus         4 ~~~~~vlVtGatG~iG~~l~~~L~~~g~------~~~~~~~-~~~------~~~~D~~d~~~~~~~~~~~~~d~Vih~A~   70 (319)
T 4b8w_A            4 FQSMRILVTGGSGLVGKAIQKVVADGAG------LPGEDWV-FVS------SKDADLTDTAQTRALFEKVQPTHVIHLAA   70 (319)
T ss_dssp             CCCCEEEEETCSSHHHHHHHHHHHTTTC------CTTCEEE-ECC------TTTCCTTSHHHHHHHHHHSCCSEEEECCC
T ss_pred             ccCCeEEEECCCcHHHHHHHHHHHhcCC------ccccccc-ccC------ceecccCCHHHHHHHHhhcCCCEEEECce
Confidence            3568999999999999999999999998      2111111 011      445799999999999976  999999999


Q ss_pred             CCCCCCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCCCCccccCCC----CCCC---hh-HHH
Q 018503          126 TPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESS----PSGN---DY-LAE  197 (355)
Q Consensus       126 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~----~~~~---~y-~~k  197 (355)
                      ..........++...+++|+.++.++++++++  .++++|||+||.++  ||.....+++|++    ++.+   .| .+|
T Consensus        71 ~~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~--~~~~~~v~~SS~~v--yg~~~~~~~~E~~~~~~~~~p~~~~Y~~sK  146 (319)
T 4b8w_A           71 MVGGLFRNIKYNLDFWRKNVHMNDNVLHSAFE--VGARKVVSCLSTCI--FPDKTTYPIDETMIHNGPPHNSNFGYSYAK  146 (319)
T ss_dssp             CCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHH--TTCSEEEEECCGGG--SCSSCCSSBCGGGGGBSCCCSSSHHHHHHH
T ss_pred             ecccccccccCHHHHHHHHHHHHHHHHHHHHH--cCCCeEEEEcchhh--cCCCCCCCccccccccCCCCCCcchHHHHH
Confidence            74322223455678899999999999999999  78999999999998  9987777888875    3332   37 778


Q ss_pred             HHHHHHHHHhccCCCCeEEEEEecEEEeCCCCc---ccchHHHH--H----HHhCCCC---CCCCcceecccHHHHHHHH
Q 018503          198 VCREWEGTALKVNKDVRLALIRIGIVLGKDGGA---LAKMIPLF--M----MFAGGPL---GSGQQWFSWIHLDDIVNLI  265 (355)
Q Consensus       198 ~~~~~~~~~~~~~~~~~~~i~Rp~~i~G~~~~~---~~~~~~~~--~----~~~~~~~---~~~~~~~~~i~v~Dva~~~  265 (355)
                      ...|.....+..+.+++++++||+++||++...   ...+++.+  .    ...+.++   +++++.++|+|++|+|+++
T Consensus       147 ~~~E~~~~~~~~~~~~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~  226 (319)
T 4b8w_A          147 RMIDVQNRAYFQQYGCTFTAVIPTNVFGPHDNFNIEDGHVLPGLIHKVHLAKSSGSALTVWGTGNPRRQFIYSLDLAQLF  226 (319)
T ss_dssp             HHHHHHHHHHHHHHCCEEEEEEECEEECTTCCCCTTTSCHHHHHHHHHHHHHHHTCCEEEESCSCCEECEEEHHHHHHHH
T ss_pred             HHHHHHHHHHHHhhCCCEEEEeeccccCCCCCCCCccccccHHHHHHHHHHhccCCceEEeCCCCeeEEEEeHHHHHHHH
Confidence            888877777766679999999999999997642   12233322  2    3456554   7888999999999999999


Q ss_pred             HHHHhCCC--CCCceEecCCCccCHHHHHHHHHHHhCCCCCCCCcHHHHHHHhcccceeeecCccccchhHHh-CCCCCC
Q 018503          266 YEALSNPS--YRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKE-LGFPFK  342 (355)
Q Consensus       266 ~~~~~~~~--~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~-lG~~p~  342 (355)
                      +.++.++.  .+++||+++++++|+.|+++.+.+.+|++..+......    ..     ......++++|+++ |||.|+
T Consensus       227 ~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~----~~-----~~~~~~~d~~k~~~~lg~~p~  297 (319)
T 4b8w_A          227 IWVLREYNEVEPIILSVGEEDEVSIKEAAEAVVEAMDFHGEVTFDTTK----SD-----GQFKKTASNSKLRTYLPDFRF  297 (319)
T ss_dssp             HHHHHHCCCSSCEEECCCGGGCEEHHHHHHHHHHHTTCCSCEEEETTS----CC-----CCSCCCBCCHHHHHHCTTCCC
T ss_pred             HHHHhccccCCceEEEecCCCceeHHHHHHHHHHHhCCCCcEEeCCCC----Cc-----CcccccCCHHHHHHhcCCCCC
Confidence            99998744  34599999999999999999999999987433221110    01     11334678888976 999999


Q ss_pred             ccCHHHHHHHHhC
Q 018503          343 YRYVKDALKAIMS  355 (355)
Q Consensus       343 ~~~~~~~l~~~~~  355 (355)
                      ++ ++++|+++++
T Consensus       298 ~~-~~~~l~~~~~  309 (319)
T 4b8w_A          298 TP-FKQAVKETCA  309 (319)
T ss_dssp             CC-HHHHHHHHHH
T ss_pred             CC-HHHHHHHHHH
Confidence            96 9999999863

>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0

Probab=100.00  E-value=1.6e-39  Score=285.31  Aligned_cols=269  Identities=15%  Similarity=0.114  Sum_probs=211.3

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcC--CCcEEEECCCCC
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ--GSTAVVNLAGTP  127 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--~~d~vi~~a~~~  127 (355)
                      +|+|||||||||||++|++.|+++|++|++++|.                 .+|+.|.+.+.++++  ++|+|||+|+..
T Consensus         5 ~m~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~-----------------~~D~~d~~~~~~~~~~~~~d~vi~~a~~~   67 (287)
T 3sc6_A            5 KERVIITGANGQLGKQLQEELNPEEYDIYPFDKK-----------------LLDITNISQVQQVVQEIRPHIIIHCAAYT   67 (287)
T ss_dssp             CEEEEEESTTSHHHHHHHHHSCTTTEEEEEECTT-----------------TSCTTCHHHHHHHHHHHCCSEEEECCCCC
T ss_pred             eeEEEEECCCCHHHHHHHHHHHhCCCEEEEeccc-----------------ccCCCCHHHHHHHHHhcCCCEEEECCccc
Confidence            3699999999999999999999999999999992                 168889999999887  799999999975


Q ss_pred             CCCCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCCCCccccCCCCCC--Chh-HHHHHHHHHH
Q 018503          128 IGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSG--NDY-LAEVCREWEG  204 (355)
Q Consensus       128 ~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~--~~y-~~k~~~~~~~  204 (355)
                      .. .....++...+++|+.++.++++++++  .++ ++||+||.++  ||...+.+++|+++..  ..| .+|...|...
T Consensus        68 ~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~--~~~-~~v~~SS~~v--y~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~  141 (287)
T 3sc6_A           68 KV-DQAEKERDLAYVINAIGARNVAVASQL--VGA-KLVYISTDYV--FQGDRPEGYDEFHNPAPINIYGASKYAGEQFV  141 (287)
T ss_dssp             CH-HHHTTCHHHHHHHHTHHHHHHHHHHHH--HTC-EEEEEEEGGG--SCCCCSSCBCTTSCCCCCSHHHHHHHHHHHHH
T ss_pred             Ch-HHHhcCHHHHHHHHHHHHHHHHHHHHH--cCC-eEEEEchhhh--cCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Confidence            22 122245678999999999999999998  566 6999999998  9887778899988754  456 6676666665


Q ss_pred             HHhccCCCCeEEEEEecEEEeCCCCcccchHHHH-H-HHhCCCC-CCCCcceecccHHHHHHHHHHHHhCCCCCCceEec
Q 018503          205 TALKVNKDVRLALIRIGIVLGKDGGALAKMIPLF-M-MFAGGPL-GSGQQWFSWIHLDDIVNLIYEALSNPSYRGVINGT  281 (355)
Q Consensus       205 ~~~~~~~~~~~~i~Rp~~i~G~~~~~~~~~~~~~-~-~~~~~~~-~~~~~~~~~i~v~Dva~~~~~~~~~~~~~~~~~i~  281 (355)
                      ..+.    .+++++||+.+||+....   ++..+ . ...+.++ ..+++.++++|++|+|++++.++.++. +++||++
T Consensus       142 ~~~~----~~~~ilR~~~v~G~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~-~~~~~i~  213 (287)
T 3sc6_A          142 KELH----NKYFIVRTSWLYGKYGNN---FVKTMIRLGKEREEISVVADQIGSPTYVADLNVMINKLIHTSL-YGTYHVS  213 (287)
T ss_dssp             HHHC----SSEEEEEECSEECSSSCC---HHHHHHHHHTTCSEEEEECSCEECCEEHHHHHHHHHHHHTSCC-CEEEECC
T ss_pred             HHhC----CCcEEEeeeeecCCCCCc---HHHHHHHHHHcCCCeEeecCcccCceEHHHHHHHHHHHHhCCC-CCeEEEc
Confidence            5543    478999999999987543   23222 2 2234443 234588999999999999999999887 7899999


Q ss_pred             CCCccCHHHHHHHHHHHhCCCCC-CCCcHHHHHHHhcccceeeecCccccchhHHhCCCCCCccCHHHHHHHHhC
Q 018503          282 APNPVRLAEMCDHLGNVLGRPSW-LPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPFKYRYVKDALKAIMS  355 (355)
Q Consensus       282 ~~~~~s~~el~~~i~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~lG~~p~~~~~~~~l~~~~~  355 (355)
                      +++++|+.|+++.+++.+|++.. .+++.........     ......++++|++++||.|+++ ++++|+++++
T Consensus       214 ~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~-----~~~~~~~d~~k~~~lg~~p~~~-~~~~l~~~~~  282 (287)
T 3sc6_A          214 NTGSCSWFEFAKKIFSYANMKVNVLPVSTEEFGAAAA-----RPKYSIFQHNMLRLNGFLQMPS-WEEGLERFFI  282 (287)
T ss_dssp             CBSCEEHHHHHHHHHHHHTCCCEEEEECHHHHCCSSC-----CCSBCCBCCHHHHHTTCCCCCB-HHHHHHHHHH
T ss_pred             CCCcccHHHHHHHHHHHcCCCcceeeeehhhcCcccC-----CCCcccccHHHHHhhCCCCCcc-HHHHHHHHHH
Confidence            99999999999999999998743 3444433221111     1234567888899999999996 9999999863

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*

Probab=100.00  E-value=1.3e-38  Score=287.68  Aligned_cols=291  Identities=17%  Similarity=0.148  Sum_probs=220.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchh----hccC--------CCCCCccCCCeeecCCcchhhhcCC
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKA----ELIF--------PGKKTRFFPGVMIAEEPQWRDCIQG  116 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~----~~~~--------~~~~~~~~~~~d~~~~~~~~~~~~~  116 (355)
                      ++|+|||||||||||++|+++|++.|++|++++|+....    ..+.        ...   ....+|+.|.+++.+++++
T Consensus        26 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~Dl~d~~~~~~~~~~  102 (352)
T 1sb8_A           26 QPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNF---KFIQGDIRNLDDCNNACAG  102 (352)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTE---EEEECCTTSHHHHHHHHTT
T ss_pred             cCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCccchhhHHHHhhhcccccCCce---EEEECCCCCHHHHHHHhcC
Confidence            457999999999999999999999999999999976421    1100        110   1345688899999999999


Q ss_pred             CcEEEECCCCCCCCCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCCCCccccCCCCC--CChh
Q 018503          117 STAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPS--GNDY  194 (355)
Q Consensus       117 ~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~--~~~y  194 (355)
                      +|+|||+|+.... .....++...+++|+.++.++++++.+  .++++|||+||.++  |+...+.+++|+++.  ...|
T Consensus       103 ~d~vih~A~~~~~-~~~~~~~~~~~~~n~~~~~~l~~a~~~--~~~~~~v~~SS~~~--~~~~~~~~~~E~~~~~~~~~Y  177 (352)
T 1sb8_A          103 VDYVLHQAALGSV-PRSINDPITSNATNIDGFLNMLIAARD--AKVQSFTYAASSST--YGDHPGLPKVEDTIGKPLSPY  177 (352)
T ss_dssp             CSEEEECCSCCCH-HHHHHCHHHHHHHHTHHHHHHHHHHHH--TTCSEEEEEEEGGG--GTTCCCSSBCTTCCCCCCSHH
T ss_pred             CCEEEECCcccCc-hhhhhCHHHHHHHHHHHHHHHHHHHHH--cCCCEEEEeccHHh--cCCCCCCCCCCCCCCCCCChh
Confidence            9999999996421 112345678889999999999999998  68899999999998  987766788888764  3467


Q ss_pred             -HHHHHHHHHHHHhccCCCCeEEEEEecEEEeCCCCcc---cchHHHH--HHHhCCCC---CCCCcceecccHHHHHHHH
Q 018503          195 -LAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGAL---AKMIPLF--MMFAGGPL---GSGQQWFSWIHLDDIVNLI  265 (355)
Q Consensus       195 -~~k~~~~~~~~~~~~~~~~~~~i~Rp~~i~G~~~~~~---~~~~~~~--~~~~~~~~---~~~~~~~~~i~v~Dva~~~  265 (355)
                       .+|...|.....+..+.+++++++||+++||+.....   ..+++.+  ....+.++   +++++.++++|++|+|+++
T Consensus       178 ~~sK~~~e~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~a~  257 (352)
T 1sb8_A          178 AVTKYVNELYADVFSRCYGFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETSRDFCYIENTVQAN  257 (352)
T ss_dssp             HHHHHHHHHHHHHHHHHHCCCCEEEEECCEECTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECCEEHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHcCCCEEEEEECceeCcCCCCCcchhhHHHHHHHHHHCCCCcEEeCCCCceEeeEEHHHHHHHH
Confidence             7787777777666655689999999999999975321   2233322  33455553   6778899999999999999


Q ss_pred             HHHHhCC--CCCCceEecCCCccCHHHHHHHHHHHh---CCCCCCCCcHHHHHHHhcccceeeecCccccchhHH-hCCC
Q 018503          266 YEALSNP--SYRGVINGTAPNPVRLAEMCDHLGNVL---GRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAK-ELGF  339 (355)
Q Consensus       266 ~~~~~~~--~~~~~~~i~~~~~~s~~el~~~i~~~~---g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~-~lG~  339 (355)
                      +.++...  ..+++||+++++++|+.|+++.+++.+   |.+.... |.+. ....+     ......++++|++ .+||
T Consensus       258 ~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~~~~g~~~~~~-~~~~-~~~~~-----~~~~~~~d~~k~~~~lG~  330 (352)
T 1sb8_A          258 LLAATAGLDARNQVYNIAVGGRTSLNQLFFALRDGLAENGVSYHRE-PVYR-DFREG-----DVRHSLADISKAAKLLGY  330 (352)
T ss_dssp             HHHHTCCGGGCSEEEEESCSCCEEHHHHHHHHHHHHHHTTCCCCCC-CEEE-CCCTT-----CCSBCCBCCHHHHHHTCC
T ss_pred             HHHHhccccCCCceEEeCCCCCccHHHHHHHHHHHHHhcCCCCCCC-ceec-CCCcc-----chhhccCCHHHHHHHhCC
Confidence            9999863  246799999999999999999999999   8763221 1100 00001     1134567788886 5999


Q ss_pred             CCCccCHHHHHHHHhC
Q 018503          340 PFKYRYVKDALKAIMS  355 (355)
Q Consensus       340 ~p~~~~~~~~l~~~~~  355 (355)
                      +|+++ ++|+|+++++
T Consensus       331 ~p~~~-~~e~l~~~~~  345 (352)
T 1sb8_A          331 APKYD-VSAGVALAMP  345 (352)
T ss_dssp             CCCCC-HHHHHHHHHH
T ss_pred             CCCCC-HHHHHHHHHH
Confidence            99996 9999998863

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*

Probab=100.00  E-value=1.3e-38  Score=284.96  Aligned_cols=287  Identities=18%  Similarity=0.224  Sum_probs=209.8

Q ss_pred             cccCCCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcC--CCcEEEE
Q 018503           45 TQKASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ--GSTAVVN  122 (355)
Q Consensus        45 ~~~~~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--~~d~vi~  122 (355)
                      +.....|+||||||+||||++|+++|+++|++|++++|+..................+|+.|.+++.++++  ++|+|||
T Consensus        15 ~~~~~~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~l~~v~~~~~Dl~d~~~~~~~~~~~~~D~vih   94 (330)
T 2pzm_A           15 VPRGSHMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGKREVLPPVAGLSVIEGSVTDAGLLERAFDSFKPTHVVH   94 (330)
T ss_dssp             CSTTTCCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCSSSCGGGSCSCTTEEEEECCTTCHHHHHHHHHHHCCSEEEE
T ss_pred             cccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCccchhhhhccCCceEEEeeCCCHHHHHHHHhhcCCCEEEE
Confidence            34455689999999999999999999999999999999765432111110001133468889999999998  9999999


Q ss_pred             CCCCCCCCCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCCCCc--cccCCCCCCChh-HHHHH
Q 018503          123 LAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETE--VFDESSPSGNDY-LAEVC  199 (355)
Q Consensus       123 ~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~~~--~~~e~~~~~~~y-~~k~~  199 (355)
                      +||.....  ...++.  +++|+.++.++++++.+  .++++|||+||.++  |+.....  +++|++.+...| .+|..
T Consensus        95 ~A~~~~~~--~~~~~~--~~~N~~~~~~l~~a~~~--~~~~~iV~~SS~~~--~~~~~~~~~~~~E~~~~~~~Y~~sK~~  166 (330)
T 2pzm_A           95 SAAAYKDP--DDWAED--AATNVQGSINVAKAASK--AGVKRLLNFQTALC--YGRPATVPIPIDSPTAPFTSYGISKTA  166 (330)
T ss_dssp             CCCCCSCT--TCHHHH--HHHHTHHHHHHHHHHHH--HTCSEEEEEEEGGG--GCSCSSSSBCTTCCCCCCSHHHHHHHH
T ss_pred             CCccCCCc--cccChh--HHHHHHHHHHHHHHHHH--cCCCEEEEecCHHH--hCCCccCCCCcCCCCCCCChHHHHHHH
Confidence            99975321  233344  89999999999999998  68899999999988  8865443  677776445667 67766


Q ss_pred             HHHHHHHhccCCCCeEEEEEecEEEeCCCCcccchHHHH--HHHhCCC-CCCCCcceecccHHHHHH-HHHHHHhCCCCC
Q 018503          200 REWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLF--MMFAGGP-LGSGQQWFSWIHLDDIVN-LIYEALSNPSYR  275 (355)
Q Consensus       200 ~~~~~~~~~~~~~~~~~i~Rp~~i~G~~~~~~~~~~~~~--~~~~~~~-~~~~~~~~~~i~v~Dva~-~~~~~~~~~~~~  275 (355)
                      .|.....+    +++++++||+++|||+..  ..+...+  ....+.. ++++. .++++|++|+|+ +++.++..+. +
T Consensus       167 ~e~~~~~~----~~~~~~iR~~~v~gp~~~--~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~Dva~~a~~~~~~~~~-g  238 (330)
T 2pzm_A          167 GEAFLMMS----DVPVVSLRLANVTGPRLA--IGPIPTFYKRLKAGQKCFCSDT-VRDFLDMSDFLAIADLSLQEGRP-T  238 (330)
T ss_dssp             HHHHHHTC----SSCEEEEEECEEECTTCC--SSHHHHHHHHHHTTCCCCEESC-EECEEEHHHHHHHHHHHTSTTCC-C
T ss_pred             HHHHHHHc----CCCEEEEeeeeeECcCCC--CCHHHHHHHHHHcCCEEeCCCC-EecceeHHHHHHHHHHHHhhcCC-C
Confidence            66555443    799999999999999851  1233222  2223332 34555 789999999999 9999998766 7


Q ss_pred             CceEecCCCccCHHHHHHHHHHHhCCCCCCCCcHHHHHHHhcccceeeecCccccchhHHhCCCCCCccCHHHHHHHHh
Q 018503          276 GVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPFKYRYVKDALKAIM  354 (355)
Q Consensus       276 ~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~lG~~p~~~~~~~~l~~~~  354 (355)
                      ++||+++++++|+.|+++.+.+.+|.+.....|.+.      +......++.++.+.+++++||+|+++ ++++|++++
T Consensus       239 ~~~~v~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~------~~~~~~~d~~k~~~~~l~~lG~~p~~~-~~~~l~~~~  310 (330)
T 2pzm_A          239 GVFNVSTGEGHSIKEVFDVVLDYVGATLAEPVPVVA------PGADDVPSVVLDPSKTETEFGWKAKVD-FKDTITGQL  310 (330)
T ss_dssp             EEEEESCSCCEEHHHHHHHHHHHHTCCCSSCCCEEC------CCTTSCSEECBCCHHHHHHHCCCCCCC-HHHHHHHHH
T ss_pred             CEEEeCCCCCCCHHHHHHHHHHHhCCCCceeCCCCc------chhhccCCHHHHhhchHHHcCCcccCC-HHHHHHHHH
Confidence            799999999999999999999999987222223221      122223344444444448899999995 999999886

>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}

Probab=100.00  E-value=6.8e-39  Score=285.88  Aligned_cols=286  Identities=17%  Similarity=0.135  Sum_probs=217.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcCC--CcEEEECCCC
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQG--STAVVNLAGT  126 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~--~d~vi~~a~~  126 (355)
                      .+|+|||||||||||++|+++|+++|++|++++|+... ..+  .   .....+|+.|.+.+.+++++  +|+|||+|+.
T Consensus        11 ~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-~~l--~---~~~~~~Dl~d~~~~~~~~~~~~~d~vih~A~~   84 (321)
T 2pk3_A           11 GSMRALITGVAGFVGKYLANHLTEQNVEVFGTSRNNEA-KLP--N---VEMISLDIMDSQRVKKVISDIKPDYIFHLAAK   84 (321)
T ss_dssp             --CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCTTC-CCT--T---EEEEECCTTCHHHHHHHHHHHCCSEEEECCSC
T ss_pred             CcceEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcc-ccc--e---eeEEECCCCCHHHHHHHHHhcCCCEEEEcCcc
Confidence            45799999999999999999999999999999998765 221  1   11345788899999998875  9999999996


Q ss_pred             CCCCCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCC--CCccccCCCCC--CChh-HHHHHHH
Q 018503          127 PIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTS--ETEVFDESSPS--GNDY-LAEVCRE  201 (355)
Q Consensus       127 ~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~--~~~~~~e~~~~--~~~y-~~k~~~~  201 (355)
                      ... .....++...+++|+.++.++++++... .++++|||+||.++  ||..  ...+++|+++.  ...| .+|...|
T Consensus        85 ~~~-~~~~~~~~~~~~~Nv~g~~~l~~a~~~~-~~~~~iv~~SS~~v--~g~~~~~~~~~~E~~~~~~~~~Y~~sK~~~E  160 (321)
T 2pk3_A           85 SSV-KDSWLNKKGTFSTNVFGTLHVLDAVRDS-NLDCRILTIGSSEE--YGMILPEESPVSEENQLRPMSPYGVSKASVG  160 (321)
T ss_dssp             CCH-HHHTTCHHHHHHHHHHHHHHHHHHHHHH-TCCCEEEEEEEGGG--TBSCCGGGCSBCTTSCCBCCSHHHHHHHHHH
T ss_pred             cch-hhhhhcHHHHHHHHHHHHHHHHHHHHHh-CCCCeEEEEccHHh--cCCCCCCCCCCCCCCCCCCCCccHHHHHHHH
Confidence            421 1123356788999999999999999762 25889999999998  8865  56678887764  4567 7788777


Q ss_pred             HHHHHhccCCCCeEEEEEecEEEeCCCCcccchHHHH--HHHh---C--CC---CCCCCcceecccHHHHHHHHHHHHhC
Q 018503          202 WEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLF--MMFA---G--GP---LGSGQQWFSWIHLDDIVNLIYEALSN  271 (355)
Q Consensus       202 ~~~~~~~~~~~~~~~i~Rp~~i~G~~~~~~~~~~~~~--~~~~---~--~~---~~~~~~~~~~i~v~Dva~~~~~~~~~  271 (355)
                      .....+..+.+++++++||+++||++.... .+.+.+  ....   +  .+   ++.++..++++|++|+|++++.++..
T Consensus       161 ~~~~~~~~~~gi~~~ilrp~~v~g~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~  239 (321)
T 2pk3_A          161 MLARQYVKAYGMDIIHTRTFNHIGPGQSLG-FVTQDFAKQIVDIEMEKQEPIIKVGNLEAVRDFTDVRDIVQAYWLLSQY  239 (321)
T ss_dssp             HHHHHHHHHHCCEEEEEEECEEECTTCCTT-SHHHHHHHHHHHHHTTSSCSEEEESCSSCEEEEEEHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHcCCCEEEEEeCcccCcCCCCC-chHHHHHHHHHHHhcCCCCCeEEeCCCCcEEeeEEHHHHHHHHHHHHhC
Confidence            777766666699999999999999976432 122222  2222   4  23   26778889999999999999999987


Q ss_pred             CCCCCceEecCCCccCHHHHHHHHHHHhCCCCCC-CCcHHHHHHHhcccceeeecCccccchhHHh-CCCCCCccCHHHH
Q 018503          272 PSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWL-PVPEFALKAVLGEGAFVVLEGQRVVPARAKE-LGFPFKYRYVKDA  349 (355)
Q Consensus       272 ~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~-lG~~p~~~~~~~~  349 (355)
                      +..+++||+++++++|+.|+++.+.+.+|.+..+ ..|..     ...   .......++++|+++ |||+|+++ ++++
T Consensus       240 ~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~p~~-----~~~---~~~~~~~~d~~k~~~~lG~~p~~~-~~e~  310 (321)
T 2pk3_A          240 GKTGDVYNVCSGIGTRIQDVLDLLLAMANVKIDTELNPLQ-----LRP---SEVPTLIGSNKRLKDSTGWKPRIP-LEKS  310 (321)
T ss_dssp             CCTTCEEEESCSCEEEHHHHHHHHHHHSSSCCEEEECGGG-----CCS---SCCSBCCBCCHHHHHHHCCCCCSC-HHHH
T ss_pred             CCCCCeEEeCCCCCeeHHHHHHHHHHHhCCCCceeecccc-----CCC---cccchhccCHHHHHHHcCCCcCCC-HHHH
Confidence            6556799999999999999999999999986322 22321     000   112446678888865 89999995 9999


Q ss_pred             HHHHh
Q 018503          350 LKAIM  354 (355)
Q Consensus       350 l~~~~  354 (355)
                      |++++
T Consensus       311 l~~~~  315 (321)
T 2pk3_A          311 LFEIL  315 (321)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            99886

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*

Probab=100.00  E-value=1.2e-38  Score=290.68  Aligned_cols=287  Identities=18%  Similarity=0.211  Sum_probs=218.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcCCCcEEEECCCCCC
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTPI  128 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~~~  128 (355)
                      ++|+|||||||||||++|+++|+++|++|++++|+...........  .....+|+.|.+++.++++++|+|||+|+...
T Consensus        28 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~--v~~~~~Dl~d~~~~~~~~~~~d~Vih~A~~~~  105 (379)
T 2c5a_A           28 ENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTEDMFC--DEFHLVDLRVMENCLKVTEGVDHVFNLAADMG  105 (379)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCGGGTC--SEEEECCTTSHHHHHHHHTTCSEEEECCCCCC
T ss_pred             cCCeEEEECCccHHHHHHHHHHHHCCCeEEEEECCCccchhhccCC--ceEEECCCCCHHHHHHHhCCCCEEEECceecC
Confidence            3579999999999999999999999999999999876533221110  01335788899999999999999999999643


Q ss_pred             CCCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCCCC-----ccccCCC--C--CCChh-HHHH
Q 018503          129 GTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSET-----EVFDESS--P--SGNDY-LAEV  198 (355)
Q Consensus       129 ~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~~-----~~~~e~~--~--~~~~y-~~k~  198 (355)
                      ...+...++...+++|+.++.++++++++  .++++|||+||.++  |+....     .+++|++  +  +...| .+|.
T Consensus       106 ~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~--~~~~~~V~~SS~~v--~~~~~~~~~~~~~~~E~~~~~~~~~~~Y~~sK~  181 (379)
T 2c5a_A          106 GMGFIQSNHSVIMYNNTMISFNMIEAARI--NGIKRFFYASSACI--YPEFKQLETTNVSLKESDAWPAEPQDAFGLEKL  181 (379)
T ss_dssp             CHHHHTTCHHHHHHHHHHHHHHHHHHHHH--TTCSEEEEEEEGGG--SCGGGSSSSSSCEECGGGGSSBCCSSHHHHHHH
T ss_pred             cccccccCHHHHHHHHHHHHHHHHHHHHH--cCCCEEEEEeehhe--eCCCCCCCccCCCcCcccCCCCCCCChhHHHHH
Confidence            21121345678899999999999999998  68899999999988  874322     3456654  2  34567 7888


Q ss_pred             HHHHHHHHhccCCCCeEEEEEecEEEeCCCCcc---cchHHHH--HHHhCCC----CCCCCcceecccHHHHHHHHHHHH
Q 018503          199 CREWEGTALKVNKDVRLALIRIGIVLGKDGGAL---AKMIPLF--MMFAGGP----LGSGQQWFSWIHLDDIVNLIYEAL  269 (355)
Q Consensus       199 ~~~~~~~~~~~~~~~~~~i~Rp~~i~G~~~~~~---~~~~~~~--~~~~~~~----~~~~~~~~~~i~v~Dva~~~~~~~  269 (355)
                      ..|.....+..+.+++++++||+++||+.....   ..+...+  ....+.+    ++++++.++++|++|+|++++.++
T Consensus       182 ~~E~~~~~~~~~~gi~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~ai~~~l  261 (379)
T 2c5a_A          182 ATEELCKHYNKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDECVEGVLRLT  261 (379)
T ss_dssp             HHHHHHHHHHHHHCCEEEEEEECCEECTTSCCSSSCCCHHHHHHHHHHHCSSCEEEESCSCCEECCEEHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHCCCEEEEEeCceeCcCCCcccccccHHHHHHHHHHhCCCceEEeCCCCeeEEEEEHHHHHHHHHHHh
Confidence            788777766656699999999999999975321   1123222  3334544    367788999999999999999999


Q ss_pred             hCCCCCCceEecCCCccCHHHHHHHHHHHhCCCCC-CCCcHHHHHHHhcccceeeecCccccchhHHh-CCCCCCccCHH
Q 018503          270 SNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSW-LPVPEFALKAVLGEGAFVVLEGQRVVPARAKE-LGFPFKYRYVK  347 (355)
Q Consensus       270 ~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~-lG~~p~~~~~~  347 (355)
                      +.+ .+++||+++++++|+.|+++.+.+.+|++.. ..+|.+.      .     .....++++|+++ |||+|+++ ++
T Consensus       262 ~~~-~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~p~~~------~-----~~~~~~d~~k~~~~lG~~p~~~-l~  328 (379)
T 2c5a_A          262 KSD-FREPVNIGSDEMVSMNEMAEMVLSFEEKKLPIHHIPGPE------G-----VRGRNSDNNLIKEKLGWAPNMR-LK  328 (379)
T ss_dssp             HSS-CCSCEEECCCCCEEHHHHHHHHHHTTTCCCCEEEECCCC------C-----CSBCEECCHHHHHHHSCCCCCC-HH
T ss_pred             hcc-CCCeEEeCCCCccCHHHHHHHHHHHhCCCCceeeCCCCC------C-----cccccCCHHHHHHHhCCCCCCC-HH
Confidence            876 5789999999999999999999999997632 2233210      1     1234577888864 99999996 99


Q ss_pred             HHHHHHh
Q 018503          348 DALKAIM  354 (355)
Q Consensus       348 ~~l~~~~  354 (355)
                      ++|++++
T Consensus       329 e~l~~~~  335 (379)
T 2c5a_A          329 EGLRITY  335 (379)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            9999886

>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*

Probab=100.00  E-value=5.6e-38  Score=284.06  Aligned_cols=285  Identities=13%  Similarity=0.142  Sum_probs=218.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCC-CeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcC-----CCcEEEE
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADN-HQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ-----GSTAVVN  122 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-----~~d~vi~  122 (355)
                      .+|+|||||||||||++|+++|+++| ++|++++|+............   ....|+.|.+.+.++++     ++|+|||
T Consensus        45 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~---~~~~d~~~~~~~~~~~~~~~~~~~d~Vih  121 (357)
T 2x6t_A           45 EGRMIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLVDL---NIADYMDKEDFLIQIMAGEEFGDVEAIFH  121 (357)
T ss_dssp             ---CEEEETTTSHHHHHHHHHHHHTTCCCEEEEECCSSGGGGGGTTTS---CCSEEEEHHHHHHHHHTTCCCSSCCEEEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCcEEEEEecCCCcchhhcccCc---eEeeecCcHHHHHHHHhhcccCCCCEEEE
Confidence            34789999999999999999999999 999999998765311110111   14478888888888886     5999999


Q ss_pred             CCCCCCCCCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCCCCccccCCCCC--CChh-HHHHH
Q 018503          123 LAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPS--GNDY-LAEVC  199 (355)
Q Consensus       123 ~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~--~~~y-~~k~~  199 (355)
                      +|+....   ...++...+++|+.++.++++++.+  .++ +|||+||.++  ||.....+++|+++.  ...| .+|..
T Consensus       122 ~A~~~~~---~~~~~~~~~~~n~~~~~~ll~a~~~--~~~-r~V~~SS~~v--~g~~~~~~~~E~~~~~p~~~Y~~sK~~  193 (357)
T 2x6t_A          122 EGACSST---TEWDGKYMMDNNYQYSKELLHYCLE--REI-PFLYASSAAT--YGGRTSDFIESREYEKPLNVFGYSKFL  193 (357)
T ss_dssp             CCSCCCT---TCCCHHHHHHHTHHHHHHHHHHHHH--HTC-CEEEEEEGGG--GCSCSSCCCSSGGGCCCSSHHHHHHHH
T ss_pred             CCcccCC---ccCCHHHHHHHHHHHHHHHHHHHHH--cCC-eEEEEcchHH--hCCCCCCCcCCcCCCCCCChhHHHHHH
Confidence            9997432   3345678899999999999999998  677 9999999998  987666677887654  3467 78888


Q ss_pred             HHHHHHHhccCCCCeEEEEEecEEEeCCCCc---ccchHHHH--HHHhCCCC---CCCCc-ceecccHHHHHHHHHHHHh
Q 018503          200 REWEGTALKVNKDVRLALIRIGIVLGKDGGA---LAKMIPLF--MMFAGGPL---GSGQQ-WFSWIHLDDIVNLIYEALS  270 (355)
Q Consensus       200 ~~~~~~~~~~~~~~~~~i~Rp~~i~G~~~~~---~~~~~~~~--~~~~~~~~---~~~~~-~~~~i~v~Dva~~~~~~~~  270 (355)
                      .|.....+..+.+++++++||+++||++...   ...++..+  ....+.++   ++++. .++++|++|+|++++.+++
T Consensus       194 ~E~~~~~~~~~~g~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~ai~~~~~  273 (357)
T 2x6t_A          194 FDEYVRQILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFLE  273 (357)
T ss_dssp             HHHHHHHHGGGCSSCEEEEEECEEESSSCTTCGGGSCHHHHHHHHHHTTCCCEEETTGGGCEECEEEHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHcCCCEEEEecCeEECCCCCCCcccchHHHHHHHHHHcCCCcEEeCCCCcceEccEEHHHHHHHHHHHHh
Confidence            8888877777779999999999999997532   12333332  33445443   56777 8999999999999999998


Q ss_pred             CCCCCCceEecCCCccCHHHHHHHHHHHhCCC-C-CCCCcHHHHHHHhcccceeeecCccccchhHHhCCC-CCCccCHH
Q 018503          271 NPSYRGVINGTAPNPVRLAEMCDHLGNVLGRP-S-WLPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGF-PFKYRYVK  347 (355)
Q Consensus       271 ~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~lG~-~p~~~~~~  347 (355)
                      .+. +++||+++++++|+.|+++.+.+.+|.+ . .++.|.+..        ........++++|++++|| .|.++ ++
T Consensus       274 ~~~-~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~--------~~~~~~~~~~~~k~~~lG~~~~~~~-l~  343 (357)
T 2x6t_A          274 NGV-SGIFNLGTGRAESFQAVADATLAYHKKGQIEYIPFPDKLK--------GRYQAFTQADLTNLRAAGYDKPFKT-VA  343 (357)
T ss_dssp             HCC-CEEEEESCSCCEEHHHHHHHHHHHHTCCCCEEECCCGGGT--------TSCCSBCCCCCHHHHHTTCCCCCCC-HH
T ss_pred             cCC-CCeEEecCCCcccHHHHHHHHHHHcCCCCceecCCCcccc--------cccccccccCHHHHHHcCCCCCCCC-HH
Confidence            776 7899999999999999999999999976 1 223333210        1122445677888888999 67775 99


Q ss_pred             HHHHHHh
Q 018503          348 DALKAIM  354 (355)
Q Consensus       348 ~~l~~~~  354 (355)
                      ++|++++
T Consensus       344 e~l~~~~  350 (357)
T 2x6t_A          344 EGVTEYM  350 (357)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            9999986

>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}

Probab=100.00  E-value=1.4e-38  Score=284.96  Aligned_cols=287  Identities=20%  Similarity=0.257  Sum_probs=217.6

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcC--CCcEEEECCCCCC
Q 018503           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ--GSTAVVNLAGTPI  128 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--~~d~vi~~a~~~~  128 (355)
                      |+|||||||||||++|+++|+++|++|++++|+...........  .....+|+.|.+.+.++++  ++|+|||+|+...
T Consensus         2 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~--~~~~~~D~~~~~~~~~~~~~~~~d~vih~a~~~~   79 (330)
T 2c20_A            2 NSILICGGAGYIGSHAVKKLVDEGLSVVVVDNLQTGHEDAITEG--AKFYNGDLRDKAFLRDVFTQENIEAVMHFAADSL   79 (330)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGSCTT--SEEEECCTTCHHHHHHHHHHSCEEEEEECCCCCC
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCcCchhhcCCC--cEEEECCCCCHHHHHHHHhhcCCCEEEECCcccC
Confidence            79999999999999999999999999999999765432211110  0134568889999999887  8999999999642


Q ss_pred             CCCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCCCCccccCCCCC--CChh-HHHHHHHHHHH
Q 018503          129 GTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPS--GNDY-LAEVCREWEGT  205 (355)
Q Consensus       129 ~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~--~~~y-~~k~~~~~~~~  205 (355)
                      . .....++...+++|+.++.++++++++  .++++|||+||.++  ||.....+++|+++.  ...| .+|...|....
T Consensus        80 ~-~~~~~~~~~~~~~n~~~~~~l~~a~~~--~~~~~~v~~Ss~~~--~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~  154 (330)
T 2c20_A           80 V-GVSMEKPLQYYNNNVYGALCLLEVMDE--FKVDKFIFSSTAAT--YGEVDVDLITEETMTNPTNTYGETKLAIEKMLH  154 (330)
T ss_dssp             H-HHHHHSHHHHHHHHHHHHHHHHHHHHH--TTCCEEEEECCGGG--GCSCSSSSBCTTSCCCCSSHHHHHHHHHHHHHH
T ss_pred             c-cccccCHHHHHHHHhHHHHHHHHHHHH--cCCCEEEEeCCcee--eCCCCCCCCCcCCCCCCCChHHHHHHHHHHHHH
Confidence            1 112345678889999999999999998  68899999999998  987767788888774  3567 77888888777


Q ss_pred             HhccCCCCeEEEEEecEEEeCCCC--------cccchHHHH-HHHhC--CCC---C------CCCcceecccHHHHHHHH
Q 018503          206 ALKVNKDVRLALIRIGIVLGKDGG--------ALAKMIPLF-MMFAG--GPL---G------SGQQWFSWIHLDDIVNLI  265 (355)
Q Consensus       206 ~~~~~~~~~~~i~Rp~~i~G~~~~--------~~~~~~~~~-~~~~~--~~~---~------~~~~~~~~i~v~Dva~~~  265 (355)
                      .+..+.+++++++||+++||+...        ....+++.+ ....+  .++   +      ++++.++++|++|+|+++
T Consensus       155 ~~~~~~~~~~~ilrp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~v~v~Dva~a~  234 (330)
T 2c20_A          155 WYSQASNLRYKIFRYFNVAGATPNGIIGEDHRPETHLIPLVLQVALGQREKIMMFGDDYNTPDGTCIRDYIHVEDLVAAH  234 (330)
T ss_dssp             HHHHTSSCEEEEEECSEEECCCTTCSSCCCCSSCCSHHHHHHHHHTTSSSCEEEECSCCSSSSSSCEECEEEHHHHHHHH
T ss_pred             HHHHHhCCcEEEEecCcccCCCCcCccccccccccchHHHHHHHHhhcCCCeEEeCCccccCCCceeEeeEeHHHHHHHH
Confidence            777667999999999999999631        122344443 22222  222   2      577889999999999999


Q ss_pred             HHHHhCCC---CCCceEecCCCccCHHHHHHHHHHHhCCCCCC-CCcHHHHHHHhcccceeeecCccccchhHH-hCCCC
Q 018503          266 YEALSNPS---YRGVINGTAPNPVRLAEMCDHLGNVLGRPSWL-PVPEFALKAVLGEGAFVVLEGQRVVPARAK-ELGFP  340 (355)
Q Consensus       266 ~~~~~~~~---~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~-~lG~~  340 (355)
                      +.+++.+.   .+++||+++++++|+.|+++.+.+.+|.+..+ ..|.     ..++.     ....++++|++ .|||+
T Consensus       235 ~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~-----~~~~~-----~~~~~d~~k~~~~lG~~  304 (330)
T 2c20_A          235 FLGLKDLQNGGESDFYNLGNGNGFSVKEIVDAVREVTNHEIPAEVAPR-----RAGDP-----ARLVASSQKAKEKLGWD  304 (330)
T ss_dssp             HHHHHHHHTTCCCEEEECCCTTCBCHHHHHHHHHHHTTSCCCEEEECC-----CSSCC-----SEECBCCHHHHHHHCCC
T ss_pred             HHHHhccccCCCCCeEEeCCCCCccHHHHHHHHHHHhCCCCceeeCCC-----CCCcc-----cccccCHHHHHHHhCCC
Confidence            99997542   35799999999999999999999999976322 1111     01111     23456777885 59999


Q ss_pred             CCccCHHHHHHHHh
Q 018503          341 FKYRYVKDALKAIM  354 (355)
Q Consensus       341 p~~~~~~~~l~~~~  354 (355)
                      |++++++++|++++
T Consensus       305 p~~~~l~~~l~~~~  318 (330)
T 2c20_A          305 PRYVNVKTIIEHAW  318 (330)
T ss_dssp             CSCCCHHHHHHHHH
T ss_pred             CccCCHHHHHHHHH
Confidence            99945999999886

>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}

Probab=100.00  E-value=2e-38  Score=284.57  Aligned_cols=290  Identities=18%  Similarity=0.174  Sum_probs=213.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCC--CeEEEEecCCch--hhccCCC--CCCccCCCeeecCCcchhhhcCCCcEEEE
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADN--HQVRVLTRSRSK--AELIFPG--KKTRFFPGVMIAEEPQWRDCIQGSTAVVN  122 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~--~~~~~~~--~~~~~~~~~d~~~~~~~~~~~~~~d~vi~  122 (355)
                      ++|+||||||+||||++|+++|+++|  ++|++++|+...  ...+...  ........+|+.|.+.+.+++.++|+|||
T Consensus         2 ~~m~vlVTGatG~iG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih   81 (336)
T 2hun_A            2 HSMKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDKLGYGSNPANLKDLEDDPRYTFVKGDVADYELVKELVRKVDGVVH   81 (336)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHTCSEEEE
T ss_pred             CCCeEEEECCCchHHHHHHHHHHHhCCCCEEEEEecCcccCchhHHhhhccCCceEEEEcCCCCHHHHHHHhhCCCEEEE
Confidence            34799999999999999999999986  999999997521  1211111  00001234688899999999999999999


Q ss_pred             CCCCCCCCCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCC-CcEEEEeeeeeeeeCCCCCccccCCCCC--CChh-HHHH
Q 018503          123 LAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGV-RPSVLVSATALGYYGTSETEVFDESSPS--GNDY-LAEV  198 (355)
Q Consensus       123 ~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~-~~~v~~Ss~~~~~yg~~~~~~~~e~~~~--~~~y-~~k~  198 (355)
                      +|+.... .....++..++++|+.++.++++++..  .+. ++|||+||.++  ||.....+++|+++.  ...| .+|.
T Consensus        82 ~A~~~~~-~~~~~~~~~~~~~Nv~g~~~l~~a~~~--~~~~~~iv~~SS~~v--yg~~~~~~~~E~~~~~~~~~Y~~sK~  156 (336)
T 2hun_A           82 LAAESHV-DRSISSPEIFLHSNVIGTYTLLESIRR--ENPEVRFVHVSTDEV--YGDILKGSFTENDRLMPSSPYSATKA  156 (336)
T ss_dssp             CCCCCCH-HHHHHCTHHHHHHHHHHHHHHHHHHHH--HCTTSEEEEEEEGGG--GCCCSSSCBCTTBCCCCCSHHHHHHH
T ss_pred             CCCCcCh-hhhhhCHHHHHHHHHHHHHHHHHHHHH--hCCCcEEEEeccHHH--HCCCCCCCcCCCCCCCCCCccHHHHH
Confidence            9996421 112344567899999999999999988  443 79999999998  987666678887654  4567 7888


Q ss_pred             HHHHHHHHhccCCCCeEEEEEecEEEeCCCCcccchHHHH--HHHhCCCC---CCCCcceecccHHHHHHHHHHHHhCCC
Q 018503          199 CREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLF--MMFAGGPL---GSGQQWFSWIHLDDIVNLIYEALSNPS  273 (355)
Q Consensus       199 ~~~~~~~~~~~~~~~~~~i~Rp~~i~G~~~~~~~~~~~~~--~~~~~~~~---~~~~~~~~~i~v~Dva~~~~~~~~~~~  273 (355)
                      ..|.....+..+.+++++++||+.+||+..... .+.+.+  ....+.++   +++++.++++|++|+|++++.+++.+.
T Consensus       157 ~~e~~~~~~~~~~~~~~~ilrp~~v~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~  235 (336)
T 2hun_A          157 ASDMLVLGWTRTYNLNASITRCTNNYGPYQFPE-KLIPKTIIRASLGLKIPIYGTGKNVRDWLYVEDHVRAIELVLLKGE  235 (336)
T ss_dssp             HHHHHHHHHHHHTTCEEEEEEECEEESTTCCTT-SHHHHHHHHHHTTCCEEEETC---CEEEEEHHHHHHHHHHHHHHCC
T ss_pred             HHHHHHHHHHHHhCCCEEEEeeeeeeCcCCCcC-chHHHHHHHHHcCCCceEeCCCCceeeeEEHHHHHHHHHHHHhCCC
Confidence            888877777766799999999999999975321 233322  33444443   677788999999999999999998765


Q ss_pred             CCCceEecCCCccCHHHHHHHHHHHhCCCCC-CCCcHHHHHHHhcccceeeecCccccchhHHh-CCCCCCccCHHHHHH
Q 018503          274 YRGVINGTAPNPVRLAEMCDHLGNVLGRPSW-LPVPEFALKAVLGEGAFVVLEGQRVVPARAKE-LGFPFKYRYVKDALK  351 (355)
Q Consensus       274 ~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~-lG~~p~~~~~~~~l~  351 (355)
                      .+++||+++++++|+.|+++.+.+.+|.+.. +.....    ..+.     .....++++|+++ +||+|+++ ++++|+
T Consensus       236 ~g~~~~v~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~----~~~~-----~~~~~~d~~k~~~~lG~~p~~~-~~~~l~  305 (336)
T 2hun_A          236 SREIYNISAGEEKTNLEVVKIILRLMGKGEELIELVED----RPGH-----DLRYSLDSWKITRDLKWRPKYT-FDEGIK  305 (336)
T ss_dssp             TTCEEEECCSCEECHHHHHHHHHHHTTCCSTTEEEECC----CTTC-----CCCCCBCCHHHHHHHCCCCSSC-HHHHHH
T ss_pred             CCCEEEeCCCCcccHHHHHHHHHHHhCCCcccccccCC----CCCc-----hhhhcCCHHHHHHHhCCCCCCC-HHHHHH
Confidence            6679999999999999999999999997621 111000    0011     1223567888865 99999996 999999


Q ss_pred             HHh
Q 018503          352 AIM  354 (355)
Q Consensus       352 ~~~  354 (355)
                      +++
T Consensus       306 ~~~  308 (336)
T 2hun_A          306 KTI  308 (336)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            886

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*

Probab=100.00  E-value=1.3e-38  Score=288.16  Aligned_cols=293  Identities=18%  Similarity=0.203  Sum_probs=215.6

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCC---CCCCccCCCeeecCCcchhhhcCC--CcEEEE
Q 018503           48 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP---GKKTRFFPGVMIAEEPQWRDCIQG--STAVVN  122 (355)
Q Consensus        48 ~~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~---~~~~~~~~~~d~~~~~~~~~~~~~--~d~vi~  122 (355)
                      +.+|+||||||+||||++|+++|++.|++|++++|+.........   .........+|+.|++.+.+++++  +|+|||
T Consensus         7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih   86 (357)
T 1rkx_A            7 WQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQNKLLESIREFQPEIVFH   86 (357)
T ss_dssp             HTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTCHHHHHHHHHHHCCSEEEE
T ss_pred             hCCCEEEEECCCchHHHHHHHHHHhCCCeEEEEeCCCcccchhhHhhccCCceEEEEccccCHHHHHHHHHhcCCCEEEE
Confidence            345899999999999999999999999999999998755332110   000001345788899999888875  899999


Q ss_pred             CCCCCCCCCCChhhHHHHHHHhhhhHHHHHHHHHcCCCC-CCcEEEEeeeeeeeeCCCCC-ccccCCCC--CCChh-HHH
Q 018503          123 LAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEG-VRPSVLVSATALGYYGTSET-EVFDESSP--SGNDY-LAE  197 (355)
Q Consensus       123 ~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~-~~~~v~~Ss~~~~~yg~~~~-~~~~e~~~--~~~~y-~~k  197 (355)
                      +|+... .......+...+++|+.++.++++++.+  .+ +++|||+||.++  ||.... .+++|+++  +...| .+|
T Consensus        87 ~A~~~~-~~~~~~~~~~~~~~n~~~~~~l~~a~~~--~~~~~~~v~~SS~~v--yg~~~~~~~~~E~~~~~~~~~Y~~sK  161 (357)
T 1rkx_A           87 MAAQPL-VRLSYSEPVETYSTNVMGTVYLLEAIRH--VGGVKAVVNITSDKC--YDNKEWIWGYRENEAMGGYDPYSNSK  161 (357)
T ss_dssp             CCSCCC-HHHHHHCHHHHHHHHTHHHHHHHHHHHH--HCCCCEEEEECCGGG--BCCCCSSSCBCTTSCBCCSSHHHHHH
T ss_pred             CCCCcc-cccchhCHHHHHHHHHHHHHHHHHHHHH--hCCCCeEEEecCHHH--hCCCCcCCCCCCCCCCCCCCccHHHH
Confidence            999631 1222445678899999999999999988  44 789999999998  986543 35666655  34567 778


Q ss_pred             HHHHHHHHHhccCC---------CCeEEEEEecEEEeCCCCcccchHHHH--HHHhCCCC--CCCCcceecccHHHHHHH
Q 018503          198 VCREWEGTALKVNK---------DVRLALIRIGIVLGKDGGALAKMIPLF--MMFAGGPL--GSGQQWFSWIHLDDIVNL  264 (355)
Q Consensus       198 ~~~~~~~~~~~~~~---------~~~~~i~Rp~~i~G~~~~~~~~~~~~~--~~~~~~~~--~~~~~~~~~i~v~Dva~~  264 (355)
                      ...|.....+..+.         +++++++||+.+||++......+++.+  ....+.++  ..++..++|+|++|+|++
T Consensus       162 ~~~e~~~~~~~~~~~~~~~~~~~gi~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~v~v~Dva~a  241 (357)
T 1rkx_A          162 GCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWALDRIVPDILRAFEQSQPVIIRNPHAIRPWQHVLEPLSG  241 (357)
T ss_dssp             HHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCCSSCHHHHHHHHHHTTCCEECSCTTCEECCEETHHHHHH
T ss_pred             HHHHHHHHHHHHHHhhhhccccCCceEEEEeeceeeCCCCCccccHHHHHHHHHhcCCCEEECCCCCeeccEeHHHHHHH
Confidence            77777766655432         899999999999999763322344333  33345543  556788999999999999


Q ss_pred             HHHHHhC----C-CCCCceEecCC--CccCHHHHHHHHHHHhCCCCCCCCcHHHHHHHhcccceeeecCccccchhHHh-
Q 018503          265 IYEALSN----P-SYRGVINGTAP--NPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKE-  336 (355)
Q Consensus       265 ~~~~~~~----~-~~~~~~~i~~~--~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~-  336 (355)
                      ++.++..    + ..+++||++++  +++|+.|+++.+.+.+|.+..+..+... .  ..     ......++++|+++ 
T Consensus       242 ~~~~~~~~~~~~~~~~~~~ni~~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~-~--~~-----~~~~~~~d~~k~~~~  313 (357)
T 1rkx_A          242 YLLLAQKLYTDGAEYAEGWNFGPNDADATPVKNIVEQMVKYWGEGASWQLDGNA-H--PH-----EAHYLKLDCSKAKMQ  313 (357)
T ss_dssp             HHHHHHHHHHTCGGGCSEEECCCCGGGCEEHHHHHHHHHHHHCTTCCEEC---------------CCCCCCBCCHHHHHH
T ss_pred             HHHHHHhhhhcCCCCCceEEECCCCCCcccHHHHHHHHHHHhCCCCccccCCCC-C--Cc-----CcccccCCHHHHHHH
Confidence            9999874    2 34679999974  6899999999999999987444333211 1  11     12455688888965 


Q ss_pred             CCCCCCccCHHHHHHHHh
Q 018503          337 LGFPFKYRYVKDALKAIM  354 (355)
Q Consensus       337 lG~~p~~~~~~~~l~~~~  354 (355)
                      |||+|+++ ++++|++++
T Consensus       314 lG~~p~~~-l~e~l~~~~  330 (357)
T 1rkx_A          314 LGWHPRWN-LNTTLEYIV  330 (357)
T ss_dssp             HCCCCCCC-HHHHHHHHH
T ss_pred             hCCCcCCc-HHHHHHHHH
Confidence            99999996 999999886

>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2

Probab=100.00  E-value=6.2e-38  Score=278.24  Aligned_cols=280  Identities=14%  Similarity=0.166  Sum_probs=203.3

Q ss_pred             EEEEEcCCchHHHHHHHHHHhCC-CeEEEEecCCchhh--ccCCCCCCccCCCeeecCCcchhhhcCC-----CcEEEEC
Q 018503           52 TVSVTGATGFIGRRLVQRLQADN-HQVRVLTRSRSKAE--LIFPGKKTRFFPGVMIAEEPQWRDCIQG-----STAVVNL  123 (355)
Q Consensus        52 ~IlVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~--~~~~~~~~~~~~~~d~~~~~~~~~~~~~-----~d~vi~~  123 (355)
                      +|||||||||||++|+++|+++| ++|++++|+.....  .+...     ....|+.|.+.+.+++++     +|+|||+
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~-----~~~~d~~~~~~~~~~~~~~~~~~~d~vi~~   75 (310)
T 1eq2_A            1 MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLVDL-----NIADYMDKEDFLIQIMAGEEFGDVEAIFHE   75 (310)
T ss_dssp             CEEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGGGHHHHTS-----CCSEEEEHHHHHHHHHTTCCCSSCCEEEEC
T ss_pred             CEEEEcCccHHHHHHHHHHHHCCCcEEEEEccCCCCchhhhcCcc-----eeccccccHHHHHHHHhccccCCCcEEEEC
Confidence            59999999999999999999999 99999999876431  11110     134788888889888875     9999999


Q ss_pred             CCCCCCCCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCCCCccccCCCCC--CChh-HHHHHH
Q 018503          124 AGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPS--GNDY-LAEVCR  200 (355)
Q Consensus       124 a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~--~~~y-~~k~~~  200 (355)
                      |+....   ...++...+++|+.++.++++++.+  .++ ++||+||.++  ||.....+++|+++.  ...| .+|...
T Consensus        76 a~~~~~---~~~~~~~~~~~n~~~~~~l~~a~~~--~~~-~~v~~SS~~v--~g~~~~~~~~E~~~~~p~~~Y~~sK~~~  147 (310)
T 1eq2_A           76 GACSST---TEWDGKYMMDNNYQYSKELLHYCLE--REI-PFLYASSAAT--YGGRTSDFIESREYEKPLNVYGYSKFLF  147 (310)
T ss_dssp             CSCCCT---TCCCHHHHHHHTHHHHHHHHHHHHH--HTC-CEEEEEEGGG--GTTCCSCBCSSGGGCCCSSHHHHHHHHH
T ss_pred             cccccC---cccCHHHHHHHHHHHHHHHHHHHHH--cCC-eEEEEeeHHH--hCCCCCCCCCCCCCCCCCChhHHHHHHH
Confidence            997432   3345678899999999999999998  677 9999999998  987666677787654  3467 778888


Q ss_pred             HHHHHHhccCCCCeEEEEEecEEEeCCCCc---ccchHHHH--HHHhCCC---CCCCCc-ceecccHHHHHHHHHHHHhC
Q 018503          201 EWEGTALKVNKDVRLALIRIGIVLGKDGGA---LAKMIPLF--MMFAGGP---LGSGQQ-WFSWIHLDDIVNLIYEALSN  271 (355)
Q Consensus       201 ~~~~~~~~~~~~~~~~i~Rp~~i~G~~~~~---~~~~~~~~--~~~~~~~---~~~~~~-~~~~i~v~Dva~~~~~~~~~  271 (355)
                      |.....+..+.+++++++||+++||+....   ...+++.+  ....+.+   +++++. .++++|++|+|++++.++++
T Consensus       148 e~~~~~~~~~~g~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~i~v~Dva~~~~~~~~~  227 (310)
T 1eq2_A          148 DEYVRQILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFLEN  227 (310)
T ss_dssp             HHHHHHHGGGCSSCEEEEEECEEESSSCGGGGGGSCHHHHHHHHHHC-------------CBCEEEHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHcCCCEEEEeCCcEECcCCCCCCccchHHHHHHHHHHcCCCcEEecCCCcceEccEEHHHHHHHHHHHHhc
Confidence            888777777779999999999999997542   12233322  3334443   256778 89999999999999999988


Q ss_pred             CCCCCceEecCCCccCHHHHHHHHHHHhCCC--CCCCCcHHHHHHHhcccceeeecCccccchhHHhCCC-CCCccCHHH
Q 018503          272 PSYRGVINGTAPNPVRLAEMCDHLGNVLGRP--SWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGF-PFKYRYVKD  348 (355)
Q Consensus       272 ~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~lG~-~p~~~~~~~  348 (355)
                      +. +++||+++++++|+.|+++.+.+.+|.+  ...+.|.+..        ........++++|++++|| .|.++ +++
T Consensus       228 ~~-~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~lG~~~~~~~-l~~  297 (310)
T 1eq2_A          228 GV-SGIFNLGTGRAESFQAVADATLAYHKKGQIEYIPFPDKLK--------GRYQAFTQADLTNLRAAGYDKPFKT-VAE  297 (310)
T ss_dssp             CC-CEEEEESCSCCBCHHHHHHHC-----------------------------CCCSCCBCCHHHHHTTCCCCCCC-HHH
T ss_pred             CC-CCeEEEeCCCccCHHHHHHHHHHHcCCCCceeCCCChhhh--------cccccccccchHHHHhcCCCCCCCC-HHH
Confidence            76 7899999999999999999999999976  1122222110        1122456677888988999 67775 999


Q ss_pred             HHHHHh
Q 018503          349 ALKAIM  354 (355)
Q Consensus       349 ~l~~~~  354 (355)
                      +|++++
T Consensus       298 ~l~~~~  303 (310)
T 1eq2_A          298 GVTEYM  303 (310)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            999986

>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}

Probab=100.00  E-value=7.9e-39  Score=285.35  Aligned_cols=282  Identities=18%  Similarity=0.197  Sum_probs=207.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCe-eecCCcchhhhcCCCcEEEECCCCC
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGV-MIAEEPQWRDCIQGSTAVVNLAGTP  127 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~-d~~~~~~~~~~~~~~d~vi~~a~~~  127 (355)
                      ++|+|||||||||||++|+++|+++|++|++++|+..........     .... +....+.+..-+.++|+|||+|+..
T Consensus         6 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-----~~~~~~~~~~~~~~~Dl~~~d~vi~~a~~~   80 (321)
T 3vps_A            6 LKHRILITGGAGFIGGHLARALVASGEEVTVLDDLRVPPMIPPEG-----TGKFLEKPVLELEERDLSDVRLVYHLASHK   80 (321)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSSCCSSCCTT-----SSEEECSCGGGCCHHHHTTEEEEEECCCCC
T ss_pred             CCCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcccccchhh-----hhhhccCCCeeEEeCccccCCEEEECCccC
Confidence            468999999999999999999999999999999987621111110     0000 0001112222233899999999975


Q ss_pred             CCCCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCCCCccccCCCCC--CChh-HHHHHHHHHH
Q 018503          128 IGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPS--GNDY-LAEVCREWEG  204 (355)
Q Consensus       128 ~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~--~~~y-~~k~~~~~~~  204 (355)
                      .. ......+...++ |+.++.++++++++  .++++|||+||.++  ||.....+++|+++.  ...| .+|...|...
T Consensus        81 ~~-~~~~~~~~~~~~-n~~~~~~ll~a~~~--~~v~~~v~~SS~~v--~~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~  154 (321)
T 3vps_A           81 SV-PRSFKQPLDYLD-NVDSGRHLLALCTS--VGVPKVVVGSTCEV--YGQADTLPTPEDSPLSPRSPYAASKVGLEMVA  154 (321)
T ss_dssp             CH-HHHTTSTTTTHH-HHHHHHHHHHHHHH--HTCCEEEEEEEGGG--GCSCSSSSBCTTSCCCCCSHHHHHHHHHHHHH
T ss_pred             Ch-HHHHhCHHHHHH-HHHHHHHHHHHHHH--cCCCeEEEecCHHH--hCCCCCCCCCCCCCCCCCChhHHHHHHHHHHH
Confidence            32 111122334566 99999999999999  68899999999999  998877788888775  3567 7888888888


Q ss_pred             HHhccCCCC-eEEEEEecEEEeCCCCcccchHHHH--HHHhCCCC---CCCCcceecccHHHHHHHHHHHHhCCCCCCce
Q 018503          205 TALKVNKDV-RLALIRIGIVLGKDGGALAKMIPLF--MMFAGGPL---GSGQQWFSWIHLDDIVNLIYEALSNPSYRGVI  278 (355)
Q Consensus       205 ~~~~~~~~~-~~~i~Rp~~i~G~~~~~~~~~~~~~--~~~~~~~~---~~~~~~~~~i~v~Dva~~~~~~~~~~~~~~~~  278 (355)
                      ..+..++++ +++++||+.+||++.... .+++.+  ....+.++   ++++..++++|++|+|++++.++..+..+ +|
T Consensus       155 ~~~~~~~~~~~~~ilRp~~v~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~g-~~  232 (321)
T 3vps_A          155 GAHQRASVAPEVGIVRFFNVYGPGERPD-ALVPRLCANLLTRNELPVEGDGEQRRDFTYITDVVDKLVALANRPLPS-VV  232 (321)
T ss_dssp             HHHHHSSSSCEEEEEEECEEECTTCCTT-SHHHHHHHHHHHHSEEEEETTSCCEECEEEHHHHHHHHHHGGGSCCCS-EE
T ss_pred             HHHHHHcCCCceEEEEeccccCcCCCCC-ChHHHHHHHHHcCCCeEEeCCCCceEceEEHHHHHHHHHHHHhcCCCC-eE
Confidence            887777899 999999999999986542 223322  33344442   67889999999999999999999988764 99


Q ss_pred             EecCCCccCHHHHHHHHHHHhCCCCCC-CCcHHHHHHHhcccceeeecCccccchhHHh-CCCCC-CccCHHHHHHHHhC
Q 018503          279 NGTAPNPVRLAEMCDHLGNVLGRPSWL-PVPEFALKAVLGEGAFVVLEGQRVVPARAKE-LGFPF-KYRYVKDALKAIMS  355 (355)
Q Consensus       279 ~i~~~~~~s~~el~~~i~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~-lG~~p-~~~~~~~~l~~~~~  355 (355)
                      |+++++++|+.|+++.+. .+|.+..+ ..|...     .     ......++++|+++ +||+| +++ ++++|+++++
T Consensus       233 ~i~~~~~~s~~e~~~~i~-~~g~~~~~~~~~~~~-----~-----~~~~~~~d~~k~~~~lG~~p~~~~-~~~~l~~~~~  300 (321)
T 3vps_A          233 NFGSGQSLSVNDVIRILQ-ATSPAAEVARKQPRP-----N-----EITEFRADTALQTRQIGERSGGIG-IEEGIRLTLE  300 (321)
T ss_dssp             EESCSCCEEHHHHHHHHH-TTCTTCEEEEECCCT-----T-----CCSBCCBCCHHHHHHHCCCSCCCC-HHHHHHHHHH
T ss_pred             EecCCCcccHHHHHHHHH-HhCCCCccccCCCCC-----C-----CcceeeccHHHHHHHhCCCCCcCC-HHHHHHHHHH
Confidence            999999999999999999 99977322 222110     1     12456678888876 99999 775 9999998863

>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*

Probab=100.00  E-value=2.2e-38  Score=285.70  Aligned_cols=289  Identities=17%  Similarity=0.156  Sum_probs=214.6

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhC--CCeEEEEecCCchh--hccCCC-CCCccCCCeeecCCcchhhhcCCCcEEEECC
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQAD--NHQVRVLTRSRSKA--ELIFPG-KKTRFFPGVMIAEEPQWRDCIQGSTAVVNLA  124 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~--~~~~~~-~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a  124 (355)
                      +|+||||||+||||++|+++|+++  |++|++++|+....  ..+... ........+|+.|.+.+.++++++|+|||+|
T Consensus         4 m~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih~A   83 (348)
T 1oc2_A            4 FKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAILGDRVELVVGDIADAELVDKLAAKADAIVHYA   83 (348)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGGCSSSEEEEECCTTCHHHHHHHHTTCSEEEECC
T ss_pred             CcEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEeCCCCCCChhHHhhhccCCeEEEECCCCCHHHHHHHhhcCCEEEECC
Confidence            479999999999999999999998  89999999975321  111100 0000133468889999999999999999999


Q ss_pred             CCCCCCCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCCCC------------ccccCCCCC--
Q 018503          125 GTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSET------------EVFDESSPS--  190 (355)
Q Consensus       125 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~~------------~~~~e~~~~--  190 (355)
                      +.... .....++...+++|+.++.++++++.+  .++ +|||+||.++  ||....            .+++|+++.  
T Consensus        84 ~~~~~-~~~~~~~~~~~~~Nv~g~~~l~~a~~~--~~~-~~v~~SS~~v--yg~~~~~~~~~~~~~~~~~~~~E~~~~~~  157 (348)
T 1oc2_A           84 AESHN-DNSLNDPSPFIHTNFIGTYTLLEAARK--YDI-RFHHVSTDEV--YGDLPLREDLPGHGEGPGEKFTAETNYNP  157 (348)
T ss_dssp             SCCCH-HHHHHCCHHHHHHHTHHHHHHHHHHHH--HTC-EEEEEEEGGG--GCCBCCGGGSTTTTCSTTSSBCTTSCCCC
T ss_pred             cccCc-cchhhCHHHHHHHHHHHHHHHHHHHHH--hCC-eEEEecccce--eCCCcccccccccccccCCCcCCCCCCCC
Confidence            96421 112234567889999999999999998  566 9999999998  875432            567777653  


Q ss_pred             CChh-HHHHHHHHHHHHhccCCCCeEEEEEecEEEeCCCCcccchHHHH--HHHhCCCC---CCCCcceecccHHHHHHH
Q 018503          191 GNDY-LAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLF--MMFAGGPL---GSGQQWFSWIHLDDIVNL  264 (355)
Q Consensus       191 ~~~y-~~k~~~~~~~~~~~~~~~~~~~i~Rp~~i~G~~~~~~~~~~~~~--~~~~~~~~---~~~~~~~~~i~v~Dva~~  264 (355)
                      ...| .+|...|.....+..+.+++++++||+.+||+..... .+++.+  ....+.++   +.++..++++|++|+|++
T Consensus       158 ~~~Y~~sK~~~e~~~~~~~~~~gi~~~ilrp~~v~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~  236 (348)
T 1oc2_A          158 SSPYSSTKAASDLIVKAWVRSFGVKATISNCSNNYGPYQHIE-KFIPRQITNILAGIKPKLYGEGKNVRDWIHTNDHSTG  236 (348)
T ss_dssp             CSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEESTTCCTT-SHHHHHHHHHHHTCCCEEETTSCCEEECEEHHHHHHH
T ss_pred             CCccHHHHHHHHHHHHHHHHHhCCCEEEEeeceeeCCCCCcc-chHHHHHHHHHcCCCceEecCCCceEeeEEHHHHHHH
Confidence            4567 7788787777766666699999999999999975321 223222  33445543   677888999999999999


Q ss_pred             HHHHHhCCCCCCceEecCCCccCHHHHHHHHHHHhCCCCC-CCCcHHHHHHHhcccceeeecCccccchhHHh-CCCCCC
Q 018503          265 IYEALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSW-LPVPEFALKAVLGEGAFVVLEGQRVVPARAKE-LGFPFK  342 (355)
Q Consensus       265 ~~~~~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~-lG~~p~  342 (355)
                      ++.++..+..+++||+++++++|+.|+++.+.+.+|.+.. +.....    ..+.     .....++++|+++ |||+|+
T Consensus       237 ~~~~~~~~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~----~~~~-----~~~~~~d~~k~~~~lG~~p~  307 (348)
T 1oc2_A          237 VWAILTKGRMGETYLIGADGEKNNKEVLELILEKMGQPKDAYDHVTD----RAGH-----DLRYAIDASKLRDELGWTPQ  307 (348)
T ss_dssp             HHHHHHHCCTTCEEEECCSCEEEHHHHHHHHHHHTTCCTTCSEEECC----CTTC-----CCBCCBCCHHHHHHHCCCCS
T ss_pred             HHHHhhCCCCCCeEEeCCCCCCCHHHHHHHHHHHhCCCccccccCCC----CCCc-----ccccccCHHHHHHHcCCCCC
Confidence            9999987655679999999999999999999999997631 211100    0011     1223477888865 999999


Q ss_pred             ccCHHHHHHHHh
Q 018503          343 YRYVKDALKAIM  354 (355)
Q Consensus       343 ~~~~~~~l~~~~  354 (355)
                      +++++++|++++
T Consensus       308 ~~~~~~~l~~~~  319 (348)
T 1oc2_A          308 FTDFSEGLEETI  319 (348)
T ss_dssp             CCCHHHHHHHHH
T ss_pred             CCcHHHHHHHHH
Confidence            966999999876

>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*

Probab=100.00  E-value=5.3e-38  Score=282.00  Aligned_cols=288  Identities=22%  Similarity=0.265  Sum_probs=215.6

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhC---C---CeEEEEecCCch--hhccCC--CCCCccCCCeeecCCcchhhhcCCCcEE
Q 018503           51 MTVSVTGATGFIGRRLVQRLQAD---N---HQVRVLTRSRSK--AELIFP--GKKTRFFPGVMIAEEPQWRDCIQGSTAV  120 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~---g---~~V~~~~r~~~~--~~~~~~--~~~~~~~~~~d~~~~~~~~~~~~~~d~v  120 (355)
                      |+|||||||||||++|+++|+++   |   ++|++++|+...  ...+..  .........+|+.|++.+.+++.++|+|
T Consensus         1 M~vlVTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~V   80 (337)
T 1r6d_A            1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVHGDIRDAGLLARELRGVDAI   80 (337)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGGGGTTCTTEEEEECCTTCHHHHHHHTTTCCEE
T ss_pred             CeEEEECCccHHHHHHHHHHHhhhcCCCCceEEEEEECCCccCchhhhhhcccCCCeEEEEcCCCCHHHHHHHhcCCCEE
Confidence            68999999999999999999997   8   999999996531  111110  0000013346888999999999999999


Q ss_pred             EECCCCCCCCCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCCCCccccCCCCC--CChh-HHH
Q 018503          121 VNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPS--GNDY-LAE  197 (355)
Q Consensus       121 i~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~--~~~y-~~k  197 (355)
                      ||+|+.... .....++...+++|+.++.++++++.+  .++++|||+||.++  ||...+.+++|+.+.  ...| .+|
T Consensus        81 ih~A~~~~~-~~~~~~~~~~~~~Nv~~~~~l~~a~~~--~~~~~~v~~SS~~v--yg~~~~~~~~E~~~~~~~~~Y~~sK  155 (337)
T 1r6d_A           81 VHFAAESHV-DRSIAGASVFTETNVQGTQTLLQCAVD--AGVGRVVHVSTNQV--YGSIDSGSWTESSPLEPNSPYAASK  155 (337)
T ss_dssp             EECCSCCCH-HHHHHCCHHHHHHHTHHHHHHHHHHHH--TTCCEEEEEEEGGG--GCCCSSSCBCTTSCCCCCSHHHHHH
T ss_pred             EECCCccCc-hhhhhCHHHHHHHHHHHHHHHHHHHHH--cCCCEEEEecchHH--hCCCCCCCCCCCCCCCCCCchHHHH
Confidence            999996421 112234567889999999999999999  68889999999998  987666677887654  4567 778


Q ss_pred             HHHHHHHHHhccCCCCeEEEEEecEEEeCCCCcccchHHHH--HHHhCCCC---CCCCcceecccHHHHHHHHHHHHhCC
Q 018503          198 VCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLF--MMFAGGPL---GSGQQWFSWIHLDDIVNLIYEALSNP  272 (355)
Q Consensus       198 ~~~~~~~~~~~~~~~~~~~i~Rp~~i~G~~~~~~~~~~~~~--~~~~~~~~---~~~~~~~~~i~v~Dva~~~~~~~~~~  272 (355)
                      ...|.....+..+.+++++++||+++||+..... .+++.+  ....+.++   +++++.++++|++|+|++++.++..+
T Consensus       156 ~~~e~~~~~~~~~~g~~~~ilrp~~v~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~  234 (337)
T 1r6d_A          156 AGSDLVARAYHRTYGLDVRITRCCNNYGPYQHPE-KLIPLFVTNLLDGGTLPLYGDGANVREWVHTDDHCRGIALVLAGG  234 (337)
T ss_dssp             HHHHHHHHHHHHHHCCCEEEEEECEEECTTCCTT-SHHHHHHHHHHTTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHHHCCCEEEEEeeeeECCCCCCC-ChHHHHHHHHhcCCCcEEeCCCCeeEeeEeHHHHHHHHHHHHhCC
Confidence            8777777766666689999999999999975321 233322  33445443   67788899999999999999999876


Q ss_pred             CCCCceEecCCCccCHHHHHHHHHHHhCCCCC-CCCcHHHHHHHhcccceeeecCccccchhHHh-CCCCCCccCHHHHH
Q 018503          273 SYRGVINGTAPNPVRLAEMCDHLGNVLGRPSW-LPVPEFALKAVLGEGAFVVLEGQRVVPARAKE-LGFPFKYRYVKDAL  350 (355)
Q Consensus       273 ~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~-lG~~p~~~~~~~~l  350 (355)
                      ..+++||+++++++|+.|+++.+.+.+|.+.. +.....    ..+.     .....++++|+++ +||+|+++ ++++|
T Consensus       235 ~~g~~~~v~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~----~~~~-----~~~~~~d~~k~~~~lG~~p~~~-~~e~l  304 (337)
T 1r6d_A          235 RAGEIYHIGGGLELTNRELTGILLDSLGADWSSVRKVAD----RKGH-----DLRYSLDGGKIERELGYRPQVS-FADGL  304 (337)
T ss_dssp             CTTCEEEECCCCEEEHHHHHHHHHHHHTCCGGGEEEECC----CTTC-----CCBCCBCCHHHHHHHCCCCCSC-HHHHH
T ss_pred             CCCCEEEeCCCCCccHHHHHHHHHHHhCCCcccceecCC----CCCC-----cceeecCHHHHHHHcCCCCCCC-HHHHH
Confidence            55679999999999999999999999997621 111000    0011     1123467888864 99999997 99999


Q ss_pred             HHHh
Q 018503          351 KAIM  354 (355)
Q Consensus       351 ~~~~  354 (355)
                      ++++
T Consensus       305 ~~~~  308 (337)
T 1r6d_A          305 ARTV  308 (337)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            9886

>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=100.00  E-value=1.3e-38  Score=285.65  Aligned_cols=293  Identities=15%  Similarity=0.125  Sum_probs=216.4

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhh----ccCCCCCCccCCCeeecCCcchhhhcCC--CcEEE
Q 018503           48 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAE----LIFPGKKTRFFPGVMIAEEPQWRDCIQG--STAVV  121 (355)
Q Consensus        48 ~~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~----~~~~~~~~~~~~~~d~~~~~~~~~~~~~--~d~vi  121 (355)
                      .++|+|||||||||||++|+++|+++|++|++++|+.....    .............+|+.|.+++.+++++  +|+||
T Consensus        12 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vi   91 (335)
T 1rpn_A           12 SMTRSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMADACSVQRAVIKAQPQEVY   91 (335)
T ss_dssp             ---CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHTTCGGGEEEEECCTTCHHHHHHHHHHHCCSEEE
T ss_pred             ccCCeEEEECCCChHHHHHHHHHHHCCCeEEEEeCCCccccccchhhccccCceEEEECCCCCHHHHHHHHHHcCCCEEE
Confidence            34589999999999999999999999999999999875421    0000000001334688888899888874  79999


Q ss_pred             ECCCCCCCCCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCC-CcEEEEeeeeeeeeCCCCCccccCCCCCC--Chh-HHH
Q 018503          122 NLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGV-RPSVLVSATALGYYGTSETEVFDESSPSG--NDY-LAE  197 (355)
Q Consensus       122 ~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~-~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~--~~y-~~k  197 (355)
                      |+|+.... .....++...+++|+.++.++++++.+  .++ ++|||+||.++  ||.....+++|+++..  ..| .+|
T Consensus        92 h~A~~~~~-~~~~~~~~~~~~~n~~~~~~l~~a~~~--~~~~~~~v~~SS~~v--~g~~~~~~~~E~~~~~p~~~Y~~sK  166 (335)
T 1rpn_A           92 NLAAQSFV-GASWNQPVTTGVVDGLGVTHLLEAIRQ--FSPETRFYQASTSEM--FGLIQAERQDENTPFYPRSPYGVAK  166 (335)
T ss_dssp             ECCSCCCH-HHHTTSHHHHHHHHTHHHHHHHHHHHH--HCTTSEEEEEEEGGG--GCSCSSSSBCTTSCCCCCSHHHHHH
T ss_pred             ECccccch-hhhhhChHHHHHHHHHHHHHHHHHHHH--hCCCCeEEEEeCHHH--hCCCCCCCCCcccCCCCCChhHHHH
Confidence            99996421 111334678889999999999999998  565 89999999998  9877667888887654  467 778


Q ss_pred             HHHHHHHHHhccCCCCeEEEEEecEEEeCCCCc--ccchHH-HH-HHHhCCC----CCCCCcceecccHHHHHHHHHHHH
Q 018503          198 VCREWEGTALKVNKDVRLALIRIGIVLGKDGGA--LAKMIP-LF-MMFAGGP----LGSGQQWFSWIHLDDIVNLIYEAL  269 (355)
Q Consensus       198 ~~~~~~~~~~~~~~~~~~~i~Rp~~i~G~~~~~--~~~~~~-~~-~~~~~~~----~~~~~~~~~~i~v~Dva~~~~~~~  269 (355)
                      ...|.....+..+.+++++++||+++||++...  ....+. .+ ....+..    ++++++.++++|++|+|++++.++
T Consensus       167 ~~~e~~~~~~~~~~~~~~~i~r~~~v~Gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~g~~~~~~i~v~Dva~a~~~~~  246 (335)
T 1rpn_A          167 LYGHWITVNYRESFGLHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKRDWGFAGDYVEAMWLML  246 (335)
T ss_dssp             HHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEEECEEHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHcCCcEEEEeeCcccCCCCCCCcchHHHHHHHHHHHcCCCceEEeCCCcceeceEEHHHHHHHHHHHH
Confidence            878777777666668999999999999997532  112222 22 3334442    267789999999999999999999


Q ss_pred             hCCCCCCceEecCCCccCHHHHHHHHHHHhCCCCC--CCCcHHHHHHHhcccceeeecCccccchhHH-hCCCCCCccCH
Q 018503          270 SNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSW--LPVPEFALKAVLGEGAFVVLEGQRVVPARAK-ELGFPFKYRYV  346 (355)
Q Consensus       270 ~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~-~lG~~p~~~~~  346 (355)
                      +++. .++||+++++++|+.|+++.+.+.+|.+..  ++++...    ...   .......++++|++ .|||+|+++ +
T Consensus       247 ~~~~-~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~----~~~---~~~~~~~~d~~k~~~~lG~~p~~~-l  317 (335)
T 1rpn_A          247 QQDK-ADDYVVATGVTTTVRDMCQIAFEHVGLDYRDFLKIDPAF----FRP---AEVDVLLGNPAKAQRVLGWKPRTS-L  317 (335)
T ss_dssp             HSSS-CCCEEECCSCEEEHHHHHHHHHHTTTCCGGGTEEECGGG----CCS---SCCCBCCBCTHHHHHHHCCCCCSC-H
T ss_pred             hcCC-CCEEEEeCCCCccHHHHHHHHHHHhCCCccccccccccc----cCC---CcchhhcCCHHHHHHhcCCCcCCC-H
Confidence            9865 589999999999999999999999997621  1221110    000   01123456788886 499999996 9


Q ss_pred             HHHHHHHh
Q 018503          347 KDALKAIM  354 (355)
Q Consensus       347 ~~~l~~~~  354 (355)
                      +++|++++
T Consensus       318 ~e~l~~~~  325 (335)
T 1rpn_A          318 DELIRMMV  325 (335)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHH
Confidence            99999886

>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}

Probab=100.00  E-value=1.7e-38  Score=282.20  Aligned_cols=287  Identities=13%  Similarity=0.121  Sum_probs=213.3

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhC--CCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcC--CCcEEEECCC
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQAD--NHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ--GSTAVVNLAG  125 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--~~d~vi~~a~  125 (355)
                      +|+|||||||||||++|+++|+++  |++|++++|+....... ...   ....+|+.|.+++.++++  ++|+|||+|+
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~-~~~---~~~~~D~~d~~~~~~~~~~~~~d~vih~a~   77 (312)
T 2yy7_A            2 NPKILIIGACGQIGTELTQKLRKLYGTENVIASDIRKLNTDVV-NSG---PFEVVNALDFNQIEHLVEVHKITDIYLMAA   77 (312)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHHHHCGGGEEEEESCCCSCHHH-HSS---CEEECCTTCHHHHHHHHHHTTCCEEEECCC
T ss_pred             CceEEEECCccHHHHHHHHHHHHhCCCCEEEEEcCCCcccccc-CCC---ceEEecCCCHHHHHHHHhhcCCCEEEECCc
Confidence            478999999999999999999998  89999999987553211 111   144578889999999887  8999999998


Q ss_pred             CCCCCCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCCC-CccccCCCCC--CChh-HHHHHHH
Q 018503          126 TPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSE-TEVFDESSPS--GNDY-LAEVCRE  201 (355)
Q Consensus       126 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~-~~~~~e~~~~--~~~y-~~k~~~~  201 (355)
                      ....  ....++...+++|+.++.++++++.+  .++++|||+||.++  |+... ..+.+|+.+.  ...| .+|...|
T Consensus        78 ~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~--~~~~~~v~~SS~~~--~~~~~~~~~~~e~~~~~~~~~Y~~sK~~~e  151 (312)
T 2yy7_A           78 LLSA--TAEKNPAFAWDLNMNSLFHVLNLAKA--KKIKKIFWPSSIAV--FGPTTPKENTPQYTIMEPSTVYGISKQAGE  151 (312)
T ss_dssp             CCHH--HHHHCHHHHHHHHHHHHHHHHHHHHT--TSCSEEECCEEGGG--CCTTSCSSSBCSSCBCCCCSHHHHHHHHHH
T ss_pred             cCCC--chhhChHHHHHHHHHHHHHHHHHHHH--cCCCEEEEeccHHH--hCCCCCCCCccccCcCCCCchhHHHHHHHH
Confidence            6421  12355678899999999999999998  78899999999998  88643 3456666553  4567 7888888


Q ss_pred             HHHHHhccCCCCeEEEEEecEEEeCCCCcc----cchHHHH-HHHhCCC---CCCCCcceecccHHHHHHHHHHHHhCCC
Q 018503          202 WEGTALKVNKDVRLALIRIGIVLGKDGGAL----AKMIPLF-MMFAGGP---LGSGQQWFSWIHLDDIVNLIYEALSNPS  273 (355)
Q Consensus       202 ~~~~~~~~~~~~~~~i~Rp~~i~G~~~~~~----~~~~~~~-~~~~~~~---~~~~~~~~~~i~v~Dva~~~~~~~~~~~  273 (355)
                      .....+..+.+++++++||+++||+...+.    ..+...+ ....+++   ++.+++.++++|++|+|++++.+++++.
T Consensus       152 ~~~~~~~~~~~~~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~  231 (312)
T 2yy7_A          152 RWCEYYHNIYGVDVRSIRYPGLISWSTPPGGGTTDYAVDIFYKAIADKKYECFLSSETKMPMMYMDDAIDATINIMKAPV  231 (312)
T ss_dssp             HHHHHHHHHHCCEEECEEECEEECSSSCCCSCTTTHHHHHHHHHHHTSEEEESSCTTCCEEEEEHHHHHHHHHHHHHSCG
T ss_pred             HHHHHHHHhcCCcEEEEeCCeEecCCCCCCCchhhhHHHHHHHHHcCCCeEEecCCCceeeeeeHHHHHHHHHHHHhCcc
Confidence            777766666699999999999999753211    1133332 3333333   3677889999999999999999998765


Q ss_pred             C----CCceEecCCCccCHHHHHHHHHHHhCCCCCCCCcHHHHHHHhcccceeeecCccccchhHHh-CCCCCCccCHHH
Q 018503          274 Y----RGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKE-LGFPFKYRYVKD  348 (355)
Q Consensus       274 ~----~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~-lG~~p~~~~~~~  348 (355)
                      .    +++||+++ +++|+.|+++.+.+.+|.. .++......... ..     .....++++|+++ |||+|+++ +++
T Consensus       232 ~~~~~~~~~ni~~-~~~s~~e~~~~i~~~~~~~-~i~~~~~~~~~~-~~-----~~~~~~d~~k~~~~lG~~p~~~-l~~  302 (312)
T 2yy7_A          232 EKIKIHSSYNLAA-MSFTPTEIANEIKKHIPEF-TITYEPDFRQKI-AD-----SWPASIDDSQAREDWDWKHTFD-LES  302 (312)
T ss_dssp             GGCCCSSCEECCS-EEECHHHHHHHHHTTCTTC-EEEECCCTHHHH-HT-----TSCSSBCCHHHHHHHCCCCCCC-HHH
T ss_pred             cccccCceEEeCC-CccCHHHHHHHHHHHCCCC-ceEeccCccccc-cc-----cccccCCHHHHHHHcCCCCCCC-HHH
Confidence            2    37999986 7899999999999999842 121111100110 00     1234678888965 99999996 999


Q ss_pred             HHHHHhC
Q 018503          349 ALKAIMS  355 (355)
Q Consensus       349 ~l~~~~~  355 (355)
                      +|+++++
T Consensus       303 ~l~~~~~  309 (312)
T 2yy7_A          303 MTKDMIE  309 (312)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            9999863

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}

Probab=100.00  E-value=5.8e-38  Score=275.30  Aligned_cols=272  Identities=23%  Similarity=0.229  Sum_probs=200.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcCCCcEEEECCCCCC
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTPI  128 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~~~  128 (355)
                      |+|+|||||| ||||++|+++|+++||+|++++|++.+...+.....  ....+|+.|.+     ++++|+|||+|+...
T Consensus         4 m~~~ilVtGa-G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~--~~~~~D~~d~~-----~~~~d~vi~~a~~~~   75 (286)
T 3ius_A            4 MTGTLLSFGH-GYTARVLSRALAPQGWRIIGTSRNPDQMEAIRASGA--EPLLWPGEEPS-----LDGVTHLLISTAPDS   75 (286)
T ss_dssp             -CCEEEEETC-CHHHHHHHHHHGGGTCEEEEEESCGGGHHHHHHTTE--EEEESSSSCCC-----CTTCCEEEECCCCBT
T ss_pred             CcCcEEEECC-cHHHHHHHHHHHHCCCEEEEEEcChhhhhhHhhCCC--eEEEecccccc-----cCCCCEEEECCCccc
Confidence            4589999998 999999999999999999999999876543321110  02334555533     789999999998642


Q ss_pred             CCCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCC--hh-HHHHHHHHHHH
Q 018503          129 GTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGN--DY-LAEVCREWEGT  205 (355)
Q Consensus       129 ~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~--~y-~~k~~~~~~~~  205 (355)
                      ..              ...+.++++++++...++++|||+||.++  ||...+.+++|+++..+  .| .+|...|....
T Consensus        76 ~~--------------~~~~~~l~~a~~~~~~~~~~~v~~Ss~~v--yg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~  139 (286)
T 3ius_A           76 GG--------------DPVLAALGDQIAARAAQFRWVGYLSTTAV--YGDHDGAWVDETTPLTPTAARGRWRVMAEQQWQ  139 (286)
T ss_dssp             TB--------------CHHHHHHHHHHHHTGGGCSEEEEEEEGGG--GCCCTTCEECTTSCCCCCSHHHHHHHHHHHHHH
T ss_pred             cc--------------cHHHHHHHHHHHhhcCCceEEEEeeccee--cCCCCCCCcCCCCCCCCCCHHHHHHHHHHHHHH
Confidence            11              11245788888773237789999999998  99887778899887544  46 66666666555


Q ss_pred             HhccCCCCeEEEEEecEEEeCCCCcccchHHHHHHHhCCCC--CCCCcceecccHHHHHHHHHHHHhCCCCCCceEecCC
Q 018503          206 ALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPL--GSGQQWFSWIHLDDIVNLIYEALSNPSYRGVINGTAP  283 (355)
Q Consensus       206 ~~~~~~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~i~v~Dva~~~~~~~~~~~~~~~~~i~~~  283 (355)
                      .+   .+++++++||+++||++......+      ..+...  ..+++.++++|++|+|++++.+++++..+++||++++
T Consensus       140 ~~---~~~~~~ilRp~~v~G~~~~~~~~~------~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~~g~~~~i~~~  210 (286)
T 3ius_A          140 AV---PNLPLHVFRLAGIYGPGRGPFSKL------GKGGIRRIIKPGQVFSRIHVEDIAQVLAASMARPDPGAVYNVCDD  210 (286)
T ss_dssp             HS---TTCCEEEEEECEEEBTTBSSSTTS------SSSCCCEEECTTCCBCEEEHHHHHHHHHHHHHSCCTTCEEEECCS
T ss_pred             hh---cCCCEEEEeccceECCCchHHHHH------hcCCccccCCCCcccceEEHHHHHHHHHHHHhCCCCCCEEEEeCC
Confidence            44   589999999999999986543222      234332  3446789999999999999999999876779999999


Q ss_pred             CccCHHHHHHHHHHHhCCCCCCCCcHHHHHHHhccc-ceeeecCccccchhHHh-CCCCCCccCHHHHHHHHhC
Q 018503          284 NPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEG-AFVVLEGQRVVPARAKE-LGFPFKYRYVKDALKAIMS  355 (355)
Q Consensus       284 ~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~k~~~-lG~~p~~~~~~~~l~~~~~  355 (355)
                      +++|+.|+++.+++.+|.+....++.....  .++. ..+...+..++++|+++ |||+|++++++++|+++++
T Consensus       211 ~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~--~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~p~~~e~l~~~~~  282 (286)
T 3ius_A          211 EPVPPQDVIAYAAELQGLPLPPAVDFDKAD--LTPMARSFYSENKRVRNDRIKEELGVRLKYPNYRVGLEALQA  282 (286)
T ss_dssp             CCBCHHHHHHHHHHHHTCCCCCEEEGGGSC--CCHHHHHTTSCCCEECCHHHHHTTCCCCSCSSHHHHHHHHHH
T ss_pred             CCccHHHHHHHHHHHcCCCCCcccchhhhc--cChhHHHhhcCCceeehHHHHHHhCCCCCcCCHHHHHHHHHH
Confidence            999999999999999998743333322110  0110 01123566788899976 8999999559999999873

>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*

Probab=100.00  E-value=3e-38  Score=284.90  Aligned_cols=289  Identities=19%  Similarity=0.210  Sum_probs=213.8

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCch------hh----ccCC-CCCCccCCCeeecCCcchhhhcC--C
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSK------AE----LIFP-GKKTRFFPGVMIAEEPQWRDCIQ--G  116 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~------~~----~~~~-~~~~~~~~~~d~~~~~~~~~~~~--~  116 (355)
                      +|+|||||||||||++|+++|++.|++|++++|+...      ..    .+.. .........+|+.|.+++.++++  +
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   81 (348)
T 1ek6_A            2 AEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKKYS   81 (348)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHCC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCcccccccccHHHHHHHHhccCCceEEEECCCCCHHHHHHHHHhcC
Confidence            5799999999999999999999999999999986543      10    0000 00000134578889999998887  8


Q ss_pred             CcEEEECCCCCCCCCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCCCCccccCCCCC---CCh
Q 018503          117 STAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPS---GND  193 (355)
Q Consensus       117 ~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~---~~~  193 (355)
                      +|+|||+|+.... .....++...+++|+.++.++++++++  .++++|||+||.++  ||.....+++|+++.   ...
T Consensus        82 ~d~vih~A~~~~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~--~~~~~iv~~SS~~~--~g~~~~~~~~E~~~~~p~~~~  156 (348)
T 1ek6_A           82 FMAVIHFAGLKAV-GESVQKPLDYYRVNLTGTIQLLEIMKA--HGVKNLVFSSSATV--YGNPQYLPLDEAHPTGGCTNP  156 (348)
T ss_dssp             EEEEEECCSCCCH-HHHHHCHHHHHHHHHHHHHHHHHHHHH--TTCCEEEEEEEGGG--GCSCSSSSBCTTSCCCCCSSH
T ss_pred             CCEEEECCCCcCc-cchhhchHHHHHHHHHHHHHHHHHHHH--hCCCEEEEECcHHH--hCCCCCCCcCCCCCCCCCCCc
Confidence            9999999996421 112345678899999999999999998  68899999999988  987777788888764   346


Q ss_pred             h-HHHHHHHHHHHHhccC-CCCeEEEEEecEEEeCCC------Cc---ccchHHHH-HHHh--CCCC---C------CCC
Q 018503          194 Y-LAEVCREWEGTALKVN-KDVRLALIRIGIVLGKDG------GA---LAKMIPLF-MMFA--GGPL---G------SGQ  250 (355)
Q Consensus       194 y-~~k~~~~~~~~~~~~~-~~~~~~i~Rp~~i~G~~~------~~---~~~~~~~~-~~~~--~~~~---~------~~~  250 (355)
                      | .+|...|.....+..+ .+++++++||+++||+..      ..   ...+++.+ ....  +.++   +      +++
T Consensus       157 Y~~sK~~~e~~~~~~~~~~~~~~~~~lR~~~v~G~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~  236 (348)
T 1ek6_A          157 YGKSKFFIEEMIRDLCQADKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDGT  236 (348)
T ss_dssp             HHHHHHHHHHHHHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHHTSSSCEEEECSCSSSSSSS
T ss_pred             hHHHHHHHHHHHHHHHhcCCCcceEEEeeccccCCCcccccCcCcccchhhHHHHHHHHHHhcCCCeEEeCCcccCCCCc
Confidence            7 7787777777666544 249999999999999852      10   12344433 2222  3322   2      567


Q ss_pred             cceecccHHHHHHHHHHHHhCC--CCC-CceEecCCCccCHHHHHHHHHHHhCCCCCC-CCcHHHHHHHhcccceeeecC
Q 018503          251 QWFSWIHLDDIVNLIYEALSNP--SYR-GVINGTAPNPVRLAEMCDHLGNVLGRPSWL-PVPEFALKAVLGEGAFVVLEG  326 (355)
Q Consensus       251 ~~~~~i~v~Dva~~~~~~~~~~--~~~-~~~~i~~~~~~s~~el~~~i~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~  326 (355)
                      +.++|+|++|+|++++.+++.+  ..+ ++||+++++++|+.|+++.+.+.+|.+..+ ..|..     .++.     ..
T Consensus       237 ~~~~~i~v~Dva~a~~~~~~~~~~~~g~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~-----~~~~-----~~  306 (348)
T 1ek6_A          237 GVRDYIHVVDLAKGHIAALRKLKEQCGCRIYNLGTGTGYSVLQMVQAMEKASGKKIPYKVVARR-----EGDV-----AA  306 (348)
T ss_dssp             CEECEEEHHHHHHHHHHHHHHHTTTCCEEEEEECCSCCEEHHHHHHHHHHHHCSCCCEEEECCC-----TTCC-----SE
T ss_pred             eEEeeEEHHHHHHHHHHHHhcccccCCceEEEeCCCCCccHHHHHHHHHHHhCCCCceeeCCCC-----Cccc-----hh
Confidence            8899999999999999999764  233 699999999999999999999999976322 11110     1111     23


Q ss_pred             ccccchhHH-hCCCCCCccCHHHHHHHHh
Q 018503          327 QRVVPARAK-ELGFPFKYRYVKDALKAIM  354 (355)
Q Consensus       327 ~~~~~~k~~-~lG~~p~~~~~~~~l~~~~  354 (355)
                      ..++++|++ .|||+|+++ ++++|++++
T Consensus       307 ~~~d~~k~~~~lG~~p~~~-l~~~l~~~~  334 (348)
T 1ek6_A          307 CYANPSLAQEELGWTAALG-LDRMCEDLW  334 (348)
T ss_dssp             ECBCCHHHHHTTCCCCCCC-HHHHHHHHH
T ss_pred             hccCHHHHHHhcCCCCCCC-HHHHHHHHH
Confidence            456778885 599999997 999999886

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}

Probab=100.00  E-value=1.5e-37  Score=278.55  Aligned_cols=281  Identities=16%  Similarity=0.136  Sum_probs=208.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcCC--CcEEEECCCC
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQG--STAVVNLAGT  126 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~--~d~vi~~a~~  126 (355)
                      .+|+|||||||||||++|+++|++.|++|++++|+..................+|+.|.+++.+++++  +|+|||+|+.
T Consensus        20 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~l~~~~~~~~~~~Dl~d~~~~~~~~~~~~~D~vih~A~~   99 (333)
T 2q1w_A           20 HMKKVFITGICGQIGSHIAELLLERGDKVVGIDNFATGRREHLKDHPNLTFVEGSIADHALVNQLIGDLQPDAVVHTAAS   99 (333)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGSCCCTTEEEEECCTTCHHHHHHHHHHHCCSEEEECCCC
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCCccchhhHhhcCCceEEEEeCCCHHHHHHHHhccCCcEEEECcee
Confidence            45799999999999999999999999999999998654322111100011345688899999999887  9999999997


Q ss_pred             CCCCCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeC----CCCCccccCCCCCC-Chh-HHHHHH
Q 018503          127 PIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYG----TSETEVFDESSPSG-NDY-LAEVCR  200 (355)
Q Consensus       127 ~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg----~~~~~~~~e~~~~~-~~y-~~k~~~  200 (355)
                      ....  ...++.  +++|+.++.++++++.+  .++++|||+||.++  ||    .... +++|++.+. ..| .+|...
T Consensus       100 ~~~~--~~~~~~--~~~N~~~~~~l~~a~~~--~~~~~iV~~SS~~~--~g~~~~~~~~-~~~E~~~p~~~~Y~~sK~~~  170 (333)
T 2q1w_A          100 YKDP--DDWYND--TLTNCVGGSNVVQAAKK--NNVGRFVYFQTALC--YGVKPIQQPV-RLDHPRNPANSSYAISKSAN  170 (333)
T ss_dssp             CSCT--TCHHHH--HHHHTHHHHHHHHHHHH--TTCSEEEEEEEGGG--GCSCCCSSSB-CTTSCCCCTTCHHHHHHHHH
T ss_pred             cCCC--ccCChH--HHHHHHHHHHHHHHHHH--hCCCEEEEECcHHH--hCCCcccCCC-CcCCCCCCCCCchHHHHHHH
Confidence            5321  223333  89999999999999998  68899999999988  88    5444 777776444 677 777766


Q ss_pred             HHHHHH-hccCCCCeEEEEEecEEEeCCCCcccchHHHH--HHHhCCCC-CCCCcceecccHHHHHHHHHHHHhCCCCCC
Q 018503          201 EWEGTA-LKVNKDVRLALIRIGIVLGKDGGALAKMIPLF--MMFAGGPL-GSGQQWFSWIHLDDIVNLIYEALSNPSYRG  276 (355)
Q Consensus       201 ~~~~~~-~~~~~~~~~~i~Rp~~i~G~~~~~~~~~~~~~--~~~~~~~~-~~~~~~~~~i~v~Dva~~~~~~~~~~~~~~  276 (355)
                      |..... +.     +++++||+++||++..  ..+++.+  ....+..+ + ++..+++++++|+|++++.++..+. ++
T Consensus       171 E~~~~~s~~-----~~~ilR~~~v~gp~~~--~~~~~~~~~~~~~~~~~~~-~~~~~~~i~v~Dva~ai~~~~~~~~-g~  241 (333)
T 2q1w_A          171 EDYLEYSGL-----DFVTFRLANVVGPRNV--SGPLPIFFQRLSEGKKCFV-TKARRDFVFVKDLARATVRAVDGVG-HG  241 (333)
T ss_dssp             HHHHHHHTC-----CEEEEEESEEESTTCC--SSHHHHHHHHHHTTCCCEE-EECEECEEEHHHHHHHHHHHHTTCC-CE
T ss_pred             HHHHHhhhC-----CeEEEeeceEECcCCc--CcHHHHHHHHHHcCCeeeC-CCceEeeEEHHHHHHHHHHHHhcCC-CC
Confidence            666654 33     8999999999999832  1233322  22333332 4 6778899999999999999999876 77


Q ss_pred             ceEecCCCccCHHHHHHHHHHHhCCCCCCCCcHHHHHHHhcccceeeecCccccchhHHhCCCCCCccCHHHHHHHHh
Q 018503          277 VINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPFKYRYVKDALKAIM  354 (355)
Q Consensus       277 ~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~lG~~p~~~~~~~~l~~~~  354 (355)
                      +||+++++++|+.|+++.+.+.+|.+.....|...      +..........++++|++++||+|+++ ++++|++++
T Consensus       242 ~~~v~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~------~~~~~~~~~~~~d~~k~~~~G~~p~~~-~~~~l~~~~  312 (333)
T 2q1w_A          242 AYHFSSGTDVAIKELYDAVVEAMALPSYPEPEIRE------LGPDDAPSILLDPSRTIQDFGKIEFTP-LKETVAAAV  312 (333)
T ss_dssp             EEECSCSCCEEHHHHHHHHHHHTTCSSCCCCEEEE------CCTTSCCCCCBCCHHHHHHHCCCCCCC-HHHHHHHHH
T ss_pred             EEEeCCCCCccHHHHHHHHHHHhCCCCceeCCCCC------cccccccccccCCHHHHHhcCCCcCCC-HHHHHHHHH
Confidence            99999999999999999999999976111222211      111112356678889997779999996 999999886

>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A

Probab=100.00  E-value=4.9e-38  Score=283.11  Aligned_cols=295  Identities=17%  Similarity=0.232  Sum_probs=215.5

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhC-CCeEEEEecCCchhhccCCCCCCccCCCeeecCC-cchhhhcCCCcEEEECCCCCC
Q 018503           51 MTVSVTGATGFIGRRLVQRLQAD-NHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEE-PQWRDCIQGSTAVVNLAGTPI  128 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~-~~~~~~~~~~d~vi~~a~~~~  128 (355)
                      |+|||||||||||++|+++|+++ |++|++++|+......+..... .....+|+.|. +.+.++++++|+|||+|+...
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~D~~~~~~~~~~~~~~~d~vih~A~~~~   79 (345)
T 2bll_A            1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPH-FHFVEGDISIHSEWIEYHVKKCDVVLPLVAIAT   79 (345)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGTTCTT-EEEEECCTTTCSHHHHHHHHHCSEEEECBCCCC
T ss_pred             CeEEEECCCcHHHHHHHHHHHHhCCCEEEEEeCCcchHHHhhcCCC-eEEEeccccCcHHHHHhhccCCCEEEEcccccC
Confidence            68999999999999999999998 8999999998876543322111 01334678774 467788889999999998642


Q ss_pred             CCCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCCCCccccCCCCC---------CChh-HHHH
Q 018503          129 GTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPS---------GNDY-LAEV  198 (355)
Q Consensus       129 ~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~---------~~~y-~~k~  198 (355)
                      .. ....++...+++|+.++.++++++.+  .+ ++|||+||.++  ||.....+++|+++.         ...| .+|.
T Consensus        80 ~~-~~~~~~~~~~~~n~~~~~~l~~~~~~--~~-~~~v~~SS~~v--~g~~~~~~~~e~~~~~~~~~~~~~~~~Y~~sK~  153 (345)
T 2bll_A           80 PI-EYTRNPLRVFELDFEENLRIIRYCVK--YR-KRIIFPSTSEV--YGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQ  153 (345)
T ss_dssp             HH-HHHHSHHHHHHHHTHHHHHHHHHHHH--TT-CEEEEECCGGG--GBTCCCSSBCTTTCCCBCCCTTCGGGHHHHHHH
T ss_pred             cc-chhcCHHHHHHHHHHHHHHHHHHHHH--hC-CeEEEEecHHH--cCCCCCCCcCCcccccccCcccCcccccHHHHH
Confidence            11 11245667889999999999999998  56 89999999998  987666677777642         1257 7788


Q ss_pred             HHHHHHHHhccCCCCeEEEEEecEEEeCCCCcc-------cchHHHH--HHHhCCCC---CCCCcceecccHHHHHHHHH
Q 018503          199 CREWEGTALKVNKDVRLALIRIGIVLGKDGGAL-------AKMIPLF--MMFAGGPL---GSGQQWFSWIHLDDIVNLIY  266 (355)
Q Consensus       199 ~~~~~~~~~~~~~~~~~~i~Rp~~i~G~~~~~~-------~~~~~~~--~~~~~~~~---~~~~~~~~~i~v~Dva~~~~  266 (355)
                      ..|.....+..+.+++++++||+.+||++....       ..++..+  ....+.++   +++++.++++|++|+|++++
T Consensus       154 ~~e~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~  233 (345)
T 2bll_A          154 LLDRVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEALY  233 (345)
T ss_dssp             HHHHHHHHHHHHHCCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEEGGGSCCEEECEEHHHHHHHHH
T ss_pred             HHHHHHHHHHHhcCCCEEEEcCCcccCCCcccccccccccccHHHHHHHHHHcCCCcEEECCCCEEEEEEEHHHHHHHHH
Confidence            787777766655699999999999999975321       1222222  34455553   56788899999999999999


Q ss_pred             HHHhCCC---CCCceEecCCC-ccCHHHHHHHHHHHhCCCC-CCCCcHHHH------HHHhcccceeeecCccccchhHH
Q 018503          267 EALSNPS---YRGVINGTAPN-PVRLAEMCDHLGNVLGRPS-WLPVPEFAL------KAVLGEGAFVVLEGQRVVPARAK  335 (355)
Q Consensus       267 ~~~~~~~---~~~~~~i~~~~-~~s~~el~~~i~~~~g~~~-~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~k~~  335 (355)
                      .+++++.   .+++||+++++ ++|+.|+++.+++.+|.+. .+..|.+..      ....+.. ........++++|++
T Consensus       234 ~~~~~~~~~~~g~~~~i~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~d~~k~~  312 (345)
T 2bll_A          234 RIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLRHHFPPFAGFRVVESSSYYGKG-YQDVEHRKPSIRNAH  312 (345)
T ss_dssp             HHHHCGGGTTTTEEEEECCTTSEEEHHHHHHHHHHHHHTCTTGGGSCCCCCEEEC-------------CCCCCBCCHHHH
T ss_pred             HHHhhccccCCCceEEeCCCCCCCCHHHHHHHHHHHhCCCcccccCccccccccccchhhcccc-ccchhhhcccHHHHH
Confidence            9998763   35699999986 8999999999999998763 233332210      0000100 001234567888886


Q ss_pred             -hCCCCCCccCHHHHHHHHh
Q 018503          336 -ELGFPFKYRYVKDALKAIM  354 (355)
Q Consensus       336 -~lG~~p~~~~~~~~l~~~~  354 (355)
                       +|||+|+++ ++++|++++
T Consensus       313 ~~lG~~p~~~-l~~~l~~~~  331 (345)
T 2bll_A          313 RCLDWEPKID-MQETIDETL  331 (345)
T ss_dssp             HHHCCCCCCC-HHHHHHHHH
T ss_pred             HhcCCCcccc-HHHHHHHHH
Confidence             599999996 999999986

>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*

Probab=100.00  E-value=2e-37  Score=278.87  Aligned_cols=286  Identities=19%  Similarity=0.213  Sum_probs=209.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcCCCcEEEECCCCCC
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTPI  128 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~~~  128 (355)
                      ++|+|||||||||||++|+++|++.|++|++++|+............  ....+++...|..+..+.++|+|||+|+...
T Consensus        26 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~d~vih~A~~~~  103 (343)
T 2b69_A           26 DRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWI--GHENFELINHDVVEPLYIEVDQIYHLASPAS  103 (343)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTGGGT--TCTTEEEEECCTTSCCCCCCSEEEECCSCCS
T ss_pred             CCCEEEEEcCccHHHHHHHHHHHHCCCEEEEEeCCCccchhhhhhhc--cCCceEEEeCccCChhhcCCCEEEECccccC
Confidence            45799999999999999999999999999999997543221111000  0123555555544556778999999999642


Q ss_pred             CCCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCCCCccccCCC-----CC--CChh-HHHHHH
Q 018503          129 GTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESS-----PS--GNDY-LAEVCR  200 (355)
Q Consensus       129 ~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~-----~~--~~~y-~~k~~~  200 (355)
                      ... ...++...+++|+.++.++++++.+  .++ ++||+||.++  ||.....+++|+.     +.  ...| .+|...
T Consensus       104 ~~~-~~~~~~~~~~~n~~~~~~l~~a~~~--~~~-~~v~~SS~~v--~g~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~  177 (343)
T 2b69_A          104 PPN-YMYNPIKTLKTNTIGTLNMLGLAKR--VGA-RLLLASTSEV--YGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVA  177 (343)
T ss_dssp             HHH-HTTCHHHHHHHHHHHHHHHHHHHHH--HTC-EEEEEEEGGG--GBSCSSSSBCTTCCCBCCSSSTTHHHHHHHHHH
T ss_pred             chh-hhhCHHHHHHHHHHHHHHHHHHHHH--hCC-cEEEECcHHH--hCCCCCCCCcccccccCCCCCCCCchHHHHHHH
Confidence            211 1234567889999999999999988  565 8999999988  9876666777763     32  2346 778777


Q ss_pred             HHHHHHhccCCCCeEEEEEecEEEeCCCCcc-cchHHHH--HHHhCCCC---CCCCcceecccHHHHHHHHHHHHhCCCC
Q 018503          201 EWEGTALKVNKDVRLALIRIGIVLGKDGGAL-AKMIPLF--MMFAGGPL---GSGQQWFSWIHLDDIVNLIYEALSNPSY  274 (355)
Q Consensus       201 ~~~~~~~~~~~~~~~~i~Rp~~i~G~~~~~~-~~~~~~~--~~~~~~~~---~~~~~~~~~i~v~Dva~~~~~~~~~~~~  274 (355)
                      |.....+..+.+++++++||+++||+..... ..++..+  ....+.++   ++++..++++|++|+|++++.++..+. 
T Consensus       178 E~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~-  256 (343)
T 2b69_A          178 ETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSNV-  256 (343)
T ss_dssp             HHHHHHHHHHHCCCEEEEEECCEECTTCCTTCCCHHHHHHHHHHHTCCEEEESSSCCEEECEEHHHHHHHHHHHHTSSC-
T ss_pred             HHHHHHHHHHhCCcEEEEEEcceeCcCCCCCcccHHHHHHHHHHcCCCceEcCCCCeEEeeEeHHHHHHHHHHHHhcCC-
Confidence            7777666555699999999999999975321 1233222  33455553   677889999999999999999998753 


Q ss_pred             CCceEecCCCccCHHHHHHHHHHHhCCCCCC-CCcHHHHHHHhcccceeeecCccccchhHH-hCCCCCCccCHHHHHHH
Q 018503          275 RGVINGTAPNPVRLAEMCDHLGNVLGRPSWL-PVPEFALKAVLGEGAFVVLEGQRVVPARAK-ELGFPFKYRYVKDALKA  352 (355)
Q Consensus       275 ~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~-~lG~~p~~~~~~~~l~~  352 (355)
                      +++||+++++++|+.|+++.+.+.+|.+..+ ..|...     .+     .....++++|++ .|||+|+++ ++++|++
T Consensus       257 ~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~p~~~-----~~-----~~~~~~d~~k~~~~lG~~p~~~-l~e~l~~  325 (343)
T 2b69_A          257 SSPVNLGNPEEHTILEFAQLIKNLVGSGSEIQFLSEAQ-----DD-----PQKRKPDIKKAKLMLGWEPVVP-LEEGLNK  325 (343)
T ss_dssp             CSCEEESCCCEEEHHHHHHHHHHHHTCCCCEEEECCCT-----TC-----CCCCCBCCHHHHHHHCCCCCSC-HHHHHHH
T ss_pred             CCeEEecCCCCCcHHHHHHHHHHHhCCCCCceeCCCCC-----CC-----CceecCCHHHHHHHcCCCCCCC-HHHHHHH
Confidence            6799999999999999999999999987322 222211     01     124456778886 599999986 9999998


Q ss_pred             Hh
Q 018503          353 IM  354 (355)
Q Consensus       353 ~~  354 (355)
                      ++
T Consensus       326 ~~  327 (343)
T 2b69_A          326 AI  327 (343)
T ss_dssp             HH
T ss_pred             HH
Confidence            86

>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*

Probab=100.00  E-value=4.4e-37  Score=282.14  Aligned_cols=290  Identities=16%  Similarity=0.175  Sum_probs=214.2

Q ss_pred             CCEEEEEcCCchHHHHHHHHHH-hCCCeEEEEecCCchh---------hccC-------CC--CCC---ccCCCeeecCC
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQ-ADNHQVRVLTRSRSKA---------ELIF-------PG--KKT---RFFPGVMIAEE  107 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~-~~g~~V~~~~r~~~~~---------~~~~-------~~--~~~---~~~~~~d~~~~  107 (355)
                      .|+||||||+||||++|+++|+ +.|++|++++|+....         ..+.       ..  ...   .....+|+.|+
T Consensus         2 ~m~vlVTGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~   81 (397)
T 1gy8_A            2 HMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNE   81 (397)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHhCCCEEEEEecCCcccccccccchHHHHHHHHHHhhccccccCCceEEEEECCCCCH
Confidence            4799999999999999999999 9999999999976542         1110       00  000   01345688899


Q ss_pred             cchhhhcC--C-CcEEEECCCCCCCCCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCCC----
Q 018503          108 PQWRDCIQ--G-STAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSE----  180 (355)
Q Consensus       108 ~~~~~~~~--~-~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~----  180 (355)
                      +.+.++++  + +|+|||+|+.... .....++...+++|+.++.++++++.+  .++++|||+||.++  ||...    
T Consensus        82 ~~~~~~~~~~~~~d~vih~A~~~~~-~~~~~~~~~~~~~Nv~g~~~ll~a~~~--~~~~~iv~~SS~~v--~g~~~~~~~  156 (397)
T 1gy8_A           82 DFLNGVFTRHGPIDAVVHMCAFLAV-GESVRDPLKYYDNNVVGILRLLQAMLL--HKCDKIIFSSSAAI--FGNPTMGSV  156 (397)
T ss_dssp             HHHHHHHHHSCCCCEEEECCCCCCH-HHHHHCHHHHHHHHHHHHHHHHHHHHH--TTCCEEEEEEEGGG--TBSCCC---
T ss_pred             HHHHHHHHhcCCCCEEEECCCccCc-CcchhhHHHHHHHHhHHHHHHHHHHHH--hCCCEEEEECCHHH--hCCCCcccc
Confidence            89988887  6 9999999996421 112345678899999999999999998  68899999999988  88655    


Q ss_pred             ---CccccCCCCC--CChh-HHHHHHHHHHHHhccCCCCeEEEEEecEEEeCCCC--------cccchHHHH------HH
Q 018503          181 ---TEVFDESSPS--GNDY-LAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGG--------ALAKMIPLF------MM  240 (355)
Q Consensus       181 ---~~~~~e~~~~--~~~y-~~k~~~~~~~~~~~~~~~~~~~i~Rp~~i~G~~~~--------~~~~~~~~~------~~  240 (355)
                         ..+++|+++.  ...| .+|...|.+...+..+.+++++++||+++||+...        ....+++.+      ..
T Consensus       157 ~~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~gi~~~ilRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~  236 (397)
T 1gy8_A          157 STNAEPIDINAKKSPESPYGESKLIAERMIRDCAEAYGIKGICLRYFNACGAHEDGDIGEHYQGSTHLIPIILGRVMSDI  236 (397)
T ss_dssp             --CCCCBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECCCTTSSCSCCSTTCCSHHHHHHHHHHHHH
T ss_pred             cccccCcCccCCCCCCCchHHHHHHHHHHHHHHHHHHCCcEEEEeccceeCCCccccccccccchhHHHHHHHHHHHHHH
Confidence               5678888764  3567 78888887777766656999999999999999631        112334332      22


Q ss_pred             HhCC------------CC---C------CCCcceecccHHHHHHHHHHHHhCCC-C-----C---CceEecCCCccCHHH
Q 018503          241 FAGG------------PL---G------SGQQWFSWIHLDDIVNLIYEALSNPS-Y-----R---GVINGTAPNPVRLAE  290 (355)
Q Consensus       241 ~~~~------------~~---~------~~~~~~~~i~v~Dva~~~~~~~~~~~-~-----~---~~~~i~~~~~~s~~e  290 (355)
                      ..+.            ++   +      ++++.++|||++|+|++++.+++.+. .     .   ++||+++++++|+.|
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~v~v~Dva~a~~~~l~~~~~~~~~~~~~~~~~~ni~~~~~~s~~e  316 (397)
T 1gy8_A          237 APDQRLTIHEDASTDKRMPIFGTDYPTPDGTCVRDYVHVCDLASAHILALDYVEKLGPNDKSKYFSVFNLGTSRGYSVRE  316 (397)
T ss_dssp             SCC-----------CCCEEEECSCSSSTTSSCEECEEEHHHHHHHHHHHHHHHHTCCTTTGGGSEEEEEESCSCCEEHHH
T ss_pred             HhcCccccccccccCCCceeecCcccCCCCCeeEeeEeHHHHHHHHHHHHhcccccccccccCCCcEEEeCCCCcccHHH
Confidence            2232            21   2      57788999999999999999997532 2     2   799999999999999


Q ss_pred             HHHHHHHHhCCCCCC-CCcHHHHHHHhcccceeeecCccccchhHH-hCCCCCCccCHHHHHHHHh
Q 018503          291 MCDHLGNVLGRPSWL-PVPEFALKAVLGEGAFVVLEGQRVVPARAK-ELGFPFKYRYVKDALKAIM  354 (355)
Q Consensus       291 l~~~i~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~-~lG~~p~~~~~~~~l~~~~  354 (355)
                      +++.+.+.+|.+..+ ..|..     .++.     ....++++|++ .|||+|++++++++|++++
T Consensus       317 ~~~~i~~~~g~~~~~~~~~~~-----~~~~-----~~~~~d~~k~~~~lG~~p~~~~l~e~l~~~~  372 (397)
T 1gy8_A          317 VIEVARKTTGHPIPVRECGRR-----EGDP-----AYLVAASDKAREVLGWKPKYDTLEAIMETSW  372 (397)
T ss_dssp             HHHHHHHHHCCCCCEEEECCC-----TTCC-----SEECBCCHHHHHHTCCCCSCCSHHHHHHHHH
T ss_pred             HHHHHHHHhCCCCCeeeCCCC-----CCcc-----cccccCHHHHHHHhCCCCCcCCHHHHHHHHH
Confidence            999999999976322 11110     1111     23456778885 5999999944999999986

>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*

Probab=100.00  E-value=3.2e-37  Score=283.71  Aligned_cols=287  Identities=19%  Similarity=0.185  Sum_probs=208.6

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhc-----------------c-------CCCCCCccCCCeeec
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAEL-----------------I-------FPGKKTRFFPGVMIA  105 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-----------------~-------~~~~~~~~~~~~d~~  105 (355)
                      +|+|||||||||||++|+++|+++|++|++++|.......                 .       ....   ....+|+.
T Consensus        11 ~~~vlVTG~tGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v---~~~~~Dl~   87 (404)
T 1i24_A           11 GSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSI---ELYVGDIC   87 (404)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCC---EEEESCTT
T ss_pred             CCeEEEeCCCcHHHHHHHHHHHhCCCeEEEEEecCccccccccccccccccchhhhhhhhHhhccCCce---EEEECCCC
Confidence            4799999999999999999999999999999986533110                 0       0111   13356888


Q ss_pred             CCcchhhhcCC--CcEEEECCCCCCCC--CCChhhHHHHHHHhhhhHHHHHHHHHcCCCCC-CcEEEEeeeeeeeeCCCC
Q 018503          106 EEPQWRDCIQG--STAVVNLAGTPIGT--RWSSEIKKEIKESRIRVTSKVVDLINESPEGV-RPSVLVSATALGYYGTSE  180 (355)
Q Consensus       106 ~~~~~~~~~~~--~d~vi~~a~~~~~~--~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~-~~~v~~Ss~~~~~yg~~~  180 (355)
                      |.+.+.+++++  +|+|||+||.....  ..........+++|+.++.++++++.+  .++ ++|||+||.++  ||...
T Consensus        88 d~~~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~--~~~~~~~V~~SS~~v--yg~~~  163 (404)
T 1i24_A           88 DFEFLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKE--FGEECHLVKLGTMGE--YGTPN  163 (404)
T ss_dssp             SHHHHHHHHHHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHH--HCTTCEEEEECCGGG--GCCCS
T ss_pred             CHHHHHHHHhccCCCEEEECCCCCCccchhhCccchhhhHHHHHHHHHHHHHHHHH--hCCCcEEEEeCcHHH--hCCCC
Confidence            99899888886  99999999964221  112222345789999999999999988  566 59999999988  88654


Q ss_pred             CccccCC----------------CCCCChh-HHHHHHHHHHHHhccCCCCeEEEEEecEEEeCCCCcc------------
Q 018503          181 TEVFDES----------------SPSGNDY-LAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGAL------------  231 (355)
Q Consensus       181 ~~~~~e~----------------~~~~~~y-~~k~~~~~~~~~~~~~~~~~~~i~Rp~~i~G~~~~~~------------  231 (355)
                       .+++|+                ..+...| .+|...|.....+....+++++++||+++||++....            
T Consensus       164 -~~~~E~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~ivrp~~v~Gp~~~~~~~~~~~~~~~~~  242 (404)
T 1i24_A          164 -IDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKTDETEMHEELRNRLDY  242 (404)
T ss_dssp             -SCBCSSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECSCCTTGGGSGGGCCCCCC
T ss_pred             -CCCCccccccccccccccccCCCCCCChhHHHHHHHHHHHHHHHHhcCCeEEEEecceeeCCCCCcccccccccccccc
Confidence             345553                1234568 7888777776666555699999999999999975320            


Q ss_pred             ----cchHHHH--HHHhCCCC---CCCCcceecccHHHHHHHHHHHHhCCCC-C--CceEecCCCccCHHHHHHHHHHH-
Q 018503          232 ----AKMIPLF--MMFAGGPL---GSGQQWFSWIHLDDIVNLIYEALSNPSY-R--GVINGTAPNPVRLAEMCDHLGNV-  298 (355)
Q Consensus       232 ----~~~~~~~--~~~~~~~~---~~~~~~~~~i~v~Dva~~~~~~~~~~~~-~--~~~~i~~~~~~s~~el~~~i~~~-  298 (355)
                          ..++..+  ....+.++   +++++.++|+|++|+|++++.+++.+.. +  ++||+++ +++|+.|+++.+++. 
T Consensus       243 ~~~~~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~v~Dva~a~~~~l~~~~~~g~~~~yni~~-~~~s~~e~~~~i~~~~  321 (404)
T 1i24_A          243 DAVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVEIAIANPAKAGEFRVFNQFT-EQFSVNELASLVTKAG  321 (404)
T ss_dssp             STTTCCHHHHHHHHHHHTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHSCCCTTCEEEEEECS-EEEEHHHHHHHHHHHH
T ss_pred             ccchhhHHHHHHHHHHcCCeeEEeCCCCceECcEEHHHHHHHHHHHHhCcccCCCceEEEECC-CCCcHHHHHHHHHHHH
Confidence                1223322  44455553   6788899999999999999999987653 3  4999998 889999999999998 


Q ss_pred             --hCCCCC-CCCcHHHHHHHhcccceeeecCccccchhHHhCCCCCCccCHHHHHHHHh
Q 018503          299 --LGRPSW-LPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPFKYRYVKDALKAIM  354 (355)
Q Consensus       299 --~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~lG~~p~~~~~~~~l~~~~  354 (355)
                        +|.+.. ...|.+.     .+   .......++++|+++|||+|+++ +++++++++
T Consensus       322 ~~~g~~~~~~~~p~~~-----~~---~~~~~~~~d~~k~~~LG~~p~~~-~~~~l~~~~  371 (404)
T 1i24_A          322 SKLGLDVKKMTVPNPR-----VE---AEEHYYNAKHTKLMELGLEPHYL-SDSLLDSLL  371 (404)
T ss_dssp             HTTTCCCCEEEECCSS-----CS---CSSCCCCBCCCHHHHTTCCCCCC-CHHHHHHHH
T ss_pred             HhhCCCccccccCccc-----Cc---cccceEecCHHHHHHcCCCcCcC-HHHHHHHHH
Confidence              676522 2222211     00   01123446778888999999995 999998875

>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*

Probab=100.00  E-value=3.5e-37  Score=279.29  Aligned_cols=296  Identities=16%  Similarity=0.177  Sum_probs=214.3

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhC-CCeEEEEecCCc--hhhccCCC--CCCccCCCeeecCCcchhhhcC--CCcEEEEC
Q 018503           51 MTVSVTGATGFIGRRLVQRLQAD-NHQVRVLTRSRS--KAELIFPG--KKTRFFPGVMIAEEPQWRDCIQ--GSTAVVNL  123 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~-g~~V~~~~r~~~--~~~~~~~~--~~~~~~~~~d~~~~~~~~~~~~--~~d~vi~~  123 (355)
                      ||||||||+||||++|+++|++. |++|++++|+..  ....+...  ........+|+.|.+.+.++++  ++|+|||+
T Consensus         1 MkvlVTGasG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~   80 (361)
T 1kew_A            1 MKILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADICDSAEITRIFEQYQPDAVMHL   80 (361)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred             CEEEEECCCchHhHHHHHHHHhcCCCeEEEEecCCCCCchhhhhhhhcCCCeEEEECCCCCHHHHHHHHhhcCCCEEEEC
Confidence            68999999999999999999998 799999999752  22222111  0000123468889999999987  89999999


Q ss_pred             CCCCCCCCCChhhHHHHHHHhhhhHHHHHHHHHcCCC--CCC-------cEEEEeeeeeeeeCCCCC--c--------cc
Q 018503          124 AGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPE--GVR-------PSVLVSATALGYYGTSET--E--------VF  184 (355)
Q Consensus       124 a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~--~~~-------~~v~~Ss~~~~~yg~~~~--~--------~~  184 (355)
                      |+... ......++...+++|+.++.++++++..  .  +++       +|||+||.++  ||....  .        ++
T Consensus        81 A~~~~-~~~~~~~~~~~~~~Nv~g~~~l~~a~~~--~~~~v~~~~~~~~~iv~~SS~~v--~g~~~~~~~~~~~~~~~~~  155 (361)
T 1kew_A           81 AAESH-VDRSITGPAAFIETNIVGTYALLEVARK--YWSALGEDKKNNFRFHHISTDEV--YGDLPHPDEVENSVTLPLF  155 (361)
T ss_dssp             CSCCC-HHHHHHCTHHHHHHHTHHHHHHHHHHHH--HHHTSCHHHHHHCEEEEEEEGGG--GCCCCCGGGSCTTSCCCCB
T ss_pred             CCCcC-hhhhhhCHHHHHHHHHHHHHHHHHHHHH--hccCcccccccCceEEEeCCHHH--hCCCcccccccccccCCCC
Confidence            99642 1112345567899999999999999998  5  666       9999999988  885432  1        67


Q ss_pred             cCCCCC--CChh-HHHHHHHHHHHHhccCCCCeEEEEEecEEEeCCCCcccchHHHH--HHHhCCCC---CCCCcceecc
Q 018503          185 DESSPS--GNDY-LAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLF--MMFAGGPL---GSGQQWFSWI  256 (355)
Q Consensus       185 ~e~~~~--~~~y-~~k~~~~~~~~~~~~~~~~~~~i~Rp~~i~G~~~~~~~~~~~~~--~~~~~~~~---~~~~~~~~~i  256 (355)
                      +|+.+.  ...| .+|...|.....+..+.+++++++||+.+||+..... .+++.+  ....+.++   ++++..++++
T Consensus       156 ~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~~vrp~~v~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  234 (361)
T 1kew_A          156 TETTAYAPSSPYSASKASSDHLVRAWRRTYGLPTIVTNCSNNYGPYHFPE-KLIPLVILNALEGKPLPIYGKGDQIRDWL  234 (361)
T ss_dssp             CTTSCCCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTCCTT-SHHHHHHHHHHHTCCEEEETTSCCEEEEE
T ss_pred             CCCCCCCCCCccHHHHHHHHHHHHHHHHHhCCcEEEEeeceeECCCCCcc-cHHHHHHHHHHcCCCceEcCCCceeEeeE
Confidence            777653  4567 7888888777776666689999999999999975321 222222  33445443   6778889999


Q ss_pred             cHHHHHHHHHHHHhCCCCCCceEecCCCccCHHHHHHHHHHHhCCCCCCCCcHHHHHHHhcccceeeecCccccchhHHh
Q 018503          257 HLDDIVNLIYEALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKE  336 (355)
Q Consensus       257 ~v~Dva~~~~~~~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~  336 (355)
                      |++|+|++++.++..+..+++||+++++++|+.|+++.+.+.+|.+.....|........... ........++++|+++
T Consensus       235 ~v~Dva~a~~~~~~~~~~g~~~~v~~~~~~s~~e~~~~i~~~~g~~~~~~~p~~~~~~~~~~~-~~~~~~~~~d~~k~~~  313 (361)
T 1kew_A          235 YVEDHARALHMVVTEGKAGETYNIGGHNEKKNLDVVFTICDLLDEIVPKATSYREQITYVADR-PGHDRRYAIDAGKISR  313 (361)
T ss_dssp             EHHHHHHHHHHHHHHCCTTCEEEECCCCEEEHHHHHHHHHHHHHHHSCCSSCGGGGEEEECCC-TTCCCBCCBCCHHHHH
T ss_pred             EHHHHHHHHHHHHhCCCCCCEEEecCCCeeeHHHHHHHHHHHhCCcCccccccccceeecCCC-CcccceeecCHHHHHH
Confidence            999999999999987655679999999999999999999999986522211211000000000 0001234578889965


Q ss_pred             -CCCCCCccCHHHHHHHHh
Q 018503          337 -LGFPFKYRYVKDALKAIM  354 (355)
Q Consensus       337 -lG~~p~~~~~~~~l~~~~  354 (355)
                       |||+|+++ ++++|++++
T Consensus       314 ~lG~~p~~~-~~e~l~~~~  331 (361)
T 1kew_A          314 ELGWKPLET-FESGIRKTV  331 (361)
T ss_dssp             HHCCCCSCC-HHHHHHHHH
T ss_pred             HhCCCCccC-HHHHHHHHH
Confidence             99999996 999999886

>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=5e-37  Score=279.68  Aligned_cols=298  Identities=16%  Similarity=0.128  Sum_probs=217.1

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchh-----hccCC-----CCCCccCCCeeecCCcchhhhcCC--Cc
Q 018503           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKA-----ELIFP-----GKKTRFFPGVMIAEEPQWRDCIQG--ST  118 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-----~~~~~-----~~~~~~~~~~d~~~~~~~~~~~~~--~d  118 (355)
                      |+||||||+||||++|+++|+++|++|++++|+.+..     ..+..     .........+|+.|.+++.+++++  +|
T Consensus        25 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d  104 (375)
T 1t2a_A           25 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEVKPT  104 (375)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHHCCS
T ss_pred             cEEEEECCCchHHHHHHHHHHHCCCEEEEEECCccccchhhHHHHhhhhccccCCCceEEEccCCCHHHHHHHHHhcCCC
Confidence            6899999999999999999999999999999986531     11100     000001234688888888888874  79


Q ss_pred             EEEECCCCCCCCCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCC---CcEEEEeeeeeeeeCCCCCccccCCCCC--CCh
Q 018503          119 AVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGV---RPSVLVSATALGYYGTSETEVFDESSPS--GND  193 (355)
Q Consensus       119 ~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~---~~~v~~Ss~~~~~yg~~~~~~~~e~~~~--~~~  193 (355)
                      +|||+|+.... .....++...+++|+.++.++++++.+  .++   ++|||+||.++  |+.....+++|+++.  ...
T Consensus       105 ~vih~A~~~~~-~~~~~~~~~~~~~N~~g~~~l~~a~~~--~~~~~~~~iv~~SS~~~--~~~~~~~~~~E~~~~~~~~~  179 (375)
T 1t2a_A          105 EIYNLGAQSHV-KISFDLAEYTADVDGVGTLRLLDAVKT--CGLINSVKFYQASTSEL--YGKVQEIPQKETTPFYPRSP  179 (375)
T ss_dssp             EEEECCSCCCH-HHHHHSHHHHHHHHTHHHHHHHHHHHH--TTCTTTCEEEEEEEGGG--TCSCSSSSBCTTSCCCCCSH
T ss_pred             EEEECCCcccc-cccccCHHHHHHHHHHHHHHHHHHHHH--hCCCccceEEEecchhh--hCCCCCCCCCccCCCCCCCh
Confidence            99999996421 112345678889999999999999998  566   79999999998  987666778888764  456


Q ss_pred             h-HHHHHHHHHHHHhccCCCCeEEEEEecEEEeCCCCc--ccchHH-HH-HHHhCCC----CCCCCcceecccHHHHHHH
Q 018503          194 Y-LAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGA--LAKMIP-LF-MMFAGGP----LGSGQQWFSWIHLDDIVNL  264 (355)
Q Consensus       194 y-~~k~~~~~~~~~~~~~~~~~~~i~Rp~~i~G~~~~~--~~~~~~-~~-~~~~~~~----~~~~~~~~~~i~v~Dva~~  264 (355)
                      | .+|...|.....+..+.+++++++||+++|||+...  ....+. .+ ....+..    ++++++.++++|++|+|++
T Consensus       180 Y~~sK~~~e~~~~~~~~~~~~~~~i~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~i~v~Dva~a  259 (375)
T 1t2a_A          180 YGAAKLYAYWIVVNFREAYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWGHAKDYVEA  259 (375)
T ss_dssp             HHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCSCEEESCTTCEECCEEHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHhCCCEEEEecccccCCCCCCCcchHHHHHHHHHHHcCCCceeEeCCCCceeeeEEHHHHHHH
Confidence            7 788888877777766668999999999999997532  111222 22 3334432    2677889999999999999


Q ss_pred             HHHHHhCCCCCCceEecCCCccCHHHHHHHHHHHhCCCCCCC---CcHHHHHHHhcc------c---ceeeecCccccch
Q 018503          265 IYEALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLP---VPEFALKAVLGE------G---AFVVLEGQRVVPA  332 (355)
Q Consensus       265 ~~~~~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~---~~~~~~~~~~~~------~---~~~~~~~~~~~~~  332 (355)
                      ++.+++++. .++||+++++++|+.|+++.+++.+|.+..+.   +|.+......++      .   .........++++
T Consensus       260 ~~~~~~~~~-~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~  338 (375)
T 1t2a_A          260 MWLMLQNDE-PEDFVIATGEVHSVREFVEKSFLHIGKTIVWEGKNENEVGRCKETGKVHVTVDLKYYRPTEVDFLQGDCT  338 (375)
T ss_dssp             HHHHHHSSS-CCCEEECCSCCEEHHHHHHHHHHHTTCCEEEESCGGGCEEEETTTCCEEEEECGGGSCSSCCCBCCBCCH
T ss_pred             HHHHHhcCC-CceEEEeCCCcccHHHHHHHHHHHhCCCcccccccccccccccccccceeecCcccCCcccchhhcCCHH
Confidence            999998765 58999999999999999999999999863221   222211100000      0   0001123456888


Q ss_pred             hHH-hCCCCCCccCHHHHHHHHhC
Q 018503          333 RAK-ELGFPFKYRYVKDALKAIMS  355 (355)
Q Consensus       333 k~~-~lG~~p~~~~~~~~l~~~~~  355 (355)
                      |++ .|||+|+++ ++++|+++++
T Consensus       339 k~~~~lG~~p~~~-l~e~l~~~~~  361 (375)
T 1t2a_A          339 KAKQKLNWKPRVA-FDELVREMVH  361 (375)
T ss_dssp             HHHHHHCCCCCSC-HHHHHHHHHH
T ss_pred             HHHHhcCCCccCC-HHHHHHHHHH
Confidence            896 499999996 9999998863

>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A

Probab=100.00  E-value=7.7e-37  Score=271.85  Aligned_cols=278  Identities=15%  Similarity=0.160  Sum_probs=184.9

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcCC--CcEEEECCCCC
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQG--STAVVNLAGTP  127 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~--~d~vi~~a~~~  127 (355)
                      +|+|||||||||||++|+++|+++|++|++++|+....     .     ...+|+.|++++.+++++  +|+|||+|+..
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-----~-----~~~~Dl~d~~~~~~~~~~~~~d~vih~A~~~   71 (315)
T 2ydy_A            2 NRRVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRARP-----K-----FEQVNLLDSNAVHHIIHDFQPHVIVHCAAER   71 (315)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHTTTCEEEEEC----------------------------CHHHHHHHCCSEEEECC---
T ss_pred             CCeEEEECCCcHHHHHHHHHHHhCCCeEEEEccCCCCC-----C-----eEEecCCCHHHHHHHHHhhCCCEEEECCccc
Confidence            47999999999999999999999999999999876441     0     334799999999988874  89999999964


Q ss_pred             CCCCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCCCCccccCCCCC--CChh-HHHHHHHHHH
Q 018503          128 IGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPS--GNDY-LAEVCREWEG  204 (355)
Q Consensus       128 ~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~--~~~y-~~k~~~~~~~  204 (355)
                      .. .....++...+++|+.++.++++++.+  .++ ++||+||.++  |+. ...+++|+++.  ...| .+|...|...
T Consensus        72 ~~-~~~~~~~~~~~~~n~~~~~~l~~a~~~--~~~-~~v~~SS~~v--~~~-~~~~~~E~~~~~~~~~Y~~sK~~~e~~~  144 (315)
T 2ydy_A           72 RP-DVVENQPDAASQLNVDASGNLAKEAAA--VGA-FLIYISSDYV--FDG-TNPPYREEDIPAPLNLYGKTKLDGEKAV  144 (315)
T ss_dssp             -----------------CHHHHHHHHHHHH--HTC-EEEEEEEGGG--SCS-SSCSBCTTSCCCCCSHHHHHHHHHHHHH
T ss_pred             Ch-hhhhcCHHHHHHHHHHHHHHHHHHHHH--cCC-eEEEEchHHH--cCC-CCCCCCCCCCCCCcCHHHHHHHHHHHHH
Confidence            22 223456678899999999999999998  565 8999999998  886 56678887664  3456 6676666655


Q ss_pred             HHhccCCCCeEEEEEecEEEeCCCCcccchHH-HH-HHH-hCCCC-CCCCcceecccHHHHHHHHHHHHhCC----CCCC
Q 018503          205 TALKVNKDVRLALIRIGIVLGKDGGALAKMIP-LF-MMF-AGGPL-GSGQQWFSWIHLDDIVNLIYEALSNP----SYRG  276 (355)
Q Consensus       205 ~~~~~~~~~~~~i~Rp~~i~G~~~~~~~~~~~-~~-~~~-~~~~~-~~~~~~~~~i~v~Dva~~~~~~~~~~----~~~~  276 (355)
                      ..+    +++++++||+.+||+.......+.. .+ ... .+.++ ..++..++++|++|+|++++.++.++    ..++
T Consensus       145 ~~~----~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~  220 (315)
T 2ydy_A          145 LEN----NLGAAVLRIPILYGEVEKLEESAVTVMFDKVQFSNKSANMDHWQQRFPTHVKDVATVCRQLAEKRMLDPSIKG  220 (315)
T ss_dssp             HHH----CTTCEEEEECSEECSCSSGGGSTTGGGHHHHHCCSSCEEEECSSBBCCEEHHHHHHHHHHHHHHHHTCTTCCE
T ss_pred             HHh----CCCeEEEeeeeeeCCCCcccccHHHHHHHHHHhcCCCeeeccCceECcEEHHHHHHHHHHHHHhhccccCCCC
Confidence            544    4678999999999987642111211 11 222 34433 23567889999999999999998753    3567


Q ss_pred             ceEecCCCccCHHHHHHHHHHHhCCCCC--CCCcHHHHHHHhcccceeeecCccccchhHHhCCCCCCccCHHHHHHHHh
Q 018503          277 VINGTAPNPVRLAEMCDHLGNVLGRPSW--LPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPFKYRYVKDALKAIM  354 (355)
Q Consensus       277 ~~~i~~~~~~s~~el~~~i~~~~g~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~lG~~p~~~~~~~~l~~~~  354 (355)
                      +||+++++++|+.|+++.+.+.+|.+..  .+++.     .... .........++++|++++||+|+++ ++++|++++
T Consensus       221 ~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~-----~~~~-~~~~~~~~~~d~~k~~~~G~~p~~~-~~~~l~~~~  293 (315)
T 2ydy_A          221 TFHWSGNEQMTKYEMACAIADAFNLPSSHLRPITD-----SPVL-GAQRPRNAQLDCSKLETLGIGQRTP-FRIGIKESL  293 (315)
T ss_dssp             EEECCCSCCBCHHHHHHHHHHHTTCCCTTEEEECS-----CCCS-SSCCCSBCCBCCHHHHHTTCCCCCC-HHHHHHHHH
T ss_pred             eEEEcCCCcccHHHHHHHHHHHhCCChhheecccc-----cccc-ccCCCcccccchHHHHhcCCCCCCC-HHHHHHHHH
Confidence            9999999999999999999999998732  22322     0000 0011235667888998779999997 999999986


Q ss_pred             C
Q 018503          355 S  355 (355)
Q Consensus       355 ~  355 (355)
                      +
T Consensus       294 ~  294 (315)
T 2ydy_A          294 W  294 (315)
T ss_dssp             G
T ss_pred             H
Confidence            3

>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2

Probab=100.00  E-value=9.1e-37  Score=275.00  Aligned_cols=287  Identities=17%  Similarity=0.149  Sum_probs=208.7

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCch-h----hccCCCCCCccCCCeeecCCcchhhhcCC--CcEEEEC
Q 018503           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSK-A----ELIFPGKKTRFFPGVMIAEEPQWRDCIQG--STAVVNL  123 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~-~----~~~~~~~~~~~~~~~d~~~~~~~~~~~~~--~d~vi~~  123 (355)
                      |+|||||||||||++|+++|++.|++|++++|+... .    ..+..... .....+|+.|.+++.+++++  +|+|||+
T Consensus         2 ~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~~~-~~~~~~Dl~d~~~~~~~~~~~~~d~vih~   80 (347)
T 1orr_A            2 AKLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSLGN-FEFVHGDIRNKNDVTRLITKYMPDSCFHL   80 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHTTCC-CEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred             cEEEEeCCCchhHHHHHHHHHhCCCEEEEEeCCCccCchhhhhhhccCCc-eEEEEcCCCCHHHHHHHHhccCCCEEEEC
Confidence            689999999999999999999999999999985421 1    11111000 01345688899999999987  9999999


Q ss_pred             CCCCCCCCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCC-cEEEEeeeeeeeeCCCCCcc----------------ccC
Q 018503          124 AGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVR-PSVLVSATALGYYGTSETEV----------------FDE  186 (355)
Q Consensus       124 a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~-~~v~~Ss~~~~~yg~~~~~~----------------~~e  186 (355)
                      |+.... .....++...+++|+.++.++++++.+  .+++ +|||+||.++  ||.....+                ++|
T Consensus        81 A~~~~~-~~~~~~~~~~~~~nv~~~~~l~~a~~~--~~~~~~iv~~SS~~v--~g~~~~~~~~e~~~~~~~~~~~~~~~e  155 (347)
T 1orr_A           81 AGQVAM-TTSIDNPCMDFEINVGGTLNLLEAVRQ--YNSNCNIIYSSTNKV--YGDLEQYKYNETETRYTCVDKPNGYDE  155 (347)
T ss_dssp             CCCCCH-HHHHHCHHHHHHHHHHHHHHHHHHHHH--HCTTCEEEEEEEGGG--GTTCTTSCEEECSSCEEETTCTTCBCT
T ss_pred             CcccCh-hhhhhCHHHHHHHHHHHHHHHHHHHHH--hCCCceEEEeccHHH--hCCCCcCCcccccccccccccccCccc
Confidence            996421 112345678899999999999999988  5665 8999999998  88644332                445


Q ss_pred             CCCC--CChh-HHHHHHHHHHHHhccCCCCeEEEEEecEEEeCCCCcc--cchHHHH--HHHhCC-----C---CCCCCc
Q 018503          187 SSPS--GNDY-LAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGAL--AKMIPLF--MMFAGG-----P---LGSGQQ  251 (355)
Q Consensus       187 ~~~~--~~~y-~~k~~~~~~~~~~~~~~~~~~~i~Rp~~i~G~~~~~~--~~~~~~~--~~~~~~-----~---~~~~~~  251 (355)
                      +.+.  ...| .+|...|.....+..+.+++++++||+.+||+.....  ..+++.+  ....+.     +   ++++++
T Consensus       156 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~  235 (347)
T 1orr_A          156 STQLDFHSPYGCSKGAADQYMLDYARIFGLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGINKPFTISGNGKQ  235 (347)
T ss_dssp             TSCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTCCCBTTBCHHHHHHHHHHHHHTTCCCCEEEESSSCC
T ss_pred             cCCCCCCCchHHHHHHHHHHHHHHHHHhCCcEEEEccCceeCcCCCCCCcCcHHHHHHHHHHhCcccCCCCeEEecCCcc
Confidence            4443  3457 7787777777766665699999999999999975321  1122221  222222     3   267889


Q ss_pred             ceecccHHHHHHHHHHHHhCC-C-CCCceEecCCC--ccCHHHHHHHHHHHhCCCCCC-CCcHHHHHHHhcccceeeecC
Q 018503          252 WFSWIHLDDIVNLIYEALSNP-S-YRGVINGTAPN--PVRLAEMCDHLGNVLGRPSWL-PVPEFALKAVLGEGAFVVLEG  326 (355)
Q Consensus       252 ~~~~i~v~Dva~~~~~~~~~~-~-~~~~~~i~~~~--~~s~~el~~~i~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~  326 (355)
                      .++++|++|+|++++.++..+ . .+++||++++.  ++|+.|+++.+.+.+|.+..+ ..|.     ...+     ...
T Consensus       236 ~~~~i~v~Dva~a~~~~~~~~~~~~g~~~~v~~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~-----~~~~-----~~~  305 (347)
T 1orr_A          236 VRDVLHAEDMISLYFTALANVSKIRGNAFNIGGTIVNSLSLLELFKLLEDYCNIDMRFTNLPV-----RESD-----QRV  305 (347)
T ss_dssp             EEECEEHHHHHHHHHHHHHTHHHHTTCEEEESSCGGGEEEHHHHHHHHHHHHTCCCCEEEECC-----CSSC-----CSE
T ss_pred             eEeeEEHHHHHHHHHHHHhccccCCCCEEEeCCCCCCCccHHHHHHHHHHHhCCCCCceeCCC-----CCCC-----cce
Confidence            999999999999999999852 2 45699999986  499999999999999987322 2221     0111     123


Q ss_pred             ccccchhHH-hCCCCCCccCHHHHHHHHh
Q 018503          327 QRVVPARAK-ELGFPFKYRYVKDALKAIM  354 (355)
Q Consensus       327 ~~~~~~k~~-~lG~~p~~~~~~~~l~~~~  354 (355)
                      ..++++|++ .|||+|+++ ++++|++++
T Consensus       306 ~~~d~~k~~~~lG~~p~~~-~~e~l~~~~  333 (347)
T 1orr_A          306 FVADIKKITNAIDWSPKVS-AKDGVQKMY  333 (347)
T ss_dssp             ECBCCHHHHHHHCCCCCSC-HHHHHHHHH
T ss_pred             eecCHHHHHHHHCCCccCC-HHHHHHHHH
Confidence            456778885 599999986 999999886

>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*

Probab=100.00  E-value=1.8e-36  Score=272.77  Aligned_cols=299  Identities=14%  Similarity=0.102  Sum_probs=217.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhc--c--CCCCCCccCCCeeecCCcchhhhcCC--CcEEEE
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAEL--I--FPGKKTRFFPGVMIAEEPQWRDCIQG--STAVVN  122 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~--~--~~~~~~~~~~~~d~~~~~~~~~~~~~--~d~vi~  122 (355)
                      ++|+|||||||||||++|+++|+++|++|++++|+.+....  +  ...........+|+.|.+++.+++++  +|+|||
T Consensus         2 ~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih   81 (345)
T 2z1m_A            2 SGKRALITGIRGQDGAYLAKLLLEKGYEVYGADRRSGEFASWRLKELGIENDVKIIHMDLLEFSNIIRTIEKVQPDEVYN   81 (345)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCCSTTTTHHHHHTTCTTTEEECCCCTTCHHHHHHHHHHHCCSEEEE
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccccccHhhccccCceeEEECCCCCHHHHHHHHHhcCCCEEEE
Confidence            35799999999999999999999999999999998764321  0  00000011345788899999888874  699999


Q ss_pred             CCCCCCCCCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCC-CcEEEEeeeeeeeeCCCCCccccCCCCC--CChh-HHHH
Q 018503          123 LAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGV-RPSVLVSATALGYYGTSETEVFDESSPS--GNDY-LAEV  198 (355)
Q Consensus       123 ~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~-~~~v~~Ss~~~~~yg~~~~~~~~e~~~~--~~~y-~~k~  198 (355)
                      +|+... ...+..++...+++|+.++.++++++.+  .++ ++|||+||.++  ||.....+++|+.+.  ...| .+|.
T Consensus        82 ~A~~~~-~~~~~~~~~~~~~~Nv~g~~~l~~a~~~--~~~~~~iv~~SS~~v--yg~~~~~~~~e~~~~~~~~~Y~~sK~  156 (345)
T 2z1m_A           82 LAAQSF-VGVSFEQPILTAEVDAIGVLRILEALRT--VKPDTKFYQASTSEM--FGKVQEIPQTEKTPFYPRSPYAVAKL  156 (345)
T ss_dssp             CCCCCC-HHHHTTSHHHHHHHHTHHHHHHHHHHHH--HCTTCEEEEEEEGGG--GCSCSSSSBCTTSCCCCCSHHHHHHH
T ss_pred             CCCCcc-hhhhhhCHHHHHHHHHHHHHHHHHHHHH--hCCCceEEEEechhh--cCCCCCCCCCccCCCCCCChhHHHHH
Confidence            999642 1112345678899999999999999988  565 79999999998  997777778887654  4567 7888


Q ss_pred             HHHHHHHHhccCCCCeEEEEEecEEEeCCCCc--ccchHHH-H-HHHhCCC----CCCCCcceecccHHHHHHHHHHHHh
Q 018503          199 CREWEGTALKVNKDVRLALIRIGIVLGKDGGA--LAKMIPL-F-MMFAGGP----LGSGQQWFSWIHLDDIVNLIYEALS  270 (355)
Q Consensus       199 ~~~~~~~~~~~~~~~~~~i~Rp~~i~G~~~~~--~~~~~~~-~-~~~~~~~----~~~~~~~~~~i~v~Dva~~~~~~~~  270 (355)
                      ..|.....+..+.+++++++|++++|||+...  ....+.. + ....+..    .+.++..++++|++|+|++++.+++
T Consensus       157 ~~e~~~~~~~~~~~~~~~~~r~~~~~gpg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~Dva~a~~~~~~  236 (345)
T 2z1m_A          157 FGHWITVNYREAYNMFACSGILFNHESPLRGIEFVTRKITYSLARIKYGLQDKLVLGNLNAKRDWGYAPEYVEAMWLMMQ  236 (345)
T ss_dssp             HHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEECCEEHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHhCCceEeeeeeeecCCCCCCcchhHHHHHHHHHHHcCCCCeeeeCCCCceeeeEEHHHHHHHHHHHHh
Confidence            88877777766668999999999999997532  1121211 2 2233432    2667788999999999999999998


Q ss_pred             CCCCCCceEecCCCccCHHHHHHHHHHHhCCCCCCC---CcHHHHHHHhccc---------ceeeecCccccchhHH-hC
Q 018503          271 NPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLP---VPEFALKAVLGEG---------AFVVLEGQRVVPARAK-EL  337 (355)
Q Consensus       271 ~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~---~~~~~~~~~~~~~---------~~~~~~~~~~~~~k~~-~l  337 (355)
                      ++. .++||+++++++|+.|+++.+.+.+|.+..+.   +|.+......++.         .........++++|++ .+
T Consensus       237 ~~~-~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~l  315 (345)
T 2z1m_A          237 QPE-PDDYVIATGETHTVREFVEKAAKIAGFDIEWVGEGINEKGIDRNTGKVIVEVSEEFFRPAEVDILVGNPEKAMKKL  315 (345)
T ss_dssp             SSS-CCCEEECCSCCEEHHHHHHHHHHHTTCCEEEESCGGGCEEEETTTCCEEEEECGGGSCSSCCCBCCBCCHHHHHHH
T ss_pred             CCC-CceEEEeCCCCccHHHHHHHHHHHhCCCccccccccccccccccccccccccCcccCCCCCcceeecCHHHHHHHc
Confidence            765 58999999999999999999999999863221   2222111000000         0001123456788896 59


Q ss_pred             CCCCCccCHHHHHHHHh
Q 018503          338 GFPFKYRYVKDALKAIM  354 (355)
Q Consensus       338 G~~p~~~~~~~~l~~~~  354 (355)
                      ||+|+++ ++++|++++
T Consensus       316 G~~p~~~-~~~~l~~~~  331 (345)
T 2z1m_A          316 GWKPRTT-FDELVEIMM  331 (345)
T ss_dssp             CCCCCSC-HHHHHHHHH
T ss_pred             CCcccCC-HHHHHHHHH
Confidence            9999985 999999886

>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*

Probab=100.00  E-value=1.9e-36  Score=271.93  Aligned_cols=288  Identities=19%  Similarity=0.246  Sum_probs=208.8

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhc----cCC-CCCCccCCCeeecCCcchhhhcC--CCcEEEEC
Q 018503           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAEL----IFP-GKKTRFFPGVMIAEEPQWRDCIQ--GSTAVVNL  123 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~----~~~-~~~~~~~~~~d~~~~~~~~~~~~--~~d~vi~~  123 (355)
                      |+||||||+||||++|+++|+++|++|++++|.......    +.. .........+|+.|++++.++++  ++|+|||+
T Consensus         1 m~vlVTGatG~iG~~l~~~L~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~D~vih~   80 (338)
T 1udb_A            1 MRVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEILHDHAIDTVIHF   80 (338)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTCHHHHHHHHHHTTCSEEEEC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCCcchhHHHHHHhhcCCcceEEEccCCCHHHHHHHhhccCCCEEEEC
Confidence            689999999999999999999999999999875432110    000 00000134468889888888886  59999999


Q ss_pred             CCCCCCCCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCCCCccccCCCCC---CChh-HHHHH
Q 018503          124 AGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPS---GNDY-LAEVC  199 (355)
Q Consensus       124 a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~---~~~y-~~k~~  199 (355)
                      ||..... .....+...+++|+.++.++++++++  .++++||++||.++  ||.....+++|+.+.   ...| .+|..
T Consensus        81 A~~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~--~~~~~iv~~SS~~~--~g~~~~~~~~e~~~~~~~~~~Y~~sK~~  155 (338)
T 1udb_A           81 AGLKAVG-ESVQKPLEYYDNNVNGTLRLISAMRA--ANVKNFIFSSSATV--YGDNPKIPYVESFPTGTPQSPYGKSKLM  155 (338)
T ss_dssp             CSCCCHH-HHHHCHHHHHHHHHHHHHHHHHHHHH--HTCCEEEEEEEGGG--GCSCCSSSBCTTSCCCCCSSHHHHHHHH
T ss_pred             CccCccc-cchhcHHHHHHHHHHHHHHHHHHHHh--cCCCeEEEEccHHH--hCCCCCCCcCcccCCCCCCChHHHHHHH
Confidence            9964211 12234567889999999999999988  67889999999988  987666677887664   4568 78887


Q ss_pred             HHHHHHHhccCC-CCeEEEEEecEEEeCCCC------c---ccchHHHH-HHHh--CCCC---------CCCCcceeccc
Q 018503          200 REWEGTALKVNK-DVRLALIRIGIVLGKDGG------A---LAKMIPLF-MMFA--GGPL---------GSGQQWFSWIH  257 (355)
Q Consensus       200 ~~~~~~~~~~~~-~~~~~i~Rp~~i~G~~~~------~---~~~~~~~~-~~~~--~~~~---------~~~~~~~~~i~  257 (355)
                      .|.+...+..+. +++++++||+++||+...      .   ...+.+.+ ....  +.++         .++++.++|+|
T Consensus       156 ~e~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~i~  235 (338)
T 1udb_A          156 VEQILTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIH  235 (338)
T ss_dssp             HHHHHHHHHHHSTTCEEEEEEECEEECCCTTSSSCCCCCSSCCSHHHHHHHHHHTSSSCEEEECSCSSSSSSSCEECEEE
T ss_pred             HHHHHHHHHHhcCCCceEEEeeceecCCCcccccccccccchhhHHHHHHHHHHhcCCCcEEecCcccCCCCceeeeeEE
Confidence            787776665544 899999999999998421      0   12334433 2222  2221         25678899999


Q ss_pred             HHHHHHHHHHHHhCC--CCC-CceEecCCCccCHHHHHHHHHHHhCCCCCCC-CcHHHHHHHhcccceeeecCccccchh
Q 018503          258 LDDIVNLIYEALSNP--SYR-GVINGTAPNPVRLAEMCDHLGNVLGRPSWLP-VPEFALKAVLGEGAFVVLEGQRVVPAR  333 (355)
Q Consensus       258 v~Dva~~~~~~~~~~--~~~-~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~k  333 (355)
                      ++|+|++++.+++..  ..+ ++||+++++++|+.|+++.+.+.+|.+..+. .|.     ..++.     ....++++|
T Consensus       236 v~Dva~a~~~~l~~~~~~~~~~~yni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~-----~~~~~-----~~~~~d~~k  305 (338)
T 1udb_A          236 VMDLADGHVVAMEKLANKPGVHIYNLGAGVGNSVLDVVNAFSKACGKPVNYHFAPR-----REGDL-----PAYWADASK  305 (338)
T ss_dssp             HHHHHHHHHHHHHHHTTCCEEEEEEESCSCCEEHHHHHHHHHHHHTSCCCEEEECC-----CTTCC-----SBCCBCCHH
T ss_pred             HHHHHHHHHHHHhhhhccCCCcEEEecCCCceeHHHHHHHHHHHhCCCCcceeCCC-----CCCch-----hhhhcCHHH
Confidence            999999999998753  222 5999999999999999999999999763221 111     01111     234567788


Q ss_pred             HH-hCCCCCCccCHHHHHHHHh
Q 018503          334 AK-ELGFPFKYRYVKDALKAIM  354 (355)
Q Consensus       334 ~~-~lG~~p~~~~~~~~l~~~~  354 (355)
                      ++ .|||+|+++ ++++|++++
T Consensus       306 ~~~~lG~~p~~~-l~~~l~~~~  326 (338)
T 1udb_A          306 ADRELNWRVTRT-LDEMAQDTW  326 (338)
T ss_dssp             HHHHHCCCCCCC-HHHHHHHHH
T ss_pred             HHHHcCCCcCCC-HHHHHHHHH
Confidence            85 599999996 999999886

>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2

Probab=100.00  E-value=8.2e-37  Score=268.77  Aligned_cols=266  Identities=14%  Similarity=0.104  Sum_probs=205.0

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcC--CCcEEEECCCCC
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ--GSTAVVNLAGTP  127 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--~~d~vi~~a~~~  127 (355)
                      .|+|||||||||||++|+++|+++|++|++++|+.                 +|+.|.+.+.++++  ++|+|||+|+..
T Consensus        12 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~-----------------~Dl~d~~~~~~~~~~~~~d~vih~A~~~   74 (292)
T 1vl0_A           12 HMKILITGANGQLGREIQKQLKGKNVEVIPTDVQD-----------------LDITNVLAVNKFFNEKKPNVVINCAAHT   74 (292)
T ss_dssp             CEEEEEESTTSHHHHHHHHHHTTSSEEEEEECTTT-----------------CCTTCHHHHHHHHHHHCCSEEEECCCCC
T ss_pred             cceEEEECCCChHHHHHHHHHHhCCCeEEeccCcc-----------------CCCCCHHHHHHHHHhcCCCEEEECCccC
Confidence            47999999999999999999999999999999961                 58888999999887  799999999964


Q ss_pred             CCCCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCCCCccccCCCCCC--Chh-HHHHHHHHHH
Q 018503          128 IGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSG--NDY-LAEVCREWEG  204 (355)
Q Consensus       128 ~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~--~~y-~~k~~~~~~~  204 (355)
                      .. .....++...+++|+.++.++++++.+  .++ ++||+||.++  |+.....+++|+++..  ..| .+|...|...
T Consensus        75 ~~-~~~~~~~~~~~~~nv~~~~~l~~a~~~--~~~-~iv~~SS~~v--~~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~  148 (292)
T 1vl0_A           75 AV-DKCEEQYDLAYKINAIGPKNLAAAAYS--VGA-EIVQISTDYV--FDGEAKEPITEFDEVNPQSAYGKTKLEGENFV  148 (292)
T ss_dssp             CH-HHHHHCHHHHHHHHTHHHHHHHHHHHH--HTC-EEEEEEEGGG--SCSCCSSCBCTTSCCCCCSHHHHHHHHHHHHH
T ss_pred             CH-HHHhcCHHHHHHHHHHHHHHHHHHHHH--cCC-eEEEechHHe--ECCCCCCCCCCCCCCCCccHHHHHHHHHHHHH
Confidence            21 122355678899999999999999998  566 9999999998  9876667888887653  457 6776666666


Q ss_pred             HHhccCCCCeEEEEEecEEEeCCCCcccchHHHH--HHHhCCCC-CCCCcceecccHHHHHHHHHHHHhCCCCCCceEec
Q 018503          205 TALKVNKDVRLALIRIGIVLGKDGGALAKMIPLF--MMFAGGPL-GSGQQWFSWIHLDDIVNLIYEALSNPSYRGVINGT  281 (355)
Q Consensus       205 ~~~~~~~~~~~~i~Rp~~i~G~~~~~~~~~~~~~--~~~~~~~~-~~~~~~~~~i~v~Dva~~~~~~~~~~~~~~~~~i~  281 (355)
                      ..+.    .+++++||+.+||+ ...   +...+  ....+.++ ..++..++++|++|+|++++.++..+ .+++||++
T Consensus       149 ~~~~----~~~~~lR~~~v~G~-~~~---~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~-~~~~~~i~  219 (292)
T 1vl0_A          149 KALN----PKYYIVRTAWLYGD-GNN---FVKTMINLGKTHDELKVVHDQVGTPTSTVDLARVVLKVIDEK-NYGTFHCT  219 (292)
T ss_dssp             HHHC----SSEEEEEECSEESS-SSC---HHHHHHHHHHHCSEEEEESSCEECCEEHHHHHHHHHHHHHHT-CCEEEECC
T ss_pred             HhhC----CCeEEEeeeeeeCC-CcC---hHHHHHHHHhcCCcEEeecCeeeCCccHHHHHHHHHHHHhcC-CCcEEEec
Confidence            5543    47999999999999 322   22222  22344443 23457899999999999999999876 67899999


Q ss_pred             CCCccCHHHHHHHHHHHhCCCCC-CCCcHHHHHHHhcccceeeecCccccchhHHh-CCCCCCccCHHHHHHHHh
Q 018503          282 APNPVRLAEMCDHLGNVLGRPSW-LPVPEFALKAVLGEGAFVVLEGQRVVPARAKE-LGFPFKYRYVKDALKAIM  354 (355)
Q Consensus       282 ~~~~~s~~el~~~i~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~-lG~~p~~~~~~~~l~~~~  354 (355)
                      +++++|+.|+++.+.+.+|.+.. .++|.+.......     ......++++|+++ |||+|+  +++++|++++
T Consensus       220 ~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~-----~~~~~~~d~~k~~~~lG~~p~--~~~~~l~~~~  287 (292)
T 1vl0_A          220 CKGICSWYDFAVEIFRLTGIDVKVTPCTTEEFPRPAK-----RPKYSVLRNYMLELTTGDITR--EWKESLKEYI  287 (292)
T ss_dssp             CBSCEEHHHHHHHHHHHHCCCCEEEEECSTTSCCSSC-----CCSBCCBCCHHHHHTTCCCCC--BHHHHHHHHH
T ss_pred             CCCCccHHHHHHHHHHHhCCCCceeeccccccCcccC-----CCccccccHHHHHHHcCCCCC--CHHHHHHHHH
Confidence            99999999999999999997632 2333221110000     12345678888976 999999  4999999886

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}

Probab=100.00  E-value=3.9e-35  Score=261.62  Aligned_cols=288  Identities=17%  Similarity=0.230  Sum_probs=198.1

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhCCCeEEEEec-CCch---hhccCCCCC---CccCCCeeecCCcchhhhcCCCcEEEEC
Q 018503           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTR-SRSK---AELIFPGKK---TRFFPGVMIAEEPQWRDCIQGSTAVVNL  123 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r-~~~~---~~~~~~~~~---~~~~~~~d~~~~~~~~~~~~~~d~vi~~  123 (355)
                      |+|||||||||||++|+++|+++|++|++++| +++.   ...+.....   ......+|+.|++++.++++++|+|||+
T Consensus         2 k~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih~   81 (322)
T 2p4h_X            2 GRVCVTGGTGFLGSWIIKSLLENGYSVNTTIRADPERKRDVSFLTNLPGASEKLHFFNADLSNPDSFAAAIEGCVGIFHT   81 (322)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEECCCC----CCCHHHHTSTTHHHHEEECCCCTTCGGGGHHHHTTCSEEEEC
T ss_pred             CEEEEECChhHHHHHHHHHHHHCCCEEEEEEeCCccchhHHHHHHhhhccCCceEEEecCCCCHHHHHHHHcCCCEEEEc
Confidence            68999999999999999999999999999998 5432   111100000   0013457999999999999999999999


Q ss_pred             CCCCCCCCCChhh-HHHHHHHhhhhHHHHHHHHHcCCC-CCCcEEEEeeeeeeeeCCC-CCccccCCCCC----------
Q 018503          124 AGTPIGTRWSSEI-KKEIKESRIRVTSKVVDLINESPE-GVRPSVLVSATALGYYGTS-ETEVFDESSPS----------  190 (355)
Q Consensus       124 a~~~~~~~~~~~~-~~~~~~~n~~~~~~l~~a~~~~~~-~~~~~v~~Ss~~~~~yg~~-~~~~~~e~~~~----------  190 (355)
                      |+..   .+...+ ...++++|+.++.++++++.+  . ++++|||+||.++. |+.. ...+++|+++.          
T Consensus        82 A~~~---~~~~~~~~~~~~~~nv~gt~~l~~aa~~--~~~~~~iV~~SS~~~~-~~~~~~~~~~~e~~~~~~~~~~~~~p  155 (322)
T 2p4h_X           82 ASPI---DFAVSEPEEIVTKRTVDGALGILKACVN--SKTVKRFIYTSSGSAV-SFNGKDKDVLDESDWSDVDLLRSVKP  155 (322)
T ss_dssp             CCCC-----------CHHHHHHHHHHHHHHHHHTT--CSSCCEEEEEEEGGGT-SCSSSCCSEECTTCCCCHHHHHHHCC
T ss_pred             CCcc---cCCCCChHHHHHHHHHHHHHHHHHHHHh--cCCccEEEEeccHHHc-ccCCCCCeecCCccccchhhhcccCc
Confidence            9742   222222 235889999999999999998  5 68899999998752 3322 23456666532          


Q ss_pred             CC-hh-HHHHHHHHHHHHhccCCCCeEEEEEecEEEeCCCCc-ccchHHHH-HHHhCCCCCCCCcceecccHHHHHHHHH
Q 018503          191 GN-DY-LAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGA-LAKMIPLF-MMFAGGPLGSGQQWFSWIHLDDIVNLIY  266 (355)
Q Consensus       191 ~~-~y-~~k~~~~~~~~~~~~~~~~~~~i~Rp~~i~G~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~i~v~Dva~~~~  266 (355)
                      .. .| .+|...|.....+...++++++++||+++||+.... ........ ....+....-+...++++|++|+|++++
T Consensus       156 ~~~~Y~~sK~~~e~~~~~~~~~~gi~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~i~v~Dva~a~~  235 (322)
T 2p4h_X          156 FGWNYAVSKTLAEKAVLEFGEQNGIDVVTLILPFIVGRFVCPKLPDSIEKALVLVLGKKEQIGVTRFHMVHVDDVARAHI  235 (322)
T ss_dssp             TTHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECEEESCCCSSSCCHHHHHHTHHHHSCGGGCCEEEEEEEEHHHHHHHHH
T ss_pred             ccccHHHHHHHHHHHHHHHHHhcCCcEEEEcCCceECCCCCCCCCchHHHHHHHHhCCCccCcCCCcCEEEHHHHHHHHH
Confidence            11 48 788877777666655579999999999999997532 11122111 2233432211113348999999999999


Q ss_pred             HHHhCCCCCCceEecCCCccCHHHHHHHHHHHhCCCCCCCCcHHHHHHHhcccceeeecCccccchhHHhCCCCCCccCH
Q 018503          267 EALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPFKYRYV  346 (355)
Q Consensus       267 ~~~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~lG~~p~~~~~  346 (355)
                      .++..+...|.|| ++++++|+.|+++.+.+.++.   .++|...   .......  .....++++|+++|||+|+++ +
T Consensus       236 ~~~~~~~~~g~~~-~~~~~~s~~e~~~~i~~~~~~---~~~~~~~---~~~~~~~--~~~~~~d~~k~~~lG~~p~~~-~  305 (322)
T 2p4h_X          236 YLLENSVPGGRYN-CSPFIVPIEEMSQLLSAKYPE---YQILTVD---ELKEIKG--ARLPDLNTKKLVDAGFDFKYT-I  305 (322)
T ss_dssp             HHHHSCCCCEEEE-CCCEEEEHHHHHHHHHHHCTT---SCCCCTT---TTTTCCC--EECCEECCHHHHHTTCCCCCC-H
T ss_pred             HHhhCcCCCCCEE-EcCCCCCHHHHHHHHHHhCCC---CCCCCCc---cccCCCC--CcceecccHHHHHhCCccCCC-H
Confidence            9998765556798 567889999999999988742   1222110   0111111  145667889998899999996 9


Q ss_pred             HHHHHHHh
Q 018503          347 KDALKAIM  354 (355)
Q Consensus       347 ~~~l~~~~  354 (355)
                      +++|++++
T Consensus       306 ~~~l~~~~  313 (322)
T 2p4h_X          306 EDMFDDAI  313 (322)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHH
Confidence            99999986

>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*

Probab=100.00  E-value=5.9e-37  Score=270.61  Aligned_cols=274  Identities=12%  Similarity=0.071  Sum_probs=205.0

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcCC--CcEEEECCCCCC
Q 018503           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQG--STAVVNLAGTPI  128 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~--~d~vi~~a~~~~  128 (355)
                      |+|||||||||||++|+++|+ +|++|++++|+..             ...+|+.|.+.+.+++++  +|+|||+|+...
T Consensus         1 m~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~-------------~~~~D~~d~~~~~~~~~~~~~d~vih~a~~~~   66 (299)
T 1n2s_A            1 MNILLFGKTGQVGWELQRSLA-PVGNLIALDVHSK-------------EFCGDFSNPKGVAETVRKLRPDVIVNAAAHTA   66 (299)
T ss_dssp             CEEEEECTTSHHHHHHHHHTT-TTSEEEEECTTCS-------------SSCCCTTCHHHHHHHHHHHCCSEEEECCCCCC
T ss_pred             CeEEEECCCCHHHHHHHHHhh-cCCeEEEeccccc-------------cccccCCCHHHHHHHHHhcCCCEEEECcccCC
Confidence            689999999999999999999 8999999999762             334799999999998875  999999998642


Q ss_pred             CCCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCCCCccccCCCCCC--Chh-HHHHHHHHHHH
Q 018503          129 GTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSG--NDY-LAEVCREWEGT  205 (355)
Q Consensus       129 ~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~--~~y-~~k~~~~~~~~  205 (355)
                      . .....++...+++|+.++.++++++++  .++ ++||+||.++  ||...+.+++|+++..  ..| .+|...|....
T Consensus        67 ~-~~~~~~~~~~~~~n~~~~~~l~~a~~~--~~~-~~v~~SS~~v--y~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~  140 (299)
T 1n2s_A           67 V-DKAESEPELAQLLNATSVEAIAKAANE--TGA-WVVHYSTDYV--FPGTGDIPWQETDATSPLNVYGKTKLAGEKALQ  140 (299)
T ss_dssp             H-HHHTTCHHHHHHHHTHHHHHHHHHHTT--TTC-EEEEEEEGGG--SCCCTTCCBCTTSCCCCSSHHHHHHHHHHHHHH
T ss_pred             H-hhhhcCHHHHHHHHHHHHHHHHHHHHH--cCC-cEEEEecccE--EeCCCCCCCCCCCCCCCccHHHHHHHHHHHHHH
Confidence            1 112345678899999999999999998  566 7999999998  9977777888887654  456 66766666665


Q ss_pred             HhccCCCCeEEEEEecEEEeCCCCcccchHHHH--HHHhCCCC-CCCCcceecccHHHHHHHHHHHHhCC--C--CCCce
Q 018503          206 ALKVNKDVRLALIRIGIVLGKDGGALAKMIPLF--MMFAGGPL-GSGQQWFSWIHLDDIVNLIYEALSNP--S--YRGVI  278 (355)
Q Consensus       206 ~~~~~~~~~~~i~Rp~~i~G~~~~~~~~~~~~~--~~~~~~~~-~~~~~~~~~i~v~Dva~~~~~~~~~~--~--~~~~~  278 (355)
                      .+.    .+++++||+++||++...   +...+  ....+.++ ..+++.++++|++|+|++++.+++++  .  .+++|
T Consensus       141 ~~~----~~~~ilRp~~v~G~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~~~~~~~~~  213 (299)
T 1n2s_A          141 DNC----PKHLIFRTSWVYAGKGNN---FAKTMLRLAKERQTLSVINDQYGAPTGAELLADCTAHAIRVALNKPEVAGLY  213 (299)
T ss_dssp             HHC----SSEEEEEECSEECSSSCC---HHHHHHHHHHHCSEEEEECSCEECCEEHHHHHHHHHHHHHHHHHCGGGCEEE
T ss_pred             HhC----CCeEEEeeeeecCCCcCc---HHHHHHHHHhcCCCEEeecCcccCCeeHHHHHHHHHHHHHHhccccccCceE
Confidence            543    389999999999997542   22222  23345543 23457899999999999999999875  2  36799


Q ss_pred             EecCCCccCHHHHHHHHHHHhCCCC-CCCCcHH--HHHHHhcccceeeecCccccchhHHh-CCCCCCccCHHHHHHHHh
Q 018503          279 NGTAPNPVRLAEMCDHLGNVLGRPS-WLPVPEF--ALKAVLGEGAFVVLEGQRVVPARAKE-LGFPFKYRYVKDALKAIM  354 (355)
Q Consensus       279 ~i~~~~~~s~~el~~~i~~~~g~~~-~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~k~~~-lG~~p~~~~~~~~l~~~~  354 (355)
                      |+++++++|+.|+++.+.+.+|.+. .++.+..  .....+... ........++++|+++ |||+|+  +++++|++++
T Consensus       214 ~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~d~~k~~~~lG~~p~--~~~~~l~~~~  290 (299)
T 1n2s_A          214 HLVAGGTTTWHDYAALVFDEARKAGITLALTELNAVPTSAYPTP-ASRPGNSRLNTEKFQRNFDLILP--QWELGVKRML  290 (299)
T ss_dssp             ECCCBSCEEHHHHHHHHHHHHHHHTCCCCCCEEEEECSTTSCCS-SCCCSBCCBCCHHHHHHHTCCCC--BHHHHHHHHH
T ss_pred             EEeCCCCCCHHHHHHHHHHHhCCCccccccccccccccccccCc-CCCCCceeeeHHHHHHhcCCCCC--CHHHHHHHHH
Confidence            9999999999999999999998652 1111100  000000000 0112345678888965 899998  4999999886

>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}

Probab=100.00  E-value=1e-35  Score=267.72  Aligned_cols=292  Identities=14%  Similarity=0.101  Sum_probs=214.5

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHhCC-------CeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhc-CCCcE
Q 018503           48 ASQMTVSVTGATGFIGRRLVQRLQADN-------HQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCI-QGSTA  119 (355)
Q Consensus        48 ~~~~~IlVtGatG~iG~~l~~~L~~~g-------~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~-~~~d~  119 (355)
                      +++|+||||||+||||++|+++|+++|       ++|++++|+.........  .......+|+.|.+.+.+++ .++|+
T Consensus        12 ~~~~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r~~~~~~~~~~--~~~~~~~~Dl~d~~~~~~~~~~~~d~   89 (342)
T 2hrz_A           12 FQGMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAPAGFS--GAVDARAADLSAPGEAEKLVEARPDV   89 (342)
T ss_dssp             CSCEEEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEESSCCCCCTTCC--SEEEEEECCTTSTTHHHHHHHTCCSE
T ss_pred             ccCCEEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEccCCccccccC--CceeEEEcCCCCHHHHHHHHhcCCCE
Confidence            345799999999999999999999999       899999998654321100  00013346888999999888 58999


Q ss_pred             EEECCCCCCCCCCChhhHHHHHHHhhhhHHHHHHHHHcCCCC-----CCcEEEEeeeeeeeeCCCCCccccCCCCC--CC
Q 018503          120 VVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEG-----VRPSVLVSATALGYYGTSETEVFDESSPS--GN  192 (355)
Q Consensus       120 vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~-----~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~--~~  192 (355)
                      |||+|+...  .....++...+++|+.++.++++++.+  .+     +++|||+||.++  |+.....+++|+++.  ..
T Consensus        90 vih~A~~~~--~~~~~~~~~~~~~nv~g~~~l~~~~~~--~~~~~~~~~~iv~~SS~~~--~~~~~~~~~~E~~~~~~~~  163 (342)
T 2hrz_A           90 IFHLAAIVS--GEAELDFDKGYRINLDGTRYLFDAIRI--ANGKDGYKPRVVFTSSIAV--FGAPLPYPIPDEFHTTPLT  163 (342)
T ss_dssp             EEECCCCCH--HHHHHCHHHHHHHHTHHHHHHHHHHHH--HHHHHCCCCEEEEEEEGGG--CCSSCCSSBCTTCCCCCSS
T ss_pred             EEECCccCc--ccccccHHHHHHHHHHHHHHHHHHHHh--cccccCCCcEEEEeCchHh--hCCCCCCCcCCCCCCCCcc
Confidence            999999642  122345678899999999999999987  44     789999999988  986555678888774  34


Q ss_pred             hh-HHHHHHHHHHHHhccCCCCeEEEEEecEEEe-CCCC--cccchHHHH--HHHhCCCC---CCCCcceecccHHHHHH
Q 018503          193 DY-LAEVCREWEGTALKVNKDVRLALIRIGIVLG-KDGG--ALAKMIPLF--MMFAGGPL---GSGQQWFSWIHLDDIVN  263 (355)
Q Consensus       193 ~y-~~k~~~~~~~~~~~~~~~~~~~i~Rp~~i~G-~~~~--~~~~~~~~~--~~~~~~~~---~~~~~~~~~i~v~Dva~  263 (355)
                      .| .+|...|.....+....+++++++|++.+|| |+..  ....++..+  ....+.+.   ..++..++++|++|+|+
T Consensus       164 ~Y~~sK~~~e~~~~~~~~~~~~~~~~ir~~~v~g~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~Dva~  243 (342)
T 2hrz_A          164 SYGTQKAICELLLSDYSRRGFFDGIGIRLPTICIRPGKPNAAASGFFSNILREPLVGQEAVLPVPESIRHWHASPRSAVG  243 (342)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTSCEEEEEEECEETTCCSSCCCSGGGHHHHHHHHHHTTCCEEECSCTTCEEEEECHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHhcCCCceeEEeeeEEecCCCCcchhHHHHHHHHHHHhcCCCeeccCCCccceeeEehHHHHH
Confidence            67 7888888777777766789999999999998 5431  112233322  33445432   34466778999999999


Q ss_pred             HHHHHHhCCC----CCCceEecCCCccCHHHHHHHHHHHhCCCC--CC-CCcHHHHHHHhcccceeeecCccccchhHHh
Q 018503          264 LIYEALSNPS----YRGVINGTAPNPVRLAEMCDHLGNVLGRPS--WL-PVPEFALKAVLGEGAFVVLEGQRVVPARAKE  336 (355)
Q Consensus       264 ~~~~~~~~~~----~~~~~~i~~~~~~s~~el~~~i~~~~g~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~  336 (355)
                      +++.++..+.    .+++||++ ++++|+.|+++.+.+.+|.+.  .+ ..|..........      ....++++|+++
T Consensus       244 ~~~~~~~~~~~~~~~~~~~ni~-g~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~------~~~~~d~~k~~~  316 (342)
T 2hrz_A          244 FLIHGAMIDVEKVGPRRNLSMP-GLSATVGEQIEALRKVAGEKAVALIRREPNEMIMRMCEG------WAPGFEAKRARE  316 (342)
T ss_dssp             HHHHHHHSCHHHHCSCCEEECC-CEEEEHHHHHHHHHHHHCHHHHTTEEECCCHHHHHHHTT------SCCCBCCHHHHH
T ss_pred             HHHHHHhccccccCCccEEEcC-CCCCCHHHHHHHHHHHcCcccccceeeccCcchhhhhcc------cccccChHHHHH
Confidence            9999998763    35699995 577999999999999999752  12 1222211111111      123578888977


Q ss_pred             CCCCCCccCHHHHHHHHhC
Q 018503          337 LGFPFKYRYVKDALKAIMS  355 (355)
Q Consensus       337 lG~~p~~~~~~~~l~~~~~  355 (355)
                      |||+|+++ ++++|+++++
T Consensus       317 lG~~p~~~-l~e~l~~~~~  334 (342)
T 2hrz_A          317 LGFTAESS-FEEIIQVHIE  334 (342)
T ss_dssp             TTCCCCSS-HHHHHHHHHH
T ss_pred             cCCCCCCC-HHHHHHHHHH
Confidence            99999985 9999999863

>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*

Probab=100.00  E-value=1.3e-35  Score=269.30  Aligned_cols=289  Identities=17%  Similarity=0.096  Sum_probs=209.5

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhCC-----CeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcCC---CcEEEE
Q 018503           51 MTVSVTGATGFIGRRLVQRLQADN-----HQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQG---STAVVN  122 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~g-----~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~---~d~vi~  122 (355)
                      |+|||||||||||++|+++|+++|     ++|++++|+...........   ....+|+.|.+++.+++++   +|+|||
T Consensus         2 ~~vlVtGatG~iG~~l~~~L~~~g~~~~~~~V~~~~r~~~~~~~~~~~~---~~~~~Dl~d~~~~~~~~~~~~~~d~vih   78 (364)
T 2v6g_A            2 SVALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAWHEDNPI---NYVQCDISDPDDSQAKLSPLTDVTHVFY   78 (364)
T ss_dssp             EEEEEETTTSHHHHHHHHHTTSTTCTTCSEEEEEEESSCCCSCCCSSCC---EEEECCTTSHHHHHHHHTTCTTCCEEEE
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCCCCceEEEEEeCCCCccccccCce---EEEEeecCCHHHHHHHHhcCCCCCEEEE
Confidence            689999999999999999999999     99999999876543100010   1334688899999999987   999999


Q ss_pred             CCCCCCCCCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEE-------EEeeeeeeeeCCC--CCccccCCCCCC--
Q 018503          123 LAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSV-------LVSATALGYYGTS--ETEVFDESSPSG--  191 (355)
Q Consensus       123 ~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v-------~~Ss~~~~~yg~~--~~~~~~e~~~~~--  191 (355)
                      +|+...      .++...+++|+.++.+++++|.+...+++++|       |+||.++  ||..  ...+++|+++..  
T Consensus        79 ~a~~~~------~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~~g~~i~~Ss~~v--yg~~~~~~~~~~E~~~~~~~  150 (364)
T 2v6g_A           79 VTWANR------STEQENCEANSKMFRNVLDAVIPNCPNLKHISLQTGRKHYMGPFES--YGKIESHDPPYTEDLPRLKY  150 (364)
T ss_dssp             CCCCCC------SSHHHHHHHHHHHHHHHHHHHTTTCTTCCEEEEECCTHHHHCCGGG--TTTSCCCCSSBCTTSCCCSS
T ss_pred             CCCCCc------chHHHHHHHhHHHHHHHHHHHHHhccccceEEeccCceEEEechhh--ccccccCCCCCCccccCCcc
Confidence            999641      34567889999999999999998212788997       7999988  9864  345778876543  


Q ss_pred             -ChhHHHHHHHHHHHHhccCCC-CeEEEEEecEEEeCCCCcc-cchHHH--HHH---HhCCCC---CCC---Ccceeccc
Q 018503          192 -NDYLAEVCREWEGTALKVNKD-VRLALIRIGIVLGKDGGAL-AKMIPL--FMM---FAGGPL---GSG---QQWFSWIH  257 (355)
Q Consensus       192 -~~y~~k~~~~~~~~~~~~~~~-~~~~i~Rp~~i~G~~~~~~-~~~~~~--~~~---~~~~~~---~~~---~~~~~~i~  257 (355)
                       ..|+   ..|.....+....+ ++++++||+.+||++.... ..+.+.  ...   ..+.++   +++   ....+++|
T Consensus       151 ~~~y~---~~E~~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~  227 (364)
T 2v6g_A          151 MNFYY---DLEDIMLEEVEKKEGLTWSVHRPGNIFGFSPYSMMNLVGTLCVYAAICKHEGKVLRFTGCKAAWDGYSDCSD  227 (364)
T ss_dssp             CCHHH---HHHHHHHHHHTTSTTCEEEEEEESSEECCCTTCSSCHHHHHHHHHHHHHHHTCCBCCCSCHHHHHSCBCCEE
T ss_pred             chhhH---HHHHHHHHHhhcCCCceEEEECCCceeCCCCCcccchHHHHHHHHHHHHhcCCceecCCCcccccccCCCCc
Confidence             3452   24555555555556 9999999999999976432 222222  222   245543   444   23478889


Q ss_pred             HHHHHHHHHHHHhCCC-CCCceEecCCCccCHHHHHHHHHHHhCCC-CCC--CCcHHHHHHH-------------hcccc
Q 018503          258 LDDIVNLIYEALSNPS-YRGVINGTAPNPVRLAEMCDHLGNVLGRP-SWL--PVPEFALKAV-------------LGEGA  320 (355)
Q Consensus       258 v~Dva~~~~~~~~~~~-~~~~~~i~~~~~~s~~el~~~i~~~~g~~-~~~--~~~~~~~~~~-------------~~~~~  320 (355)
                      ++|+|++++.+++++. .+++||+++++++|+.|+++.+++.+|.+ ..+  ++|.+.....             .+...
T Consensus       228 v~Dva~a~~~~~~~~~~~g~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~  307 (364)
T 2v6g_A          228 ADLIAEHHIWAAVDPYAKNEAFNVSNGDVFKWKHFWKVLAEQFGVECGEYEEGVDLKLQDLMKGKEPVWEEIVRENGLTP  307 (364)
T ss_dssp             HHHHHHHHHHHHHCGGGTTEEEEECCSCCBCHHHHHHHHHHHHTCCBCCCCTTCCCCHHHHTTTCHHHHHHHHHHTTCCC
T ss_pred             HHHHHHHHHHHHhCCCCCCceEEecCCCcCCHHHHHHHHHHHhCCCCCCCCCCCCccHHHHHhhhHHHHHHHHHHhCCCc
Confidence            9999999999999865 45599999999999999999999999987 333  4554322111             11000


Q ss_pred             e---ee----------ecC-ccccchhHHhCCCCCCccCHHHHHHHHh
Q 018503          321 F---VV----------LEG-QRVVPARAKELGFPFKYRYVKDALKAIM  354 (355)
Q Consensus       321 ~---~~----------~~~-~~~~~~k~~~lG~~p~~~~~~~~l~~~~  354 (355)
                      .   ..          ..+ ..++++|++++||+|.++ ++++|++++
T Consensus       308 ~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~lG~~p~~~-~~e~l~~~~  354 (364)
T 2v6g_A          308 TKLKDVGIWWFGDVILGNECFLDSMNKSKEHGFLGFRN-SKNAFISWI  354 (364)
T ss_dssp             CCHHHHCCHHHHHHHHTSCCCCBCCHHHHHTTCCCCCC-HHHHHHHHH
T ss_pred             cccccccccchhhhccccchhhcchHHHHhcCCCCCCC-HHHHHHHHH
Confidence            0   00          033 478889998899999886 999999886

>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2

Probab=100.00  E-value=3.8e-36  Score=273.60  Aligned_cols=299  Identities=16%  Similarity=0.145  Sum_probs=213.9

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchh--hccCCC-------CCCccCCCeeecCCcchhhhcCC--Cc
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKA--ELIFPG-------KKTRFFPGVMIAEEPQWRDCIQG--ST  118 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~--~~~~~~-------~~~~~~~~~d~~~~~~~~~~~~~--~d  118 (355)
                      +|+||||||+||||++++++|+++|++|++++|+.+..  ..+...       ........+|+.|.+++.+++++  +|
T Consensus         1 m~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d   80 (372)
T 1db3_A            1 SKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREVQPD   80 (372)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHHCCS
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccchHHHHHHhhccccCCCceEEEECCCCCHHHHHHHHHhcCCC
Confidence            37899999999999999999999999999999986542  111100       00011345688898899888874  79


Q ss_pred             EEEECCCCCCCCCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCC---CcEEEEeeeeeeeeCCCCCccccCCCCC--CCh
Q 018503          119 AVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGV---RPSVLVSATALGYYGTSETEVFDESSPS--GND  193 (355)
Q Consensus       119 ~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~---~~~v~~Ss~~~~~yg~~~~~~~~e~~~~--~~~  193 (355)
                      +|||+|+.... .....++...+++|+.++.++++++.+  .++   ++||++||.++  ||.....+++|+.+.  ...
T Consensus        81 ~vih~A~~~~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~--~~~~~~~~iv~~SS~~v--~g~~~~~~~~E~~~~~~~~~  155 (372)
T 1db3_A           81 EVYNLGAMSHV-AVSFESPEYTADVDAMGTLRLLEAIRF--LGLEKKTRFYQASTSEL--YGLVQEIPQKETTPFYPRSP  155 (372)
T ss_dssp             EEEECCCCCTT-TTTTSCHHHHHHHHTHHHHHHHHHHHH--TTCTTTCEEEEEEEGGG--GTTCCSSSBCTTSCCCCCSH
T ss_pred             EEEECCcccCc-cccccCHHHHHHHHHHHHHHHHHHHHH--hCCCCCcEEEEeCChhh--hCCCCCCCCCccCCCCCCCh
Confidence            99999997432 223445677889999999999999998  566   79999999998  987666678887764  456


Q ss_pred             h-HHHHHHHHHHHHhccCCCCeEEEEEecEEEeCCCCc--ccchHH-HH-HHHhCCC----CCCCCcceecccHHHHHHH
Q 018503          194 Y-LAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGA--LAKMIP-LF-MMFAGGP----LGSGQQWFSWIHLDDIVNL  264 (355)
Q Consensus       194 y-~~k~~~~~~~~~~~~~~~~~~~i~Rp~~i~G~~~~~--~~~~~~-~~-~~~~~~~----~~~~~~~~~~i~v~Dva~~  264 (355)
                      | .+|...|.....+..+.+++++++|++++|||+.+.  ....+. .+ ....+..    ++++++.++++|++|+|++
T Consensus       156 Y~~sK~~~e~~~~~~~~~~~~~~~~~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~i~v~Dva~a  235 (372)
T 1db3_A          156 YAVAKLYAYWITVNYRESYGMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYVKM  235 (372)
T ss_dssp             HHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCCCEEESCTTCEECCEEHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhCCCeEEEEECCccCCCCCCcchhhHHHHHHHHHHcCCCCceeecCCCceeeeeEHHHHHHH
Confidence            7 788888877777766678999999999999997532  112222 22 2334432    2678899999999999999


Q ss_pred             HHHHHhCCCCCCceEecCCCccCHHHHHHHHHHHhCCCCCCC---CcHH-HHH---------HHhc------cc---cee
Q 018503          265 IYEALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLP---VPEF-ALK---------AVLG------EG---AFV  322 (355)
Q Consensus       265 ~~~~~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~---~~~~-~~~---------~~~~------~~---~~~  322 (355)
                      ++.+++++. +++||+++++++|+.|+++.+.+.+|.+..+.   .|.+ ...         ...+      .+   ...
T Consensus       236 ~~~~~~~~~-~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  314 (372)
T 1db3_A          236 QWMMLQQEQ-PEDFVIATGVQYSVRQFVEMAAAQLGIKLRFEGTGVEEKGIVVSVTGHDAPGVKPGDVIIAVDPRYFRPA  314 (372)
T ss_dssp             HHHTTSSSS-CCCEEECCCCCEEHHHHHHHHHHTTTEEEEEESCGGGCEEEEEEECSSSCTTCCTTCEEEEECGGGCCCC
T ss_pred             HHHHHhcCC-CceEEEcCCCceeHHHHHHHHHHHhCCCcccccccccccccccccccccccccccccceeeccccccCCC
Confidence            999998765 58999999999999999999999999752211   1111 000         0000      00   000


Q ss_pred             eecCccccchhHHh-CCCCCCccCHHHHHHHHhC
Q 018503          323 VLEGQRVVPARAKE-LGFPFKYRYVKDALKAIMS  355 (355)
Q Consensus       323 ~~~~~~~~~~k~~~-lG~~p~~~~~~~~l~~~~~  355 (355)
                      ......++++|+++ |||+|+++ ++|+|+++++
T Consensus       315 ~~~~~~~d~~k~~~~lG~~p~~~-l~e~l~~~~~  347 (372)
T 1db3_A          315 EVETLLGDPTKAHEKLGWKPEIT-LREMVSEMVA  347 (372)
T ss_dssp             C-CCCCBCCHHHHHHHCCCCCSC-HHHHHHHHHH
T ss_pred             chhhhccCHHHHHHHhCCccccC-HHHHHHHHHH
Confidence            11234568889965 99999996 9999999863

>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*

Probab=100.00  E-value=4.4e-36  Score=273.98  Aligned_cols=289  Identities=16%  Similarity=0.149  Sum_probs=212.9

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchh-----hccCCCC----C-CccCCCeeecCCcchhhhcCC--Cc
Q 018503           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKA-----ELIFPGK----K-TRFFPGVMIAEEPQWRDCIQG--ST  118 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-----~~~~~~~----~-~~~~~~~d~~~~~~~~~~~~~--~d  118 (355)
                      |+||||||+||||++|++.|++.|++|++++|+....     ..+....    . ......+|+.|.+++.+++++  +|
T Consensus        29 k~vlVtGatG~IG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d  108 (381)
T 1n7h_A           29 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVIKPD  108 (381)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHHCCS
T ss_pred             CeEEEEcCCchHHHHHHHHHHHCCCEEEEEecCCccccchhhhhhhhccccccccceEEEECCCCCHHHHHHHHHhcCCC
Confidence            6899999999999999999999999999999987541     1111000    0 001234688888888888874  69


Q ss_pred             EEEECCCCCCCCCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCC-----cEEEEeeeeeeeeCCCCCccccCCCCC--C
Q 018503          119 AVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVR-----PSVLVSATALGYYGTSETEVFDESSPS--G  191 (355)
Q Consensus       119 ~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~-----~~v~~Ss~~~~~yg~~~~~~~~e~~~~--~  191 (355)
                      +|||+|+.... .....++...+++|+.++.++++++.+  .+++     +|||+||.++  ||...+ +++|+++.  .
T Consensus       109 ~Vih~A~~~~~-~~~~~~~~~~~~~nv~~~~~l~~a~~~--~~~~~~~~~~~v~~SS~~v--yg~~~~-~~~E~~~~~~~  182 (381)
T 1n7h_A          109 EVYNLAAQSHV-AVSFEIPDYTADVVATGALRLLEAVRS--HTIDSGRTVKYYQAGSSEM--FGSTPP-PQSETTPFHPR  182 (381)
T ss_dssp             EEEECCSCCCH-HHHHHSHHHHHHHHTHHHHHHHHHHHH--HHHHHCCCCEEEEEEEGGG--GTTSCS-SBCTTSCCCCC
T ss_pred             EEEECCcccCc-cccccCHHHHHHHHHHHHHHHHHHHHH--hCCccCCccEEEEeCcHHH--hCCCCC-CCCCCCCCCCC
Confidence            99999996421 112345678889999999999999988  4544     9999999998  987665 78887664  4


Q ss_pred             Chh-HHHHHHHHHHHHhccCCCCeEEEEEecEEEeCCCCc--ccchHH-HH-HHHhCCC----CCCCCcceecccHHHHH
Q 018503          192 NDY-LAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGA--LAKMIP-LF-MMFAGGP----LGSGQQWFSWIHLDDIV  262 (355)
Q Consensus       192 ~~y-~~k~~~~~~~~~~~~~~~~~~~i~Rp~~i~G~~~~~--~~~~~~-~~-~~~~~~~----~~~~~~~~~~i~v~Dva  262 (355)
                      ..| .+|...|.....+..+.+++++++|++++|||+...  ...++. .+ ....+..    ++.++..++++|++|+|
T Consensus       183 ~~Y~~sK~~~E~~~~~~~~~~~~~~~~~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~v~v~Dva  262 (381)
T 1n7h_A          183 SPYAASKCAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLGNLQASRDWGFAGDYV  262 (381)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCCCEEESCTTCEEECEEHHHHH
T ss_pred             CchHHHHHHHHHHHHHHHHHhCCcEEEEEeCceeCCCCCCcchhHHHHHHHHHHHcCCCCeEEeCCCCceeeeEEHHHHH
Confidence            567 788888877777766668999999999999997532  111222 12 2334432    26778899999999999


Q ss_pred             HHHHHHHhCCCCCCceEecCCCccCHHHHHHHHHHHhCCCCC--CCCcHHHHHHHhcccceeeecCccccchhHHh-CCC
Q 018503          263 NLIYEALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSW--LPVPEFALKAVLGEGAFVVLEGQRVVPARAKE-LGF  339 (355)
Q Consensus       263 ~~~~~~~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~-lG~  339 (355)
                      ++++.+++.+. .++||+++++++|+.|+++.+.+.+|.+..  +.+....    ...   .......++++|+++ |||
T Consensus       263 ~a~~~~~~~~~-~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~----~~~---~~~~~~~~d~~k~~~~lG~  334 (381)
T 1n7h_A          263 EAMWLMLQQEK-PDDYVVATEEGHTVEEFLDVSFGYLGLNWKDYVEIDQRY----FRP---AEVDNLQGDASKAKEVLGW  334 (381)
T ss_dssp             HHHHHHHTSSS-CCEEEECCSCEEEHHHHHHHHHHHTTCCGGGTEEECGGG----SCS---SCCCBCCBCCHHHHHHHCC
T ss_pred             HHHHHHHhCCC-CCeEEeeCCCCCcHHHHHHHHHHHcCCCcccccccCccc----CCc---cccccccCCHHHHHHhcCC
Confidence            99999998765 589999999999999999999999997521  1111100    000   011234567888865 999


Q ss_pred             CCCccCHHHHHHHHh
Q 018503          340 PFKYRYVKDALKAIM  354 (355)
Q Consensus       340 ~p~~~~~~~~l~~~~  354 (355)
                      +|+++ ++++|++++
T Consensus       335 ~p~~~-l~e~l~~~~  348 (381)
T 1n7h_A          335 KPQVG-FEKLVKMMV  348 (381)
T ss_dssp             CCCSC-HHHHHHHHH
T ss_pred             cccCC-HHHHHHHHH
Confidence            99985 999999886

>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A*

Probab=100.00  E-value=2.2e-35  Score=262.65  Aligned_cols=281  Identities=13%  Similarity=0.183  Sum_probs=208.1

Q ss_pred             EEEEEcCCchHHHHHHHHHHhC--CCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcC--CCcEEEECCCCC
Q 018503           52 TVSVTGATGFIGRRLVQRLQAD--NHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ--GSTAVVNLAGTP  127 (355)
Q Consensus        52 ~IlVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--~~d~vi~~a~~~  127 (355)
                      +||||||+||||++|+++|++.  |++|++++|+.....    ..   ....+|+.|.+++.++++  ++|+|||+|+..
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~----~~---~~~~~D~~d~~~~~~~~~~~~~d~vih~a~~~   73 (317)
T 3ajr_A            1 MILVTGSSGQIGTELVPYLAEKYGKKNVIASDIVQRDTG----GI---KFITLDVSNRDEIDRAVEKYSIDAIFHLAGIL   73 (317)
T ss_dssp             CEEEESTTSTTHHHHHHHHHHHHCGGGEEEEESSCCCCT----TC---CEEECCTTCHHHHHHHHHHTTCCEEEECCCCC
T ss_pred             CEEEEcCCcHHHHHHHHHHHHhcCCCEEEEecCCCcccc----Cc---eEEEecCCCHHHHHHHHhhcCCcEEEECCccc
Confidence            5999999999999999999998  899999999765432    11   144578999999999887  899999999864


Q ss_pred             CCCCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCCC-CccccCCCCC--CChh-HHHHHHHHH
Q 018503          128 IGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSE-TEVFDESSPS--GNDY-LAEVCREWE  203 (355)
Q Consensus       128 ~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~-~~~~~e~~~~--~~~y-~~k~~~~~~  203 (355)
                      ..  ....++...+++|+.++.++++++++  .++++|||+||.++  |+... ..+.+|+.+.  ...| .+|...|..
T Consensus        74 ~~--~~~~~~~~~~~~n~~~~~~l~~a~~~--~~~~~~v~~SS~~~--~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~  147 (317)
T 3ajr_A           74 SA--KGEKDPALAYKVNMNGTYNILEAAKQ--HRVEKVVIPSTIGV--FGPETPKNKVPSITITRPRTMFGVTKIAAELL  147 (317)
T ss_dssp             HH--HHHHCHHHHHHHHHHHHHHHHHHHHH--TTCCEEEEEEEGGG--CCTTSCSSSBCSSSCCCCCSHHHHHHHHHHHH
T ss_pred             CC--ccccChHHHhhhhhHHHHHHHHHHHH--cCCCEEEEecCHHH--hCCCCCCCCccccccCCCCchHHHHHHHHHHH
Confidence            21  12345678899999999999999998  68899999999998  88542 3455665553  4567 788888877


Q ss_pred             HHHhccCCCCeEEEEEecEEEeCCCCc----ccchHHHH-HHHhCCC---CCCCCcceecccHHHHHHHHHHHHhCCCC-
Q 018503          204 GTALKVNKDVRLALIRIGIVLGKDGGA----LAKMIPLF-MMFAGGP---LGSGQQWFSWIHLDDIVNLIYEALSNPSY-  274 (355)
Q Consensus       204 ~~~~~~~~~~~~~i~Rp~~i~G~~~~~----~~~~~~~~-~~~~~~~---~~~~~~~~~~i~v~Dva~~~~~~~~~~~~-  274 (355)
                      ...+..+.+++++++||+++||+...+    ...+...+ ....+..   ++.++..++++|++|+|++++.++.++.. 
T Consensus       148 ~~~~~~~~~~~~~~lR~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~~~~~  227 (317)
T 3ajr_A          148 GQYYYEKFGLDVRSLRYPGIISYKAEPTAGTTDYAVEIFYYAVKREKYKCYLAPNRALPMMYMPDALKALVDLYEADRDK  227 (317)
T ss_dssp             HHHHHHHHCCEEEEEEECEEECSSSCCCSCSSTHHHHHHHHHHTTCCEEECSCTTCCEEEEEHHHHHHHHHHHHHCCGGG
T ss_pred             HHHHHHhcCCeEEEEecCcEeccCCCCCCcchhHHHHHHHHHHhCCCceeecCccceeeeeEHHHHHHHHHHHHhCCccc
Confidence            776666669999999999999975321    11123322 3333333   25677889999999999999999987642 


Q ss_pred             ---CCceEecCCCccCHHHHHHHHHHHhCCCCCCCCcHHHHHHHhcccceeeecCccccchhHH-hCCCCCCccCHHHHH
Q 018503          275 ---RGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAK-ELGFPFKYRYVKDAL  350 (355)
Q Consensus       275 ---~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~-~lG~~p~~~~~~~~l  350 (355)
                         +++||+++ ..+|+.|+++.+.+.+|... ++.... .......     .....++++|++ .+||+|+++ ++++|
T Consensus       228 ~~~g~~~~i~~-~~~s~~e~~~~i~~~~~~~~-i~~~~~-~~~~~~~-----~~~~~~d~~k~~~~lG~~p~~~-~~~~l  298 (317)
T 3ajr_A          228 LVLRNGYNVTA-YTFTPSELYSKIKERIPEFE-IEYKED-FRDKIAA-----TWPESLDSSEASNEWGFSIEYD-LDRTI  298 (317)
T ss_dssp             CSSCSCEECCS-EEECHHHHHHHHHTTCCSCC-EEECCC-HHHHHHT-----TSCSCBCCHHHHHHHCCCCCCC-HHHHH
T ss_pred             cccCceEecCC-ccccHHHHHHHHHHHCCccc-cccccc-cchhhcc-----ccccccCHHHHHHHcCCCCCCC-HHHHH
Confidence               47999986 57999999999999998422 211111 1110111     012456788886 499999996 99999


Q ss_pred             HHHh
Q 018503          351 KAIM  354 (355)
Q Consensus       351 ~~~~  354 (355)
                      ++++
T Consensus       299 ~~~~  302 (317)
T 3ajr_A          299 DDMI  302 (317)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            9886

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A

Probab=100.00  E-value=1e-34  Score=261.02  Aligned_cols=292  Identities=17%  Similarity=0.091  Sum_probs=206.2

Q ss_pred             CcccCCCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCC-----CCCccCC-CeeecCCcchhhhcCCC
Q 018503           44 HTQKASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-----KKTRFFP-GVMIAEEPQWRDCIQGS  117 (355)
Q Consensus        44 ~~~~~~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-----~~~~~~~-~~d~~~~~~~~~~~~~~  117 (355)
                      ++..+++|+||||||+||||++|+++|+++|++|++++|+.+....+...     ....... .+|+.|.+.+.++++++
T Consensus         5 ~~~~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~   84 (342)
T 1y1p_A            5 NAVLPEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIKGA   84 (342)
T ss_dssp             TCSSCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTTTC
T ss_pred             cccCCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCcccHHHHHHHhhccCCCceEEEEecCCcChHHHHHHHcCC
Confidence            34445668999999999999999999999999999999986553321100     0000123 47899999999999999


Q ss_pred             cEEEECCCCCCCCCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCCC----CccccCCCC----
Q 018503          118 TAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSE----TEVFDESSP----  189 (355)
Q Consensus       118 d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~----~~~~~e~~~----  189 (355)
                      |+|||+|+....    ..++...+++|+.++.++++++... .++++|||+||.++  |+...    +.+++|+++    
T Consensus        85 d~vih~A~~~~~----~~~~~~~~~~n~~g~~~ll~~~~~~-~~~~~iv~~SS~~~--~~~~~~~~~~~~~~E~~~~~~~  157 (342)
T 1y1p_A           85 AGVAHIASVVSF----SNKYDEVVTPAIGGTLNALRAAAAT-PSVKRFVLTSSTVS--ALIPKPNVEGIYLDEKSWNLES  157 (342)
T ss_dssp             SEEEECCCCCSC----CSCHHHHHHHHHHHHHHHHHHHHTC-TTCCEEEEECCGGG--TCCCCTTCCCCEECTTCCCHHH
T ss_pred             CEEEEeCCCCCC----CCCHHHHHHHHHHHHHHHHHHHHhC-CCCcEEEEeccHHH--hcCCCCCCCCcccCccccCchh
Confidence            999999997432    1345678999999999999999841 47889999999988  75322    256777762    


Q ss_pred             --------------CCChh-HHHHHHHHHHHHhccC--CCCeEEEEEecEEEeCCCCccc--chHHHH--HHHhCCCC--
Q 018503          190 --------------SGNDY-LAEVCREWEGTALKVN--KDVRLALIRIGIVLGKDGGALA--KMIPLF--MMFAGGPL--  246 (355)
Q Consensus       190 --------------~~~~y-~~k~~~~~~~~~~~~~--~~~~~~i~Rp~~i~G~~~~~~~--~~~~~~--~~~~~~~~--  246 (355)
                                    +...| .+|...|.....+..+  .+++++++||+++||+......  .....+  ....+.+.  
T Consensus       158 ~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (342)
T 1y1p_A          158 IDKAKTLPESDPQKSLWVYAASKTEAELAAWKFMDENKPHFTLNAVLPNYTIGTIFDPETQSGSTSGWMMSLFNGEVSPA  237 (342)
T ss_dssp             HHHHHHSCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHCCSSEEEEEEESEEECCCSCTTTCCCHHHHHHHHHHTTCCCHH
T ss_pred             hhhhccccccccccchHHHHHHHHHHHHHHHHHHHhcCCCceEEEEcCCceECCCCCCCCCCccHHHHHHHHHcCCCccc
Confidence                          12357 7787777776665543  2789999999999999753321  122222  33445543  


Q ss_pred             -CCCCcceecccHHHHHHHHHHHHhCCCCCCceEecCCCccCHHHHHHHHHHHhCCCCCCCCcHHHHHHHhcccceeeec
Q 018503          247 -GSGQQWFSWIHLDDIVNLIYEALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLE  325 (355)
Q Consensus       247 -~~~~~~~~~i~v~Dva~~~~~~~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~  325 (355)
                       +.+ ..++++|++|+|++++.++..+...|.+++++++++|+.|+++.+.+.+|.+. ++.+.      ...    ...
T Consensus       238 ~~~~-~~~~~v~v~Dva~a~~~~~~~~~~~g~~~~~~g~~~s~~e~~~~i~~~~~~~~-~~~~~------~~~----~~~  305 (342)
T 1y1p_A          238 LALM-PPQYYVSAVDIGLLHLGCLVLPQIERRRVYGTAGTFDWNTVLATFRKLYPSKT-FPADF------PDQ----GQD  305 (342)
T ss_dssp             HHTC-CSEEEEEHHHHHHHHHHHHHCTTCCSCEEEECCEEECHHHHHHHHHHHCTTSC-CCCCC------CCC----CCC
T ss_pred             cccC-CcCCEeEHHHHHHHHHHHHcCcccCCceEEEeCCCCCHHHHHHHHHHHCCCcc-CCCCC------Ccc----ccc
Confidence             233 67899999999999999998765445444566778999999999999998751 22211      000    012


Q ss_pred             CccccchhHHh-CCC---CCCccCHHHHHHHHhC
Q 018503          326 GQRVVPARAKE-LGF---PFKYRYVKDALKAIMS  355 (355)
Q Consensus       326 ~~~~~~~k~~~-lG~---~p~~~~~~~~l~~~~~  355 (355)
                      ...++++|+++ |||   .+.. +++++|+++++
T Consensus       306 ~~~~d~~k~~~~lg~~~~~~~~-~l~~~l~~~~~  338 (342)
T 1y1p_A          306 LSKFDTAPSLEILKSLGRPGWR-SIEESIKDLVG  338 (342)
T ss_dssp             CCEECCHHHHHHHHHTTCCSCC-CHHHHHHHHHC
T ss_pred             cccCChHHHHHHHhhcccCCcC-CHHHHHHHHHH
Confidence            34567788754 776   4445 59999999874

>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1

Probab=100.00  E-value=1.5e-35  Score=288.18  Aligned_cols=298  Identities=17%  Similarity=0.229  Sum_probs=218.5

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHhC-CCeEEEEecCCchhhccCCCCCCccCCCeeecCCcc-hhhhcCCCcEEEECCC
Q 018503           48 ASQMTVSVTGATGFIGRRLVQRLQAD-NHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQ-WRDCIQGSTAVVNLAG  125 (355)
Q Consensus        48 ~~~~~IlVtGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~-~~~~~~~~d~vi~~a~  125 (355)
                      .++|+|||||||||||++|+++|++. |++|++++|+......+..... .....+|+.|.++ +.++++++|+|||+|+
T Consensus       313 ~~~~~VLVTGatG~IG~~l~~~Ll~~~g~~V~~~~r~~~~~~~~~~~~~-v~~v~~Dl~d~~~~~~~~~~~~D~Vih~Aa  391 (660)
T 1z7e_A          313 RRRTRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPH-FHFVEGDISIHSEWIEYHVKKCDVVLPLVA  391 (660)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHHHSSSEEEEEEESCCTTTGGGTTCTT-EEEEECCTTTCHHHHHHHHHHCSEEEECCC
T ss_pred             ccCceEEEEcCCcHHHHHHHHHHHhcCCCEEEEEEcCchhhhhhccCCc-eEEEECCCCCcHHHHHHhhcCCCEEEECce
Confidence            34579999999999999999999998 8999999998765443322111 0123467877765 7778889999999999


Q ss_pred             CCCCCCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCCCCccccCCCCC---------CChh-H
Q 018503          126 TPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPS---------GNDY-L  195 (355)
Q Consensus       126 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~---------~~~y-~  195 (355)
                      ..... ....++...+++|+.++.++++++.+  .+ ++|||+||.++  ||.....+++|+++.         ...| .
T Consensus       392 ~~~~~-~~~~~~~~~~~~Nv~gt~~ll~aa~~--~~-~r~V~~SS~~v--yg~~~~~~~~E~~~~~~~~p~~~p~~~Y~~  465 (660)
T 1z7e_A          392 IATPI-EYTRNPLRVFELDFEENLRIIRYCVK--YR-KRIIFPSTSEV--YGMCSDKYFDEDHSNLIVGPVNKPRWIYSV  465 (660)
T ss_dssp             CCCTH-HHHHSHHHHHHHHTHHHHHHHHHHHH--TT-CEEEEECCGGG--GBTCCSSSBCTTTCCEEECCTTCTTHHHHH
T ss_pred             ecCcc-ccccCHHHHHHhhhHHHHHHHHHHHH--hC-CEEEEEecHHH--cCCCCCcccCCCccccccCcccCCCCCcHH
Confidence            74321 12345678889999999999999998  56 89999999998  987666677777642         2257 7


Q ss_pred             HHHHHHHHHHHhccCCCCeEEEEEecEEEeCCCCcc-------cchHHHH--HHHhCCCC---CCCCcceecccHHHHHH
Q 018503          196 AEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGAL-------AKMIPLF--MMFAGGPL---GSGQQWFSWIHLDDIVN  263 (355)
Q Consensus       196 ~k~~~~~~~~~~~~~~~~~~~i~Rp~~i~G~~~~~~-------~~~~~~~--~~~~~~~~---~~~~~~~~~i~v~Dva~  263 (355)
                      +|...|.....+..+.+++++++||+++||+.....       ..+++.+  ....+.++   +++++.++|+|++|+|+
T Consensus       466 sK~~~E~~~~~~~~~~gi~~~ilRpg~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~v~Dva~  545 (660)
T 1z7e_A          466 SKQLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIE  545 (660)
T ss_dssp             HHHHHHHHHHHHHHHHCCCEEEEEECSEESTTSSCHHHHTTTCSCHHHHHHHHHHHTCCEEEEGGGCCEEECEEHHHHHH
T ss_pred             HHHHHHHHHHHHHHHcCCCEEEECCCcccCCCccccccccccccchHHHHHHHHHcCCCcEEeCCCCeEEEEEEHHHHHH
Confidence            788777777666555699999999999999975321       1223322  34456554   56788999999999999


Q ss_pred             HHHHHHhCCC---CCCceEecCCC-ccCHHHHHHHHHHHhCCCC-CCCCcHHH------HHHHhcccceeeecCccccch
Q 018503          264 LIYEALSNPS---YRGVINGTAPN-PVRLAEMCDHLGNVLGRPS-WLPVPEFA------LKAVLGEGAFVVLEGQRVVPA  332 (355)
Q Consensus       264 ~~~~~~~~~~---~~~~~~i~~~~-~~s~~el~~~i~~~~g~~~-~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~  332 (355)
                      +++.++..+.   .+++||+++++ ++|+.|+++.+.+.+|.+. .+.+|.+.      .....+... .......++++
T Consensus       546 ai~~~l~~~~~~~~g~~~ni~~~~~~~s~~el~~~i~~~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~d~~  624 (660)
T 1z7e_A          546 ALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLRHHFPPFAGFRVVESSSYYGKGY-QDVEHRKPSIR  624 (660)
T ss_dssp             HHHHHHHCGGGTTTTEEEEECCGGGEEEHHHHHHHHHHHHHHCTTGGGSCCCCCEEEECTHHHHCTTC-CCCSCCCBCCH
T ss_pred             HHHHHHhCccccCCCeEEEECCCCCCcCHHHHHHHHHHHhcCCCcccccCccccccchhccccccccc-cchhhcccCHH
Confidence            9999998764   35699999986 8999999999999998652 23333221      011111110 11234567888


Q ss_pred             hHHh-CCCCCCccCHHHHHHHHh
Q 018503          333 RAKE-LGFPFKYRYVKDALKAIM  354 (355)
Q Consensus       333 k~~~-lG~~p~~~~~~~~l~~~~  354 (355)
                      |+++ |||+|+++ ++++|++++
T Consensus       625 ka~~~LG~~p~~~-l~egl~~~i  646 (660)
T 1z7e_A          625 NAHRCLDWEPKID-MQETIDETL  646 (660)
T ss_dssp             HHHHHHCCCCCCC-HHHHHHHHH
T ss_pred             HHHHhcCCCccCc-HHHHHHHHH
Confidence            8965 99999996 999999986

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*

Probab=100.00  E-value=2.9e-35  Score=264.20  Aligned_cols=288  Identities=21%  Similarity=0.224  Sum_probs=198.4

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhh---ccCCCCC---CccCCCeeecCCcchhhhcCCCcEEEEC
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAE---LIFPGKK---TRFFPGVMIAEEPQWRDCIQGSTAVVNL  123 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~---~~~~~~~---~~~~~~~d~~~~~~~~~~~~~~d~vi~~  123 (355)
                      +|+||||||+||||++|+++|+++||+|++++|+.+...   .+.....   ......+|+.|.+++.++++++|+|||+
T Consensus         5 ~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~   84 (337)
T 2c29_D            5 SETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPTNVKKVKHLLDLPKAETHLTLWKADLADEGSFDEAIKGCTGVFHV   84 (337)
T ss_dssp             -CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCTTCHHHHHHHHTSTTHHHHEEEEECCTTSTTTTHHHHTTCSEEEEC
T ss_pred             CCEEEEECCchHHHHHHHHHHHHCCCEEEEEECCcchhHHHHHHHhcccCCCeEEEEEcCCCCHHHHHHHHcCCCEEEEe
Confidence            478999999999999999999999999999999875321   1100000   0013346889999999999999999999


Q ss_pred             CCCCCCCCCChhhHHHHHHHhhhhHHHHHHHHHcCCCC-CCcEEEEeeeeeeeeCCC-CCccccCCCC-----------C
Q 018503          124 AGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEG-VRPSVLVSATALGYYGTS-ETEVFDESSP-----------S  190 (355)
Q Consensus       124 a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~-~~~~v~~Ss~~~~~yg~~-~~~~~~e~~~-----------~  190 (355)
                      |+..  .....+.....+++|+.++.++++++.+  .+ +++|||+||.++. |+.. ...+++|+.+           +
T Consensus        85 A~~~--~~~~~~~~~~~~~~nv~gt~~ll~a~~~--~~~~~riV~~SS~~~~-~~~~~~~~~~~E~~~~~~~~~~~~~~~  159 (337)
T 2c29_D           85 ATPM--DFESKDPENEVIKPTIEGMLGIMKSCAA--AKTVRRLVFTSSAGTV-NIQEHQLPVYDESCWSDMEFCRAKKMT  159 (337)
T ss_dssp             CCCC--CSSCSSHHHHTHHHHHHHHHHHHHHHHH--HSCCCEEEEECCGGGT-SCSSSCCSEECTTCCCCHHHHHHHCCT
T ss_pred             cccc--CCCCCChHHHHHHHHHHHHHHHHHHHHh--CCCccEEEEeeeHhhc-ccCCCCCcccCcccCCchhhhcccCCc
Confidence            9864  1112223346889999999999999988  55 8899999998742 5432 2334666643           2


Q ss_pred             CChh-HHHHHHHHHHHHhccCCCCeEEEEEecEEEeCCCCc-ccchHHHH-HHHhCCCC--CCCCcceecccHHHHHHHH
Q 018503          191 GNDY-LAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGA-LAKMIPLF-MMFAGGPL--GSGQQWFSWIHLDDIVNLI  265 (355)
Q Consensus       191 ~~~y-~~k~~~~~~~~~~~~~~~~~~~i~Rp~~i~G~~~~~-~~~~~~~~-~~~~~~~~--~~~~~~~~~i~v~Dva~~~  265 (355)
                      ...| .+|...|.+...+...++++++++||+++|||.... ........ ....+...  +.. ....|+|++|+|+++
T Consensus       160 ~~~Y~~sK~~~E~~~~~~~~~~gi~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~i~v~Dva~a~  238 (337)
T 2c29_D          160 AWMYFVSKTLAEQAAWKYAKENNIDFITIIPTLVVGPFIMSSMPPSLITALSPITGNEAHYSII-RQGQFVHLDDLCNAH  238 (337)
T ss_dssp             THHHHHHHHHHHHHHHHHHHHHTCCEEEEEECEEESCCSCSSCCHHHHHHTHHHHTCGGGHHHH-TEEEEEEHHHHHHHH
T ss_pred             cchHHHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCCCCCCchHHHHHHHHcCCCcccccc-CCCCEEEHHHHHHHH
Confidence            2247 778877777666555569999999999999997532 11111111 11223221  111 124599999999999


Q ss_pred             HHHHhCCCCCCceEecCCCccCHHHHHHHHHHHhCCCCCCCCcHHHHHHHhcccceeeecCccccchhHHhCCCCCCccC
Q 018503          266 YEALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPFKYRY  345 (355)
Q Consensus       266 ~~~~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~lG~~p~~~~  345 (355)
                      +.+++.+...+.|++++ ..+|+.|+++.+.+.++..   ++|...     ... ........++++|+++|||+|+++ 
T Consensus       239 ~~~~~~~~~~~~~~~~~-~~~s~~e~~~~i~~~~~~~---~~~~~~-----~~~-~~~~~~~~~d~~k~~~lG~~p~~~-  307 (337)
T 2c29_D          239 IYLFENPKAEGRYICSS-HDCIILDLAKMLREKYPEY---NIPTEF-----KGV-DENLKSVCFSSKKLTDLGFEFKYS-  307 (337)
T ss_dssp             HHHHHCTTCCEEEEECC-EEEEHHHHHHHHHHHCTTS---CCCSCC-----TTC-CTTCCCCEECCHHHHHHTCCCCCC-
T ss_pred             HHHhcCcccCceEEEeC-CCCCHHHHHHHHHHHCCCc---cCCCCC-----Ccc-cCCCccccccHHHHHHcCCCcCCC-
Confidence            99998765567886655 5689999999999987431   111100     000 001234567788898899999997 


Q ss_pred             HHHHHHHHh
Q 018503          346 VKDALKAIM  354 (355)
Q Consensus       346 ~~~~l~~~~  354 (355)
                      ++++|++++
T Consensus       308 l~e~l~~~~  316 (337)
T 2c29_D          308 LEDMFTGAV  316 (337)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHHHH
Confidence            999999986

>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A

Probab=100.00  E-value=7.7e-36  Score=268.01  Aligned_cols=286  Identities=17%  Similarity=0.177  Sum_probs=194.7

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhc------cCCCCCCccCCCeeecCCcchhhhcCCCcEEEEC
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAEL------IFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNL  123 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~------~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~  123 (355)
                      +|+|||||||||||++|+++|+++||+|++++|+.+....      +..... ......|+.|.+.+.++++++|+|||+
T Consensus         9 ~~~vlVTGatGfIG~~l~~~Ll~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~Dl~d~~~~~~~~~~~D~Vih~   87 (338)
T 2rh8_A            9 KKTACVVGGTGFVASLLVKLLLQKGYAVNTTVRDPDNQKKVSHLLELQELGD-LKIFRADLTDELSFEAPIAGCDFVFHV   87 (338)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHTTCEEEEEESCTTCTTTTHHHHHHGGGSC-EEEEECCTTTSSSSHHHHTTCSEEEEE
T ss_pred             CCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCcchhhhHHHHHhcCCCCc-EEEEecCCCChHHHHHHHcCCCEEEEe
Confidence            5799999999999999999999999999999997653211      100000 013346888999999999999999999


Q ss_pred             CCCCCCCCCChhhH-HHHHHHhhhhHHHHHHHHHcCCCC-CCcEEEEeeeeeeeeCCC---CCccccCCCCC--------
Q 018503          124 AGTPIGTRWSSEIK-KEIKESRIRVTSKVVDLINESPEG-VRPSVLVSATALGYYGTS---ETEVFDESSPS--------  190 (355)
Q Consensus       124 a~~~~~~~~~~~~~-~~~~~~n~~~~~~l~~a~~~~~~~-~~~~v~~Ss~~~~~yg~~---~~~~~~e~~~~--------  190 (355)
                      |+..   .....++ ..++++|+.++.++++++.+  .+ +++|||+||.++. |+..   ...+++|+.+.        
T Consensus        88 A~~~---~~~~~~~~~~~~~~nv~gt~~ll~aa~~--~~~v~r~V~~SS~~~~-~~~~~~~~~~~~~E~~~~~~~~~~~~  161 (338)
T 2rh8_A           88 ATPV---HFASEDPENDMIKPAIQGVVNVMKACTR--AKSVKRVILTSSAAAV-TINQLDGTGLVVDEKNWTDIEFLTSA  161 (338)
T ss_dssp             SSCC---CC---------CHHHHHHHHHHHHHHHH--CTTCCEEEEECCHHHH-HHHHHTCSCCCCCTTTTTCC------
T ss_pred             CCcc---CCCCCCcHHHHHHHHHHHHHHHHHHHHH--cCCcCEEEEEecHHHe-ecCCcCCCCcccChhhccchhhcccc
Confidence            9864   1122222 34889999999999999998  54 8999999998742 3321   11256665421        


Q ss_pred             ---CChh-HHHHHHHHHHHHhccCCCCeEEEEEecEEEeCCCCc-ccchHHHH-HHHhCCCC--CC------CCcceecc
Q 018503          191 ---GNDY-LAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGA-LAKMIPLF-MMFAGGPL--GS------GQQWFSWI  256 (355)
Q Consensus       191 ---~~~y-~~k~~~~~~~~~~~~~~~~~~~i~Rp~~i~G~~~~~-~~~~~~~~-~~~~~~~~--~~------~~~~~~~i  256 (355)
                         ...| .+|...|.+...+....+++++++||+++||+.... .......+ ....+...  +.      ++..++|+
T Consensus       162 ~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i  241 (338)
T 2rh8_A          162 KPPTWGYPASKTLAEKAAWKFAEENNIDLITVIPTLMAGSSLTSDVPSSIGLAMSLITGNEFLINGMKGMQMLSGSVSIA  241 (338)
T ss_dssp             -CCCCCCTTSCCHHHHHHHHHHHHHTCCEEEEEECEEESCCSSSSCCHHHHHHHHHHHTCHHHHHHHHHHHHHHSSEEEE
T ss_pred             CCccchHHHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCCCCCCchHHHHHHHHcCCccccccccccccccCcccEE
Confidence               1147 778777777666555568999999999999997532 11111111 11222211  10      11234899


Q ss_pred             cHHHHHHHHHHHHhCCCCCCceEecCCCccCHHHHHHHHHHHhCCCCCCCCcHHHHHHHhcccceeeecCccccchhHHh
Q 018503          257 HLDDIVNLIYEALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKE  336 (355)
Q Consensus       257 ~v~Dva~~~~~~~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~  336 (355)
                      |++|+|++++.+++.+...+.|+++++ .+|+.|+++.+.+.++..   ++|... ....+.      ....++++|+++
T Consensus       242 ~v~Dva~a~~~~~~~~~~~~~~~~~~~-~~s~~e~~~~l~~~~~~~---~~~~~~-~~~~~~------~~~~~d~~k~~~  310 (338)
T 2rh8_A          242 HVEDVCRAHIFVAEKESASGRYICCAA-NTSVPELAKFLSKRYPQY---KVPTDF-GDFPPK------SKLIISSEKLVK  310 (338)
T ss_dssp             EHHHHHHHHHHHHHCTTCCEEEEECSE-EECHHHHHHHHHHHCTTS---CCCCCC-TTSCSS------CSCCCCCHHHHH
T ss_pred             EHHHHHHHHHHHHcCCCcCCcEEEecC-CCCHHHHHHHHHHhCCCC---CCCCCC-CCCCcC------cceeechHHHHH
Confidence            999999999999987666678987664 599999999999987631   111110 000010      125678889988


Q ss_pred             CCCCCCccCHHHHHHHHh
Q 018503          337 LGFPFKYRYVKDALKAIM  354 (355)
Q Consensus       337 lG~~p~~~~~~~~l~~~~  354 (355)
                      |||+|+++ ++|+|++++
T Consensus       311 lG~~p~~~-l~~gl~~~~  327 (338)
T 2rh8_A          311 EGFSFKYG-IEEIYDESV  327 (338)
T ss_dssp             HTCCCSCC-HHHHHHHHH
T ss_pred             hCCCCCCC-HHHHHHHHH
Confidence            99999995 999999986

>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2

Probab=100.00  E-value=2.6e-34  Score=281.62  Aligned_cols=290  Identities=20%  Similarity=0.220  Sum_probs=209.7

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhh----cc----CCCCCCccCCCeeecCCcchhhhcC--CC
Q 018503           48 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAE----LI----FPGKKTRFFPGVMIAEEPQWRDCIQ--GS  117 (355)
Q Consensus        48 ~~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~----~~----~~~~~~~~~~~~d~~~~~~~~~~~~--~~  117 (355)
                      +++|+||||||+||||++|+++|+++|++|++++|+.....    .+    ....   ....+|+.|.+.+.++++  ++
T Consensus         9 ~~~~~ilVTGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~v---~~v~~Dl~d~~~l~~~~~~~~~   85 (699)
T 1z45_A            9 STSKIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHI---PFYEVDLCDRKGLEKVFKEYKI   85 (699)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHHTSCC---CEEECCTTCHHHHHHHHHHSCC
T ss_pred             cCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCcchHHHHHHHhhccCCce---EEEEcCCCCHHHHHHHHHhCCC
Confidence            34579999999999999999999999999999999764321    00    0111   134578889999998887  89


Q ss_pred             cEEEECCCCCCCCCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCCC----CccccCCCCC--C
Q 018503          118 TAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSE----TEVFDESSPS--G  191 (355)
Q Consensus       118 d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~----~~~~~e~~~~--~  191 (355)
                      |+|||+|+..... .....+...+++|+.++.++++++++  .+++++|++||.++  ||...    ..+++|+.+.  .
T Consensus        86 D~Vih~A~~~~~~-~~~~~~~~~~~~Nv~gt~~ll~a~~~--~~~~~iV~~SS~~v--yg~~~~~~~~~~~~E~~~~~p~  160 (699)
T 1z45_A           86 DSVIHFAGLKAVG-ESTQIPLRYYHNNILGTVVLLELMQQ--YNVSKFVFSSSATV--YGDATRFPNMIPIPEECPLGPT  160 (699)
T ss_dssp             CEEEECCSCCCHH-HHHHSHHHHHHHHHHHHHHHHHHHHH--HTCCEEEEEEEGGG--GCCGGGSTTCCSBCTTSCCCCC
T ss_pred             CEEEECCcccCcC-ccccCHHHHHHHHHHHHHHHHHHHHH--cCCCEEEEECcHHH--hCCCccccccCCccccCCCCCC
Confidence            9999999964211 11234567889999999999999988  68899999999988  87532    2456676553  3


Q ss_pred             Chh-HHHHHHHHHHHHhccC--CCCeEEEEEecEEEeCCCCc---------ccchHHHH-HHHhC--CCC---C------
Q 018503          192 NDY-LAEVCREWEGTALKVN--KDVRLALIRIGIVLGKDGGA---------LAKMIPLF-MMFAG--GPL---G------  247 (355)
Q Consensus       192 ~~y-~~k~~~~~~~~~~~~~--~~~~~~i~Rp~~i~G~~~~~---------~~~~~~~~-~~~~~--~~~---~------  247 (355)
                      ..| .+|...|.+...+..+  .+++++++||+++||+....         ...+++.+ ....+  .++   +      
T Consensus       161 ~~Y~~sK~~~E~~~~~~~~~~~~g~~~~ilR~~~vyG~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~  240 (699)
T 1z45_A          161 NPYGHTKYAIENILNDLYNSDKKSWKFAILRYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREKLYIFGDDYDSR  240 (699)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHSTTSCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHTTSSSCCCCC------C
T ss_pred             ChHHHHHHHHHHHHHHHHHhccCCCcEEEEEeccccCCCcccccccccccchhHHHHHHHHHHhcCCCceEEeCCcccCC
Confidence            567 7787777776665444  68999999999999985311         12344433 33222  232   3      


Q ss_pred             CCCcceecccHHHHHHHHHHHHhCC------C-CCCceEecCCCccCHHHHHHHHHHHhCCCCCCCCcHHHHHHHhcccc
Q 018503          248 SGQQWFSWIHLDDIVNLIYEALSNP------S-YRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGA  320 (355)
Q Consensus       248 ~~~~~~~~i~v~Dva~~~~~~~~~~------~-~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~  320 (355)
                      ++++.+++||++|+|++++.++...      . .+++||+++++++|+.|+++.+++.+|++..+....    ...++  
T Consensus       241 ~g~~~~~~i~v~Dva~a~~~a~~~~~~~~~~~~~~~~yni~~~~~~s~~el~~~i~~~~g~~~~~~~~~----~~~~~--  314 (699)
T 1z45_A          241 DGTPIRDYIHVVDLAKGHIAALQYLEAYNENEGLCREWNLGSGKGSTVFEVYHAFCKASGIDLPYKVTG----RRAGD--  314 (699)
T ss_dssp             CSSCEECEEEHHHHHHHHHHHHHHHHHSCTTCCEEEEEEESCSCCEEHHHHHHHHHHHHTCCCCC---------------
T ss_pred             CCCeeEeeEEHHHHHHHHHHHHhhhhccccccCCceEEEECCCCCCcHHHHHHHHHHHhCCCCCceecC----CCCCc--
Confidence            5788899999999999999998642      1 245999999999999999999999999873222111    11111  


Q ss_pred             eeeecCccccchhHH-hCCCCCCccCHHHHHHHHhC
Q 018503          321 FVVLEGQRVVPARAK-ELGFPFKYRYVKDALKAIMS  355 (355)
Q Consensus       321 ~~~~~~~~~~~~k~~-~lG~~p~~~~~~~~l~~~~~  355 (355)
                         .....++++|++ .|||+|+++ ++++|+++++
T Consensus       315 ---~~~~~~d~~ka~~~LG~~p~~~-l~egl~~~~~  346 (699)
T 1z45_A          315 ---VLNLTAKPDRAKRELKWQTELQ-VEDSCKDLWK  346 (699)
T ss_dssp             ---CCCCCBCCHHHHHHTCCCCCCC-HHHHHHHHHH
T ss_pred             ---cccccCCHHHHHHhcCCCCCCC-HHHHHHHHHH
Confidence               134567778885 599999996 9999999863

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}

Probab=100.00  E-value=6e-33  Score=235.03  Aligned_cols=221  Identities=13%  Similarity=0.105  Sum_probs=164.1

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcCCCcEEEECCCCCCC
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTPIG  129 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~~~~  129 (355)
                      +|+||||||||+||++|+++|+++|++|++++|++++...+....   ....+|+.|.+++.++++++|+|||+|+... 
T Consensus         4 m~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~---~~~~~Dl~d~~~~~~~~~~~d~vi~~a~~~~-   79 (227)
T 3dhn_A            4 VKKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIKIENEHL---KVKKADVSSLDEVCEVCKGADAVISAFNPGW-   79 (227)
T ss_dssp             CCEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGGCCCCCTTE---EEECCCTTCHHHHHHHHTTCSEEEECCCC---
T ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcccchhccCce---EEEEecCCCHHHHHHHhcCCCEEEEeCcCCC-
Confidence            479999999999999999999999999999999987654432211   1445799999999999999999999998531 


Q ss_pred             CCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCCCCcc-ccCCCCCCChh-HHHHHHHHHHHHh
Q 018503          130 TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEV-FDESSPSGNDY-LAEVCREWEGTAL  207 (355)
Q Consensus       130 ~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~~~~-~~e~~~~~~~y-~~k~~~~~~~~~~  207 (355)
                            .....+++|+.++.++++++++  .++++|||+||.++  |+...+.. .++...+...| .+|...|.....+
T Consensus        80 ------~~~~~~~~n~~~~~~l~~~~~~--~~~~~~v~~Ss~~~--~~~~~~~~~~~~~~~p~~~Y~~sK~~~e~~~~~~  149 (227)
T 3dhn_A           80 ------NNPDIYDETIKVYLTIIDGVKK--AGVNRFLMVGGAGS--LFIAPGLRLMDSGEVPENILPGVKALGEFYLNFL  149 (227)
T ss_dssp             ----------CCSHHHHHHHHHHHHHHH--TTCSEEEEECCSTT--SEEETTEEGGGTTCSCGGGHHHHHHHHHHHHHTG
T ss_pred             ------CChhHHHHHHHHHHHHHHHHHH--hCCCEEEEeCChhh--ccCCCCCccccCCcchHHHHHHHHHHHHHHHHHH
Confidence                  1123678899999999999999  78899999999886  43222222 22222344567 7787777777777


Q ss_pred             ccCCCCeEEEEEecEEEeCCCCcccchHHHHHHHhCCCCCCCCcceecccHHHHHHHHHHHHhCCC-CCCceEecCCCcc
Q 018503          208 KVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPS-YRGVINGTAPNPV  286 (355)
Q Consensus       208 ~~~~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~-~~~~~~i~~~~~~  286 (355)
                      ....+++++++||+.+||++..... +.    .....++..++. ++++|++|+|++++.+++++. .+++|+++++++.
T Consensus       150 ~~~~~~~~~ilrp~~v~g~~~~~~~-~~----~~~~~~~~~~~~-~~~i~~~Dva~ai~~~l~~~~~~g~~~~~~~~~~~  223 (227)
T 3dhn_A          150 MKEKEIDWVFFSPAADMRPGVRTGR-YR----LGKDDMIVDIVG-NSHISVEDYAAAMIDELEHPKHHQERFTIGYLEHH  223 (227)
T ss_dssp             GGCCSSEEEEEECCSEEESCCCCCC-CE----EESSBCCCCTTS-CCEEEHHHHHHHHHHHHHSCCCCSEEEEEECCSCC
T ss_pred             hhccCccEEEEeCCcccCCCccccc-ee----ecCCCcccCCCC-CcEEeHHHHHHHHHHHHhCccccCcEEEEEeehhc
Confidence            7678999999999999999753211 11    111222222233 899999999999999999987 4559999999998


Q ss_pred             CHHH
Q 018503          287 RLAE  290 (355)
Q Consensus       287 s~~e  290 (355)
                      ++.+
T Consensus       224 ~~~~  227 (227)
T 3dhn_A          224 HHHH  227 (227)
T ss_dssp             C---
T ss_pred             ccCC
Confidence            8764

>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii}

Probab=100.00  E-value=7.8e-33  Score=240.91  Aligned_cols=262  Identities=16%  Similarity=0.139  Sum_probs=191.1

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcCC--CcEEEECCCCCC
Q 018503           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQG--STAVVNLAGTPI  128 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~--~d~vi~~a~~~~  128 (355)
                      |+||||||||+||++++++|++ |++|++++|+....    .      ...+|+.|++++.+++++  +|+|||+||...
T Consensus         1 m~ilVtGatG~iG~~l~~~L~~-g~~V~~~~r~~~~~----~------~~~~Dl~~~~~~~~~~~~~~~d~vi~~a~~~~   69 (273)
T 2ggs_A            1 MRTLITGASGQLGIELSRLLSE-RHEVIKVYNSSEIQ----G------GYKLDLTDFPRLEDFIIKKRPDVIINAAAMTD   69 (273)
T ss_dssp             CCEEEETTTSHHHHHHHHHHTT-TSCEEEEESSSCCT----T------CEECCTTSHHHHHHHHHHHCCSEEEECCCCCC
T ss_pred             CEEEEECCCChhHHHHHHHHhc-CCeEEEecCCCcCC----C------CceeccCCHHHHHHHHHhcCCCEEEECCcccC
Confidence            5899999999999999999995 89999999987421    1      134788999999988875  999999999642


Q ss_pred             CCCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCCCCccccCCCCCC--Chh-HHHHHHHHHHH
Q 018503          129 GTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSG--NDY-LAEVCREWEGT  205 (355)
Q Consensus       129 ~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~--~~y-~~k~~~~~~~~  205 (355)
                      . .....++...+++|+.++.++++++.+  .+. ++||+||.++  |+...+ +++|+++..  ..| .+|...|....
T Consensus        70 ~-~~~~~~~~~~~~~n~~~~~~l~~~~~~--~~~-~iv~~SS~~~--~~~~~~-~~~e~~~~~~~~~Y~~sK~~~e~~~~  142 (273)
T 2ggs_A           70 V-DKCEIEKEKAYKINAEAVRHIVRAGKV--IDS-YIVHISTDYV--FDGEKG-NYKEEDIPNPINYYGLSKLLGETFAL  142 (273)
T ss_dssp             H-HHHHHCHHHHHHHHTHHHHHHHHHHHH--TTC-EEEEEEEGGG--SCSSSC-SBCTTSCCCCSSHHHHHHHHHHHHHC
T ss_pred             h-hhhhhCHHHHHHHhHHHHHHHHHHHHH--hCC-eEEEEeccee--EcCCCC-CcCCCCCCCCCCHHHHHHHHHHHHHh
Confidence            1 122356678899999999999999998  565 8999999998  875433 677777653  456 55554444332


Q ss_pred             HhccCCCCeEEEEEecEEEeCCCCcccchHHHH--HHHhCCCC-CCCCcceecccHHHHHHHHHHHHhCCCCCCceEecC
Q 018503          206 ALKVNKDVRLALIRIGIVLGKDGGALAKMIPLF--MMFAGGPL-GSGQQWFSWIHLDDIVNLIYEALSNPSYRGVINGTA  282 (355)
Q Consensus       206 ~~~~~~~~~~~i~Rp~~i~G~~~~~~~~~~~~~--~~~~~~~~-~~~~~~~~~i~v~Dva~~~~~~~~~~~~~~~~~i~~  282 (355)
                      .      ++++++||+.+||+.  .   +...+  ....+.++ ..++ .+++++++|+|++++.++.++. .|+||+++
T Consensus       143 ~------~~~~~iR~~~v~G~~--~---~~~~~~~~~~~~~~~~~~~~-~~~~~~~~dva~~i~~~~~~~~-~g~~~i~~  209 (273)
T 2ggs_A          143 Q------DDSLIIRTSGIFRNK--G---FPIYVYKTLKEGKTVFAFKG-YYSPISARKLASAILELLELRK-TGIIHVAG  209 (273)
T ss_dssp             C------TTCEEEEECCCBSSS--S---HHHHHHHHHHTTCCEEEESC-EECCCBHHHHHHHHHHHHHHTC-CEEEECCC
T ss_pred             C------CCeEEEecccccccc--H---HHHHHHHHHHcCCCEEeecC-CCCceEHHHHHHHHHHHHhcCc-CCeEEECC
Confidence            2      678999999999831  1   22222  22344443 1223 7899999999999999998764 67999999


Q ss_pred             CCccCHHHHHHHHHHHhCCCCCCCCcHHHHHHHhcccceeeecCccccchhHHh-CCCCC-CccCHHHHH
Q 018503          283 PNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKE-LGFPF-KYRYVKDAL  350 (355)
Q Consensus       283 ~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~-lG~~p-~~~~~~~~l  350 (355)
                       +++|+.|+++.+.+.+|.+..+..+.+.. .    .......+..++++|+++ +||+| .++ ++++|
T Consensus       210 -~~~s~~e~~~~~~~~~g~~~~~~~~~~~~-~----~~~~~~~~~~~d~~k~~~~lG~~p~~~~-l~~~~  272 (273)
T 2ggs_A          210 -ERISRFELALKIKEKFNLPGEVKEVDEVR-G----WIAKRPYDSSLDSSRARKILSTDFYTLD-LDGMV  272 (273)
T ss_dssp             -CCEEHHHHHHHHHHHTTCCSCEEEESSCT-T----CCSCCCSBCCBCCHHHHHHCSSCCCSCC-GGGCC
T ss_pred             -CcccHHHHHHHHHHHhCCChhhccccccc-c----cccCCCcccccCHHHHHHHhCCCCCCcc-ccccc
Confidence             99999999999999999874332222110 0    001112456788899975 99999 454 88765

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D

Probab=100.00  E-value=3.8e-32  Score=238.30  Aligned_cols=265  Identities=15%  Similarity=0.157  Sum_probs=191.3

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhC--CCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcCCCcEEEECCCCCC
Q 018503           51 MTVSVTGATGFIGRRLVQRLQAD--NHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTPI  128 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~~~  128 (355)
                      |+|||||||||||++++++|+++  |++|++++|++.+...+.....  ....+|+.|++++.++++++|+|||+|+.. 
T Consensus         1 ~~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~l~~~~~--~~~~~D~~d~~~l~~~~~~~d~vi~~a~~~-   77 (287)
T 2jl1_A            1 FSIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKASTLADQGV--EVRHGDYNQPESLQKAFAGVSKLLFISGPH-   77 (287)
T ss_dssp             CCEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTHHHHHTTC--EEEECCTTCHHHHHHHTTTCSEEEECCCCC-
T ss_pred             CeEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHhHHhhcCC--eEEEeccCCHHHHHHHHhcCCEEEEcCCCC-
Confidence            57999999999999999999998  9999999998765433211100  134578999999999999999999999852 


Q ss_pred             CCCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCChh-HHHHHHHHHHHHh
Q 018503          129 GTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-LAEVCREWEGTAL  207 (355)
Q Consensus       129 ~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~~y-~~k~~~~~~~~~~  207 (355)
                         ...       ++|+.++.++++++++  .++++|||+||.++  |+.            ...| .+|...|....  
T Consensus        78 ---~~~-------~~n~~~~~~l~~a~~~--~~~~~~v~~Ss~~~--~~~------------~~~y~~~K~~~E~~~~--  129 (287)
T 2jl1_A           78 ---YDN-------TLLIVQHANVVKAARD--AGVKHIAYTGYAFA--EES------------IIPLAHVHLATEYAIR--  129 (287)
T ss_dssp             ---SCH-------HHHHHHHHHHHHHHHH--TTCSEEEEEEETTG--GGC------------CSTHHHHHHHHHHHHH--
T ss_pred             ---cCc-------hHHHHHHHHHHHHHHH--cCCCEEEEECCCCC--CCC------------CCchHHHHHHHHHHHH--
Confidence               111       5789999999999999  78999999999876  421            1246 66655555443  


Q ss_pred             ccCCCCeEEEEEecEEEeCCCCcccchHHHHHHHhCCC-CCCCCcceecccHHHHHHHHHHHHhCCC-CCCceEecCCCc
Q 018503          208 KVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGP-LGSGQQWFSWIHLDDIVNLIYEALSNPS-YRGVINGTAPNP  285 (355)
Q Consensus       208 ~~~~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~v~Dva~~~~~~~~~~~-~~~~~~i~~~~~  285 (355)
                        ..+++++++||+.++|+...   .++... ...+.. ...++..++++|++|+|++++.++.++. .+++||++++++
T Consensus       130 --~~~~~~~ilrp~~~~~~~~~---~~~~~~-~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~g~~~~i~~~~~  203 (287)
T 2jl1_A          130 --TTNIPYTFLRNALYTDFFVN---EGLRAS-TESGAIVTNAGSGIVNSVTRNELALAAATVLTEEGHENKTYNLVSNQP  203 (287)
T ss_dssp             --HTTCCEEEEEECCBHHHHSS---GGGHHH-HHHTEEEESCTTCCBCCBCHHHHHHHHHHHHTSSSCTTEEEEECCSSC
T ss_pred             --HcCCCeEEEECCEeccccch---hhHHHH-hhCCceeccCCCCccCccCHHHHHHHHHHHhcCCCCCCcEEEecCCCc
Confidence              26899999999988876411   122111 112222 2456778999999999999999998764 355999999999


Q ss_pred             cCHHHHHHHHHHHhCCCC-CCCCcHHHHHHHh---cccce-----------eeecCccccchhHHh-CCCCCCccCHHHH
Q 018503          286 VRLAEMCDHLGNVLGRPS-WLPVPEFALKAVL---GEGAF-----------VVLEGQRVVPARAKE-LGFPFKYRYVKDA  349 (355)
Q Consensus       286 ~s~~el~~~i~~~~g~~~-~~~~~~~~~~~~~---~~~~~-----------~~~~~~~~~~~k~~~-lG~~p~~~~~~~~  349 (355)
                      +|+.|+++.+.+.+|++. ..+.|.+......   +.+..           ........+++|+++ +|  |.++ ++|+
T Consensus       204 ~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG--~~~~-l~e~  280 (287)
T 2jl1_A          204 WTFDELAQILSEVSGKKVVHQPVSFEEEKNFLVNAGVPEPFTEITAAIYDAISKGEASKTSDDLQKLIG--SLTP-LKET  280 (287)
T ss_dssp             BCHHHHHHHHHHHHSSCCEEEECCHHHHHHHHHHTTCCHHHHHHHHHHHHHHHTTTTCCCCSHHHHHHS--SCCC-HHHH
T ss_pred             CCHHHHHHHHHHHHCCcceEEeCCHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCCCcCCchHHHHHhC--CCCC-HHHH
Confidence            999999999999999873 3456655443221   11100           001233455677765 89  6664 9999


Q ss_pred             HHHHhC
Q 018503          350 LKAIMS  355 (355)
Q Consensus       350 l~~~~~  355 (355)
                      |+++++
T Consensus       281 l~~~~~  286 (287)
T 2jl1_A          281 VKQALK  286 (287)
T ss_dssp             HHHHHT
T ss_pred             HHHHhc
Confidence            999874

>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}

Probab=100.00  E-value=5.8e-32  Score=250.27  Aligned_cols=241  Identities=13%  Similarity=0.145  Sum_probs=179.0

Q ss_pred             cCCCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhc---c----------------CCCCCCccCCCeeecCC
Q 018503           47 KASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAEL---I----------------FPGKKTRFFPGVMIAEE  107 (355)
Q Consensus        47 ~~~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~---~----------------~~~~~~~~~~~~d~~~~  107 (355)
                      ...+|+|||||||||||++|+++|++.|++|++++|+......   +                ....   ....+|+.|+
T Consensus        66 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v---~~v~~Dl~d~  142 (427)
T 4f6c_A           66 HRPLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNI---EVIVGDFECM  142 (427)
T ss_dssp             CCCCEEEEEECTTSHHHHHHHHHHTTTEEEEEEEEECSSHHHHHHHHHHHHHHHSCHHHHHHHHTTE---EEEEECC---
T ss_pred             CCCCCEEEEecCCcHHHHHHHHHHHcCCCEEEEEECCCChHHHHHHHHHHHHHhccccccccccCce---EEEeCCCCCc
Confidence            3455799999999999999999999999999999999872110   0                0110   1345688888


Q ss_pred             cchhhhcCCCcEEEECCCCCCCCCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeee--CCCCCcccc
Q 018503          108 PQWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYY--GTSETEVFD  185 (355)
Q Consensus       108 ~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~y--g~~~~~~~~  185 (355)
                      +.+. .+.++|+|||+|+...    ....+...+++|+.++.++++++.+   ++++|||+||.+++.+  +.....+++
T Consensus       143 ~~l~-~~~~~d~Vih~A~~~~----~~~~~~~~~~~Nv~g~~~l~~aa~~---~~~~~v~~SS~~~G~~~~~~~~~~~~~  214 (427)
T 4f6c_A          143 DDVV-LPENMDTIIHAGARTD----HFGDDDEFEKVNVQGTVDVIRLAQQ---HHARLIYVSTISVGTYFDIDTEDVTFS  214 (427)
T ss_dssp             CCCC-CSSCCSEEEECCCCC-----------CHHHHHHHHHHHHHHHHHH---TTCEEEEEEEGGGGSEECSSCSCCEEC
T ss_pred             ccCC-CcCCCCEEEECCcccC----CCCCHHHHHHHHHHHHHHHHHHHHh---cCCcEEEECchHhCCCccCCCCCcccc
Confidence            8887 7789999999999742    2345567889999999999999998   5689999999876211  123456778


Q ss_pred             CCCC-----CCChh-HHHHHHHHHHHHhccCCCCeEEEEEecEEEeCCCCcc------cchH-HHH-HHHhCCCC--CCC
Q 018503          186 ESSP-----SGNDY-LAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGAL------AKMI-PLF-MMFAGGPL--GSG  249 (355)
Q Consensus       186 e~~~-----~~~~y-~~k~~~~~~~~~~~~~~~~~~~i~Rp~~i~G~~~~~~------~~~~-~~~-~~~~~~~~--~~~  249 (355)
                      |+++     +...| .+|...|.+...+.. .|++++++||++|||+.....      ..++ ..+ ....+..+  +.+
T Consensus       215 E~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~-~g~~~~ivRpg~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  293 (427)
T 4f6c_A          215 EADVYKGQLLTSPYTRSKFYSELKVLEAVN-NGLDGRIVRVGNLTSPYNGRWHMRNIKTNRFSMVMNDLLQLDCIGVSMA  293 (427)
T ss_dssp             TTCSCSSCCCCSHHHHHHHHHHHHHHHHHH-TTCCEEEEEECCEESCSSSCCCCTTGGGCHHHHHHHHHHHSSEEEHHHH
T ss_pred             ccccccCCCCCCchHHHHHHHHHHHHHHHH-cCCCEEEEeCCeeecCCCCCccccCcchHHHHHHHHHHHhcCCCCCccc
Confidence            8776     55678 788877777766543 699999999999999975432      1112 222 33344444  336


Q ss_pred             CcceecccHHHHHHHHHHHHhCCCCCCceEecCCCccCHHHHHHHHHHHhC
Q 018503          250 QQWFSWIHLDDIVNLIYEALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLG  300 (355)
Q Consensus       250 ~~~~~~i~v~Dva~~~~~~~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g  300 (355)
                      +..+++++++|+|++++.++..+..+++||+++++++++.|+++.+.+ ++
T Consensus       294 ~~~~~~v~v~DvA~ai~~~~~~~~~g~~~~l~~~~~~s~~el~~~i~~-~g  343 (427)
T 4f6c_A          294 EMPVDFSFVDTTARQIVALAQVNTPQIIYHVLSPNKMPVKSLLECVKR-KE  343 (427)
T ss_dssp             TCEECCEEHHHHHHHHHHHTTSCCCCSEEEESCSCCEEHHHHHHHHHS-SC
T ss_pred             cceEEEeeHHHHHHHHHHHHcCCCCCCEEEecCCCCCcHHHHHHHHHH-cC
Confidence            788999999999999999999876677999999999999999999999 56

>4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus}

Probab=99.98  E-value=7.6e-32  Score=254.68  Aligned_cols=292  Identities=12%  Similarity=0.081  Sum_probs=201.6

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhc-------------------cCCCCCCccCCCeeecCCc
Q 018503           48 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAEL-------------------IFPGKKTRFFPGVMIAEEP  108 (355)
Q Consensus        48 ~~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-------------------~~~~~~~~~~~~~d~~~~~  108 (355)
                      ..+|+|||||||||||++|+++|++.|++|++++|+......                   .....   ....+|+.+++
T Consensus       148 ~~~~~VLVTGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v---~~v~~Dl~d~~  224 (508)
T 4f6l_B          148 RPLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNI---EVIVGDFECMD  224 (508)
T ss_dssp             CCCEEEEESCTTSHHHHHHHHHTBTTEEEEEEEEESSSHHHHHHHHHHHHHHHSCHHHHHHHSTTE---EEEEEBTTBCS
T ss_pred             CCCCeEEEECCccchHHHHHHHHHhcCCEEEEEECCCChHHHHHHHHHHHHHhcccccchhccCce---EEEecCCcccc
Confidence            345799999999999999999999899999999999873210                   01111   13456888888


Q ss_pred             chhhhcCCCcEEEECCCCCCCCCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeC--CCCCccccC
Q 018503          109 QWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYG--TSETEVFDE  186 (355)
Q Consensus       109 ~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg--~~~~~~~~e  186 (355)
                      .+. +..++|+|||+|+...    .......++++|+.++.+++++|.+   +.++|||+||.+++.|.  .....+++|
T Consensus       225 ~l~-~~~~~D~Vih~Aa~~~----~~~~~~~~~~~Nv~gt~~ll~~a~~---~~~~~v~iSS~~vG~~~~~~~~~~~~~E  296 (508)
T 4f6l_B          225 DVV-LPENMDTIIHAGARTD----HFGDDDEFEKVNVQGTVDVIRLAQQ---HHARLIYVSTISVGTYFDIDTEDVTFSE  296 (508)
T ss_dssp             SCC-CSSCCSEEEECCCC------------CCHHHHHHHHHHHHHHHHT---TTCEEEEEEESCTTSEECTTCSCCEECT
T ss_pred             cCC-CccCCCEEEECCceec----CCCCHHHHhhhHHHHHHHHHHHHHh---CCCcEEEeCChhhccCCccCCcCccccc
Confidence            777 7789999999999742    1234567788999999999999998   56899999998872222  234557788


Q ss_pred             CCC-----CCChh-HHHHHHHHHHHHhccCCCCeEEEEEecEEEeCCCCcc------cc-hHHHH-HHHhCCCC--CCCC
Q 018503          187 SSP-----SGNDY-LAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGAL------AK-MIPLF-MMFAGGPL--GSGQ  250 (355)
Q Consensus       187 ~~~-----~~~~y-~~k~~~~~~~~~~~~~~~~~~~i~Rp~~i~G~~~~~~------~~-~~~~~-~~~~~~~~--~~~~  250 (355)
                      +++     +...| .+|...|.+...+.. .|++++++||+.|||+..+..      .. +...+ ....+..+  +.++
T Consensus       297 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~-~gi~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~  375 (508)
T 4f6l_B          297 ADVYKGQLLTSPYTRSKFYSELKVLEAVN-NGLDGRIVRVGNLTSPYNGRWHMRNIKTNRFSMVMNDLLQLDCIGVSMAE  375 (508)
T ss_dssp             TCSCSSBCCCSHHHHHHHHHHHHHHHHHH-TTCEEEEEEECCEESCSSSCCCCTTCTTCHHHHHHHHHTTCSEEETTGGG
T ss_pred             ccccccccCCCcHHHHHHHHHHHHHHHHH-cCCCEEEEecceeccCCCCCcccCCcchHHHHHHHHHHHHcCCCCCCccC
Confidence            776     45678 788887777766543 699999999999999976432      11 22223 22333333  3468


Q ss_pred             cceecccHHHHHHHHHHHHhCCCCCCceEecCCCccCHHHHHHHHHHHhCCCCCCCCcHHHHHHHhcccce--------e
Q 018503          251 QWFSWIHLDDIVNLIYEALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAF--------V  322 (355)
Q Consensus       251 ~~~~~i~v~Dva~~~~~~~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~--------~  322 (355)
                      ..++|++++|+|++++.++..+..+++||+++++++++.|+++.+++..  -..++.+.|...........        .
T Consensus       376 ~~~~~v~v~DvA~ai~~~~~~~~~~~~~nl~~~~~~s~~el~~~i~~~~--~~~~~~~~w~~~l~~~~~~~~~~~~~~~~  453 (508)
T 4f6l_B          376 MPVDFSFVDTTARQIVALAQVNTPQIIYHVLSPNKMPVKSLLECVKRKE--IELVSDESFNEILQKQDMYETIGLTSVDR  453 (508)
T ss_dssp             SEEECEEHHHHHHHHHHHTTBCCSCSEEEESCSCEEEHHHHHHHHHSSC--CEEECHHHHHHHHHTTCCHHHHHHHHTGG
T ss_pred             ceEEEEcHHHHHHHHHHHHhCCCCCCEEEeCCCCCCCHHHHHHHHHHcC--CcccCHHHHHHHHHhcCCccchhcccccc
Confidence            8999999999999999999987667799999999999999999999865  22234445443321100000        0


Q ss_pred             eecCccccc----hhHHhCCCCCCccCHHHHHHHHh
Q 018503          323 VLEGQRVVP----ARAKELGFPFKYRYVKDALKAIM  354 (355)
Q Consensus       323 ~~~~~~~~~----~k~~~lG~~p~~~~~~~~l~~~~  354 (355)
                      ......++.    .+++++||.+... -++.+++++
T Consensus       454 ~~~~~~~d~~~~~~~l~~~G~~~~~~-~~~~l~~~~  488 (508)
T 4f6l_B          454 EQQLAMIDTTLTLKIMNHISEKWPTI-TNNWLYHWA  488 (508)
T ss_dssp             GSEECEECCHHHHHHHHHHSCCCCCC-CHHHHHHHH
T ss_pred             cCcceecchHHHHHHHHHcCCCCCCC-CHHHHHHHH
Confidence            001122232    4456789987753 466666654

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}

Probab=99.97  E-value=1.3e-30  Score=228.86  Aligned_cols=265  Identities=15%  Similarity=0.147  Sum_probs=185.3

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhC-CCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcCCCcEEEECCCCCCC
Q 018503           51 MTVSVTGATGFIGRRLVQRLQAD-NHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTPIG  129 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~~~~  129 (355)
                      |+||||||||+||+++++.|++. |++|++++|++++...+.....  ....+|+.|++++.++++++|+|||+|+....
T Consensus         1 M~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~~~~~~v--~~~~~D~~d~~~l~~~~~~~d~vi~~a~~~~~   78 (289)
T 3e48_A            1 MNIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDDWRGKV--SVRQLDYFNQESMVEAFKGMDTVVFIPSIIHP   78 (289)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCGGGBTTB--EEEECCTTCHHHHHHHTTTCSEEEECCCCCCS
T ss_pred             CEEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHHHHhhhCCC--EEEEcCCCCHHHHHHHHhCCCEEEEeCCCCcc
Confidence            68999999999999999999998 9999999999876544322211  13457899999999999999999999986321


Q ss_pred             CCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCChhHHHHHHHHHHHHhcc
Q 018503          130 TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDYLAEVCREWEGTALKV  209 (355)
Q Consensus       130 ~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~~y~~k~~~~~~~~~~~~  209 (355)
                                 ...|+.++.++++++++  .++++|||+||.+.     ...      .+..   ..+.....+..  ..
T Consensus        79 -----------~~~~~~~~~~l~~aa~~--~gv~~iv~~Ss~~~-----~~~------~~~~---~~~~~~~~e~~--~~  129 (289)
T 3e48_A           79 -----------SFKRIPEVENLVYAAKQ--SGVAHIIFIGYYAD-----QHN------NPFH---MSPYFGYASRL--LS  129 (289)
T ss_dssp             -----------HHHHHHHHHHHHHHHHH--TTCCEEEEEEESCC-----STT------CCST---THHHHHHHHHH--HH
T ss_pred             -----------chhhHHHHHHHHHHHHH--cCCCEEEEEcccCC-----CCC------CCCc---cchhHHHHHHH--HH
Confidence                       12478899999999999  78999999998432     111      1111   11211111111  22


Q ss_pred             CCCCeEEEEEecEEEeCCCCcccchHHHHHHHhCCCCCCCCcceecccHHHHHHHHHHHHhCCCC-CCceEecCCCccCH
Q 018503          210 NKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSY-RGVINGTAPNPVRL  288 (355)
Q Consensus       210 ~~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~-~~~~~i~~~~~~s~  288 (355)
                      ..+++++++||+.++|+..    .++..........++.++..+++++++|+|++++.++..+.. +++||++ ++.+|+
T Consensus       130 ~~g~~~~ilrp~~~~~~~~----~~~~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~l~~~~~~g~~~~~~-~~~~s~  204 (289)
T 3e48_A          130 TSGIDYTYVRMAMYMDPLK----PYLPELMNMHKLIYPAGDGRINYITRNDIARGVIAIIKNPDTWGKRYLLS-GYSYDM  204 (289)
T ss_dssp             HHCCEEEEEEECEESTTHH----HHHHHHHHHTEECCCCTTCEEEEECHHHHHHHHHHHHHCGGGTTCEEEEC-CEEEEH
T ss_pred             HcCCCEEEEeccccccccH----HHHHHHHHCCCEecCCCCceeeeEEHHHHHHHHHHHHcCCCcCCceEEeC-CCcCCH
Confidence            3589999999999998731    122222111122236678899999999999999999998764 6699999 999999


Q ss_pred             HHHHHHHHHHhCCC-CCCCCcHHHHHHHhcc--cc-e----e----eecCccccchhH-HhCCCCCCccCHHHHHHHH
Q 018503          289 AEMCDHLGNVLGRP-SWLPVPEFALKAVLGE--GA-F----V----VLEGQRVVPARA-KELGFPFKYRYVKDALKAI  353 (355)
Q Consensus       289 ~el~~~i~~~~g~~-~~~~~~~~~~~~~~~~--~~-~----~----~~~~~~~~~~k~-~~lG~~p~~~~~~~~l~~~  353 (355)
                      .|+++.+++.+|++ ...+++..........  +. .    +    ...........+ +.+|+.|+  +++|.+++.
T Consensus       205 ~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~G~~p~--~~~~~~~~~  280 (289)
T 3e48_A          205 KELAAILSEASGTEIKYEPVSLETFAEMYDEPKGFGALLASMYHAGARGLLDQESNDFKQLVNDQPQ--TLQSFLQEN  280 (289)
T ss_dssp             HHHHHHHHHHHTSCCEECCCCHHHHHHHTCCSTTHHHHHHHHHHHHHTTTTCCCCSHHHHHHSSCCC--CHHHHHHC-
T ss_pred             HHHHHHHHHHHCCceeEEeCCHHHHHHHhcCCccHHHHHHHHHHHHHCCCccccCchHHHHhCCCCC--CHHHHHHHH
Confidence            99999999999988 3446666555544322  10 0    0    001111222334 55899999  799998763

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*

Probab=99.97  E-value=5.4e-31  Score=230.87  Aligned_cols=262  Identities=15%  Similarity=0.147  Sum_probs=184.4

Q ss_pred             EEEEEcCCchHHHHHHHHHHhC--CCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcCCCcEEEECCCCCCC
Q 018503           52 TVSVTGATGFIGRRLVQRLQAD--NHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTPIG  129 (355)
Q Consensus        52 ~IlVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~~~~  129 (355)
                      +|||||||||||++++++|+++  |++|++++|++++...+.....  ....+|+.|++++.++++++|+|||+|+..  
T Consensus         1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~--~~~~~D~~d~~~~~~~~~~~d~vi~~a~~~--   76 (286)
T 2zcu_A            1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALAAQGI--TVRQADYGDEAALTSALQGVEKLLLISSSE--   76 (286)
T ss_dssp             CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCHHHHHTTC--EEEECCTTCHHHHHHHTTTCSEEEECC-----
T ss_pred             CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhhhhhhcCCC--eEEEcCCCCHHHHHHHHhCCCEEEEeCCCC--
Confidence            4899999999999999999998  9999999998765432211100  134578899999999999999999999842  


Q ss_pred             CCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCChh-HHHHHHHHHHHHhc
Q 018503          130 TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-LAEVCREWEGTALK  208 (355)
Q Consensus       130 ~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~~y-~~k~~~~~~~~~~~  208 (355)
                          .       +.|+.++.++++++++  .++++||++||.++  |.            ....| .+|...|.....  
T Consensus        77 ----~-------~~~~~~~~~l~~a~~~--~~~~~~v~~Ss~~~--~~------------~~~~y~~sK~~~e~~~~~--  127 (286)
T 2zcu_A           77 ----V-------GQRAPQHRNVINAAKA--AGVKFIAYTSLLHA--DT------------SPLGLADEHIETEKMLAD--  127 (286)
T ss_dssp             ----------------CHHHHHHHHHHH--HTCCEEEEEEETTT--TT------------CCSTTHHHHHHHHHHHHH--
T ss_pred             ----c-------hHHHHHHHHHHHHHHH--cCCCEEEEECCCCC--CC------------CcchhHHHHHHHHHHHHH--
Confidence                0       1478899999999998  68899999999876  52            11246 666655554432  


Q ss_pred             cCCCCeEEEEEecEEEeCCCCcccchHHHHHHHhCC-CCCCCCcceecccHHHHHHHHHHHHhCCC-CCCceEecCCCcc
Q 018503          209 VNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGG-PLGSGQQWFSWIHLDDIVNLIYEALSNPS-YRGVINGTAPNPV  286 (355)
Q Consensus       209 ~~~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~v~Dva~~~~~~~~~~~-~~~~~~i~~~~~~  286 (355)
                        .+++++++||+.++++..    .++.... ..+. .++.++..++++|++|+|++++.++.++. .+++||+++++++
T Consensus       128 --~~~~~~ilrp~~~~~~~~----~~~~~~~-~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~g~~~~i~~~~~~  200 (286)
T 2zcu_A          128 --SGIVYTLLRNGWYSENYL----ASAPAAL-EHGVFIGAAGDGKIASATRADYAAAAARVISEAGHEGKVYELAGDSAW  200 (286)
T ss_dssp             --HCSEEEEEEECCBHHHHH----TTHHHHH-HHTEEEESCTTCCBCCBCHHHHHHHHHHHHHSSSCTTCEEEECCSSCB
T ss_pred             --cCCCeEEEeChHHhhhhH----HHhHHhh-cCCceeccCCCCccccccHHHHHHHHHHHhcCCCCCCceEEEeCCCcC
Confidence              589999999987666421    1121111 1121 13556788999999999999999998764 4569999999899


Q ss_pred             CHHHHHHHHHHHhCCCC-CCCCcHHHHHHHh---cccce-----------eeecCccccchhHHh-CCCCCCccCHHHHH
Q 018503          287 RLAEMCDHLGNVLGRPS-WLPVPEFALKAVL---GEGAF-----------VVLEGQRVVPARAKE-LGFPFKYRYVKDAL  350 (355)
Q Consensus       287 s~~el~~~i~~~~g~~~-~~~~~~~~~~~~~---~~~~~-----------~~~~~~~~~~~k~~~-lG~~p~~~~~~~~l  350 (355)
                      |+.|+++.+.+.+|++. ..++|.+......   +.+..           ........+++|+++ +||.|.  +++|+|
T Consensus       201 s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~--~~~e~l  278 (286)
T 2zcu_A          201 TLTQLAAELTKQSGKQVTYQNLSEADFAAALKSVGLPDGLADMLADSDVGASKGGLFDDSKTLSKLIGHPTT--TLAESV  278 (286)
T ss_dssp             CHHHHHHHHHHHHSSCCEEEECCHHHHHHHHTTSSCCHHHHHHHHHHHHHHHTTTTCCCCCHHHHHHTSCCC--CHHHHH
T ss_pred             CHHHHHHHHHHHHCCCCceeeCCHHHHHHHHHHcCCCHHHHHHHHHHHHHHhCCCCccCchHHHHHhCcCCC--CHHHHH
Confidence            99999999999999873 3466665544321   11100           001123445677765 898655  699999


Q ss_pred             HHHhC
Q 018503          351 KAIMS  355 (355)
Q Consensus       351 ~~~~~  355 (355)
                      +++++
T Consensus       279 ~~~~~  283 (286)
T 2zcu_A          279 SHLFN  283 (286)
T ss_dssp             HGGGC
T ss_pred             HHHHh
Confidence            99874

>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}

Probab=99.97  E-value=3.5e-31  Score=247.86  Aligned_cols=257  Identities=19%  Similarity=0.239  Sum_probs=188.5

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHhC---CCeEEEEecCCchhhcc------CCC-------------CCCccCCCeeec
Q 018503           48 ASQMTVSVTGATGFIGRRLVQRLQAD---NHQVRVLTRSRSKAELI------FPG-------------KKTRFFPGVMIA  105 (355)
Q Consensus        48 ~~~~~IlVtGatG~iG~~l~~~L~~~---g~~V~~~~r~~~~~~~~------~~~-------------~~~~~~~~~d~~  105 (355)
                      ..+|+|||||||||||++|+++|++.   |++|++++|+.+.....      ...             ........+|+.
T Consensus        71 ~~~~~VLVTGatG~IG~~l~~~Ll~~~~~g~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~  150 (478)
T 4dqv_A           71 PELRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAESDEDARRRLEKTFDSGDPELLRHFKELAADRLEVVAGDKS  150 (478)
T ss_dssp             SCCCEEEEECTTSHHHHHHHHHHHHHSCTTCEEEEEECSSSHHHHHHHHHGGGCSSCHHHHHHHHHHHTTTEEEEECCTT
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhcCCCCCEEEEEECCCCcHHHHHHHHHHHHhcchhhhhhhhhhccCceEEEEeECC
Confidence            34689999999999999999999998   89999999987643110      000             000012345665


Q ss_pred             ------CCcchhhhcCCCcEEEECCCCCCCCCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCC
Q 018503          106 ------EEPQWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTS  179 (355)
Q Consensus       106 ------~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~  179 (355)
                            +.+.+.++++++|+|||+|+....     ..+...+++|+.++.+++++|.+  .++++|||+||.++  |+..
T Consensus       151 ~~~~gld~~~~~~~~~~~D~Vih~Aa~~~~-----~~~~~~~~~Nv~gt~~ll~aa~~--~~~~~~V~iSS~~v--~~~~  221 (478)
T 4dqv_A          151 EPDLGLDQPMWRRLAETVDLIVDSAAMVNA-----FPYHELFGPNVAGTAELIRIALT--TKLKPFTYVSTADV--GAAI  221 (478)
T ss_dssp             SGGGGCCHHHHHHHHHHCCEEEECCSSCSB-----SSCCEEHHHHHHHHHHHHHHHTS--SSCCCEEEEEEGGG--GTTS
T ss_pred             CcccCCCHHHHHHHHcCCCEEEECccccCC-----cCHHHHHHHHHHHHHHHHHHHHh--CCCCeEEEEeehhh--cCcc
Confidence                  555788888899999999997532     22346678999999999999999  78899999999998  8876


Q ss_pred             CCccccCCCCCC-------------Chh-HHHHHHHHHHHHhccCCCCeEEEEEecEEEeCCC--C--cccchHHHH---
Q 018503          180 ETEVFDESSPSG-------------NDY-LAEVCREWEGTALKVNKDVRLALIRIGIVLGKDG--G--ALAKMIPLF---  238 (355)
Q Consensus       180 ~~~~~~e~~~~~-------------~~y-~~k~~~~~~~~~~~~~~~~~~~i~Rp~~i~G~~~--~--~~~~~~~~~---  238 (355)
                      ...+++|+.+..             +.| .+|...|.....+..+.+++++++||++|||+..  +  ....++..+   
T Consensus       222 ~~~~~~E~~~~~p~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ivRpg~v~G~~~~~g~~~~~~~~~~l~~~  301 (478)
T 4dqv_A          222 EPSAFTEDADIRVISPTRTVDGGWAGGYGTSKWAGEVLLREANDLCALPVAVFRCGMILADTSYAGQLNMSDWVTRMVLS  301 (478)
T ss_dssp             CTTTCCSSSCHHHHCCEEECCTTSEECHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECCSSSSSCCCTTBHHHHHHHH
T ss_pred             CCCCcCCcccccccCcccccccccccchHHHHHHHHHHHHHHHHHhCCCeEEEECceeeCCCccCCcCCHHHHHHHHHHH
Confidence            666777766421             238 8888888887777665699999999999999843  1  222333322   


Q ss_pred             HHHhCCC---C-C---C---CCcceecccHHHHHHHHHHHHhC----CC-CCCceEecCCCc--cCHHHHHHHHHHHhCC
Q 018503          239 MMFAGGP---L-G---S---GQQWFSWIHLDDIVNLIYEALSN----PS-YRGVINGTAPNP--VRLAEMCDHLGNVLGR  301 (355)
Q Consensus       239 ~~~~~~~---~-~---~---~~~~~~~i~v~Dva~~~~~~~~~----~~-~~~~~~i~~~~~--~s~~el~~~i~~~~g~  301 (355)
                      ....+..   + .   +   ++..++++|++|+|++++.++..    +. .+++||++++++  +|+.|+++.+.+. |.
T Consensus       302 ~~~~g~~P~~~~~~~~~G~~~~~~~~~v~vdDvA~ai~~~~~~~~~~~~~~~~~ynv~~~~~~~~s~~el~~~l~~~-g~  380 (478)
T 4dqv_A          302 LMATGIAPRSFYEPDSEGNRQRAHFDGLPVTFVAEAIAVLGARVAGSSLAGFATYHVMNPHDDGIGLDEYVDWLIEA-GY  380 (478)
T ss_dssp             HHHHCEEESCSBCCCTTSCCCCCCCCEEEHHHHHHHHHHHHHTTC-CCCCSEEEEEESCCCCSSCSHHHHHHHHHHT-TC
T ss_pred             HHHcCcccccccccccccccccceeeeeeHHHHHHHHHHHHhhcccCCCCCCceEEecCCCCCCcCHHHHHHHHHHc-CC
Confidence            1122221   1 1   1   26788999999999999999875    32 456999999988  9999999999996 66


Q ss_pred             C-CCC-CCcHHHHHH
Q 018503          302 P-SWL-PVPEFALKA  314 (355)
Q Consensus       302 ~-~~~-~~~~~~~~~  314 (355)
                      + ..+ +++.|..+.
T Consensus       381 ~~~~i~~~~~w~~~l  395 (478)
T 4dqv_A          381 PIRRIDDFAEWLQRF  395 (478)
T ss_dssp             SCEEESSHHHHHHHH
T ss_pred             CcccCCCHHHHHHHH
Confidence            5 333 567776553

>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}

Probab=99.97  E-value=6.2e-31  Score=228.15  Aligned_cols=218  Identities=20%  Similarity=0.241  Sum_probs=167.3

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcCCCcEEEECCCCCCC
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTPIG  129 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~~~~  129 (355)
                      +|+||||||||+||++|+++|++.|++|++++|+......  ..   .....+|+.|++.+.++++++|+|||+|+..  
T Consensus         2 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~--~~---~~~~~~Dl~d~~~~~~~~~~~d~vi~~a~~~--   74 (267)
T 3ay3_A            2 LNRLLVTGAAGGVGSAIRPHLGTLAHEVRLSDIVDLGAAE--AH---EEIVACDLADAQAVHDLVKDCDGIIHLGGVS--   74 (267)
T ss_dssp             EEEEEEESTTSHHHHHHGGGGGGTEEEEEECCSSCCCCCC--TT---EEECCCCTTCHHHHHHHHTTCSEEEECCSCC--
T ss_pred             CceEEEECCCCHHHHHHHHHHHhCCCEEEEEeCCCccccC--CC---ccEEEccCCCHHHHHHHHcCCCEEEECCcCC--
Confidence            3689999999999999999999999999999998754211  11   0145579999999999999999999999964  


Q ss_pred             CCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCCC-CccccCCCCCC--Chh-HHHHHHHHHHH
Q 018503          130 TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSE-TEVFDESSPSG--NDY-LAEVCREWEGT  205 (355)
Q Consensus       130 ~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~-~~~~~e~~~~~--~~y-~~k~~~~~~~~  205 (355)
                         ........+++|+.++.++++++.+  .++++|||+||..+  |+... ..+++|+++..  ..| .+|...|.+..
T Consensus        75 ---~~~~~~~~~~~n~~~~~~l~~a~~~--~~~~~iv~~SS~~~--~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~  147 (267)
T 3ay3_A           75 ---VERPWNDILQANIIGAYNLYEAARN--LGKPRIVFASSNHT--IGYYPRTTRIDTEVPRRPDSLYGLSKCFGEDLAS  147 (267)
T ss_dssp             ---SCCCHHHHHHHTHHHHHHHHHHHHH--TTCCEEEEEEEGGG--STTSBTTSCBCTTSCCCCCSHHHHHHHHHHHHHH
T ss_pred             ---CCCCHHHHHHHHHHHHHHHHHHHHH--hCCCEEEEeCCHHH--hCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHH
Confidence               2234567889999999999999998  68899999999998  87543 45778877653  457 77877777776


Q ss_pred             HhccCCCCeEEEEEecEEEeCCCCcccchHHHHHHHhCCCCCCCCcceecccHHHHHHHHHHHHhCCCC-CCceEecCCC
Q 018503          206 ALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSY-RGVINGTAPN  284 (355)
Q Consensus       206 ~~~~~~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~-~~~~~i~~~~  284 (355)
                      .+....+++++++||+.+|+...                   .++..+++++++|+|++++.++..+.. .++|++.++.
T Consensus       148 ~~~~~~gi~~~~lrp~~v~~~~~-------------------~~~~~~~~~~~~dva~~~~~~~~~~~~~~~~~~~~~~~  208 (267)
T 3ay3_A          148 LYYHKFDIETLNIRIGSCFPKPK-------------------DARMMATWLSVDDFMRLMKRAFVAPKLGCTVVYGASAN  208 (267)
T ss_dssp             HHHHTTCCCEEEEEECBCSSSCC-------------------SHHHHHHBCCHHHHHHHHHHHHHSSCCCEEEEEECCSC
T ss_pred             HHHHHcCCCEEEEeceeecCCCC-------------------CCCeeeccccHHHHHHHHHHHHhCCCCCceeEecCCCc
Confidence            66666799999999999984321                   122346799999999999999998754 3578887665


Q ss_pred             ccCHHHHHHHHHHHhCCC
Q 018503          285 PVRLAEMCDHLGNVLGRP  302 (355)
Q Consensus       285 ~~s~~el~~~i~~~~g~~  302 (355)
                      ..++.|+.+.  +.+|.+
T Consensus       209 ~~~~~d~~~~--~~lg~~  224 (267)
T 3ay3_A          209 TESWWDNDKS--AFLGWV  224 (267)
T ss_dssp             SSCCBCCGGG--GGGCCC
T ss_pred             cccccCHHHH--HHcCCC
Confidence            4555444444  444433

>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A

Probab=99.97  E-value=3.2e-31  Score=240.69  Aligned_cols=209  Identities=21%  Similarity=0.245  Sum_probs=173.5

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhCCC-eEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcCCCcEEEECCCCCCC
Q 018503           51 MTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTPIG  129 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~~~~  129 (355)
                      |||||||||||||++|+++|+++|+ +|++++|+                     .|++++.++++++|+|||+|+....
T Consensus         1 M~VlVtGatG~iG~~l~~~L~~~g~~~v~~~d~~---------------------~d~~~l~~~~~~~d~Vih~a~~~~~   59 (369)
T 3st7_A            1 MNIVITGAKGFVGKNLKADLTSTTDHHIFEVHRQ---------------------TKEEELESALLKADFIVHLAGVNRP   59 (369)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHCCCEEEECCTT---------------------CCHHHHHHHHHHCSEEEECCCSBCT
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCEEEEECCC---------------------CCHHHHHHHhccCCEEEECCcCCCC
Confidence            6899999999999999999999999 99987774                     4577888888899999999996432


Q ss_pred             CCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCC-cEEEEeeeeeeeeCCCCCccccCCCCCCChh-HHHHHHHHHHHHh
Q 018503          130 TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVR-PSVLVSATALGYYGTSETEVFDESSPSGNDY-LAEVCREWEGTAL  207 (355)
Q Consensus       130 ~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~-~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~~y-~~k~~~~~~~~~~  207 (355)
                           ..+...++.|+.++.++++++++  .+++ ++||+||.++  |+             .+.| .+|...|.....+
T Consensus        60 -----~~~~~~~~~n~~~~~~l~~a~~~--~~~~~~~v~~Ss~~~--~~-------------~~~Y~~sK~~~E~~~~~~  117 (369)
T 3st7_A           60 -----EHDKEFSLGNVSYLDHVLDILTR--NTKKPAILLSSSIQA--TQ-------------DNPYGESKLQGEQLLREY  117 (369)
T ss_dssp             -----TCSTTCSSSCCBHHHHHHHHHTT--CSSCCEEEEEEEGGG--GS-------------CSHHHHHHHHHHHHHHHH
T ss_pred             -----CCHHHHHHHHHHHHHHHHHHHHH--hCCCCeEEEeCchhh--cC-------------CCCchHHHHHHHHHHHHH
Confidence                 23345678999999999999999  6777 8999999988  65             4567 7888888877777


Q ss_pred             ccCCCCeEEEEEecEEEeCCCCc-ccchHHHH--HHHhCCCC--CCCCcceecccHHHHHHHHHHHHhCCCC--CCceEe
Q 018503          208 KVNKDVRLALIRIGIVLGKDGGA-LAKMIPLF--MMFAGGPL--GSGQQWFSWIHLDDIVNLIYEALSNPSY--RGVING  280 (355)
Q Consensus       208 ~~~~~~~~~i~Rp~~i~G~~~~~-~~~~~~~~--~~~~~~~~--~~~~~~~~~i~v~Dva~~~~~~~~~~~~--~~~~~i  280 (355)
                      ..+.+++++++||+++||+.... ...+++.+  ....+.++  .+++..++++|++|+|++++.++..+..  +++||+
T Consensus       118 ~~~~g~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~~~~~~~~i  197 (369)
T 3st7_A          118 AEEYGNTVYIYRWPNLFGKWCKPNYNSVIATFCYKIARNEEIQVNDRNVELTLNYVDDIVAEIKRAIEGTPTIENGVPTV  197 (369)
T ss_dssp             HHHHCCCEEEEEECEEECTTCCTTSSCHHHHHHHHHHTTCCCCCSCTTCEEEEEEHHHHHHHHHHHHHTCCCEETTEECC
T ss_pred             HHHhCCCEEEEECCceeCCCCCCCcchHHHHHHHHHHcCCCeEecCCCeEEEEEEHHHHHHHHHHHHhCCcccCCceEEe
Confidence            76679999999999999997532 23344433  33445544  5688899999999999999999998876  689999


Q ss_pred             cCCCccCHHHHHHHHHHHhCCC
Q 018503          281 TAPNPVRLAEMCDHLGNVLGRP  302 (355)
Q Consensus       281 ~~~~~~s~~el~~~i~~~~g~~  302 (355)
                      ++++++|+.|+++.+++.+|.+
T Consensus       198 ~~~~~~s~~e~~~~~~~~~g~~  219 (369)
T 3st7_A          198 PNVFKVTLGEIVDLLYKFKQSR  219 (369)
T ss_dssp             SCCEEEEHHHHHHHHHHHHHHH
T ss_pred             CCCCceeHHHHHHHHHHHhCCC
Confidence            9999999999999999999865

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*

Probab=99.97  E-value=1.9e-30  Score=232.91  Aligned_cols=232  Identities=16%  Similarity=0.224  Sum_probs=179.1

Q ss_pred             cCCCCEEEEEcCCchHHHHHHHHHHhC-CC-eEEEEecCCchhhccCCC--CCCccCCCeeecCCcchhhhcCCCcEEEE
Q 018503           47 KASQMTVSVTGATGFIGRRLVQRLQAD-NH-QVRVLTRSRSKAELIFPG--KKTRFFPGVMIAEEPQWRDCIQGSTAVVN  122 (355)
Q Consensus        47 ~~~~~~IlVtGatG~iG~~l~~~L~~~-g~-~V~~~~r~~~~~~~~~~~--~~~~~~~~~d~~~~~~~~~~~~~~d~vi~  122 (355)
                      ++.+|+||||||||+||++|+++|++. |+ +|++++|++.+...+...  ........+|+.|.+.+.++++++|+|||
T Consensus        18 ~~~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~D~Vih   97 (344)
T 2gn4_A           18 MLDNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFNDPRMRFFIGDVRDLERLNYALEGVDICIH   97 (344)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHHCCTTEEEEECCTTCHHHHHHHTTTCSEEEE
T ss_pred             hhCCCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHhcCCCEEEEECCCCCHHHHHHHHhcCCEEEE
Confidence            345689999999999999999999999 97 999999987654322110  00001344688999999999999999999


Q ss_pred             CCCCCCCCCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCChh-HHHHHHH
Q 018503          123 LAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-LAEVCRE  201 (355)
Q Consensus       123 ~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~~y-~~k~~~~  201 (355)
                      +||.... ......+...+++|+.++.++++++..  .++++||++||..+  +.            +.+.| .+|...|
T Consensus        98 ~Aa~~~~-~~~~~~~~~~~~~Nv~gt~~l~~aa~~--~~v~~~V~~SS~~~--~~------------p~~~Y~~sK~~~E  160 (344)
T 2gn4_A           98 AAALKHV-PIAEYNPLECIKTNIMGASNVINACLK--NAISQVIALSTDKA--AN------------PINLYGATKLCSD  160 (344)
T ss_dssp             CCCCCCH-HHHHHSHHHHHHHHHHHHHHHHHHHHH--TTCSEEEEECCGGG--SS------------CCSHHHHHHHHHH
T ss_pred             CCCCCCC-CchhcCHHHHHHHHHHHHHHHHHHHHh--CCCCEEEEecCCcc--CC------------CccHHHHHHHHHH
Confidence            9997421 122345678899999999999999999  78999999999765  32            24578 8888888


Q ss_pred             HHHHHhccC---CCCeEEEEEecEEEeCCCCcccchHHHH--HHHhCC-C--CCCCCcceecccHHHHHHHHHHHHhCCC
Q 018503          202 WEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLF--MMFAGG-P--LGSGQQWFSWIHLDDIVNLIYEALSNPS  273 (355)
Q Consensus       202 ~~~~~~~~~---~~~~~~i~Rp~~i~G~~~~~~~~~~~~~--~~~~~~-~--~~~~~~~~~~i~v~Dva~~~~~~~~~~~  273 (355)
                      .....+...   .+++++++||+++||+...    +++.+  ....+. +  +.+++..++++|++|+|++++.+++++.
T Consensus       161 ~~~~~~~~~~~~~g~~~~~vRpg~v~g~~~~----~i~~~~~~~~~g~~~~~i~~~~~~r~~i~v~D~a~~v~~~l~~~~  236 (344)
T 2gn4_A          161 KLFVSANNFKGSSQTQFSVVRYGNVVGSRGS----VVPFFKKLVQNKASEIPITDIRMTRFWITLDEGVSFVLKSLKRMH  236 (344)
T ss_dssp             HHHHHGGGCCCSSCCEEEEECCCEETTCTTS----HHHHHHHHHHHTCCCEEESCTTCEEEEECHHHHHHHHHHHHHHCC
T ss_pred             HHHHHHHHHhCCCCcEEEEEEeccEECCCCC----HHHHHHHHHHcCCCceEEeCCCeEEeeEEHHHHHHHHHHHHhhcc
Confidence            877766643   5899999999999998753    23333  233454 3  3567788999999999999999998765


Q ss_pred             CCCceEecCCCccCHHHHHHHHHHHhC
Q 018503          274 YRGVINGTAPNPVRLAEMCDHLGNVLG  300 (355)
Q Consensus       274 ~~~~~~i~~~~~~s~~el~~~i~~~~g  300 (355)
                      .+++|++.++ ++++.|+++.+.+.++
T Consensus       237 ~g~~~~~~~~-~~s~~el~~~i~~~~~  262 (344)
T 2gn4_A          237 GGEIFVPKIP-SMKMTDLAKALAPNTP  262 (344)
T ss_dssp             SSCEEEECCC-EEEHHHHHHHHCTTCC
T ss_pred             CCCEEecCCC-cEEHHHHHHHHHHhCC
Confidence            5569988766 6999999999987654

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}

Probab=99.96  E-value=9e-30  Score=214.23  Aligned_cols=205  Identities=15%  Similarity=0.185  Sum_probs=158.0

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecC-CcchhhhcCCCcEEEECCCCCCC
Q 018503           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAE-EPQWRDCIQGSTAVVNLAGTPIG  129 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~~~~~d~vi~~a~~~~~  129 (355)
                      ||||||||||+||++++++|+++|++|++++|++++.... ...   ....+|+.| ++++.++++++|+|||+|+....
T Consensus         1 M~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~-~~~---~~~~~D~~d~~~~~~~~~~~~d~vi~~ag~~~~   76 (219)
T 3dqp_A            1 MKIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQY-NNV---KAVHFDVDWTPEEMAKQLHGMDAIINVSGSGGK   76 (219)
T ss_dssp             CEEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGGSCCC-TTE---EEEECCTTSCHHHHHTTTTTCSEEEECCCCTTS
T ss_pred             CeEEEECCCCHHHHHHHHHHHHCCCEEEEEECCccchhhc-CCc---eEEEecccCCHHHHHHHHcCCCEEEECCcCCCC
Confidence            6899999999999999999999999999999998765433 111   144578999 89999999999999999997421


Q ss_pred             CCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCCCCccccCCCC--CCChh-HHHHHHHHHHHH
Q 018503          130 TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSP--SGNDY-LAEVCREWEGTA  206 (355)
Q Consensus       130 ~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~--~~~~y-~~k~~~~~~~~~  206 (355)
                               ..+++|+.++.++++++++  .+++++|++||.++  ++.   .+..| .+  +...| .+|...|.... 
T Consensus        77 ---------~~~~~n~~~~~~l~~a~~~--~~~~~iv~~SS~~~--~~~---~~~~e-~~~~~~~~Y~~sK~~~e~~~~-  138 (219)
T 3dqp_A           77 ---------SLLKVDLYGAVKLMQAAEK--AEVKRFILLSTIFS--LQP---EKWIG-AGFDALKDYYIAKHFADLYLT-  138 (219)
T ss_dssp             ---------SCCCCCCHHHHHHHHHHHH--TTCCEEEEECCTTT--TCG---GGCCS-HHHHHTHHHHHHHHHHHHHHH-
T ss_pred             ---------CcEeEeHHHHHHHHHHHHH--hCCCEEEEECcccc--cCC---Ccccc-cccccccHHHHHHHHHHHHHH-
Confidence                     2567899999999999999  78899999999765  432   23333 11  13345 56655554443 


Q ss_pred             hccCCCCeEEEEEecEEEeCCCCcccchHHHHHHHhCCCCCCCCcceecccHHHHHHHHHHHHhCCCC-CCceEecCCCc
Q 018503          207 LKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSY-RGVINGTAPNP  285 (355)
Q Consensus       207 ~~~~~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~-~~~~~i~~~~~  285 (355)
                        ...+++++++||+.+||+.......              .++..+++++++|+|++++.++.++.. +++||+++++ 
T Consensus       139 --~~~~i~~~ilrp~~v~g~~~~~~~~--------------~~~~~~~~i~~~Dva~~i~~~l~~~~~~g~~~~i~~g~-  201 (219)
T 3dqp_A          139 --KETNLDYTIIQPGALTEEEATGLID--------------INDEVSASNTIGDVADTIKELVMTDHSIGKVISMHNGK-  201 (219)
T ss_dssp             --HSCCCEEEEEEECSEECSCCCSEEE--------------ESSSCCCCEEHHHHHHHHHHHHTCGGGTTEEEEEEECS-
T ss_pred             --hccCCcEEEEeCceEecCCCCCccc--------------cCCCcCCcccHHHHHHHHHHHHhCccccCcEEEeCCCC-
Confidence              4569999999999999986432211              125668899999999999999998764 5599998875 


Q ss_pred             cCHHHHHHH
Q 018503          286 VRLAEMCDH  294 (355)
Q Consensus       286 ~s~~el~~~  294 (355)
                      .++.|+.+.
T Consensus       202 ~~~~e~~~~  210 (219)
T 3dqp_A          202 TAIKEALES  210 (219)
T ss_dssp             EEHHHHHHT
T ss_pred             ccHHHHHHH
Confidence            999987753

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*

Probab=99.96  E-value=1.1e-28  Score=221.93  Aligned_cols=228  Identities=15%  Similarity=0.154  Sum_probs=163.5

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchh----h---ccC-CCCCCccCCCeeecCCcchhhhcC--CC
Q 018503           48 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKA----E---LIF-PGKKTRFFPGVMIAEEPQWRDCIQ--GS  117 (355)
Q Consensus        48 ~~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~----~---~~~-~~~~~~~~~~~d~~~~~~~~~~~~--~~  117 (355)
                      |++|+||||||||+||++|++.|++.|++|++++|+++..    .   .+. ...   ....+|+.|.+++.++++  ++
T Consensus         8 M~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~l~~~~v---~~~~~Dl~d~~~l~~~~~~~~~   84 (346)
T 3i6i_A            8 SPKGRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIFKALEDKGA---IIVYGLINEQEAMEKILKEHEI   84 (346)
T ss_dssp             ---CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHHHHHHTTC---EEEECCTTCHHHHHHHHHHTTC
T ss_pred             CCCCeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHHHHHHHHhCCc---EEEEeecCCHHHHHHHHhhCCC
Confidence            4457999999999999999999999999999999987221    1   000 111   134578999999999999  99


Q ss_pred             cEEEECCCCCCCCCCChhhHHHHHHHhhhhHHHHHHHHHcCCCC-CCcEEEEeeeeeeeeCCCCCccccCCCCCC--Chh
Q 018503          118 TAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEG-VRPSVLVSATALGYYGTSETEVFDESSPSG--NDY  194 (355)
Q Consensus       118 d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~-~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~--~~y  194 (355)
                      |+|||+++.                .|+.++.+++++|++  .+ +++||+ |   +  ||..    .+|..+..  ..|
T Consensus        85 d~Vi~~a~~----------------~n~~~~~~l~~aa~~--~g~v~~~v~-S---~--~g~~----~~e~~~~~p~~~y  136 (346)
T 3i6i_A           85 DIVVSTVGG----------------ESILDQIALVKAMKA--VGTIKRFLP-S---E--FGHD----VNRADPVEPGLNM  136 (346)
T ss_dssp             CEEEECCCG----------------GGGGGHHHHHHHHHH--HCCCSEEEC-S---C--CSSC----TTTCCCCTTHHHH
T ss_pred             CEEEECCch----------------hhHHHHHHHHHHHHH--cCCceEEee-c---c--cCCC----CCccCcCCCcchH
Confidence            999999984                388999999999998  67 888875 3   2  6632    33433332  334


Q ss_pred             -HHHHHHHHHHHHhccCCCCeEEEEEecEEEeCCCCcccchHHHHHHHhCCC---CCCCCcceecccHHHHHHHHHHHHh
Q 018503          195 -LAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGP---LGSGQQWFSWIHLDDIVNLIYEALS  270 (355)
Q Consensus       195 -~~k~~~~~~~~~~~~~~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~i~v~Dva~~~~~~~~  270 (355)
                       .+|...+...+    ..+++++++||+.++|.........  ......+..   +++++..+++++++|+|++++.++.
T Consensus       137 ~~sK~~~e~~l~----~~g~~~tivrpg~~~g~~~~~~~~~--~~~~~~~~~~~~~g~g~~~~~~i~~~Dva~~~~~~l~  210 (346)
T 3i6i_A          137 YREKRRVRQLVE----ESGIPFTYICCNSIASWPYYNNIHP--SEVLPPTDFFQIYGDGNVKAYFVAGTDIGKFTMKTVD  210 (346)
T ss_dssp             HHHHHHHHHHHH----HTTCCBEEEECCEESSCCCSCC-------CCCCSSCEEEETTSCCCEEEECHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHH----HcCCCEEEEEecccccccCcccccc--ccccCCCceEEEccCCCceEEecCHHHHHHHHHHHHh
Confidence             44544443333    2689999999999999754332111  111112222   2778889999999999999999999


Q ss_pred             CCCC-CCceEecC-CCccCHHHHHHHHHHHhCCCC-CCCCcHHHH
Q 018503          271 NPSY-RGVINGTA-PNPVRLAEMCDHLGNVLGRPS-WLPVPEFAL  312 (355)
Q Consensus       271 ~~~~-~~~~~i~~-~~~~s~~el~~~i~~~~g~~~-~~~~~~~~~  312 (355)
                      .+.. ++.|++++ ++.+|+.|+++.+++.+|++. ...+|....
T Consensus       211 ~~~~~~~~~~i~g~~~~~s~~e~~~~~~~~~g~~~~~~~~~~~~~  255 (346)
T 3i6i_A          211 DVRTLNKSVHFRPSCNCLNINELASVWEKKIGRTLPRVTVTEDDL  255 (346)
T ss_dssp             CGGGTTEEEECCCGGGEECHHHHHHHHHHHHTSCCCEEEECHHHH
T ss_pred             CccccCeEEEEeCCCCCCCHHHHHHHHHHHHCCCCceEecCHHHH
Confidence            8763 56888885 578999999999999999883 334555544

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}

Probab=99.96  E-value=8.9e-29  Score=208.37  Aligned_cols=216  Identities=14%  Similarity=0.131  Sum_probs=139.7

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcCCCcEEEECCCCCCCC
Q 018503           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTPIGT  130 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~~~~~  130 (355)
                      ||||||||||+||++|+++|+++|++|++++|++++...+....   ....+|+.|.+.  +.+.++|+|||+|+.... 
T Consensus         1 MkvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~---~~~~~D~~d~~~--~~~~~~d~vi~~ag~~~~-   74 (221)
T 3ew7_A            1 MKIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQTHKDI---NILQKDIFDLTL--SDLSDQNVVVDAYGISPD-   74 (221)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCSHHHHHHCSSS---EEEECCGGGCCH--HHHTTCSEEEECCCSSTT-
T ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCchhhhhccCCC---eEEeccccChhh--hhhcCCCEEEECCcCCcc-
Confidence            68999999999999999999999999999999987765543211   144578888887  778899999999996321 


Q ss_pred             CCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCCCCccccCCCCC--CChh-HHHHHHHHHHHHh
Q 018503          131 RWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPS--GNDY-LAEVCREWEGTAL  207 (355)
Q Consensus       131 ~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~--~~~y-~~k~~~~~~~~~~  207 (355)
                               ..+.|+.++.++++++++  .+++++|++||.++. |+.....+..|+.+.  ...| .+|...+.+....
T Consensus        75 ---------~~~~~~~~~~~l~~a~~~--~~~~~~v~~SS~~~~-~~~~~~~~~~~~~~~~~~~~y~~~k~~~e~~~~~~  142 (221)
T 3ew7_A           75 ---------EAEKHVTSLDHLISVLNG--TVSPRLLVVGGAASL-QIDEDGNTLLESKGLREAPYYPTARAQAKQLEHLK  142 (221)
T ss_dssp             ---------TTTSHHHHHHHHHHHHCS--CCSSEEEEECCCC--------------------CCCSCCHHHHHHHHHHHH
T ss_pred             ---------ccchHHHHHHHHHHHHHh--cCCceEEEEecceEE-EcCCCCccccccCCCCCHHHHHHHHHHHHHHHHHH
Confidence                     135689999999999999  678999999998763 454433344444442  3446 6777666654333


Q ss_pred             ccCCCCeEEEEEecEEEeCCCCcccchHHHHHHHhCCCCCCCCcceecccHHHHHHHHHHHHhCCCC-CCceEecCCCcc
Q 018503          208 KVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSY-RGVINGTAPNPV  286 (355)
Q Consensus       208 ~~~~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~-~~~~~i~~~~~~  286 (355)
                      ....+++++++||+.+||++... ..+    .. .+..+.......++++++|+|++++.+++++.. ++.||++++.+.
T Consensus       143 ~~~~gi~~~ivrp~~v~g~~~~~-~~~----~~-~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~~g~~~~~~~~~~~  216 (221)
T 3ew7_A          143 SHQAEFSWTYISPSAMFEPGERT-GDY----QI-GKDHLLFGSDGNSFISMEDYAIAVLDEIERPNHLNEHFTVAGKLEH  216 (221)
T ss_dssp             TTTTTSCEEEEECSSCCCCC---------------------------CCCHHHHHHHHHHHHHSCSCTTSEEECCC----
T ss_pred             hhccCccEEEEeCcceecCCCcc-Cce----Ee-ccccceecCCCCceEeHHHHHHHHHHHHhCccccCCEEEECCCCcc
Confidence            32579999999999999984211 111    11 111111011123689999999999999998874 669999998877


Q ss_pred             CHHH
Q 018503          287 RLAE  290 (355)
Q Consensus       287 s~~e  290 (355)
                      +..|
T Consensus       217 ~~~~  220 (221)
T 3ew7_A          217 HHHH  220 (221)
T ss_dssp             ----
T ss_pred             cccc
Confidence            7654

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*

Probab=99.96  E-value=4.8e-29  Score=216.12  Aligned_cols=219  Identities=20%  Similarity=0.229  Sum_probs=175.2

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcCCCcEEEECCCCCCC
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTPIG  129 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~~~~  129 (355)
                      +|+||||||+|+||++|+++|+++|++|++++|+.......  .   .....+|+.|.+++.++++++|+|||+||..  
T Consensus         3 ~k~vlVTGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~--~---~~~~~~Dl~d~~~~~~~~~~~D~vi~~Ag~~--   75 (267)
T 3rft_A            3 MKRLLVTGAAGQLGRVMRERLAPMAEILRLADLSPLDPAGP--N---EECVQCDLADANAVNAMVAGCDGIVHLGGIS--   75 (267)
T ss_dssp             EEEEEEESTTSHHHHHHHHHTGGGEEEEEEEESSCCCCCCT--T---EEEEECCTTCHHHHHHHHTTCSEEEECCSCC--
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCccccCC--C---CEEEEcCCCCHHHHHHHHcCCCEEEECCCCc--
Confidence            46899999999999999999999999999999987654311  1   1144579999999999999999999999973  


Q ss_pred             CCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCC-CCCccccCCCCC--CChh-HHHHHHHHHHH
Q 018503          130 TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGT-SETEVFDESSPS--GNDY-LAEVCREWEGT  205 (355)
Q Consensus       130 ~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~-~~~~~~~e~~~~--~~~y-~~k~~~~~~~~  205 (355)
                         ....+..++++|+.++.++++++++  .+.+++|++||..+  ||. ....+++|+.+.  ...| .+|...+.+..
T Consensus        76 ---~~~~~~~~~~~N~~g~~~l~~a~~~--~~~~~iv~~SS~~~--~g~~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~~  148 (267)
T 3rft_A           76 ---VEKPFEQILQGNIIGLYNLYEAARA--HGQPRIVFASSNHT--IGYYPQTERLGPDVPARPDGLYGVSKCFGENLAR  148 (267)
T ss_dssp             ---SCCCHHHHHHHHTHHHHHHHHHHHH--TTCCEEEEEEEGGG--GTTSBTTSCBCTTSCCCCCSHHHHHHHHHHHHHH
T ss_pred             ---CcCCHHHHHHHHHHHHHHHHHHHHH--cCCCEEEEEcchHH--hCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHH
Confidence               2344678899999999999999998  68899999999988  863 334466776654  3567 88888888887


Q ss_pred             HhccCCCCeEEEEEecEEEeCCCCcccchHHHHHHHhCCCCCCCCcceecccHHHHHHHHHHHHhCCCCC-CceEecCCC
Q 018503          206 ALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYR-GVINGTAPN  284 (355)
Q Consensus       206 ~~~~~~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~~-~~~~i~~~~  284 (355)
                      .+..+.+++++++||+.++|+..                   .++..+++++++|+++++..++..+... .++++.+++
T Consensus       149 ~~a~~~g~~~~~vr~~~v~~~~~-------------------~~~~~~~~~~~~d~a~~~~~~~~~~~~~~~~~~~~s~~  209 (267)
T 3rft_A          149 MYFDKFGQETALVRIGSCTPEPN-------------------NYRMLSTWFSHDDFVSLIEAVFRAPVLGCPVVWGASAN  209 (267)
T ss_dssp             HHHHHHCCCEEEEEECBCSSSCC-------------------STTHHHHBCCHHHHHHHHHHHHHCSCCCSCEEEECCCC
T ss_pred             HHHHHhCCeEEEEEeecccCCCC-------------------CCCceeeEEcHHHHHHHHHHHHhCCCCCceEEEEeCCC
Confidence            77766799999999999998732                   2344567899999999999999987644 478888888


Q ss_pred             ccCHHHHHHHHHHHhCCCC
Q 018503          285 PVRLAEMCDHLGNVLGRPS  303 (355)
Q Consensus       285 ~~s~~el~~~i~~~~g~~~  303 (355)
                      +.++.++...  +.+|..+
T Consensus       210 ~~~~~~~~~~--~~~g~~p  226 (267)
T 3rft_A          210 DAGWWDNSHL--GFLGWKP  226 (267)
T ss_dssp             TTCCBCCGGG--GGGCCCC
T ss_pred             CCCcccChhH--HHCCCCC
Confidence            8888776444  6677653

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}

Probab=99.96  E-value=4.2e-29  Score=212.59  Aligned_cols=214  Identities=15%  Similarity=0.167  Sum_probs=159.4

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcCCCcEEEECCCCC
Q 018503           48 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTP  127 (355)
Q Consensus        48 ~~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~~  127 (355)
                      .++|+||||||||+||++++++|+++|++|++++|+++....+..... .....+|+.  +.+.++++++|+|||+||..
T Consensus        19 l~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~~-~~~~~~Dl~--~~~~~~~~~~D~vi~~ag~~   95 (236)
T 3e8x_A           19 FQGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPELRERGA-SDIVVANLE--EDFSHAFASIDAVVFAAGSG   95 (236)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHTTC-SEEEECCTT--SCCGGGGTTCSEEEECCCCC
T ss_pred             cCCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChHHHHHHHhCCC-ceEEEcccH--HHHHHHHcCCCEEEECCCCC
Confidence            346899999999999999999999999999999999876554322110 003345776  78888899999999999964


Q ss_pred             CCCCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCCCCccccCCC-CCCChh-HHHHHHHHHHH
Q 018503          128 IGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESS-PSGNDY-LAEVCREWEGT  205 (355)
Q Consensus       128 ~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~-~~~~~y-~~k~~~~~~~~  205 (355)
                      .     ...+...+++|+.++.++++++++  .++++||++||.+.  +.   .    +.. ++...| .+|...+.+..
T Consensus        96 ~-----~~~~~~~~~~n~~~~~~l~~a~~~--~~~~~iv~~SS~~~--~~---~----~~~~~~~~~Y~~sK~~~e~~~~  159 (236)
T 3e8x_A           96 P-----HTGADKTILIDLWGAIKTIQEAEK--RGIKRFIMVSSVGT--VD---P----DQGPMNMRHYLVAKRLADDELK  159 (236)
T ss_dssp             T-----TSCHHHHHHTTTHHHHHHHHHHHH--HTCCEEEEECCTTC--SC---G----GGSCGGGHHHHHHHHHHHHHHH
T ss_pred             C-----CCCccccchhhHHHHHHHHHHHHH--cCCCEEEEEecCCC--CC---C----CCChhhhhhHHHHHHHHHHHHH
Confidence            2     245678899999999999999998  68899999999543  22   1    111 233456 66655554433


Q ss_pred             HhccCCCCeEEEEEecEEEeCCCCcccchHHHHHHHhCCCCCCCCcceecccHHHHHHHHHHHHhCCC-CCCceEecCCC
Q 018503          206 ALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPS-YRGVINGTAPN  284 (355)
Q Consensus       206 ~~~~~~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~-~~~~~~i~~~~  284 (355)
                          ..+++++++||+.++|+.........           ..++..+++++++|+|++++.++.++. .+++|+++++ 
T Consensus       160 ----~~gi~~~~lrpg~v~~~~~~~~~~~~-----------~~~~~~~~~i~~~Dva~~~~~~~~~~~~~g~~~~v~~~-  223 (236)
T 3e8x_A          160 ----RSSLDYTIVRPGPLSNEESTGKVTVS-----------PHFSEITRSITRHDVAKVIAELVDQQHTIGKTFEVLNG-  223 (236)
T ss_dssp             ----HSSSEEEEEEECSEECSCCCSEEEEE-----------SSCSCCCCCEEHHHHHHHHHHHTTCGGGTTEEEEEEEC-
T ss_pred             ----HCCCCEEEEeCCcccCCCCCCeEEec-----------cCCCcccCcEeHHHHHHHHHHHhcCccccCCeEEEeCC-
Confidence                46999999999999998643221111           123446789999999999999999875 4569999888 


Q ss_pred             ccCHHHHHHHHH
Q 018503          285 PVRLAEMCDHLG  296 (355)
Q Consensus       285 ~~s~~el~~~i~  296 (355)
                      ++++.|+++.++
T Consensus       224 ~~~~~e~~~~i~  235 (236)
T 3e8x_A          224 DTPIAKVVEQLG  235 (236)
T ss_dssp             SEEHHHHHHTC-
T ss_pred             CcCHHHHHHHhc
Confidence            499999998765

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}

Probab=99.96  E-value=2.9e-28  Score=205.71  Aligned_cols=216  Identities=18%  Similarity=0.137  Sum_probs=153.4

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcCCCcEEEECCCCCCCC
Q 018503           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTPIGT  130 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~~~~~  130 (355)
                      ||||||||||+||++|+++|+++|++|++++|++++...+.....  ....+|+.|.+.  +.+.++|+|||+|+..   
T Consensus         1 MkilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~--~~~~~D~~d~~~--~~~~~~d~vi~~ag~~---   73 (224)
T 3h2s_A            1 MKIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKAADRLGATV--ATLVKEPLVLTE--ADLDSVDAVVDALSVP---   73 (224)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHTCTTS--EEEECCGGGCCH--HHHTTCSEEEECCCCC---
T ss_pred             CEEEEEcCCCHHHHHHHHHHHHCCCEEEEEEecccccccccCCCc--eEEecccccccH--hhcccCCEEEECCccC---
Confidence            689999999999999999999999999999999877654432211  134578888887  7788999999999974   


Q ss_pred             CCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCCCC--ccccCCCCC--CChh-HHHHHHHHHHH
Q 018503          131 RWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSET--EVFDESSPS--GNDY-LAEVCREWEGT  205 (355)
Q Consensus       131 ~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~~--~~~~e~~~~--~~~y-~~k~~~~~~~~  205 (355)
                       |...    ....|+.++.++++++++  .+ +++|++||.++. |+....  .+.++...+  ...| .+|...+.+ .
T Consensus        74 -~~~~----~~~~n~~~~~~l~~a~~~--~~-~~~v~~SS~~~~-~~~~~~~~~~~~~~~~~~~~~~y~~sK~~~e~~-~  143 (224)
T 3h2s_A           74 -WGSG----RGYLHLDFATHLVSLLRN--SD-TLAVFILGSASL-AMPGADHPMILDFPESAASQPWYDGALYQYYEY-Q  143 (224)
T ss_dssp             -TTSS----CTHHHHHHHHHHHHTCTT--CC-CEEEEECCGGGS-BCTTCSSCGGGGCCGGGGGSTTHHHHHHHHHHH-H
T ss_pred             -CCcc----hhhHHHHHHHHHHHHHHH--cC-CcEEEEecceee-ccCCCCccccccCCCCCccchhhHHHHHHHHHH-H
Confidence             1111    135799999999999999  67 899999998662 433222  244444444  4556 677666643 3


Q ss_pred             HhccCCCCeEEEEEecEEEeCCCCcccchHHHHHHHhCCCCCCCCcceecccHHHHHHHHHHHHhCCC-CCCceEecCCC
Q 018503          206 ALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPS-YRGVINGTAPN  284 (355)
Q Consensus       206 ~~~~~~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~-~~~~~~i~~~~  284 (355)
                      .+....+++++++||+.+||++....  +.     .....+..++..+++++++|+|++++.+++++. .+++|++++.+
T Consensus       144 ~~~~~~~i~~~ivrp~~v~g~~~~~~--~~-----~~~~~~~~~~~~~~~i~~~DvA~~~~~~l~~~~~~g~~~~~~~~~  216 (224)
T 3h2s_A          144 FLQMNANVNWIGISPSEAFPSGPATS--YV-----AGKDTLLVGEDGQSHITTGNMALAILDQLEHPTAIRDRIVVRDAD  216 (224)
T ss_dssp             HHTTCTTSCEEEEEECSBCCCCCCCC--EE-----EESSBCCCCTTSCCBCCHHHHHHHHHHHHHSCCCTTSEEEEEECC
T ss_pred             HHHhcCCCcEEEEcCccccCCCcccC--ce-----ecccccccCCCCCceEeHHHHHHHHHHHhcCccccCCEEEEecCc
Confidence            34445799999999999999843211  11     011222234455789999999999999999887 46699999877


Q ss_pred             ccCHHH
Q 018503          285 PVRLAE  290 (355)
Q Consensus       285 ~~s~~e  290 (355)
                      +.++.|
T Consensus       217 ~~~~~~  222 (224)
T 3h2s_A          217 LEHHHH  222 (224)
T ss_dssp             ------
T ss_pred             chhccc
Confidence            666554

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A

Probab=99.96  E-value=2.9e-29  Score=221.26  Aligned_cols=270  Identities=14%  Similarity=0.028  Sum_probs=185.5

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCC-CeEEEEecCCchhh--ccCCCCCCccCCCeeecCCcchhhhcCCCcEEEECCCC
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADN-HQVRVLTRSRSKAE--LIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT  126 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~--~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~  126 (355)
                      +|+||||||||++|++++++|+++| ++|++++|++++..  .+.....  ....+|+.|++++.++++++|+|||+++.
T Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~~~~~l~~~~~--~~~~~D~~d~~~l~~~~~~~d~vi~~a~~   82 (299)
T 2wm3_A            5 KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAAKELRLQGA--EVVQGDQDDQVIMELALNGAYATFIVTNY   82 (299)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSHHHHHHHHTTC--EEEECCTTCHHHHHHHHTTCSEEEECCCH
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCCCHHHHHHHHCCC--EEEEecCCCHHHHHHHHhcCCEEEEeCCC
Confidence            4799999999999999999999998 99999999876531  1111100  13457899999999999999999999974


Q ss_pred             CCCCCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCChh-HHHHHHHHHHH
Q 018503          127 PIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-LAEVCREWEGT  205 (355)
Q Consensus       127 ~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~~y-~~k~~~~~~~~  205 (355)
                      ..  .       ...+.|+.++.++++++++  .++++||++|+.++  |+..      +. .+...| .+|...|....
T Consensus        83 ~~--~-------~~~~~~~~~~~~~~~aa~~--~gv~~iv~~S~~~~--~~~~------~~-~~~~~y~~sK~~~e~~~~  142 (299)
T 2wm3_A           83 WE--S-------CSQEQEVKQGKLLADLARR--LGLHYVVYSGLENI--KKLT------AG-RLAAAHFDGKGEVEEYFR  142 (299)
T ss_dssp             HH--H-------TCHHHHHHHHHHHHHHHHH--HTCSEEEECCCCCH--HHHT------TT-SCCCHHHHHHHHHHHHHH
T ss_pred             Cc--c-------ccchHHHHHHHHHHHHHHH--cCCCEEEEEcCccc--cccC------CC-cccCchhhHHHHHHHHHH
Confidence            20  0       0134678899999999998  78999999877665  5421      11 123455 56655554433


Q ss_pred             HhccCCCCeEEEEEecEEEeCCCCcccchHHHHHHHhCC----CCCCCCcceecccHHHHHHHHHHHHhCCC--CCCceE
Q 018503          206 ALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGG----PLGSGQQWFSWIHLDDIVNLIYEALSNPS--YRGVIN  279 (355)
Q Consensus       206 ~~~~~~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~i~v~Dva~~~~~~~~~~~--~~~~~~  279 (355)
                          ..+++++++||+.+||+....+   .+. ....+.    .+..++..+++++++|+|++++.++..+.  .++.|+
T Consensus       143 ----~~gi~~~ilrp~~~~~~~~~~~---~~~-~~~~g~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~~~g~~~~  214 (299)
T 2wm3_A          143 ----DIGVPMTSVRLPCYFENLLSHF---LPQ-KAPDGKSYLLSLPTGDVPMDGMSVSDLGPVVLSLLKMPEKYVGQNIG  214 (299)
T ss_dssp             ----HHTCCEEEEECCEEGGGGGTTT---CCE-ECTTSSSEEECCCCTTSCEEEECGGGHHHHHHHHHHSHHHHTTCEEE
T ss_pred             ----HCCCCEEEEeecHHhhhchhhc---CCc-ccCCCCEEEEEecCCCCccceecHHHHHHHHHHHHcChhhhCCeEEE
Confidence                2489999999999999743211   100 001221    12346778999999999999999998752  456899


Q ss_pred             ecCCCccCHHHHHHHHHHHhCCC-CCCCCcHHHHHHHhccc--------ceeeecCccccchhHHhCCCCCCccCHHHHH
Q 018503          280 GTAPNPVRLAEMCDHLGNVLGRP-SWLPVPEFALKAVLGEG--------AFVVLEGQRVVPARAKELGFPFKYRYVKDAL  350 (355)
Q Consensus       280 i~~~~~~s~~el~~~i~~~~g~~-~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~k~~~lG~~p~~~~~~~~l  350 (355)
                      +++ +.+|+.|+++.+.+.+|++ ...++|.+..... +.+        ..++......+.+..+.+|..|+  ++++.+
T Consensus       215 ~~g-~~~s~~e~~~~~~~~~g~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~  290 (299)
T 2wm3_A          215 LST-CRHTAEEYAALLTKHTRKVVHDAKMTPEDYEKL-GFPGARDLANMFRFYALRPDRDIELTLRLNPKAL--TLDQWL  290 (299)
T ss_dssp             CCS-EEECHHHHHHHHHHHHSSCEEECCCCTHHHHTT-CSTTHHHHHHHHHHHTTCCCCCHHHHHHHCTTCC--CHHHHH
T ss_pred             eee-ccCCHHHHHHHHHHHHCCCceeEecCHHHHHhc-CCCcHHHHHHHHHHHHhcCCCCHHHHHHhCCCCC--CHHHHH
Confidence            986 6799999999999999988 4456665554321 111        01111111112222356898887  799999


Q ss_pred             HHH
Q 018503          351 KAI  353 (355)
Q Consensus       351 ~~~  353 (355)
                      ++.
T Consensus       291 ~~~  293 (299)
T 2wm3_A          291 EQH  293 (299)
T ss_dssp             HHH
T ss_pred             HhC
Confidence            875

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*

Probab=99.95  E-value=2.6e-28  Score=209.72  Aligned_cols=231  Identities=18%  Similarity=0.113  Sum_probs=163.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhC--CCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcCCCcEEEECCCC
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQAD--NHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT  126 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~  126 (355)
                      ++|+||||||+|+||++++++|+++  |++|++++|++++...+....   ....+|+.|.+++.++++++|+|||+|+.
T Consensus         3 ~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~~~~~~~~~---~~~~~D~~d~~~~~~~~~~~d~vi~~a~~   79 (253)
T 1xq6_A            3 NLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIGGEA---DVFIGDITDADSINPAFQGIDALVILTSA   79 (253)
T ss_dssp             SCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHHHHHTTCCT---TEEECCTTSHHHHHHHHTTCSEEEECCCC
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCchhhcCCCe---eEEEecCCCHHHHHHHHcCCCEEEEeccc
Confidence            4579999999999999999999999  899999999876554432111   14457999999999999999999999996


Q ss_pred             CCCCC----------C--ChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCChh
Q 018503          127 PIGTR----------W--SSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY  194 (355)
Q Consensus       127 ~~~~~----------~--~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~~y  194 (355)
                      .....          .  ..+.....+++|+.++.++++++++  .+++++|++||.++  +..  ..+....  ....|
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~--~~~~~iv~~SS~~~--~~~--~~~~~~~--~~~~y  151 (253)
T 1xq6_A           80 VPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKV--AGVKHIVVVGSMGG--TNP--DHPLNKL--GNGNI  151 (253)
T ss_dssp             CCEECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHHH--HTCSEEEEEEETTT--TCT--TCGGGGG--GGCCH
T ss_pred             cccccccccccccccchhhccccccceeeeHHHHHHHHHHHHH--cCCCEEEEEcCccC--CCC--CCccccc--cchhH
Confidence            42110          0  0111124678999999999999998  67889999999876  421  1111100  01234


Q ss_pred             -HHHHHHHHHHHHhccCCCCeEEEEEecEEEeCCCCcccchHHHHHHHhCCCCCCCCcceecccHHHHHHHHHHHHhCCC
Q 018503          195 -LAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPS  273 (355)
Q Consensus       195 -~~k~~~~~~~~~~~~~~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~  273 (355)
                       .+|...|.+..    ..+++++++||+.+||+.......+..     ....+.  ....++++++|+|++++.++.++.
T Consensus       152 ~~sK~~~e~~~~----~~~i~~~~vrpg~v~~~~~~~~~~~~~-----~~~~~~--~~~~~~~~~~Dva~~~~~~~~~~~  220 (253)
T 1xq6_A          152 LVWKRKAEQYLA----DSGTPYTIIRAGGLLDKEGGVRELLVG-----KDDELL--QTDTKTVPRADVAEVCIQALLFEE  220 (253)
T ss_dssp             HHHHHHHHHHHH----TSSSCEEEEEECEEECSCSSSSCEEEE-----STTGGG--GSSCCEEEHHHHHHHHHHHTTCGG
T ss_pred             HHHHHHHHHHHH----hCCCceEEEecceeecCCcchhhhhcc-----CCcCCc--CCCCcEEcHHHHHHHHHHHHcCcc
Confidence             45655444332    368999999999999986432111100     001111  112468999999999999999865


Q ss_pred             C-CCceEecCCC---ccCHHHHHHHHHHHhCC
Q 018503          274 Y-RGVINGTAPN---PVRLAEMCDHLGNVLGR  301 (355)
Q Consensus       274 ~-~~~~~i~~~~---~~s~~el~~~i~~~~g~  301 (355)
                      . +++||+++++   ++|+.|+++.+++.+|+
T Consensus       221 ~~g~~~~i~~~~~~~~~s~~e~~~~~~~~~g~  252 (253)
T 1xq6_A          221 AKNKAFDLGSKPEGTSTPTKDFKALFSQVTSR  252 (253)
T ss_dssp             GTTEEEEEEECCTTTSCCCCCHHHHHHTCCCC
T ss_pred             ccCCEEEecCCCcCCCCCHHHHHHHHHHHhCC
Confidence            3 5599999864   69999999999999886

>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.94  E-value=2.6e-27  Score=198.48  Aligned_cols=205  Identities=18%  Similarity=0.143  Sum_probs=151.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCC--eEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcCCCcEEEECCCC
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNH--QVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT  126 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~  126 (355)
                      ++|+|+||||+|+||++++++|+++|+  +|++++|++...   ...   .....+|+.|.+++.+++  +|+|||+|+.
T Consensus         4 ~~~~vlVtGatG~iG~~l~~~l~~~g~~~~V~~~~r~~~~~---~~~---~~~~~~D~~~~~~~~~~~--~d~vi~~a~~   75 (215)
T 2a35_A            4 TPKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALAE---HPR---LDNPVGPLAELLPQLDGS--IDTAFCCLGT   75 (215)
T ss_dssp             CCCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCCC---CTT---EECCBSCHHHHGGGCCSC--CSEEEECCCC
T ss_pred             CCceEEEECCCcHHHHHHHHHHHhCCCCCeEEEEeCCCccc---CCC---ceEEeccccCHHHHHHhh--hcEEEECeee
Confidence            457999999999999999999999998  999999987651   111   013456888888888887  9999999986


Q ss_pred             CCCCCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCChh-HHHHHHHHHHH
Q 018503          127 PIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-LAEVCREWEGT  205 (355)
Q Consensus       127 ~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~~y-~~k~~~~~~~~  205 (355)
                      ...   ....+...+++|+.++.++++++++  .+++++|++||.++  |+.           +...| .+|...|....
T Consensus        76 ~~~---~~~~~~~~~~~n~~~~~~l~~~~~~--~~~~~~v~~Ss~~~--~~~-----------~~~~y~~sK~~~e~~~~  137 (215)
T 2a35_A           76 TIK---EAGSEEAFRAVDFDLPLAVGKRALE--MGARHYLVVSALGA--DAK-----------SSIFYNRVKGELEQALQ  137 (215)
T ss_dssp             CHH---HHSSHHHHHHHHTHHHHHHHHHHHH--TTCCEEEEECCTTC--CTT-----------CSSHHHHHHHHHHHHHT
T ss_pred             ccc---cCCCHHHHHHhhHHHHHHHHHHHHH--cCCCEEEEECCccc--CCC-----------CccHHHHHHHHHHHHHH
Confidence            321   2345678889999999999999998  68889999999887  652           23456 55554444332


Q ss_pred             HhccCCCCe-EEEEEecEEEeCCCCcccchHHHHHHHhCCCCCCCCcceecccHHHHHHHHHHHHhCCCCCCceEecCCC
Q 018503          206 ALKVNKDVR-LALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRGVINGTAPN  284 (355)
Q Consensus       206 ~~~~~~~~~-~~i~Rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~~~~~~i~~~~  284 (355)
                          ..+++ ++++||+.+||+....  .+...+. ....++..  ..++++|++|+|++++.++.++. +++||+++++
T Consensus       138 ----~~~~~~~~~vrp~~v~g~~~~~--~~~~~~~-~~~~~~~~--~~~~~i~~~Dva~~~~~~~~~~~-~~~~~i~~~~  207 (215)
T 2a35_A          138 ----EQGWPQLTIARPSLLFGPREEF--RLAEILA-APIARILP--GKYHGIEACDLARALWRLALEEG-KGVRFVESDE  207 (215)
T ss_dssp             ----TSCCSEEEEEECCSEESTTSCE--EGGGGTT-CCCC------CHHHHHHHHHHHHHHHHHHTCCC-SEEEEEEHHH
T ss_pred             ----HcCCCeEEEEeCceeeCCCCcc--hHHHHHH-HhhhhccC--CCcCcEeHHHHHHHHHHHHhcCC-CCceEEcHHH
Confidence                24898 9999999999997542  1221111 01111222  26789999999999999999875 7899999877


Q ss_pred             ccCHH
Q 018503          285 PVRLA  289 (355)
Q Consensus       285 ~~s~~  289 (355)
                      ++++.
T Consensus       208 ~~~~~  212 (215)
T 2a35_A          208 LRKLG  212 (215)
T ss_dssp             HHHHH
T ss_pred             HHHhh
Confidence            65543

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2

Probab=99.94  E-value=3.9e-27  Score=208.94  Aligned_cols=236  Identities=16%  Similarity=0.216  Sum_probs=161.9

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCch-----hhc---cCCCCCCccCCCeeecCCcchhhhcCCCcEEE
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSK-----AEL---IFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVV  121 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~-----~~~---~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi  121 (355)
                      +|+|+||||||++|++++++|++.|++|++++|+.+.     ...   +....  .....+|+.|++++.++++++|+||
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~--~~~~~~D~~d~~~l~~~~~~~d~vi   81 (313)
T 1qyd_A            4 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLG--AKLIEASLDDHQRLVDALKQVDVVI   81 (313)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTTT--CEEECCCSSCHHHHHHHHTTCSEEE
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhHHHHHHHHHhCC--eEEEeCCCCCHHHHHHHHhCCCEEE
Confidence            4789999999999999999999999999999998642     111   11111  0134579999999999999999999


Q ss_pred             ECCCCCCCCCCChhhHHHHHHHhhhhHHHHHHHHHcCCCC-CCcEEEEeeeeeeeeCCCCCccccCCCCCCChhHHHHHH
Q 018503          122 NLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEG-VRPSVLVSATALGYYGTSETEVFDESSPSGNDYLAEVCR  200 (355)
Q Consensus       122 ~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~-~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~~y~~k~~~  200 (355)
                      |+++....            ..|+.++.++++++++  .+ +++||+ |   +  ||.....+.....+..+.|.+|...
T Consensus        82 ~~a~~~~~------------~~~~~~~~~l~~aa~~--~g~v~~~v~-S---~--~g~~~~~~~~~~~p~~~~y~sK~~~  141 (313)
T 1qyd_A           82 SALAGGVL------------SHHILEQLKLVEAIKE--AGNIKRFLP-S---E--FGMDPDIMEHALQPGSITFIDKRKV  141 (313)
T ss_dssp             ECCCCSSS------------STTTTTHHHHHHHHHH--SCCCSEEEC-S---C--CSSCTTSCCCCCSSTTHHHHHHHHH
T ss_pred             ECCccccc------------hhhHHHHHHHHHHHHh--cCCCceEEe-c---C--CcCCccccccCCCCCcchHHHHHHH
Confidence            99986421            1378889999999999  67 899875 3   2  6633222101111112345455444


Q ss_pred             HHHHHHhccCCCCeEEEEEecEEEeCCCCcccchHHHHHHHhCC---CCCCCCcceecccHHHHHHHHHHHHhCCC-CCC
Q 018503          201 EWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGG---PLGSGQQWFSWIHLDDIVNLIYEALSNPS-YRG  276 (355)
Q Consensus       201 ~~~~~~~~~~~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~i~v~Dva~~~~~~~~~~~-~~~  276 (355)
                      |...    ...+++++++||+.++|+....+..... .....+.   .+++++..+++++++|+|++++.++.++. .++
T Consensus       142 e~~~----~~~g~~~~ilrp~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~l~~~~~~~~  216 (313)
T 1qyd_A          142 RRAI----EAASIPYTYVSSNMFAGYFAGSLAQLDG-HMMPPRDKVLIYGDGNVKGIWVDEDDVGTYTIKSIDDPQTLNK  216 (313)
T ss_dssp             HHHH----HHTTCCBCEEECCEEHHHHTTTSSCTTC-CSSCCSSEECCBTTSCSEEEEECHHHHHHHHHHHTTCGGGSSS
T ss_pred             HHHH----HhcCCCeEEEEeceeccccccccccccc-cccCCCCeEEEeCCCCceEEEEEHHHHHHHHHHHHhCcccCCc
Confidence            3333    2358999999999998853221111000 0001111   12567888999999999999999998765 355


Q ss_pred             ceEecCC-CccCHHHHHHHHHHHhCCCC-CCCCcHHHH
Q 018503          277 VINGTAP-NPVRLAEMCDHLGNVLGRPS-WLPVPEFAL  312 (355)
Q Consensus       277 ~~~i~~~-~~~s~~el~~~i~~~~g~~~-~~~~~~~~~  312 (355)
                      .|++.++ +.+|+.|+++.+++.+|++. ...+|....
T Consensus       217 ~~~~~g~~~~~s~~e~~~~~~~~~g~~~~~~~~~~~~~  254 (313)
T 1qyd_A          217 TMYIRPPMNILSQKEVIQIWERLSEQNLDKIYISSQDF  254 (313)
T ss_dssp             EEECCCGGGEEEHHHHHHHHHHHHTCCCEECCBCSHHH
T ss_pred             eEEEeCCCCccCHHHHHHHHHHhcCCCCceEECCHHHH
Confidence            7888764 78999999999999999873 345554333

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*

Probab=99.94  E-value=1.5e-25  Score=186.42  Aligned_cols=199  Identities=15%  Similarity=0.106  Sum_probs=142.7

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcCCCcEEEECCCCCCCC
Q 018503           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTPIGT  130 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~~~~~  130 (355)
                      |+|+||||||+||++++++|+++|++|++++|++++........  .....+|+.|++++.++++++|+|||+|+.....
T Consensus         4 ~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~--~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~~~~~   81 (206)
T 1hdo_A            4 KKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEGPRP--AHVVVGDVLQAADVDKTVAGQDAVIVLLGTRNDL   81 (206)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSSSCCC--SEEEESCTTSHHHHHHHHTTCSEEEECCCCTTCC
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChhhcccccCCc--eEEEEecCCCHHHHHHHHcCCCEEEECccCCCCC
Confidence            79999999999999999999999999999999876644321111  1134568889999999999999999999864321


Q ss_pred             CCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCChh-HHHHHHHHHHHHhcc
Q 018503          131 RWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-LAEVCREWEGTALKV  209 (355)
Q Consensus       131 ~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~~y-~~k~~~~~~~~~~~~  209 (355)
                      .        ..++|+.++.++++++++  .+++++|++||.++  |+.....+.     +...| .+|...+...    .
T Consensus        82 ~--------~~~~n~~~~~~~~~~~~~--~~~~~~v~~Ss~~~--~~~~~~~~~-----~~~~y~~~K~~~e~~~----~  140 (206)
T 1hdo_A           82 S--------PTTVMSEGARNIVAAMKA--HGVDKVVACTSAFL--LWDPTKVPP-----RLQAVTDDHIRMHKVL----R  140 (206)
T ss_dssp             S--------CCCHHHHHHHHHHHHHHH--HTCCEEEEECCGGG--TSCTTCSCG-----GGHHHHHHHHHHHHHH----H
T ss_pred             C--------ccchHHHHHHHHHHHHHH--hCCCeEEEEeeeee--ccCcccccc-----cchhHHHHHHHHHHHH----H
Confidence            1        124789999999999998  68899999999987  764322111     22345 5554444433    2


Q ss_pred             CCCCeEEEEEecEEEeC-CCCcccchHHHHHHHhCCCCCCCCcceecccHHHHHHHHHHHHhCCCC-CCceEecCCC
Q 018503          210 NKDVRLALIRIGIVLGK-DGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSY-RGVINGTAPN  284 (355)
Q Consensus       210 ~~~~~~~i~Rp~~i~G~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~-~~~~~i~~~~  284 (355)
                      ..+++++++||+.++.. ..+.+....      .+    .+.  .++++++|+|++++.+++++.. ++.|++++++
T Consensus       141 ~~~i~~~~lrp~~~~~~~~~~~~~~~~------~~----~~~--~~~i~~~Dva~~~~~~~~~~~~~g~~~~i~~g~  205 (206)
T 1hdo_A          141 ESGLKYVAVMPPHIGDQPLTGAYTVTL------DG----RGP--SRVISKHDLGHFMLRCLTTDEYDGHSTYPSHQY  205 (206)
T ss_dssp             HTCSEEEEECCSEEECCCCCSCCEEES------SS----CSS--CSEEEHHHHHHHHHHTTSCSTTTTCEEEEECCC
T ss_pred             hCCCCEEEEeCCcccCCCCCcceEecc------cC----CCC--CCccCHHHHHHHHHHHhcCccccccceeeeccc
Confidence            36899999999998322 112111100      01    110  4799999999999999998764 5599999875

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*

Probab=99.93  E-value=3.2e-26  Score=205.94  Aligned_cols=227  Identities=15%  Similarity=0.174  Sum_probs=160.7

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchh--hccCCCCCCccCCCee-ecCCcchhhhcCCCcEEEECCCC
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKA--ELIFPGKKTRFFPGVM-IAEEPQWRDCIQGSTAVVNLAGT  126 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~--~~~~~~~~~~~~~~~d-~~~~~~~~~~~~~~d~vi~~a~~  126 (355)
                      +|+|+||||||+||++|++.|+++|++|++++|+.+..  ..+..... .....+| +.|++++.++++++|+|||+++.
T Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~l~~~~~-v~~v~~D~l~d~~~l~~~~~~~d~Vi~~a~~   83 (352)
T 1xgk_A            5 KKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQAIPN-VTLFQGPLLNNVPLMDTLFEGAHLAFINTTS   83 (352)
T ss_dssp             CCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHHHHHHTSTT-EEEEESCCTTCHHHHHHHHTTCSEEEECCCS
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCChhhHHHHhhcCC-cEEEECCccCCHHHHHHHHhcCCEEEEcCCC
Confidence            57899999999999999999999999999999987653  21211000 0133468 88999999999999999999874


Q ss_pred             CCCCCCChhhHHHHHHHhhhhHHHHHHHHHcCCCC-CCcEEEEeeeeeeeeCCCCCccccCCCCCCChh-HHHHHHHHHH
Q 018503          127 PIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEG-VRPSVLVSATALGYYGTSETEVFDESSPSGNDY-LAEVCREWEG  204 (355)
Q Consensus       127 ~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~-~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~~y-~~k~~~~~~~  204 (355)
                      .     ..       +.|..+ +++++++++  .+ +++|||+||.....|+.          ++...| .+|...|...
T Consensus        84 ~-----~~-------~~~~~~-~~l~~aa~~--~g~v~~~V~~SS~~~~~~~~----------~~~~~y~~sK~~~E~~~  138 (352)
T 1xgk_A           84 Q-----AG-------DEIAIG-KDLADAAKR--AGTIQHYIYSSMPDHSLYGP----------WPAVPMWAPKFTVENYV  138 (352)
T ss_dssp             T-----TS-------CHHHHH-HHHHHHHHH--HSCCSEEEEEECCCGGGTSS----------CCCCTTTHHHHHHHHHH
T ss_pred             C-----Cc-------HHHHHH-HHHHHHHHH--cCCccEEEEeCCccccccCC----------CCCccHHHHHHHHHHHH
Confidence            2     11       235555 899999988  67 89999999975211331          122345 6776555544


Q ss_pred             HHhccCCCCeEEEEEecEEEeCCCCcc-cchHHHHHHHhCCC----CCCCCcceecccH-HHHHHHHHHHHhCCC---CC
Q 018503          205 TALKVNKDVRLALIRIGIVLGKDGGAL-AKMIPLFMMFAGGP----LGSGQQWFSWIHL-DDIVNLIYEALSNPS---YR  275 (355)
Q Consensus       205 ~~~~~~~~~~~~i~Rp~~i~G~~~~~~-~~~~~~~~~~~~~~----~~~~~~~~~~i~v-~Dva~~~~~~~~~~~---~~  275 (355)
                      ..    .+++++++||+ +||++.... ..+........+..    .+.++..++++|+ +|+|++++.++.++.   .+
T Consensus       139 ~~----~gi~~~ivrpg-~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~v~~Dva~ai~~~l~~~~~~~~g  213 (352)
T 1xgk_A          139 RQ----LGLPSTFVYAG-IYNNNFTSLPYPLFQMELMPDGTFEWHAPFDPDIPLPWLDAEHDVGPALLQIFKDGPQKWNG  213 (352)
T ss_dssp             HT----SSSCEEEEEEC-EEGGGCBSSSCSSCBEEECTTSCEEEEESSCTTSCEEEECHHHHHHHHHHHHHHHCHHHHTT
T ss_pred             HH----cCCCEEEEecc-eecCCchhcccccccccccCCCceEEeeccCCCCceeeEecHHHHHHHHHHHHhCCchhhCC
Confidence            32    48999999987 688754211 00100000112321    2457788999999 899999999998752   46


Q ss_pred             CceEecCCCccCHHHHHHHHHHHhCCC-CCCCCc
Q 018503          276 GVINGTAPNPVRLAEMCDHLGNVLGRP-SWLPVP  308 (355)
Q Consensus       276 ~~~~i~~~~~~s~~el~~~i~~~~g~~-~~~~~~  308 (355)
                      ++||+++ +++|+.|+++.+.+.+|++ ...++|
T Consensus       214 ~~~~l~~-~~~s~~e~~~~i~~~~G~~~~~~~vp  246 (352)
T 1xgk_A          214 HRIALTF-ETLSPVQVCAAFSRALNRRVTYVQVP  246 (352)
T ss_dssp             CEEEECS-EEECHHHHHHHHHHHHTSCEEEEECS
T ss_pred             eEEEEec-CCCCHHHHHHHHHHHHCCCCceEECC
Confidence            7999995 6799999999999999987 333444

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A

Probab=99.93  E-value=7.5e-25  Score=186.98  Aligned_cols=205  Identities=15%  Similarity=0.090  Sum_probs=148.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCC--eEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcCCCcEEEECCCC
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNH--QVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT  126 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~  126 (355)
                      ++|+|+||||+|+||++++++|+++|+  +|++++|+++.........  .....+|+.|++++.++++++|+|||+||.
T Consensus        17 ~~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~~~~~~--~~~~~~D~~d~~~~~~~~~~~d~vi~~ag~   94 (242)
T 2bka_A           17 QNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYKN--VNQEVVDFEKLDDYASAFQGHDVGFCCLGT   94 (242)
T ss_dssp             TCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGGGGG--CEEEECCGGGGGGGGGGGSSCSEEEECCCC
T ss_pred             cCCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCccccccCC--ceEEecCcCCHHHHHHHhcCCCEEEECCCc
Confidence            457999999999999999999999999  9999999876543211100  013457999999999999999999999986


Q ss_pred             CCCCCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCChh-HHHHHHHHHHH
Q 018503          127 PIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-LAEVCREWEGT  205 (355)
Q Consensus       127 ~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~~y-~~k~~~~~~~~  205 (355)
                      ..    ....+..++++|+.++.++++++++  .+.+++|++||.++  |+.           +...| .+|...+.+..
T Consensus        95 ~~----~~~~~~~~~~~n~~~~~~~~~~~~~--~~~~~iv~~SS~~~--~~~-----------~~~~Y~~sK~~~e~~~~  155 (242)
T 2bka_A           95 TR----GKAGAEGFVRVDRDYVLKSAELAKA--GGCKHFNLLSSKGA--DKS-----------SNFLYLQVKGEVEAKVE  155 (242)
T ss_dssp             CH----HHHHHHHHHHHHTHHHHHHHHHHHH--TTCCEEEEECCTTC--CTT-----------CSSHHHHHHHHHHHHHH
T ss_pred             cc----ccCCcccceeeeHHHHHHHHHHHHH--CCCCEEEEEccCcC--CCC-----------CcchHHHHHHHHHHHHH
Confidence            31    1234567889999999999999998  67889999999887  652           23457 66655544443


Q ss_pred             HhccCCCC-eEEEEEecEEEeCCCCcccchHHHH-HHH-hCCCCCCCCcceecccHHHHHHHHHHHHhCCCCCCceEecC
Q 018503          206 ALKVNKDV-RLALIRIGIVLGKDGGALAKMIPLF-MMF-AGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRGVINGTA  282 (355)
Q Consensus       206 ~~~~~~~~-~~~i~Rp~~i~G~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~~~~~~i~~  282 (355)
                          ..++ +++++||+.++|+....  .....+ ... ...+...  ....+++++|+|++++.++.++...+.|++.+
T Consensus       156 ----~~~~~~~~~vrpg~v~~~~~~~--~~~~~~~~~~~~~~~~~~--~~~~~~~~~dva~~~~~~~~~~~~~~~~~~~~  227 (242)
T 2bka_A          156 ----ELKFDRYSVFRPGVLLCDRQES--RPGEWLVRKFFGSLPDSW--ASGHSVPVVTVVRAMLNNVVRPRDKQMELLEN  227 (242)
T ss_dssp             ----TTCCSEEEEEECCEEECTTGGG--SHHHHHHHHHHCSCCTTG--GGGTEEEHHHHHHHHHHHHTSCCCSSEEEEEH
T ss_pred             ----hcCCCCeEEEcCceecCCCCCC--cHHHHHHHHhhcccCccc--cCCcccCHHHHHHHHHHHHhCccccCeeEeeH
Confidence                2467 69999999999986422  112211 111 1222111  12358999999999999999887667776643

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2

Probab=99.92  E-value=3.2e-26  Score=202.64  Aligned_cols=226  Identities=16%  Similarity=0.217  Sum_probs=156.7

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchh------h---ccCCCCCCccCCCeeecCCcchhhhcCCCcEE
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKA------E---LIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAV  120 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~------~---~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~v  120 (355)
                      +|+|+||||||++|++|++.|++.|++|++++|+.+..      .   .+.....  ....+|+.|++++.++++++|+|
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~~~l~~~~v--~~v~~D~~d~~~l~~~~~~~d~v   81 (308)
T 1qyc_A            4 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGA--NIVHGSIDDHASLVEAVKNVDVV   81 (308)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTC--EEECCCTTCHHHHHHHHHTCSEE
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHHHhCCC--EEEEeccCCHHHHHHHHcCCCEE
Confidence            47899999999999999999999999999999986432      0   0111110  13457899999999999999999


Q ss_pred             EECCCCCCCCCCChhhHHHHHHHhhhhHHHHHHHHHcCCCC-CCcEEEEeeeeeeeeCCCCCccccCCCCCCC---hhHH
Q 018503          121 VNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEG-VRPSVLVSATALGYYGTSETEVFDESSPSGN---DYLA  196 (355)
Q Consensus       121 i~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~-~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~---~y~~  196 (355)
                      ||+++..                ++.++.++++++++  .+ +++||+ |+     ||...    ++..+..+   .|.+
T Consensus        82 i~~a~~~----------------~~~~~~~l~~aa~~--~g~v~~~v~-S~-----~g~~~----~~~~~~~p~~~~y~s  133 (308)
T 1qyc_A           82 ISTVGSL----------------QIESQVNIIKAIKE--VGTVKRFFP-SE-----FGNDV----DNVHAVEPAKSVFEV  133 (308)
T ss_dssp             EECCCGG----------------GSGGGHHHHHHHHH--HCCCSEEEC-SC-----CSSCT----TSCCCCTTHHHHHHH
T ss_pred             EECCcch----------------hhhhHHHHHHHHHh--cCCCceEee-cc-----cccCc----cccccCCcchhHHHH
Confidence            9999842                25677899999998  67 888874 32     55321    22222222   3444


Q ss_pred             HHHHHHHHHHhccCCCCeEEEEEecEEEeCCCCcccchHHHHHHHhCCC---CCCCCcceecccHHHHHHHHHHHHhCCC
Q 018503          197 EVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGP---LGSGQQWFSWIHLDDIVNLIYEALSNPS  273 (355)
Q Consensus       197 k~~~~~~~~~~~~~~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~i~v~Dva~~~~~~~~~~~  273 (355)
                      |...+....    ..+++++++||+.++|+....+....  .....+..   +++++..+++++++|+|++++.++.++.
T Consensus       134 K~~~e~~~~----~~~~~~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~  207 (308)
T 1qyc_A          134 KAKVRRAIE----AEGIPYTYVSSNCFAGYFLRSLAQAG--LTAPPRDKVVILGDGNARVVFVKEEDIGTFTIKAVDDPR  207 (308)
T ss_dssp             HHHHHHHHH----HHTCCBEEEECCEEHHHHTTTTTCTT--CSSCCSSEEEEETTSCCEEEEECHHHHHHHHHTTSSCGG
T ss_pred             HHHHHHHHH----hcCCCeEEEEeceecccccccccccc--ccCCCCCceEEecCCCceEEEecHHHHHHHHHHHHhCcc
Confidence            443333322    34899999999999885322111110  00001111   2567888999999999999999998765


Q ss_pred             -CCCceEecC-CCccCHHHHHHHHHHHhCCCC-CCCCcHHH
Q 018503          274 -YRGVINGTA-PNPVRLAEMCDHLGNVLGRPS-WLPVPEFA  311 (355)
Q Consensus       274 -~~~~~~i~~-~~~~s~~el~~~i~~~~g~~~-~~~~~~~~  311 (355)
                       .++.|++.+ ++.+|+.|+++.+++.+|++. ...+|...
T Consensus       208 ~~~~~~~~~g~~~~~s~~e~~~~~~~~~g~~~~~~~~~~~~  248 (308)
T 1qyc_A          208 TLNKTLYLRLPANTLSLNELVALWEKKIDKTLEKAYVPEEE  248 (308)
T ss_dssp             GTTEEEECCCGGGEEEHHHHHHHHHHHTTSCCEEEEECHHH
T ss_pred             ccCeEEEEeCCCCccCHHHHHHHHHHHhCCCCceEeCCHHH
Confidence             345788875 468999999999999999883 33555443

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*

Probab=99.92  E-value=2.5e-25  Score=197.76  Aligned_cols=223  Identities=17%  Similarity=0.203  Sum_probs=156.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCc-hhhcc---CCCCCCccCCCeeecCCcchhhhcCCCcEEEECC
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRS-KAELI---FPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLA  124 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~-~~~~~---~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a  124 (355)
                      |+++|+||||||++|++++++|++.|++|++++|+++ ....+   .....  ....+|+.|++++.++++++|+|||++
T Consensus        10 m~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~l~~~~v--~~v~~Dl~d~~~l~~a~~~~d~vi~~a   87 (318)
T 2r6j_A           10 MKSKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEFQSLGA--IIVKGELDEHEKLVELMKKVDVVISAL   87 (318)
T ss_dssp             CCCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTCSCHHHHHHHHHTTC--EEEECCTTCHHHHHHHHTTCSEEEECC
T ss_pred             CCCeEEEECCCchHHHHHHHHHHHCCCcEEEEECCCCchhhHHHHhhcCCC--EEEEecCCCHHHHHHHHcCCCEEEECC
Confidence            3458999999999999999999999999999999875 21111   00100  134578999999999999999999999


Q ss_pred             CCCCCCCCChhhHHHHHHHhhhhHHHHHHHHHcCCCC-CCcEEEEeeeeeeeeCCCCCccccCCCCCC---ChhHHHHHH
Q 018503          125 GTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEG-VRPSVLVSATALGYYGTSETEVFDESSPSG---NDYLAEVCR  200 (355)
Q Consensus       125 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~-~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~---~~y~~k~~~  200 (355)
                      +..                ++.++.++++++++  .+ +++||+ |+     ||...    ++..+..   +.|.+|...
T Consensus        88 ~~~----------------~~~~~~~l~~aa~~--~g~v~~~v~-S~-----~g~~~----~~~~~~~p~~~~y~sK~~~  139 (318)
T 2r6j_A           88 AFP----------------QILDQFKILEAIKV--AGNIKRFLP-SD-----FGVEE----DRINALPPFEALIERKRMI  139 (318)
T ss_dssp             CGG----------------GSTTHHHHHHHHHH--HCCCCEEEC-SC-----CSSCT----TTCCCCHHHHHHHHHHHHH
T ss_pred             chh----------------hhHHHHHHHHHHHh--cCCCCEEEe-ec-----cccCc----ccccCCCCcchhHHHHHHH
Confidence            842                25677899999998  67 888874 32     65321    2222222   234444433


Q ss_pred             HHHHHHhccCCCCeEEEEEecEEEeCCCCcccchHHHH-HH-HhCCC---CCCCCcceecccHHHHHHHHHHHHhCCC-C
Q 018503          201 EWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLF-MM-FAGGP---LGSGQQWFSWIHLDDIVNLIYEALSNPS-Y  274 (355)
Q Consensus       201 ~~~~~~~~~~~~~~~~i~Rp~~i~G~~~~~~~~~~~~~-~~-~~~~~---~~~~~~~~~~i~v~Dva~~~~~~~~~~~-~  274 (355)
                      +...    ...+++++++||+.+++.       +.+.+ .. ..+..   +++++..+++++++|+|++++.++.++. .
T Consensus       140 e~~~----~~~~~~~~~lr~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~~  208 (318)
T 2r6j_A          140 RRAI----EEANIPYTYVSANCFASY-------FINYLLRPYDPKDEITVYGTGEAKFAMNYEQDIGLYTIKVATDPRAL  208 (318)
T ss_dssp             HHHH----HHTTCCBEEEECCEEHHH-------HHHHHHCTTCCCSEEEEETTSCCEEEEECHHHHHHHHHHHTTCGGGT
T ss_pred             HHHH----HhcCCCeEEEEcceehhh-------hhhhhccccCCCCceEEecCCCceeeEeeHHHHHHHHHHHhcCcccc
Confidence            3322    236899999999988764       22221 11 12222   2567888999999999999999998765 3


Q ss_pred             CCceEecC-CCccCHHHHHHHHHHHhCCCC-CCCCcHHHH
Q 018503          275 RGVINGTA-PNPVRLAEMCDHLGNVLGRPS-WLPVPEFAL  312 (355)
Q Consensus       275 ~~~~~i~~-~~~~s~~el~~~i~~~~g~~~-~~~~~~~~~  312 (355)
                      ++.|++.+ ++.+|+.|+++.+++.+|++. ...+|....
T Consensus       209 ~~~~~~~g~~~~~s~~e~~~~~~~~~g~~~~~~~~~~~~~  248 (318)
T 2r6j_A          209 NRVVIYRPSTNIITQLELISRWEKKIGKKFKKIHVPEEEI  248 (318)
T ss_dssp             TEEEECCCGGGEEEHHHHHHHHHHHHTCCCEEEEECHHHH
T ss_pred             CeEEEecCCCCccCHHHHHHHHHHHhCCCCceeecCHHHH
Confidence            45777765 478999999999999999883 345555444

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}

Probab=99.92  E-value=2.4e-24  Score=183.06  Aligned_cols=201  Identities=12%  Similarity=0.108  Sum_probs=134.8

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHhCC-CeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcCCCcEEEECCCC
Q 018503           48 ASQMTVSVTGATGFIGRRLVQRLQADN-HQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT  126 (355)
Q Consensus        48 ~~~~~IlVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~  126 (355)
                      +++|+||||||+|+||++|+++|++.| ++|++++|+++....+....  .....+|+.|++++.++++++|+|||+++.
T Consensus        21 ~~mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~~~~~~--~~~~~~Dl~d~~~~~~~~~~~D~vv~~a~~   98 (236)
T 3qvo_A           21 GHMKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKPYPTN--SQIIMGDVLNHAALKQAMQGQDIVYANLTG   98 (236)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCSSCCTT--EEEEECCTTCHHHHHHHHTTCSEEEEECCS
T ss_pred             CcccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhcccccCC--cEEEEecCCCHHHHHHHhcCCCEEEEcCCC
Confidence            345789999999999999999999999 99999999987655433211  113457899999999999999999999984


Q ss_pred             CCCCCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCCh-hHHHHHHHHHHH
Q 018503          127 PIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGND-YLAEVCREWEGT  205 (355)
Q Consensus       127 ~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~~-y~~k~~~~~~~~  205 (355)
                      .     ..          ...++++++++++  .++++||++||.++  |+................ +..+...+..  
T Consensus        99 ~-----~~----------~~~~~~~~~~~~~--~~~~~iV~iSS~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--  157 (236)
T 3qvo_A           99 E-----DL----------DIQANSVIAAMKA--CDVKRLIFVLSLGI--YDEVPGKFVEWNNAVIGEPLKPFRRAADA--  157 (236)
T ss_dssp             T-----TH----------HHHHHHHHHHHHH--TTCCEEEEECCCCC------------------CGGGHHHHHHHHH--
T ss_pred             C-----ch----------hHHHHHHHHHHHH--cCCCEEEEEeccee--cCCCCcccccchhhcccchHHHHHHHHHH--
Confidence            2     00          1245688999998  78899999999988  775433322211111112 2222222222  


Q ss_pred             HhccCCCCeEEEEEecEEEeCCCCcccchHHHHHHHhCCCCCCCCcceecccHHHHHHHHHHHHhCCC--CCCceEecCC
Q 018503          206 ALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPS--YRGVINGTAP  283 (355)
Q Consensus       206 ~~~~~~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~--~~~~~~i~~~  283 (355)
                        ....+++++++||+.++++.........      .+.     .....+++.+|+|++++.++..+.  .++.|+++++
T Consensus       158 --l~~~gi~~~~vrPg~i~~~~~~~~~~~~------~~~-----~~~~~~i~~~DvA~~i~~ll~~~~~~~g~~~~i~~~  224 (236)
T 3qvo_A          158 --IEASGLEYTILRPAWLTDEDIIDYELTS------RNE-----PFKGTIVSRKSVAALITDIIDKPEKHIGENIGINQP  224 (236)
T ss_dssp             --HHTSCSEEEEEEECEEECCSCCCCEEEC------TTS-----CCSCSEEEHHHHHHHHHHHHHSTTTTTTEEEEEECS
T ss_pred             --HHHCCCCEEEEeCCcccCCCCcceEEec------cCC-----CCCCcEECHHHHHHHHHHHHcCcccccCeeEEecCC
Confidence              2246999999999999987543221110      111     111358999999999999999876  5568999987


Q ss_pred             C
Q 018503          284 N  284 (355)
Q Consensus       284 ~  284 (355)
                      +
T Consensus       225 ~  225 (236)
T 3qvo_A          225 G  225 (236)
T ss_dssp             S
T ss_pred             C
Confidence            6

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}

Probab=99.92  E-value=2.6e-25  Score=196.61  Aligned_cols=225  Identities=19%  Similarity=0.177  Sum_probs=155.5

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCC-------chhhcc---C-CCCCCccCCCeeecCCcchhhhcCCCc
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSR-------SKAELI---F-PGKKTRFFPGVMIAEEPQWRDCIQGST  118 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~-------~~~~~~---~-~~~~~~~~~~~d~~~~~~~~~~~~~~d  118 (355)
                      +|+|+||||||++|++|+++|++.|++|++++|+.       ++...+   . ...   ....+|+.|++++.++++++|
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~l~~~~v---~~v~~D~~d~~~l~~~~~~~d   78 (307)
T 2gas_A            2 ENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELIDNYQSLGV---ILLEGDINDHETLVKAIKQVD   78 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHHTCCEEEEECCSCCSSCHHHHHHHHHHHHHTTC---EEEECCTTCHHHHHHHHTTCS
T ss_pred             CcEEEEECCCchHHHHHHHHHHhCCCcEEEEECCCcccCChHHHHHHHHHHHhCCC---EEEEeCCCCHHHHHHHHhCCC
Confidence            46899999999999999999999999999999987       221111   0 111   134578889999999999999


Q ss_pred             EEEECCCCCCCCCCChhhHHHHHHHhhhhHHHHHHHHHcCCCC-CCcEEEEeeeeeeeeCCCCCccccCCCCCC---Chh
Q 018503          119 AVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEG-VRPSVLVSATALGYYGTSETEVFDESSPSG---NDY  194 (355)
Q Consensus       119 ~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~-~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~---~~y  194 (355)
                      +|||+++...                +.++.++++++++  .+ +++||+ |   +  ||...    ++..+..   +.|
T Consensus        79 ~vi~~a~~~~----------------~~~~~~l~~aa~~--~g~v~~~v~-S---~--~g~~~----~~~~~~~p~~~~y  130 (307)
T 2gas_A           79 IVICAAGRLL----------------IEDQVKIIKAIKE--AGNVKKFFP-S---E--FGLDV----DRHDAVEPVRQVF  130 (307)
T ss_dssp             EEEECSSSSC----------------GGGHHHHHHHHHH--HCCCSEEEC-S---C--CSSCT----TSCCCCTTHHHHH
T ss_pred             EEEECCcccc----------------cccHHHHHHHHHh--cCCceEEee-c---c--cccCc----ccccCCCcchhHH
Confidence            9999998531                5677899999988  67 888873 3   2  65322    1222222   234


Q ss_pred             HHHHHHHHHHHHhccCCCCeEEEEEecEEEeCCCCcccchHHHHHHHhCCC---CCCCCcceecccHHHHHHHHHHHHhC
Q 018503          195 LAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGP---LGSGQQWFSWIHLDDIVNLIYEALSN  271 (355)
Q Consensus       195 ~~k~~~~~~~~~~~~~~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~i~v~Dva~~~~~~~~~  271 (355)
                      .+|...+...    ...+++++++||+.++++....+....  ........   +++++..+++++++|+|++++.++.+
T Consensus       131 ~sK~~~e~~~----~~~~i~~~~lrp~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~  204 (307)
T 2gas_A          131 EEKASIRRVI----EAEGVPYTYLCCHAFTGYFLRNLAQLD--ATDPPRDKVVILGDGNVKGAYVTEADVGTFTIRAAND  204 (307)
T ss_dssp             HHHHHHHHHH----HHHTCCBEEEECCEETTTTGGGTTCTT--CSSCCSSEEEEETTSCSEEEEECHHHHHHHHHHHHTC
T ss_pred             HHHHHHHHHH----HHcCCCeEEEEcceeeccccccccccc--cccCCCCeEEEecCCCcceEEeeHHHHHHHHHHHHcC
Confidence            4444333332    235899999999999886422111100  00001111   25677889999999999999999987


Q ss_pred             CCC-CCceEecC-CCccCHHHHHHHHHHHhCCCC-CCCCcHHH
Q 018503          272 PSY-RGVINGTA-PNPVRLAEMCDHLGNVLGRPS-WLPVPEFA  311 (355)
Q Consensus       272 ~~~-~~~~~i~~-~~~~s~~el~~~i~~~~g~~~-~~~~~~~~  311 (355)
                      +.. ++.|++.+ ++.+|+.|+++.+++.+|++. ...+|...
T Consensus       205 ~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~~~~~~~~~~~  247 (307)
T 2gas_A          205 PNTLNKAVHIRLPKNYLTQNEVIALWEKKIGKTLEKTYVSEEQ  247 (307)
T ss_dssp             GGGTTEEEECCCGGGEEEHHHHHHHHHHHHTSCCEEEEECHHH
T ss_pred             ccccCceEEEeCCCCcCCHHHHHHHHHHHhCCCCceeecCHHH
Confidence            653 45677765 468999999999999999873 33455443

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}

Probab=99.91  E-value=1.2e-24  Score=193.53  Aligned_cols=221  Identities=14%  Similarity=0.165  Sum_probs=156.8

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCC-c-----hhhcc----CCCCCCccCCCeeecCCcchhhhcCCCcE
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSR-S-----KAELI----FPGKKTRFFPGVMIAEEPQWRDCIQGSTA  119 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~-~-----~~~~~----~~~~~~~~~~~~d~~~~~~~~~~~~~~d~  119 (355)
                      +|+|+||||||++|++|+++|++.|++|++++|+. +     ....+    ....   ....+|+.|++++.++++++|+
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~l~~~~~~~v---~~v~~D~~d~~~l~~a~~~~d~   80 (321)
T 3c1o_A            4 MEKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFRSMGV---TIIEGEMEEHEKMVSVLKQVDI   80 (321)
T ss_dssp             CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECCCCTTCCHHHHHHHHHHHHTTC---EEEECCTTCHHHHHHHHTTCSE
T ss_pred             ccEEEEEcCCchhHHHHHHHHHhCCCcEEEEECCcccccChHHHHHHHHhhcCCc---EEEEecCCCHHHHHHHHcCCCE
Confidence            47899999999999999999999999999999986 2     11110    0111   1345789999999999999999


Q ss_pred             EEECCCCCCCCCCChhhHHHHHHHhhhhHHHHHHHHHcCCCC-CCcEEEEeeeeeeeeCCCCCccccCCCCCC---ChhH
Q 018503          120 VVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEG-VRPSVLVSATALGYYGTSETEVFDESSPSG---NDYL  195 (355)
Q Consensus       120 vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~-~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~---~~y~  195 (355)
                      |||+++..                .+.++.++++++++  .+ +++||+  |  +  ||...    ++..+..   +.|.
T Consensus        81 vi~~a~~~----------------~~~~~~~l~~aa~~--~g~v~~~v~--S--~--~g~~~----~~~~~~~p~~~~y~  132 (321)
T 3c1o_A           81 VISALPFP----------------MISSQIHIINAIKA--AGNIKRFLP--S--D--FGCEE----DRIKPLPPFESVLE  132 (321)
T ss_dssp             EEECCCGG----------------GSGGGHHHHHHHHH--HCCCCEEEC--S--C--CSSCG----GGCCCCHHHHHHHH
T ss_pred             EEECCCcc----------------chhhHHHHHHHHHH--hCCccEEec--c--c--cccCc----cccccCCCcchHHH
Confidence            99999842                16678899999998  67 888872  2  2  65321    2222222   2344


Q ss_pred             HHHHHHHHHHHhccCCCCeEEEEEecEEEeCCCCcccchHHHHHH-----HhCCC---CCCCCcceecccHHHHHHHHHH
Q 018503          196 AEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMM-----FAGGP---LGSGQQWFSWIHLDDIVNLIYE  267 (355)
Q Consensus       196 ~k~~~~~~~~~~~~~~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~-----~~~~~---~~~~~~~~~~i~v~Dva~~~~~  267 (355)
                      +|...+....    ..+++++++||+.++++.       .+.+..     ..+..   ++.++..+++++++|+|++++.
T Consensus       133 sK~~~e~~~~----~~~~~~~~lrp~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~  201 (321)
T 3c1o_A          133 KKRIIRRAIE----AAALPYTYVSANCFGAYF-------VNYLLHPSPHPNRNDDIVIYGTGETKFVLNYEEDIAKYTIK  201 (321)
T ss_dssp             HHHHHHHHHH----HHTCCBEEEECCEEHHHH-------HHHHHCCCSSCCTTSCEEEETTSCCEEEEECHHHHHHHHHH
T ss_pred             HHHHHHHHHH----HcCCCeEEEEeceecccc-------ccccccccccccccCceEEecCCCcceeEeeHHHHHHHHHH
Confidence            4444333332    348999999999988752       111110     11222   2567888999999999999999


Q ss_pred             HHhCCCC-CCceEecC-CCccCHHHHHHHHHHHhCCCC-CCCCcHHHH
Q 018503          268 ALSNPSY-RGVINGTA-PNPVRLAEMCDHLGNVLGRPS-WLPVPEFAL  312 (355)
Q Consensus       268 ~~~~~~~-~~~~~i~~-~~~~s~~el~~~i~~~~g~~~-~~~~~~~~~  312 (355)
                      ++.++.. ++.|++.+ ++.+|+.|+++.+++.+|++. ...+|....
T Consensus       202 ~l~~~~~~g~~~~~~g~~~~~t~~e~~~~~~~~~g~~~~~~~~~~~~~  249 (321)
T 3c1o_A          202 VACDPRCCNRIVIYRPPKNIISQNELISLWEAKSGLSFKKVHMPDEQL  249 (321)
T ss_dssp             HHHCGGGTTEEEECCCGGGEEEHHHHHHHHHHHHTSCCCEEEECHHHH
T ss_pred             HHhCccccCeEEEEeCCCCcccHHHHHHHHHHHcCCcceeeeCCHHHH
Confidence            9998653 45788876 478999999999999999883 345554443

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}

Probab=99.91  E-value=4.2e-25  Score=189.97  Aligned_cols=219  Identities=16%  Similarity=0.060  Sum_probs=154.5

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcC----CCcEEEECCCC
Q 018503           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ----GSTAVVNLAGT  126 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~----~~d~vi~~a~~  126 (355)
                      |+||||||+|+||++++++|+++|++|++++|+.+....         ...+|+.+.+++.++++    ++|+|||+||.
T Consensus         2 k~vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~~~~~~~---------~~~~D~~~~~~~~~~~~~~~~~~d~vi~~Ag~   72 (255)
T 2dkn_A            2 SVIAITGSASGIGAALKELLARAGHTVIGIDRGQADIEA---------DLSTPGGRETAVAAVLDRCGGVLDGLVCCAGV   72 (255)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC---------CTTSHHHHHHHHHHHHHHHTTCCSEEEECCCC
T ss_pred             cEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCChhHccc---------cccCCcccHHHHHHHHHHcCCCccEEEECCCC
Confidence            589999999999999999999999999999998765332         13478888888888775    89999999997


Q ss_pred             CCCCCCChhhHHHHHHHhhhhHHHHHHHHHcC--CCCCCcEEEEeeeeeeeeCCCCCc-cccC-------C---------
Q 018503          127 PIGTRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETE-VFDE-------S---------  187 (355)
Q Consensus       127 ~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~~~~v~~Ss~~~~~yg~~~~~-~~~e-------~---------  187 (355)
                      ...    ...+...+++|+.++.++++++...  ..+.+++|++||..+  |+..... +..|       .         
T Consensus        73 ~~~----~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  146 (255)
T 2dkn_A           73 GVT----AANSGLVVAVNYFGVSALLDGLAEALSRGQQPAAVIVGSIAA--TQPGAAELPMVEAMLAGDEARAIELAEQQ  146 (255)
T ss_dssp             CTT----SSCHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGG--GSTTGGGCHHHHHHHHTCHHHHHHHHHHH
T ss_pred             CCc----chhHHHHHHHHhHHHHHHHHHHHHHhhhcCCceEEEEecccc--ccccccccchhhhhcccchhhhhhhcccc
Confidence            421    2346788999999999999977552  135689999999988  6533111 1100       0         


Q ss_pred             CCCCChh-HHHHHHHHHHHHhccC---CCCeEEEEEecEEEeCCCCcc-cc-hHHHHHHHhCCCCCCCCcceecccHHHH
Q 018503          188 SPSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGAL-AK-MIPLFMMFAGGPLGSGQQWFSWIHLDDI  261 (355)
Q Consensus       188 ~~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~i~Rp~~i~G~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~i~v~Dv  261 (355)
                      .++...| .+|...+.+...+..+   .+++++++||+.++|+..... .. ...  .....  +. + ...++++++|+
T Consensus       147 ~~~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~pg~v~~~~~~~~~~~~~~~--~~~~~--~~-~-~~~~~~~~~dv  220 (255)
T 2dkn_A          147 GQTHLAYAGSKYAVTCLARRNVVDWAGRGVRLNVVAPGAVETPLLQASKADPRYG--ESTRR--FV-A-PLGRGSEPREV  220 (255)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECCBCSHHHHHHHHCTTTH--HHHHS--CC-C-TTSSCBCHHHH
T ss_pred             CCcchhHHHHHHHHHHHHHHHHHHHhhcCcEEEEEcCCcccchhhhhcccchhhH--HHHHH--HH-H-HhcCCCCHHHH
Confidence            1233457 7787777766665544   589999999999998742111 00 000  00110  01 1 34578999999


Q ss_pred             HHHHHHHHhCCC---CCCceEecCCCccCHHH
Q 018503          262 VNLIYEALSNPS---YRGVINGTAPNPVRLAE  290 (355)
Q Consensus       262 a~~~~~~~~~~~---~~~~~~i~~~~~~s~~e  290 (355)
                      |++++.++..+.   .+..|++.+|..++++|
T Consensus       221 a~~~~~l~~~~~~~~~G~~~~v~gg~~~~~~e  252 (255)
T 2dkn_A          221 AEAIAFLLGPQASFIHGSVLFVDGGMDALMRA  252 (255)
T ss_dssp             HHHHHHHHSGGGTTCCSCEEEESTTHHHHHCT
T ss_pred             HHHHHHHhCCCcccceeeEEEecCCeEeeeec
Confidence            999999998652   35589999987666543

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*

Probab=99.90  E-value=2.1e-23  Score=175.42  Aligned_cols=199  Identities=13%  Similarity=0.126  Sum_probs=136.4

Q ss_pred             CCEEEEEcCCchHHHHHHHHHH-hCCCeEEEEecCCc-hhhccCCCCCCccCCCeeecCCcchhhhcCCCcEEEECCCCC
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQ-ADNHQVRVLTRSRS-KAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTP  127 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~-~~g~~V~~~~r~~~-~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~~  127 (355)
                      +++|+||||+|+||++++++|+ +.|++|++++|+++ ....+...........+|+.|++++.++++++|+|||+||..
T Consensus         5 mk~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vv~~ag~~   84 (221)
T 3r6d_A            5 YXYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEIIDHERVTVIEGSFQNPGXLEQAVTNAEVVFVGAMES   84 (221)
T ss_dssp             CSEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHHHHTSTTEEEEECCTTCHHHHHHHHTTCSEEEESCCCC
T ss_pred             EEEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccchhhccCCCceEEEECCCCCHHHHHHHHcCCCEEEEcCCCC
Confidence            3469999999999999999999 89999999999977 544331000001134578999999999999999999999852


Q ss_pred             CCCCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCC-hh-HHHHHHHHHHH
Q 018503          128 IGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGN-DY-LAEVCREWEGT  205 (355)
Q Consensus       128 ~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~-~y-~~k~~~~~~~~  205 (355)
                                      |+. ++++++++++  .+++++|++||..+  |+...........+... .| .+|...+.+..
T Consensus        85 ----------------n~~-~~~~~~~~~~--~~~~~iv~iSs~~~--~~~~~~~~~~~~~~~~~~~y~~~K~~~e~~~~  143 (221)
T 3r6d_A           85 ----------------GSD-MASIVKALSR--XNIRRVIGVSMAGL--SGEFPVALEKWTFDNLPISYVQGERQARNVLR  143 (221)
T ss_dssp             ----------------HHH-HHHHHHHHHH--TTCCEEEEEEETTT--TSCSCHHHHHHHHHTSCHHHHHHHHHHHHHHH
T ss_pred             ----------------Chh-HHHHHHHHHh--cCCCeEEEEeecee--cCCCCcccccccccccccHHHHHHHHHHHHHH
Confidence                            334 8899999998  78889999999887  66432211111111222 56 55554444332


Q ss_pred             HhccCCCCeEEEEEecEEEeCC-CCcccchHHHHHHHhCCCCCCCCcceecccHHHHHHHHHHHH--hCCC--CCCceEe
Q 018503          206 ALKVNKDVRLALIRIGIVLGKD-GGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEAL--SNPS--YRGVING  280 (355)
Q Consensus       206 ~~~~~~~~~~~i~Rp~~i~G~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~--~~~~--~~~~~~i  280 (355)
                          ..+++++++||+.++++. ...+....      .+.     .....+++.+|+|++++.++  .++.  .++.+.+
T Consensus       144 ----~~~i~~~~vrpg~v~~~~~~~~~~~~~------~~~-----~~~~~~~~~~dvA~~~~~l~~~~~~~~~~~~~~~i  208 (221)
T 3r6d_A          144 ----ESNLNYTILRLTWLYNDPEXTDYELIP------EGA-----QFNDAQVSREAVVKAIFDILHAADETPFHRTSIGV  208 (221)
T ss_dssp             ----HSCSEEEEEEECEEECCTTCCCCEEEC------TTS-----CCCCCEEEHHHHHHHHHHHHTCSCCGGGTTEEEEE
T ss_pred             ----hCCCCEEEEechhhcCCCCCcceeecc------CCc-----cCCCceeeHHHHHHHHHHHHHhcChhhhhcceeee
Confidence                368999999999999873 22211100      001     11123899999999999999  7665  3456777


Q ss_pred             cCCC
Q 018503          281 TAPN  284 (355)
Q Consensus       281 ~~~~  284 (355)
                      .++.
T Consensus       209 ~~~~  212 (221)
T 3r6d_A          209 GEPG  212 (221)
T ss_dssp             ECTT
T ss_pred             cCCC
Confidence            6543

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}

Probab=99.90  E-value=5e-24  Score=185.96  Aligned_cols=237  Identities=14%  Similarity=0.009  Sum_probs=165.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCC-CCccCCCeeecCCcchhhhcC-------CCcEE
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGK-KTRFFPGVMIAEEPQWRDCIQ-------GSTAV  120 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~~-------~~d~v  120 (355)
                      ++++||||||+|+||++++++|+++|++|++++|+.+......... .......+|+.|.+++.++++       ++|+|
T Consensus         4 ~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~l   83 (281)
T 3m1a_A            4 SAKVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAAYPDRAEAISLDVTDGERIDVVAADVLARYGRVDVL   83 (281)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCCSEE
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCCceEEEeeCCCHHHHHHHHHHHHHhCCCCCEE
Confidence            3478999999999999999999999999999999887654432110 001134578889888877764       78999


Q ss_pred             EECCCCCCC---CCCChhhHHHHHHHhhhh----HHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCCh
Q 018503          121 VNLAGTPIG---TRWSSEIKKEIKESRIRV----TSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGND  193 (355)
Q Consensus       121 i~~a~~~~~---~~~~~~~~~~~~~~n~~~----~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~~  193 (355)
                      ||+||....   .....+.+...+++|+.+    ++.+++.+++  .+.+++|++||...  +..         .+....
T Consensus        84 v~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~--~~~~~iv~~sS~~~--~~~---------~~~~~~  150 (281)
T 3m1a_A           84 VNNAGRTQVGAFEETTERELRDLFELHVFGPARLTRALLPQMRE--RGSGSVVNISSFGG--QLS---------FAGFSA  150 (281)
T ss_dssp             EECCCCEEECCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH--HTCEEEEEECCGGG--TCC---------CTTCHH
T ss_pred             EECCCcCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh--cCCCEEEEEcCccc--cCC---------CCCchH
Confidence            999997422   244567778899999999    5555555555  46789999999765  321         233456


Q ss_pred             h-HHHHHHHHHHHHhccC---CCCeEEEEEecEEEeCCCCc--------ccchHHHHHHHhCCCCCCCCcceecccHHHH
Q 018503          194 Y-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGA--------LAKMIPLFMMFAGGPLGSGQQWFSWIHLDDI  261 (355)
Q Consensus       194 y-~~k~~~~~~~~~~~~~---~~~~~~i~Rp~~i~G~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dv  261 (355)
                      | .+|...+.+...+..+   .|+++++++||.+.++..+.        ...+......  ...+........+.+++|+
T Consensus       151 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~dv  228 (281)
T 3m1a_A          151 YSATKAALEQLSEGLADEVAPFGIKVLIVEPGAFRTNLFGKGAAYFSEENPAYAEKVGP--TRQLVQGSDGSQPGDPAKA  228 (281)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTCCCCEEECCBCTTTHHHHHH--HHHHHHC-----CBCHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhccCcEEEEEecCccccccccccccccCCcchhhHHHhHH--HHHHHhhccCCCCCCHHHH
Confidence            8 8888777776665554   68999999999998764321        1111111100  0001011223457889999


Q ss_pred             HHHHHHHHhCCCCCCceEecCCCccCHHHHHHHHHHHhC
Q 018503          262 VNLIYEALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLG  300 (355)
Q Consensus       262 a~~~~~~~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g  300 (355)
                      |++++.+++.+..++.|+++++....+.+....+.+.++
T Consensus       229 a~a~~~~~~~~~~~~~~~l~s~~~~~i~g~~~~i~~~~~  267 (281)
T 3m1a_A          229 AAAIRLALDTEKTPLRLALGGDAVDFLTGHLDSVRAELT  267 (281)
T ss_dssp             HHHHHHHHHSSSCCSEEEESHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHhCCCCCeEEecCchHHHHHHHHHHHHHHHHH
Confidence            999999999887778999998877777777777777664

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*

Probab=99.90  E-value=2.2e-23  Score=181.57  Aligned_cols=237  Identities=11%  Similarity=0.020  Sum_probs=165.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccC---CCCCCccCCCeeecCCcchhhhcC-------CCc
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIF---PGKKTRFFPGVMIAEEPQWRDCIQ-------GST  118 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~---~~~~~~~~~~~d~~~~~~~~~~~~-------~~d  118 (355)
                      .+++|+||||+|+||++++++|+++|++|++++|+........   ..........+|+.|.+++.++++       ++|
T Consensus        15 ~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   94 (278)
T 2bgk_A           15 QDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKHGKLD   94 (278)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             cCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCChhHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence            3578999999999999999999999999999999865433211   000001134578889888877765       799


Q ss_pred             EEEECCCCCCC-----CCCChhhHHHHHHHhhhhHHHHHHHHHcC--CCCCCcEEEEeeeeeeeeCCCCCccccCCCCCC
Q 018503          119 AVVNLAGTPIG-----TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSG  191 (355)
Q Consensus       119 ~vi~~a~~~~~-----~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~  191 (355)
                      +|||+||....     .....+.+...+++|+.++.++++++...  ..+.+++|++||...  |....        ...
T Consensus        95 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~--~~~~~--------~~~  164 (278)
T 2bgk_A           95 IMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISS--FTAGE--------GVS  164 (278)
T ss_dssp             EEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGG--TCCCT--------TSC
T ss_pred             EEEECCcccCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCeEEEEeeccc--cCCCC--------CCC
Confidence            99999997422     23345677889999999999999877552  135679999999877  54211        123


Q ss_pred             Chh-HHHHHHHHHHHHhccC---CCCeEEEEEecEEEeCCCCcccc-hHHHH-HHHhCCCCCCCCcceecccHHHHHHHH
Q 018503          192 NDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAK-MIPLF-MMFAGGPLGSGQQWFSWIHLDDIVNLI  265 (355)
Q Consensus       192 ~~y-~~k~~~~~~~~~~~~~---~~~~~~i~Rp~~i~G~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~i~v~Dva~~~  265 (355)
                      ..| .+|...+.....+..+   .|++++++||+.++++....... ..... ......+    .....+++++|+|+++
T Consensus       165 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~dva~~~  240 (278)
T 2bgk_A          165 HVYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQAA----NLKGTLLRAEDVADAV  240 (278)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSSSCCHHHHHHHHHHTC----SSCSCCCCHHHHHHHH
T ss_pred             cchHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeceecchhhhhhcccchhHHHHhhhccc----ccccccCCHHHHHHHH
Confidence            467 7787766666555432   58999999999999986432211 11111 1111111    1123589999999999


Q ss_pred             HHHHhCCC---CCCceEecCCCccCHHHHHHHHHHHh
Q 018503          266 YEALSNPS---YRGVINGTAPNPVRLAEMCDHLGNVL  299 (355)
Q Consensus       266 ~~~~~~~~---~~~~~~i~~~~~~s~~el~~~i~~~~  299 (355)
                      +.++..+.   .+..|++.+|..+++.|+++.+.+.+
T Consensus       241 ~~l~~~~~~~~~G~~~~v~gg~~~~~~e~~~~i~~~~  277 (278)
T 2bgk_A          241 AYLAGDESKYVSGLNLVIDGGYTRTNPAFPTALKHGL  277 (278)
T ss_dssp             HHHHSGGGTTCCSCEEEESTTGGGCCTHHHHHSCSCC
T ss_pred             HHHcCcccccCCCCEEEECCcccccCCccchhhhhhc
Confidence            99997532   35589999999999999999887643

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*

Probab=99.89  E-value=5.7e-23  Score=176.69  Aligned_cols=221  Identities=15%  Similarity=0.097  Sum_probs=155.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCC----CCCCccCCCeeecCCcchhhhcC-------CC
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP----GKKTRFFPGVMIAEEPQWRDCIQ-------GS  117 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~~d~~~~~~~~~~~~-------~~  117 (355)
                      ..|+|+||||+|+||++++++|+++|++|++++|+.+.......    .........+|+.|++++.++++       ++
T Consensus        10 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   89 (255)
T 1fmc_A           10 DGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKLGKV   89 (255)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSSC
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHhcCCC
Confidence            45799999999999999999999999999999998765432211    00001133578889888887765       79


Q ss_pred             cEEEECCCCCCCC--CCChhhHHHHHHHhhhhHHHHHHHHHcC--CCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCCh
Q 018503          118 TAVVNLAGTPIGT--RWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGND  193 (355)
Q Consensus       118 d~vi~~a~~~~~~--~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~~  193 (355)
                      |+|||+||.....  ....+.+...+++|+.++.++++++...  ..+.+++|++||...  +..         .+....
T Consensus        90 d~vi~~Ag~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~--~~~---------~~~~~~  158 (255)
T 1fmc_A           90 DILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAA--ENK---------NINMTS  158 (255)
T ss_dssp             CEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGG--TCC---------CTTCHH
T ss_pred             CEEEECCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhh--cCC---------CCCCcc
Confidence            9999999975332  3356677889999999999998877421  035679999999876  432         123456


Q ss_pred             h-HHHHHHHHHHHHhccC---CCCeEEEEEecEEEeCCCCcccchHHH-H-HHHhCCCCCCCCcceecccHHHHHHHHHH
Q 018503          194 Y-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPL-F-MMFAGGPLGSGQQWFSWIHLDDIVNLIYE  267 (355)
Q Consensus       194 y-~~k~~~~~~~~~~~~~---~~~~~~i~Rp~~i~G~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~i~v~Dva~~~~~  267 (355)
                      | .+|...+.+...+..+   .+++++++||+.++++.....  ..+. . ....+.++      ..+++++|+|++++.
T Consensus       159 Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~Pg~v~t~~~~~~--~~~~~~~~~~~~~~~------~~~~~~~dva~~~~~  230 (255)
T 1fmc_A          159 YASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSV--ITPEIEQKMLQHTPI------RRLGQPQDIANAALF  230 (255)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTT--CCHHHHHHHHHTCSS------CSCBCHHHHHHHHHH
T ss_pred             cHHHHHHHHHHHHHHHHHhhhcCcEEEEEecccCcchhhhhc--cChHHHHHHHhcCCc------ccCCCHHHHHHHHHH
Confidence            7 7787776665554432   489999999999998742111  1111 1 22233332      347899999999999


Q ss_pred             HHhCCC---CCCceEecCCCccCH
Q 018503          268 ALSNPS---YRGVINGTAPNPVRL  288 (355)
Q Consensus       268 ~~~~~~---~~~~~~i~~~~~~s~  288 (355)
                      ++..+.   .+..|++.+|..+|+
T Consensus       231 l~~~~~~~~~G~~~~v~gg~~~s~  254 (255)
T 1fmc_A          231 LCSPAASWVSGQILTVSGGGVQEL  254 (255)
T ss_dssp             HHSGGGTTCCSCEEEESTTSCCCC
T ss_pred             HhCCccccCCCcEEEECCceeccC
Confidence            997542   355899999987774

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2

Probab=99.89  E-value=6.1e-23  Score=175.30  Aligned_cols=218  Identities=21%  Similarity=0.145  Sum_probs=152.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcC---CCcEEEECCC
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ---GSTAVVNLAG  125 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~---~~d~vi~~a~  125 (355)
                      ..|+|+||||+|+||++++++|+++|++|++++|+.+................+|+.|.+++.++++   .+|+|||+||
T Consensus         6 ~~~~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~Ag   85 (244)
T 1cyd_A            6 SGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPGIEPVCVDLGDWDATEKALGGIGPVDLLVNNAA   85 (244)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTCCCCSEEEECCC
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCCCcEEecCCCHHHHHHHHHHcCCCCEEEECCc
Confidence            4579999999999999999999999999999999876543321100000123578899999888876   4799999999


Q ss_pred             CCCC---CCCChhhHHHHHHHhhhhHHHHHHHHHcC--CCC-CCcEEEEeeeeeeeeCCCCCccccCCCCCCChh-HHHH
Q 018503          126 TPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEG-VRPSVLVSATALGYYGTSETEVFDESSPSGNDY-LAEV  198 (355)
Q Consensus       126 ~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~-~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~~y-~~k~  198 (355)
                      ....   .....+.+...+++|+.++.++++++...  ..+ .+++|++||...  |...         +....| .+|.
T Consensus        86 ~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~iv~~sS~~~--~~~~---------~~~~~Y~~sK~  154 (244)
T 1cyd_A           86 LVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVA--HVTF---------PNLITYSSTKG  154 (244)
T ss_dssp             CCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGG--TSCC---------TTBHHHHHHHH
T ss_pred             ccCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEEcchhh--cCCC---------CCcchhHHHHH
Confidence            7532   22345677889999999999988877541  023 578999999876  5421         223467 7787


Q ss_pred             HHHHHHHHhccC---CCCeEEEEEecEEEeCCCCcc---cchHHHHHHHhCCCCCCCCcceecccHHHHHHHHHHHHhCC
Q 018503          199 CREWEGTALKVN---KDVRLALIRIGIVLGKDGGAL---AKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNP  272 (355)
Q Consensus       199 ~~~~~~~~~~~~---~~~~~~i~Rp~~i~G~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~  272 (355)
                      ..+.+.+.+..+   .+++++++||+.++++.....   ..+..  ....+.+      .+++++++|+|++++.++..+
T Consensus       155 a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~--~~~~~~~------~~~~~~~~dva~~~~~l~~~~  226 (244)
T 1cyd_A          155 AMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKVSADPEFAR--KLKERHP------LRKFAEVEDVVNSILFLLSDR  226 (244)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHHHHTCCHHHHH--HHHHHST------TSSCBCHHHHHHHHHHHHSGG
T ss_pred             HHHHHHHHHHHHhhhcCeEEEEEecCcccCccccccccCHHHHH--HHHhcCC------ccCCCCHHHHHHHHHHHhCch
Confidence            777666655443   589999999999998742211   11111  1122222      256899999999999999764


Q ss_pred             C---CCCceEecCCCc
Q 018503          273 S---YRGVINGTAPNP  285 (355)
Q Consensus       273 ~---~~~~~~i~~~~~  285 (355)
                      .   .+..+++.+|..
T Consensus       227 ~~~~~G~~~~v~gG~~  242 (244)
T 1cyd_A          227 SASTSGGGILVDAGYL  242 (244)
T ss_dssp             GTTCCSSEEEESTTGG
T ss_pred             hhcccCCEEEECCCcc
Confidence            3   345788877753

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}

Probab=99.89  E-value=1.1e-22  Score=168.63  Aligned_cols=190  Identities=13%  Similarity=0.092  Sum_probs=142.2

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcCC---CcEEEECCCC
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQG---STAVVNLAGT  126 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~---~d~vi~~a~~  126 (355)
                      +|+|+||||+|+||++++++|+ +|++|++++|+..             ...+|+.|++++.+++++   +|+|||+||.
T Consensus         3 kM~vlVtGasg~iG~~~~~~l~-~g~~V~~~~r~~~-------------~~~~D~~~~~~~~~~~~~~~~~d~vi~~ag~   68 (202)
T 3d7l_A            3 AMKILLIGASGTLGSAVKERLE-KKAEVITAGRHSG-------------DVTVDITNIDSIKKMYEQVGKVDAIVSATGS   68 (202)
T ss_dssp             SCEEEEETTTSHHHHHHHHHHT-TTSEEEEEESSSS-------------SEECCTTCHHHHHHHHHHHCCEEEEEECCCC
T ss_pred             CcEEEEEcCCcHHHHHHHHHHH-CCCeEEEEecCcc-------------ceeeecCCHHHHHHHHHHhCCCCEEEECCCC
Confidence            4689999999999999999999 9999999999864             223689999888887764   8999999996


Q ss_pred             CCC---CCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCChh-HHHHHHHH
Q 018503          127 PIG---TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-LAEVCREW  202 (355)
Q Consensus       127 ~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~~y-~~k~~~~~  202 (355)
                      ...   ...+.+.+...+++|+.++.++++++...-...+++|++||...  +..         .+....| .+|...+.
T Consensus        69 ~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~~sS~~~--~~~---------~~~~~~Y~~sK~~~~~  137 (202)
T 3d7l_A           69 ATFSPLTELTPEKNAVTISSKLGGQINLVLLGIDSLNDKGSFTLTTGIMM--EDP---------IVQGASAAMANGAVTA  137 (202)
T ss_dssp             CCCCCGGGCCHHHHHHHHHTTTHHHHHHHHTTGGGEEEEEEEEEECCGGG--TSC---------CTTCHHHHHHHHHHHH
T ss_pred             CCCCChhhCCHHHHHHHHhhccHHHHHHHHHHHHHhccCCEEEEEcchhh--cCC---------CCccHHHHHHHHHHHH
Confidence            432   22345666788899999999999998772011268999998765  321         1234567 77877777


Q ss_pred             HHHHhccC--CCCeEEEEEecEEEeCCCCcccchHHHHHHHhCCCCCCCCcceecccHHHHHHHHHHHHhCCCCCCceEe
Q 018503          203 EGTALKVN--KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRGVING  280 (355)
Q Consensus       203 ~~~~~~~~--~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~~~~~~i  280 (355)
                      +...+..+  .+++++++||+.++++...          ...      ....+++++++|+|++++.++.....++.|++
T Consensus       138 ~~~~~~~e~~~gi~v~~v~pg~v~~~~~~----------~~~------~~~~~~~~~~~dva~~~~~~~~~~~~G~~~~v  201 (202)
T 3d7l_A          138 FAKSAAIEMPRGIRINTVSPNVLEESWDK----------LEP------FFEGFLPVPAAKVARAFEKSVFGAQTGESYQV  201 (202)
T ss_dssp             HHHHHTTSCSTTCEEEEEEECCBGGGHHH----------HGG------GSTTCCCBCHHHHHHHHHHHHHSCCCSCEEEE
T ss_pred             HHHHHHHHccCCeEEEEEecCccCCchhh----------hhh------hccccCCCCHHHHHHHHHHhhhccccCceEec
Confidence            77766654  4899999999999987310          001      12235689999999999999865444557876

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}

Probab=99.88  E-value=6.8e-22  Score=170.16  Aligned_cols=213  Identities=14%  Similarity=0.033  Sum_probs=153.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcC-------CCcEEE
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ-------GSTAVV  121 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-------~~d~vi  121 (355)
                      ++++||||||+|+||+++++.|+++|++|++++|+.........     ....+|+.|++++.++++       ++|++|
T Consensus        27 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~-----~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv  101 (260)
T 3un1_A           27 QQKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKPSADPDI-----HTVAGDISKPETADRIVREGIERFGRIDSLV  101 (260)
T ss_dssp             TCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCCCCSSTTE-----EEEESCTTSHHHHHHHHHHHHHHHSCCCEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhhcccCce-----EEEEccCCCHHHHHHHHHHHHHHCCCCCEEE
Confidence            35789999999999999999999999999999998765332211     134579999988877765       799999


Q ss_pred             ECCCCCCC---CCCChhhHHHHHHHhhhhHHHHHHHH----HcCCCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCChh
Q 018503          122 NLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLI----NESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY  194 (355)
Q Consensus       122 ~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~----~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~~y  194 (355)
                      |+||....   ...+.+.+...+++|+.++.++++++    .+  .+.+++|++||...  +...       ..++...|
T Consensus       102 ~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~--~~~g~iv~isS~~~--~~~~-------~~~~~~~Y  170 (260)
T 3un1_A          102 NNAGVFLAKPFVEMTQEDYDHNLGVNVAGFFHITQRAAAEMLK--QGSGHIVSITTSLV--DQPM-------VGMPSALA  170 (260)
T ss_dssp             ECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH--TTCEEEEEECCTTT--TSCB-------TTCCCHHH
T ss_pred             ECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHH--cCCcEEEEEechhh--ccCC-------CCCccHHH
Confidence            99997533   23456778889999999999999877    34  46778999999765  3211       11223456


Q ss_pred             -HHHHHHHHHHHHhccCC---CCeEEEEEecEEEeCCCCcccchHHHHHHHhCCCCCCCCcceecccHHHHHHHHHHHHh
Q 018503          195 -LAEVCREWEGTALKVNK---DVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALS  270 (355)
Q Consensus       195 -~~k~~~~~~~~~~~~~~---~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~  270 (355)
                       .+|...+.+.+.+..+.   |+++..++||.++++.....  ...  ......+      ...+.+++|+|++++.+..
T Consensus       171 ~~sKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~--~~~--~~~~~~p------~~r~~~~~dva~av~~L~~  240 (260)
T 3un1_A          171 SLTKGGLNAVTRSLAMEFSRSGVRVNAVSPGVIKTPMHPAE--THS--TLAGLHP------VGRMGEIRDVVDAVLYLEH  240 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHTTTTTEEEEEEEECCBCCTTSCGG--GHH--HHHTTST------TSSCBCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhCcCCeEEEEEeecCCCCCCCCHH--HHH--HHhccCC------CCCCcCHHHHHHHHHHhcc
Confidence             67877776666555443   89999999999999864321  111  1112222      2357889999999999965


Q ss_pred             CCC-CCCceEecCCCccC
Q 018503          271 NPS-YRGVINGTAPNPVR  287 (355)
Q Consensus       271 ~~~-~~~~~~i~~~~~~s  287 (355)
                      ... .+..+++.+|...+
T Consensus       241 ~~~itG~~i~vdGG~~~~  258 (260)
T 3un1_A          241 AGFITGEILHVDGGQNAG  258 (260)
T ss_dssp             CTTCCSCEEEESTTGGGC
T ss_pred             cCCCCCcEEEECCCeecc
Confidence            544 45589998886543

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*

Probab=99.88  E-value=7.4e-23  Score=180.45  Aligned_cols=236  Identities=15%  Similarity=0.039  Sum_probs=163.3

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCC-----CCCccCCCeeecCCcchhhhcC-------
Q 018503           48 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-----KKTRFFPGVMIAEEPQWRDCIQ-------  115 (355)
Q Consensus        48 ~~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-----~~~~~~~~~d~~~~~~~~~~~~-------  115 (355)
                      +++|+|+||||+|+||++++++|+++|++|++++|+.+........     ........+|+.|.+++.++++       
T Consensus        24 l~~k~vlITGasggiG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g  103 (302)
T 1w6u_A           24 FQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKVAG  103 (302)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCHHHHHHHHHHHHHHcC
Confidence            3457999999999999999999999999999999987654322110     0001134578888888776664       


Q ss_pred             CCcEEEECCCCCCC---CCCChhhHHHHHHHhhhhHHHHHHHHHcC---CCCCCcEEEEeeeeeeeeCCCCCccccCCCC
Q 018503          116 GSTAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES---PEGVRPSVLVSATALGYYGTSETEVFDESSP  189 (355)
Q Consensus       116 ~~d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~~~~---~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~  189 (355)
                      .+|+|||+||....   .....+.+...+++|+.++.++++++...   ..+.+++|++||...  +..         .+
T Consensus       104 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~--~~~---------~~  172 (302)
T 1w6u_A          104 HPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYA--ETG---------SG  172 (302)
T ss_dssp             SCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHH--HHC---------CT
T ss_pred             CCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCEEEEEccccc--ccC---------CC
Confidence            56999999996422   23456777889999999999998776431   135578999999765  321         12


Q ss_pred             CCChh-HHHHHHHHHHHHhccC---CCCeEEEEEecEEEeCCC-Ccc-cchHHHHHHHhCCCCCCCCcceecccHHHHHH
Q 018503          190 SGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDG-GAL-AKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVN  263 (355)
Q Consensus       190 ~~~~y-~~k~~~~~~~~~~~~~---~~~~~~i~Rp~~i~G~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~  263 (355)
                      ....| .+|...+.+...+..+   .|++++++|||.++++.. ... .............+.      ..+.+++|+|+
T Consensus       173 ~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~p~------~~~~~~~dva~  246 (302)
T 1w6u_A          173 FVVPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLDPTGTFEKEMIGRIPC------GRLGTVEELAN  246 (302)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------CCTTSHHHHHHHTTCTT------SSCBCHHHHHH
T ss_pred             CcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeccCCCcchhhhcccchhhHHHHHhcCCc------CCCCCHHHHHH
Confidence            34567 7787777666655544   689999999999998732 111 111111122222222      24789999999


Q ss_pred             HHHHHHhCCC---CCCceEecCCCccCHHHHHHHHHHHhC
Q 018503          264 LIYEALSNPS---YRGVINGTAPNPVRLAEMCDHLGNVLG  300 (355)
Q Consensus       264 ~~~~~~~~~~---~~~~~~i~~~~~~s~~el~~~i~~~~g  300 (355)
                      +++.++..+.   .+..|++.+|..+++.|+++.+.+..|
T Consensus       247 ~~~~l~~~~~~~~~G~~~~v~gg~~~~~~~~~~~~~~~~g  286 (302)
T 1w6u_A          247 LAAFLCSDYASWINGAVIKFDGGEEVLISGEFNDLRKVTK  286 (302)
T ss_dssp             HHHHHTSGGGTTCCSCEEEESTTHHHHHHSTTGGGGGCCH
T ss_pred             HHHHHcCCcccccCCCEEEECCCeeeccCCccccchhhcc
Confidence            9999997543   355899999988888888888877665

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.87  E-value=7.2e-22  Score=172.00  Aligned_cols=234  Identities=15%  Similarity=0.131  Sum_probs=148.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccC-------CCCCCccCCCeeecCCcchhhhcC------
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIF-------PGKKTRFFPGVMIAEEPQWRDCIQ------  115 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-------~~~~~~~~~~~d~~~~~~~~~~~~------  115 (355)
                      ++++|+||||+|+||++++++|+++|++|++++|+.+......       ..........+|+.|++++.++++      
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   84 (278)
T 1spx_A            5 AEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGKF   84 (278)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccCCHHHHHHHHHHHHHHc
Confidence            4578999999999999999999999999999999876543211       100001133478889888887775      


Q ss_pred             -CCcEEEECCCCCCCC---CC----ChhhHHHHHHHhhhhHHHHHHHHHcC--CCCCCcEEEEeeeeeeeeCCCCCcccc
Q 018503          116 -GSTAVVNLAGTPIGT---RW----SSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFD  185 (355)
Q Consensus       116 -~~d~vi~~a~~~~~~---~~----~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~~~~v~~Ss~~~~~yg~~~~~~~~  185 (355)
                       ++|++||+||.....   ..    ..+.+...+++|+.++.++++++...  ..+ +++|++||......+        
T Consensus        85 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-g~iv~isS~~~~~~~--------  155 (278)
T 1spx_A           85 GKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTK-GEIVNISSIASGLHA--------  155 (278)
T ss_dssp             SCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCTTSSSSC--------
T ss_pred             CCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-CeEEEEecccccccC--------
Confidence             799999999974321   12    56677889999999999998887551  024 799999997541011        


Q ss_pred             CCCCCCChh-HHHHHHHHHHHHhcc---CCCCeEEEEEecEEEeCCCCcc----cch---HHHH-HHHhCCCCCCCCcce
Q 018503          186 ESSPSGNDY-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGAL----AKM---IPLF-MMFAGGPLGSGQQWF  253 (355)
Q Consensus       186 e~~~~~~~y-~~k~~~~~~~~~~~~---~~~~~~~i~Rp~~i~G~~~~~~----~~~---~~~~-~~~~~~~~~~~~~~~  253 (355)
                        .+....| .+|...+.+...+..   ..|+++++++||.+.++.....    ...   .... ......+.      .
T Consensus       156 --~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~------~  227 (278)
T 1spx_A          156 --TPDFPYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKECVPA------G  227 (278)
T ss_dssp             --CTTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC--------------HHHHHHHHHHCTT------S
T ss_pred             --CCCccHHHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccCccccccccCchhhhhhhHHHHHHHhcCCC------c
Confidence              1234467 777766665554433   3589999999999998753211    001   0001 11111121      2


Q ss_pred             ecccHHHHHHHHHHHHhCCC----CCCceEecCCCccCHHHHHHHHHHHh
Q 018503          254 SWIHLDDIVNLIYEALSNPS----YRGVINGTAPNPVRLAEMCDHLGNVL  299 (355)
Q Consensus       254 ~~i~v~Dva~~~~~~~~~~~----~~~~~~i~~~~~~s~~el~~~i~~~~  299 (355)
                      .+.+.+|+|++++.++..+.    .+..|++.+|..+++.|+++.+.+.+
T Consensus       228 ~~~~~~dvA~~v~~l~s~~~~~~~tG~~~~vdgG~~~~~~~~~~~~~~~~  277 (278)
T 1spx_A          228 VMGQPQDIAEVIAFLADRKTSSYIIGHQLVVDGGSSLIMGLHCQDFAKLL  277 (278)
T ss_dssp             SCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGGGC------------
T ss_pred             CCCCHHHHHHHHHHHcCccccCcccCcEEEECCCcccccCcccccHHHHh
Confidence            47899999999999987532    35589999999999999999998764

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A

Probab=99.87  E-value=9.7e-23  Score=175.55  Aligned_cols=225  Identities=12%  Similarity=0.068  Sum_probs=155.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCC-CCCccCCCeeecCCcchhhhcC-------CCcEE
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-KKTRFFPGVMIAEEPQWRDCIQ-------GSTAV  120 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~-------~~d~v  120 (355)
                      .++++|||||+|+||++++++|+++|++|++++|+.+........ ........+|+.|++++.++++       ++|++
T Consensus         7 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~l   86 (259)
T 4e6p_A            7 EGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEIGPAAYAVQMDVTRQDSIDAAIAATVEHAGGLDIL   86 (259)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHSSSCCEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCceEEEeeCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            457899999999999999999999999999999987654432211 0001134579999988877765       79999


Q ss_pred             EECCCCCCC---CCCChhhHHHHHHHhhhhHHHHHHHHHcC--C-CCCCcEEEEeeeeeeeeCCCCCccccCCCCCCChh
Q 018503          121 VNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--P-EGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY  194 (355)
Q Consensus       121 i~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~-~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~~y  194 (355)
                      ||+||....   ...+.+.+...+++|+.++.++++++...  . ....++|++||...  +..         .+....|
T Consensus        87 v~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~--~~~---------~~~~~~Y  155 (259)
T 4e6p_A           87 VNNAALFDLAPIVEITRESYEKLFAINVAGTLFTLQAAARQMIAQGRGGKIINMASQAG--RRG---------EALVAIY  155 (259)
T ss_dssp             EECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGG--TSC---------CTTBHHH
T ss_pred             EECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEECChhh--ccC---------CCCChHH
Confidence            999997532   23456778889999999999999877541  0 12468999999876  321         1234567


Q ss_pred             -HHHHHHHHHHHHhccC---CCCeEEEEEecEEEeCCCCcccchHHHHHHHhCCC-------CCCCCcceecccHHHHHH
Q 018503          195 -LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGP-------LGSGQQWFSWIHLDDIVN  263 (355)
Q Consensus       195 -~~k~~~~~~~~~~~~~---~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~i~v~Dva~  263 (355)
                       .+|...+.+...+..+   .|+++..++||.++++.......+..   ......       +........+.+++|+|+
T Consensus       156 ~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~  232 (259)
T 4e6p_A          156 CATKAAVISLTQSAGLDLIKHRINVNAIAPGVVDGEHWDGVDALFA---RYENRPRGEKKRLVGEAVPFGRMGTAEDLTG  232 (259)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTHHHHHHHHH---HHHTCCTTHHHHHHHHHSTTSSCBCTHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCCEEEEEEECCCccchhhhhhhhhh---hhccCChHHHHHHHhccCCCCCCcCHHHHHH
Confidence             7887777666655443   48999999999999885322111111   111100       011223456899999999


Q ss_pred             HHHHHHhCCC---CCCceEecCCCccC
Q 018503          264 LIYEALSNPS---YRGVINGTAPNPVR  287 (355)
Q Consensus       264 ~~~~~~~~~~---~~~~~~i~~~~~~s  287 (355)
                      +++.++....   .+..|++.+|..+|
T Consensus       233 ~v~~L~s~~~~~itG~~i~vdgG~~~s  259 (259)
T 4e6p_A          233 MAIFLASAESDYIVSQTYNVDGGNWMS  259 (259)
T ss_dssp             HHHHTTSGGGTTCCSCEEEESTTSSCC
T ss_pred             HHHHHhCCccCCCCCCEEEECcChhcC
Confidence            9999987543   35699999987654

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}

Probab=99.87  E-value=5.1e-23  Score=171.32  Aligned_cols=196  Identities=16%  Similarity=0.128  Sum_probs=143.8

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcC---CCcEEEECCCCC
Q 018503           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ---GSTAVVNLAGTP  127 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~---~~d~vi~~a~~~  127 (355)
                      |+|+||||+|+||++++++|+++  +|++++|+++........... ....+|+.|++++.++++   ++|+|||+||..
T Consensus         1 k~vlVtGasg~iG~~la~~l~~~--~V~~~~r~~~~~~~~~~~~~~-~~~~~D~~~~~~~~~~~~~~~~id~vi~~ag~~   77 (207)
T 2yut_A            1 MRVLITGATGGLGGAFARALKGH--DLLLSGRRAGALAELAREVGA-RALPADLADELEAKALLEEAGPLDLLVHAVGKA   77 (207)
T ss_dssp             CEEEEETTTSHHHHHHHHHTTTS--EEEEECSCHHHHHHHHHHHTC-EECCCCTTSHHHHHHHHHHHCSEEEEEECCCCC
T ss_pred             CEEEEEcCCcHHHHHHHHHHHhC--CEEEEECCHHHHHHHHHhccC-cEEEeeCCCHHHHHHHHHhcCCCCEEEECCCcC
Confidence            57999999999999999999998  999999987654332110000 145689999999988887   899999999975


Q ss_pred             CCC---CCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCChh-HHHHHHHHH
Q 018503          128 IGT---RWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-LAEVCREWE  203 (355)
Q Consensus       128 ~~~---~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~~y-~~k~~~~~~  203 (355)
                      ...   ....+.+...+++|+.++.++++++.+  .+.+++|++||..+  |..         .+....| .+|...+.+
T Consensus        78 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~--~~~~~iv~~sS~~~--~~~---------~~~~~~Y~~sK~a~~~~  144 (207)
T 2yut_A           78 GRASVREAGRDLVEEMLAAHLLTAAFVLKHARF--QKGARAVFFGAYPR--YVQ---------VPGFAAYAAAKGALEAY  144 (207)
T ss_dssp             CCBCSCC---CHHHHHHHHHHHHHHHHHHHCCE--EEEEEEEEECCCHH--HHS---------STTBHHHHHHHHHHHHH
T ss_pred             CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHh--cCCcEEEEEcChhh--ccC---------CCCcchHHHHHHHHHHH
Confidence            322   234566788999999999999999966  56789999999876  431         1234567 777776666


Q ss_pred             HHHhccC---CCCeEEEEEecEEEeCCCCcccchHHHHHHHhCCCCCCCCcceecccHHHHHHHHHHHHhCCCCCCceE
Q 018503          204 GTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRGVIN  279 (355)
Q Consensus       204 ~~~~~~~---~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~~~~~~  279 (355)
                      ...+..+   .|++++++||+.++++...                 +.+.....+++++|+|++++.++.++..+.+++
T Consensus       145 ~~~~~~~~~~~gi~v~~v~pg~v~t~~~~-----------------~~~~~~~~~~~~~dva~~~~~~~~~~~~~~~~~  206 (207)
T 2yut_A          145 LEAARKELLREGVHLVLVRLPAVATGLWA-----------------PLGGPPKGALSPEEAARKVLEGLFREPVPALLE  206 (207)
T ss_dssp             HHHHHHHHHTTTCEEEEECCCCBCSGGGG-----------------GGTSCCTTCBCHHHHHHHHHHHHC--CCCSCCC
T ss_pred             HHHHHHHHhhhCCEEEEEecCcccCCCcc-----------------ccCCCCCCCCCHHHHHHHHHHHHhCCCCccccc
Confidence            6555443   6899999999999887410                 011233578999999999999999876554543

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}

Probab=99.87  E-value=3.7e-22  Score=174.00  Aligned_cols=237  Identities=21%  Similarity=0.141  Sum_probs=167.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccC----CCCC---CccCCCeeecCCcchhhhcC------
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIF----PGKK---TRFFPGVMIAEEPQWRDCIQ------  115 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~~~~---~~~~~~~d~~~~~~~~~~~~------  115 (355)
                      +.++|+||||+|+||++++++|+++|++|++++|+.+......    ....   ...+..+|+.|++++.++++      
T Consensus        10 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   89 (281)
T 3svt_A           10 QDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDAVTAWH   89 (281)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHHHHHHc
Confidence            4578999999999999999999999999999999876543221    1100   11133478889888776664      


Q ss_pred             -CCcEEEECCCCCCC----CCCChhhHHHHHHHhhhhHHHHHHHHHcC--CCCCCcEEEEeeeeeeeeCCCCCccccCCC
Q 018503          116 -GSTAVVNLAGTPIG----TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESS  188 (355)
Q Consensus       116 -~~d~vi~~a~~~~~----~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~  188 (355)
                       ++|++||+||....    ...+.+.+...+++|+.++.++++++...  ..+..++|++||...  +..         .
T Consensus        90 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~--~~~---------~  158 (281)
T 3svt_A           90 GRLHGVVHCAGGSENIGPITQVDSEAWRRTVDLNVNGTMYVLKHAAREMVRGGGGSFVGISSIAA--SNT---------H  158 (281)
T ss_dssp             SCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCHHH--HSC---------C
T ss_pred             CCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEeCHHH--cCC---------C
Confidence             68999999996211    34456777889999999999998876542  134568999999876  432         1


Q ss_pred             CCCChh-HHHHHHHHHHHHhccC---CCCeEEEEEecEEEeCCCCcccchHHHH-HHHhCCCCCCCCcceecccHHHHHH
Q 018503          189 PSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLF-MMFAGGPLGSGQQWFSWIHLDDIVN  263 (355)
Q Consensus       189 ~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~i~Rp~~i~G~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~v~Dva~  263 (355)
                      +....| .+|...+.+...+..+   .++++..++||.+.++............ ......++      ..+.+++|+|+
T Consensus       159 ~~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~------~r~~~~~dva~  232 (281)
T 3svt_A          159 RWFGAYGVTKSAVDHLMQLAADELGASWVRVNSIRPGLIRTDLVAAITESAELSSDYAMCTPL------PRQGEVEDVAN  232 (281)
T ss_dssp             TTCTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTCHHHHHHHHHHCSS------SSCBCHHHHHH
T ss_pred             CCChhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhhcccCHHHHHHHHhcCCC------CCCCCHHHHHH
Confidence            234578 8887777666655443   4799999999999887432110001111 11222222      24678999999


Q ss_pred             HHHHHHhCCC---CCCceEecCCCccC-HHHHHHHHHHHhCCC
Q 018503          264 LIYEALSNPS---YRGVINGTAPNPVR-LAEMCDHLGNVLGRP  302 (355)
Q Consensus       264 ~~~~~~~~~~---~~~~~~i~~~~~~s-~~el~~~i~~~~g~~  302 (355)
                      +++.++....   .+..+++.+|...+ ..|+.+.+.+.+|.+
T Consensus       233 ~~~~l~s~~~~~itG~~~~vdgG~~~~~~~~~~~~~~~~~~~~  275 (281)
T 3svt_A          233 MAMFLLSDAASFVTGQVINVDGGQMLRRGPDFSAMLEPVFGRD  275 (281)
T ss_dssp             HHHHHHSGGGTTCCSCEEEESTTGGGSCCCCCHHHHHHHHCTT
T ss_pred             HHHHHhCcccCCCCCCEEEeCCChhcccCCcchhccccccCCc
Confidence            9999997643   45689999988776 788999999999876

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*

Probab=99.87  E-value=1.1e-21  Score=167.52  Aligned_cols=218  Identities=18%  Similarity=0.139  Sum_probs=151.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcC---CCcEEEECCC
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ---GSTAVVNLAG  125 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~---~~d~vi~~a~  125 (355)
                      ..++|+||||+|+||++++++|+++|++|++++|+.++...............+|+.|.+++.++++   ++|+|||+||
T Consensus         6 ~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~Ag   85 (244)
T 3d3w_A            6 AGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPGIEPVCVDLGDWEATERALGSVGPVDLLVNNAA   85 (244)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTCCCCCEEEECCC
T ss_pred             CCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCCCEEEEeCCCHHHHHHHHHHcCCCCEEEECCc
Confidence            3478999999999999999999999999999999876543321100000123578889998888875   5899999999


Q ss_pred             CCCC---CCCChhhHHHHHHHhhhhHHHHHHHHHcC--CCC-CCcEEEEeeeeeeeeCCCCCccccCCCCCCChh-HHHH
Q 018503          126 TPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEG-VRPSVLVSATALGYYGTSETEVFDESSPSGNDY-LAEV  198 (355)
Q Consensus       126 ~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~-~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~~y-~~k~  198 (355)
                      ....   .....+.+...+++|+.++.++++++...  ..+ .+++|++||...  +..         .+....| .+|.
T Consensus        86 ~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~--~~~---------~~~~~~Y~~sK~  154 (244)
T 3d3w_A           86 VALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCS--QRA---------VTNHSVYCSTKG  154 (244)
T ss_dssp             CCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGG--TSC---------CTTBHHHHHHHH
T ss_pred             cCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEeCchhh--ccC---------CCCCchHHHHHH
Confidence            7532   22345677889999999998888877541  013 578999999866  431         1234567 7787


Q ss_pred             HHHHHHHHhccC---CCCeEEEEEecEEEeCCCCcc---cchHHHHHHHhCCCCCCCCcceecccHHHHHHHHHHHHhCC
Q 018503          199 CREWEGTALKVN---KDVRLALIRIGIVLGKDGGAL---AKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNP  272 (355)
Q Consensus       199 ~~~~~~~~~~~~---~~~~~~i~Rp~~i~G~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~  272 (355)
                      ..+.+...+..+   .++++++++|+.++++.....   .....  ......+      ...+++++|+|++++.++..+
T Consensus       155 a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~--~~~~~~~------~~~~~~~~dva~~~~~l~~~~  226 (244)
T 3d3w_A          155 ALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATWSDPHKAK--TMLNRIP------LGKFAEVEHVVNAILFLLSDR  226 (244)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECCBTTTTHHHHSCSTTHHH--HHHHTCT------TCSCBCHHHHHHHHHHHHSGG
T ss_pred             HHHHHHHHHHHHhcccCeEEEEEEeccccccchhhhccChHHHH--HHHhhCC------CCCCcCHHHHHHHHHHHcCcc
Confidence            777666655443   489999999999998753210   11111  1122222      235899999999999999754


Q ss_pred             C---CCCceEecCCCc
Q 018503          273 S---YRGVINGTAPNP  285 (355)
Q Consensus       273 ~---~~~~~~i~~~~~  285 (355)
                      .   .+..|++.+|..
T Consensus       227 ~~~~~G~~~~v~gG~~  242 (244)
T 3d3w_A          227 SGMTTGSTLPVEGGFW  242 (244)
T ss_dssp             GTTCCSCEEEESTTGG
T ss_pred             ccCCCCCEEEECCCcc
Confidence            2   345899988753

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*

Probab=99.87  E-value=1.1e-21  Score=169.32  Aligned_cols=222  Identities=13%  Similarity=0.078  Sum_probs=152.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCC-----CCCccCCCeeecCCcchhhhcC-------C
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-----KKTRFFPGVMIAEEPQWRDCIQ-------G  116 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-----~~~~~~~~~d~~~~~~~~~~~~-------~  116 (355)
                      ++++|+||||+|+||++++++|+++|++|++++|+.+........     ........+|+.|++++.++++       +
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   85 (263)
T 3ai3_A            6 SGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDVATPEGVDAVVESVRSSFGG   85 (263)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSHHHHHHHHHHHHHHHSS
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            357899999999999999999999999999999987654322100     0001134578899888877764       7


Q ss_pred             CcEEEECCCCCCC---CCCChhhHHHHHHHhhhhHHHHHHHHHcC--CCCCCcEEEEeeeeeeeeCCCCCccccCCCCCC
Q 018503          117 STAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSG  191 (355)
Q Consensus       117 ~d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~  191 (355)
                      +|++||+||....   .....+.+...+++|+.++.++++++...  ..+.+++|++||...  +..         .+..
T Consensus        86 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~--~~~---------~~~~  154 (263)
T 3ai3_A           86 ADILVNNAGTGSNETIMEAADEKWQFYWELLVMAAVRLARGLVPGMRARGGGAIIHNASICA--VQP---------LWYE  154 (263)
T ss_dssp             CSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGG--TSC---------CTTC
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhh--cCC---------CCCc
Confidence            9999999997532   22356677889999999999888876421  035679999999876  432         1234


Q ss_pred             Chh-HHHHHHHHHHHHhccC---CCCeEEEEEecEEEeCCCCcccc---------hHHHH-HHHhC-CCCCCCCcceecc
Q 018503          192 NDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAK---------MIPLF-MMFAG-GPLGSGQQWFSWI  256 (355)
Q Consensus       192 ~~y-~~k~~~~~~~~~~~~~---~~~~~~i~Rp~~i~G~~~~~~~~---------~~~~~-~~~~~-~~~~~~~~~~~~i  256 (355)
                      ..| .+|...+.+.+.+..+   .|+++++++||.++++.......         ..... ..... .+      ...+.
T Consensus       155 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p------~~~~~  228 (263)
T 3ai3_A          155 PIYNVTKAALMMFSKTLATEVIKDNIRVNCINPGLILTPDWIKTAKELTKDNGGDWKGYLQSVADEHAP------IKRFA  228 (263)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHHHHHTTTTTCCHHHHHHHHHHHHCT------TCSCB
T ss_pred             chHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCcchhhhhHhhhcccCCcHHHHHHHHHhcCCC------CCCCc
Confidence            567 7787666665554433   58999999999999874211100         00001 11111 12      23589


Q ss_pred             cHHHHHHHHHHHHhCCC---CCCceEecCCCccC
Q 018503          257 HLDDIVNLIYEALSNPS---YRGVINGTAPNPVR  287 (355)
Q Consensus       257 ~v~Dva~~~~~~~~~~~---~~~~~~i~~~~~~s  287 (355)
                      +++|+|++++.++..+.   .+..|++.+|...+
T Consensus       229 ~~~dvA~~~~~l~s~~~~~~~G~~~~vdgG~~~s  262 (263)
T 3ai3_A          229 SPEELANFFVFLCSERATYSVGSAYFVDGGMLKT  262 (263)
T ss_dssp             CHHHHHHHHHHHTSTTCTTCCSCEEEESTTCCCC
T ss_pred             CHHHHHHHHHHHcCccccCCCCcEEEECCCcccc
Confidence            99999999999998643   35589998887655

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}

Probab=99.87  E-value=5.8e-22  Score=171.28  Aligned_cols=225  Identities=14%  Similarity=0.042  Sum_probs=147.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCC-----------CCccCCCeeecCCcchhhhcC--
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGK-----------KTRFFPGVMIAEEPQWRDCIQ--  115 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-----------~~~~~~~~d~~~~~~~~~~~~--  115 (355)
                      +.++|+||||+|+||+++++.|+++|++|++++|+.+.........           .......+|+.|.+++.++++  
T Consensus         6 ~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   85 (264)
T 2pd6_A            6 RSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQADVSEARAARCLLEQV   85 (264)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTC------------CCEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCccccccCcceEEEEecCCCHHHHHHHHHHH
Confidence            4578999999999999999999999999999999876543321100           001133468888888777664  


Q ss_pred             -----CC-cEEEECCCCCCC---CCCChhhHHHHHHHhhhhHHHHHHHHHcC--CCC-CCcEEEEeeeeeeeeCCCCCcc
Q 018503          116 -----GS-TAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEG-VRPSVLVSATALGYYGTSETEV  183 (355)
Q Consensus       116 -----~~-d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~-~~~~v~~Ss~~~~~yg~~~~~~  183 (355)
                           ++ |+|||+||....   .....+.+...+++|+.++.++++++...  ..+ .+++|++||.... ++      
T Consensus        86 ~~~~g~i~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~-~~------  158 (264)
T 2pd6_A           86 QACFSRPPSVVVSCAGITQDEFLLHMSEDDWDKVIAVNLKGTFLVTQAAAQALVSNGCRGSIINISSIVGK-VG------  158 (264)
T ss_dssp             HHHHSSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHH-HC------
T ss_pred             HHHhCCCCeEEEECCCcCCCcchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCceEEEECChhhc-cC------
Confidence                 34 999999997532   23356777889999999999999887652  013 5689999997551 22      


Q ss_pred             ccCCCCCCChh-HHHHHHHHHHHHhccC---CCCeEEEEEecEEEeCCCCcccchHHHHHHHhCCCCCCCCcceecccHH
Q 018503          184 FDESSPSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLD  259 (355)
Q Consensus       184 ~~e~~~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~  259 (355)
                          .+....| .+|...+.+.+.+..+   .|++++++||+.++++.....   .+..  ..  .+........+.+.+
T Consensus       159 ----~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~---~~~~--~~--~~~~~~~~~~~~~~~  227 (264)
T 2pd6_A          159 ----NVGQTNYAASKAGVIGLTQTAARELGRHGIRCNSVLPGFIATPMTQKV---PQKV--VD--KITEMIPMGHLGDPE  227 (264)
T ss_dssp             ----CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSCC-----------------CTGGGCTTCSCBCHH
T ss_pred             ----CCCChhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeecccccchhhc---CHHH--HH--HHHHhCCCCCCCCHH
Confidence                1234567 7787666665554443   589999999999998864321   1111  00  000011123478999


Q ss_pred             HHHHHHHHHHhCCC---CCCceEecCCCccCHHHH
Q 018503          260 DIVNLIYEALSNPS---YRGVINGTAPNPVRLAEM  291 (355)
Q Consensus       260 Dva~~~~~~~~~~~---~~~~~~i~~~~~~s~~el  291 (355)
                      |+|++++.++..+.   .+..+++.+|..++...+
T Consensus       228 dva~~~~~l~~~~~~~~~G~~~~v~gg~~~~~~~~  262 (264)
T 2pd6_A          228 DVADVVAFLASEDSGYITGTSVEVTGGLFMAENLY  262 (264)
T ss_dssp             HHHHHHHHHHSGGGTTCCSCEEEESTTC-------
T ss_pred             HHHHHHHHHcCCcccCCCCCEEEECCCceeccccC
Confidence            99999999997532   355888988876655443

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}

Probab=99.87  E-value=5.1e-21  Score=163.98  Aligned_cols=218  Identities=14%  Similarity=0.042  Sum_probs=148.8

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccC----C-CCCCccCCCeeecCCcchhhhcC-------CC
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIF----P-GKKTRFFPGVMIAEEPQWRDCIQ-------GS  117 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~-~~~~~~~~~~d~~~~~~~~~~~~-------~~  117 (355)
                      +++|+||||+|+||++++++|+++|++|++++|+.+......    . .........+|+.|++++.++++       ++
T Consensus         2 ~k~vlItGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   81 (250)
T 2cfc_A            2 SRVAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADKVLRVRADVADEGDVNAAIAATMEQFGAI   81 (250)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHSTTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence            468999999999999999999999999999999876543221    1 00001133578888888877765       79


Q ss_pred             cEEEECCCCCCCC------CCChhhHHHHHHHhhhhHHHHHHHHHcC--CCCCCcEEEEeeeeeeeeCCCCCccccCCCC
Q 018503          118 TAVVNLAGTPIGT------RWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSP  189 (355)
Q Consensus       118 d~vi~~a~~~~~~------~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~  189 (355)
                      |+|||+||.....      ....+.+...+++|+.++.++++++...  ..+.+++|++||...  +..         .+
T Consensus        82 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~--~~~---------~~  150 (250)
T 2cfc_A           82 DVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLGCRAVLPHMLLQGAGVIVNIASVAS--LVA---------FP  150 (250)
T ss_dssp             CEEEECCCCCCCTTCCSGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGG--TSC---------CT
T ss_pred             CEEEECCCCCCCCCcchhhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhh--ccC---------CC
Confidence            9999999974321      2345667889999999987776655321  035689999999876  331         12


Q ss_pred             CCChh-HHHHHHHHHHHHhccC---CCCeEEEEEecEEEeCCCCcccchHHHH-HHHhCCCCCCCCcceecccHHHHHHH
Q 018503          190 SGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLF-MMFAGGPLGSGQQWFSWIHLDDIVNL  264 (355)
Q Consensus       190 ~~~~y-~~k~~~~~~~~~~~~~---~~~~~~i~Rp~~i~G~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~v~Dva~~  264 (355)
                      ....| .+|...+.....+..+   .+++++++||+.++++............ ......++      ..+.+.+|+|++
T Consensus       151 ~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~dva~~  224 (250)
T 2cfc_A          151 GRSAYTTSKGAVLQLTKSVAVDYAGSGIRCNAVCPGMIETPMTQWRLDQPELRDQVLARIPQ------KEIGTAAQVADA  224 (250)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTTHHHHTSHHHHHHHHTTCTT------CSCBCHHHHHHH
T ss_pred             CchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCccCccccccCCHHHHHHHHhcCCC------CCCcCHHHHHHH
Confidence            34567 7787766665554433   4899999999999998643210000111 12222222      247899999999


Q ss_pred             HHHHHhCCC---CCCceEecCCC
Q 018503          265 IYEALSNPS---YRGVINGTAPN  284 (355)
Q Consensus       265 ~~~~~~~~~---~~~~~~i~~~~  284 (355)
                      ++.++..+.   .+..+++.+|.
T Consensus       225 ~~~l~~~~~~~~~G~~~~v~gG~  247 (250)
T 2cfc_A          225 VMFLAGEDATYVNGAALVMDGAY  247 (250)
T ss_dssp             HHHHHSTTCTTCCSCEEEESTTG
T ss_pred             HHHHcCchhhcccCCEEEECCce
Confidence            999998653   34578887764

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}

Probab=99.86  E-value=5e-21  Score=165.01  Aligned_cols=220  Identities=12%  Similarity=0.063  Sum_probs=150.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCC----CCCCccCCCeeecCCcchhhhcC-------CC
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP----GKKTRFFPGVMIAEEPQWRDCIQ-------GS  117 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~~d~~~~~~~~~~~~-------~~  117 (355)
                      .+++|+||||+|+||++++++|+++|++|++++|+.+.......    .........+|+.|.+++.++++       ++
T Consensus        12 ~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   91 (260)
T 3awd_A           12 DNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGHDVSSVVMDVTNTESVQNAVRSVHEQEGRV   91 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            35789999999999999999999999999999998764332110    00001134578889888877764       78


Q ss_pred             cEEEECCCCCC-C---CCCChhhHHHHHHHhhhhHHHHHHHHHcC--CCCCCcEEEEeeeeeeeeCCCCCccccCCCCCC
Q 018503          118 TAVVNLAGTPI-G---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSG  191 (355)
Q Consensus       118 d~vi~~a~~~~-~---~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~  191 (355)
                      |+|||+||... .   .....+.+...+++|+.++.++++++...  ..+.+++|++||...  +....       ..+.
T Consensus        92 d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~--~~~~~-------~~~~  162 (260)
T 3awd_A           92 DILVACAGICISEVKAEDMTDGQWLKQVDINLNGMFRSCQAVGRIMLEQKQGVIVAIGSMSG--LIVNR-------PQQQ  162 (260)
T ss_dssp             CEEEECCCCCCCSCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGG--TSCCS-------SSCC
T ss_pred             CEEEECCCCCCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEecchh--cccCC-------CCCc
Confidence            99999999753 1   23345667888999999999998877531  025678999999765  32110       0112


Q ss_pred             Chh-HHHHHHHHHHHHhccC---CCCeEEEEEecEEEeCCCC-cccchHHHH-HHHhCCCCCCCCcceecccHHHHHHHH
Q 018503          192 NDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGG-ALAKMIPLF-MMFAGGPLGSGQQWFSWIHLDDIVNLI  265 (355)
Q Consensus       192 ~~y-~~k~~~~~~~~~~~~~---~~~~~~i~Rp~~i~G~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~i~v~Dva~~~  265 (355)
                      ..| .+|...+.+...+..+   .+++++++||+.++++... .... .... ....+.++      ..+++.+|+|+++
T Consensus       163 ~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~pg~v~t~~~~~~~~~-~~~~~~~~~~~~~------~~~~~~~dva~~~  235 (260)
T 3awd_A          163 AAYNASKAGVHQYIRSLAAEWAPHGIRANAVAPTYIETTLTRFGMEK-PELYDAWIAGTPM------GRVGQPDEVASVV  235 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTHHHHTC-HHHHHHHHHTCTT------SSCBCHHHHHHHH
T ss_pred             cccHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeeeeccchhhcccCC-hHHHHHHHhcCCc------CCCCCHHHHHHHH
Confidence            467 7787777666655443   5899999999999998643 1110 0111 22222222      2478999999999


Q ss_pred             HHHHhCCC---CCCceEecCCC
Q 018503          266 YEALSNPS---YRGVINGTAPN  284 (355)
Q Consensus       266 ~~~~~~~~---~~~~~~i~~~~  284 (355)
                      +.++..+.   .+..|++.+|.
T Consensus       236 ~~l~~~~~~~~~G~~~~v~gg~  257 (260)
T 3awd_A          236 QFLASDAASLMTGAIVNVDAGF  257 (260)
T ss_dssp             HHHHSGGGTTCCSCEEEESTTT
T ss_pred             HHHhCchhccCCCcEEEECCce
Confidence            99997532   34588998875

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0

Probab=99.86  E-value=1.9e-20  Score=162.21  Aligned_cols=217  Identities=16%  Similarity=0.045  Sum_probs=154.2

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCC-CCCccCCCeeecCCcchhhhcC-------CCcE
Q 018503           48 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-KKTRFFPGVMIAEEPQWRDCIQ-------GSTA  119 (355)
Q Consensus        48 ~~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~-------~~d~  119 (355)
                      ..+++++||||+|+||++++++|+++|++|++++|+.+........ ........+|+.|.+++.++++       ++|+
T Consensus         9 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~   88 (271)
T 3tzq_B            9 LENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASVGRGAVHHVVDLTNEVSVRALIDFTIDTFGRLDI   88 (271)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSCHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCCeEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            3457899999999999999999999999999999988764432111 0011134579999988877775       7899


Q ss_pred             EEECCCCCCC-----CCCChhhHHHHHHHhhhhHHHHHHHH----HcCCCCCCcEEEEeeeeeeeeCCCCCccccCCCCC
Q 018503          120 VVNLAGTPIG-----TRWSSEIKKEIKESRIRVTSKVVDLI----NESPEGVRPSVLVSATALGYYGTSETEVFDESSPS  190 (355)
Q Consensus       120 vi~~a~~~~~-----~~~~~~~~~~~~~~n~~~~~~l~~a~----~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~  190 (355)
                      +||+||....     .....+.+...+++|+.++.++++++    ++  .+..++|++||...  +..         .+.
T Consensus        89 lv~nAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~--~~~g~iv~isS~~~--~~~---------~~~  155 (271)
T 3tzq_B           89 VDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTMLMCKYAIPRLIS--AGGGAIVNISSATA--HAA---------YDM  155 (271)
T ss_dssp             EEECCCCCCTTCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH--TTCEEEEEECCGGG--TSB---------CSS
T ss_pred             EEECCCCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh--cCCCEEEEECCHHH--cCC---------CCC
Confidence            9999997522     13456778899999999999999888    45  46779999999876  321         123


Q ss_pred             CChh-HHHHHHHHHHHHhccC---CCCeEEEEEecEEEeCCCCcccchHHHHH-HHhCCCCCCCCcceecccHHHHHHHH
Q 018503          191 GNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFM-MFAGGPLGSGQQWFSWIHLDDIVNLI  265 (355)
Q Consensus       191 ~~~y-~~k~~~~~~~~~~~~~---~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~v~Dva~~~  265 (355)
                      ...| .+|...+.+.+.+..+   .|+++..++||.++++...... ...... .....+.      ..+...+|+|+++
T Consensus       156 ~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~-~~~~~~~~~~~~~~------~r~~~p~dvA~~v  228 (271)
T 3tzq_B          156 STAYACTKAAIETLTRYVATQYGRHGVRCNAIAPGLVRTPRLEVGL-PQPIVDIFATHHLA------GRIGEPHEIAELV  228 (271)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTC----CHHHHHHHHTTSTT------SSCBCHHHHHHHH
T ss_pred             ChHHHHHHHHHHHHHHHHHHHHhhcCEEEEEEEeCCCcCccccccC-CHHHHHHHHhcCCC------CCCcCHHHHHHHH
Confidence            4568 7887777666655544   5899999999999998643110 011111 1222222      2367899999999


Q ss_pred             HHHHhCCC---CCCceEecCCC
Q 018503          266 YEALSNPS---YRGVINGTAPN  284 (355)
Q Consensus       266 ~~~~~~~~---~~~~~~i~~~~  284 (355)
                      +.++....   .+..+++.+|.
T Consensus       229 ~~L~s~~~~~itG~~i~vdGG~  250 (271)
T 3tzq_B          229 CFLASDRAAFITGQVIAADSGL  250 (271)
T ss_dssp             HHHHSGGGTTCCSCEEEESTTT
T ss_pred             HHHhCcccCCcCCCEEEECCCc
Confidence            99997643   45588888873

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*

Probab=99.85  E-value=7.2e-21  Score=162.54  Aligned_cols=216  Identities=17%  Similarity=0.163  Sum_probs=151.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCc-hhhccC----CCCCCccCCCeeecCCcchhhhcC-------C
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRS-KAELIF----PGKKTRFFPGVMIAEEPQWRDCIQ-------G  116 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~-~~~~~~----~~~~~~~~~~~d~~~~~~~~~~~~-------~  116 (355)
                      ++++++||||+|+||++++++|+++|++|++++|... ......    ..........+|+.|.+++.++++       +
T Consensus         3 ~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   82 (246)
T 3osu_A            3 MTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQFGS   82 (246)
T ss_dssp             CSCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            4578999999999999999999999999999888653 222111    111111134578889888877664       7


Q ss_pred             CcEEEECCCCCCC---CCCChhhHHHHHHHhhhhHHHHHHHH----HcCCCCCCcEEEEeeeeeeeeCCCCCccccCCCC
Q 018503          117 STAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLI----NESPEGVRPSVLVSATALGYYGTSETEVFDESSP  189 (355)
Q Consensus       117 ~d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~----~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~  189 (355)
                      +|++||+||....   ...+.+.+...+++|+.++.++++++    .+  .+..++|++||.... ++          .+
T Consensus        83 id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~--~~~g~iv~isS~~~~-~~----------~~  149 (246)
T 3osu_A           83 LDVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLR--QRSGAIINLSSVVGA-VG----------NP  149 (246)
T ss_dssp             CCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH--HTCEEEEEECCHHHH-HC----------CT
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHH--cCCCEEEEEcchhhc-CC----------CC
Confidence            8999999997532   23456777889999999999999887    44  456789999997662 22          12


Q ss_pred             CCChh-HHHHHHHHHHHHhcc---CCCCeEEEEEecEEEeCCCCcccchHHHHHHHhCCCCCCCCcceecccHHHHHHHH
Q 018503          190 SGNDY-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLI  265 (355)
Q Consensus       190 ~~~~y-~~k~~~~~~~~~~~~---~~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~  265 (355)
                      ....| .+|...+.+.+.+..   ..|+++..++||.+.++......... ........++      ..+.+.+|+|+++
T Consensus       150 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~-~~~~~~~~p~------~r~~~~~dva~~v  222 (246)
T 3osu_A          150 GQANYVATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDMTDALSDEL-KEQMLTQIPL------ARFGQDTDIANTV  222 (246)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBGGGCCSCSCHHH-HHHHHTTCTT------CSCBCHHHHHHHH
T ss_pred             CChHHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECCCcCCcccccCHHH-HHHHHhcCCC------CCCcCHHHHHHHH
Confidence            34568 788766666555444   35899999999999987643321111 0122222222      3478899999999


Q ss_pred             HHHHhCCC---CCCceEecCCC
Q 018503          266 YEALSNPS---YRGVINGTAPN  284 (355)
Q Consensus       266 ~~~~~~~~---~~~~~~i~~~~  284 (355)
                      +.++..+.   .+..|++.+|.
T Consensus       223 ~~l~s~~~~~itG~~i~vdgG~  244 (246)
T 3osu_A          223 AFLASDKAKYITGQTIHVNGGM  244 (246)
T ss_dssp             HHHTSGGGTTCCSCEEEESTTS
T ss_pred             HHHhCccccCCCCCEEEeCCCc
Confidence            99997643   35589998874

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*

Probab=99.85  E-value=2.5e-21  Score=165.69  Aligned_cols=218  Identities=17%  Similarity=0.080  Sum_probs=147.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCC-----CCCccCCCeeecCCcchhhhcC-------C
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-----KKTRFFPGVMIAEEPQWRDCIQ-------G  116 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-----~~~~~~~~~d~~~~~~~~~~~~-------~  116 (355)
                      ++++|+||||+|+||++++++|+++|++|++++|+.+........     ........+|+.|++++.++++       +
T Consensus         6 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   85 (248)
T 2pnf_A            6 QGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAHGVEMNLLSEESINKAFEEIYNLVDG   85 (248)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHSSC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhcCCceEEEEccCCCHHHHHHHHHHHHHhcCC
Confidence            457899999999999999999999999999999987654322100     0001134568888888877775       7


Q ss_pred             CcEEEECCCCCCC---CCCChhhHHHHHHHhhhhHHHHHHHHHcC--CCCCCcEEEEeeeeeeeeCCCCCccccCCCCCC
Q 018503          117 STAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSG  191 (355)
Q Consensus       117 ~d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~  191 (355)
                      +|+|||+||....   .....+.+...+++|+.++.++++++...  +.+.+++|++||.... ++.          +..
T Consensus        86 ~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~-~~~----------~~~  154 (248)
T 2pnf_A           86 IDILVNNAGITRDKLFLRMSLLDWEEVLKVNLTGTFLVTQNSLRKMIKQRWGRIVNISSVVGF-TGN----------VGQ  154 (248)
T ss_dssp             CSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHCHHHHHHTCEEEEEECCHHHH-HCC----------TTC
T ss_pred             CCEEEECCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhc-CCC----------CCC
Confidence            9999999997532   23356677889999999997766654321  0366899999997541 331          223


Q ss_pred             Chh-HHHHHHHHHHHHhcc---CCCCeEEEEEecEEEeCCCCcccchHHHHHHHhCCCCCCCCcceecccHHHHHHHHHH
Q 018503          192 NDY-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYE  267 (355)
Q Consensus       192 ~~y-~~k~~~~~~~~~~~~---~~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~  267 (355)
                      ..| .+|...+.....+..   ..++++++++|+.++++.......... .......+.      ..+++++|+|++++.
T Consensus       155 ~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~-~~~~~~~~~------~~~~~~~dva~~~~~  227 (248)
T 2pnf_A          155 VNYSTTKAGLIGFTKSLAKELAPRNVLVNAVAPGFIETDMTAVLSEEIK-QKYKEQIPL------GRFGSPEEVANVVLF  227 (248)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGSCHHHH-HHHHHTCTT------SSCBCHHHHHHHHHH
T ss_pred             chHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeceecCchhhhccHHHH-HHHHhcCCC------CCccCHHHHHHHHHH
Confidence            457 777666555544433   248999999999999875332211110 011122221      347899999999999


Q ss_pred             HHhCCC---CCCceEecCCC
Q 018503          268 ALSNPS---YRGVINGTAPN  284 (355)
Q Consensus       268 ~~~~~~---~~~~~~i~~~~  284 (355)
                      ++....   .+..|++.+|.
T Consensus       228 l~~~~~~~~~G~~~~v~gg~  247 (248)
T 2pnf_A          228 LCSELASYITGEVIHVNGGM  247 (248)
T ss_dssp             HHSGGGTTCCSCEEEESTTC
T ss_pred             HhCchhhcCCCcEEEeCCCc
Confidence            997532   35588888763

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A

Probab=99.85  E-value=2.5e-21  Score=167.47  Aligned_cols=218  Identities=12%  Similarity=0.047  Sum_probs=138.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCC----CCCCccCCCeeecCCcchhhhc--------CC
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP----GKKTRFFPGVMIAEEPQWRDCI--------QG  116 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~~d~~~~~~~~~~~--------~~  116 (355)
                      .+++|+||||+|+||+++++.|+++|++|++++|+.+.......    .........+|+.|.+++.+++        .+
T Consensus        13 ~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   92 (266)
T 1xq1_A           13 KAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMFGGK   92 (266)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHTTC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence            34789999999999999999999999999999998765432210    0000113346888888777666        57


Q ss_pred             CcEEEECCCCCCC---CCCChhhHHHHHHHhhhhHHHHHHHH----HcCCCCCCcEEEEeeeeeeeeCCCCCccccCCCC
Q 018503          117 STAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLI----NESPEGVRPSVLVSATALGYYGTSETEVFDESSP  189 (355)
Q Consensus       117 ~d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~----~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~  189 (355)
                      +|+|||+||....   ...+.+.+...+++|+.++.++++++    ++  .+.+++|++||...  +..         .+
T Consensus        93 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~--~~~~~iv~isS~~~--~~~---------~~  159 (266)
T 1xq1_A           93 LDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKA--SGCGNIIFMSSIAG--VVS---------AS  159 (266)
T ss_dssp             CSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HSSCEEEEEC--------------------
T ss_pred             CcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHh--cCCcEEEEEccchh--ccC---------CC
Confidence            8999999997432   23456777889999999999999888    34  46789999999876  331         12


Q ss_pred             CCChh-HHHHHHHHHHHHhccC---CCCeEEEEEecEEEeCCCCcccchHHHHHHHhCCCCCCCCcceecccHHHHHHHH
Q 018503          190 SGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLI  265 (355)
Q Consensus       190 ~~~~y-~~k~~~~~~~~~~~~~---~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~  265 (355)
                      ....| .+|...+.+...+..+   .|++++++||+.++++......  .+.+.    ..+........+++.+|+|+++
T Consensus       160 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~--~~~~~----~~~~~~~~~~~~~~~~dva~~~  233 (266)
T 1xq1_A          160 VGSIYSATKGALNQLARNLACEWASDGIRANAVAPAVIATPLAEAVY--DDEFK----KVVISRKPLGRFGEPEEVSSLV  233 (266)
T ss_dssp             -CCHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC-------------------------------CCGGGGHHHH
T ss_pred             CCchHHHHHHHHHHHHHHHHHHHhHhCcEEEEEeeCCCccchhhhhc--CHHHH----HHHHhcCCCCCCcCHHHHHHHH
Confidence            34568 7787766666554433   4899999999999998543210  00000    0000011112478999999999


Q ss_pred             HHHHhCCC---CCCceEecCCCc
Q 018503          266 YEALSNPS---YRGVINGTAPNP  285 (355)
Q Consensus       266 ~~~~~~~~---~~~~~~i~~~~~  285 (355)
                      +.++..+.   .+..+++.+|..
T Consensus       234 ~~l~~~~~~~~~G~~~~v~gG~~  256 (266)
T 1xq1_A          234 AFLCMPAASYITGQTICVDGGLT  256 (266)
T ss_dssp             HHHTSGGGTTCCSCEEECCCCEE
T ss_pred             HHHcCccccCccCcEEEEcCCcc
Confidence            99987532   345888888753

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}

Probab=99.85  E-value=7.1e-21  Score=164.32  Aligned_cols=220  Identities=15%  Similarity=0.053  Sum_probs=150.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCC-CccCCCeeecCCcchhhhcC-------CCcEE
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKK-TRFFPGVMIAEEPQWRDCIQ-------GSTAV  120 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~d~~~~~~~~~~~~-------~~d~v  120 (355)
                      ..|+||||||+|+||++++++|+++|++|++++|+.+.......... ......+|+.|++++.++++       ++|+|
T Consensus        11 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~~g~iD~l   90 (263)
T 3ak4_A           11 SGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLENGGFAVEVDVTKRASVDAAMQKAIDALGGFDLL   90 (263)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCTTCCEEEECCTTCHHHHHHHHHHHHHHHTCCCEE
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            35799999999999999999999999999999998765443211100 01134578999888887775       79999


Q ss_pred             EECCCCCCC---CCCChhhHHHHHHHhhhhHHHHHHHHHcC--CCC-CCcEEEEeeeeeeeeCCCCCccccCCCCCCChh
Q 018503          121 VNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEG-VRPSVLVSATALGYYGTSETEVFDESSPSGNDY  194 (355)
Q Consensus       121 i~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~-~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~~y  194 (355)
                      ||+||....   .....+.+...+++|+.++.++++++...  ..+ .+++|++||...  +..         .+....|
T Consensus        91 v~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~--~~~---------~~~~~~Y  159 (263)
T 3ak4_A           91 CANAGVSTMRPAVDITDEEWDFNFDVNARGVFLANQIACRHFLASNTKGVIVNTASLAA--KVG---------APLLAHY  159 (263)
T ss_dssp             EECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGG--TSC---------CTTCHHH
T ss_pred             EECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEeccccc--ccC---------CCCchhH
Confidence            999997532   23355677889999999999988876541  123 578999999765  321         2234567


Q ss_pred             -HHHHHHHHHHHHhccC---CCCeEEEEEecEEEeCCCCcccc----h-----HHHH-HHHhCCCCCCCCcceecccHHH
Q 018503          195 -LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAK----M-----IPLF-MMFAGGPLGSGQQWFSWIHLDD  260 (355)
Q Consensus       195 -~~k~~~~~~~~~~~~~---~~~~~~i~Rp~~i~G~~~~~~~~----~-----~~~~-~~~~~~~~~~~~~~~~~i~v~D  260 (355)
                       .+|...+.+.+.+..+   .|+++++++|+.++++.......    .     .... ......+      ...+++.+|
T Consensus       160 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p------~~~~~~~~d  233 (263)
T 3ak4_A          160 SASKFAVFGWTQALAREMAPKNIRVNCVCPGFVKTAMQEREIIWEAELRGMTPEAVRAEYVSLTP------LGRIEEPED  233 (263)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBTTHHHHHHHHHHHHHHTSCHHHHHHHHHHTCT------TCSCBCHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhHcCeEEEEEecccccChhhhhhccccccccccCcHHHHHHHHhcCC------CCCCcCHHH
Confidence             7777666555544332   48999999999998764211100    0     0001 1112212      234899999


Q ss_pred             HHHHHHHHHhCCC---CCCceEecCCCc
Q 018503          261 IVNLIYEALSNPS---YRGVINGTAPNP  285 (355)
Q Consensus       261 va~~~~~~~~~~~---~~~~~~i~~~~~  285 (355)
                      +|++++.++..+.   .+..|++.+|..
T Consensus       234 vA~~v~~l~s~~~~~~tG~~~~vdgG~~  261 (263)
T 3ak4_A          234 VADVVVFLASDAARFMTGQGINVTGGVR  261 (263)
T ss_dssp             HHHHHHHHHSGGGTTCCSCEEEESSSSS
T ss_pred             HHHHHHHHhCccccCCCCCEEEECcCEe
Confidence            9999999997642   345899988753

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*

Probab=99.85  E-value=8.3e-21  Score=163.46  Aligned_cols=212  Identities=12%  Similarity=0.084  Sum_probs=148.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCC-CccCCCeeecCCcchhhhcC-------CCcEE
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKK-TRFFPGVMIAEEPQWRDCIQ-------GSTAV  120 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~d~~~~~~~~~~~~-------~~d~v  120 (355)
                      ++++|+||||+|+||++++++|+++|++|++++|+.+.......... ......+|+.|++++.++++       ++|++
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD~l   85 (260)
T 1nff_A            6 TGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADAARYVHLDVTQPAQWKAAVDTAVTAFGGLHVL   85 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhcCceEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            45789999999999999999999999999999998765433211100 00134578889888887775       79999


Q ss_pred             EECCCCCCC---CCCChhhHHHHHHHhhhhHHHHHHHH----HcCCCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCCh
Q 018503          121 VNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLI----NESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGND  193 (355)
Q Consensus       121 i~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~----~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~~  193 (355)
                      ||+||....   .....+.+...+++|+.++..+++++    ++  .+.+++|++||...  +..         .+....
T Consensus        86 v~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~--~~~g~iv~isS~~~--~~~---------~~~~~~  152 (260)
T 1nff_A           86 VNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKE--AGRGSIINISSIEG--LAG---------TVACHG  152 (260)
T ss_dssp             EECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHH--HTCEEEEEECCGGG--TSC---------CTTBHH
T ss_pred             EECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHh--cCCCEEEEEeehhh--cCC---------CCCchh
Confidence            999997532   23456777889999999996665544    44  45679999999876  331         123346


Q ss_pred             h-HHHHHHHHHHHHhccC---CCCeEEEEEecEEEeCCCCcccchHHHHHHHhCCCCCCCCcceecccHHHHHHHHHHHH
Q 018503          194 Y-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEAL  269 (355)
Q Consensus       194 y-~~k~~~~~~~~~~~~~---~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~  269 (355)
                      | .+|...+.+...+..+   .|++++++|||.++++... ..          ...+. ......+.+.+|+|++++.++
T Consensus       153 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~-~~----------~~~~~-~~~~~~~~~~~dvA~~v~~l~  220 (260)
T 1nff_A          153 YTATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMTD-WV----------PEDIF-QTALGRAAEPVEVSNLVVYLA  220 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSGGGT-TS----------CTTCS-CCSSSSCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCCCCccc-cc----------hhhHH-hCccCCCCCHHHHHHHHHHHh
Confidence            7 7777666665554433   5899999999999987532 10          00000 111234789999999999999


Q ss_pred             hCCC---CCCceEecCCCc
Q 018503          270 SNPS---YRGVINGTAPNP  285 (355)
Q Consensus       270 ~~~~---~~~~~~i~~~~~  285 (355)
                      ..+.   .+..|++.+|..
T Consensus       221 s~~~~~~~G~~~~v~gG~~  239 (260)
T 1nff_A          221 SDESSYSTGAEFVVDGGTV  239 (260)
T ss_dssp             SGGGTTCCSCEEEESTTGG
T ss_pred             CccccCCcCCEEEECCCee
Confidence            7543   355888888753

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2

Probab=99.85  E-value=2.9e-21  Score=167.79  Aligned_cols=218  Identities=18%  Similarity=0.026  Sum_probs=149.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEec-CCchhhccC----CCCCCccCCCeeecCCcchhhhcC-------C
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTR-SRSKAELIF----PGKKTRFFPGVMIAEEPQWRDCIQ-------G  116 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r-~~~~~~~~~----~~~~~~~~~~~d~~~~~~~~~~~~-------~  116 (355)
                      ..|+|+||||+|+||++++++|+++|++|++++| +.+......    ..........+|+.|++++.++++       +
T Consensus        20 ~~k~vlItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   99 (274)
T 1ja9_A           20 AGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHFGG   99 (274)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            3578999999999999999999999999999999 443322211    001001134578889888887775       7


Q ss_pred             CcEEEECCCCCCC---CCCChhhHHHHHHHhhhhHHHHHHHHHcC-CCCCCcEEEEeeeeeeee-CCCCCccccCCCCCC
Q 018503          117 STAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES-PEGVRPSVLVSATALGYY-GTSETEVFDESSPSG  191 (355)
Q Consensus       117 ~d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~~~~~~v~~Ss~~~~~y-g~~~~~~~~e~~~~~  191 (355)
                      +|+|||+||....   .....+.+...+++|+.++.++++++... ..+ +++|++||...  + ..         .+..
T Consensus       100 ~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~iv~~sS~~~--~~~~---------~~~~  167 (274)
T 1ja9_A          100 LDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRG-GRIILTSSIAA--VMTG---------IPNH  167 (274)
T ss_dssp             EEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEE-EEEEEECCGGG--TCCS---------CCSC
T ss_pred             CCEEEECCCCCCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhC-CEEEEEcChHh--ccCC---------CCCC
Confidence            8999999997532   13456667889999999999999988662 113 68999999876  4 21         1234


Q ss_pred             Chh-HHHHHHHHHHHHhccC---CCCeEEEEEecEEEeCCCCcc-c--------chH-HHH--HHHhCCCCCCCCcceec
Q 018503          192 NDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGAL-A--------KMI-PLF--MMFAGGPLGSGQQWFSW  255 (355)
Q Consensus       192 ~~y-~~k~~~~~~~~~~~~~---~~~~~~i~Rp~~i~G~~~~~~-~--------~~~-~~~--~~~~~~~~~~~~~~~~~  255 (355)
                      ..| .+|...+.+...+..+   .++++++++||.++++..... .        .+. ...  ....+.      ....+
T Consensus       168 ~~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~  241 (274)
T 1ja9_A          168 ALYAGSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMN------PLKRI  241 (274)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTTCCHHHHHHHHHHTS------TTSSC
T ss_pred             chHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccccchhcccccccccccccCchHHHHHHHHhcC------CCCCc
Confidence            567 7787777666555443   489999999999987632100 0        000 111  111222      23458


Q ss_pred             ccHHHHHHHHHHHHhCCC---CCCceEecCCC
Q 018503          256 IHLDDIVNLIYEALSNPS---YRGVINGTAPN  284 (355)
Q Consensus       256 i~v~Dva~~~~~~~~~~~---~~~~~~i~~~~  284 (355)
                      ++++|+|++++.++..+.   .+..|++.+|.
T Consensus       242 ~~~~dva~~i~~l~~~~~~~~~G~~~~v~gG~  273 (274)
T 1ja9_A          242 GYPADIGRAVSALCQEESEWINGQVIKLTGGG  273 (274)
T ss_dssp             BCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             cCHHHHHHHHHHHhCcccccccCcEEEecCCc
Confidence            999999999999997643   35589998763

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*

Probab=99.85  E-value=5.8e-21  Score=164.03  Aligned_cols=219  Identities=12%  Similarity=0.042  Sum_probs=147.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCC-CCCc-cCCCeeecCCcchhhhc------CCCcEE
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-KKTR-FFPGVMIAEEPQWRDCI------QGSTAV  120 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~-~~~~~d~~~~~~~~~~~------~~~d~v  120 (355)
                      ++++|+||||+|+||++++++|+++|++|++++|+.++....... .... ....+|+.|.+++.+++      .++|+|
T Consensus        10 ~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~id~l   89 (254)
T 2wsb_A           10 DGACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQELGAAVAARIVADVTDAEAMTAAAAEAEAVAPVSIL   89 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEEECCTTCHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcccceeEEEEecCCHHHHHHHHHHHHhhCCCcEE
Confidence            347899999999999999999999999999999987654322110 0000 13446888888887765      478999


Q ss_pred             EECCCCCCC---CCCChhhHHHHHHHhhhhHHHHHHHH----HcCCCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCCh
Q 018503          121 VNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLI----NESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGND  193 (355)
Q Consensus       121 i~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~----~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~~  193 (355)
                      ||+||....   .....+.....+++|+.++.++++++    ++  .+.+++|++||...  +.....       .+...
T Consensus        90 i~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~~~~~iv~isS~~~--~~~~~~-------~~~~~  158 (254)
T 2wsb_A           90 VNSAGIARLHDALETDDATWRQVMAVNVDGMFWASRAFGRAMVA--RGAGAIVNLGSMSG--TIVNRP-------QFASS  158 (254)
T ss_dssp             EECCCCCCCBCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH--HTCEEEEEECCGGG--TSCCSS-------SCBHH
T ss_pred             EECCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh--cCCcEEEEEecchh--ccCCCC-------CcchH
Confidence            999997533   22345666788999999977776655    33  35789999999876  432111       11246


Q ss_pred             h-HHHHHHHHHHHHhccC---CCCeEEEEEecEEEeCCCCcccchHHHH-HHHhCCCCCCCCcceecccHHHHHHHHHHH
Q 018503          194 Y-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLF-MMFAGGPLGSGQQWFSWIHLDDIVNLIYEA  268 (355)
Q Consensus       194 y-~~k~~~~~~~~~~~~~---~~~~~~i~Rp~~i~G~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~  268 (355)
                      | .+|...+.....+..+   .+++++++||+.++++............ ......+.      ..+++++|+|++++.+
T Consensus       159 Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~dva~~~~~l  232 (254)
T 2wsb_A          159 YMASKGAVHQLTRALAAEWAGRGVRVNALAPGYVATEMTLKMRERPELFETWLDMTPM------GRCGEPSEIAAAALFL  232 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHHHHHTCHHHHHHHHHTSTT------SSCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhhcCeEEEEEEecccCchhhhccccChHHHHHHHhcCCC------CCCCCHHHHHHHHHHH
Confidence            7 7777766665554433   4899999999999987422110000111 11222221      3478999999999999


Q ss_pred             HhCCC---CCCceEecCCC
Q 018503          269 LSNPS---YRGVINGTAPN  284 (355)
Q Consensus       269 ~~~~~---~~~~~~i~~~~  284 (355)
                      +..+.   .+..+++.+|.
T Consensus       233 ~~~~~~~~~G~~~~v~gG~  251 (254)
T 2wsb_A          233 ASPAASYVTGAILAVDGGY  251 (254)
T ss_dssp             HSGGGTTCCSCEEEESTTG
T ss_pred             hCcccccccCCEEEECCCE
Confidence            97532   34578887763

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.85  E-value=4.3e-21  Score=164.93  Aligned_cols=223  Identities=12%  Similarity=0.042  Sum_probs=149.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcC-------CCcEEE
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ-------GSTAVV  121 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-------~~d~vi  121 (355)
                      ++++|+||||+|+||++++++|+++|++|++++|+.+. ......... ....+|+.|++++.++++       ++|++|
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-~~~~~~~~~-~~~~~D~~~~~~~~~~~~~~~~~~g~iD~lv   82 (256)
T 2d1y_A            5 AGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEG-KEVAEAIGG-AFFQVDLEDERERVRFVEEAAYALGRVDVLV   82 (256)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTH-HHHHHHHTC-EEEECCTTCHHHHHHHHHHHHHHHSCCCEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhH-HHHHHHhhC-CEEEeeCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            35789999999999999999999999999999998765 322110000 144579999887776664       689999


Q ss_pred             ECCCCCCC---CCCChhhHHHHHHHhhhhHHHHHHHHHcC--CCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCChh-H
Q 018503          122 NLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-L  195 (355)
Q Consensus       122 ~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~~y-~  195 (355)
                      |+||....   .....+.+...+++|+.++.++++++...  ..+.+++|++||...  +..         .+....| .
T Consensus        83 ~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~--~~~---------~~~~~~Y~~  151 (256)
T 2d1y_A           83 NNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQG--LFA---------EQENAAYNA  151 (256)
T ss_dssp             ECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGG--TSB---------CTTBHHHHH
T ss_pred             ECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccccc--cCC---------CCCChhHHH
Confidence            99997532   23345677889999999999998876431  145689999999765  221         1234467 7


Q ss_pred             HHHHHHHHHHHhccC---CCCeEEEEEecEEEeCCCCcccchHHHHHHHhCCC---CCCCCcceecccHHHHHHHHHHHH
Q 018503          196 AEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGP---LGSGQQWFSWIHLDDIVNLIYEAL  269 (355)
Q Consensus       196 ~k~~~~~~~~~~~~~---~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~i~v~Dva~~~~~~~  269 (355)
                      +|...+.+.+.+..+   .+++++.++||.+.++....   .... .......   +........+++.+|+|++++.++
T Consensus       152 sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~---~~~~-~~~~~~~~~~~~~~~~~~~~~~~~dvA~~~~~l~  227 (256)
T 2d1y_A          152 SKGGLVNLTRSLALDLAPLRIRVNAVAPGAIATEAVLE---AIAL-SPDPERTRRDWEDLHALRRLGKPEEVAEAVLFLA  227 (256)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHH---HHC---------CHHHHTTSTTSSCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhcCeEEEEEeeCCccCchhhh---cccc-ccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHh
Confidence            787666655544432   48999999999987652110   0000 0000000   011122345899999999999999


Q ss_pred             hCCC---CCCceEecCCCccCH
Q 018503          270 SNPS---YRGVINGTAPNPVRL  288 (355)
Q Consensus       270 ~~~~---~~~~~~i~~~~~~s~  288 (355)
                      ..+.   .+..+++.+|...++
T Consensus       228 s~~~~~~~G~~~~v~gG~~~~~  249 (256)
T 2d1y_A          228 SEKASFITGAILPVDGGMTASF  249 (256)
T ss_dssp             SGGGTTCCSCEEEESTTGGGBC
T ss_pred             CchhcCCCCCEEEECCCccccc
Confidence            7642   345899988865543

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.85  E-value=6.5e-21  Score=162.44  Aligned_cols=213  Identities=17%  Similarity=0.108  Sum_probs=148.4

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcC------CCcEEEEC
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ------GSTAVVNL  123 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~------~~d~vi~~  123 (355)
                      +|+|+||||+|+||++++++|+++|++|++++|+.+ ....       ....+|+.|.+++.++++      ++|++||+
T Consensus         2 ~k~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~-~~~~-------~~~~~D~~~~~~~~~~~~~~~~~~~~d~li~~   73 (242)
T 1uay_A            2 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRRE-GEDL-------IYVEGDVTREEDVRRAVARAQEEAPLFAVVSA   73 (242)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCC-SSSS-------EEEECCTTCHHHHHHHHHHHHHHSCEEEEEEC
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEccCcc-ccce-------EEEeCCCCCHHHHHHHHHHHHhhCCceEEEEc
Confidence            478999999999999999999999999999999876 2111       145579999998888776      78999999


Q ss_pred             CCCCCCCC-------CChhhHHHHHHHhhhhHHHHHHHHHcC-C-CC------CCcEEEEeeeeeeeeCCCCCccccCCC
Q 018503          124 AGTPIGTR-------WSSEIKKEIKESRIRVTSKVVDLINES-P-EG------VRPSVLVSATALGYYGTSETEVFDESS  188 (355)
Q Consensus       124 a~~~~~~~-------~~~~~~~~~~~~n~~~~~~l~~a~~~~-~-~~------~~~~v~~Ss~~~~~yg~~~~~~~~e~~  188 (355)
                      ||......       ...+.+...+++|+.++.++++++... . .+      .+++|++||...  +..         .
T Consensus        74 ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~--~~~---------~  142 (242)
T 1uay_A           74 AGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAA--FEG---------Q  142 (242)
T ss_dssp             CCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHH--HHC---------C
T ss_pred             ccccCcccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhh--ccC---------C
Confidence            99753211       112367889999999999999987652 1 11      238999999876  432         1


Q ss_pred             CCCChh-HHHHHHHHHHHHhcc---CCCCeEEEEEecEEEeCCCCcccchHHHHHHHhCCCCCCCCcceecccHHHHHHH
Q 018503          189 PSGNDY-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNL  264 (355)
Q Consensus       189 ~~~~~y-~~k~~~~~~~~~~~~---~~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~  264 (355)
                      +....| .+|...+...+.+..   ..|++++++||+.++++......... ........++     ...+++++|+|++
T Consensus       143 ~~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~-~~~~~~~~~~-----~~~~~~~~dva~~  216 (242)
T 1uay_A          143 IGQAAYAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQGLPEKA-KASLAAQVPF-----PPRLGRPEEYAAL  216 (242)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHTSCHHH-HHHHHTTCCS-----SCSCCCHHHHHHH
T ss_pred             CCCchhhHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccCcchhhhccchhH-HHHHHhhCCC-----cccCCCHHHHHHH
Confidence            234567 777666655544433   24899999999999987432111100 0111222222     0247899999999


Q ss_pred             HHHHHhCCC-CCCceEecCCCccC
Q 018503          265 IYEALSNPS-YRGVINGTAPNPVR  287 (355)
Q Consensus       265 ~~~~~~~~~-~~~~~~i~~~~~~s  287 (355)
                      ++.++.... .+..|++.+|..++
T Consensus       217 ~~~l~~~~~~~G~~~~v~gG~~~~  240 (242)
T 1uay_A          217 VLHILENPMLNGEVVRLDGALRMA  240 (242)
T ss_dssp             HHHHHHCTTCCSCEEEESTTCCCC
T ss_pred             HHHHhcCCCCCCcEEEEcCCeecC
Confidence            999998744 35589998886543

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A

Probab=99.85  E-value=9.4e-21  Score=162.41  Aligned_cols=219  Identities=15%  Similarity=0.072  Sum_probs=146.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCC---CCCCccCCCeeecCCcchhhhcC-------CCc
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP---GKKTRFFPGVMIAEEPQWRDCIQ-------GST  118 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~---~~~~~~~~~~d~~~~~~~~~~~~-------~~d  118 (355)
                      ..++|+||||+|+||++++++|+++|++|++++|+.+.......   .........+|+.|.+++.++++       .+|
T Consensus         5 ~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   84 (251)
T 1zk4_A            5 DGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAFGPVS   84 (251)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSSCC
T ss_pred             CCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhccCceEEEECCCCCHHHHHHHHHHHHHHhCCCC
Confidence            45789999999999999999999999999999998764432211   00001134578888888877664       589


Q ss_pred             EEEECCCCCCC---CCCChhhHHHHHHHhhhhHHHHHHHHHcC--CCCC-CcEEEEeeeeeeeeCCCCCccccCCCCCCC
Q 018503          119 AVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGV-RPSVLVSATALGYYGTSETEVFDESSPSGN  192 (355)
Q Consensus       119 ~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~-~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~  192 (355)
                      +|||+||....   .....+.+...+++|+.++..+.+++...  ..+. +++|++||...  +..         .+...
T Consensus        85 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~--~~~---------~~~~~  153 (251)
T 1zk4_A           85 TLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEG--FVG---------DPSLG  153 (251)
T ss_dssp             EEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGG--TSC---------CTTCH
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCCchh--ccC---------CCCCc
Confidence            99999997532   23456677889999999877766554321  1455 78999999876  432         12345


Q ss_pred             hh-HHHHHHHHHHHHhcc-----CCCCeEEEEEecEEEeCCCCcccchHHHHHHHhCCCCCCCCcceecccHHHHHHHHH
Q 018503          193 DY-LAEVCREWEGTALKV-----NKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIY  266 (355)
Q Consensus       193 ~y-~~k~~~~~~~~~~~~-----~~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~  266 (355)
                      .| .+|...+.+...+..     ..+++++++||+.++++.......  ......    +........+++.+|+|++++
T Consensus       154 ~Y~~sK~a~~~~~~~~a~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~--~~~~~~----~~~~~~~~~~~~~~dva~~~~  227 (251)
T 1zk4_A          154 AYNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDLPG--AEEAMS----QRTKTPMGHIGEPNDIAYICV  227 (251)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHTSTT--HHHHHT----STTTCTTSSCBCHHHHHHHHH
T ss_pred             cchHHHHHHHHHHHHHHHHhcccCCCeEEEEEeeCcCcchhhhhcCc--hhhhHH----HhhcCCCCCCcCHHHHHHHHH
Confidence            67 777766655544332     468999999999999874221110  111100    111111234899999999999


Q ss_pred             HHHhCCC---CCCceEecCCC
Q 018503          267 EALSNPS---YRGVINGTAPN  284 (355)
Q Consensus       267 ~~~~~~~---~~~~~~i~~~~  284 (355)
                      .++..+.   .+..+++.+|.
T Consensus       228 ~l~~~~~~~~~G~~~~v~gG~  248 (251)
T 1zk4_A          228 YLASNESKFATGSEFVVDGGY  248 (251)
T ss_dssp             HHHSGGGTTCCSCEEEESTTG
T ss_pred             HHcCcccccccCcEEEECCCc
Confidence            9997543   35588888775

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}

Probab=99.85  E-value=3.2e-20  Score=159.57  Aligned_cols=220  Identities=15%  Similarity=0.051  Sum_probs=147.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCC-CCccCCCeeecCCcchhhhcC-------CCcEE
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGK-KTRFFPGVMIAEEPQWRDCIQ-------GSTAV  120 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~~-------~~d~v  120 (355)
                      .+++++||||+|+||++++++|+++|++|++++|+.+......... .......+|+.|.+++.++++       ++|++
T Consensus         6 ~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~l   85 (257)
T 3tpc_A            6 KSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAELGAAVRFRNADVTNEADATAALAFAKQEFGHVHGL   85 (257)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSCC------------CEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            3478999999999999999999999999999999887654433221 111134578889888877764       79999


Q ss_pred             EECCCCCCCC-------CCChhhHHHHHHHhhhhHHHHHHHHHcC-C-------CCCCcEEEEeeeeeeeeCCCCCcccc
Q 018503          121 VNLAGTPIGT-------RWSSEIKKEIKESRIRVTSKVVDLINES-P-------EGVRPSVLVSATALGYYGTSETEVFD  185 (355)
Q Consensus       121 i~~a~~~~~~-------~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~-------~~~~~~v~~Ss~~~~~yg~~~~~~~~  185 (355)
                      ||+||.....       ....+.+...+++|+.++..+++++... .       .+..++|++||...  +..       
T Consensus        86 v~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~~~g~iv~isS~~~--~~~-------  156 (257)
T 3tpc_A           86 VNCAGTAPGEKILGRSGPHALDSFARTVAVNLIGTFNMIRLAAEVMSQGEPDADGERGVIVNTASIAA--FDG-------  156 (257)
T ss_dssp             EECCCCCCCCCSEETTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHH--HHC-------
T ss_pred             EECCCCCCCCccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccccCCCCCeEEEEEechhh--ccC-------
Confidence            9999975321       3446778899999999999999887652 1       14567999999876  321       


Q ss_pred             CCCCCCChh-HHHHHHHHHHHHhccC---CCCeEEEEEecEEEeCCCCcccchHHHH-H-HHhCCCCCCCCcceecccHH
Q 018503          186 ESSPSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLF-M-MFAGGPLGSGQQWFSWIHLD  259 (355)
Q Consensus       186 e~~~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~i~Rp~~i~G~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~i~v~  259 (355)
                        .+....| .+|...+.+.+.+..+   .|+++..++||.+.++.....   .... . .....++     ...+...+
T Consensus       157 --~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~---~~~~~~~~~~~~p~-----~~r~~~~~  226 (257)
T 3tpc_A          157 --QIGQAAYAASKGGVAALTLPAARELARFGIRVVTIAPGIFDTPMMAGM---PQDVQDALAASVPF-----PPRLGRAE  226 (257)
T ss_dssp             --CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSCC-----------------CCSSS-----SCSCBCHH
T ss_pred             --CCCCcchHHHHHHHHHHHHHHHHHHHHcCeEEEEEEeCCCCChhhccC---CHHHHHHHHhcCCC-----CCCCCCHH
Confidence              1234567 7787666665544443   589999999999988753221   1101 1 1111111     13478999


Q ss_pred             HHHHHHHHHHhCCC-CCCceEecCCCccC
Q 018503          260 DIVNLIYEALSNPS-YRGVINGTAPNPVR  287 (355)
Q Consensus       260 Dva~~~~~~~~~~~-~~~~~~i~~~~~~s  287 (355)
                      |+|++++.++.... .+..+++.+|..++
T Consensus       227 dva~~v~~l~s~~~itG~~i~vdGG~~~~  255 (257)
T 3tpc_A          227 EYAALVKHICENTMLNGEVIRLDGALRMA  255 (257)
T ss_dssp             HHHHHHHHHHHCTTCCSCEEEESTTCCC-
T ss_pred             HHHHHHHHHcccCCcCCcEEEECCCccCC
Confidence            99999999998744 45588888876544

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0

Probab=99.84  E-value=9.3e-21  Score=165.17  Aligned_cols=224  Identities=13%  Similarity=0.074  Sum_probs=153.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchh------------hcc----CCCCCCccCCCeeecCCcchhh
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKA------------ELI----FPGKKTRFFPGVMIAEEPQWRD  112 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~------------~~~----~~~~~~~~~~~~d~~~~~~~~~  112 (355)
                      ..++++||||+|+||++++++|+++|++|++++|+....            ...    ...........+|+.|++++.+
T Consensus         9 ~~k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~   88 (281)
T 3s55_A            9 EGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVDVKDRAALES   88 (281)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHH
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHH
Confidence            457999999999999999999999999999999974321            100    0001111133578889888877


Q ss_pred             hcC-------CCcEEEECCCCCCC---CCCChhhHHHHHHHhhhhHHHHHHHHHcC--CCCCCcEEEEeeeeeeeeCCCC
Q 018503          113 CIQ-------GSTAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSE  180 (355)
Q Consensus       113 ~~~-------~~d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~~~~v~~Ss~~~~~yg~~~  180 (355)
                      +++       ++|++||+||....   ...+.+.+...+++|+.++.++++++...  ..+..++|++||...  +..  
T Consensus        89 ~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~--~~~--  164 (281)
T 3s55_A           89 FVAEAEDTLGGIDIAITNAGISTIALLPEVESAQWDEVIGTNLTGTFNTIAAVAPGMIKRNYGRIVTVSSMLG--HSA--  164 (281)
T ss_dssp             HHHHHHHHHTCCCEEEECCCCCCCCCTTCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGG--GSC--
T ss_pred             HHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhh--cCC--
Confidence            664       79999999997532   34466778899999999999999885321  035678999999876  321  


Q ss_pred             CccccCCCCCCChh-HHHHHHHHHHHHhccC---CCCeEEEEEecEEEeCCCCccc---chHHH--------H-HHHhCC
Q 018503          181 TEVFDESSPSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALA---KMIPL--------F-MMFAGG  244 (355)
Q Consensus       181 ~~~~~e~~~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~i~Rp~~i~G~~~~~~~---~~~~~--------~-~~~~~~  244 (355)
                             .+....| .+|...+.+.+.+..+   .|+++..++||.++++......   .+.+.        . ....  
T Consensus       165 -------~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--  235 (281)
T 3s55_A          165 -------NFAQASYVSSKWGVIGLTKCAAHDLVGYGITVNAVAPGNIETPMTHNDFVFGTMRPDLEKPTLKDVESVFA--  235 (281)
T ss_dssp             -------CTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSTTTSSHHHHHC-------CCHHHHHHHHH--
T ss_pred             -------CCCCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccccchhhhccccccccccchhHHHHHHH--
Confidence                   2234568 7887777666655543   4899999999999998643210   00000        0 0000  


Q ss_pred             CCCCCCcceecccHHHHHHHHHHHHhCCC---CCCceEecCCCccC
Q 018503          245 PLGSGQQWFSWIHLDDIVNLIYEALSNPS---YRGVINGTAPNPVR  287 (355)
Q Consensus       245 ~~~~~~~~~~~i~v~Dva~~~~~~~~~~~---~~~~~~i~~~~~~s  287 (355)
                        ........+.+.+|+|++++.++....   .+..+++.+|...+
T Consensus       236 --~~~~~~~~~~~p~dvA~~v~~L~s~~~~~itG~~i~vdgG~~~~  279 (281)
T 3s55_A          236 --SLHLQYAPFLKPEEVTRAVLFLVDEASSHITGTVLPIDAGATAR  279 (281)
T ss_dssp             --HHCSSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGG
T ss_pred             --hhhccCcCCCCHHHHHHHHHHHcCCcccCCCCCEEEECCCcccC
Confidence              001122568999999999999998653   35589998886544

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A

Probab=99.84  E-value=1.1e-20  Score=162.37  Aligned_cols=219  Identities=14%  Similarity=0.023  Sum_probs=147.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchh--hccCCCCCCccCCCeeecCCcchhhhcC-------CCcE
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKA--ELIFPGKKTRFFPGVMIAEEPQWRDCIQ-------GSTA  119 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~--~~~~~~~~~~~~~~~d~~~~~~~~~~~~-------~~d~  119 (355)
                      .+++|+||||+|+||++++++|+++|++|++++|+.+..  ..+...........+|+.|++++.++++       ++|+
T Consensus         3 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~   82 (255)
T 2q2v_A            3 KGKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDPAPALAEIARHGVKAVHHPADLSDVAQIEALFALAEREFGGVDI   82 (255)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHHHTTSCCEEEECCCTTSHHHHHHHHHHHHHHHSSCSE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhcCCceEEEeCCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            347899999999999999999999999999999987521  1111111111134578999988887775       7999


Q ss_pred             EEECCCCCCC---CCCChhhHHHHHHHhhhhHHHHHHHH----HcCCCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCC
Q 018503          120 VVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLI----NESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGN  192 (355)
Q Consensus       120 vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~----~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~  192 (355)
                      +||+||....   .....+.+...+++|+.++..+++++    ++  .+.+++|++||...  +..         .+...
T Consensus        83 lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~--~~~g~iv~isS~~~--~~~---------~~~~~  149 (255)
T 2q2v_A           83 LVNNAGIQHVAPVEQFPLESWDKIIALNLSAVFHGTRLALPGMRA--RNWGRIINIASVHG--LVG---------STGKA  149 (255)
T ss_dssp             EEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH--TTCEEEEEECCGGG--TSC---------CTTBH
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHH--cCCcEEEEEcCchh--ccC---------CCCch
Confidence            9999997532   23456777889999999776666554    45  46789999999876  331         12234


Q ss_pred             hh-HHHHHHHHHHHHhccC---CCCeEEEEEecEEEeCCCCcccchHHHH--------HHHhCCCCCCCCcceecccHHH
Q 018503          193 DY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLF--------MMFAGGPLGSGQQWFSWIHLDD  260 (355)
Q Consensus       193 ~y-~~k~~~~~~~~~~~~~---~~~~~~i~Rp~~i~G~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~i~v~D  260 (355)
                      .| .+|...+.+.+.+..+   .|+++++++||.++++.........+..        ....    ........+++++|
T Consensus       150 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~p~~~~~~~~d  225 (255)
T 2q2v_A          150 AYVAAKHGVVGLTKVVGLETATSNVTCNAICPGWVLTPLVQKQIDDRAANGGDPLQAQHDLL----AEKQPSLAFVTPEH  225 (255)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTTSSEEEEEEEESSBCCHHHHHHHHHHHHHTCCHHHHHHHHH----TTTCTTCCCBCHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCCCcCcchhhhcccccccccchHHHHHHHH----hccCCCCCCcCHHH
Confidence            67 7777666655554433   4899999999999887421110000000        1110    11122345899999


Q ss_pred             HHHHHHHHHhCCC---CCCceEecCCC
Q 018503          261 IVNLIYEALSNPS---YRGVINGTAPN  284 (355)
Q Consensus       261 va~~~~~~~~~~~---~~~~~~i~~~~  284 (355)
                      +|++++.++..+.   .+..|++.+|.
T Consensus       226 vA~~~~~l~s~~~~~~tG~~~~vdgG~  252 (255)
T 2q2v_A          226 LGELVLFLCSEAGSQVRGAAWNVDGGW  252 (255)
T ss_dssp             HHHHHHHHTSGGGTTCCSCEEEESTTG
T ss_pred             HHHHHHHHhCCccCCCCCCEEEECCCc
Confidence            9999999987543   35588888774

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}

Probab=99.84  E-value=1.3e-20  Score=162.06  Aligned_cols=221  Identities=14%  Similarity=0.068  Sum_probs=151.8

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccC----CCCCCccCCCeeecCCcchhhhcC-------C
Q 018503           48 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIF----PGKKTRFFPGVMIAEEPQWRDCIQ-------G  116 (355)
Q Consensus        48 ~~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~~~~~~~~~~~d~~~~~~~~~~~~-------~  116 (355)
                      ++++++|||||+|+||++++++|+++|++|++++|+.+......    ..........+|+.|++++.++++       +
T Consensus         4 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   83 (257)
T 3imf_A            4 MKEKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFPGQILTVQMDVRNTDDIQKMIEQIDEKFGR   83 (257)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCSTTCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            34579999999999999999999999999999999876544321    111111134578889888877664       7


Q ss_pred             CcEEEECCCCCCC---CCCChhhHHHHHHHhhhhHHHHHHHH-----HcCCCCCCcEEEEeeeeeeeeCCCCCccccCCC
Q 018503          117 STAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLI-----NESPEGVRPSVLVSATALGYYGTSETEVFDESS  188 (355)
Q Consensus       117 ~d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~-----~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~  188 (355)
                      +|++||+||....   ...+.+.+...+++|+.++..+++++     ++  .+..++|++||...  +..         .
T Consensus        84 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~--~~~g~iv~isS~~~--~~~---------~  150 (257)
T 3imf_A           84 IDILINNAAGNFICPAEDLSVNGWNSVINIVLNGTFYCSQAIGKYWIEK--GIKGNIINMVATYA--WDA---------G  150 (257)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--TCCCEEEEECCGGG--GSC---------C
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhh--CCCcEEEEECchhh--ccC---------C
Confidence            8999999996432   23456778899999999999998887     33  34678999999866  321         1


Q ss_pred             CCCChh-HHHHHHHHHHHHhcc----CCCCeEEEEEecEEEeCCCCcccchHHHH--HHHhCCCCCCCCcceecccHHHH
Q 018503          189 PSGNDY-LAEVCREWEGTALKV----NKDVRLALIRIGIVLGKDGGALAKMIPLF--MMFAGGPLGSGQQWFSWIHLDDI  261 (355)
Q Consensus       189 ~~~~~y-~~k~~~~~~~~~~~~----~~~~~~~i~Rp~~i~G~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~i~v~Dv  261 (355)
                      +....| .+|...+.+.+.+..    ..|+++..++||.+.++.........+..  ......+      ...+...+|+
T Consensus       151 ~~~~~Y~asKaa~~~l~~~la~e~~~~~gIrvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~p------~~r~~~pedv  224 (257)
T 3imf_A          151 PGVIHSAAAKAGVLAMTKTLAVEWGRKYGIRVNAIAPGPIERTGGADKLWISEEMAKRTIQSVP------LGRLGTPEEI  224 (257)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCBSSCCCC-------CCSHHHHTTST------TCSCBCHHHH
T ss_pred             CCcHHHHHHHHHHHHHHHHHHHHhccccCeEEEEEEECCCcCCcchhhcccCHHHHHHHHhcCC------CCCCcCHHHH
Confidence            234467 777666555544432    34899999999999887532110000000  1111112      2347899999


Q ss_pred             HHHHHHHHhCCC---CCCceEecCCCccC
Q 018503          262 VNLIYEALSNPS---YRGVINGTAPNPVR  287 (355)
Q Consensus       262 a~~~~~~~~~~~---~~~~~~i~~~~~~s  287 (355)
                      |++++.++..+.   .+..+++.+|..++
T Consensus       225 A~~v~~L~s~~~~~itG~~i~vdGG~~~~  253 (257)
T 3imf_A          225 AGLAYYLCSDEAAYINGTCMTMDGGQHLH  253 (257)
T ss_dssp             HHHHHHHHSGGGTTCCSCEEEESTTTTSC
T ss_pred             HHHHHHHcCchhcCccCCEEEECCCcccC
Confidence            999999997643   45588898887554

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}

Probab=99.84  E-value=1.4e-20  Score=161.57  Aligned_cols=222  Identities=16%  Similarity=0.072  Sum_probs=154.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCC----CCCCccCCCeeecCCcchhhhcC-------CC
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP----GKKTRFFPGVMIAEEPQWRDCIQ-------GS  117 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~~d~~~~~~~~~~~~-------~~  117 (355)
                      .+++++||||+|+||++++++|+++|++|++++|+.+.......    .........+|+.|.+++.++++       ++
T Consensus        11 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i   90 (256)
T 3gaf_A           11 NDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGGKAIGLECNVTDEQHREAVIKAALDQFGKI   90 (256)
T ss_dssp             TTCEEEECSCSSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            45799999999999999999999999999999998765433211    01111134578889888777664       78


Q ss_pred             cEEEECCCCCCCC--CCChhhHHHHHHHhhhhHHHHHHHHHcC--CCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCCh
Q 018503          118 TAVVNLAGTPIGT--RWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGND  193 (355)
Q Consensus       118 d~vi~~a~~~~~~--~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~~  193 (355)
                      |++||+||.....  ....+.+...+++|+.++.++++++...  ..+..++|++||...  +..         .+....
T Consensus        91 d~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~--~~~---------~~~~~~  159 (256)
T 3gaf_A           91 TVLVNNAGGGGPKPFDMPMSDFEWAFKLNLFSLFRLSQLAAPHMQKAGGGAILNISSMAG--ENT---------NVRMAS  159 (256)
T ss_dssp             CEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGG--TCC---------CTTCHH
T ss_pred             CEEEECCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHH--cCC---------CCCchH
Confidence            9999999975332  3456778889999999999999886321  145679999999876  321         223456


Q ss_pred             h-HHHHHHHHHHHHhccC---CCCeEEEEEecEEEeCCCCcccchHHHH-HHHhCCCCCCCCcceecccHHHHHHHHHHH
Q 018503          194 Y-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLF-MMFAGGPLGSGQQWFSWIHLDDIVNLIYEA  268 (355)
Q Consensus       194 y-~~k~~~~~~~~~~~~~---~~~~~~i~Rp~~i~G~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~  268 (355)
                      | .+|...+.+.+.+..+   .|+++..++||.+.++....... .... ......+      ...+.+.+|+|++++.+
T Consensus       160 Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~-~~~~~~~~~~~p------~~r~~~~~dva~~~~~L  232 (256)
T 3gaf_A          160 YGSSKAAVNHLTRNIAFDVGPMGIRVNAIAPGAIKTDALATVLT-PEIERAMLKHTP------LGRLGEAQDIANAALFL  232 (256)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHCC-HHHHHHHHTTCT------TSSCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhCcEEEEEEEccccCchhhhccC-HHHHHHHHhcCC------CCCCCCHHHHHHHHHHH
Confidence            8 7887766666555443   48999999999998763211100 0011 1122222      23478999999999999


Q ss_pred             HhCCC---CCCceEecCCCccCH
Q 018503          269 LSNPS---YRGVINGTAPNPVRL  288 (355)
Q Consensus       269 ~~~~~---~~~~~~i~~~~~~s~  288 (355)
                      +....   .+..+++.+|...++
T Consensus       233 ~s~~~~~itG~~i~vdgG~~~~~  255 (256)
T 3gaf_A          233 CSPAAAWISGQVLTVSGGGVQEL  255 (256)
T ss_dssp             HSGGGTTCCSCEEEESTTSCCC-
T ss_pred             cCCcccCccCCEEEECCCccccC
Confidence            97543   456899999876654

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*

Probab=99.84  E-value=1.1e-20  Score=163.03  Aligned_cols=220  Identities=12%  Similarity=-0.019  Sum_probs=146.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEec-CCchhhccCC----CCCCccCCCeeecCCcchhhhcC-------C
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTR-SRSKAELIFP----GKKTRFFPGVMIAEEPQWRDCIQ-------G  116 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r-~~~~~~~~~~----~~~~~~~~~~d~~~~~~~~~~~~-------~  116 (355)
                      ..++|+||||+|+||++++++|+++|++|++++| +.+.......    .........+|+.|.+++.++++       +
T Consensus         6 ~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   85 (261)
T 1gee_A            6 EGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEFGK   85 (261)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            4579999999999999999999999999999999 5443322110    00001134468888888777664       7


Q ss_pred             CcEEEECCCCCCC---CCCChhhHHHHHHHhhhhHHHHHHHHHcC--CCC-CCcEEEEeeeeeeeeCCCCCccccCCCCC
Q 018503          117 STAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEG-VRPSVLVSATALGYYGTSETEVFDESSPS  190 (355)
Q Consensus       117 ~d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~-~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~  190 (355)
                      +|+|||+||....   .....+.+...+++|+.++.++++++...  ..+ .+++|++||...  +..         .+.
T Consensus        86 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~--~~~---------~~~  154 (261)
T 1gee_A           86 LDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHE--KIP---------WPL  154 (261)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGG--TSC---------CTT
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEeCCHHh--cCC---------CCC
Confidence            8999999997532   23355677889999999998888776441  123 579999999765  221         233


Q ss_pred             CChh-HHHHHHHHHHHHhcc---CCCCeEEEEEecEEEeCCCCcccchHHHH-HHHhCCCCCCCCcceecccHHHHHHHH
Q 018503          191 GNDY-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALAKMIPLF-MMFAGGPLGSGQQWFSWIHLDDIVNLI  265 (355)
Q Consensus       191 ~~~y-~~k~~~~~~~~~~~~---~~~~~~~i~Rp~~i~G~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~v~Dva~~~  265 (355)
                      ...| .+|...+.+.+.+..   ..+++++++||+.++++............ ......+      ...+++.+|+|+++
T Consensus       155 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~dva~~~  228 (261)
T 1gee_A          155 FVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKFADPEQRADVESMIP------MGYIGEPEEIAAVA  228 (261)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGHHHHHSHHHHHHHHTTCT------TSSCBCHHHHHHHH
T ss_pred             ccHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCcCCchhhhcccChhHHHHHHhcCC------CCCCcCHHHHHHHH
Confidence            4567 777666555544433   24899999999999987532110000111 1111112      13478999999999


Q ss_pred             HHHHhCCC---CCCceEecCCCc
Q 018503          266 YEALSNPS---YRGVINGTAPNP  285 (355)
Q Consensus       266 ~~~~~~~~---~~~~~~i~~~~~  285 (355)
                      +.++....   .+..+++.+|..
T Consensus       229 ~~l~~~~~~~~~G~~~~v~gg~~  251 (261)
T 1gee_A          229 AWLASSEASYVTGITLFADGGMT  251 (261)
T ss_dssp             HHHHSGGGTTCCSCEEEESTTGG
T ss_pred             HHHhCccccCCCCcEEEEcCCcc
Confidence            99997532   345888887753

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*

Probab=99.84  E-value=1.6e-20  Score=161.76  Aligned_cols=222  Identities=12%  Similarity=0.030  Sum_probs=151.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCC----CCCCccCCCeeecCCcchhhhc--------CC
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP----GKKTRFFPGVMIAEEPQWRDCI--------QG  116 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~~d~~~~~~~~~~~--------~~  116 (355)
                      ++++|+||||+|+||++++++|+++|++|++++|+.+.......    .........+|+.|++++.+++        .+
T Consensus         8 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~   87 (260)
T 2ae2_A            8 EGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHFHGK   87 (260)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHTTTC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            45789999999999999999999999999999998765432211    0100113457888888887766        57


Q ss_pred             CcEEEECCCCCCC---CCCChhhHHHHHHHhhhhHHHHHHHHHcC--CCCCCcEEEEeeeeeeeeCCCCCccccCCCCCC
Q 018503          117 STAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSG  191 (355)
Q Consensus       117 ~d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~  191 (355)
                      +|++||+||....   .....+.+...+++|+.++.++++++...  ..+.+++|++||...  +..         .+..
T Consensus        88 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~--~~~---------~~~~  156 (260)
T 2ae2_A           88 LNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSG--ALA---------VPYE  156 (260)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGG--TSC---------CTTC
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhh--ccC---------CCCc
Confidence            9999999997532   23456777889999999999998887321  145679999999765  321         1234


Q ss_pred             Chh-HHHHHHHHHHHHhccC---CCCeEEEEEecEEEeCCCCcc---cchHHHH-HHHhCCCCCCCCcceecccHHHHHH
Q 018503          192 NDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGAL---AKMIPLF-MMFAGGPLGSGQQWFSWIHLDDIVN  263 (355)
Q Consensus       192 ~~y-~~k~~~~~~~~~~~~~---~~~~~~i~Rp~~i~G~~~~~~---~~~~~~~-~~~~~~~~~~~~~~~~~i~v~Dva~  263 (355)
                      ..| .+|...+.+.+.+..+   .++++++++||.+.++.....   ......+ ......+      ...+.+.+|+|+
T Consensus       157 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~dvA~  230 (260)
T 2ae2_A          157 AVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRCA------LRRMGEPKELAA  230 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHHHTTSHHHHHHHHHHHHTST------TCSCBCHHHHHH
T ss_pred             chHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCCCCCcchhhhccChhhHHHHHHHHhcCC------CCCCCCHHHHHH
Confidence            567 7787777666655443   389999999999987631110   0011100 1112222      234889999999


Q ss_pred             HHHHHHhCCC---CCCceEecCCCccC
Q 018503          264 LIYEALSNPS---YRGVINGTAPNPVR  287 (355)
Q Consensus       264 ~~~~~~~~~~---~~~~~~i~~~~~~s  287 (355)
                      +++.++..+.   .+..+++.+|...+
T Consensus       231 ~v~~l~s~~~~~~tG~~~~vdgG~~~~  257 (260)
T 2ae2_A          231 MVAFLCFPAASYVTGQIIYVDGGLMAN  257 (260)
T ss_dssp             HHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred             HHHHHcCccccCCCCCEEEECCCcccc
Confidence            9999987532   35588888875443

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}

Probab=99.84  E-value=3.1e-20  Score=161.65  Aligned_cols=226  Identities=13%  Similarity=0.063  Sum_probs=148.1

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCc-hhhccC----CC-CCCccCCCeeecCCcchhhhcC------
Q 018503           48 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRS-KAELIF----PG-KKTRFFPGVMIAEEPQWRDCIQ------  115 (355)
Q Consensus        48 ~~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~-~~~~~~----~~-~~~~~~~~~d~~~~~~~~~~~~------  115 (355)
                      ++++++|||||+|+||++++++|+++|++|++++|+.. ......    .. ........+|+.|.+++.++++      
T Consensus        23 l~~k~~lVTGas~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  102 (281)
T 3v2h_A           23 MMTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADMTKPSEIADMMAMVADRF  102 (281)
T ss_dssp             CTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEECCCCHHHHHHHHHHHHTTCSSCEEEECCCTTCHHHHHHHHHHHHHHT
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHhhccCCcEEEEeCCCCCHHHHHHHHHHHHHHC
Confidence            34578999999999999999999999999999999543 222111    10 1111134578999888877664      


Q ss_pred             -CCcEEEECCCCCCC---CCCChhhHHHHHHHhhhhHHHHHHHHHcC--CCCCCcEEEEeeeeeeeeCCCCCccccCCCC
Q 018503          116 -GSTAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSP  189 (355)
Q Consensus       116 -~~d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~  189 (355)
                       ++|++||+||....   ...+.+.+...+++|+.++.++++++...  ..+..++|++||...  +..         .+
T Consensus       103 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~--~~~---------~~  171 (281)
T 3v2h_A          103 GGADILVNNAGVQFVEKIEDFPVEQWDRIIAVNLSSSFHTIRGAIPPMKKKGWGRIINIASAHG--LVA---------SP  171 (281)
T ss_dssp             SSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGG--TSC---------CT
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCccc--ccC---------CC
Confidence             78999999997533   23356777889999999999999886321  035678999999866  321         12


Q ss_pred             CCChh-HHHHHHHHHHHHhccC---CCCeEEEEEecEEEeCCCCccc-chHHHHHHHh----CCCCCCCCcceecccHHH
Q 018503          190 SGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALA-KMIPLFMMFA----GGPLGSGQQWFSWIHLDD  260 (355)
Q Consensus       190 ~~~~y-~~k~~~~~~~~~~~~~---~~~~~~i~Rp~~i~G~~~~~~~-~~~~~~~~~~----~~~~~~~~~~~~~i~v~D  260 (355)
                      ....| .+|...+.+.+.+..+   .|+++..++||.+.++...... ..........    ...+..+.....+++++|
T Consensus       172 ~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~ed  251 (281)
T 3v2h_A          172 FKSAYVAAKHGIMGLTKTVALEVAESGVTVNSICPGYVLTPLVEKQIPDQARTRGITEEQVINEVMLKGQPTKKFITVEQ  251 (281)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC----------------------------CCTTCSCBCHHH
T ss_pred             CchHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEECCCCcCcchhhhcchhhhhcCCCHHHHHHHHHHhcCCCCCccCHHH
Confidence            34568 7887766666555443   4899999999999887532110 0000000000    001122334457999999


Q ss_pred             HHHHHHHHHhCCC---CCCceEecCCC
Q 018503          261 IVNLIYEALSNPS---YRGVINGTAPN  284 (355)
Q Consensus       261 va~~~~~~~~~~~---~~~~~~i~~~~  284 (355)
                      +|++++.++..+.   .+..+++.+|.
T Consensus       252 vA~~v~~L~s~~a~~itG~~i~vdGG~  278 (281)
T 3v2h_A          252 VASLALYLAGDDAAQITGTHVSMDGGW  278 (281)
T ss_dssp             HHHHHHHHHSSGGGGCCSCEEEESTTG
T ss_pred             HHHHHHHHcCCCcCCCCCcEEEECCCc
Confidence            9999999998654   45588888774

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}

Probab=99.84  E-value=2e-20  Score=161.51  Aligned_cols=213  Identities=15%  Similarity=0.038  Sum_probs=150.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhc-------CCCcEEE
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCI-------QGSTAVV  121 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~-------~~~d~vi  121 (355)
                      .+++|+||||+|+||++++++|+++|++|++++|+........       ....|+.|.+++.+++       .++|++|
T Consensus        27 ~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~-------~~~~Dv~~~~~~~~~~~~~~~~~g~iD~lv   99 (266)
T 3uxy_A           27 EGKVALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGIAADL-------HLPGDLREAAYADGLPGAVAAGLGRLDIVV   99 (266)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEECSSCCTTSCCSE-------ECCCCTTSHHHHHHHHHHHHHHHSCCCEEE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHhhh-------ccCcCCCCHHHHHHHHHHHHHhcCCCCEEE
Confidence            4578999999999999999999999999999999876543221       2346888887776555       3799999


Q ss_pred             ECCCCCCC---CCCChhhHHHHHHHhhhhHHHHHHHH----HcCCCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCChh
Q 018503          122 NLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLI----NESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY  194 (355)
Q Consensus       122 ~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~----~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~~y  194 (355)
                      |+||....   .....+.+...+++|+.++..+++++    ++  .+.+++|++||...  +..         .+....|
T Consensus       100 nnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~--~~~g~iv~isS~~~--~~~---------~~~~~~Y  166 (266)
T 3uxy_A          100 NNAGVISRGRITETTDADWSLSLGVNVEAPFRICRAAIPLMAA--AGGGAIVNVASCWG--LRP---------GPGHALY  166 (266)
T ss_dssp             ECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH--HTCEEEEEECCSBT--TBC---------CTTBHHH
T ss_pred             ECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh--cCCcEEEEECCHHh--CCC---------CCCChHH
Confidence            99997533   23456777889999999999999887    34  45679999999765  321         1234567


Q ss_pred             -HHHHHHHHHHHHhccC---CCCeEEEEEecEEEeCCCCcc-c--c-hH-HH-HHHHhCCCCCCCCcceecccHHHHHHH
Q 018503          195 -LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGAL-A--K-MI-PL-FMMFAGGPLGSGQQWFSWIHLDDIVNL  264 (355)
Q Consensus       195 -~~k~~~~~~~~~~~~~---~~~~~~i~Rp~~i~G~~~~~~-~--~-~~-~~-~~~~~~~~~~~~~~~~~~i~v~Dva~~  264 (355)
                       .+|...+.+.+.+..+   .|+++..++||.+.++..... .  . .. .. ......      .....+.+.+|+|++
T Consensus       167 ~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~------~p~~r~~~pedvA~~  240 (266)
T 3uxy_A          167 CLTKAALASLTQCMGMDHAPQGIRINAVCPNEVNTPMLRTGFAKRGFDPDRAVAELGRT------VPLGRIAEPEDIADV  240 (266)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCHHHHHHHHHTTCCHHHHHHHHHTT------STTSSCBCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCcEEEEEeeCCCcchHhhhhhhcccccchHHHHHHHhc------CCCCCCcCHHHHHHH
Confidence             7787766666554443   489999999999987631100 0  0 00 00 011111      122357899999999


Q ss_pred             HHHHHhCCC---CCCceEecCCCccC
Q 018503          265 IYEALSNPS---YRGVINGTAPNPVR  287 (355)
Q Consensus       265 ~~~~~~~~~---~~~~~~i~~~~~~s  287 (355)
                      ++.++....   .+..+++.+|..++
T Consensus       241 v~~L~s~~~~~itG~~i~vdGG~~~s  266 (266)
T 3uxy_A          241 VLFLASDAARYLCGSLVEVNGGKAVA  266 (266)
T ss_dssp             HHHHHSGGGTTCCSCEEEESTTCCCC
T ss_pred             HHHHhCchhcCCcCCEEEECcCEeCC
Confidence            999998653   35589998886543

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}

Probab=99.84  E-value=5.4e-20  Score=157.48  Aligned_cols=218  Identities=16%  Similarity=0.032  Sum_probs=140.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcC-------CCcEEE
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ-------GSTAVV  121 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-------~~d~vi  121 (355)
                      +.|+|+||||+|+||++++++|+++|++|++++|+.+... . .    .....+|+.|++++.++++       ++|++|
T Consensus         6 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~-~-~----~~~~~~D~~d~~~~~~~~~~~~~~~g~id~lv   79 (250)
T 2fwm_X            6 SGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQEQ-Y-P----FATEVMDVADAAQVAQVCQRLLAETERLDALV   79 (250)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCCCSSC-C-S----SEEEECCTTCHHHHHHHHHHHHHHCSCCCEEE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCchhhhc-C-C----ceEEEcCCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            3578999999999999999999999999999999865311 0 0    1134578999888877764       789999


Q ss_pred             ECCCCCCC---CCCChhhHHHHHHHhhhhHHHHHHHH----HcCCCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCChh
Q 018503          122 NLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLI----NESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY  194 (355)
Q Consensus       122 ~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~----~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~~y  194 (355)
                      |+||....   ...+.+.+...+++|+.++..+++++    ++  .+.+++|++||...  +..         .+....|
T Consensus        80 ~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~--~~~g~iv~isS~~~--~~~---------~~~~~~Y  146 (250)
T 2fwm_X           80 NAAGILRMGATDQLSKEDWQQTFAVNVGGAFNLFQQTMNQFRR--QRGGAIVTVASDAA--HTP---------RIGMSAY  146 (250)
T ss_dssp             ECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHH--HTCCEEEEECCGGG--TSC---------CTTCHHH
T ss_pred             ECCCcCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHh--cCCCEEEEECchhh--CCC---------CCCCchH
Confidence            99997432   23356778899999999999998887    33  35679999999876  321         1234567


Q ss_pred             -HHHHHHHHHHHHhccC---CCCeEEEEEecEEEeCCCCcccchHHHHH-HHhC--CCCCCCCcceecccHHHHHHHHHH
Q 018503          195 -LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFM-MFAG--GPLGSGQQWFSWIHLDDIVNLIYE  267 (355)
Q Consensus       195 -~~k~~~~~~~~~~~~~---~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~i~v~Dva~~~~~  267 (355)
                       .+|...+.+.+.+..+   .|+++++++||.++++............. ....  ...........+.+.+|+|++++.
T Consensus       147 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~dvA~~v~~  226 (250)
T 2fwm_X          147 GASKAALKSLALSVGLELAGSGVRCNVVSPGSTDTDMQRTLWVSDDAEEQRIRGFGEQFKLGIPLGKIARPQEIANTILF  226 (250)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC------------------------------------CHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhCccCCEEEEEECCcccCccccccccChhHHHHHHhhhhhcccccCCCCCCcCHHHHHHHHHH
Confidence             7777666665554432   48999999999999875321100000000 0000  000001112247899999999999


Q ss_pred             HHhCCC---CCCceEecCCCc
Q 018503          268 ALSNPS---YRGVINGTAPNP  285 (355)
Q Consensus       268 ~~~~~~---~~~~~~i~~~~~  285 (355)
                      ++..+.   .+..+++.+|..
T Consensus       227 l~s~~~~~~tG~~i~vdGG~~  247 (250)
T 2fwm_X          227 LASDLASHITLQDIVVDGGST  247 (250)
T ss_dssp             HHSGGGTTCCSCEEEESTTTT
T ss_pred             HhCccccCCCCCEEEECCCcc
Confidence            997643   355788877753

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*

Probab=99.84  E-value=2e-20  Score=160.87  Aligned_cols=221  Identities=12%  Similarity=0.035  Sum_probs=152.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEE-ecCCchhhccC----CCCCCccCCCeeecCCcchhhhcC-------C
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVL-TRSRSKAELIF----PGKKTRFFPGVMIAEEPQWRDCIQ-------G  116 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~-~r~~~~~~~~~----~~~~~~~~~~~d~~~~~~~~~~~~-------~  116 (355)
                      .++++|||||+|+||++++++|+++|++|+++ .|+........    ..........+|+.|.+++.++++       +
T Consensus         3 ~~k~vlVTGas~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   82 (258)
T 3oid_A            3 QNKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGVKVLVVKANVGQPAKIKEMFQQIDETFGR   82 (258)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEecCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            45789999999999999999999999999987 77765433221    111111134578889888777664       6


Q ss_pred             CcEEEECCCCCCC---CCCChhhHHHHHHHhhhhHHHHHHHHHcC--CCCCCcEEEEeeeeeeeeCCCCCccccCCCCCC
Q 018503          117 STAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSG  191 (355)
Q Consensus       117 ~d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~  191 (355)
                      +|++||+||....   ...+.+.+...+++|+.++.++++++...  ..+..++|++||...  +..         .+..
T Consensus        83 id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~--~~~---------~~~~  151 (258)
T 3oid_A           83 LDVFVNNAASGVLRPVMELEETHWDWTMNINAKALLFCAQEAAKLMEKNGGGHIVSISSLGS--IRY---------LENY  151 (258)
T ss_dssp             CCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEEEEGGG--TSB---------CTTC
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhh--CCC---------CCCc
Confidence            7999999996432   23456777889999999999998877331  145679999999876  321         2234


Q ss_pred             Chh-HHHHHHHHHHHHhccC---CCCeEEEEEecEEEeCCCCcccchHHHH-HHHhCCCCCCCCcceecccHHHHHHHHH
Q 018503          192 NDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLF-MMFAGGPLGSGQQWFSWIHLDDIVNLIY  266 (355)
Q Consensus       192 ~~y-~~k~~~~~~~~~~~~~---~~~~~~i~Rp~~i~G~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~v~Dva~~~~  266 (355)
                      ..| .+|...+.+.+.+..+   .|+++..++||.+..+............ ......+.      ..+.+.+|+|++++
T Consensus       152 ~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~------~r~~~~~dva~~v~  225 (258)
T 3oid_A          152 TTVGVSKAALEALTRYLAVELSPKQIIVNAVSGGAIDTDALKHFPNREDLLEDARQNTPA------GRMVEIKDMVDTVE  225 (258)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECCBCSGGGGGCTTHHHHHHHHHHHCTT------SSCBCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcChhhhhcccCHHHHHHHHhcCCC------CCCcCHHHHHHHHH
Confidence            567 7887777666655543   3899999999999877432221111111 11222222      34789999999999


Q ss_pred             HHHhCCC---CCCceEecCCCcc
Q 018503          267 EALSNPS---YRGVINGTAPNPV  286 (355)
Q Consensus       267 ~~~~~~~---~~~~~~i~~~~~~  286 (355)
                      .++....   .+..+++.+|...
T Consensus       226 ~L~s~~~~~itG~~i~vdGG~~~  248 (258)
T 3oid_A          226 FLVSSKADMIRGQTIIVDGGRSL  248 (258)
T ss_dssp             HHTSSTTTTCCSCEEEESTTGGG
T ss_pred             HHhCcccCCccCCEEEECCCccC
Confidence            9998654   4558889887643

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.84  E-value=3.4e-20  Score=158.72  Aligned_cols=213  Identities=17%  Similarity=0.127  Sum_probs=141.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCC--CeEEEEecCCchhhccCCC-CCCccCCCeeecCCcchhhhcC---------C
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADN--HQVRVLTRSRSKAELIFPG-KKTRFFPGVMIAEEPQWRDCIQ---------G  116 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~---------~  116 (355)
                      ++++|+||||+|+||++++++|+++|  ++|++++|+.+....+... ........+|+.|.+++.++++         +
T Consensus         2 ~~k~vlItGasggiG~~la~~l~~~g~~~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~~   81 (250)
T 1yo6_A            2 SPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVLPLTVTCDKSLDTFVSKVGEIVGSDG   81 (250)
T ss_dssp             CCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTCCCTTEEEEECCTTCHHHHHHHHHHHHHHHGGGC
T ss_pred             CCCEEEEecCCchHHHHHHHHHHhcCCCcEEEEEecCHHHHHHHHhccCCceEEEEeecCCHHHHHHHHHHHHHhcCCCC
Confidence            34789999999999999999999999  9999999987665433221 1111134578888888877775         7


Q ss_pred             CcEEEECCCCCC-C---CCCChhhHHHHHHHhhhhHHHHHHHHHcC--CC------C-----CCcEEEEeeeeeeeeCCC
Q 018503          117 STAVVNLAGTPI-G---TRWSSEIKKEIKESRIRVTSKVVDLINES--PE------G-----VRPSVLVSATALGYYGTS  179 (355)
Q Consensus       117 ~d~vi~~a~~~~-~---~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~------~-----~~~~v~~Ss~~~~~yg~~  179 (355)
                      +|+|||+||... .   .....+.....+++|+.++.++++++...  ..      +     .+++|++||...  +...
T Consensus        82 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~--~~~~  159 (250)
T 1yo6_A           82 LSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLG--SITD  159 (250)
T ss_dssp             CCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGG--CSTT
T ss_pred             CcEEEECCcccCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcccccCCCcccCCCcEEEEeccCcc--ccCC
Confidence            999999999753 1   23356677889999999999988876541  01      3     678999999876  3321


Q ss_pred             CCccccCCCCCCChh-HHHHHHHHHHHHhccC---CCCeEEEEEecEEEeCCCCcccchHHHHHHHhCCCCCCCCcceec
Q 018503          180 ETEVFDESSPSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSW  255 (355)
Q Consensus       180 ~~~~~~e~~~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  255 (355)
                      ..  .....++...| .+|...+.+...+..+   .++++++++||.+.++....                      ..+
T Consensus       160 ~~--~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~----------------------~~~  215 (250)
T 1yo6_A          160 NT--SGSAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLGGK----------------------NAA  215 (250)
T ss_dssp             CC--STTSSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC--------------------------------
T ss_pred             cc--cccccCCccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEcCCceecCCCCC----------------------CCC
Confidence            10  00011234467 7787777666655444   38999999999987764211                      136


Q ss_pred             ccHHHHHHHHHHHHhCCC--CCCceEecCCCccC
Q 018503          256 IHLDDIVNLIYEALSNPS--YRGVINGTAPNPVR  287 (355)
Q Consensus       256 i~v~Dva~~~~~~~~~~~--~~~~~~i~~~~~~s  287 (355)
                      ++.+|+|+.++.++..+.  ..|.|...++..++
T Consensus       216 ~~~~~~a~~~~~~~~~~~~~~~G~~~~~~g~~~~  249 (250)
T 1yo6_A          216 LTVEQSTAELISSFNKLDNSHNGRFFMRNLKPYE  249 (250)
T ss_dssp             ---HHHHHHHHHHHTTCCGGGTTCEEETTEEECC
T ss_pred             CCHHHHHHHHHHHHhcccccCCCeEEEECCcCCC
Confidence            889999999999998765  35655554544343

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*

Probab=99.84  E-value=8.2e-21  Score=163.61  Aligned_cols=222  Identities=14%  Similarity=0.106  Sum_probs=151.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCC----CCCCccCCCeeecCCcchhhhcC-------CC
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP----GKKTRFFPGVMIAEEPQWRDCIQ-------GS  117 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~~d~~~~~~~~~~~~-------~~  117 (355)
                      ..++|+||||+|+||++++++|+++|++|++++|+.+.......    .........+|+.|.+++.++++       ++
T Consensus        13 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   92 (260)
T 2zat_A           13 ENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLSVTGTVCHVGKAEDRERLVAMAVNLHGGV   92 (260)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            45789999999999999999999999999999998765432210    01001133468888887776664       79


Q ss_pred             cEEEECCCCCCC----CCCChhhHHHHHHHhhhhHHHHHHHHHcC--CCCCCcEEEEeeeeeeeeCCCCCccccCCCCCC
Q 018503          118 TAVVNLAGTPIG----TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSG  191 (355)
Q Consensus       118 d~vi~~a~~~~~----~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~  191 (355)
                      |++||+||....    .....+.+...+++|+.++.++++++...  ..+.+++|++||...  |..         .+..
T Consensus        93 D~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~--~~~---------~~~~  161 (260)
T 2zat_A           93 DILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLMTKAVVPEMEKRGGGSVLIVSSVGA--YHP---------FPNL  161 (260)
T ss_dssp             CEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGG--TSC---------CTTB
T ss_pred             CEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEechhh--cCC---------CCCc
Confidence            999999996421    23456777889999999998888876421  146679999999876  432         1233


Q ss_pred             Chh-HHHHHHHHHHHHhccC---CCCeEEEEEecEEEeCCCCcc-cchHHHHHHHhCCCCCCCCcceecccHHHHHHHHH
Q 018503          192 NDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGAL-AKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIY  266 (355)
Q Consensus       192 ~~y-~~k~~~~~~~~~~~~~---~~~~~~i~Rp~~i~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~  266 (355)
                      ..| .+|...+.+...+..+   .|+++++++||.+.++..... ..-..........+      ...+.+.+|+|++++
T Consensus       162 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~dva~~v~  235 (260)
T 2zat_A          162 GPYNVSKTALLGLTKNLAVELAPRNIRVNCLAPGLIKTNFSQVLWMDKARKEYMKESLR------IRRLGNPEDCAGIVS  235 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSTTHHHHSSHHHHHHHHHHHT------CSSCBCGGGGHHHHH
T ss_pred             hhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECcccCccchhcccChHHHHHHHhcCC------CCCCCCHHHHHHHHH
Confidence            467 7777666655544332   489999999999988753210 00000000111111      234789999999999


Q ss_pred             HHHhCCC---CCCceEecCCCccC
Q 018503          267 EALSNPS---YRGVINGTAPNPVR  287 (355)
Q Consensus       267 ~~~~~~~---~~~~~~i~~~~~~s  287 (355)
                      .++..+.   .+..+++.+|..+|
T Consensus       236 ~l~s~~~~~~tG~~~~vdgG~~~s  259 (260)
T 2zat_A          236 FLCSEDASYITGETVVVGGGTASR  259 (260)
T ss_dssp             HHTSGGGTTCCSCEEEESTTCCCC
T ss_pred             HHcCcccCCccCCEEEECCCcccc
Confidence            9987643   35589999988765

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=99.84  E-value=3.3e-20  Score=158.46  Aligned_cols=218  Identities=10%  Similarity=-0.035  Sum_probs=148.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhc---CCCcEEEECCC
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCI---QGSTAVVNLAG  125 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~---~~~d~vi~~a~  125 (355)
                      ++|+|+||||+|+||++++++|+++|++|++++|+.+...... .........+|+.|++++.++.   .++|++||+||
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~id~lv~~Ag   83 (246)
T 2ag5_A            5 DGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELE-KYPGIQTRVLDVTKKKQIDQFANEVERLDVLFNVAG   83 (246)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGG-GSTTEEEEECCTTCHHHHHHHHHHCSCCSEEEECCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-hccCceEEEeeCCCHHHHHHHHHHhCCCCEEEECCc
Confidence            4578999999999999999999999999999999876654433 1101113457888888877654   57899999999


Q ss_pred             CCCC---CCCChhhHHHHHHHhhhhHHHHHHHHHcC--CCCCCcEEEEeeeeeeeeCCCCCccccCCCC-CCChh-HHHH
Q 018503          126 TPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSP-SGNDY-LAEV  198 (355)
Q Consensus       126 ~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~-~~~~y-~~k~  198 (355)
                      ....   .....+.+...+++|+.++.++++++...  ..+.+++|++||...  +..         .+ ....| .+|.
T Consensus        84 ~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~--~~~---------~~~~~~~Y~~sK~  152 (246)
T 2ag5_A           84 FVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVAS--SVK---------GVVNRCVYSTTKA  152 (246)
T ss_dssp             CCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBT--TTB---------CCTTBHHHHHHHH
T ss_pred             cCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechHh--CcC---------CCCCCccHHHHHH
Confidence            7532   23355677889999999999998876421  035679999999765  321         11 23467 7787


Q ss_pred             HHHHHHHHhccC---CCCeEEEEEecEEEeCCCCc-cc---chHHHH-HHHhCCCCCCCCcceecccHHHHHHHHHHHHh
Q 018503          199 CREWEGTALKVN---KDVRLALIRIGIVLGKDGGA-LA---KMIPLF-MMFAGGPLGSGQQWFSWIHLDDIVNLIYEALS  270 (355)
Q Consensus       199 ~~~~~~~~~~~~---~~~~~~i~Rp~~i~G~~~~~-~~---~~~~~~-~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~  270 (355)
                      ..+.+.+.+..+   .|++++++||+.++++.... ..   ...... ......+.      ..+.+.+|+|++++.++.
T Consensus       153 a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~dvA~~v~~l~s  226 (246)
T 2ag5_A          153 AVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQARGNPEEARNDFLKRQKT------GRFATAEEIAMLCVYLAS  226 (246)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEESCEECHHHHHHHHHSSSHHHHHHHHHHTCTT------SSCEEHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHHhhhcCcEEEEEeeCcCcCcchhhhhhcccCcHHHHHHHHhcCCC------CCCCCHHHHHHHHHHHhC
Confidence            666665554432   48999999999999874211 00   000111 11122222      237899999999999997


Q ss_pred             CCC---CCCceEecCCC
Q 018503          271 NPS---YRGVINGTAPN  284 (355)
Q Consensus       271 ~~~---~~~~~~i~~~~  284 (355)
                      .+.   .+..+++.+|.
T Consensus       227 ~~~~~~tG~~i~vdgG~  243 (246)
T 2ag5_A          227 DESAYVTGNPVIIDGGW  243 (246)
T ss_dssp             GGGTTCCSCEEEECTTG
T ss_pred             ccccCCCCCEEEECCCc
Confidence            543   34578787764

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=99.84  E-value=2.1e-20  Score=161.15  Aligned_cols=220  Identities=17%  Similarity=0.078  Sum_probs=153.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccC----CCC-CCccCCCeeecCCcchhhhcC-------C
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIF----PGK-KTRFFPGVMIAEEPQWRDCIQ-------G  116 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~~~-~~~~~~~~d~~~~~~~~~~~~-------~  116 (355)
                      ..++++||||+|+||++++++|+++|++|++++|+.+......    ... .......+|+.|++++.++++       +
T Consensus         9 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   88 (262)
T 3pk0_A            9 QGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSDRAQCDALAGRAVEEFGG   88 (262)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTSSSCEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence            4579999999999999999999999999999999876543321    111 111134578889888877664       7


Q ss_pred             CcEEEECCCCCCC---CCCChhhHHHHHHHhhhhHHHHHHHHHcC--CCCCCcEEEEeeeeeeeeCCCCCccccCCCCCC
Q 018503          117 STAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSG  191 (355)
Q Consensus       117 ~d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~  191 (355)
                      +|++||+||....   ...+.+.+...+++|+.++..+++++...  ..+..++|++||.....++          .+..
T Consensus        89 id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~----------~~~~  158 (262)
T 3pk0_A           89 IDVVCANAGVFPDAPLATMTPEQLNGIFAVNVNGTFYAVQACLDALIASGSGRVVLTSSITGPITG----------YPGW  158 (262)
T ss_dssp             CSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCEEEEECCSBTTTBC----------CTTC
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhccCC----------CCCC
Confidence            9999999997532   23456777889999999999988877551  1256799999997641011          2234


Q ss_pred             Chh-HHHHHHHHHHHHhccC---CCCeEEEEEecEEEeCCCCcc-cchHHHHHHHhCCCCCCCCcceecccHHHHHHHHH
Q 018503          192 NDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGAL-AKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIY  266 (355)
Q Consensus       192 ~~y-~~k~~~~~~~~~~~~~---~~~~~~i~Rp~~i~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~  266 (355)
                      ..| .+|...+.+...+..+   .|+++..++||.++++..... ..+..  ......+.      ..+...+|+|++++
T Consensus       159 ~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~--~~~~~~p~------~r~~~p~dva~~v~  230 (262)
T 3pk0_A          159 SHYGATKAAQLGFMRTAAIELAPHKITVNAIMPGNIMTEGLLENGEEYIA--SMARSIPA------GALGTPEDIGHLAA  230 (262)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHTTCHHHHH--HHHTTSTT------SSCBCHHHHHHHHH
T ss_pred             hhhHHHHHHHHHHHHHHHHHHHhhCcEEEEEEeCcCcCccccccCHHHHH--HHHhcCCC------CCCcCHHHHHHHHH
Confidence            567 7887777666655543   589999999999988642111 11111  12222222      23788999999999


Q ss_pred             HHHhCCC---CCCceEecCCCcc
Q 018503          267 EALSNPS---YRGVINGTAPNPV  286 (355)
Q Consensus       267 ~~~~~~~---~~~~~~i~~~~~~  286 (355)
                      .++..+.   .+..+++.+|..+
T Consensus       231 ~L~s~~~~~itG~~i~vdGG~~~  253 (262)
T 3pk0_A          231 FLATKEAGYITGQAIAVDGGQVL  253 (262)
T ss_dssp             HHHSGGGTTCCSCEEEESTTTTC
T ss_pred             HHhCccccCCcCCEEEECCCeec
Confidence            9997543   4558888887644

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*

Probab=99.84  E-value=5.4e-21  Score=165.20  Aligned_cols=222  Identities=14%  Similarity=0.060  Sum_probs=150.6

Q ss_pred             CCCEEEEEcCC--chHHHHHHHHHHhCCCeEEEEecCCc---hhhccCCCCCCccCCCeeecCCcchhhhcC-------C
Q 018503           49 SQMTVSVTGAT--GFIGRRLVQRLQADNHQVRVLTRSRS---KAELIFPGKKTRFFPGVMIAEEPQWRDCIQ-------G  116 (355)
Q Consensus        49 ~~~~IlVtGat--G~iG~~l~~~L~~~g~~V~~~~r~~~---~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-------~  116 (355)
                      ..++|+||||+  |+||++++++|+++|++|++++|+..   ....+...........+|+.|++++.++++       +
T Consensus         8 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   87 (265)
T 1qsg_A            8 SGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVWPK   87 (265)
T ss_dssp             TTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTCSS
T ss_pred             CCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcHHHHHHHHHHHHhcCCcEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            34789999999  99999999999999999999999872   111111000000144579999888877664       6


Q ss_pred             CcEEEECCCCCCC-------CC-CChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCCCCccccCCC
Q 018503          117 STAVVNLAGTPIG-------TR-WSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESS  188 (355)
Q Consensus       117 ~d~vi~~a~~~~~-------~~-~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~  188 (355)
                      +|++||+||....       .. ...+.+...+++|+.++.++++++...-...+++|++||...  +..         .
T Consensus        88 iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~--~~~---------~  156 (265)
T 1qsg_A           88 FDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGA--ERA---------I  156 (265)
T ss_dssp             EEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGG--TSB---------C
T ss_pred             CCEEEECCCCCCccccCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEcchhh--ccC---------C
Confidence            8999999997531       11 456677889999999999999998762112358999999765  321         1


Q ss_pred             CCCChh-HHHHHHHHHHHHhccC---CCCeEEEEEecEEEeCCCCcccchHHHHH-HHhCCCCCCCCcceecccHHHHHH
Q 018503          189 PSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFM-MFAGGPLGSGQQWFSWIHLDDIVN  263 (355)
Q Consensus       189 ~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~v~Dva~  263 (355)
                      +....| .+|...+.+...+..+   .|++++.++||.++++............. .....++      ..+.+.+|+|+
T Consensus       157 ~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~------~~~~~~~dva~  230 (265)
T 1qsg_A          157 PNYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPI------RRTVTIEDVGN  230 (265)
T ss_dssp             TTTTHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTT------SSCCCHHHHHH
T ss_pred             CCchHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCCccchhhcccccHHHHHHHHhcCCC------CCCCCHHHHHH
Confidence            234568 7787776666554433   48999999999999875332211111111 1112222      23689999999


Q ss_pred             HHHHHHhCCC---CCCceEecCCCccC
Q 018503          264 LIYEALSNPS---YRGVINGTAPNPVR  287 (355)
Q Consensus       264 ~~~~~~~~~~---~~~~~~i~~~~~~s  287 (355)
                      +++.++....   .+..|++.+|...+
T Consensus       231 ~v~~l~s~~~~~~tG~~~~vdgG~~~~  257 (265)
T 1qsg_A          231 SAAFLCSDLSAGISGEVVHVDGGFSIA  257 (265)
T ss_dssp             HHHHHTSGGGTTCCSCEEEESTTGGGB
T ss_pred             HHHHHhCchhcCccCCEEEECCCcCCC
Confidence            9999987533   34588888886443

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*

Probab=99.84  E-value=1.2e-20  Score=162.56  Aligned_cols=224  Identities=16%  Similarity=0.053  Sum_probs=151.3

Q ss_pred             CCCEEEEEcCC--chHHHHHHHHHHhCCCeEEEEecCCc---hhhccCCCCCCccCCCeeecCCcchhhhcC-------C
Q 018503           49 SQMTVSVTGAT--GFIGRRLVQRLQADNHQVRVLTRSRS---KAELIFPGKKTRFFPGVMIAEEPQWRDCIQ-------G  116 (355)
Q Consensus        49 ~~~~IlVtGat--G~iG~~l~~~L~~~g~~V~~~~r~~~---~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-------~  116 (355)
                      ++++|+||||+  |+||++++++|+++|++|++++|+.+   ....+...........+|+.|++++.++++       +
T Consensus         7 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   86 (261)
T 2wyu_A            7 SGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGALLFRADVTQDEELDALFAGVKEAFGG   86 (261)
T ss_dssp             TTCEEEEESCCSSSSHHHHHHHHHHHHTCEEEEEESCGGGHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            45789999999  99999999999999999999999874   111111100001134579999888877664       6


Q ss_pred             CcEEEECCCCCCC-------CCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCCCCccccCCCC
Q 018503          117 STAVVNLAGTPIG-------TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSP  189 (355)
Q Consensus       117 ~d~vi~~a~~~~~-------~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~  189 (355)
                      +|++||+||....       .....+.+...+++|+.++.++++++...-...+++|++||...  +..         .+
T Consensus        87 iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~--~~~---------~~  155 (261)
T 2wyu_A           87 LDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYAS--EKV---------VP  155 (261)
T ss_dssp             EEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGG--TSB---------CT
T ss_pred             CCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHhccCCEEEEEecccc--cCC---------CC
Confidence            8999999997431       13456778899999999999999998772111358999999765  321         12


Q ss_pred             CCChh-HHHHHHHHHHHHhccC---CCCeEEEEEecEEEeCCCCcccchHHHH-HHHhCCCCCCCCcceecccHHHHHHH
Q 018503          190 SGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLF-MMFAGGPLGSGQQWFSWIHLDDIVNL  264 (355)
Q Consensus       190 ~~~~y-~~k~~~~~~~~~~~~~---~~~~~~i~Rp~~i~G~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~v~Dva~~  264 (355)
                      ....| .+|...+.+...+..+   .|++++.++||.++++............ ......++      ..+.+++|+|++
T Consensus       156 ~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~p~------~~~~~~~dva~~  229 (261)
T 2wyu_A          156 KYNVMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSIPGFTKMYDRVAQTAPL------RRNITQEEVGNL  229 (261)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCTGGGGCTTHHHHHHHHHHHSTT------SSCCCHHHHHHH
T ss_pred             CchHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEeeCCCcCchhhhccccHHHHHHHHhcCCC------CCCCCHHHHHHH
Confidence            33467 7787666665554433   4899999999999987532211111111 11112222      236789999999


Q ss_pred             HHHHHhCCC---CCCceEecCCCccCHH
Q 018503          265 IYEALSNPS---YRGVINGTAPNPVRLA  289 (355)
Q Consensus       265 ~~~~~~~~~---~~~~~~i~~~~~~s~~  289 (355)
                      ++.++....   .+..|++.+|...+..
T Consensus       230 v~~l~s~~~~~~tG~~~~vdgG~~~~~~  257 (261)
T 2wyu_A          230 GLFLLSPLASGITGEVVYVDAGYHIMGM  257 (261)
T ss_dssp             HHHHHSGGGTTCCSCEEEESTTGGGBC-
T ss_pred             HHHHcChhhcCCCCCEEEECCCccccCC
Confidence            999997533   3558999888655443

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}

Probab=99.84  E-value=1.1e-20  Score=161.39  Aligned_cols=213  Identities=15%  Similarity=0.141  Sum_probs=143.2

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhCCCeEEEE-ecCCchhhccCC----CCCCccC-CCeeecCCcchhhhc-------CCC
Q 018503           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVL-TRSRSKAELIFP----GKKTRFF-PGVMIAEEPQWRDCI-------QGS  117 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~g~~V~~~-~r~~~~~~~~~~----~~~~~~~-~~~d~~~~~~~~~~~-------~~~  117 (355)
                      ++|+||||+|+||++++++|+++|++|+++ +|+.+.......    ....... ..+|+.|.+++.+++       .++
T Consensus         2 k~vlITGasggiG~~~a~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   81 (245)
T 2ph3_A            2 RKALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANLLEAEAATALVHQAAEVLGGL   81 (245)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHTTTCEEEEEESSCHHHHHHHHHHHHHTTCSCEEEEECCTTSHHHHHHHHHHHHHHHTCC
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHHHhcCCC
Confidence            589999999999999999999999999998 787654432210    0000012 456888888877665       379


Q ss_pred             cEEEECCCCCCC---CCCChhhHHHHHHHhhhhHHHHHH----HHHcCCCCCCcEEEEeeeeeeeeCCCCCccccCCCCC
Q 018503          118 TAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVD----LINESPEGVRPSVLVSATALGYYGTSETEVFDESSPS  190 (355)
Q Consensus       118 d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~----a~~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~  190 (355)
                      |+|||+||....   .....+.+...+++|+.++.++++    .+++  .+.+++|++||.... ++.          +.
T Consensus        82 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~--~~~~~iv~~sS~~~~-~~~----------~~  148 (245)
T 2ph3_A           82 DTLVNNAGITRDTLLVRMKDEDWEAVLEANLSAVFRTTREAVKLMMK--ARFGRIVNITSVVGI-LGN----------PG  148 (245)
T ss_dssp             CEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH--HTCEEEEEECCTHHH-HCC----------SS
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHh--cCCCEEEEEeChhhc-cCC----------CC
Confidence            999999997532   233566778899999999555554    4444  467899999997641 331          22


Q ss_pred             CChh-HHHHHHHHHHHHhccC---CCCeEEEEEecEEEeCCCCccc-chHHHHHHHhCCCCCCCCcceecccHHHHHHHH
Q 018503          191 GNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALA-KMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLI  265 (355)
Q Consensus       191 ~~~y-~~k~~~~~~~~~~~~~---~~~~~~i~Rp~~i~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~  265 (355)
                      ...| .+|...+...+.+..+   .+++++++||+.++++...... ....  ......+      ...+++++|+|+++
T Consensus       149 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~--~~~~~~~------~~~~~~~~dva~~~  220 (245)
T 2ph3_A          149 QANYVASKAGLIGFTRAVAKEYAQRGITVNAVAPGFIETEMTERLPQEVKE--AYLKQIP------AGRFGRPEEVAEAV  220 (245)
T ss_dssp             BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSCHHHHH--HHHHTCT------TCSCBCHHHHHHHH
T ss_pred             CcchHHHHHHHHHHHHHHHHHHHHcCeEEEEEEEEeecCcchhhcCHHHHH--HHHhcCC------CCCCcCHHHHHHHH
Confidence            3457 7776655555444332   4899999999999876422111 1111  1122222      23578999999999


Q ss_pred             HHHHhCCC---CCCceEecCCC
Q 018503          266 YEALSNPS---YRGVINGTAPN  284 (355)
Q Consensus       266 ~~~~~~~~---~~~~~~i~~~~  284 (355)
                      +.++..+.   .+..|++.+|.
T Consensus       221 ~~l~~~~~~~~~G~~~~v~gg~  242 (245)
T 2ph3_A          221 AFLVSEKAGYITGQTLCVDGGL  242 (245)
T ss_dssp             HHHTSGGGTTCCSCEEEESTTC
T ss_pred             HHHhCcccccccCCEEEECCCC
Confidence            99997642   35588888764

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}

Probab=99.84  E-value=4.2e-20  Score=160.71  Aligned_cols=230  Identities=15%  Similarity=0.126  Sum_probs=142.9

Q ss_pred             cccCCCcccCCCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCC-chhhccC----CCCCCccCCCeeecCCcchhhh
Q 018503           39 FCTSDHTQKASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSR-SKAELIF----PGKKTRFFPGVMIAEEPQWRDC  113 (355)
Q Consensus        39 ~~~~~~~~~~~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~-~~~~~~~----~~~~~~~~~~~d~~~~~~~~~~  113 (355)
                      +.+..++...++++++||||+|+||+++++.|+++|++|++++|+. +......    ..........+|+.|++++.++
T Consensus        18 ~~~~~mm~~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~   97 (280)
T 4da9_A           18 LYFQSMMTQKARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLGARVIFLRADLADLSSHQAT   97 (280)
T ss_dssp             -----CCSCCCCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHHTTCCEEEEECCTTSGGGHHHH
T ss_pred             hhhhhhhhccCCCEEEEecCCCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHH
Confidence            3333344444567899999999999999999999999999999744 3222111    1111111345799999988777


Q ss_pred             cC-------CCcEEEECCCCCC--C---CCCChhhHHHHHHHhhhhHHHHHHHHHcC--CCC---CCcEEEEeeeeeeee
Q 018503          114 IQ-------GSTAVVNLAGTPI--G---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEG---VRPSVLVSATALGYY  176 (355)
Q Consensus       114 ~~-------~~d~vi~~a~~~~--~---~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~---~~~~v~~Ss~~~~~y  176 (355)
                      ++       ++|++||+||...  .   ...+.+.+...+++|+.++..+++++...  ..+   ..++|++||...  +
T Consensus        98 ~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~g~Iv~isS~~~--~  175 (280)
T 4da9_A           98 VDAVVAEFGRIDCLVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGTVFFTQAVLKAMLASDARASRSIINITSVSA--V  175 (280)
T ss_dssp             HHHHHHHHSCCCEEEEECC------CCGGGCCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC-----
T ss_pred             HHHHHHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCCEEEEEcchhh--c
Confidence            75       7899999999731  1   23466778889999999999888876441  012   468999999876  3


Q ss_pred             CCCCCccccCCCCCCChh-HHHHHHHHHHHHhccC---CCCeEEEEEecEEEeCCCCcccchHHHHHHHhCCCCCCCCcc
Q 018503          177 GTSETEVFDESSPSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQW  252 (355)
Q Consensus       177 g~~~~~~~~e~~~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (355)
                      ..         .+....| .+|...+.+.+.+..+   .|+++..++||.+.++.........  .....    ......
T Consensus       176 ~~---------~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~--~~~~~----~~~~p~  240 (280)
T 4da9_A          176 MT---------SPERLDYCMSKAGLAAFSQGLALRLAETGIAVFEVRPGIIRSDMTAAVSGKY--DGLIE----SGLVPM  240 (280)
T ss_dssp             -------------CCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC---------------------------
T ss_pred             cC---------CCCccHHHHHHHHHHHHHHHHHHHHHHhCcEEEEEeecCCcCCchhhcchhH--HHHHh----hcCCCc
Confidence            21         1234567 7787766666554443   5899999999999877532211000  00000    001122


Q ss_pred             eecccHHHHHHHHHHHHhCCC---CCCceEecCCCc
Q 018503          253 FSWIHLDDIVNLIYEALSNPS---YRGVINGTAPNP  285 (355)
Q Consensus       253 ~~~i~v~Dva~~~~~~~~~~~---~~~~~~i~~~~~  285 (355)
                      ..+...+|+|++++.++....   .+..+++.+|..
T Consensus       241 ~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~  276 (280)
T 4da9_A          241 RRWGEPEDIGNIVAGLAGGQFGFATGSVIQADGGLS  276 (280)
T ss_dssp             -CCBCHHHHHHHHHHHHTSTTGGGTTCEEEESTTCC
T ss_pred             CCcCCHHHHHHHHHHHhCccccCCCCCEEEECCCcc
Confidence            357899999999999998764   455888888754

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}

Probab=99.84  E-value=3.5e-20  Score=161.42  Aligned_cols=224  Identities=17%  Similarity=0.067  Sum_probs=150.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccC----CCCCCccCCCeeecCCcchhhhcC-------CC
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIF----PGKKTRFFPGVMIAEEPQWRDCIQ-------GS  117 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~~~~~~~~~~~d~~~~~~~~~~~~-------~~  117 (355)
                      +++++|||||+|+||++++++|+++|++|++++|+.+......    ..........+|+.|++++.++++       ++
T Consensus        27 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i  106 (283)
T 3v8b_A           27 PSPVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGGQAIALEADVSDELQMRNAVRDLVLKFGHL  106 (283)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTTTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            3468999999999999999999999999999999876543321    111111234578889888776664       78


Q ss_pred             cEEEECCCCCCC----CCCChhhHHHHHHHhhhhHHHHHHHH----HcCCCCCCcEEEEeeeeeeeeCCCCCccccCCCC
Q 018503          118 TAVVNLAGTPIG----TRWSSEIKKEIKESRIRVTSKVVDLI----NESPEGVRPSVLVSATALGYYGTSETEVFDESSP  189 (355)
Q Consensus       118 d~vi~~a~~~~~----~~~~~~~~~~~~~~n~~~~~~l~~a~----~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~  189 (355)
                      |++||+||....    .....+.+...+++|+.++..+++++    ++  .+.+++|++||...  +..       ...+
T Consensus       107 D~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~--~~~g~Iv~isS~~~--~~~-------~~~~  175 (283)
T 3v8b_A          107 DIVVANAGINGVWAPIDDLKPFEWDETIAVNLRGTFLTLHLTVPYLKQ--RGGGAIVVVSSING--TRT-------FTTP  175 (283)
T ss_dssp             CEEEECCCCCCCBCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHH--HTCEEEEEECCSBT--TTB-------CCST
T ss_pred             CEEEECCCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHH--cCCceEEEEcChhh--ccC-------CCCC
Confidence            999999997421    24456778899999999999999887    44  45679999999765  210       0122


Q ss_pred             CCChh-HHHHHHHHHHHHhccC---CCCeEEEEEecEEEeCCCCcccchHHHHHHHh-CCCCCCCCcc--eecccHHHHH
Q 018503          190 SGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMFA-GGPLGSGQQW--FSWIHLDDIV  262 (355)
Q Consensus       190 ~~~~y-~~k~~~~~~~~~~~~~---~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~~-~~~~~~~~~~--~~~i~v~Dva  262 (355)
                      ....| .+|...+.+...+..+   .|+++..++||.+..+.......... ..... ..........  ..+...+|+|
T Consensus       176 ~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~-~~~~~~~~~~~~~~p~~~~r~~~pedvA  254 (283)
T 3v8b_A          176 GATAYTATKAAQVAIVQQLALELGKHHIRVNAVCPGAIETNISDNTKLRHE-EETAIPVEWPKGQVPITDGQPGRSEDVA  254 (283)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHTTTTTEEEEEEEECSBSSCTTCCTTBCCH-HHHSCCCBCTTCSCGGGTTCCBCHHHHH
T ss_pred             CchHHHHHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCcCCcccccccccc-hhhhhhhhhhhhcCccccCCCCCHHHHH
Confidence            34567 7887777666655443   48999999999998775432111111 00000 0001111111  3467899999


Q ss_pred             HHHHHHHhCCC---CCCceEecCCC
Q 018503          263 NLIYEALSNPS---YRGVINGTAPN  284 (355)
Q Consensus       263 ~~~~~~~~~~~---~~~~~~i~~~~  284 (355)
                      ++++.++....   .+..+++.+|.
T Consensus       255 ~~v~fL~s~~a~~itG~~i~vdGG~  279 (283)
T 3v8b_A          255 ELIRFLVSERARHVTGSPVWIDGGQ  279 (283)
T ss_dssp             HHHHHHTSGGGTTCCSCEEEESTTH
T ss_pred             HHHHHHcCccccCCcCCEEEECcCc
Confidence            99999997543   34578787763

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}

Probab=99.84  E-value=8.4e-21  Score=162.91  Aligned_cols=214  Identities=20%  Similarity=0.154  Sum_probs=127.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCC----CCCccCCCeeecCCcchhhhcC-------CC
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG----KKTRFFPGVMIAEEPQWRDCIQ-------GS  117 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~----~~~~~~~~~d~~~~~~~~~~~~-------~~  117 (355)
                      ++++||||||+|+||++++++|+++|++|++++|+.+........    ........+|+.|++++.++++       ++
T Consensus         8 ~~k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   87 (253)
T 3qiv_A            8 ENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGGTAISVAVDVSDPESAKAMADRTLAEFGGI   87 (253)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            357899999999999999999999999999999987654432111    1111134578889888877764       79


Q ss_pred             cEEEECCCCCCC------CCCChhhHHHHHHHhhhhHHHHHHHH----HcCCCCCCcEEEEeeeeeeeeCCCCCccccCC
Q 018503          118 TAVVNLAGTPIG------TRWSSEIKKEIKESRIRVTSKVVDLI----NESPEGVRPSVLVSATALGYYGTSETEVFDES  187 (355)
Q Consensus       118 d~vi~~a~~~~~------~~~~~~~~~~~~~~n~~~~~~l~~a~----~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~  187 (355)
                      |++||+||....      .....+.+...+++|+.++..+.+++    .+  .+..++|++||...  |.          
T Consensus        88 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~--~~~g~iv~isS~~~--~~----------  153 (253)
T 3qiv_A           88 DYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGALWCTRAVYKKMTK--RGGGAIVNQSSTAA--WL----------  153 (253)
T ss_dssp             CEEEECCCCCCGGGGGCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HTCEEEEEECC-----------------
T ss_pred             CEEEECCCcCCCCCCcccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHh--cCCCEEEEECCccc--cC----------
Confidence            999999997321      23456777889999999966666554    34  45678999999876  42          


Q ss_pred             CCCCChh-HHHHHHHHHHHHhccC---CCCeEEEEEecEEEeCCCCccc--chHHHHHHHhCCCCCCCCcceecccHHHH
Q 018503          188 SPSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALA--KMIPLFMMFAGGPLGSGQQWFSWIHLDDI  261 (355)
Q Consensus       188 ~~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~i~Rp~~i~G~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~i~v~Dv  261 (355)
                        ....| .+|...+.+.+.+..+   .++++..++||.++++......  .+..  ....      ......+...+|+
T Consensus       154 --~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~--~~~~------~~~~~~~~~~~dv  223 (253)
T 3qiv_A          154 --YSNYYGLAKVGINGLTQQLSRELGGRNIRINAIAPGPIDTEANRTTTPKEMVD--DIVK------GLPLSRMGTPDDL  223 (253)
T ss_dssp             --------CCHHHHHHHHHHHHHHTTTTTEEEEEEEC---------------------------------------CCHH
T ss_pred             --CCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEecCCcccchhhcCcHHHHH--HHhc------cCCCCCCCCHHHH
Confidence              23346 6676666655554443   4899999999999987532210  0000  1111      1122346678999


Q ss_pred             HHHHHHHHhCCC---CCCceEecCCCcc
Q 018503          262 VNLIYEALSNPS---YRGVINGTAPNPV  286 (355)
Q Consensus       262 a~~~~~~~~~~~---~~~~~~i~~~~~~  286 (355)
                      |++++.++....   .+..|++.+|..+
T Consensus       224 a~~~~~l~s~~~~~~tG~~~~vdgG~~~  251 (253)
T 3qiv_A          224 VGMCLFLLSDEASWITGQIFNVDGGQII  251 (253)
T ss_dssp             HHHHHHHHSGGGTTCCSCEEEC------
T ss_pred             HHHHHHHcCccccCCCCCEEEECCCeec
Confidence            999999997543   4568999888654

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}

Probab=99.83  E-value=6.2e-21  Score=165.01  Aligned_cols=222  Identities=13%  Similarity=0.056  Sum_probs=151.8

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCC----CCCccCCCeeecCCcchhhhcC-------C
Q 018503           48 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG----KKTRFFPGVMIAEEPQWRDCIQ-------G  116 (355)
Q Consensus        48 ~~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~----~~~~~~~~~d~~~~~~~~~~~~-------~  116 (355)
                      ..++++|||||+|+||++++++|+++|++|++++|+.+........    ........+|+.|.+++.++++       +
T Consensus        26 l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  105 (270)
T 3ftp_A           26 LDKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGLEGRGAVLNVNDATAVDALVESTLKEFGA  105 (270)
T ss_dssp             TTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEEeCCCHHHHHHHHHHHHHHcCC
Confidence            4457899999999999999999999999999999987654322110    0001134578889888877664       7


Q ss_pred             CcEEEECCCCCCC---CCCChhhHHHHHHHhhhhHHHHHHHHHcC--CCCCCcEEEEeeeeeeeeCCCCCccccCCCCCC
Q 018503          117 STAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSG  191 (355)
Q Consensus       117 ~d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~  191 (355)
                      +|++||+||....   .....+.+...+++|+.++.++++++...  ..+..++|++||...  +..         .+..
T Consensus       106 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~--~~~---------~~~~  174 (270)
T 3ftp_A          106 LNVLVNNAGITQDQLAMRMKDDEWDAVIDTNLKAVFRLSRAVLRPMMKARGGRIVNITSVVG--SAG---------NPGQ  174 (270)
T ss_dssp             CCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHH--HHC---------CTTB
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhh--CCC---------CCCc
Confidence            8999999997533   23456778899999999999999877421  124568999999766  321         1234


Q ss_pred             Chh-HHHHHHHHHHHHhccC---CCCeEEEEEecEEEeCCCCcccchHHHHHHHhCCCCCCCCcceecccHHHHHHHHHH
Q 018503          192 NDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYE  267 (355)
Q Consensus       192 ~~y-~~k~~~~~~~~~~~~~---~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~  267 (355)
                      ..| .+|...+.+.+.+..+   .|+++..++||.+..+........ .........+      ...+.+.+|+|++++.
T Consensus       175 ~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~-~~~~~~~~~p------~~r~~~pedvA~~v~~  247 (270)
T 3ftp_A          175 VNYAAAKAGVAGMTRALAREIGSRGITVNCVAPGFIDTDMTKGLPQE-QQTALKTQIP------LGRLGSPEDIAHAVAF  247 (270)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHHHSCHH-HHHHHHTTCT------TCSCBCHHHHHHHHHH
T ss_pred             hhHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCcchhhcCHH-HHHHHHhcCC------CCCCCCHHHHHHHHHH
Confidence            567 7787666655544433   489999999999877532111000 0011122222      2347899999999999


Q ss_pred             HHhCCC---CCCceEecCCCccC
Q 018503          268 ALSNPS---YRGVINGTAPNPVR  287 (355)
Q Consensus       268 ~~~~~~---~~~~~~i~~~~~~s  287 (355)
                      ++....   .+..+++.+|..+|
T Consensus       248 L~s~~~~~itG~~i~vdGG~~~s  270 (270)
T 3ftp_A          248 LASPQAGYITGTTLHVNGGMFMS  270 (270)
T ss_dssp             HHSGGGTTCCSCEEEESTTSSCC
T ss_pred             HhCCCcCCccCcEEEECCCcccC
Confidence            996433   45589998886543

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}

Probab=99.83  E-value=2.2e-20  Score=160.93  Aligned_cols=222  Identities=14%  Similarity=0.025  Sum_probs=145.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCC------CCCccCCCeeecCCcchhhhcC------C
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG------KKTRFFPGVMIAEEPQWRDCIQ------G  116 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~------~~~~~~~~~d~~~~~~~~~~~~------~  116 (355)
                      ++++|+||||+|+||++++++|+++|++|++++|+.+........      ........+|+.|++++.++++      +
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   85 (260)
T 2z1n_A            6 QGKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIREPGDIDRLFEKARDLGG   85 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHTTC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEEccCCCHHHHHHHHHHHHHhcC
Confidence            357899999999999999999999999999999987654322110      0001134578999988887775      5


Q ss_pred             CcEEEECCCCCCC---CCCChhhHHHHHHHhhhhHHHHHHHHHcC--CCCCCcEEEEeeeeeeeeCCCCCccccCCCCCC
Q 018503          117 STAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSG  191 (355)
Q Consensus       117 ~d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~  191 (355)
                      +|++||+||....   .....+.+...+++|+.++..+++++...  ..+.+++|++||...  +..         .+..
T Consensus        86 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~--~~~---------~~~~  154 (260)
T 2z1n_A           86 ADILVYSTGGPRPGRFMELGVEDWDESYRLLARSAVWVGRRAAEQMVEKGWGRMVYIGSVTL--LRP---------WQDL  154 (260)
T ss_dssp             CSEEEECCCCCCCBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECCGGG--TSC---------CTTB
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhh--cCC---------CCCC
Confidence            9999999996432   23456778889999999987766655321  046689999999876  431         1223


Q ss_pred             Chh-HHHHHHHHHHHHhcc---CCCCeEEEEEecEEEeCCCCccc-------chHHHHHHHhCCCCCCCCcceecccHHH
Q 018503          192 NDY-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALA-------KMIPLFMMFAGGPLGSGQQWFSWIHLDD  260 (355)
Q Consensus       192 ~~y-~~k~~~~~~~~~~~~---~~~~~~~i~Rp~~i~G~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~i~v~D  260 (355)
                      ..| .+|...+.+.+.+..   ..|+++++++||.++++......       ......   ....+........+.+.+|
T Consensus       155 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~p~~r~~~~~d  231 (260)
T 2z1n_A          155 ALSNIMRLPVIGVVRTLALELAPHGVTVNAVLPSLILTDRVRSLAEERARRSGITVEE---ALKSMASRIPMGRVGKPEE  231 (260)
T ss_dssp             HHHHHHTHHHHHHHHHHHHHHGGGTEEEEEEEECHHHHCCCC--------------------------CCTTSSCCCHHH
T ss_pred             chhHHHHHHHHHHHHHHHHHHhhhCeEEEEEEECCcccchhhhhhhhhhcccCCcHHH---HHHHHHhcCCCCCccCHHH
Confidence            457 667665555544433   24899999999999987533100       000000   0000101111234789999


Q ss_pred             HHHHHHHHHhCCC---CCCceEecCCC
Q 018503          261 IVNLIYEALSNPS---YRGVINGTAPN  284 (355)
Q Consensus       261 va~~~~~~~~~~~---~~~~~~i~~~~  284 (355)
                      +|++++.++..+.   .+..+++.+|.
T Consensus       232 va~~v~~l~s~~~~~~tG~~i~vdGG~  258 (260)
T 2z1n_A          232 LASVVAFLASEKASFITGAVIPVDGGA  258 (260)
T ss_dssp             HHHHHHHHTSGGGTTCCSCEEEESTTT
T ss_pred             HHHHHHHHhCccccCCCCCEEEeCCCc
Confidence            9999999997532   34578887763

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*

Probab=99.83  E-value=4.3e-20  Score=158.45  Aligned_cols=216  Identities=14%  Similarity=0.080  Sum_probs=145.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCC-CCccCCCeeecCCcchhhhcC-------CCcEE
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGK-KTRFFPGVMIAEEPQWRDCIQ-------GSTAV  120 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~~-------~~d~v  120 (355)
                      +.|+|+||||+|+||++++++|+++|++|++++|+.+......... .......+|+.|++++.++++       ++|++
T Consensus         4 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~l   83 (254)
T 1hdc_A            4 SGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDAARYQHLDVTIEEDWQRVVAYAREEFGSVDGL   83 (254)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            3578999999999999999999999999999999876544322110 001133478888888877765       79999


Q ss_pred             EECCCCCCC---CCCChhhHHHHHHHhhhhHHHHHH----HHHcCCCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCCh
Q 018503          121 VNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVD----LINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGND  193 (355)
Q Consensus       121 i~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~----a~~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~~  193 (355)
                      ||+||....   ...+.+.+...+++|+.++..+++    .+++  .+.+++|++||...  +..         .+....
T Consensus        84 v~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~--~~~g~iv~isS~~~--~~~---------~~~~~~  150 (254)
T 1hdc_A           84 VNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKD--AGGGSIVNISSAAG--LMG---------LALTSS  150 (254)
T ss_dssp             EECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHH--HTCEEEEEECCGGG--TSC---------CTTCHH
T ss_pred             EECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHH--cCCCEEEEECchhh--ccC---------CCCchh
Confidence            999997532   234566778899999999875544    4444  45689999999866  321         123456


Q ss_pred             h-HHHHHHHHHHHHhcc---CCCCeEEEEEecEEEeCCCCcccchHHHHHHHhCCCCCCCCcceecc-cHHHHHHHHHHH
Q 018503          194 Y-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWI-HLDDIVNLIYEA  268 (355)
Q Consensus       194 y-~~k~~~~~~~~~~~~---~~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i-~v~Dva~~~~~~  268 (355)
                      | .+|...+.+.+.+..   ..|+++++++||.++++....       ........+........+. +.+|+|++++.+
T Consensus       151 Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~-------~~~~~~~~~~~~~p~~~~~~~~~dvA~~v~~l  223 (254)
T 1hdc_A          151 YGASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTPMTAE-------TGIRQGEGNYPNTPMGRVGNEPGEIAGAVVKL  223 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHH-------HTCCCSTTSCTTSTTSSCB-CHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhhcCeEEEEEecccCcCccccc-------cchhHHHHHHhcCCCCCCCCCHHHHHHHHHHH
Confidence            7 777766655554433   248999999999998763110       0000000011111112367 999999999999


Q ss_pred             HhCCC---CCCceEecCCC
Q 018503          269 LSNPS---YRGVINGTAPN  284 (355)
Q Consensus       269 ~~~~~---~~~~~~i~~~~  284 (355)
                      +..+.   .+..+++.+|.
T Consensus       224 ~s~~~~~~tG~~~~vdgG~  242 (254)
T 1hdc_A          224 LSDTSSYVTGAELAVDGGW  242 (254)
T ss_dssp             HSGGGTTCCSCEEEESTTT
T ss_pred             hCchhcCCCCCEEEECCCc
Confidence            97642   35578887775

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*

Probab=99.83  E-value=2.5e-20  Score=161.97  Aligned_cols=219  Identities=16%  Similarity=0.135  Sum_probs=148.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCC----CCCCccCCCeeecCCcchhhhcC-------CC
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP----GKKTRFFPGVMIAEEPQWRDCIQ-------GS  117 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~~d~~~~~~~~~~~~-------~~  117 (355)
                      +.++|+||||+|+||+++++.|+++|++|++++|+.+.......    .........+|+.|++++.++++       ++
T Consensus        21 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i  100 (277)
T 2rhc_B           21 DSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYGPV  100 (277)
T ss_dssp             TSCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCSC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence            45789999999999999999999999999999998765432110    01101134578888888776664       68


Q ss_pred             cEEEECCCCCCC---CCCChhhHHHHHHHhhhhHHHHHHHHHcC----CCCCCcEEEEeeeeeeeeCCCCCccccCCCCC
Q 018503          118 TAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES----PEGVRPSVLVSATALGYYGTSETEVFDESSPS  190 (355)
Q Consensus       118 d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~~~~----~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~  190 (355)
                      |++||+||....   .....+.+...+++|+.++.++++++...    ..+.+++|++||...  +..         .+.
T Consensus       101 D~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~m~~~~~g~iv~isS~~~--~~~---------~~~  169 (277)
T 2rhc_B          101 DVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGG--KQG---------VVH  169 (277)
T ss_dssp             SEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTCHHHHTEEEEEEECCGGG--TSC---------CTT
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhChhhHhhcCCeEEEEECcccc--ccC---------CCC
Confidence            999999997532   23456677889999999999999987661    014578999999765  221         123


Q ss_pred             CChh-HHHHHHHHHHHHhcc---CCCCeEEEEEecEEEeCCCCcccc-h--------HHHH-HHHhCCCCCCCCcceecc
Q 018503          191 GNDY-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALAK-M--------IPLF-MMFAGGPLGSGQQWFSWI  256 (355)
Q Consensus       191 ~~~y-~~k~~~~~~~~~~~~---~~~~~~~i~Rp~~i~G~~~~~~~~-~--------~~~~-~~~~~~~~~~~~~~~~~i  256 (355)
                      ...| .+|...+.+.+.+..   ..|+++++++||.+.++....... +        .... ......+      ...++
T Consensus       170 ~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p------~~r~~  243 (277)
T 2rhc_B          170 AAPYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVP------IGRYV  243 (277)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEEECSBCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHST------TSSCB
T ss_pred             CccHHHHHHHHHHHHHHHHHHHHHhCcEEEEEecCcCcCchhhhhhhhcccccccchHHHHHHHHhcCC------CCCCc
Confidence            4567 777766655554433   358999999999998763211100 0        0000 1111111      23489


Q ss_pred             cHHHHHHHHHHHHhCCC---CCCceEecCCC
Q 018503          257 HLDDIVNLIYEALSNPS---YRGVINGTAPN  284 (355)
Q Consensus       257 ~v~Dva~~~~~~~~~~~---~~~~~~i~~~~  284 (355)
                      +.+|+|++++.++..+.   .+..+++.+|.
T Consensus       244 ~~~dvA~~v~~l~s~~~~~~tG~~~~vdGG~  274 (277)
T 2rhc_B          244 QPSEVAEMVAYLIGPGAAAVTAQALNVCGGL  274 (277)
T ss_dssp             CHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             CHHHHHHHHHHHhCchhcCCCCcEEEECCCc
Confidence            99999999999997643   35588888774

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*

Probab=99.83  E-value=7.4e-20  Score=158.10  Aligned_cols=220  Identities=14%  Similarity=0.108  Sum_probs=148.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCC-CCCccCCCeeecCCcchhhhcC-------CCcEE
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-KKTRFFPGVMIAEEPQWRDCIQ-------GSTAV  120 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~-------~~d~v  120 (355)
                      .+++|+||||+|+||++++++|+++|++|++++|+.+........ ........+|+.|.+++.++++       ++|+|
T Consensus        11 ~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~l   90 (265)
T 2o23_A           11 KGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVFAPADVTSEKDVQTALALAKGKFGRVDVA   90 (265)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcHhHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHCCCCCEE
Confidence            357899999999999999999999999999999987654332110 0001134578889888887775       79999


Q ss_pred             EECCCCCCCC---------CCChhhHHHHHHHhhhhHHHHHHHHHcC--CC------CCCcEEEEeeeeeeeeCCCCCcc
Q 018503          121 VNLAGTPIGT---------RWSSEIKKEIKESRIRVTSKVVDLINES--PE------GVRPSVLVSATALGYYGTSETEV  183 (355)
Q Consensus       121 i~~a~~~~~~---------~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~------~~~~~v~~Ss~~~~~yg~~~~~~  183 (355)
                      ||+||.....         ....+.+...+++|+.++.++++++...  ..      +.+++|++||...  +..     
T Consensus        91 i~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~isS~~~--~~~-----  163 (265)
T 2o23_A           91 VNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAA--FEG-----  163 (265)
T ss_dssp             EECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHH--HHC-----
T ss_pred             EECCccCCCCccccccccCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccccCCCCcEEEEeCChhh--cCC-----
Confidence            9999975321         1356677889999999999999887652  12      5678999999876  321     


Q ss_pred             ccCCCCCCChh-HHHHHHHHHHHHhcc---CCCCeEEEEEecEEEeCCCCcccc-hHHHHHHHhCCCCCCCCcceecccH
Q 018503          184 FDESSPSGNDY-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALAK-MIPLFMMFAGGPLGSGQQWFSWIHL  258 (355)
Q Consensus       184 ~~e~~~~~~~y-~~k~~~~~~~~~~~~---~~~~~~~i~Rp~~i~G~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~v  258 (355)
                          .+....| .+|...+.+.+.+..   ..++++++++||.+.++....... ...  ......+.     ...+++.
T Consensus       164 ----~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~--~~~~~~~~-----~~~~~~~  232 (265)
T 2o23_A          164 ----QVGQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTSLPEKVCN--FLASQVPF-----PSRLGDP  232 (265)
T ss_dssp             ----CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC----------C--HHHHTCSS-----SCSCBCH
T ss_pred             ----CCCCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccccCccccccCHHHHH--HHHHcCCC-----cCCCCCH
Confidence                1234567 777665555544333   248999999999998764321110 000  11111121     0247899


Q ss_pred             HHHHHHHHHHHhCCC-CCCceEecCCCcc
Q 018503          259 DDIVNLIYEALSNPS-YRGVINGTAPNPV  286 (355)
Q Consensus       259 ~Dva~~~~~~~~~~~-~~~~~~i~~~~~~  286 (355)
                      +|+|++++.++..+. .+..+++.+|..+
T Consensus       233 ~dva~~~~~l~~~~~~~G~~i~vdgG~~~  261 (265)
T 2o23_A          233 AEYAHLVQAIIENPFLNGEVIRLDGAIRM  261 (265)
T ss_dssp             HHHHHHHHHHHHCTTCCSCEEEESTTCCC
T ss_pred             HHHHHHHHHHhhcCccCceEEEECCCEec
Confidence            999999999998655 3457888877543

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}

Probab=99.83  E-value=3.2e-20  Score=159.62  Aligned_cols=218  Identities=13%  Similarity=-0.002  Sum_probs=145.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcC-------CCcEEE
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ-------GSTAVV  121 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-------~~d~vi  121 (355)
                      ++++||||||+|+||+++++.|+++|++|++++|+.+.......... .....+|+.|.+++.++++       ++|++|
T Consensus        26 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lv  104 (260)
T 3gem_A           26 SSAPILITGASQRVGLHCALRLLEHGHRVIISYRTEHASVTELRQAG-AVALYGDFSCETGIMAFIDLLKTQTSSLRAVV  104 (260)
T ss_dssp             -CCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCCHHHHHHHHHT-CEEEECCTTSHHHHHHHHHHHHHHCSCCSEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhcC-CeEEECCCCCHHHHHHHHHHHHHhcCCCCEEE
Confidence            34689999999999999999999999999999998865322111000 0144579999888776663       689999


Q ss_pred             ECCCCCCCC--CCChhhHHHHHHHhhhhHHHHHHHHHcC--CCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCChh-HH
Q 018503          122 NLAGTPIGT--RWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-LA  196 (355)
Q Consensus       122 ~~a~~~~~~--~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~~y-~~  196 (355)
                      |+||.....  ....+.+...+++|+.++..+++++...  ..+..++|++||...  +..         .+....| .+
T Consensus       105 ~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~--~~~---------~~~~~~Y~as  173 (260)
T 3gem_A          105 HNASEWLAETPGEEADNFTRMFSVHMLAPYLINLHCEPLLTASEVADIVHISDDVT--RKG---------SSKHIAYCAT  173 (260)
T ss_dssp             ECCCCCCCCCTTCHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGG--GTC---------CSSCHHHHHH
T ss_pred             ECCCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhh--cCC---------CCCcHhHHHH
Confidence            999975332  2234556789999999999998877431  145678999999876  321         2234567 77


Q ss_pred             HHHHHHHHHHhccCC--CCeEEEEEecEEEeCCCCcccchHHHHHHHhCCCCCCCCcceecccHHHHHHHHHHHHhCCC-
Q 018503          197 EVCREWEGTALKVNK--DVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPS-  273 (355)
Q Consensus       197 k~~~~~~~~~~~~~~--~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~-  273 (355)
                      |...+.+.+.+..+.  ++++..++||.+..+..... ....  ......++      ..+...+|+|++++.++.... 
T Consensus       174 Kaa~~~l~~~la~e~~~~Irvn~v~PG~v~t~~~~~~-~~~~--~~~~~~p~------~r~~~~edva~~v~~L~~~~~i  244 (260)
T 3gem_A          174 KAGLESLTLSFAARFAPLVKVNGIAPALLMFQPKDDA-AYRA--NALAKSAL------GIEPGAEVIYQSLRYLLDSTYV  244 (260)
T ss_dssp             HHHHHHHHHHHHHHHTTTCEEEEEEECTTCC------------------CCS------CCCCCTHHHHHHHHHHHHCSSC
T ss_pred             HHHHHHHHHHHHHHHCCCCEEEEEeecccccCCCCCH-HHHH--HHHhcCCC------CCCCCHHHHHHHHHHHhhCCCC
Confidence            877666655544432  59999999999876642110 0110  11111111      235678999999999996554 


Q ss_pred             CCCceEecCCCccC
Q 018503          274 YRGVINGTAPNPVR  287 (355)
Q Consensus       274 ~~~~~~i~~~~~~s  287 (355)
                      .+..+++.+|..++
T Consensus       245 tG~~i~vdGG~~~~  258 (260)
T 3gem_A          245 TGTTLTVNGGRHVK  258 (260)
T ss_dssp             CSCEEEESTTTTTC
T ss_pred             CCCEEEECCCcccC
Confidence            45589999887654

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2

Probab=99.83  E-value=1.4e-19  Score=154.84  Aligned_cols=211  Identities=15%  Similarity=0.052  Sum_probs=141.5

Q ss_pred             cCCCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhc---CCCcEEEEC
Q 018503           47 KASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCI---QGSTAVVNL  123 (355)
Q Consensus        47 ~~~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~---~~~d~vi~~  123 (355)
                      ...+++|+||||+|+||++++++|+++|++|++++|+.+....+ ..   .... +|+  .+++.+++   .++|++||+
T Consensus        16 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~-~~---~~~~-~D~--~~~~~~~~~~~~~iD~lv~~   88 (249)
T 1o5i_A           16 GIRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKRS-GH---RYVV-CDL--RKDLDLLFEKVKEVDILVLN   88 (249)
T ss_dssp             CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHT-CS---EEEE-CCT--TTCHHHHHHHSCCCSEEEEC
T ss_pred             ccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHhh-CC---eEEE-eeH--HHHHHHHHHHhcCCCEEEEC
Confidence            34567999999999999999999999999999999987443332 11   1123 566  34454444   479999999


Q ss_pred             CCCCCC---CCCChhhHHHHHHHhhhhHHHHHHH----HHcCCCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCChh-H
Q 018503          124 AGTPIG---TRWSSEIKKEIKESRIRVTSKVVDL----INESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-L  195 (355)
Q Consensus       124 a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a----~~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~~y-~  195 (355)
                      ||....   .....+.+...+++|+.++..+.++    +++  .+.+++|++||...  |..         .+....| .
T Consensus        89 Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~--~~~g~iv~isS~~~--~~~---------~~~~~~Y~~  155 (249)
T 1o5i_A           89 AGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKE--KGWGRIVAITSFSV--ISP---------IENLYTSNS  155 (249)
T ss_dssp             CCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH--HTCEEEEEECCGGG--TSC---------CTTBHHHHH
T ss_pred             CCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHH--cCCcEEEEEcchHh--cCC---------CCCCchHHH
Confidence            997532   2335667788999999997766554    444  46689999999876  432         1223457 6


Q ss_pred             HHHHHHHHHHHhcc---CCCCeEEEEEecEEEeCCCCccc-chHHHHHHHhCCCCCCCCcceecccHHHHHHHHHHHHhC
Q 018503          196 AEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALA-KMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSN  271 (355)
Q Consensus       196 ~k~~~~~~~~~~~~---~~~~~~~i~Rp~~i~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~  271 (355)
                      +|...+.+...+..   ..|+++++++||.+.++...... .... .......+      ...+.+.+|+|++++.++..
T Consensus       156 sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~-~~~~~~~p------~~~~~~~~dvA~~i~~l~s~  228 (249)
T 1o5i_A          156 ARMALTGFLKTLSFEVAPYGITVNCVAPGWTETERVKELLSEEKK-KQVESQIP------MRRMAKPEEIASVVAFLCSE  228 (249)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTHHHHSCHHHH-HHHHTTST------TSSCBCHHHHHHHHHHHHSG
T ss_pred             HHHHHHHHHHHHHHHhhhcCeEEEEEeeCCCccCcccccchhhHH-HHHHhcCC------CCCCcCHHHHHHHHHHHcCc
Confidence            67665555444333   25899999999999987532110 1110 01111112      13478999999999999875


Q ss_pred             CC---CCCceEecCCC
Q 018503          272 PS---YRGVINGTAPN  284 (355)
Q Consensus       272 ~~---~~~~~~i~~~~  284 (355)
                      +.   .+..|++.+|.
T Consensus       229 ~~~~~tG~~~~vdgG~  244 (249)
T 1o5i_A          229 KASYLTGQTIVVDGGL  244 (249)
T ss_dssp             GGTTCCSCEEEESTTC
T ss_pred             cccCCCCCEEEECCCc
Confidence            43   35588888775

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A

Probab=99.83  E-value=9.2e-20  Score=157.23  Aligned_cols=212  Identities=12%  Similarity=-0.019  Sum_probs=146.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcC-------CCcEEE
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ-------GSTAVV  121 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-------~~d~vi  121 (355)
                      ++++||||||+|+||++++++|+++|++|++++|+.+...    ..   ....+|+.|.+++.++++       ++|++|
T Consensus         7 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~----~~---~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~lv   79 (264)
T 2dtx_A            7 RDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPGEA----KY---DHIECDVTNPDQVKASIDHIFKEYGSISVLV   79 (264)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSCCCSC----SS---EEEECCTTCHHHHHHHHHHHHHHHSCCCEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEecCcccCC----ce---EEEEecCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            4578999999999999999999999999999999875411    10   134579999888877664       699999


Q ss_pred             ECCCCCCC---CCCChhhHHHHHHHhhhhHHHHHHHHHcC--CCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCChh-H
Q 018503          122 NLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-L  195 (355)
Q Consensus       122 ~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~~y-~  195 (355)
                      |+||....   .....+.+...+++|+.++..+++++...  +.+.+++|++||...  +..         .+....| .
T Consensus        80 ~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~--~~~---------~~~~~~Y~~  148 (264)
T 2dtx_A           80 NNAGIESYGKIESMSMGEWRRIIDVNLFGYYYASKFAIPYMIRSRDPSIVNISSVQA--SII---------TKNASAYVT  148 (264)
T ss_dssp             ECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEECCGGG--TSC---------CTTBHHHHH
T ss_pred             ECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCchh--ccC---------CCCchhHHH
Confidence            99997532   22356778899999999988888877541  145679999999876  331         1234567 7


Q ss_pred             HHHHHHHHHHHhccCCC--CeEEEEEecEEEeCCCCcccc-----hH----HHH-HHHhCCCCCCCCcceecccHHHHHH
Q 018503          196 AEVCREWEGTALKVNKD--VRLALIRIGIVLGKDGGALAK-----MI----PLF-MMFAGGPLGSGQQWFSWIHLDDIVN  263 (355)
Q Consensus       196 ~k~~~~~~~~~~~~~~~--~~~~i~Rp~~i~G~~~~~~~~-----~~----~~~-~~~~~~~~~~~~~~~~~i~v~Dva~  263 (355)
                      +|...+.+...+..+.+  +++++++||.+.++.......     ..    ... ......+      ...+++.+|+|+
T Consensus       149 sK~a~~~~~~~la~e~~~~i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p------~~~~~~p~dvA~  222 (264)
T 2dtx_A          149 SKHAVIGLTKSIALDYAPLLRCNAVCPATIDTPLVRKAAELEVGSDPMRIEKKISEWGHEHP------MQRIGKPQEVAS  222 (264)
T ss_dssp             HHHHHHHHHHHHHHHHTTTSEEEEEEECSBCSHHHHHHHHHHHCSCHHHHHHHHHHHHHHST------TSSCBCHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhcCCcEEEEEEeCCCcCcchhhhhhcccccCchhhHHHHHHHHhcCC------CCCCcCHHHHHH
Confidence            78766666555443322  999999999987653111100     00    111 1111111      234799999999


Q ss_pred             HHHHHHhCCC---CCCceEecCCC
Q 018503          264 LIYEALSNPS---YRGVINGTAPN  284 (355)
Q Consensus       264 ~~~~~~~~~~---~~~~~~i~~~~  284 (355)
                      +++.++..+.   .+..+++.+|.
T Consensus       223 ~v~~l~s~~~~~~tG~~i~vdGG~  246 (264)
T 2dtx_A          223 AVAFLASREASFITGTCLYVDGGL  246 (264)
T ss_dssp             HHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             HHHHHhCchhcCCCCcEEEECCCc
Confidence            9999997543   34578887764

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2

Probab=99.83  E-value=7.5e-20  Score=158.65  Aligned_cols=220  Identities=14%  Similarity=0.076  Sum_probs=146.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCC----CCCCccCCCeeecCCcchhhhc--------CC
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP----GKKTRFFPGVMIAEEPQWRDCI--------QG  116 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~~d~~~~~~~~~~~--------~~  116 (355)
                      ..++++||||+|+||++++++|+++|++|++++|+.+.......    .........+|+.|++++.+++        .+
T Consensus        20 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~   99 (273)
T 1ae1_A           20 KGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFDGK   99 (273)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTTSC
T ss_pred             CCCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            35789999999999999999999999999999998765432210    0100113457888888877666        57


Q ss_pred             CcEEEECCCCCCC---CCCChhhHHHHHHHhhhhHHHHHHHHHcC--CCCCCcEEEEeeeeeeeeCCCCCccccCCCCCC
Q 018503          117 STAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSG  191 (355)
Q Consensus       117 ~d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~  191 (355)
                      +|++||+||....   .....+.+...+++|+.++.++++++...  ..+.+++|++||...  +..         .+..
T Consensus       100 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~--~~~---------~~~~  168 (273)
T 1ae1_A          100 LNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAG--FSA---------LPSV  168 (273)
T ss_dssp             CCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGG--TSC---------CTTC
T ss_pred             CcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHhh--cCC---------CCCc
Confidence            8999999997532   23456777889999999999999877321  035679999999876  432         1234


Q ss_pred             Chh-HHHHHHHHHHHHhcc---CCCCeEEEEEecEEEeCCCCcccc----hHHHH-HHHhCCCCCCCCcceecccHHHHH
Q 018503          192 NDY-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALAK----MIPLF-MMFAGGPLGSGQQWFSWIHLDDIV  262 (355)
Q Consensus       192 ~~y-~~k~~~~~~~~~~~~---~~~~~~~i~Rp~~i~G~~~~~~~~----~~~~~-~~~~~~~~~~~~~~~~~i~v~Dva  262 (355)
                      ..| .+|...+.+...+..   ..|+++++++||.++++.......    ..... ......++      ..+.+.+|+|
T Consensus       169 ~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~p~------~r~~~p~dvA  242 (273)
T 1ae1_A          169 SLYSASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKTPM------GRAGKPQEVS  242 (273)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC-------------CHHHHHHHHHHSTT------CSCBCHHHHH
T ss_pred             chhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCchhhhhhhcccCcHHHHHHHHhcCCC------CCCcCHHHHH
Confidence            567 777766665554433   248999999999999875321100    00011 11111222      2378999999


Q ss_pred             HHHHHHHhCCC---CCCceEecCCCc
Q 018503          263 NLIYEALSNPS---YRGVINGTAPNP  285 (355)
Q Consensus       263 ~~~~~~~~~~~---~~~~~~i~~~~~  285 (355)
                      ++++.++....   .+..+++.+|..
T Consensus       243 ~~v~~l~s~~~~~~tG~~i~vdGG~~  268 (273)
T 1ae1_A          243 ALIAFLCFPAASYITGQIIWADGGFT  268 (273)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             HHHHHHhCccccCcCCCEEEECCCcc
Confidence            99999987532   355888887753

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*

Probab=99.83  E-value=5.8e-21  Score=164.37  Aligned_cols=218  Identities=12%  Similarity=0.074  Sum_probs=148.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecC-CchhhccCC----CCCCccCCCeeecCCcchhhhcC-------C
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRS-RSKAELIFP----GKKTRFFPGVMIAEEPQWRDCIQ-------G  116 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~-~~~~~~~~~----~~~~~~~~~~d~~~~~~~~~~~~-------~  116 (355)
                      .+|+|+||||+|+||++++++|+++|++|++++|+ .+.......    .........+|+.|++++.++++       +
T Consensus         6 ~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   85 (258)
T 3afn_B            6 KGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGGDAAFFAADLATSEACQQLVDEFVAKFGG   85 (258)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSS
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEECCCchhhHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            45799999999999999999999999999999998 544332110    00001134468889888887775       7


Q ss_pred             CcEEEECCCC-CCC---CCCChhhHHHHHHHhhhhHHHHHHHHHcC--CCC--C---CcEEEEeeeeeeeeCCCCCcccc
Q 018503          117 STAVVNLAGT-PIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEG--V---RPSVLVSATALGYYGTSETEVFD  185 (355)
Q Consensus       117 ~d~vi~~a~~-~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~--~---~~~v~~Ss~~~~~yg~~~~~~~~  185 (355)
                      +|+|||+||. ...   .....+.+...+++|+.++.++++++...  ..+  .   +++|++||...  +..       
T Consensus        86 id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~--~~~-------  156 (258)
T 3afn_B           86 IDVLINNAGGLVGRKPLPEIDDTFYDAVMDANIRSVVMTTKFALPHLAAAAKASGQTSAVISTGSIAG--HTG-------  156 (258)
T ss_dssp             CSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTSCEEEEEECCTHH--HHC-------
T ss_pred             CCEEEECCCCcCCcCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcccCCCCCcEEEEecchhh--ccC-------
Confidence            9999999996 321   23345667888999999999888866431  012  2   68999998765  320       


Q ss_pred             CCCCCCChh-HHHHHHHHHHHHhccC---CCCeEEEEEecEEEeCCCCcc-cchHHHHHHHhCCCCCCCCcceecccHHH
Q 018503          186 ESSPSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGAL-AKMIPLFMMFAGGPLGSGQQWFSWIHLDD  260 (355)
Q Consensus       186 e~~~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~i~Rp~~i~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~v~D  260 (355)
                       ..+....| .+|...+.+...+..+   .+++++++||+.++++..... ..+..  ....+.+      ...+++++|
T Consensus       157 -~~~~~~~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~--~~~~~~~------~~~~~~~~d  227 (258)
T 3afn_B          157 -GGPGAGLYGAAKAFLHNVHKNWVDFHTKDGVRFNIVSPGTVDTAFHADKTQDVRD--RISNGIP------MGRFGTAEE  227 (258)
T ss_dssp             -CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSGGGTTCCHHHHH--HHHTTCT------TCSCBCGGG
T ss_pred             -CCCCchHHHHHHHHHHHHHHHHHHhhcccCeEEEEEeCCCcccccccccCHHHHH--HHhccCC------CCcCCCHHH
Confidence             12334567 7787766665554432   489999999999998753322 11111  1222222      235899999


Q ss_pred             HHHHHHHHHhCCC----CCCceEecCCC
Q 018503          261 IVNLIYEALSNPS----YRGVINGTAPN  284 (355)
Q Consensus       261 va~~~~~~~~~~~----~~~~~~i~~~~  284 (355)
                      +|++++.++..+.    .+..|++.+|.
T Consensus       228 va~~~~~l~~~~~~~~~~G~~~~v~gg~  255 (258)
T 3afn_B          228 MAPAFLFFASHLASGYITGQVLDINGGQ  255 (258)
T ss_dssp             THHHHHHHHCHHHHTTCCSEEEEESTTS
T ss_pred             HHHHHHHHhCcchhccccCCEEeECCCc
Confidence            9999999987532    34588988875

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2

Probab=99.83  E-value=4.2e-20  Score=162.82  Aligned_cols=222  Identities=14%  Similarity=0.061  Sum_probs=148.6

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCC---------CCCCccCCCeeecCCcchhhhcC---
Q 018503           48 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP---------GKKTRFFPGVMIAEEPQWRDCIQ---  115 (355)
Q Consensus        48 ~~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~---------~~~~~~~~~~d~~~~~~~~~~~~---  115 (355)
                      ..+++|+||||+|+||++++++|+++|++|++++|+.+.......         .........+|+.|.+++.++++   
T Consensus        16 l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~   95 (303)
T 1yxm_A           16 LQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKSTL   95 (303)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCHHHHHHHHHHHH
Confidence            345799999999999999999999999999999998765432110         00011133478888888877764   


Q ss_pred             ----CCcEEEECCCCCCC---CCCChhhHHHHHHHhhhhHHHHHHHHHc-C-CCCCCcEEEEeeeeeeeeCCCCCccccC
Q 018503          116 ----GSTAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINE-S-PEGVRPSVLVSATALGYYGTSETEVFDE  186 (355)
Q Consensus       116 ----~~d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~~~-~-~~~~~~~v~~Ss~~~~~yg~~~~~~~~e  186 (355)
                          ++|+|||+||....   .....+.+...+++|+.++.++++++.. . ..+.+++|++||...  ++         
T Consensus        96 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~--~~---------  164 (303)
T 1yxm_A           96 DTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPTK--AG---------  164 (303)
T ss_dssp             HHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCCCT--TC---------
T ss_pred             HHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCeEEEEEeecc--cC---------
Confidence                58999999996422   2345566788899999999999998754 1 123568999998762  32         


Q ss_pred             CCCCCChh-HHHHHHHHHHHHhccC---CCCeEEEEEecEEEeCCC-CcccchHHH-H-HHHhCCCCCCCCcceecccHH
Q 018503          187 SSPSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDG-GALAKMIPL-F-MMFAGGPLGSGQQWFSWIHLD  259 (355)
Q Consensus       187 ~~~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~i~Rp~~i~G~~~-~~~~~~~~~-~-~~~~~~~~~~~~~~~~~i~v~  259 (355)
                       .+....| .+|...+...+.+..+   .|++++++|||.++++.. .......+. . ......      ....+.+.+
T Consensus       165 -~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~------p~~~~~~~~  237 (303)
T 1yxm_A          165 -FPLAVHSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQKI------PAKRIGVPE  237 (303)
T ss_dssp             -CTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGGTTSGGGGGGGGTTGGGGS------TTSSCBCTH
T ss_pred             -CCcchhhHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCcccchhhhhccccchHHHHHHHhcC------cccCCCCHH
Confidence             1223457 6676555555444333   489999999999999831 111110000 0 001111      112478999


Q ss_pred             HHHHHHHHHHhCCC---CCCceEecCCCccC
Q 018503          260 DIVNLIYEALSNPS---YRGVINGTAPNPVR  287 (355)
Q Consensus       260 Dva~~~~~~~~~~~---~~~~~~i~~~~~~s  287 (355)
                      |+|++++.++....   .+..+++.+|..++
T Consensus       238 dvA~~i~~l~~~~~~~~~G~~~~v~gG~~~~  268 (303)
T 1yxm_A          238 EVSSVVCFLLSPAASFITGQSVDVDGGRSLY  268 (303)
T ss_dssp             HHHHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred             HHHHHHHHHhCcccccCCCcEEEECCCeecc
Confidence            99999999997533   34588888886554

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}

Probab=99.83  E-value=9e-20  Score=157.35  Aligned_cols=205  Identities=15%  Similarity=0.138  Sum_probs=144.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcC-------CCcEEE
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ-------GSTAVV  121 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-------~~d~vi  121 (355)
                      ++++||||||+|+||+++++.|+++|++|++++|+.+.........  .....+|+.|.+++.++++       ++|++|
T Consensus        15 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~--~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv   92 (266)
T 3p19_A           15 MKKLVVITGASSGIGEAIARRFSEEGHPLLLLARRVERLKALNLPN--TLCAQVDVTDKYTFDTAITRAEKIYGPADAIV   92 (266)
T ss_dssp             CCCEEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHTTCCTT--EEEEECCTTCHHHHHHHHHHHHHHHCSEEEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHhhcCC--ceEEEecCCCHHHHHHHHHHHHHHCCCCCEEE
Confidence            4578999999999999999999999999999999877655443221  1134578999888877664       789999


Q ss_pred             ECCCCCCC---CCCChhhHHHHHHHhhhhHHHHHHHHHcC--CCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCChh-H
Q 018503          122 NLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-L  195 (355)
Q Consensus       122 ~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~~y-~  195 (355)
                      |+||....   .....+.+...+++|+.++.++++++...  ..+.+++|++||...  +..         .+....| .
T Consensus        93 nnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~IV~isS~~~--~~~---------~~~~~~Y~a  161 (266)
T 3p19_A           93 NNAGMMLLGQIDTQEANEWQRMFDVNVLGLLNGMQAVLAPMKARNCGTIINISSIAG--KKT---------FPDHAAYCG  161 (266)
T ss_dssp             ECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGG--TSC---------CTTCHHHHH
T ss_pred             ECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcChhh--CCC---------CCCCchHHH
Confidence            99997533   23456777889999999999977765321  046679999999876  321         2234567 7


Q ss_pred             HHHHHHHHHHHhccC---CCCeEEEEEecEEEeCCCCcccc--hHHHHHHHhCCCCCCCCcceecccHHHHHHHHHHHHh
Q 018503          196 AEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAK--MIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALS  270 (355)
Q Consensus       196 ~k~~~~~~~~~~~~~---~~~~~~i~Rp~~i~G~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~  270 (355)
                      +|...+.+.+.+..+   .|+++..++||.+.++.......  ........ ..+      ...+++.+|+|++++.++.
T Consensus       162 sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~-~~~------~~r~~~pedvA~av~~l~~  234 (266)
T 3p19_A          162 TKFAVHAISENVREEVAASNVRVMTIAPSAVKTELLSHTTSQQIKDGYDAW-RVD------MGGVLAADDVARAVLFAYQ  234 (266)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTCEEEEEEECSBSSSGGGGCSCHHHHHHHHHH-HHH------TTCCBCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhcccCcEEEEEeeCccccchhhcccchhhhHHHHhh-ccc------ccCCCCHHHHHHHHHHHHc
Confidence            787666655544433   58999999999998875322111  11111100 001      1237899999999999999


Q ss_pred             CCC
Q 018503          271 NPS  273 (355)
Q Consensus       271 ~~~  273 (355)
                      .+.
T Consensus       235 ~~~  237 (266)
T 3p19_A          235 QPQ  237 (266)
T ss_dssp             SCT
T ss_pred             CCC
Confidence            876

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G

Probab=99.83  E-value=2.4e-20  Score=159.15  Aligned_cols=215  Identities=14%  Similarity=0.084  Sum_probs=145.3

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhCCCeEEEE-ecCCchhhccCCC----CCCccCCCeeecCCcchhhhcC-------CCc
Q 018503           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVL-TRSRSKAELIFPG----KKTRFFPGVMIAEEPQWRDCIQ-------GST  118 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~g~~V~~~-~r~~~~~~~~~~~----~~~~~~~~~d~~~~~~~~~~~~-------~~d  118 (355)
                      ++|+||||+|+||++++++|+++|++|+++ .|+.+........    ........+|+.|.+++.++++       ++|
T Consensus         2 k~vlVTGasggiG~~la~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   81 (244)
T 1edo_A            2 PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTID   81 (244)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSCCS
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCCCC
Confidence            689999999999999999999999999995 7776543321100    0001133478888888877764       689


Q ss_pred             EEEECCCCCCC---CCCChhhHHHHHHHhhhhHHHHHHHHHcC--CCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCCh
Q 018503          119 AVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGND  193 (355)
Q Consensus       119 ~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~~  193 (355)
                      +|||+||....   .....+.+...+++|+.++.++++++...  ..+.+++|++||.... ++.          +....
T Consensus        82 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~-~~~----------~~~~~  150 (244)
T 1edo_A           82 VVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGL-IGN----------IGQAN  150 (244)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHH-HCC----------TTCHH
T ss_pred             EEEECCCCCCCcCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCEEEEECChhhc-CCC----------CCCcc
Confidence            99999997533   22355677889999999999998877541  1256799999997651 321          23446


Q ss_pred             h-HHHHHHHHHHHHhcc---CCCCeEEEEEecEEEeCCCCcccchHHHH-HHHhCCCCCCCCcceecccHHHHHHHHHHH
Q 018503          194 Y-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALAKMIPLF-MMFAGGPLGSGQQWFSWIHLDDIVNLIYEA  268 (355)
Q Consensus       194 y-~~k~~~~~~~~~~~~---~~~~~~~i~Rp~~i~G~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~  268 (355)
                      | .+|...+...+.+..   ..+++++++||+.++++.......  ... ......+      ...+++.+|+|++++.+
T Consensus       151 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~--~~~~~~~~~~~------~~~~~~~~dva~~~~~l  222 (244)
T 1edo_A          151 YAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMTAKLGE--DMEKKILGTIP------LGRTGQPENVAGLVEFL  222 (244)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCH--HHHHHHHTSCT------TCSCBCHHHHHHHHHHH
T ss_pred             chhhHHHHHHHHHHHHHHhhhcCCEEEEEeeCccccchhhhcCh--HHHHHHhhcCC------CCCCCCHHHHHHHHHHH
Confidence            7 777765555544433   258999999999998764211110  111 1112222      13478999999999999


Q ss_pred             HhCCC----CCCceEecCCC
Q 018503          269 LSNPS----YRGVINGTAPN  284 (355)
Q Consensus       269 ~~~~~----~~~~~~i~~~~  284 (355)
                      +..+.    .+..|++.+|.
T Consensus       223 ~~~~~~~~~~G~~~~v~gG~  242 (244)
T 1edo_A          223 ALSPAASYITGQAFTIDGGI  242 (244)
T ss_dssp             HHCSGGGGCCSCEEEESTTT
T ss_pred             hCCCccCCcCCCEEEeCCCc
Confidence            85432    35588888774

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*

Probab=99.83  E-value=1.2e-19  Score=157.71  Aligned_cols=217  Identities=17%  Similarity=0.076  Sum_probs=145.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEec-CCchhhccCCC-----CCCccCCCeeecCC----cchhhhcC---
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTR-SRSKAELIFPG-----KKTRFFPGVMIAEE----PQWRDCIQ---  115 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r-~~~~~~~~~~~-----~~~~~~~~~d~~~~----~~~~~~~~---  115 (355)
                      +.++++||||+|+||++++++|+++|++|++++| +.+........     ........+|+.|.    +++.++++   
T Consensus        10 ~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   89 (276)
T 1mxh_A           10 ECPAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCSF   89 (276)
T ss_dssp             -CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHhcCCceEEEeccCCCccccHHHHHHHHHHHH
Confidence            4578999999999999999999999999999999 65543322100     00011345789998    77776664   


Q ss_pred             ----CCcEEEECCCCCCCC---CCCh-----------hhHHHHHHHhhhhHHHHHHHHHcC-CCCC------CcEEEEee
Q 018503          116 ----GSTAVVNLAGTPIGT---RWSS-----------EIKKEIKESRIRVTSKVVDLINES-PEGV------RPSVLVSA  170 (355)
Q Consensus       116 ----~~d~vi~~a~~~~~~---~~~~-----------~~~~~~~~~n~~~~~~l~~a~~~~-~~~~------~~~v~~Ss  170 (355)
                          ++|++||+||.....   ....           +.+...+++|+.++.++++++... ..+.      +++|++||
T Consensus        90 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~g~iv~isS  169 (276)
T 1mxh_A           90 RAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCD  169 (276)
T ss_dssp             HHHSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEEEEECC
T ss_pred             HhcCCCCEEEECCCCCCCCCccccCcccccccccchHHHHHHHHHhccHHHHHHHHHHHHHHhcCCCCCCCCcEEEEECc
Confidence                789999999974321   2233           667789999999999999988763 1123      68999999


Q ss_pred             eeeeeeCCCCCccccCCCCCCChh-HHHHHHHHHHHHhccC---CCCeEEEEEecEEEeCCCCcccchHHHHHHHhCCCC
Q 018503          171 TALGYYGTSETEVFDESSPSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPL  246 (355)
Q Consensus       171 ~~~~~yg~~~~~~~~e~~~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~~~~~~  246 (355)
                      ...  +..         .+....| .+|...+.+...+..+   .|++++.++||.++++ .........  ......+.
T Consensus       170 ~~~--~~~---------~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~PG~v~t~-~~~~~~~~~--~~~~~~p~  235 (276)
T 1mxh_A          170 AMT--DLP---------LPGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLP-PAMPQETQE--EYRRKVPL  235 (276)
T ss_dssp             GGG--GSC---------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCC-SSSCHHHHH--HHHTTCTT
T ss_pred             hhh--cCC---------CCCCeehHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCC-ccCCHHHHH--HHHhcCCC
Confidence            876  421         1234567 7787666665544432   4899999999999998 221111111  11222222


Q ss_pred             CCCCcceecccHHHHHHHHHHHHhCCC---CCCceEecCCC
Q 018503          247 GSGQQWFSWIHLDDIVNLIYEALSNPS---YRGVINGTAPN  284 (355)
Q Consensus       247 ~~~~~~~~~i~v~Dva~~~~~~~~~~~---~~~~~~i~~~~  284 (355)
                      +     +++.+.+|+|++++.++..+.   .+..+++.+|.
T Consensus       236 ~-----r~~~~~~dva~~v~~l~s~~~~~~tG~~~~vdgG~  271 (276)
T 1mxh_A          236 G-----QSEASAAQIADAIAFLVSKDAGYITGTTLKVDGGL  271 (276)
T ss_dssp             T-----SCCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             C-----CCCCCHHHHHHHHHHHhCccccCccCcEEEECCch
Confidence            1     237899999999999997543   34578888774

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*

Probab=99.83  E-value=7.9e-20  Score=156.35  Aligned_cols=217  Identities=12%  Similarity=0.048  Sum_probs=142.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCC-chhhc-cCCCCCCccCCCeeecCCcchhhhc-------CCCcE
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSR-SKAEL-IFPGKKTRFFPGVMIAEEPQWRDCI-------QGSTA  119 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~-~~~~~-~~~~~~~~~~~~~d~~~~~~~~~~~-------~~~d~  119 (355)
                      ++++|+||||+|+||++++++|+++|++|++++|+. +.... +...........+|+.|++++.+++       .++|+
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~   85 (249)
T 2ew8_A            6 KDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTFGRCDI   85 (249)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHcCCCCE
Confidence            457899999999999999999999999999999987 44322 1100110113457888888887665       47999


Q ss_pred             EEECCCCCCC---CCCChhhHHHHHHHhhhhHHHHHHHH----HcCCCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCC
Q 018503          120 VVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLI----NESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGN  192 (355)
Q Consensus       120 vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~----~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~  192 (355)
                      +||+||....   ...+.+.+...+++|+.++.++++++    ++  .+.+++|++||...  +..         .+...
T Consensus        86 lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~--~~~g~iv~isS~~~--~~~---------~~~~~  152 (249)
T 2ew8_A           86 LVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKR--NGWGRIINLTSTTY--WLK---------IEAYT  152 (249)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH--HTCEEEEEECCGGG--GSC---------CSSCH
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHH--cCCeEEEEEcchhh--ccC---------CCCch
Confidence            9999997532   23456777889999999988877774    44  45679999999876  432         12345


Q ss_pred             hh-HHHHHHHHHHHHhccC---CCCeEEEEEecEEEeCCCC-cccchHHHHHHHhCCCCCCCCcceecccHHHHHHHHHH
Q 018503          193 DY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGG-ALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYE  267 (355)
Q Consensus       193 ~y-~~k~~~~~~~~~~~~~---~~~~~~i~Rp~~i~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~  267 (355)
                      .| .+|...+.+...+..+   .|++++.++||.+.++... ....  ........  +.  .....+.+.+|+|++++.
T Consensus       153 ~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~--~~~~~~~~--~~--~~~~~~~~p~dva~~~~~  226 (249)
T 2ew8_A          153 HYISTKAANIGFTRALASDLGKDGITVNAIAPSLVRTATTEASALS--AMFDVLPN--ML--QAIPRLQVPLDLTGAAAF  226 (249)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCC--------------------C--TT--SSSCSCCCTHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcCcCccchhcccc--chhhHHHH--hh--CccCCCCCHHHHHHHHHH
Confidence            67 7777666655554432   4899999999999887532 1100  00000000  00  112347899999999999


Q ss_pred             HHhCCC---CCCceEecCCC
Q 018503          268 ALSNPS---YRGVINGTAPN  284 (355)
Q Consensus       268 ~~~~~~---~~~~~~i~~~~  284 (355)
                      ++..+.   .+..+++.+|.
T Consensus       227 l~s~~~~~~tG~~~~vdGG~  246 (249)
T 2ew8_A          227 LASDDASFITGQTLAVDGGM  246 (249)
T ss_dssp             HTSGGGTTCCSCEEEESSSC
T ss_pred             HcCcccCCCCCcEEEECCCc
Confidence            997532   34578887764

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}

Probab=99.83  E-value=1.6e-19  Score=157.55  Aligned_cols=219  Identities=12%  Similarity=0.018  Sum_probs=148.9

Q ss_pred             CCCEEEEEcCC--chHHHHHHHHHHhCCCeEEEEecCCc---hhhccCCCCCCccCCCeeecCCcchhhhcC-------C
Q 018503           49 SQMTVSVTGAT--GFIGRRLVQRLQADNHQVRVLTRSRS---KAELIFPGKKTRFFPGVMIAEEPQWRDCIQ-------G  116 (355)
Q Consensus        49 ~~~~IlVtGat--G~iG~~l~~~L~~~g~~V~~~~r~~~---~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-------~  116 (355)
                      .+++|+||||+  |+||+++++.|+++|++|++++|+.+   ....+...........+|+.|.+++.++++       +
T Consensus        20 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~   99 (285)
T 2p91_A           20 EGKRALITGVANERSIAYGIAKSFHREGAQLAFTYATPKLEKRVREIAKGFGSDLVVKCDVSLDEDIKNLKKFLEENWGS   99 (285)
T ss_dssp             TTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTSC
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            45789999999  99999999999999999999999874   111111000001144579999888877664       6


Q ss_pred             CcEEEECCCCCCC-------CCCChhhHHHHHHHhhhhHHHHHHHHHcC-CCCCCcEEEEeeeeeeeeCCCCCccccCCC
Q 018503          117 STAVVNLAGTPIG-------TRWSSEIKKEIKESRIRVTSKVVDLINES-PEGVRPSVLVSATALGYYGTSETEVFDESS  188 (355)
Q Consensus       117 ~d~vi~~a~~~~~-------~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~  188 (355)
                      +|++||+||....       .....+.+...+++|+.++.++++++... ....+++|++||...  +..         .
T Consensus       100 iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~--~~~---------~  168 (285)
T 2p91_A          100 LDIIVHSIAYAPKEEFKGGVIDTSREGFKIAMDISVYSLIALTRELLPLMEGRNGAIVTLSYYGA--EKV---------V  168 (285)
T ss_dssp             CCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGGTTSCCEEEEEECGGG--TSB---------C
T ss_pred             CCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCEEEEEccchh--ccC---------C
Confidence            8999999997531       13456777889999999999999998763 113478999999765  321         1


Q ss_pred             CCCChh-HHHHHHHHHHHHhcc---CCCCeEEEEEecEEEeCCCCcccchHHHH-HHHhCCCCCCCCcceecccHHHHHH
Q 018503          189 PSGNDY-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALAKMIPLF-MMFAGGPLGSGQQWFSWIHLDDIVN  263 (355)
Q Consensus       189 ~~~~~y-~~k~~~~~~~~~~~~---~~~~~~~i~Rp~~i~G~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~v~Dva~  263 (355)
                      +....| .+|...+.+...+..   ..|+++++++||.+.++............ ......++      ..+.+.+|+|+
T Consensus       169 ~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~------~~~~~~~dva~  242 (285)
T 2p91_A          169 PHYNVMGIAKAALESTVRYLAYDIAKHGHRINAISAGPVKTLAAYSITGFHLLMEHTTKVNPF------GKPITIEDVGD  242 (285)
T ss_dssp             TTTTHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCSCC--CTTHHHHHHHHHHHSTT------SSCCCHHHHHH
T ss_pred             CCccHHHHHHHHHHHHHHHHHHHhcccCcEEEEEEeCcccCchhhcccchHHHHHHHHhcCCC------CCCcCHHHHHH
Confidence            234568 778776666555443   35899999999999988643221111111 11111222      23678999999


Q ss_pred             HHHHHHhCCC---CCCceEecCCC
Q 018503          264 LIYEALSNPS---YRGVINGTAPN  284 (355)
Q Consensus       264 ~~~~~~~~~~---~~~~~~i~~~~  284 (355)
                      +++.++....   .+..|++.+|.
T Consensus       243 ~~~~l~s~~~~~~tG~~~~vdgg~  266 (285)
T 2p91_A          243 TAVFLCSDWARAITGEVVHVDNGY  266 (285)
T ss_dssp             HHHHHTSGGGTTCCSCEEEESTTG
T ss_pred             HHHHHcCCcccCCCCCEEEECCCc
Confidence            9999997533   34578888774

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0

Probab=99.83  E-value=6.9e-20  Score=156.81  Aligned_cols=218  Identities=11%  Similarity=0.061  Sum_probs=142.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCC-CCccCCCeeecCCcchhhhcC---CCcEEEECC
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGK-KTRFFPGVMIAEEPQWRDCIQ---GSTAVVNLA  124 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~~---~~d~vi~~a  124 (355)
                      ..++||||||+|+||+++++.|+++|++|++++|+.+......... .......+|+.+.+++.++++   ++|++||+|
T Consensus        13 ~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~li~~A   92 (249)
T 3f9i_A           13 TGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALKDNYTIEVCNLANKEECSNLISKTSNLDILVCNA   92 (249)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHTCSCCSEEEECC
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhccCccEEEcCCCCHHHHHHHHHhcCCCCEEEECC
Confidence            4579999999999999999999999999999999876644332110 000133468888888877775   689999999


Q ss_pred             CCCCC---CCCChhhHHHHHHHhhhhHHHHHHHHHcC--CCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCChh-HHHH
Q 018503          125 GTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-LAEV  198 (355)
Q Consensus       125 ~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~~y-~~k~  198 (355)
                      |....   .....+.+...+++|+.++.++++++...  ..+.+++|++||...  +..         .+....| .+|.
T Consensus        93 g~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~--~~~---------~~~~~~Y~~sK~  161 (249)
T 3f9i_A           93 GITSDTLAIRMKDQDFDKVIDINLKANFILNREAIKKMIQKRYGRIINISSIVG--IAG---------NPGQANYCASKA  161 (249)
T ss_dssp             C-------------CHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCC----C---------CSCSHHHHHHHH
T ss_pred             CCCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEEccHHh--ccC---------CCCCchhHHHHH
Confidence            97532   22345667889999999999988876321  035578999999876  321         1234567 7787


Q ss_pred             HHHHHHHHhccC---CCCeEEEEEecEEEeCCCCcccchHHHHHHHhCCCCCCCCcceecccHHHHHHHHHHHHhCCC--
Q 018503          199 CREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPS--  273 (355)
Q Consensus       199 ~~~~~~~~~~~~---~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~--  273 (355)
                      ..+.+.+.+..+   .|+++..++||.+.++......... ........+      ...+.+.+|+|++++.++..+.  
T Consensus       162 a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~-~~~~~~~~~------~~~~~~~~dva~~~~~l~s~~~~~  234 (249)
T 3f9i_A          162 GLIGMTKSLSYEVATRGITVNAVAPGFIKSDMTDKLNEKQ-REAIVQKIP------LGTYGIPEDVAYAVAFLASNNASY  234 (249)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECCBC------CCHHH-HHHHHHHCT------TCSCBCHHHHHHHHHHHHSGGGTT
T ss_pred             HHHHHHHHHHHHHHHcCcEEEEEecCccccCcccccCHHH-HHHHHhcCC------CCCCcCHHHHHHHHHHHcCCccCC
Confidence            666655544432   4899999999999887543221111 011112222      2357899999999999998643  


Q ss_pred             -CCCceEecCCC
Q 018503          274 -YRGVINGTAPN  284 (355)
Q Consensus       274 -~~~~~~i~~~~  284 (355)
                       .+..+++.+|.
T Consensus       235 ~tG~~~~vdgG~  246 (249)
T 3f9i_A          235 ITGQTLHVNGGM  246 (249)
T ss_dssp             CCSCEEEESTTS
T ss_pred             ccCcEEEECCCE
Confidence             35688888875

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A

Probab=99.83  E-value=1.4e-19  Score=153.93  Aligned_cols=215  Identities=15%  Similarity=0.123  Sum_probs=145.6

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhc-------CCCcEEEE
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCI-------QGSTAVVN  122 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~-------~~~d~vi~  122 (355)
                      +++++||||+|+||++++++|+++|++|++++|+.+....... .   ....+|+.| +++.+++       .++|++||
T Consensus         2 ~k~vlVTGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~-~---~~~~~D~~~-~~~~~~~~~~~~~~g~id~lv~   76 (239)
T 2ekp_A            2 ERKALVTGGSRGIGRAIAEALVARGYRVAIASRNPEEAAQSLG-A---VPLPTDLEK-DDPKGLVKRALEALGGLHVLVH   76 (239)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHT-C---EEEECCTTT-SCHHHHHHHHHHHHTSCCEEEE
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhhC-c---EEEecCCch-HHHHHHHHHHHHHcCCCCEEEE
Confidence            4689999999999999999999999999999998765221111 1   134568888 7666544       37999999


Q ss_pred             CCCCCCC---CCCChhhHHHHHHHhhhhHHHHHHHHHcC--CCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCChh-HH
Q 018503          123 LAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-LA  196 (355)
Q Consensus       123 ~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~~y-~~  196 (355)
                      +||....   ...+.+.+...+++|+.++..+++++...  ..+.+++|++||...  +....       .+....| .+
T Consensus        77 ~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~--~~~~~-------~~~~~~Y~~s  147 (239)
T 2ekp_A           77 AAAVNVRKPALELSYEEWRRVLYLHLDVAFLLAQAAAPHMAEAGWGRVLFIGSVTT--FTAGG-------PVPIPAYTTA  147 (239)
T ss_dssp             CCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGG--TSCCT-------TSCCHHHHHH
T ss_pred             CCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhh--ccCCC-------CCCCccHHHH
Confidence            9997432   23456778899999999999888877321  035689999999876  43210       1334567 77


Q ss_pred             HHHHHHHHHHhccC---CCCeEEEEEecEEEeCCCCcccchHHHHH-HHhCCCCCCCCcceecccHHHHHHHHHHHHhCC
Q 018503          197 EVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFM-MFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNP  272 (355)
Q Consensus       197 k~~~~~~~~~~~~~---~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~  272 (355)
                      |...+.+...+..+   .|+++++++||.+.++............. .....+.      ..+...+|+|++++.++..+
T Consensus       148 K~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~p~------~~~~~~~dvA~~~~~l~s~~  221 (239)
T 2ekp_A          148 KTALLGLTRALAKEWARLGIRVNLLCPGYVETEFTLPLRQNPELYEPITARIPM------GRWARPEEIARVAAVLCGDE  221 (239)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTCHHHHHHHHTTCTT------SSCBCHHHHHHHHHHHTSGG
T ss_pred             HHHHHHHHHHHHHHhhhcCcEEEEEEeCCccCchhhccccCHHHHHHHHhcCCC------CCCcCHHHHHHHHHHHcCch
Confidence            77666655544432   48999999999998774221100001111 1111121      24789999999999999753


Q ss_pred             C---CCCceEecCCC
Q 018503          273 S---YRGVINGTAPN  284 (355)
Q Consensus       273 ~---~~~~~~i~~~~  284 (355)
                      .   .+..+++.+|.
T Consensus       222 ~~~~tG~~~~vdgG~  236 (239)
T 2ekp_A          222 AEYLTGQAVAVDGGF  236 (239)
T ss_dssp             GTTCCSCEEEESTTT
T ss_pred             hcCCCCCEEEECCCc
Confidence            2   34477777764

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*

Probab=99.83  E-value=5.6e-20  Score=158.36  Aligned_cols=223  Identities=13%  Similarity=0.050  Sum_probs=146.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCch-hhccCCC-----CCCccCCCeeecCCcchhhhcC-------
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSK-AELIFPG-----KKTRFFPGVMIAEEPQWRDCIQ-------  115 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~-~~~~~~~-----~~~~~~~~~d~~~~~~~~~~~~-------  115 (355)
                      +.++|+||||+|+||+++++.|+++|++|++++|+.+. .......     ........+|+.|++++.++++       
T Consensus         3 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   82 (260)
T 1x1t_A            3 KGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQMG   82 (260)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHhccCCcEEEEECCCCCHHHHHHHHHHHHHhcC
Confidence            35789999999999999999999999999999998765 3321100     0001134579999888877664       


Q ss_pred             CCcEEEECCCCCCC---CCCChhhHHHHHHHhhhhHHHHHHHHHcC--CCCCCcEEEEeeeeeeeeCCCCCccccCCCCC
Q 018503          116 GSTAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPS  190 (355)
Q Consensus       116 ~~d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~  190 (355)
                      ++|++||+||....   .....+.+...+++|+.++.++++++...  ..+.+++|++||...  +..         .+.
T Consensus        83 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~--~~~---------~~~  151 (260)
T 1x1t_A           83 RIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHG--LVA---------SAN  151 (260)
T ss_dssp             CCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGG--TSC---------CTT
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECcHHh--CcC---------CCC
Confidence            69999999997532   23456777889999999999888877421  035679999999876  321         123


Q ss_pred             CChh-HHHHHHHHHHHHhcc---CCCCeEEEEEecEEEeCCCCcc-cchHHH-----HHHHhCCCC-CCCCcceecccHH
Q 018503          191 GNDY-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGAL-AKMIPL-----FMMFAGGPL-GSGQQWFSWIHLD  259 (355)
Q Consensus       191 ~~~y-~~k~~~~~~~~~~~~---~~~~~~~i~Rp~~i~G~~~~~~-~~~~~~-----~~~~~~~~~-~~~~~~~~~i~v~  259 (355)
                      ...| .+|...+.+.+.+..   ..|++++.++||.+.++..... ......     .....  .+ ........+.+.+
T Consensus       152 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~p~~~~~~p~  229 (260)
T 1x1t_A          152 KSAYVAAKHGVVGFTKVTALETAGQGITANAICPGWVRTPLVEKQISALAEKNGVDQETAAR--ELLSEKQPSLQFVTPE  229 (260)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC--------------------------CHHHHCTTCCCBCHH
T ss_pred             CchHHHHHHHHHHHHHHHHHHhccCCEEEEEEeecCccCchHHHhhhhhccccCCchHHHHH--HHhhccCCCCCCcCHH
Confidence            4567 778766665554433   3489999999999988753211 000000     00000  00 0001123578999


Q ss_pred             HHHHHHHHHHhCCC---CCCceEecCCC
Q 018503          260 DIVNLIYEALSNPS---YRGVINGTAPN  284 (355)
Q Consensus       260 Dva~~~~~~~~~~~---~~~~~~i~~~~  284 (355)
                      |+|++++.++....   .+..+++.+|.
T Consensus       230 dva~~~~~l~s~~~~~~tG~~~~vdgG~  257 (260)
T 1x1t_A          230 QLGGTAVFLASDAAAQITGTTVSVDGGW  257 (260)
T ss_dssp             HHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             HHHHHHHHHhChhhcCCCCCEEEECCCc
Confidence            99999999997542   35588887764

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}

Probab=99.82  E-value=5.1e-20  Score=160.97  Aligned_cols=218  Identities=17%  Similarity=0.077  Sum_probs=151.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccC----CCC-CCccCCCeeecCCcchhhhcC-------C
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIF----PGK-KTRFFPGVMIAEEPQWRDCIQ-------G  116 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~~~-~~~~~~~~d~~~~~~~~~~~~-------~  116 (355)
                      .+++||||||+|+||++++++|+++|++|++++|+.+......    ... .......+|+.|.+++.++++       +
T Consensus        40 ~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  119 (293)
T 3rih_A           40 SARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSDPGSCADAARTVVDAFGA  119 (293)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTSSSSCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHHHHHHcCC
Confidence            4578999999999999999999999999999999987644321    111 111134578889887776653       6


Q ss_pred             CcEEEECCCCCCC---CCCChhhHHHHHHHhhhhHHHHHHHHH----cCCCCCCcEEEEeeeeeeeeCCCCCccccCCCC
Q 018503          117 STAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLIN----ESPEGVRPSVLVSATALGYYGTSETEVFDESSP  189 (355)
Q Consensus       117 ~d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~~----~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~  189 (355)
                      +|++||+||....   ...+.+.+...+++|+.++.++++++.    +  .+..++|++||.....++          .+
T Consensus       120 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~--~~~g~iV~isS~~~~~~~----------~~  187 (293)
T 3rih_A          120 LDVVCANAGIFPEARLDTMTPEQLSEVLDVNVKGTVYTVQACLAPLTA--SGRGRVILTSSITGPVTG----------YP  187 (293)
T ss_dssp             CCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHTHHHHHH--HSSCEEEEECCSBTTTBB----------CT
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHH--cCCCEEEEEeChhhccCC----------CC
Confidence            8999999997533   244667788999999999999998873    3  356799999997641011          12


Q ss_pred             CCChh-HHHHHHHHHHHHhccC---CCCeEEEEEecEEEeCCCCcccchHHHH-HHHhCCCCCCCCcceecccHHHHHHH
Q 018503          190 SGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLF-MMFAGGPLGSGQQWFSWIHLDDIVNL  264 (355)
Q Consensus       190 ~~~~y-~~k~~~~~~~~~~~~~---~~~~~~i~Rp~~i~G~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~v~Dva~~  264 (355)
                      ....| .+|...+.+.+.+..+   .|+++..++||.++++......  -... ......++      ..+...+|+|++
T Consensus       188 ~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~--~~~~~~~~~~~p~------~r~~~p~dvA~~  259 (293)
T 3rih_A          188 GWSHYGASKAAQLGFMRTAAIELAPRGVTVNAILPGNILTEGLVDMG--EEYISGMARSIPM------GMLGSPVDIGHL  259 (293)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHTC--HHHHHHHHTTSTT------SSCBCHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCCcCcchhhcc--HHHHHHHHhcCCC------CCCCCHHHHHHH
Confidence            34567 7787666665554433   4899999999999987421110  0111 12222222      236789999999


Q ss_pred             HHHHHhCCC---CCCceEecCCCcc
Q 018503          265 IYEALSNPS---YRGVINGTAPNPV  286 (355)
Q Consensus       265 ~~~~~~~~~---~~~~~~i~~~~~~  286 (355)
                      ++.++....   .+..+++.+|..+
T Consensus       260 v~fL~s~~a~~itG~~i~vdGG~~~  284 (293)
T 3rih_A          260 AAFLATDEAGYITGQAIVVDGGQVL  284 (293)
T ss_dssp             HHHHHSGGGTTCCSCEEEESTTTTC
T ss_pred             HHHHhCccccCCCCCEEEECCCccC
Confidence            999997543   4558888888644

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}

Probab=99.82  E-value=1.9e-20  Score=160.08  Aligned_cols=217  Identities=12%  Similarity=0.095  Sum_probs=136.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEE-ecCCchhhccCC----CCCCccCCCeeecCCcchhhhcC-------C
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVL-TRSRSKAELIFP----GKKTRFFPGVMIAEEPQWRDCIQ-------G  116 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~-~r~~~~~~~~~~----~~~~~~~~~~d~~~~~~~~~~~~-------~  116 (355)
                      .+|+|+||||+|+||++++++|+++|++|+++ .|+.........    .........+|+.|++++.++++       +
T Consensus         4 ~~~~vlItGasggiG~~~a~~l~~~G~~V~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   83 (247)
T 2hq1_A            4 KGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGINVVVAKGDVKNPEDVENMVKTAMDAFGR   83 (247)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECTTCSHHHHHHHHHHHTTCCEEEEESCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCcEEEEECCCchHHHHHHHHHHHCCCEEEEEcCcCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence            34789999999999999999999999999999 566544322110    01001134578888888877664       7


Q ss_pred             CcEEEECCCCCCCC---CCChhhHHHHHHHhhhhHHHHHHHHHcC--CCCCCcEEEEeeeeeeeeCCCCCccccCCCCCC
Q 018503          117 STAVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSG  191 (355)
Q Consensus       117 ~d~vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~  191 (355)
                      +|+|||+||.....   ..+.+.+...+++|+.++.++++++...  ..+.+++|++||.... |+.          +..
T Consensus        84 ~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~-~~~----------~~~  152 (247)
T 2hq1_A           84 IDILVNNAGITRDTLMLKMSEKDWDDVLNTNLKSAYLCTKAVSKIMLKQKSGKIINITSIAGI-IGN----------AGQ  152 (247)
T ss_dssp             CCEEEECC---------------CHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECC--------------------C
T ss_pred             CCEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhc-cCC----------CCC
Confidence            99999999975321   2234556788999999988887776431  0356799999997542 432          223


Q ss_pred             Chh-HHHHHHHHHHHHhccC---CCCeEEEEEecEEEeCCCCcccchHHHH-HHHhCCCCCCCCcceecccHHHHHHHHH
Q 018503          192 NDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLF-MMFAGGPLGSGQQWFSWIHLDDIVNLIY  266 (355)
Q Consensus       192 ~~y-~~k~~~~~~~~~~~~~---~~~~~~i~Rp~~i~G~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~v~Dva~~~~  266 (355)
                      ..| .+|...+.+...+..+   .++++++++|+.+.++.......  ... ....+.+      ...+++++|+|++++
T Consensus       153 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~--~~~~~~~~~~~------~~~~~~~~dva~~~~  224 (247)
T 2hq1_A          153 ANYAASKAGLIGFTKSIAKEFAAKGIYCNAVAPGIIKTDMTDVLPD--KVKEMYLNNIP------LKRFGTPEEVANVVG  224 (247)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSCH--HHHHHHHTTST------TSSCBCHHHHHHHHH
T ss_pred             cHhHHHHHHHHHHHHHHHHHHHHcCcEEEEEEEEEEeccchhhcch--HHHHHHHhhCC------CCCCCCHHHHHHHHH
Confidence            567 7777666655554332   48999999999987653211110  011 1122222      235889999999999


Q ss_pred             HHHhCCC---CCCceEecCCC
Q 018503          267 EALSNPS---YRGVINGTAPN  284 (355)
Q Consensus       267 ~~~~~~~---~~~~~~i~~~~  284 (355)
                      .++..+.   .+..|++.+|.
T Consensus       225 ~l~~~~~~~~~G~~~~v~gG~  245 (247)
T 2hq1_A          225 FLASDDSNYITGQVINIDGGL  245 (247)
T ss_dssp             HHHSGGGTTCCSCEEEESTTC
T ss_pred             HHcCcccccccCcEEEeCCCc
Confidence            9987542   34589998875

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*

Probab=99.82  E-value=5.2e-20  Score=158.35  Aligned_cols=213  Identities=13%  Similarity=0.016  Sum_probs=138.4

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcC----CCcEEEECCCC
Q 018503           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ----GSTAVVNLAGT  126 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~----~~d~vi~~a~~  126 (355)
                      ++|+||||+|+||++++++|+++|++|++++|+.+....         ...+|+.|.+++.++++    ++|++||+||.
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~---------~~~~Dl~~~~~v~~~~~~~~~~id~lv~~Ag~   72 (257)
T 1fjh_A            2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEVIA---------DLSTAEGRKQAIADVLAKCSKGMDGLVLCAGL   72 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC---------CTTSHHHHHHHHHHHHTTCTTCCSEEEECCCC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhhcc---------ccccCCCCHHHHHHHHHHhCCCCCEEEECCCC
Confidence            589999999999999999999999999999998765332         13479999988888775    45999999997


Q ss_pred             CCCCCCChhhHHHHHHHhhhhHHHHHHHHHcC--CCCCCcEEEEeeeeeeeeCCCCCccc-----cCC------------
Q 018503          127 PIGTRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVF-----DES------------  187 (355)
Q Consensus       127 ~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~~~~v~~Ss~~~~~yg~~~~~~~-----~e~------------  187 (355)
                      ...    ...++..+++|+.++.++++++...  ..+.+++|++||...  +......+.     .+.            
T Consensus        73 ~~~----~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  146 (257)
T 1fjh_A           73 GPQ----TKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVAS--AHLAFDKNPLALALEAGEEAKARAIVEHA  146 (257)
T ss_dssp             CTT----CSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGG--GSSCGGGCTTHHHHHHTCHHHHHHHHHTC
T ss_pred             CCC----cccHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEECChhh--hccccccchhhhhhcccchhhhhhhhhcc
Confidence            421    1236789999999999998887531  145679999999877  521111000     000            


Q ss_pred             CC--CCChh-HHHHHHHHHHHHhccC---CCCeEEEEEecEEEeCCCCcc-cc-hHHHHHHHhCCCCCCCCcceecccHH
Q 018503          188 SP--SGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGAL-AK-MIPLFMMFAGGPLGSGQQWFSWIHLD  259 (355)
Q Consensus       188 ~~--~~~~y-~~k~~~~~~~~~~~~~---~~~~~~i~Rp~~i~G~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~i~v~  259 (355)
                      .+  ....| .+|...+.+...+..+   .|+++++++||.+.++..... .. ...  .....  +  ......+.+.+
T Consensus       147 ~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~--~~~~~--~--~~~~~~~~~~~  220 (257)
T 1fjh_A          147 GEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQDPRYG--ESIAK--F--VPPMGRRAEPS  220 (257)
T ss_dssp             CTTHHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC-------------------------C--CCSTTSCCCTH
T ss_pred             cCCCCccHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCccchhhccchhHH--HHHHh--c--ccccCCCCCHH
Confidence            11  22356 7777666666555443   589999999999988753221 00 000  00000  0  01112478999


Q ss_pred             HHHHHHHHHHhCCC---CCCceEecCCC
Q 018503          260 DIVNLIYEALSNPS---YRGVINGTAPN  284 (355)
Q Consensus       260 Dva~~~~~~~~~~~---~~~~~~i~~~~  284 (355)
                      |+|++++.++..+.   .+..+++.+|.
T Consensus       221 dvA~~~~~l~~~~~~~~tG~~~~vdgG~  248 (257)
T 1fjh_A          221 EMASVIAFLMSPAASYVHGAQIVIDGGI  248 (257)
T ss_dssp             HHHHHHHHHTSGGGTTCCSCEEEESTTH
T ss_pred             HHHHHHHHHhCchhcCCcCCEEEECCCc
Confidence            99999999997642   34477777764

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0

Probab=99.82  E-value=2.7e-20  Score=160.81  Aligned_cols=220  Identities=13%  Similarity=0.073  Sum_probs=149.2

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhcc----CCC-CCCccCCCeeecCCcchhhhcC-------CC
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELI----FPG-KKTRFFPGVMIAEEPQWRDCIQ-------GS  117 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~----~~~-~~~~~~~~~d~~~~~~~~~~~~-------~~  117 (355)
                      +++++||||+|+||++++++|+++|++|++++|+.......    ... ........+|+.|.+++.++++       ++
T Consensus         7 ~k~vlVTGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i   86 (264)
T 3i4f_A            7 VRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDVEERLQFVQADVTKKEDLHKIVEEAMSHFGKI   86 (264)
T ss_dssp             CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTGGGGGGEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             cCEEEEeCCCchhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence            46899999999999999999999999999998876442211    100 0001134578889888877764       78


Q ss_pred             cEEEECCCC--CC---CCCCChhhHHHHHHHhhhhHHHHHHHH----HcCCCCCCcEEEEeeeeeeeeCCCCCccccCCC
Q 018503          118 TAVVNLAGT--PI---GTRWSSEIKKEIKESRIRVTSKVVDLI----NESPEGVRPSVLVSATALGYYGTSETEVFDESS  188 (355)
Q Consensus       118 d~vi~~a~~--~~---~~~~~~~~~~~~~~~n~~~~~~l~~a~----~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~  188 (355)
                      |++||+||.  ..   ......+.+...+++|+.++..+++++    ++  .+..++|++||.+.  ++..       ..
T Consensus        87 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~~~g~iv~iss~~~--~~~~-------~~  155 (264)
T 3i4f_A           87 DFLINNAGPYVFERKKLVDYEEDEWNEMIQGNLTAVFHLLKLVVPVMRK--QNFGRIINYGFQGA--DSAP-------GW  155 (264)
T ss_dssp             CEEECCCCCCCCSCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH--HTCEEEEEECCTTG--GGCC-------CC
T ss_pred             CEEEECCcccccCCCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHh--cCCCeEEEEeechh--cccC-------CC
Confidence            999999993  21   123456777889999999999999887    44  45678999998754  2111       12


Q ss_pred             CCCChh-HHHHHHHHHHHHhccC---CCCeEEEEEecEEEeCCCCcccchHHHHHHHhCCCCCCCCcceecccHHHHHHH
Q 018503          189 PSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNL  264 (355)
Q Consensus       189 ~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~  264 (355)
                      +....| .+|...+.+.+.+..+   .|+++..++||.++++.....   ........    ........+.+.+|+|++
T Consensus       156 ~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~---~~~~~~~~----~~~~p~~r~~~~~dva~~  228 (264)
T 3i4f_A          156 IYRSAFAAAKVGLVSLTKTVAYEEAEYGITANMVCPGDIIGEMKEAT---IQEARQLK----EHNTPIGRSGTGEDIART  228 (264)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCGGGGSCC---HHHHHHC------------CCCCHHHHHHH
T ss_pred             CCCchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEccCCccCccchhc---cHHHHHHH----hhcCCCCCCcCHHHHHHH
Confidence            234567 7787666665554443   589999999999998754322   11111000    011122347899999999


Q ss_pred             HHHHHhCCC---CCCceEecCCCccC
Q 018503          265 IYEALSNPS---YRGVINGTAPNPVR  287 (355)
Q Consensus       265 ~~~~~~~~~---~~~~~~i~~~~~~s  287 (355)
                      ++.++....   .+.++++.+|....
T Consensus       229 v~~l~s~~~~~itG~~i~vdGG~~~~  254 (264)
T 3i4f_A          229 ISFLCEDDSDMITGTIIEVTGAVDVI  254 (264)
T ss_dssp             HHHHHSGGGTTCCSCEEEESCSCCCC
T ss_pred             HHHHcCcccCCCCCcEEEEcCceeec
Confidence            999998643   45689998886543

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}

Probab=99.82  E-value=6.4e-20  Score=158.63  Aligned_cols=213  Identities=12%  Similarity=0.056  Sum_probs=148.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcC-------CCcEEE
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ-------GSTAVV  121 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-------~~d~vi  121 (355)
                      .+++||||||+|+||++++++|+++|++|++++|+........      ....+|+.|.+++.++++       ++|++|
T Consensus        13 ~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~------~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lv   86 (269)
T 3vtz_A           13 TDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSDVNVS------DHFKIDVTNEEEVKEAVEKTTKKYGRIDILV   86 (269)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCC--CTTSS------EEEECCTTCHHHHHHHHHHHHHHHSCCCEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhccCce------eEEEecCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            4579999999999999999999999999999999876543211      134579999988877664       789999


Q ss_pred             ECCCCCCC---CCCChhhHHHHHHHhhhhHHHHHHHHHcC--CCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCChh-H
Q 018503          122 NLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-L  195 (355)
Q Consensus       122 ~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~~y-~  195 (355)
                      |+||....   ...+.+.+...+++|+.++..+++++...  ..+.+++|++||...  |..         .+....| .
T Consensus        87 ~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~--~~~---------~~~~~~Y~a  155 (269)
T 3vtz_A           87 NNAGIEQYSPLHLTPTEIWRRIIDVNVNGSYLMAKYTIPVMLAIGHGSIINIASVQS--YAA---------TKNAAAYVT  155 (269)
T ss_dssp             ECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGG--TSB---------CTTCHHHHH
T ss_pred             ECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhh--ccC---------CCCChhHHH
Confidence            99997533   23355667889999999999888876431  135678999999876  432         1234567 7


Q ss_pred             HHHHHHHHHHHhccCC--CCeEEEEEecEEEeCCCCccc--------ch-HHHH-HHHhCCCCCCCCcceecccHHHHHH
Q 018503          196 AEVCREWEGTALKVNK--DVRLALIRIGIVLGKDGGALA--------KM-IPLF-MMFAGGPLGSGQQWFSWIHLDDIVN  263 (355)
Q Consensus       196 ~k~~~~~~~~~~~~~~--~~~~~i~Rp~~i~G~~~~~~~--------~~-~~~~-~~~~~~~~~~~~~~~~~i~v~Dva~  263 (355)
                      +|...+.+.+.+..+.  ++++..++||.+.++......        .. .... ......+      ...+.+.+|+|+
T Consensus       156 sKaa~~~l~~~la~e~~~~i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p------~~r~~~pedvA~  229 (269)
T 3vtz_A          156 SKHALLGLTRSVAIDYAPKIRCNAVCPGTIMTPMVIKAAKMEVGEDENAVERKIEEWGRQHP------MGRIGRPEEVAE  229 (269)
T ss_dssp             HHHHHHHHHHHHHHHHTTTEEEEEEEECSBCCHHHHHHHHHHHCCSTTHHHHHHHHHHHHST------TSSCBCHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhcCCCEEEEEEECCCcCcchhhhhhccccccchhhHHHHHHHHhcCC------CCCCcCHHHHHH
Confidence            8877776666554433  799999999999876311100        00 0011 1111112      234789999999


Q ss_pred             HHHHHHhCCC---CCCceEecCCC
Q 018503          264 LIYEALSNPS---YRGVINGTAPN  284 (355)
Q Consensus       264 ~~~~~~~~~~---~~~~~~i~~~~  284 (355)
                      +++.++....   .+..+++.+|.
T Consensus       230 ~v~~L~s~~~~~itG~~i~vdGG~  253 (269)
T 3vtz_A          230 VVAFLASDRSSFITGACLTVDGGL  253 (269)
T ss_dssp             HHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             HHHHHhCCccCCCcCcEEEECCCc
Confidence            9999998543   45588888875

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0

Probab=99.82  E-value=6.8e-20  Score=158.76  Aligned_cols=221  Identities=17%  Similarity=0.091  Sum_probs=149.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhc---cCCCCCCccCCCeeecCCcchhhhc------CCCcE
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAEL---IFPGKKTRFFPGVMIAEEPQWRDCI------QGSTA  119 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~---~~~~~~~~~~~~~d~~~~~~~~~~~------~~~d~  119 (355)
                      .+++++||||+|+||++++++|+++|++|++++|+......   +...........+|+.|.+++.++.      .++|+
T Consensus        30 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~g~iD~  109 (273)
T 3uf0_A           30 AGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRTDGVKEVADEIADGGGSAEAVVADLADLEGAANVAEELAATRRVDV  109 (273)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTHHHHHHHHHHTTTCEEEEEECCTTCHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHhcCCCcE
Confidence            45799999999999999999999999999999976532211   1111111113346888888776554      37999


Q ss_pred             EEECCCCCCC---CCCChhhHHHHHHHhhhhHHHHHHHHHcC--CCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCChh
Q 018503          120 VVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY  194 (355)
Q Consensus       120 vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~~y  194 (355)
                      +||+||....   ...+.+.+...+++|+.++..+++++...  ..+..++|++||...  +..         .+....|
T Consensus       110 lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~--~~~---------~~~~~~Y  178 (273)
T 3uf0_A          110 LVNNAGIIARAPAEEVSLGRWREVLTVNLDAAWVLSRSFGTAMLAHGSGRIVTIASMLS--FQG---------GRNVAAY  178 (273)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGG--TSC---------CSSCHHH
T ss_pred             EEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchHh--cCC---------CCCChhH
Confidence            9999997533   23456778899999999999998876321  135678999999876  321         1234567


Q ss_pred             -HHHHHHHHHHHHhccC---CCCeEEEEEecEEEeCCCCcccchHHHH-HHHhCCCCCCCCcceecccHHHHHHHHHHHH
Q 018503          195 -LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLF-MMFAGGPLGSGQQWFSWIHLDDIVNLIYEAL  269 (355)
Q Consensus       195 -~~k~~~~~~~~~~~~~---~~~~~~i~Rp~~i~G~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~  269 (355)
                       .+|...+.+.+.+..+   .|+++..++||.+.++............ ......+.      ..+...+|+|++++.++
T Consensus       179 ~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~------~r~~~pedva~~v~~L~  252 (273)
T 3uf0_A          179 AASKHAVVGLTRALASEWAGRGVGVNALAPGYVVTANTAALRADDERAAEITARIPA------GRWATPEDMVGPAVFLA  252 (273)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTSHHHHHHHHHHSTT------SSCBCGGGGHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCchhhcccCHHHHHHHHhcCCC------CCCCCHHHHHHHHHHHh
Confidence             7787776666555443   5899999999999987532111000111 11122222      24788999999999999


Q ss_pred             hCCC---CCCceEecCCCcc
Q 018503          270 SNPS---YRGVINGTAPNPV  286 (355)
Q Consensus       270 ~~~~---~~~~~~i~~~~~~  286 (355)
                      ....   .+..+++.+|...
T Consensus       253 s~~a~~itG~~i~vdGG~~~  272 (273)
T 3uf0_A          253 SDAASYVHGQVLAVDGGWLA  272 (273)
T ss_dssp             SGGGTTCCSCEEEESTTGGG
T ss_pred             CchhcCCcCCEEEECcCccC
Confidence            8643   4558889887644

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2

Probab=99.82  E-value=8.3e-20  Score=155.82  Aligned_cols=197  Identities=15%  Similarity=0.093  Sum_probs=141.1

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCC-------eEEEEecCCchhhccCC----CCCCccCCCeeecCCcchhhhcC---
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNH-------QVRVLTRSRSKAELIFP----GKKTRFFPGVMIAEEPQWRDCIQ---  115 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~-------~V~~~~r~~~~~~~~~~----~~~~~~~~~~d~~~~~~~~~~~~---  115 (355)
                      +++|+||||+|+||++++++|+++|+       +|++++|+.+.......    .........+|+.|++++.++++   
T Consensus         2 ~k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~   81 (244)
T 2bd0_A            2 KHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIV   81 (244)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHHccCCeeeEEEecCCCHHHHHHHHHHHH
Confidence            36899999999999999999999999       99999998765432211    01001134578888888877664   


Q ss_pred             ----CCcEEEECCCCCCC---CCCChhhHHHHHHHhhhhHHHHHHHHHcC--CCCCCcEEEEeeeeeeeeCCCCCccccC
Q 018503          116 ----GSTAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDE  186 (355)
Q Consensus       116 ----~~d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~~~~v~~Ss~~~~~yg~~~~~~~~e  186 (355)
                          ++|+|||+||....   .....+.+...+++|+.++.++++++...  ..+.+++|++||...  +..        
T Consensus        82 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~--~~~--------  151 (244)
T 2bd0_A           82 ERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAA--TKA--------  151 (244)
T ss_dssp             HHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGG--TSC--------
T ss_pred             HhCCCCCEEEEcCCcCCcCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEEecchh--cCC--------
Confidence                69999999997532   12356777889999999999998887421  035679999999876  431        


Q ss_pred             CCCCCChh-HHHHHHHHHHHHhcc---CCCCeEEEEEecEEEeCCCCcccchHHHHHHHhCCCCCCCCcceecccHHHHH
Q 018503          187 SSPSGNDY-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIV  262 (355)
Q Consensus       187 ~~~~~~~y-~~k~~~~~~~~~~~~---~~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva  262 (355)
                       .+....| .+|...+.+...+..   ..|++++++|||.++++.......               .. ...+++.+|+|
T Consensus       152 -~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~---------------~~-~~~~~~~~dva  214 (244)
T 2bd0_A          152 -FRHSSIYCMSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGKVDD---------------EM-QALMMMPEDIA  214 (244)
T ss_dssp             -CTTCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTCCCCS---------------TT-GGGSBCHHHHH
T ss_pred             -CCCCchhHHHHHHHHHHHHHHHHHhhccCcEEEEEECCCccchhhhhccc---------------cc-cccCCCHHHHH
Confidence             1234567 777766665543332   458999999999999985432110               00 13589999999


Q ss_pred             HHHHHHHhCCC
Q 018503          263 NLIYEALSNPS  273 (355)
Q Consensus       263 ~~~~~~~~~~~  273 (355)
                      ++++.++..+.
T Consensus       215 ~~~~~l~~~~~  225 (244)
T 2bd0_A          215 APVVQAYLQPS  225 (244)
T ss_dssp             HHHHHHHTSCT
T ss_pred             HHHHHHHhCCc
Confidence            99999998764

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}

Probab=99.82  E-value=2.6e-20  Score=159.51  Aligned_cols=204  Identities=12%  Similarity=0.063  Sum_probs=147.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcC-------CCcEEE
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ-------GSTAVV  121 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-------~~d~vi  121 (355)
                      |+++|+||||+|+||++++++|+++|++|++++|+.......        ...+|+.|.+++.++++       .+|+||
T Consensus        21 m~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~--------~~~~d~~d~~~v~~~~~~~~~~~g~iD~li   92 (251)
T 3orf_A           21 MSKNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPNADH--------SFTIKDSGEEEIKSVIEKINSKSIKVDTFV   92 (251)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTTSSE--------EEECSCSSHHHHHHHHHHHHTTTCCEEEEE
T ss_pred             cCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCccccccc--------ceEEEeCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            457899999999999999999999999999999988654321        23367888887776653       579999


Q ss_pred             ECCCCCCC----CCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCChh-HH
Q 018503          122 NLAGTPIG----TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-LA  196 (355)
Q Consensus       122 ~~a~~~~~----~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~~y-~~  196 (355)
                      |+||....    .....+.+...+++|+.++.++++++........++|++||...  +..         .+....| .+
T Consensus        93 ~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~--~~~---------~~~~~~Y~~s  161 (251)
T 3orf_A           93 CAAGGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQGGLFVLTGASAA--LNR---------TSGMIAYGAT  161 (251)
T ss_dssp             ECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGG--GSC---------CTTBHHHHHH
T ss_pred             ECCccCCCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhccCCEEEEEechhh--ccC---------CCCCchhHHH
Confidence            99997422    23345667888999999999999988652112358999999876  321         1234567 88


Q ss_pred             HHHHHHHHHHhccC-----CCCeEEEEEecEEEeCCCCcccchHHHHHHHhCCCCCCCCcceecccHHHHHHHHHHHHhC
Q 018503          197 EVCREWEGTALKVN-----KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSN  271 (355)
Q Consensus       197 k~~~~~~~~~~~~~-----~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~  271 (355)
                      |...+.+.+.+..+     .++++..++||.+.++.       ..  ...      .......+++.+|+|++++.++..
T Consensus       162 Kaa~~~~~~~la~e~~~~~~gi~v~~v~PG~v~t~~-------~~--~~~------~~~~~~~~~~~~dva~~i~~l~~~  226 (251)
T 3orf_A          162 KAATHHIIKDLASENGGLPAGSTSLGILPVTLDTPT-------NR--KYM------SDANFDDWTPLSEVAEKLFEWSTN  226 (251)
T ss_dssp             HHHHHHHHHHHTSTTSSSCTTCEEEEEEESCBCCHH-------HH--HHC------TTSCGGGSBCHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHHHhcccCCCcEEEEEecCcCcCcc-------hh--hhc------ccccccccCCHHHHHHHHHHHhcC
Confidence            88888777776665     58999999999887652       11  001      112234578999999999999988


Q ss_pred             -C--C-CCCceEecCCCcc
Q 018503          272 -P--S-YRGVINGTAPNPV  286 (355)
Q Consensus       272 -~--~-~~~~~~i~~~~~~  286 (355)
                       .  . .+..+++.+++..
T Consensus       227 ~~~~~~tG~~i~v~~g~~~  245 (251)
T 3orf_A          227 SDSRPTNGSLVKFETKSKV  245 (251)
T ss_dssp             GGGCCCTTCEEEEEEETTE
T ss_pred             ccccCCcceEEEEecCCcc
Confidence             2  2 3457888766543

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2

Probab=99.82  E-value=6.1e-20  Score=156.92  Aligned_cols=220  Identities=13%  Similarity=0.043  Sum_probs=151.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCC----CCCccCCCeeecCCcchhhhcC-------CC
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG----KKTRFFPGVMIAEEPQWRDCIQ-------GS  117 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~----~~~~~~~~~d~~~~~~~~~~~~-------~~  117 (355)
                      ++++++||||+|+||++++++|+++|++|++++|+.+........    ........+|+.|.+++.++++       ++
T Consensus         4 ~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   83 (247)
T 3lyl_A            4 NEKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKGFKARGLVLNISDIESIQNFFAEIKAENLAI   83 (247)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHTTCCC
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            357899999999999999999999999999999987654432110    1111134578888888776663       58


Q ss_pred             cEEEECCCCCCC---CCCChhhHHHHHHHhhhhHHHHHHHHHcC--CCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCC
Q 018503          118 TAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGN  192 (355)
Q Consensus       118 d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~  192 (355)
                      |++||+||....   ...+.+.+...+++|+.++.++++++...  ..+..++|++||...  +..         .+...
T Consensus        84 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~--~~~---------~~~~~  152 (247)
T 3lyl_A           84 DILVNNAGITRDNLMMRMSEDEWQSVINTNLSSIFRMSKECVRGMMKKRWGRIISIGSVVG--SAG---------NPGQT  152 (247)
T ss_dssp             SEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHH--HHC---------CTTCH
T ss_pred             CEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhh--ccC---------CCCcH
Confidence            999999997533   23456777889999999999988876431  134568999999765  321         12345


Q ss_pred             hh-HHHHHHHHHHHHhcc---CCCCeEEEEEecEEEeCCCCcccchHHHHHHHhCCCCCCCCcceecccHHHHHHHHHHH
Q 018503          193 DY-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEA  268 (355)
Q Consensus       193 ~y-~~k~~~~~~~~~~~~---~~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~  268 (355)
                      .| .+|...+.+.+.+..   ..|+++..++||.+..+.........  ......     ......+.+.+|+|++++.+
T Consensus       153 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~--~~~~~~-----~~~~~~~~~~~dva~~i~~l  225 (247)
T 3lyl_A          153 NYCAAKAGVIGFSKSLAYEVASRNITVNVVAPGFIATDMTDKLTDEQ--KSFIAT-----KIPSGQIGEPKDIAAAVAFL  225 (247)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTTSCHHH--HHHHHT-----TSTTCCCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHcCeEEEEEeeCcEecccchhccHHH--HHHHhh-----cCCCCCCcCHHHHHHHHHHH
Confidence            67 778766555554443   24899999999999887543321111  111111     11224588999999999999


Q ss_pred             HhCCC---CCCceEecCCCcc
Q 018503          269 LSNPS---YRGVINGTAPNPV  286 (355)
Q Consensus       269 ~~~~~---~~~~~~i~~~~~~  286 (355)
                      +....   .+..+++.+|..+
T Consensus       226 ~s~~~~~~tG~~i~vdgG~~~  246 (247)
T 3lyl_A          226 ASEEAKYITGQTLHVNGGMYM  246 (247)
T ss_dssp             HSGGGTTCCSCEEEESTTSSC
T ss_pred             hCCCcCCccCCEEEECCCEec
Confidence            97543   4568999887643

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0

Probab=99.82  E-value=1.4e-20  Score=164.52  Aligned_cols=234  Identities=13%  Similarity=0.016  Sum_probs=151.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchh------------hcc----CCCCCCccCCCeeecCCcchhh
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKA------------ELI----FPGKKTRFFPGVMIAEEPQWRD  112 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~------------~~~----~~~~~~~~~~~~d~~~~~~~~~  112 (355)
                      .+++||||||+|+||++++++|+++|++|++++|+....            ...    ...........+|+.|.+++.+
T Consensus         9 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~   88 (287)
T 3pxx_A            9 QDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVRDRAAVSR   88 (287)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHH
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCCCHHHHHH
Confidence            457899999999999999999999999999999973211            100    0001111134578889888877


Q ss_pred             hcC-------CCcEEEECCCCCCC-CCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCCCCccc
Q 018503          113 CIQ-------GSTAVVNLAGTPIG-TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVF  184 (355)
Q Consensus       113 ~~~-------~~d~vi~~a~~~~~-~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~  184 (355)
                      +++       ++|++||+||.... .....+.+...+++|+.++.++++++...-....++|++||...  +......+.
T Consensus        89 ~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~--~~~~~~~~~  166 (287)
T 3pxx_A           89 ELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIITTGSVAG--LIAAAQPPG  166 (287)
T ss_dssp             HHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCHHH--HHHHHCCC-
T ss_pred             HHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEEeccchh--ccccccccc
Confidence            664       78999999997532 22456778899999999999999998763234468999999776  432111121


Q ss_pred             cCCCC--CCChh-HHHHHHHHHHHHhccC---CCCeEEEEEecEEEeCCCCcccchHHHH----------HHHhCCCCCC
Q 018503          185 DESSP--SGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLF----------MMFAGGPLGS  248 (355)
Q Consensus       185 ~e~~~--~~~~y-~~k~~~~~~~~~~~~~---~~~~~~i~Rp~~i~G~~~~~~~~~~~~~----------~~~~~~~~~~  248 (355)
                      .+..+  ....| .+|...+.+...+..+   .|+++..++||.+.++........ ..+          ........ .
T Consensus       167 ~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~  244 (287)
T 3pxx_A          167 AGGPQGPGGAGYSYAKQLVDSYTLQLAAQLAPQSIRANVIHPTNVNTDMLNSAPMY-RQFRPDLEAPSRADALLAFPA-M  244 (287)
T ss_dssp             ----CHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEESSBSSTTTSSHHHH-HHHCTTSSSCCHHHHHHHGGG-G
T ss_pred             ccccCCCccchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCccccccccccchh-hhhccccccchhHHHHhhhhh-h
Confidence            22221  22357 7777666665554443   389999999999988754321100 000          00000000 0


Q ss_pred             CCcceecccHHHHHHHHHHHHhCCC---CCCceEecCCCcc
Q 018503          249 GQQWFSWIHLDDIVNLIYEALSNPS---YRGVINGTAPNPV  286 (355)
Q Consensus       249 ~~~~~~~i~v~Dva~~~~~~~~~~~---~~~~~~i~~~~~~  286 (355)
                      ......+.+.+|+|++++.++....   .+..+++.+|..+
T Consensus       245 ~~~~~~~~~p~dva~~v~fL~s~~a~~itG~~i~vdGG~~~  285 (287)
T 3pxx_A          245 QAMPTPYVEASDISNAVCFLASDESRYVTGLQFKVDAGAML  285 (287)
T ss_dssp             CSSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             cccCCCCCCHHHHHhhHheecchhhcCCCCceEeECchhhh
Confidence            1111568999999999999997543   4558888888644

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2

Probab=99.82  E-value=1.3e-19  Score=156.58  Aligned_cols=220  Identities=15%  Similarity=0.032  Sum_probs=147.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCC-----CCCccCCCeeecCCcchhhhcC-------C
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-----KKTRFFPGVMIAEEPQWRDCIQ-------G  116 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-----~~~~~~~~~d~~~~~~~~~~~~-------~  116 (355)
                      ++++||||||+|+||++++++|+++|++|++++|+.+........     ........+|+.|++++.++++       +
T Consensus        20 ~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~   99 (267)
T 1vl8_A           20 RGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEKFGK   99 (267)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            347899999999999999999999999999999987654321100     0001133578888888876664       7


Q ss_pred             CcEEEECCCCCCC---CCCChhhHHHHHHHhhhhHHHHHHHHHcC--CCCCCcEEEEeeeeeeeeCCCCCccccCCCCCC
Q 018503          117 STAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSG  191 (355)
Q Consensus       117 ~d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~  191 (355)
                      +|++||+||....   .....+.+...+++|+.++.++++++...  ..+.+++|++||..+. +.         ..+..
T Consensus       100 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~-~~---------~~~~~  169 (267)
T 1vl8_A          100 LDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVE-EV---------TMPNI  169 (267)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGT-CC---------CSSSC
T ss_pred             CCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCcchh-cc---------CCCCC
Confidence            8999999997532   23456677889999999999998876321  1466799999997621 11         01234


Q ss_pred             Chh-HHHHHHHHHHHHhccC---CCCeEEEEEecEEEeCCCCcccchHHHH-HHHhCCCCCCCCcceecccHHHHHHHHH
Q 018503          192 NDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLF-MMFAGGPLGSGQQWFSWIHLDDIVNLIY  266 (355)
Q Consensus       192 ~~y-~~k~~~~~~~~~~~~~---~~~~~~i~Rp~~i~G~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~v~Dva~~~~  266 (355)
                      ..| .+|...+.+...+..+   .|+++++++||.+.++.......-.... ......+.      ..+...+|+|++++
T Consensus       170 ~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~------~~~~~p~dvA~~v~  243 (267)
T 1vl8_A          170 SAYAASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTEAVFSDPEKLDYMLKRIPL------GRTGVPEDLKGVAV  243 (267)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTHHHHTCHHHHHHHHHTCTT------SSCBCGGGGHHHHH
T ss_pred             hhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCccccccccccChHHHHHHHhhCCC------CCCcCHHHHHHHHH
Confidence            467 7777666655544432   4899999999999876432110000111 11122222      23789999999999


Q ss_pred             HHHhCCC---CCCceEecCCC
Q 018503          267 EALSNPS---YRGVINGTAPN  284 (355)
Q Consensus       267 ~~~~~~~---~~~~~~i~~~~  284 (355)
                      .++....   .+..+.+.+|.
T Consensus       244 ~l~s~~~~~itG~~i~vdGG~  264 (267)
T 1vl8_A          244 FLASEEAKYVTGQIIFVDGGW  264 (267)
T ss_dssp             HHHSGGGTTCCSCEEEESTTG
T ss_pred             HHcCccccCCcCCeEEECCCC
Confidence            9997542   34477777664

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2

Probab=99.82  E-value=1.4e-19  Score=156.45  Aligned_cols=219  Identities=14%  Similarity=0.071  Sum_probs=146.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCC------CCCccCCCeeecCCcchhhhcC-------
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG------KKTRFFPGVMIAEEPQWRDCIQ-------  115 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~------~~~~~~~~~d~~~~~~~~~~~~-------  115 (355)
                      ++++++||||+|+||++++++|+++|++|++++|+.+........      ........+|+.|.+++.++++       
T Consensus        12 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   91 (267)
T 1iy8_A           12 TDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERFG   91 (267)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            457899999999999999999999999999999987654322100      0001134578889888877664       


Q ss_pred             CCcEEEECCCCCCC----CCCChhhHHHHHHHhhhhHHHHHHHH----HcCCCCCCcEEEEeeeeeeeeCCCCCccccCC
Q 018503          116 GSTAVVNLAGTPIG----TRWSSEIKKEIKESRIRVTSKVVDLI----NESPEGVRPSVLVSATALGYYGTSETEVFDES  187 (355)
Q Consensus       116 ~~d~vi~~a~~~~~----~~~~~~~~~~~~~~n~~~~~~l~~a~----~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~  187 (355)
                      ++|++||+||....    .....+.+...+++|+.++..+++++    ++  .+.+++|++||...  +..         
T Consensus        92 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~--~~~g~iv~isS~~~--~~~---------  158 (267)
T 1iy8_A           92 RIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMRE--QGSGMVVNTASVGG--IRG---------  158 (267)
T ss_dssp             CCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHH--HTCCEEEEECCGGG--TSB---------
T ss_pred             CCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHH--cCCCEEEEEcchhh--ccC---------
Confidence            68999999997432    23356777889999999987666554    33  35679999999765  321         


Q ss_pred             CCCCChh-HHHHHHHHHHHHhcc---CCCCeEEEEEecEEEeCCCCcc-----cchHH-HH-HHHhCCCCCCCCcceecc
Q 018503          188 SPSGNDY-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGAL-----AKMIP-LF-MMFAGGPLGSGQQWFSWI  256 (355)
Q Consensus       188 ~~~~~~y-~~k~~~~~~~~~~~~---~~~~~~~i~Rp~~i~G~~~~~~-----~~~~~-~~-~~~~~~~~~~~~~~~~~i  256 (355)
                      .+....| .+|...+.+.+.+..   ..|++++.++||.++++.....     ..... .. ......+      ...+.
T Consensus       159 ~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~p------~~r~~  232 (267)
T 1iy8_A          159 IGNQSGYAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQVNP------SKRYG  232 (267)
T ss_dssp             CSSBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHHHHHHHCTTCHHHHHHHHHTTCT------TCSCB
T ss_pred             CCCCccHHHHHHHHHHHHHHHHHHHHhcCeEEEEEEeCCCcCcchhccccccChhhhhhHHHHHhccCC------CCCCc
Confidence            1233467 777766655554433   2489999999999987631110     00111 00 1111111      12478


Q ss_pred             cHHHHHHHHHHHHhCCC---CCCceEecCCCcc
Q 018503          257 HLDDIVNLIYEALSNPS---YRGVINGTAPNPV  286 (355)
Q Consensus       257 ~v~Dva~~~~~~~~~~~---~~~~~~i~~~~~~  286 (355)
                      +.+|+|++++.++..+.   .+..+++.+|...
T Consensus       233 ~~~dvA~~v~~l~s~~~~~~tG~~i~vdGG~~~  265 (267)
T 1iy8_A          233 EAPEIAAVVAFLLSDDASYVNATVVPIDGGQSA  265 (267)
T ss_dssp             CHHHHHHHHHHHTSGGGTTCCSCEEEESTTTTT
T ss_pred             CHHHHHHHHHHHcCccccCCCCCEEEECCCccc
Confidence            99999999999997542   3557888877543

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}

Probab=99.82  E-value=7.8e-20  Score=156.15  Aligned_cols=217  Identities=16%  Similarity=0.107  Sum_probs=145.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEec-CCchhhccCC----CCCCccCCCeeecCCcchhhhcC-------C
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTR-SRSKAELIFP----GKKTRFFPGVMIAEEPQWRDCIQ-------G  116 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r-~~~~~~~~~~----~~~~~~~~~~d~~~~~~~~~~~~-------~  116 (355)
                      ++++|+||||+|+||++++++|+++|++|++++| +.+.......    .........+|+.|++++.++++       +
T Consensus         3 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   82 (246)
T 2uvd_A            3 KGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGSDAIAVRADVANAEDVTNMVKQTVDVFGQ   82 (246)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            3578999999999999999999999999999999 5443322110    01011134578889888877664       7


Q ss_pred             CcEEEECCCCCCC---CCCChhhHHHHHHHhhhhHHHHHHHHHcC--CCCCCcEEEEeeeeeeeeCCCCCccccCCCCCC
Q 018503          117 STAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSG  191 (355)
Q Consensus       117 ~d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~  191 (355)
                      +|++||+||....   .....+.+...+++|+.++..+++++...  +.+.+++|++||.... ++          .+..
T Consensus        83 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~-~~----------~~~~  151 (246)
T 2uvd_A           83 VDILVNNAGVTKDNLLMRMKEEEWDTVINTNLKGVFLCTKAVSRFMMRQRHGRIVNIASVVGV-TG----------NPGQ  151 (246)
T ss_dssp             CCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHH-HC----------CTTB
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCHHhc-CC----------CCCC
Confidence            9999999997532   23456777889999999977766655321  0356799999997651 22          1223


Q ss_pred             Chh-HHHHHHHHHHHHhcc---CCCCeEEEEEecEEEeCCCCccc-chHHHHHHHhCCCCCCCCcceecccHHHHHHHHH
Q 018503          192 NDY-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALA-KMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIY  266 (355)
Q Consensus       192 ~~y-~~k~~~~~~~~~~~~---~~~~~~~i~Rp~~i~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~  266 (355)
                      ..| .+|...+.+.+.+..   ..|+++++++||.+.++...... ....  ......+.      ..+++.+|+|++++
T Consensus       152 ~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~--~~~~~~p~------~~~~~~~dvA~~~~  223 (246)
T 2uvd_A          152 ANYVAAKAGVIGLTKTSAKELASRNITVNAIAPGFIATDMTDVLDENIKA--EMLKLIPA------AQFGEAQDIANAVT  223 (246)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBGGGCSSCCCTTHHH--HHHHTCTT------CSCBCHHHHHHHHH
T ss_pred             chHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeccccCcchhhcCHHHHH--HHHhcCCC------CCCcCHHHHHHHHH
Confidence            457 777655555443332   34899999999999876432211 1111  11122222      24789999999999


Q ss_pred             HHHhCCC---CCCceEecCCC
Q 018503          267 EALSNPS---YRGVINGTAPN  284 (355)
Q Consensus       267 ~~~~~~~---~~~~~~i~~~~  284 (355)
                      .++..+.   .+..+++.+|.
T Consensus       224 ~l~s~~~~~~tG~~~~vdgG~  244 (246)
T 2uvd_A          224 FFASDQSKYITGQTLNVDGGM  244 (246)
T ss_dssp             HHHSGGGTTCCSCEEEESTTS
T ss_pred             HHcCchhcCCCCCEEEECcCc
Confidence            9997542   34578887764

>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}

Probab=99.82  E-value=2.8e-20  Score=161.02  Aligned_cols=221  Identities=14%  Similarity=0.085  Sum_probs=152.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCC----CCCCccCCCeeecCCcchhhhcC-------CC
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP----GKKTRFFPGVMIAEEPQWRDCIQ-------GS  117 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~~d~~~~~~~~~~~~-------~~  117 (355)
                      .++++|||||+|+||++++++|+++|++|++++|+.+.......    .........+|+.|.+++.++++       ++
T Consensus        25 ~gk~~lVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i  104 (271)
T 4ibo_A           25 GGRTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNVGHDAEAVAFDVTSESEIIEAFARLDEQGIDV  104 (271)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHHTCCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHCCCC
Confidence            45799999999999999999999999999999998765433211    11111244579999988877764       78


Q ss_pred             cEEEECCCCCCC---CCCChhhHHHHHHHhhhhHHHHHHHHHcC--CCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCC
Q 018503          118 TAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGN  192 (355)
Q Consensus       118 d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~  192 (355)
                      |++||+||....   ...+.+.+...+++|+.++..+++++...  ..+..++|++||...  +..         .+...
T Consensus       105 D~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iV~isS~~~--~~~---------~~~~~  173 (271)
T 4ibo_A          105 DILVNNAGIQFRKPMIELETADWQRVIDTNLTSAFMIGREAAKRMIPRGYGKIVNIGSLTS--ELA---------RATVA  173 (271)
T ss_dssp             CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGG--TSB---------CTTCH
T ss_pred             CEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccHHh--CCC---------CCCch
Confidence            999999997533   23466778889999999999997766431  135578999999765  211         22345


Q ss_pred             hh-HHHHHHHHHHHHhccC---CCCeEEEEEecEEEeCCCCcccchHHHH-HHHhCCCCCCCCcceecccHHHHHHHHHH
Q 018503          193 DY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLF-MMFAGGPLGSGQQWFSWIHLDDIVNLIYE  267 (355)
Q Consensus       193 ~y-~~k~~~~~~~~~~~~~---~~~~~~i~Rp~~i~G~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~v~Dva~~~~~  267 (355)
                      .| .+|...+.+.+.+..+   .|+++..++||.+.++............ ......+.      ..+...+|+|++++.
T Consensus       174 ~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~------~r~~~pedva~~v~~  247 (271)
T 4ibo_A          174 PYTVAKGGIKMLTRAMAAEWAQYGIQANAIGPGYMLTDMNQALIDNPEFDAWVKARTPA------KRWGKPQELVGTAVF  247 (271)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHHCHHHHHHHHHHSTT------CSCBCGGGGHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeccEeCcchhhcccCHHHHHHHHhcCCC------CCCcCHHHHHHHHHH
Confidence            67 7787666665554433   5899999999999887432110000111 11122222      246789999999999


Q ss_pred             HHhCCC---CCCceEecCCCcc
Q 018503          268 ALSNPS---YRGVINGTAPNPV  286 (355)
Q Consensus       268 ~~~~~~---~~~~~~i~~~~~~  286 (355)
                      ++....   .+..+++.+|...
T Consensus       248 L~s~~~~~itG~~i~vdGG~~~  269 (271)
T 4ibo_A          248 LSASASDYVNGQIIYVDGGMLS  269 (271)
T ss_dssp             HHSGGGTTCCSCEEEESTTGGG
T ss_pred             HhCccccCCCCcEEEECCCeec
Confidence            987543   4558889887644

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}

Probab=99.82  E-value=9.7e-20  Score=154.39  Aligned_cols=193  Identities=19%  Similarity=0.175  Sum_probs=129.4

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcC-------CCcEEEE
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ-------GSTAVVN  122 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-------~~d~vi~  122 (355)
                      +++|+||||+|+||++++++|+++|++|++++|+.+................+|+.|.+++.++++       ++|+|||
T Consensus         5 ~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~   84 (234)
T 2ehd_A            5 KGAVLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAELEGALPLPGDVREEGDWARAVAAMEEAFGELSALVN   84 (234)
T ss_dssp             CCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhhceEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            468999999999999999999999999999999876543321110001134578888887776653       7899999


Q ss_pred             CCCCCCC---CCCChhhHHHHHHHhhhhHHHHHHH----HHcCCCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCChh-
Q 018503          123 LAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDL----INESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-  194 (355)
Q Consensus       123 ~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a----~~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~~y-  194 (355)
                      +||....   .....+.+...+++|+.++..++++    +++  .+.+++|++||...  +..         .+....| 
T Consensus        85 ~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~--~~~~~iv~isS~~~--~~~---------~~~~~~Y~  151 (234)
T 2ehd_A           85 NAGVGVMKPVHELTLEEWRLVLDTNLTGAFLGIRHAVPALLR--RGGGTIVNVGSLAG--KNP---------FKGGAAYN  151 (234)
T ss_dssp             CCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHT--TTCEEEEEECCTTT--TSC---------CTTCHHHH
T ss_pred             CCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh--CCCcEEEEECCchh--cCC---------CCCCchhh
Confidence            9997432   2335667788999999998766554    444  56789999999765  331         1234567 


Q ss_pred             HHHHHHHHHHHHhcc---CCCCeEEEEEecEEEeCCCCcccchHHHHHHHhCCCCCCCCcceecccHHHHHHHHHHHHhC
Q 018503          195 LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSN  271 (355)
Q Consensus       195 ~~k~~~~~~~~~~~~---~~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~  271 (355)
                      .+|...+.+.+.+..   ..|++++++|||.+..+.....    +      . .       +.++..+|+|++++.++..
T Consensus       152 ~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~----~------~-~-------~~~~~~~dvA~~~~~l~~~  213 (234)
T 2ehd_A          152 ASKFGLLGLAGAAMLDLREANVRVVNVLPGSVDTGFAGNT----P------G-Q-------AWKLKPEDVAQAVLFALEM  213 (234)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEECC----------------------------------CCHHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCccccc----c------c-c-------cCCCCHHHHHHHHHHHhCC
Confidence            777655555443332   3589999999999876532110    0      0 0       1157999999999999987


Q ss_pred             CC
Q 018503          272 PS  273 (355)
Q Consensus       272 ~~  273 (355)
                      +.
T Consensus       214 ~~  215 (234)
T 2ehd_A          214 PG  215 (234)
T ss_dssp             CC
T ss_pred             Cc
Confidence            64

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*

Probab=99.82  E-value=1.1e-19  Score=157.17  Aligned_cols=217  Identities=15%  Similarity=0.123  Sum_probs=150.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCch-hhccC----CCCCCccCCCeeecCCcchhhhcC-------C
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSK-AELIF----PGKKTRFFPGVMIAEEPQWRDCIQ-------G  116 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~-~~~~~----~~~~~~~~~~~d~~~~~~~~~~~~-------~  116 (355)
                      ++++++||||+|+||++++++|+++|++|++++|+... .....    ..........+|+.|.+++.++++       +
T Consensus        27 ~~k~vlVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~~g~  106 (269)
T 4dmm_A           27 TDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGEAFAVKADVSQESEVEALFAAVIERWGR  106 (269)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            45789999999999999999999999999999985432 22111    011111134578999888877664       7


Q ss_pred             CcEEEECCCCCCC---CCCChhhHHHHHHHhhhhHHHHHHHHHcC--CCCCCcEEEEeeeeeeeeCCCCCccccCCCCCC
Q 018503          117 STAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSG  191 (355)
Q Consensus       117 ~d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~  191 (355)
                      +|++||+||....   .....+.+...+++|+.++..+++++...  ..+..++|++||.... ++          .+..
T Consensus       107 id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~-~~----------~~~~  175 (269)
T 4dmm_A          107 LDVLVNNAGITRDTLLLRMKRDDWQSVLDLNLGGVFLCSRAAAKIMLKQRSGRIINIASVVGE-MG----------NPGQ  175 (269)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCHHHH-HC----------CTTC
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhc-CC----------CCCc
Confidence            8999999997533   23456778899999999999998876321  0356789999997652 22          1234


Q ss_pred             Chh-HHHHHHHHHHHHhcc---CCCCeEEEEEecEEEeCCCCcccchHHHHHHHhCCCCCCCCcceecccHHHHHHHHHH
Q 018503          192 NDY-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYE  267 (355)
Q Consensus       192 ~~y-~~k~~~~~~~~~~~~---~~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~  267 (355)
                      ..| .+|...+.+.+.+..   ..|+++..++||.+.++.....   .. .......++      ..+.+.+|+|++++.
T Consensus       176 ~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~---~~-~~~~~~~p~------~r~~~~~dvA~~v~~  245 (269)
T 4dmm_A          176 ANYSAAKAGVIGLTKTVAKELASRGITVNAVAPGFIATDMTSEL---AA-EKLLEVIPL------GRYGEAAEVAGVVRF  245 (269)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBTTSCSCHH---HH-HHHGGGCTT------SSCBCHHHHHHHHHH
T ss_pred             hhHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEECCCcCcccccc---cH-HHHHhcCCC------CCCCCHHHHHHHHHH
Confidence            567 778766655554443   2489999999999988753321   11 111222222      347889999999999


Q ss_pred             HHhCCC----CCCceEecCCCcc
Q 018503          268 ALSNPS----YRGVINGTAPNPV  286 (355)
Q Consensus       268 ~~~~~~----~~~~~~i~~~~~~  286 (355)
                      ++..+.    .+..+++.+|..+
T Consensus       246 l~s~~~~~~itG~~i~vdGG~~~  268 (269)
T 4dmm_A          246 LAADPAAAYITGQVINIDGGLVM  268 (269)
T ss_dssp             HHHCGGGGGCCSCEEEESTTSCC
T ss_pred             HhCCcccCCCcCCEEEECCCeec
Confidence            998732    3558999888654

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}

Probab=99.82  E-value=1.1e-19  Score=157.82  Aligned_cols=222  Identities=13%  Similarity=0.053  Sum_probs=152.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCC-CCCccCCCeeecCCcchhhhcC-------CCcEE
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-KKTRFFPGVMIAEEPQWRDCIQ-------GSTAV  120 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~-------~~d~v  120 (355)
                      ++++++||||+|+||++++++|+++|++|++++|+.+........ ........+|+.|.+++.++++       ++|++
T Consensus        26 ~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l  105 (277)
T 4dqx_A           26 NQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEIGSKAFGVRVDVSSAKDAESMVEKTTAKWGRVDVL  105 (277)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            357899999999999999999999999999999987654432211 0011134579999888877664       78999


Q ss_pred             EECCCCCCC---CCCChhhHHHHHHHhhhhHHHHHHHHHcC--CCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCChh-
Q 018503          121 VNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-  194 (355)
Q Consensus       121 i~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~~y-  194 (355)
                      ||+||....   ...+.+.+...+++|+.++..+++++...  +.+..++|++||...  +..         .+....| 
T Consensus       106 v~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~--~~~---------~~~~~~Y~  174 (277)
T 4dqx_A          106 VNNAGFGTTGNVVTIPEETWDRIMSVNVKGIFLCSKYVIPVMRRNGGGSIINTTSYTA--TSA---------IADRTAYV  174 (277)
T ss_dssp             EECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECCGGG--TSC---------CTTBHHHH
T ss_pred             EECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECchhh--CcC---------CCCChhHH
Confidence            999997533   23456778889999999999888877431  145679999999876  321         1234567 


Q ss_pred             HHHHHHHHHHHHhccC---CCCeEEEEEecEEEeCCC-Ccc---cchHHHH-HHHhCCCCCCCCcceecccHHHHHHHHH
Q 018503          195 LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDG-GAL---AKMIPLF-MMFAGGPLGSGQQWFSWIHLDDIVNLIY  266 (355)
Q Consensus       195 ~~k~~~~~~~~~~~~~---~~~~~~i~Rp~~i~G~~~-~~~---~~~~~~~-~~~~~~~~~~~~~~~~~i~v~Dva~~~~  266 (355)
                      .+|...+.+.+.+..+   .|+++..++||.+..+.. ...   ....... ......+      ...+.+.+|+|++++
T Consensus       175 asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~------~~r~~~pedvA~~v~  248 (277)
T 4dqx_A          175 ASKGAISSLTRAMAMDHAKEGIRVNAVAPGTIDSPYFTKIFAEAKDPAKLRSDFNARAV------MDRMGTAEEIAEAML  248 (277)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHHTCSCHHHHHHHHHTTST------TCSCBCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCchhhhhcccccchhHHHHHHHhcCc------ccCCcCHHHHHHHHH
Confidence            7787766665554433   489999999999977531 000   0011111 1112222      234789999999999


Q ss_pred             HHHhCCC---CCCceEecCCCccC
Q 018503          267 EALSNPS---YRGVINGTAPNPVR  287 (355)
Q Consensus       267 ~~~~~~~---~~~~~~i~~~~~~s  287 (355)
                      .++....   .+..+++.+|..++
T Consensus       249 ~L~s~~~~~itG~~i~vdGG~~~~  272 (277)
T 4dqx_A          249 FLASDRSRFATGSILTVDGGSSIG  272 (277)
T ss_dssp             HHHSGGGTTCCSCEEEESSSSSSC
T ss_pred             HHhCCccCCCcCCEEEECCchhhh
Confidence            9997543   45588998886544

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0

Probab=99.82  E-value=2.3e-19  Score=156.27  Aligned_cols=224  Identities=14%  Similarity=0.064  Sum_probs=149.0

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCC-------------chhhcc----CCCCCCccCCCeeecCCcch
Q 018503           48 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSR-------------SKAELI----FPGKKTRFFPGVMIAEEPQW  110 (355)
Q Consensus        48 ~~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~-------------~~~~~~----~~~~~~~~~~~~d~~~~~~~  110 (355)
                      ...++++||||+|+||++++++|+++|++|++++|+.             +.....    ...........+|+.|++++
T Consensus        13 l~gk~~lVTGas~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v   92 (280)
T 3pgx_A           13 LQGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDVRDDAAL   92 (280)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHH
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHH
Confidence            3457899999999999999999999999999999842             111111    11111111334688898888


Q ss_pred             hhhcC-------CCcEEEECCCCCCC---CCCChhhHHHHHHHhhhhHHHHHHHHHcC--C-CCCCcEEEEeeeeeeeeC
Q 018503          111 RDCIQ-------GSTAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--P-EGVRPSVLVSATALGYYG  177 (355)
Q Consensus       111 ~~~~~-------~~d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~-~~~~~~v~~Ss~~~~~yg  177 (355)
                      .++++       ++|++||+||....   ...+.+.+...+++|+.++.++++++...  . ....++|++||...  +.
T Consensus        93 ~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~--~~  170 (280)
T 3pgx_A           93 RELVADGMEQFGRLDVVVANAGVLSWGRVWELTDEQWDTVIGVNLTGTWRTLRATVPAMIEAGNGGSIVVVSSSAG--LK  170 (280)
T ss_dssp             HHHHHHHHHHHCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGG--TS
T ss_pred             HHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEEcchhh--cc
Confidence            77664       78999999997533   23456777889999999999998887331  0 22568999999876  32


Q ss_pred             CCCCccccCCCCCCChh-HHHHHHHHHHHHhccC---CCCeEEEEEecEEEeCCCCcccchHHHHHH----HhCCCCCCC
Q 018503          178 TSETEVFDESSPSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMM----FAGGPLGSG  249 (355)
Q Consensus       178 ~~~~~~~~e~~~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~----~~~~~~~~~  249 (355)
                      .         .+....| .+|...+.+.+.+..+   .|+++..++||.+.++..... .....+..    ........ 
T Consensus       171 ~---------~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~-~~~~~~~~~~~~~~~~~~~~-  239 (280)
T 3pgx_A          171 A---------TPGNGHYSASKHGLTALTNTLAIELGEYGIRVNSIHPYSVETPMIEPE-AMMEIFARHPSFVHSFPPMP-  239 (280)
T ss_dssp             C---------CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCHH-HHHHHHHHCGGGGGGSCCBT-
T ss_pred             C---------CCCchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccCcccchh-hhhhhhhcCchhhhhhhhcc-
Confidence            1         1224567 7787766665555443   589999999999998864321 11111110    01111111 


Q ss_pred             CcceecccHHHHHHHHHHHHhCCC---CCCceEecCCC
Q 018503          250 QQWFSWIHLDDIVNLIYEALSNPS---YRGVINGTAPN  284 (355)
Q Consensus       250 ~~~~~~i~v~Dva~~~~~~~~~~~---~~~~~~i~~~~  284 (355)
                      .....+.+.+|+|++++.++....   .+..+++.+|.
T Consensus       240 ~~~~r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~  277 (280)
T 3pgx_A          240 VQPNGFMTADEVADVVAWLAGDGSGTLTGTQIPVDKGA  277 (280)
T ss_dssp             TBCSSCBCHHHHHHHHHHHHSGGGTTCSSCEEEESTTG
T ss_pred             cCCCCCCCHHHHHHHHHHHhCccccCCCCCEEEECCCc
Confidence            111248999999999999997543   35588887764

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*

Probab=99.82  E-value=1.5e-20  Score=163.46  Aligned_cols=223  Identities=14%  Similarity=0.071  Sum_probs=151.5

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCC-----CCCccCCCeeecCCcchhhhcC-------
Q 018503           48 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-----KKTRFFPGVMIAEEPQWRDCIQ-------  115 (355)
Q Consensus        48 ~~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-----~~~~~~~~~d~~~~~~~~~~~~-------  115 (355)
                      ..+++++||||+|+||++++++|+++|++|++++|+.+........     ........+|+.|.+++.++++       
T Consensus        25 l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g  104 (277)
T 4fc7_A           25 LRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVRAPPAVMAAVDQALKEFG  104 (277)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             cCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            3457999999999999999999999999999999987653322110     0001134578999888776664       


Q ss_pred             CCcEEEECCCCCCC---CCCChhhHHHHHHHhhhhHHHHHHHHHcC--CCCCCcEEEEeeeeeeeeCCCCCccccCCCCC
Q 018503          116 GSTAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPS  190 (355)
Q Consensus       116 ~~d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~  190 (355)
                      ++|++||+||....   ...+.+.+...+++|+.++.++++++...  ..+..++|++||...  +..         .+.
T Consensus       105 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~--~~~---------~~~  173 (277)
T 4fc7_A          105 RIDILINCAAGNFLCPAGALSFNAFKTVMDIDTSGTFNVSRVLYEKFFRDHGGVIVNITATLG--NRG---------QAL  173 (277)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCSHH--HHT---------CTT
T ss_pred             CCCEEEECCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhh--CCC---------CCC
Confidence            78999999996432   23466778899999999999999887421  024568999999866  321         123


Q ss_pred             CChh-HHHHHHHHHHHHhccC---CCCeEEEEEecEEEeCCCC-cccchHHHH-HHHhCCCCCCCCcceecccHHHHHHH
Q 018503          191 GNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGG-ALAKMIPLF-MMFAGGPLGSGQQWFSWIHLDDIVNL  264 (355)
Q Consensus       191 ~~~y-~~k~~~~~~~~~~~~~---~~~~~~i~Rp~~i~G~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~i~v~Dva~~  264 (355)
                      ...| .+|...+.+.+.+..+   .|+++..++||.+.++... ......... ......++      ..+...+|+|++
T Consensus       174 ~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~p~------~r~~~p~dvA~~  247 (277)
T 4fc7_A          174 QVHAGSAKAAVDAMTRHLAVEWGPQNIRVNSLAPGPISGTEGLRRLGGPQASLSTKVTASPL------QRLGNKTEIAHS  247 (277)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSSSHHHHHHSCCHHHHHHHHHTSTT------SSCBCHHHHHHH
T ss_pred             cHHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEECCEecchhhhhccCCHHHHHHHhccCCC------CCCcCHHHHHHH
Confidence            3467 7777666655544433   4899999999999876310 000001111 22222222      247889999999


Q ss_pred             HHHHHhCCC---CCCceEecCCCccC
Q 018503          265 IYEALSNPS---YRGVINGTAPNPVR  287 (355)
Q Consensus       265 ~~~~~~~~~---~~~~~~i~~~~~~s  287 (355)
                      ++.++....   .+..+++.+|..++
T Consensus       248 v~fL~s~~~~~itG~~i~vdGG~~~~  273 (277)
T 4fc7_A          248 VLYLASPLASYVTGAVLVADGGAWLT  273 (277)
T ss_dssp             HHHHHSGGGTTCCSCEEEESTTHHHH
T ss_pred             HHHHcCCccCCcCCCEEEECCCcccC
Confidence            999998543   45588888876443

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}

Probab=99.82  E-value=1.4e-19  Score=157.32  Aligned_cols=224  Identities=14%  Similarity=0.020  Sum_probs=155.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccC----CCCCCccCCCeeecCCcchhhhcC-------CC
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIF----PGKKTRFFPGVMIAEEPQWRDCIQ-------GS  117 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~~~~~~~~~~~d~~~~~~~~~~~~-------~~  117 (355)
                      .++++|||||+|+||++++++|+++|++|++++|+.+......    ..........+|+.|++++.++++       ++
T Consensus         7 ~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   86 (280)
T 3tox_A            7 EGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGGGEAAALAGDVGDEALHEALVELAVRRFGGL   86 (280)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHTTTTCCEEECCCCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            3578999999999999999999999999999999876543321    111111244579999888877664       78


Q ss_pred             cEEEECCCCCCC----CCCChhhHHHHHHHhhhhHHHHHHHHHcC--CCCCCcEEEEeeeeeeeeCCCCCccccCCCCCC
Q 018503          118 TAVVNLAGTPIG----TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSG  191 (355)
Q Consensus       118 d~vi~~a~~~~~----~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~  191 (355)
                      |++||+||....    ...+.+.+...+++|+.++..+++++...  ..+..++|++||...  +..        ..+..
T Consensus        87 D~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~--~~~--------~~~~~  156 (280)
T 3tox_A           87 DTAFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFLAAKYQVPAIAALGGGSLTFTSSFVG--HTA--------GFAGV  156 (280)
T ss_dssp             CEEEECCCCCCSCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCSBT--TTB--------CCTTC
T ss_pred             CEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcChhh--CcC--------CCCCc
Confidence            999999996421    24466778899999999999998876431  135568999999765  310        12234


Q ss_pred             Chh-HHHHHHHHHHHHhccC---CCCeEEEEEecEEEeCCCCc-ccc-hHHHHH-HHhCCCCCCCCcceecccHHHHHHH
Q 018503          192 NDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGA-LAK-MIPLFM-MFAGGPLGSGQQWFSWIHLDDIVNL  264 (355)
Q Consensus       192 ~~y-~~k~~~~~~~~~~~~~---~~~~~~i~Rp~~i~G~~~~~-~~~-~~~~~~-~~~~~~~~~~~~~~~~i~v~Dva~~  264 (355)
                      ..| .+|...+.+.+.+..+   .|+++..++||.+.++.... ... ...... .....+      ...+...+|+|++
T Consensus       157 ~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~p------~~r~~~pedvA~~  230 (280)
T 3tox_A          157 APYAASKAGLIGLVQALAVELGARGIRVNALLPGGTDTPANFANLPGAAPETRGFVEGLHA------LKRIARPEEIAEA  230 (280)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBSSTTSGGGSTTCCTHHHHHHHTTST------TSSCBCHHHHHHH
T ss_pred             hhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEECCCCCchhhhhccccCHHHHHHHhccCc------cCCCcCHHHHHHH
Confidence            568 7887766666555443   48999999999999875322 100 011111 112222      2347899999999


Q ss_pred             HHHHHhCCC---CCCceEecCCCccCH
Q 018503          265 IYEALSNPS---YRGVINGTAPNPVRL  288 (355)
Q Consensus       265 ~~~~~~~~~---~~~~~~i~~~~~~s~  288 (355)
                      ++.++....   .+..+++.+|..++.
T Consensus       231 v~~L~s~~a~~itG~~i~vdGG~~~~~  257 (280)
T 3tox_A          231 ALYLASDGASFVTGAALLADGGASVTK  257 (280)
T ss_dssp             HHHHHSGGGTTCCSCEEEESTTGGGCC
T ss_pred             HHHHhCccccCCcCcEEEECCCccccc
Confidence            999998643   455899998876554

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}

Probab=99.82  E-value=5.4e-20  Score=159.68  Aligned_cols=225  Identities=13%  Similarity=0.005  Sum_probs=150.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCC-CCCccCCCeeecCCcchhhhcC-------CCcEE
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-KKTRFFPGVMIAEEPQWRDCIQ-------GSTAV  120 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~-------~~d~v  120 (355)
                      ++++++||||+|+||++++++|+++|++|++++|+.+........ ........+|+.|++++.++++       ++|++
T Consensus        28 ~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l  107 (277)
T 3gvc_A           28 AGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKIGCGAAACRVDVSDEQQIIAMVDACVAAFGGVDKL  107 (277)
T ss_dssp             TTCEEEETTTTSTHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHCSSCEEEECCTTCHHHHHHHHHHHHHHHSSCCEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCcceEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            457899999999999999999999999999999987654432111 0001134579999888776664       78999


Q ss_pred             EECCCCCCC---CCCChhhHHHHHHHhhhhHHHHHHHHHcC--CCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCChh-
Q 018503          121 VNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-  194 (355)
Q Consensus       121 i~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~~y-  194 (355)
                      ||+||....   ...+.+.+...+++|+.++..+++++...  ..+..++|++||...  +..         .+....| 
T Consensus       108 vnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~--~~~---------~~~~~~Y~  176 (277)
T 3gvc_A          108 VANAGVVHLASLIDTTVEDFDRVIAINLRGAWLCTKHAAPRMIERGGGAIVNLSSLAG--QVA---------VGGTGAYG  176 (277)
T ss_dssp             EECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGG--TSC---------CTTBHHHH
T ss_pred             EECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhh--ccC---------CCCchhHH
Confidence            999997533   24456778899999999998888876431  135678999999765  221         2234567 


Q ss_pred             HHHHHHHHHHHHhcc---CCCCeEEEEEecEEEeCCCCcccchHHHHHHHhCCCCCC---CCcceecccHHHHHHHHHHH
Q 018503          195 LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGS---GQQWFSWIHLDDIVNLIYEA  268 (355)
Q Consensus       195 ~~k~~~~~~~~~~~~---~~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~i~v~Dva~~~~~~  268 (355)
                      .+|...+.+.+.+..   ..|+++..++||.++++...........  . .......   ......+...+|+|++++.+
T Consensus       177 asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~r~~~pedvA~~v~~L  253 (277)
T 3gvc_A          177 MSKAGIIQLSRITAAELRSSGIRSNTLLPAFVDTPMQQTAMAMFDG--A-LGAGGARSMIARLQGRMAAPEEMAGIVVFL  253 (277)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHTCC---------CCHHHHHHHHHSSCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhcccCeEEEEEeeCCccCchHHHhhhcchh--h-HHHHhhhhhhhccccCCCCHHHHHHHHHHH
Confidence            778766666554433   2589999999999987631100000000  0 0000000   00113478999999999999


Q ss_pred             HhCCC---CCCceEecCCCccC
Q 018503          269 LSNPS---YRGVINGTAPNPVR  287 (355)
Q Consensus       269 ~~~~~---~~~~~~i~~~~~~s  287 (355)
                      +....   .+..+++.+|...+
T Consensus       254 ~s~~a~~itG~~i~vdGG~~~~  275 (277)
T 3gvc_A          254 LSDDASMITGTTQIADGGTIAA  275 (277)
T ss_dssp             HSGGGTTCCSCEEEESTTGGGS
T ss_pred             cCCccCCccCcEEEECCcchhc
Confidence            97543   45588888876543

>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A

Probab=99.82  E-value=8e-20  Score=158.35  Aligned_cols=218  Identities=13%  Similarity=0.066  Sum_probs=146.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhh-ccC----CCCCCccCCCeeecCCcchhhhcC-------C
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAE-LIF----PGKKTRFFPGVMIAEEPQWRDCIQ-------G  116 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~~~----~~~~~~~~~~~d~~~~~~~~~~~~-------~  116 (355)
                      ++++|+||||+|+||++++++|+++|++|++++|+..... ...    ..........+|+.|.+++.++++       +
T Consensus        28 ~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~  107 (271)
T 4iin_A           28 TGKNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEKGYKAAVIKFDAASESDFIEAIQTIVQSDGG  107 (271)
T ss_dssp             SCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence            4578999999999999999999999999999999654321 111    001011134578888887776664       7


Q ss_pred             CcEEEECCCCCCCC---CCChhhHHHHHHHhhhhHHHHHHHHHcC--CCCCCcEEEEeeeeeeeeCCCCCccccCCCCCC
Q 018503          117 STAVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSG  191 (355)
Q Consensus       117 ~d~vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~  191 (355)
                      +|++||+||.....   ....+.+...+++|+.++.++++++...  ..+..++|++||...  +..         .+..
T Consensus       108 id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~--~~~---------~~~~  176 (271)
T 4iin_A          108 LSYLVNNAGVVRDKLAIKMKTEDFHHVIDNNLTSAFIGCREALKVMSKSRFGSVVNVASIIG--ERG---------NMGQ  176 (271)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHH--HHC---------CTTC
T ss_pred             CCEEEECCCcCCCcccccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEechhh--cCC---------CCCc
Confidence            89999999975332   3456777889999999998887776331  135578999999765  221         2234


Q ss_pred             Chh-HHHHHHHHHHHHhccC---CCCeEEEEEecEEEeCCCCcccchHHHHHHHhCCCCCCCCcceecccHHHHHHHHHH
Q 018503          192 NDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYE  267 (355)
Q Consensus       192 ~~y-~~k~~~~~~~~~~~~~---~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~  267 (355)
                      ..| .+|...+.+.+.+..+   .++++..++||.+..+.....   .....    ..+........+.+.+|+|++++.
T Consensus       177 ~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~---~~~~~----~~~~~~~~~~~~~~p~dvA~~i~~  249 (271)
T 4iin_A          177 TNYSASKGGMIAMSKSFAYEGALRNIRFNSVTPGFIETDMNANL---KDELK----ADYVKNIPLNRLGSAKEVAEAVAF  249 (271)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCCC-------------------CGGGCTTCSCBCHHHHHHHHHH
T ss_pred             hHhHHHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcccCCchhhh---cHHHH----HHHHhcCCcCCCcCHHHHHHHHHH
Confidence            567 7787777666555443   589999999999987643221   11000    001111222357899999999999


Q ss_pred             HHhCCC---CCCceEecCCC
Q 018503          268 ALSNPS---YRGVINGTAPN  284 (355)
Q Consensus       268 ~~~~~~---~~~~~~i~~~~  284 (355)
                      ++..+.   .+..+++.+|.
T Consensus       250 l~s~~~~~itG~~i~vdGG~  269 (271)
T 4iin_A          250 LLSDHSSYITGETLKVNGGL  269 (271)
T ss_dssp             HHSGGGTTCCSCEEEESTTS
T ss_pred             HhCCCcCCCcCCEEEeCCCe
Confidence            997543   45588888774

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}

Probab=99.82  E-value=7.5e-20  Score=159.09  Aligned_cols=220  Identities=12%  Similarity=0.049  Sum_probs=149.3

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccC----CCCCCccCCCeeecCCcchhhhcC-------C
Q 018503           48 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIF----PGKKTRFFPGVMIAEEPQWRDCIQ-------G  116 (355)
Q Consensus        48 ~~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~~~~~~~~~~~d~~~~~~~~~~~~-------~  116 (355)
                      ++++++|||||+|+||++++++|+++|++|++++|+.+......    ..........+|+.|.+++.++++       .
T Consensus        22 ~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  101 (279)
T 3sju_A           22 SRPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGHDVDGSSCDVTSTDEVHAAVAAAVERFGP  101 (279)
T ss_dssp             ---CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHCS
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            34578999999999999999999999999999999876543321    111111134578889888776664       6


Q ss_pred             CcEEEECCCCCCC---CCCChhhHHHHHHHhhhhHHHHHHHHHc---C-CCCCCcEEEEeeeeeeeeCCCCCccccCCCC
Q 018503          117 STAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINE---S-PEGVRPSVLVSATALGYYGTSETEVFDESSP  189 (355)
Q Consensus       117 ~d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~~~---~-~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~  189 (355)
                      +|++||+||....   .....+.+...+++|+.++..+++++..   + ..+..++|++||...  +..         .+
T Consensus       102 id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~g~iV~isS~~~--~~~---------~~  170 (279)
T 3sju_A          102 IGILVNSAGRNGGGETADLDDALWADVLDTNLTGVFRVTREVLRAGGMREAGWGRIVNIASTGG--KQG---------VM  170 (279)
T ss_dssp             CCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSSHHHHTCEEEEEECCGGG--TSC---------CT
T ss_pred             CcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhchhhHhhcCCcEEEEECChhh--ccC---------CC
Confidence            8999999997532   2345677788999999999999987643   1 135578999999876  321         22


Q ss_pred             CCChh-HHHHHHHHHHHHhccC---CCCeEEEEEecEEEeCCCCccc---------chHHHH-HHHhCCCCCCCCcceec
Q 018503          190 SGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALA---------KMIPLF-MMFAGGPLGSGQQWFSW  255 (355)
Q Consensus       190 ~~~~y-~~k~~~~~~~~~~~~~---~~~~~~i~Rp~~i~G~~~~~~~---------~~~~~~-~~~~~~~~~~~~~~~~~  255 (355)
                      ....| .+|...+.+.+.+..+   .|+++..++||.+.++......         ..-... ......+      ...+
T Consensus       171 ~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p------~~r~  244 (279)
T 3sju_A          171 YAAPYTASKHGVVGFTKSVGFELAKTGITVNAVCPGYVETPMAERVREGYARHWGVTEQEVHERFNAKIP------LGRY  244 (279)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEESSBCSHHHHHHHHSCCSSSCCCHHHHHHHHHTTCT------TSSC
T ss_pred             CChhHHHHHHHHHHHHHHHHHHHHhhCcEEEEEeeCcccchHHHHHHhhhhhcccCChHHHHHHHHhcCC------CCCC
Confidence            34567 7787666666555443   4899999999999775311100         000111 1112222      2347


Q ss_pred             ccHHHHHHHHHHHHhCCC---CCCceEecCCC
Q 018503          256 IHLDDIVNLIYEALSNPS---YRGVINGTAPN  284 (355)
Q Consensus       256 i~v~Dva~~~~~~~~~~~---~~~~~~i~~~~  284 (355)
                      ...+|+|++++.++....   .+..+++.+|.
T Consensus       245 ~~pedvA~~v~~L~s~~a~~itG~~i~vdGG~  276 (279)
T 3sju_A          245 STPEEVAGLVGYLVTDAAASITAQALNVCGGL  276 (279)
T ss_dssp             BCHHHHHHHHHHHTSSGGGGCCSCEEEESTTC
T ss_pred             CCHHHHHHHHHHHhCccccCcCCcEEEECCCc
Confidence            899999999999998654   45588888774

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2

Probab=99.82  E-value=5.6e-20  Score=158.85  Aligned_cols=225  Identities=14%  Similarity=0.065  Sum_probs=149.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCC-----CCCccCCCeeecCCcchhhhcC-------C
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-----KKTRFFPGVMIAEEPQWRDCIQ-------G  116 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-----~~~~~~~~~d~~~~~~~~~~~~-------~  116 (355)
                      +.++|+||||+|+||++++++|+++|++|++++|+..........     ........+|+.|.+++.++++       .
T Consensus        13 ~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   92 (265)
T 1h5q_A           13 VNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADLGP   92 (265)
T ss_dssp             TTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHSCS
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCcchhhHHHHHHHHHhcCCeeEEEEeeCCCHHHHHHHHHHHHHhcCC
Confidence            346899999999999999999999999999999976543211000     0001134578888887776654       4


Q ss_pred             CcEEEECCCCCCCC---CCChhhHHHHHHHhhhhHHHHHHHHHcC--C-CCCCcEEEEeeeeeeeeCCCCCccccCCCCC
Q 018503          117 STAVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--P-EGVRPSVLVSATALGYYGTSETEVFDESSPS  190 (355)
Q Consensus       117 ~d~vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~-~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~  190 (355)
                      +|+|||+||.....   ....+.+...+++|+.++.++++++...  . ...+++|++||...  +......  .....+
T Consensus        93 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~--~~~~~~~--~~~~~~  168 (265)
T 1h5q_A           93 ISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSS--QIINQSS--LNGSLT  168 (265)
T ss_dssp             EEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGG--TSCCEEE--TTEECS
T ss_pred             CCEEEECCCcCCCCchhhCCHHHHHHHHhhhhHhHHHHHHHHHHHHHhcCCCceEEEeCCchh--hcccccc--cccccc
Confidence            89999999975322   2356677888999999999999887541  0 12478999999765  3211110  011122


Q ss_pred             CChh-HHHHHHHHHHHHhccC---CCCeEEEEEecEEEeCCCCccc-chHHHHHHHhCCCCCCCCcceecccHHHHHHHH
Q 018503          191 GNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALA-KMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLI  265 (355)
Q Consensus       191 ~~~y-~~k~~~~~~~~~~~~~---~~~~~~i~Rp~~i~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~  265 (355)
                      ...| .+|...+.+...+..+   .|++++++||+.++++...... ....  ......++      ..+++.+|+|+++
T Consensus       169 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~--~~~~~~~~------~~~~~~~dva~~~  240 (265)
T 1h5q_A          169 QVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAHMDKKIRD--HQASNIPL------NRFAQPEEMTGQA  240 (265)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGSCHHHHH--HHHHTCTT------SSCBCGGGGHHHH
T ss_pred             ccccHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCccccccccccchhHHH--HHHhcCcc------cCCCCHHHHHHHH
Confidence            4567 7777766665554432   4899999999999987533211 1111  11122222      2478999999999


Q ss_pred             HHHHhCCC---CCCceEecCCCc
Q 018503          266 YEALSNPS---YRGVINGTAPNP  285 (355)
Q Consensus       266 ~~~~~~~~---~~~~~~i~~~~~  285 (355)
                      +.++..+.   .+..|++.+|..
T Consensus       241 ~~l~~~~~~~~~G~~~~v~gG~~  263 (265)
T 1h5q_A          241 ILLLSDHATYMTGGEYFIDGGQL  263 (265)
T ss_dssp             HHHHSGGGTTCCSCEEEECTTGG
T ss_pred             HhhccCchhcCcCcEEEecCCEe
Confidence            99997543   455888888753

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.82  E-value=3.4e-20  Score=162.63  Aligned_cols=237  Identities=16%  Similarity=0.099  Sum_probs=156.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCC----CCC---CccCCCeeecCCcchhhhcC------
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP----GKK---TRFFPGVMIAEEPQWRDCIQ------  115 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~~---~~~~~~~d~~~~~~~~~~~~------  115 (355)
                      ++++++||||+|+||+++++.|+++|++|++++|+.+.......    ...   ......+|+.|++++.++++      
T Consensus        25 ~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  104 (297)
T 1xhl_A           25 SGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAKF  104 (297)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCCCHHHHHHHHHHHHHhc
Confidence            35789999999999999999999999999999998765432210    000   01134578889888877664      


Q ss_pred             -CCcEEEECCCCCCC-----CCCChhhHHHHHHHhhhhHHHHHHHHHcC--CCCCCcEEEEeeeeeeeeCCCCCccccCC
Q 018503          116 -GSTAVVNLAGTPIG-----TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDES  187 (355)
Q Consensus       116 -~~d~vi~~a~~~~~-----~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~  187 (355)
                       ++|++||+||....     .....+.+...+++|+.++.++++++...  ..+ +++|++||...  +...        
T Consensus       105 g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-g~IV~isS~~~--~~~~--------  173 (297)
T 1xhl_A          105 GKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTK-GEIVNVSSIVA--GPQA--------  173 (297)
T ss_dssp             SCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEECCGGG--SSSC--------
T ss_pred             CCCCEEEECCCcCcCCCCccccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC-CEEEEEcCchh--ccCC--------
Confidence             78999999997432     13356777889999999999998877541  134 79999999866  3211        


Q ss_pred             CCCCChh-HHHHHHHHHHHHhcc---CCCCeEEEEEecEEEeCCCCcc--cch-H-HHHHHHhCCCCCCCCcceecccHH
Q 018503          188 SPSGNDY-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGAL--AKM-I-PLFMMFAGGPLGSGQQWFSWIHLD  259 (355)
Q Consensus       188 ~~~~~~y-~~k~~~~~~~~~~~~---~~~~~~~i~Rp~~i~G~~~~~~--~~~-~-~~~~~~~~~~~~~~~~~~~~i~v~  259 (355)
                      .+....| .+|...+.+.+.+..   ..|+++++++||.+.++.....  ... . ........  +........+...+
T Consensus       174 ~~~~~~Y~asKaa~~~l~~~la~el~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~--~~~~~p~~r~~~pe  251 (297)
T 1xhl_A          174 HSGYPYYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGS--RKECIPVGHCGKPE  251 (297)
T ss_dssp             CTTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHH--CTTTCTTSSCBCHH
T ss_pred             CCCcchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcCccccccccccccccchHHHHHH--HHhcCCCCCCcCHH
Confidence            1234567 777766665554442   3589999999999988642111  000 0 00000000  00001123478999


Q ss_pred             HHHHHHHHHHhCC---C-CCCceEecCCCccCHHHHHHHHHHH
Q 018503          260 DIVNLIYEALSNP---S-YRGVINGTAPNPVRLAEMCDHLGNV  298 (355)
Q Consensus       260 Dva~~~~~~~~~~---~-~~~~~~i~~~~~~s~~el~~~i~~~  298 (355)
                      |+|++++.++..+   . .+..+++.+|......+.+..+.+.
T Consensus       252 dvA~~v~~l~s~~~~~~itG~~i~vdGG~~~~~~~~~~~~~~~  294 (297)
T 1xhl_A          252 EIANIIVFLADRNLSSYIIGQSIVADGGSTLVMGMQTHDLMSV  294 (297)
T ss_dssp             HHHHHHHHHHCHHHHTTCCSCEEEESTTGGGCCGGGGSCHHHH
T ss_pred             HHHHHHHHHhCCcccCCccCcEEEECCCccccccccccchhhh
Confidence            9999999998754   2 4558888888766666654444443

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2

Probab=99.82  E-value=1.3e-19  Score=156.72  Aligned_cols=226  Identities=15%  Similarity=0.038  Sum_probs=151.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcC-------CCcEEE
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ-------GSTAVV  121 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-------~~d~vi  121 (355)
                      ++++|+||||+|+||++++++|+++|++|++++|+.+................+|+.|.+++.++++       ++|++|
T Consensus         8 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv   87 (270)
T 1yde_A            8 AGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELPGAVFILCDVTQEDDVKTLVSETIRRFGRLDCVV   87 (270)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCeEEEcCCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            4578999999999999999999999999999999876543321110001134578889888877664       789999


Q ss_pred             ECCCCCCC----CCCChhhHHHHHHHhhhhHHHHHHHHHcC-CCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCChh-H
Q 018503          122 NLAGTPIG----TRWSSEIKKEIKESRIRVTSKVVDLINES-PEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-L  195 (355)
Q Consensus       122 ~~a~~~~~----~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~~y-~  195 (355)
                      |+||....    .....+.+...+++|+.++.++++++... ....+++|++||.... ++.          +....| .
T Consensus        88 ~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~-~~~----------~~~~~Y~a  156 (270)
T 1yde_A           88 NNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQGNVINISSLVGA-IGQ----------AQAVPYVA  156 (270)
T ss_dssp             ECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCHHHH-HCC----------TTCHHHHH
T ss_pred             ECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCEEEEEcCcccc-CCC----------CCCcccHH
Confidence            99997421    22345667889999999999998887531 0124789999997541 331          223467 7


Q ss_pred             HHHHHHHHHHHhcc---CCCCeEEEEEecEEEeCCCCcc----cchHHHH-HHHhCCCCCCCCcceecccHHHHHHHHHH
Q 018503          196 AEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGAL----AKMIPLF-MMFAGGPLGSGQQWFSWIHLDDIVNLIYE  267 (355)
Q Consensus       196 ~k~~~~~~~~~~~~---~~~~~~~i~Rp~~i~G~~~~~~----~~~~~~~-~~~~~~~~~~~~~~~~~i~v~Dva~~~~~  267 (355)
                      +|...+.+.+.+..   ..|+++++++||.++++.....    ....... ......++      ..+...+|+|++++.
T Consensus       157 sKaa~~~~~~~la~e~~~~gi~vn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~p~------~r~~~p~dva~~v~~  230 (270)
T 1yde_A          157 TKGAVTAMTKALALDESPYGVRVNCISPGNIWTPLWEELAALMPDPRASIREGMLAQPL------GRMGQPAEVGAAAVF  230 (270)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHHHTTSSSHHHHHHHHHHTSTT------SSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhhhCcEEEEEEeCccccchhhhhhhcccchHHHHHHHhhcCCC------CCCcCHHHHHHHHHH
Confidence            77766665555443   3589999999999998632110    0011111 11112222      236789999999999


Q ss_pred             HHhCCC--CCCceEecCCCccCHHHH
Q 018503          268 ALSNPS--YRGVINGTAPNPVRLAEM  291 (355)
Q Consensus       268 ~~~~~~--~~~~~~i~~~~~~s~~el  291 (355)
                      ++....  .+..+++.+|..+...+.
T Consensus       231 L~s~~~~itG~~i~vdGG~~~~~~~~  256 (270)
T 1yde_A          231 LASEANFCTGIELLVTGGAELGYGCK  256 (270)
T ss_dssp             HHHHCTTCCSCEEEESTTTTSCC---
T ss_pred             HcccCCCcCCCEEEECCCeecccCcC
Confidence            987532  345888988876654443

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A

Probab=99.82  E-value=9.9e-20  Score=155.54  Aligned_cols=211  Identities=16%  Similarity=0.127  Sum_probs=144.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcC-------CCcEEE
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ-------GSTAVV  121 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-------~~d~vi  121 (355)
                      ++++|+||||+|+||++++++|+++|++|++++|+.+......       ...+|+.|++++.++++       ++|++|
T Consensus        14 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-------~~~~D~~~~~~~~~~~~~~~~~~g~id~lv   86 (247)
T 1uzm_A           14 VSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKGLF-------GVEVDVTDSDAVDRAFTAVEEHQGPVEVLV   86 (247)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCTTSE-------EEECCTTCHHHHHHHHHHHHHHHSSCSEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHhc-------CeeccCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            4578999999999999999999999999999999875433221       13468888888776664       689999


Q ss_pred             ECCCCCCC---CCCChhhHHHHHHHhhhhHHHHHHHHHcC--CCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCChh-H
Q 018503          122 NLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-L  195 (355)
Q Consensus       122 ~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~~y-~  195 (355)
                      |+||....   .....+.+...+++|+.++.++++++...  ..+.+++|++||.... ++          .+....| .
T Consensus        87 ~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~-~~----------~~~~~~Y~~  155 (247)
T 1uzm_A           87 SNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGL-WG----------IGNQANYAA  155 (247)
T ss_dssp             EECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC----------------CCHHHHH
T ss_pred             ECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEECCHhhc-cC----------CCCChhHHH
Confidence            99997532   23456778899999999999998876431  1356799999997652 22          1234467 7


Q ss_pred             HHHHHHHHHHHhcc---CCCCeEEEEEecEEEeCCCCcccchHHHHH-HHhCCCCCCCCcceecccHHHHHHHHHHHHhC
Q 018503          196 AEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALAKMIPLFM-MFAGGPLGSGQQWFSWIHLDDIVNLIYEALSN  271 (355)
Q Consensus       196 ~k~~~~~~~~~~~~---~~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~  271 (355)
                      +|...+.+.+.+..   ..|+++++++||.+.++.......  .... .....+      ...+.+.+|+|++++.++..
T Consensus       156 sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~--~~~~~~~~~~p------~~~~~~~~dvA~~~~~l~s~  227 (247)
T 1uzm_A          156 SKAGVIGMARSIARELSKANVTANVVAPGYIDTDMTRALDE--RIQQGALQFIP------AKRVGTPAEVAGVVSFLASE  227 (247)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHSCH--HHHHHHGGGCT------TCSCBCHHHHHHHHHHHHSG
T ss_pred             HHHHHHHHHHHHHHHhhhcCcEEEEEEeCCCcccchhhcCH--HHHHHHHhcCC------CCCCcCHHHHHHHHHHHcCc
Confidence            77766555544433   248999999999997653111100  0011 111111      12478999999999999975


Q ss_pred             CC---CCCceEecCCCc
Q 018503          272 PS---YRGVINGTAPNP  285 (355)
Q Consensus       272 ~~---~~~~~~i~~~~~  285 (355)
                      +.   .+..+++.+|..
T Consensus       228 ~~~~~~G~~i~vdgG~~  244 (247)
T 1uzm_A          228 DASYISGAVIPVDGGMG  244 (247)
T ss_dssp             GGTTCCSCEEEESTTTT
T ss_pred             cccCCcCCEEEECCCcc
Confidence            32   355888887753

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}

Probab=99.82  E-value=1.8e-20  Score=166.46  Aligned_cols=231  Identities=19%  Similarity=0.101  Sum_probs=158.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecC----------CchhhccC----CCCCCccCCCeeecCCcchhhhc
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRS----------RSKAELIF----PGKKTRFFPGVMIAEEPQWRDCI  114 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~----------~~~~~~~~----~~~~~~~~~~~d~~~~~~~~~~~  114 (355)
                      .++++|||||+|+||+++++.|+++|++|++++|+          .+......    ..........+|+.|.+++.+++
T Consensus        26 ~gk~vlVTGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~  105 (322)
T 3qlj_A           26 DGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGSNVADWDQAAGLI  105 (322)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEECCCTTSHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHH
Confidence            45789999999999999999999999999999987          22221111    11111113457888988887766


Q ss_pred             C-------CCcEEEECCCCCCC---CCCChhhHHHHHHHhhhhHHHHHHHHHcC-C-------CCCCcEEEEeeeeeeee
Q 018503          115 Q-------GSTAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES-P-------EGVRPSVLVSATALGYY  176 (355)
Q Consensus       115 ~-------~~d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~-------~~~~~~v~~Ss~~~~~y  176 (355)
                      +       ++|++||+||....   ...+.+.+...+++|+.++..+++++... .       ....++|++||...  +
T Consensus       106 ~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~~~~~g~IV~isS~~~--~  183 (322)
T 3qlj_A          106 QTAVETFGGLDVLVNNAGIVRDRMIANTSEEEFDAVIAVHLKGHFATMRHAAAYWRGLSKAGKAVDGRIINTSSGAG--L  183 (322)
T ss_dssp             HHHHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCEEEEEECCHHH--H
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHccccCCCCCcEEEEEcCHHH--c
Confidence            4       78999999997533   23456778899999999999998877431 0       01258999999766  3


Q ss_pred             CCCCCccccCCCCCCChh-HHHHHHHHHHHHhccC---CCCeEEEEEecEEEeCCCCc-ccchHHHHHHHhCCCCCCCCc
Q 018503          177 GTSETEVFDESSPSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGA-LAKMIPLFMMFAGGPLGSGQQ  251 (355)
Q Consensus       177 g~~~~~~~~e~~~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~i~Rp~~i~G~~~~~-~~~~~~~~~~~~~~~~~~~~~  251 (355)
                      ..         .+....| .+|...+.+...+..+   .|+++..++|| +..+.... .....           .....
T Consensus       184 ~~---------~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG-~~t~~~~~~~~~~~-----------~~~~~  242 (322)
T 3qlj_A          184 QG---------SVGQGNYSAAKAGIATLTLVGAAEMGRYGVTVNAIAPS-ARTRMTETVFAEMM-----------ATQDQ  242 (322)
T ss_dssp             HC---------BTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-TTSCCSCCSCCC------------------
T ss_pred             cC---------CCCCccHHHHHHHHHHHHHHHHHHhcccCcEEEEecCC-CCCccchhhhhhhh-----------hcccc
Confidence            21         1234568 7887776666555443   58999999999 54443211 11110           01112


Q ss_pred             ceecccHHHHHHHHHHHHhCCC---CCCceEecCCCcc-----------------CHHHHHHHHHHHhCCC
Q 018503          252 WFSWIHLDDIVNLIYEALSNPS---YRGVINGTAPNPV-----------------RLAEMCDHLGNVLGRP  302 (355)
Q Consensus       252 ~~~~i~v~Dva~~~~~~~~~~~---~~~~~~i~~~~~~-----------------s~~el~~~i~~~~g~~  302 (355)
                      .+.++..+|+|++++.++....   .+..+++.+|...                 ++.|+++.+.+.+|.+
T Consensus       243 ~~~~~~pedva~~v~~L~s~~~~~itG~~i~vdGG~~~~~~~~~~~~~~~~~~~~~~~el~~~~~~~~~~~  313 (322)
T 3qlj_A          243 DFDAMAPENVSPLVVWLGSAEARDVTGKVFEVEGGKIRVAEGWAHGPQIDKGARWDPAELGPVVADLLGKA  313 (322)
T ss_dssp             -CCTTCGGGTHHHHHHHTSGGGGGCCSCEEEEETTEEEEEECCEEEEEEECSSCCCGGGHHHHHHHHHHHS
T ss_pred             ccCCCCHHHHHHHHHHHhCccccCCCCCEEEECCCccccCCCcccccccCccCCCCHHHHHHHHHHHhhcc
Confidence            2356789999999999997543   4558888887644                 7799999999999865

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A

Probab=99.82  E-value=1e-19  Score=156.09  Aligned_cols=225  Identities=14%  Similarity=0.003  Sum_probs=155.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCC-CCccCCCeeecCCcchhhhc-------CCCcEE
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGK-KTRFFPGVMIAEEPQWRDCI-------QGSTAV  120 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~-------~~~d~v  120 (355)
                      ..++++||||+|+||++++++|+++|++|++++|+.+......... .......+|+.|.+++.+++       .++|++
T Consensus         7 ~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~l   86 (255)
T 4eso_A            7 QGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEFGPRVHALRSDIADLNEIAVLGAAAGQTLGAIDLL   86 (255)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHSSEEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            4579999999999999999999999999999999876644322110 00113457888888777655       378999


Q ss_pred             EECCCCCCC---CCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCChh-HH
Q 018503          121 VNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-LA  196 (355)
Q Consensus       121 i~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~~y-~~  196 (355)
                      ||+||....   ...+.+.+...+++|+.++..+++++...-....++|++||...  +..         .+....| .+
T Consensus        87 v~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~--~~~---------~~~~~~Y~as  155 (255)
T 4eso_A           87 HINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFTSSVAD--EGG---------HPGMSVYSAS  155 (255)
T ss_dssp             EECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCGGG--SSB---------CTTBHHHHHH
T ss_pred             EECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEECChhh--cCC---------CCCchHHHHH
Confidence            999997533   23466778889999999999999998762112358999999876  321         1234567 77


Q ss_pred             HHHHHHHHHHhccC---CCCeEEEEEecEEEeCCCCcc---cchHHHH-H-HHhCCCCCCCCcceecccHHHHHHHHHHH
Q 018503          197 EVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGAL---AKMIPLF-M-MFAGGPLGSGQQWFSWIHLDDIVNLIYEA  268 (355)
Q Consensus       197 k~~~~~~~~~~~~~---~~~~~~i~Rp~~i~G~~~~~~---~~~~~~~-~-~~~~~~~~~~~~~~~~i~v~Dva~~~~~~  268 (355)
                      |...+.+.+.+..+   .|+++..++||.+..+.....   ......+ . .....++      ..+.+.+|+|++++.+
T Consensus       156 Kaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~p~------~r~~~pedvA~~v~~L  229 (255)
T 4eso_A          156 KAALVSFASVLAAELLPRGIRVNSVSPGFIDTPTKGVAGITEAERAEFKTLGDNITPM------KRNGTADEVARAVLFL  229 (255)
T ss_dssp             HHHHHHHHHHHHHHTGGGTCEEEEEEECSBCCSSTTCTTSCHHHHHHHHHHHHHHSTT------SSCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhhCcEEEEEecCcccCcccccccCChhhHHHHHHHHhccCCC------CCCcCHHHHHHHHHHH
Confidence            87766666555443   389999999999998753211   1111111 1 1111222      2467899999999999


Q ss_pred             HhCCC--CCCceEecCCCccCHHH
Q 018503          269 LSNPS--YRGVINGTAPNPVRLAE  290 (355)
Q Consensus       269 ~~~~~--~~~~~~i~~~~~~s~~e  290 (355)
                      +....  .+..+++.+|...++.+
T Consensus       230 ~s~~~~itG~~i~vdGG~~~~l~~  253 (255)
T 4eso_A          230 AFEATFTTGAKLAVDGGLGQKLST  253 (255)
T ss_dssp             HHTCTTCCSCEEEESTTTTTTBCC
T ss_pred             cCcCcCccCCEEEECCCccccCcC
Confidence            87632  45589999887666544

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*

Probab=99.82  E-value=1.5e-19  Score=158.06  Aligned_cols=221  Identities=12%  Similarity=-0.008  Sum_probs=151.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhcc-----CCCCCCccCCCeeecCCcchhhhcC-------C
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELI-----FPGKKTRFFPGVMIAEEPQWRDCIQ-------G  116 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-----~~~~~~~~~~~~d~~~~~~~~~~~~-------~  116 (355)
                      .+++||||||+|+||++++++|+++|++|++++|+.......     ...........+|+.|++++.++++       +
T Consensus        46 ~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  125 (291)
T 3ijr_A           46 KGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQETVRQLGS  125 (291)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTTSHHHHHHHHHHHHHHHSS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            457999999999999999999999999999999987542211     1111111134568889888777664       7


Q ss_pred             CcEEEECCCCCCC----CCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCC
Q 018503          117 STAVVNLAGTPIG----TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGN  192 (355)
Q Consensus       117 ~d~vi~~a~~~~~----~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~  192 (355)
                      +|++||+||....    .....+.+...+++|+.++.++++++...-....++|++||...  +..         .+...
T Consensus       126 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~isS~~~--~~~---------~~~~~  194 (291)
T 3ijr_A          126 LNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINTASIVA--YEG---------NETLI  194 (291)
T ss_dssp             CCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEECCTHH--HHC---------CTTCH
T ss_pred             CCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEEechHh--cCC---------CCCCh
Confidence            8999999997432    22356778899999999999999998773223458999999876  421         12345


Q ss_pred             hh-HHHHHHHHHHHHhccC---CCCeEEEEEecEEEeCCCCcccchHHHHHHHhCCCCCCCCcceecccHHHHHHHHHHH
Q 018503          193 DY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEA  268 (355)
Q Consensus       193 ~y-~~k~~~~~~~~~~~~~---~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~  268 (355)
                      .| .+|...+.+.+.+..+   .|+++..++||.++++....... ......     +........+.+.+|+|++++.+
T Consensus       195 ~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~-~~~~~~-----~~~~~p~~r~~~p~dvA~~v~~L  268 (291)
T 3ijr_A          195 DYSATKGAIVAFTRSLSQSLVQKGIRVNGVAPGPIWTPLIPSSFD-EKKVSQ-----FGSNVPMQRPGQPYELAPAYVYL  268 (291)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTHHHHHSC-HHHHHH-----TTTTSTTSSCBCGGGTHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeCCCcCCcccccCC-HHHHHH-----HHccCCCCCCcCHHHHHHHHHHH
Confidence            67 7787766666555443   38999999999998874211000 000111     11122234578899999999999


Q ss_pred             HhCCC---CCCceEecCCCcc
Q 018503          269 LSNPS---YRGVINGTAPNPV  286 (355)
Q Consensus       269 ~~~~~---~~~~~~i~~~~~~  286 (355)
                      +....   .+..+++.+|..+
T Consensus       269 ~s~~~~~itG~~i~vdGG~~~  289 (291)
T 3ijr_A          269 ASSDSSYVTGQMIHVNGGVIV  289 (291)
T ss_dssp             HSGGGTTCCSCEEEESSSCCC
T ss_pred             hCCccCCCcCCEEEECCCccc
Confidence            97643   4558888887543

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2

Probab=99.82  E-value=1.2e-19  Score=158.35  Aligned_cols=217  Identities=13%  Similarity=0.096  Sum_probs=145.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccC----CCCCCccCCCeeecCCcchhhhc-------CCC
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIF----PGKKTRFFPGVMIAEEPQWRDCI-------QGS  117 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~~~~~~~~~~~d~~~~~~~~~~~-------~~~  117 (355)
                      ++++|+||||+|+||+++++.|+++|++|++++|+.+......    ..........+|+.|.+++.+++       .++
T Consensus        43 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~i  122 (285)
T 2c07_A           43 ENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEHKNV  122 (285)
T ss_dssp             SSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHCSCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCceeEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence            3578999999999999999999999999999998765433211    11111113357888888887766       368


Q ss_pred             cEEEECCCCCCC---CCCChhhHHHHHHHhhhhHHHHHHHHHcC--CCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCC
Q 018503          118 TAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGN  192 (355)
Q Consensus       118 d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~  192 (355)
                      |+|||+||....   .....+.+...+++|+.++.++++++...  ..+.+++|++||.... ++.          +...
T Consensus       123 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~-~~~----------~~~~  191 (285)
T 2c07_A          123 DILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGL-TGN----------VGQA  191 (285)
T ss_dssp             CEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHH-HCC----------TTCH
T ss_pred             CEEEECCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhc-cCC----------CCCc
Confidence            999999997532   23456677889999999988777766421  0356799999998651 221          2344


Q ss_pred             hh-HHHHHHHHHHHHhcc---CCCCeEEEEEecEEEeCCCCccc-chHHHHHHHhCCCCCCCCcceecccHHHHHHHHHH
Q 018503          193 DY-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALA-KMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYE  267 (355)
Q Consensus       193 ~y-~~k~~~~~~~~~~~~---~~~~~~~i~Rp~~i~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~  267 (355)
                      .| .+|...+.....+..   ..|+++++++||.+.++...... .+..  ......+.      ..+++.+|+|++++.
T Consensus       192 ~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~--~~~~~~~~------~~~~~~~dvA~~~~~  263 (285)
T 2c07_A          192 NYSSSKAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTDKISEQIKK--NIISNIPA------GRMGTPEEVANLACF  263 (285)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC-----CCHHHHH--HHHTTCTT------SSCBCHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcEecCchhhcCHHHHH--HHHhhCCC------CCCCCHHHHHHHHHH
Confidence            67 777766655544433   24899999999999887532211 1111  11122221      247899999999999


Q ss_pred             HHhCCC---CCCceEecCCC
Q 018503          268 ALSNPS---YRGVINGTAPN  284 (355)
Q Consensus       268 ~~~~~~---~~~~~~i~~~~  284 (355)
                      ++..+.   .+..+++.+|.
T Consensus       264 l~~~~~~~~~G~~i~v~gG~  283 (285)
T 2c07_A          264 LSSDKSGYINGRVFVIDGGL  283 (285)
T ss_dssp             HHSGGGTTCCSCEEEESTTS
T ss_pred             HhCCCcCCCCCCEEEeCCCc
Confidence            997543   35588887764

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2

Probab=99.82  E-value=6.7e-20  Score=157.51  Aligned_cols=218  Identities=15%  Similarity=0.056  Sum_probs=145.8

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCC----CCCCccCCCeeecCCcchhhhcC-------CCc
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP----GKKTRFFPGVMIAEEPQWRDCIQ-------GST  118 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~~d~~~~~~~~~~~~-------~~d  118 (355)
                      +++++||||+|+||++++++|+++|++|++++|+.+.......    .........+|+.|.+++.++++       ++|
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id   81 (256)
T 1geg_A            2 KKVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFD   81 (256)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCCC
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCCC
Confidence            4689999999999999999999999999999998765432211    00001134578999888877765       799


Q ss_pred             EEEECCCCCCC---CCCChhhHHHHHHHhhhhHHHHHHHHHcC--CCC-CCcEEEEeeeeeeeeCCCCCccccCCCCCCC
Q 018503          119 AVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEG-VRPSVLVSATALGYYGTSETEVFDESSPSGN  192 (355)
Q Consensus       119 ~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~-~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~  192 (355)
                      ++||+||....   .....+.+...+++|+.++..+++++...  ..+ .+++|++||.... ++          .+...
T Consensus        82 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~-~~----------~~~~~  150 (256)
T 1geg_A           82 VIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGH-VG----------NPELA  150 (256)
T ss_dssp             EEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGT-SC----------CTTBH
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCEEEEECchhhc-CC----------CCCch
Confidence            99999997432   23456777889999999998887766441  023 5789999997651 22          12234


Q ss_pred             hh-HHHHHHHHHHHHhcc---CCCCeEEEEEecEEEeCCCCcccc---------hHHHHH-HHhCCCCCCCCcceecccH
Q 018503          193 DY-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALAK---------MIPLFM-MFAGGPLGSGQQWFSWIHL  258 (355)
Q Consensus       193 ~y-~~k~~~~~~~~~~~~---~~~~~~~i~Rp~~i~G~~~~~~~~---------~~~~~~-~~~~~~~~~~~~~~~~i~v  258 (355)
                      .| .+|...+.+.+.+..   ..|+++++++||.+.++.......         ...... .....+      ...+.+.
T Consensus       151 ~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p------~~r~~~p  224 (256)
T 1geg_A          151 VYSSSKFAVRGLTQTAARDLAPLGITVNGYCPGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRIT------LGRLSEP  224 (256)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHHHHHHHHHHHTCCTTHHHHHHHTTCT------TCSCBCH
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHcCeEEEEEEECCCccchhhhhhhhccccccCChHHHHHHHHhcCC------CCCCcCH
Confidence            67 777766655554433   248999999999998763111000         000001 111111      1247899


Q ss_pred             HHHHHHHHHHHhCCC---CCCceEecCCC
Q 018503          259 DDIVNLIYEALSNPS---YRGVINGTAPN  284 (355)
Q Consensus       259 ~Dva~~~~~~~~~~~---~~~~~~i~~~~  284 (355)
                      +|+|++++.++..+.   .+..+++.+|.
T Consensus       225 ~dvA~~v~~l~s~~~~~~tG~~i~vdGG~  253 (256)
T 1geg_A          225 EDVAACVSYLASPDSDYMTGQSLLIDGGM  253 (256)
T ss_dssp             HHHHHHHHHHHSGGGTTCCSCEEEESSSS
T ss_pred             HHHHHHHHHHhCccccCCCCCEEEeCCCc
Confidence            999999999997542   34578887774

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*

Probab=99.82  E-value=1.8e-19  Score=156.93  Aligned_cols=221  Identities=10%  Similarity=0.046  Sum_probs=151.2

Q ss_pred             CCCEEEEEcCCch--HHHHHHHHHHhCCCeEEEEecCC--chhhccCCCCCCccCCCeeecCCcchhhhcC-------CC
Q 018503           49 SQMTVSVTGATGF--IGRRLVQRLQADNHQVRVLTRSR--SKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ-------GS  117 (355)
Q Consensus        49 ~~~~IlVtGatG~--iG~~l~~~L~~~g~~V~~~~r~~--~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-------~~  117 (355)
                      +.++|+||||+|+  ||++++++|+++|++|++++|+.  +....+...........+|+.|.+++.++++       .+
T Consensus        25 ~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i  104 (280)
T 3nrc_A           25 AGKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQFKDRVEKLCAEFNPAAVLPCDVISDQEIKDLFVELGKVWDGL  104 (280)
T ss_dssp             TTCEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTTCHHHHHHHHGGGCCSEEEECCTTCHHHHHHHHHHHHHHCSSC
T ss_pred             CCCEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCchHHHHHHHHHHhcCCceEEEeecCCHHHHHHHHHHHHHHcCCC
Confidence            4579999999977  99999999999999999999987  2222221111111244578999888776663       57


Q ss_pred             cEEEECCCCCCCC--------CCChhhHHHHHHHhhhhHHHHHHHHHcC-CCCCCcEEEEeeeeeeeeCCCCCccccCCC
Q 018503          118 TAVVNLAGTPIGT--------RWSSEIKKEIKESRIRVTSKVVDLINES-PEGVRPSVLVSATALGYYGTSETEVFDESS  188 (355)
Q Consensus       118 d~vi~~a~~~~~~--------~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~  188 (355)
                      |++||+||.....        ....+.+...+++|+.++.++++++... .....++|++||...  +..         .
T Consensus       105 d~li~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~isS~~~--~~~---------~  173 (280)
T 3nrc_A          105 DAIVHSIAFAPRDQLEGNFIDCVTREGFSIAHDISAYSFAALAKEGRSMMKNRNASMVALTYIGA--EKA---------M  173 (280)
T ss_dssp             CEEEECCCCCCGGGSSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECGGG--TSC---------C
T ss_pred             CEEEECCccCCCcccCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEecccc--ccC---------C
Confidence            9999999975321        1566777889999999999999887652 124578999999876  321         2


Q ss_pred             CCCChh-HHHHHHHHHHHHhccC---CCCeEEEEEecEEEeCCCCcccchHHHH-HHHhCCCCCCCCcceecccHHHHHH
Q 018503          189 PSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLF-MMFAGGPLGSGQQWFSWIHLDDIVN  263 (355)
Q Consensus       189 ~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~i~Rp~~i~G~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~v~Dva~  263 (355)
                      +....| .+|...+.+.+.+..+   .|+++..++||.+..+............ ......+.      ..+...+|+|+
T Consensus       174 ~~~~~Y~asKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~------~~~~~pedvA~  247 (280)
T 3nrc_A          174 PSYNTMGVAKASLEATVRYTALALGEDGIKVNAVSAGPIKTLAASGISNFKKMLDYNAMVSPL------KKNVDIMEVGN  247 (280)
T ss_dssp             TTTHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCSGGGGCTTHHHHHHHHHHHSTT------CSCCCHHHHHH
T ss_pred             CCchhhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeccccchhhhcCcchHHHHHHHHhcCCC------CCCCCHHHHHH
Confidence            234567 7787666665544432   5899999999999987543222111111 11111222      23688999999


Q ss_pred             HHHHHHhCCC---CCCceEecCCCcc
Q 018503          264 LIYEALSNPS---YRGVINGTAPNPV  286 (355)
Q Consensus       264 ~~~~~~~~~~---~~~~~~i~~~~~~  286 (355)
                      +++.++....   .+..+++.+|..+
T Consensus       248 ~v~~l~s~~~~~~tG~~i~vdgG~~~  273 (280)
T 3nrc_A          248 TVAFLCSDMATGITGEVVHVDAGYHC  273 (280)
T ss_dssp             HHHHTTSGGGTTCCSCEEEESTTGGG
T ss_pred             HHHHHhCcccCCcCCcEEEECCCccc
Confidence            9999997543   4558888887643

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E

Probab=99.82  E-value=1.3e-19  Score=154.88  Aligned_cols=218  Identities=15%  Similarity=0.070  Sum_probs=151.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCC-CccCCCeeecCCcchhhhcC-------CCcEE
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKK-TRFFPGVMIAEEPQWRDCIQ-------GSTAV  120 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~d~~~~~~~~~~~~-------~~d~v  120 (355)
                      ++++++||||+|+||++++++|+++|++|++++|+.+.......... ......+|+.|++++.++++       ++|++
T Consensus         8 ~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l   87 (248)
T 3op4_A            8 EGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKGMALNVTNPESIEAVLKAITDEFGGVDIL   87 (248)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHCCCSEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcccceEEEEeCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            35789999999999999999999999999999998765443221100 00134578999988877764       78999


Q ss_pred             EECCCCCCC---CCCChhhHHHHHHHhhhhHHHHHHHHHcC--CCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCChh-
Q 018503          121 VNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-  194 (355)
Q Consensus       121 i~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~~y-  194 (355)
                      ||+||....   ...+.+.+...+++|+.++..+++++...  ..+..++|++||.... ++          .+....| 
T Consensus        88 v~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~-~~----------~~~~~~Y~  156 (248)
T 3op4_A           88 VNNAGITRDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKRQGRIINVGSVVGT-MG----------NAGQANYA  156 (248)
T ss_dssp             EECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHH-HC----------CTTCHHHH
T ss_pred             EECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhc-CC----------CCCChHHH
Confidence            999997533   23466778899999999999998876431  1355789999997652 22          1234567 


Q ss_pred             HHHHHHHHHHHHhcc---CCCCeEEEEEecEEEeCCCCcccchHHHHHHHhCCCCCCCCcceecccHHHHHHHHHHHHhC
Q 018503          195 LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSN  271 (355)
Q Consensus       195 ~~k~~~~~~~~~~~~---~~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~  271 (355)
                      .+|...+.+.+.+..   ..|+++..++||.+..+......... ........+.      ..+.+.+|+|++++.++..
T Consensus       157 asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~-~~~~~~~~p~------~r~~~p~dva~~v~~L~s~  229 (248)
T 3op4_A          157 AAKAGVIGFTKSMAREVASRGVTVNTVAPGFIETDMTKALNDEQ-RTATLAQVPA------GRLGDPREIASAVAFLASP  229 (248)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSTTTTTSCHHH-HHHHHHTCTT------CSCBCHHHHHHHHHHHHSG
T ss_pred             HHHHHHHHHHHHHHHHHHHhCeEEEEEeeCCCCCchhhhcCHHH-HHHHHhcCCC------CCCcCHHHHHHHHHHHcCC
Confidence            778766655554443   24899999999999877543221110 1112222222      3478999999999999975


Q ss_pred             CC---CCCceEecCCC
Q 018503          272 PS---YRGVINGTAPN  284 (355)
Q Consensus       272 ~~---~~~~~~i~~~~  284 (355)
                      ..   .+..+++.+|.
T Consensus       230 ~~~~itG~~i~vdgG~  245 (248)
T 3op4_A          230 EAAYITGETLHVNGGM  245 (248)
T ss_dssp             GGTTCCSCEEEESTTS
T ss_pred             ccCCccCcEEEECCCe
Confidence            43   35588888775

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}

Probab=99.81  E-value=8.1e-20  Score=158.44  Aligned_cols=219  Identities=15%  Similarity=0.063  Sum_probs=141.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEE-ecCCchhhccCC----CCCCccCCCeeecCCcchhhhcC-------C
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVL-TRSRSKAELIFP----GKKTRFFPGVMIAEEPQWRDCIQ-------G  116 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~-~r~~~~~~~~~~----~~~~~~~~~~d~~~~~~~~~~~~-------~  116 (355)
                      ++++|+||||+|+||++++++|+++|++|+++ .|+.+.......    .........+|+.|.+++.++++       +
T Consensus        25 ~~k~vlITGas~gIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~  104 (272)
T 4e3z_A           25 DTPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITESGGEAVAIPGDVGNAADIAAMFSAVDRQFGR  104 (272)
T ss_dssp             CSCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence            45789999999999999999999999999887 555443322111    01111134568888888776664       7


Q ss_pred             CcEEEECCCCCCC----CCCChhhHHHHHHHhhhhHHHHHHHHHcC-C----CCCCcEEEEeeeeeeeeCCCCCccccCC
Q 018503          117 STAVVNLAGTPIG----TRWSSEIKKEIKESRIRVTSKVVDLINES-P----EGVRPSVLVSATALGYYGTSETEVFDES  187 (355)
Q Consensus       117 ~d~vi~~a~~~~~----~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~----~~~~~~v~~Ss~~~~~yg~~~~~~~~e~  187 (355)
                      +|+|||+||....    ...+.+.+...+++|+.++..+++++... .    .+.+++|++||.... ++..        
T Consensus       105 id~li~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~-~~~~--------  175 (272)
T 4e3z_A          105 LDGLVNNAGIVDYPQRVDEMSVERIERMLRVNVTGSILCAAEAVRRMSRLYSGQGGAIVNVSSMAAI-LGSA--------  175 (272)
T ss_dssp             CCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCTHHH-HCCT--------
T ss_pred             CCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhccCCCCEEEEEcchHhc-cCCC--------
Confidence            8999999997532    22356777899999999999998877541 1    135689999997762 2211        


Q ss_pred             CCCCChh-HHHHHHHHHHHHhccC---CCCeEEEEEecEEEeCCCCcccchHHHH-HHHhCCCCCCCCcceecccHHHHH
Q 018503          188 SPSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLF-MMFAGGPLGSGQQWFSWIHLDDIV  262 (355)
Q Consensus       188 ~~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~i~Rp~~i~G~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~v~Dva  262 (355)
                       +....| .+|...+.+...+..+   .|++++.++||.+.++..... ...... .....      .....+.+++|+|
T Consensus       176 -~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~-~~~~~~~~~~~~------~~~~~~~~~edvA  247 (272)
T 4e3z_A          176 -TQYVDYAASKAAIDTFTIGLAREVAAEGIRVNAVRPGIIETDLHASG-GLPDRAREMAPS------VPMQRAGMPEEVA  247 (272)
T ss_dssp             -TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC-------------------C------CTTSSCBCHHHHH
T ss_pred             -CCcchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCCCcCCccccc-CChHHHHHHhhc------CCcCCCcCHHHHH
Confidence             122357 7787766665544443   389999999999988753211 000000 11111      1223467899999


Q ss_pred             HHHHHHHhCCC---CCCceEecCCC
Q 018503          263 NLIYEALSNPS---YRGVINGTAPN  284 (355)
Q Consensus       263 ~~~~~~~~~~~---~~~~~~i~~~~  284 (355)
                      ++++.++....   .+..|++.+|.
T Consensus       248 ~~i~~l~s~~~~~~tG~~i~vdgG~  272 (272)
T 4e3z_A          248 DAILYLLSPSASYVTGSILNVSGGR  272 (272)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             HHHHHHhCCccccccCCEEeecCCC
Confidence            99999997543   35588888763

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}

Probab=99.81  E-value=3.9e-19  Score=155.70  Aligned_cols=219  Identities=14%  Similarity=0.074  Sum_probs=151.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCch--hhcc----CCCCCCccCCCeeecCCcchhhhcC-------
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSK--AELI----FPGKKTRFFPGVMIAEEPQWRDCIQ-------  115 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~--~~~~----~~~~~~~~~~~~d~~~~~~~~~~~~-------  115 (355)
                      .++++|||||+|+||++++++|+++|++|++++|+.+.  ....    ...........+|+.|.+++.++++       
T Consensus        48 ~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  127 (294)
T 3r3s_A           48 KDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLSDESFARSLVHKAREALG  127 (294)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTTCCEEECCCCTTSHHHHHHHHHHHHHHHT
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            45799999999999999999999999999999987432  1111    0001111244579999888776663       


Q ss_pred             CCcEEEECCCCCCC----CCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCCCCccccCCCCCC
Q 018503          116 GSTAVVNLAGTPIG----TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSG  191 (355)
Q Consensus       116 ~~d~vi~~a~~~~~----~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~  191 (355)
                      ++|++||+||....    ...+.+.+...+++|+.++.++++++...-....++|++||...  +..         .+..
T Consensus       128 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~Iv~isS~~~--~~~---------~~~~  196 (294)
T 3r3s_A          128 GLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIITTSSIQA--YQP---------SPHL  196 (294)
T ss_dssp             CCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCGGG--TSC---------CTTC
T ss_pred             CCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECChhh--ccC---------CCCc
Confidence            78999999997431    23466778899999999999999998763122358999999876  432         1234


Q ss_pred             Chh-HHHHHHHHHHHHhccC---CCCeEEEEEecEEEeCCC---CcccchHHHHHHHhCCCCCCCCcceecccHHHHHHH
Q 018503          192 NDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDG---GALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNL  264 (355)
Q Consensus       192 ~~y-~~k~~~~~~~~~~~~~---~~~~~~i~Rp~~i~G~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~  264 (355)
                      ..| .+|...+.+.+.+..+   .|+++..++||.++++..   .......        ..+........+...+|+|++
T Consensus       197 ~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~--------~~~~~~~p~~r~~~p~dvA~~  268 (294)
T 3r3s_A          197 LDYAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGGQTQDKI--------PQFGQQTPMKRAGQPAELAPV  268 (294)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHTTTSCGGGS--------TTTTTTSTTSSCBCGGGGHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCccccccccCCCHHHH--------HHHHhcCCCCCCcCHHHHHHH
Confidence            567 7787766666554443   489999999999987631   0000000        011112223457889999999


Q ss_pred             HHHHHhCCC---CCCceEecCCCcc
Q 018503          265 IYEALSNPS---YRGVINGTAPNPV  286 (355)
Q Consensus       265 ~~~~~~~~~---~~~~~~i~~~~~~  286 (355)
                      ++.++....   .+.++++.+|..+
T Consensus       269 v~~L~s~~~~~itG~~i~vdGG~~l  293 (294)
T 3r3s_A          269 YVYLASQESSYVTAEVHGVCGGEHL  293 (294)
T ss_dssp             HHHHHSGGGTTCCSCEEEESTTCCC
T ss_pred             HHHHhCccccCCCCCEEEECCCccC
Confidence            999997543   4568999888654

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.81  E-value=4e-19  Score=151.55  Aligned_cols=217  Identities=13%  Similarity=0.052  Sum_probs=147.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcC-------CCcEEE
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ-------GSTAVV  121 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-------~~d~vi  121 (355)
                      ++++++||||+|+||++++++|+++|++|++++|+.+.......... .....+|+.|++++.++++       ++|++|
T Consensus         4 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv   82 (245)
T 1uls_A            4 KDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVG-AHPVVMDVADPASVERGFAEALAHLGRLDGVV   82 (245)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTT-CEEEECCTTCHHHHHHHHHHHHHHHSSCCEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcC-CEEEEecCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            34789999999999999999999999999999998765443221100 1134578889888877664       589999


Q ss_pred             ECCCCCCC---CCCChhhHHHHHHHhhhhHHHHHHHHHcC--CCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCChh-H
Q 018503          122 NLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-L  195 (355)
Q Consensus       122 ~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~~y-~  195 (355)
                      |+||....   .....+.+...+++|+.++..+++++...  ..+.+++|++||...  ++.          +....| .
T Consensus        83 n~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~--~~~----------~~~~~Y~a  150 (245)
T 1uls_A           83 HYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASRVY--LGN----------LGQANYAA  150 (245)
T ss_dssp             ECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCGGG--GCC----------TTCHHHHH
T ss_pred             ECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEccchh--cCC----------CCchhHHH
Confidence            99997532   23356677889999999999998877542  135678999999763  542          223457 6


Q ss_pred             HHHHHHHHHHHhcc---CCCCeEEEEEecEEEeCCCCcccchHHHHHHHhCCCCCCCCcceecccHHHHHHHHHHHHhCC
Q 018503          196 AEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNP  272 (355)
Q Consensus       196 ~k~~~~~~~~~~~~---~~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~  272 (355)
                      +|...+.+.+.+..   ..|+++++++||.+..+......... ........+.      ..+.+.+|+|++++.++..+
T Consensus       151 sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~-~~~~~~~~p~------~~~~~~~dvA~~v~~l~s~~  223 (245)
T 1uls_A          151 SMAGVVGLTRTLALELGRWGIRVNTLAPGFIETRMTAKVPEKV-REKAIAATPL------GRAGKPLEVAYAALFLLSDE  223 (245)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTSSSCHHH-HHHHHHTCTT------CSCBCHHHHHHHHHHHHSGG
T ss_pred             HHHHHHHHHHHHHHHHhHhCeEEEEEEeCcCcCcchhhcCHHH-HHHHHhhCCC------CCCcCHHHHHHHHHHHhCch
Confidence            67655544443332   24899999999999877533211100 0111122222      13789999999999999754


Q ss_pred             C---CCCceEecCCCc
Q 018503          273 S---YRGVINGTAPNP  285 (355)
Q Consensus       273 ~---~~~~~~i~~~~~  285 (355)
                      .   .+..+.+.+|..
T Consensus       224 ~~~~tG~~~~vdgG~~  239 (245)
T 1uls_A          224 SSFITGQVLFVDGGRT  239 (245)
T ss_dssp             GTTCCSCEEEESTTTT
T ss_pred             hcCCcCCEEEECCCcc
Confidence            3   345777877653

>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}

Probab=99.81  E-value=2.4e-19  Score=150.78  Aligned_cols=204  Identities=14%  Similarity=0.050  Sum_probs=147.2

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcC---CCcEEEECCCC
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ---GSTAVVNLAGT  126 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~---~~d~vi~~a~~  126 (355)
                      +++++||||+|+||++++++|+++|++|++++|+..                +|+.|++++.++++   ++|++||+||.
T Consensus         6 ~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~----------------~D~~~~~~v~~~~~~~g~id~lv~nAg~   69 (223)
T 3uce_A            6 KTVYVVLGGTSGIGAELAKQLESEHTIVHVASRQTG----------------LDISDEKSVYHYFETIGAFDHLIVTAGS   69 (223)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHCSTTEEEEEESGGGT----------------CCTTCHHHHHHHHHHHCSEEEEEECCCC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEecCCcc----------------cCCCCHHHHHHHHHHhCCCCEEEECCCC
Confidence            468999999999999999999999999999998653                58888888877764   78999999997


Q ss_pred             CCC----CCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCChh-HHHHHHH
Q 018503          127 PIG----TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-LAEVCRE  201 (355)
Q Consensus       127 ~~~----~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~~y-~~k~~~~  201 (355)
                      ...    .+...+.+...+++|+.++..+++++...-....++|++||...  +..         .+....| .+|...+
T Consensus        70 ~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~~sS~~~--~~~---------~~~~~~Y~asK~a~~  138 (223)
T 3uce_A           70 YAPAGKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQGGSITLTSGMLS--RKV---------VANTYVKAAINAAIE  138 (223)
T ss_dssp             CCCCSCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEEEEEEEEECCGGG--TSC---------CTTCHHHHHHHHHHH
T ss_pred             CCCCCCcccCCHHHHHhhheeeeeeHHHHHHHHHhhccCCeEEEEecchhh--ccC---------CCCchHHHHHHHHHH
Confidence            521    23456778889999999999999998762112348999999766  331         2234567 7787777


Q ss_pred             HHHHHhccCCC-CeEEEEEecEEEeCCCCccc-chHHH-H-HHHhCCCCCCCCcceecccHHHHHHHHHHHHhCCC-CCC
Q 018503          202 WEGTALKVNKD-VRLALIRIGIVLGKDGGALA-KMIPL-F-MMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPS-YRG  276 (355)
Q Consensus       202 ~~~~~~~~~~~-~~~~i~Rp~~i~G~~~~~~~-~~~~~-~-~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~-~~~  276 (355)
                      .+.+.+..+.+ +++..++||.+.++...... ..... . ......+.      ..+.+.+|+|++++.++.... .+.
T Consensus       139 ~~~~~la~e~~~i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~dvA~~~~~l~~~~~~tG~  212 (223)
T 3uce_A          139 ATTKVLAKELAPIRVNAISPGLTKTEAYKGMNADDRDAMYQRTQSHLPV------GKVGEASDIAMAYLFAIQNSYMTGT  212 (223)
T ss_dssp             HHHHHHHHHHTTSEEEEEEECSBCSGGGTTSCHHHHHHHHHHHHHHSTT------CSCBCHHHHHHHHHHHHHCTTCCSC
T ss_pred             HHHHHHHHhhcCcEEEEEEeCCCcchhhhhcchhhHHHHHHHHhhcCCC------CCccCHHHHHHHHHHHccCCCCCCc
Confidence            66665555432 99999999999887432211 11111 1 11222222      347899999999999998654 455


Q ss_pred             ceEecCCCcc
Q 018503          277 VINGTAPNPV  286 (355)
Q Consensus       277 ~~~i~~~~~~  286 (355)
                      .+++.+|..+
T Consensus       213 ~i~vdgG~~~  222 (223)
T 3uce_A          213 VIDVDGGALL  222 (223)
T ss_dssp             EEEESTTGGG
T ss_pred             EEEecCCeec
Confidence            8888887644

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}

Probab=99.81  E-value=1.3e-19  Score=156.65  Aligned_cols=219  Identities=14%  Similarity=-0.014  Sum_probs=146.8

Q ss_pred             CCCEEEEEcCCc-hHHHHHHHHHHhCCCeEEEEecCCchhhccC----CCC-CCccCCCeeecCCcchhhhcC-------
Q 018503           49 SQMTVSVTGATG-FIGRRLVQRLQADNHQVRVLTRSRSKAELIF----PGK-KTRFFPGVMIAEEPQWRDCIQ-------  115 (355)
Q Consensus        49 ~~~~IlVtGatG-~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~~~-~~~~~~~~d~~~~~~~~~~~~-------  115 (355)
                      .+++|+||||+| .||++++++|+++|++|++++|+.+......    ... .......+|+.|.+++.++++       
T Consensus        21 ~~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g  100 (266)
T 3o38_A           21 KGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTSTEAVDALITQTVEKAG  100 (266)
T ss_dssp             TTCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCCCHHHHHHHHHHHHHHhC
Confidence            457999999998 5999999999999999999999876543321    110 111134578889888877664       


Q ss_pred             CCcEEEECCCCCCC---CCCChhhHHHHHHHhhhhHHHHHHHHHcC--C-CCCCcEEEEeeeeeeeeCCCCCccccCCCC
Q 018503          116 GSTAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--P-EGVRPSVLVSATALGYYGTSETEVFDESSP  189 (355)
Q Consensus       116 ~~d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~-~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~  189 (355)
                      .+|++||+||....   .....+.+...+++|+.++.++++++...  . .+..++|++||...  +..         .+
T Consensus       101 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~--~~~---------~~  169 (266)
T 3o38_A          101 RLDVLVNNAGLGGQTPVVDMTDEEWDRVLNVTLTSVMRATRAALRYFRGVDHGGVIVNNASVLG--WRA---------QH  169 (266)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSCCEEEEEECCGGG--TCC---------CT
T ss_pred             CCcEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeCCHHH--cCC---------CC
Confidence            68999999997533   23456777889999999999998877542  1 15568999998765  321         22


Q ss_pred             CCChh-HHHHHHHHHHHHhccC---CCCeEEEEEecEEEeCCCCcccchHHHHHHHhCCCCCCCCcceecccHHHHHHHH
Q 018503          190 SGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLI  265 (355)
Q Consensus       190 ~~~~y-~~k~~~~~~~~~~~~~---~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~  265 (355)
                      ....| .+|...+.+.+.+..+   .|+++..++||.+..+....... .....     .+........+.+.+|+|+++
T Consensus       170 ~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~-~~~~~-----~~~~~~~~~r~~~~~dva~~i  243 (266)
T 3o38_A          170 SQSHYAAAKAGVMALTRCSAIEAVEFGVRINAVSPSIARHKFLEKTSS-SELLD-----RLASDEAFGRAAEPWEVAATI  243 (266)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC-----------------------CCTTSSCCCHHHHHHHH
T ss_pred             CCchHHHHHHHHHHHHHHHHHHHHHcCcEEEEEeCCcccchhhhccCc-HHHHH-----HHHhcCCcCCCCCHHHHHHHH
Confidence            34567 7787777666554443   58999999999998764321100 00000     011122234578999999999


Q ss_pred             HHHHhCCC---CCCceEecCCC
Q 018503          266 YEALSNPS---YRGVINGTAPN  284 (355)
Q Consensus       266 ~~~~~~~~---~~~~~~i~~~~  284 (355)
                      +.++....   .+.++++.+|.
T Consensus       244 ~~l~s~~~~~~tG~~i~vdgG~  265 (266)
T 3o38_A          244 AFLASDYSSYMTGEVVSVSSQR  265 (266)
T ss_dssp             HHHHSGGGTTCCSCEEEESSCC
T ss_pred             HHHcCccccCccCCEEEEcCCc
Confidence            99998643   45588887764

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=99.81  E-value=8.4e-20  Score=157.55  Aligned_cols=221  Identities=14%  Similarity=0.129  Sum_probs=151.3

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCC----CCCCccCCCeeecCCcchhhhcC-------C
Q 018503           48 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP----GKKTRFFPGVMIAEEPQWRDCIQ-------G  116 (355)
Q Consensus        48 ~~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~~d~~~~~~~~~~~~-------~  116 (355)
                      ...+++|||||+|+||++++++|+++|++|++++|+.+.......    .........+|+.|++++.++++       +
T Consensus         9 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   88 (264)
T 3ucx_A            9 LTDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGRRALSVGTDITDDAQVAHLVDETMKAYGR   88 (264)
T ss_dssp             TTTCEEEEESCCTTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTSC
T ss_pred             cCCcEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            345799999999999999999999999999999998765433211    11111134578999888877664       6


Q ss_pred             CcEEEECCCCCCC----CCCChhhHHHHHHHhhhhHHHHHHHHHcC-CCCCCcEEEEeeeeeeeeCCCCCccccCCCCCC
Q 018503          117 STAVVNLAGTPIG----TRWSSEIKKEIKESRIRVTSKVVDLINES-PEGVRPSVLVSATALGYYGTSETEVFDESSPSG  191 (355)
Q Consensus       117 ~d~vi~~a~~~~~----~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~  191 (355)
                      +|++||+||....    ...+.+.+...+++|+.++.++++++... .....++|++||...  +..         .+..
T Consensus        89 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~g~iv~isS~~~--~~~---------~~~~  157 (264)
T 3ucx_A           89 VDVVINNAFRVPSMKPFANTTFEHMRDAIELTVFGALRLIQGFTPALEESKGAVVNVNSMVV--RHS---------QAKY  157 (264)
T ss_dssp             CSEEEECCCSCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHTCEEEEECCGGG--GCC---------CTTC
T ss_pred             CcEEEECCCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEECcchh--ccC---------CCcc
Confidence            8999999986311    24456778889999999999998876431 012268999999876  321         2234


Q ss_pred             Chh-HHHHHHHHHHHHhccC---CCCeEEEEEecEEEeCCCCcccc---------hHHHH-HHHhCCCCCCCCcceeccc
Q 018503          192 NDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAK---------MIPLF-MMFAGGPLGSGQQWFSWIH  257 (355)
Q Consensus       192 ~~y-~~k~~~~~~~~~~~~~---~~~~~~i~Rp~~i~G~~~~~~~~---------~~~~~-~~~~~~~~~~~~~~~~~i~  257 (355)
                      ..| .+|...+.+.+.+..+   .|+++..++||.++++.......         .-... .....      .....+.+
T Consensus       158 ~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~p~~r~~~  231 (264)
T 3ucx_A          158 GAYKMAKSALLAMSQTLATELGEKGIRVNSVLPGYIWGGTLKSYFEHQAGKYGTSVEDIYNAAAAG------SDLKRLPT  231 (264)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEESSCBSHHHHHHHHHHHHHTTCCHHHHHHHHHTT------SSSSSCCB
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCccCeEEEEEecCccccccHHHHHHhhhhhcCCCHHHHHHHHhcc------CCcccCCC
Confidence            567 7787766666555443   58999999999998864211100         00001 11111      22235789


Q ss_pred             HHHHHHHHHHHHhCCC---CCCceEecCCCc
Q 018503          258 LDDIVNLIYEALSNPS---YRGVINGTAPNP  285 (355)
Q Consensus       258 v~Dva~~~~~~~~~~~---~~~~~~i~~~~~  285 (355)
                      .+|+|++++.++....   .+..+++.+|..
T Consensus       232 p~dvA~~v~~L~s~~~~~itG~~i~vdGG~~  262 (264)
T 3ucx_A          232 EDEVASAILFMASDLASGITGQALDVNCGEY  262 (264)
T ss_dssp             HHHHHHHHHHHHSGGGTTCCSCEEEESTTSS
T ss_pred             HHHHHHHHHHHcCccccCCCCCEEEECCCcc
Confidence            9999999999997543   455888888764

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}

Probab=99.81  E-value=3.4e-19  Score=157.94  Aligned_cols=230  Identities=14%  Similarity=0.090  Sum_probs=144.8

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchh-----hccCC----CCCCccCCCeeecCCcchhhhcC-----
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKA-----ELIFP----GKKTRFFPGVMIAEEPQWRDCIQ-----  115 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-----~~~~~----~~~~~~~~~~d~~~~~~~~~~~~-----  115 (355)
                      +++||||||+|+||++++++|+++|++|++++|+....     ..+..    .........+|+.|.+++.++++     
T Consensus         5 ~k~vlVTGas~GIG~aia~~L~~~G~~V~~~~r~~~~r~~~~~~~l~~~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~~~~   84 (324)
T 3u9l_A            5 KKIILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLELDVQSQVSVDRAIDQIIGE   84 (324)
T ss_dssp             CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCTTTTTHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEecCcccccCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHH
Confidence            46899999999999999999999999999999974211     11100    00001134578999988887775     


Q ss_pred             --CCcEEEECCCCCCC---CCCChhhHHHHHHHhhhhHHHHHHHH----HcCCCCCCcEEEEeeeeeeeeCCCCCccccC
Q 018503          116 --GSTAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLI----NESPEGVRPSVLVSATALGYYGTSETEVFDE  186 (355)
Q Consensus       116 --~~d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~----~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e  186 (355)
                        ++|++|||||....   ...+.+.....+++|+.++.++++++    ++  .+.+++|++||...  +...       
T Consensus        85 ~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~a~lp~m~~--~~~g~iV~isS~~~--~~~~-------  153 (324)
T 3u9l_A           85 DGRIDVLIHNAGHMVFGPAEAFTPEQFAELYDINVLSTQRVNRAALPHMRR--QKHGLLIWISSSSS--AGGT-------  153 (324)
T ss_dssp             HSCCSEEEECCCCCBCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHH--HTCEEEEEECCGGG--TSCC-------
T ss_pred             cCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh--cCCCEEEEEecchh--ccCC-------
Confidence              79999999997532   23456777889999999999999987    44  46678999999876  3211       


Q ss_pred             CCCCCChh-HHHHHHHHHHHHhccC---CCCeEEEEEecEEEeCCCCc-----ccchHHHHHHHhCCCCCCCCcc-----
Q 018503          187 SSPSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGA-----LAKMIPLFMMFAGGPLGSGQQW-----  252 (355)
Q Consensus       187 ~~~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~i~Rp~~i~G~~~~~-----~~~~~~~~~~~~~~~~~~~~~~-----  252 (355)
                       .+....| .+|...+.+.+.+..+   .|+++++++||.+.++....     ................+..+..     
T Consensus       154 -~~~~~~Y~asKaa~~~~~~~la~el~~~gI~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (324)
T 3u9l_A          154 -PPYLAPYFAAKAAMDAIAVQYARELSRWGIETSIIVPGAFTSGTNHFAHSGVPDDHARQAEYEAGPNAGLGEEIKKAFA  232 (324)
T ss_dssp             -CSSCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCC---------CBCCSCHHHHHHHHHTTTTTHHHHHHHHHH
T ss_pred             -CCcchhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEECCccccCchhhcccCCchHHHHHHhhccccccCCHHHHHHHHH
Confidence             1123457 7887777766655543   58999999999997653211     0001111111111111000000     


Q ss_pred             ---eecccHHHHHHHHHHHHhCCC-CCC-ceEecCCCccCHHHHH
Q 018503          253 ---FSWIHLDDIVNLIYEALSNPS-YRG-VINGTAPNPVRLAEMC  292 (355)
Q Consensus       253 ---~~~i~v~Dva~~~~~~~~~~~-~~~-~~~i~~~~~~s~~el~  292 (355)
                         .+..+.+|+|++++.++..+. ... .+.+ ++....+..+.
T Consensus       233 ~l~~~~~~p~~vA~aiv~~~~~~~~~~~~~~~~-gp~~~~~~~~~  276 (324)
T 3u9l_A          233 AIVPPDADVSLVADAIVRVVGTASGKRPFRVHV-DPAEDGADVGF  276 (324)
T ss_dssp             HTSCTTCCTHHHHHHHHHHHTSCTTCCCSEEEE-CTTCCSHHHHH
T ss_pred             HhcCCCCCHHHHHHHHHHHhcCCCCCCCeEEEe-CCcchHHHHHH
Confidence               112588999999999998874 223 4444 44335533333

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*

Probab=99.81  E-value=1.7e-19  Score=153.61  Aligned_cols=204  Identities=15%  Similarity=0.077  Sum_probs=143.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcC---------CCcE
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ---------GSTA  119 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~---------~~d~  119 (355)
                      ++|+|+||||+|+||++++++|+++|++|++++|+.+.....      .....+|+.|++++.++++         ++|+
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~------~~~~~~D~~~~~~v~~~~~~~~~~~~~g~iD~   79 (241)
T 1dhr_A            6 EARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEASA------SVIVKMTDSFTEQADQVTAEVGKLLGDQKVDA   79 (241)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTSSE------EEECCCCSCHHHHHHHHHHHHHHHHTTCCEEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCChhhccCC------cEEEEcCCCCHHHHHHHHHHHHHHhCCCCCCE
Confidence            457899999999999999999999999999999987653211      0144579998887776654         6899


Q ss_pred             EEECCCCCCCC----CCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCChh-
Q 018503          120 VVNLAGTPIGT----RWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-  194 (355)
Q Consensus       120 vi~~a~~~~~~----~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~~y-  194 (355)
                      +||+||.....    ....+.+...+++|+.++..+++++...-...+++|++||...  +..         .+....| 
T Consensus        80 lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~iv~isS~~~--~~~---------~~~~~~Y~  148 (241)
T 1dhr_A           80 ILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAA--LDG---------TPGMIGYG  148 (241)
T ss_dssp             EEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGG--GSC---------CTTBHHHH
T ss_pred             EEEcccccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCEEEEECCHHH--ccC---------CCCchHHH
Confidence            99999975322    2234566788999999999999888652011358999999876  321         1233467 


Q ss_pred             HHHHHHHHHHHHhccC-----CCCeEEEEEecEEEeCCCCcccchHHHHHHHhCCCCCCCCcceecccHHHHHHHHHHHH
Q 018503          195 LAEVCREWEGTALKVN-----KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEAL  269 (355)
Q Consensus       195 ~~k~~~~~~~~~~~~~-----~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~  269 (355)
                      .+|...+.+.+.+..+     .|++++.++||.+..+.       ....  ..      ......++..+|+|++++.++
T Consensus       149 asK~a~~~~~~~la~e~~~~~~gi~v~~v~PG~v~T~~-------~~~~--~~------~~~~~~~~~~~~vA~~v~~l~  213 (241)
T 1dhr_A          149 MAKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPM-------NRKS--MP------EADFSSWTPLEFLVETFHDWI  213 (241)
T ss_dssp             HHHHHHHHHHHHHTSTTSSCCTTCEEEEEEESCEECHH-------HHHH--ST------TSCGGGSEEHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhccCCCCeEEEEEecCcccCcc-------cccc--Cc------chhhccCCCHHHHHHHHHHHh
Confidence            7787777776665543     46999999999887652       1100  00      011234678899999999999


Q ss_pred             hCCC---CCCceEecCCC
Q 018503          270 SNPS---YRGVINGTAPN  284 (355)
Q Consensus       270 ~~~~---~~~~~~i~~~~  284 (355)
                      ....   .+..+.+.++.
T Consensus       214 ~~~~~~~~G~~~~v~g~~  231 (241)
T 1dhr_A          214 TGNKRPNSGSLIQVVTTD  231 (241)
T ss_dssp             TTTTCCCTTCEEEEEEET
T ss_pred             cCCCcCccceEEEEeCCC
Confidence            7643   34467666544

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}

Probab=99.81  E-value=3.1e-19  Score=154.92  Aligned_cols=219  Identities=14%  Similarity=0.073  Sum_probs=147.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCC---CCCCccCCCeeecCCcchhhhcC-------CCc
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP---GKKTRFFPGVMIAEEPQWRDCIQ-------GST  118 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~---~~~~~~~~~~d~~~~~~~~~~~~-------~~d  118 (355)
                      ++++|+||||+|+||++++++|+++|++|++++|+.+.......   .........+|+.|++++.++++       ++|
T Consensus        28 ~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD  107 (276)
T 2b4q_A           28 AGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAYGDCQAIPADLSSEAGARRLAQALGELSARLD  107 (276)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHTTSSCEEECCCCTTSHHHHHHHHHHHHHHCSCCS
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEeeCCCHHHHHHHHHHHHHhcCCCC
Confidence            35789999999999999999999999999999998765432211   00011134579999888776664       789


Q ss_pred             EEEECCCCCCC---CCCChhhHHHHHHHhhhhHHHHHHHHHcC--CCCC----CcEEEEeeeeeeeeCCCCCccccCCCC
Q 018503          119 AVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGV----RPSVLVSATALGYYGTSETEVFDESSP  189 (355)
Q Consensus       119 ~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~----~~~v~~Ss~~~~~yg~~~~~~~~e~~~  189 (355)
                      ++||+||....   .....+.+...+++|+.++..+++++...  ..+.    +++|++||...  +...         +
T Consensus       108 ~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~g~iV~isS~~~--~~~~---------~  176 (276)
T 2b4q_A          108 ILVNNAGTSWGAALESYPVSGWEKVMQLNVTSVFSCIQQLLPLLRRSASAENPARVINIGSVAG--ISAM---------G  176 (276)
T ss_dssp             EEEECCCCCCCCCTTSCCSHHHHHHHHHHTHHHHHHHHHHHHHHHHHCCSSSCEEEEEECCGGG--TCCC---------C
T ss_pred             EEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCEEEEECCHHH--cCCC---------C
Confidence            99999997532   23456777899999999998887765321  0233    78999999876  3211         1


Q ss_pred             CCC-hh-HHHHHHHHHHHHhccC---CCCeEEEEEecEEEeCCCCcc-cchHHHHHHHhCCCCCCCCcceecccHHHHHH
Q 018503          190 SGN-DY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGAL-AKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVN  263 (355)
Q Consensus       190 ~~~-~y-~~k~~~~~~~~~~~~~---~~~~~~i~Rp~~i~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~  263 (355)
                      ... .| .+|...+.+.+.+..+   .|+++++++||.+..+..... ......+......+.      ..+.+.+|+|+
T Consensus       177 ~~~~~Y~asK~a~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~------~r~~~p~dvA~  250 (276)
T 2b4q_A          177 EQAYAYGPSKAALHQLSRMLAKELVGEHINVNVIAPGRFPSRMTRHIANDPQALEADSASIPM------GRWGRPEEMAA  250 (276)
T ss_dssp             CSCTTHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSTTTHHHHHCHHHHHHHHHTSTT------SSCCCHHHHHH
T ss_pred             CCccccHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCcCcchhhcchhHHHHHHhhcCCCC------CCcCCHHHHHH
Confidence            233 68 7787766665554432   489999999999987753211 011111110002222      24789999999


Q ss_pred             HHHHHHhCCC---CCCceEecCCC
Q 018503          264 LIYEALSNPS---YRGVINGTAPN  284 (355)
Q Consensus       264 ~~~~~~~~~~---~~~~~~i~~~~  284 (355)
                      +++.++..+.   .+..+++.+|.
T Consensus       251 ~v~~l~s~~~~~~tG~~i~vdGG~  274 (276)
T 2b4q_A          251 LAISLAGTAGAYMTGNVIPIDGGF  274 (276)
T ss_dssp             HHHHHHSGGGTTCCSCEEEESTTT
T ss_pred             HHHHHhCccccCCCCCEEEeCCCc
Confidence            9999997642   34578887764

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2

Probab=99.81  E-value=3.4e-20  Score=160.40  Aligned_cols=227  Identities=14%  Similarity=0.093  Sum_probs=145.5

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhc----cCCC--CCCccCCCeeecCCcchhhhcC------
Q 018503           48 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAEL----IFPG--KKTRFFPGVMIAEEPQWRDCIQ------  115 (355)
Q Consensus        48 ~~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~----~~~~--~~~~~~~~~d~~~~~~~~~~~~------  115 (355)
                      +++++|+||||+|+||++++++|+++|++|++++|+.+....    +...  ........+|+.|++++.++++      
T Consensus         5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   84 (267)
T 2gdz_A            5 VNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHF   84 (267)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCCHHHHHHHHHHHHHHc
Confidence            345789999999999999999999999999999998755322    1110  0001133578889888877664      


Q ss_pred             -CCcEEEECCCCCCCCCCChhhHHHHHHHhhhhHHHHHH----HHHcCC-CCCCcEEEEeeeeeeeeCCCCCccccCCCC
Q 018503          116 -GSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVD----LINESP-EGVRPSVLVSATALGYYGTSETEVFDESSP  189 (355)
Q Consensus       116 -~~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~----a~~~~~-~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~  189 (355)
                       ++|++||+||...     .+.+...+++|+.++..+.+    .+++.. ...+++|++||...  +..         .+
T Consensus        85 g~id~lv~~Ag~~~-----~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~--~~~---------~~  148 (267)
T 2gdz_A           85 GRLDILVNNAGVNN-----EKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAG--LMP---------VA  148 (267)
T ss_dssp             SCCCEEEECCCCCC-----SSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGG--TSC---------CT
T ss_pred             CCCCEEEECCCCCC-----hhhHHHHHhHHHHHHHHHHHHHHHHHHhccCCCCCEEEEeCCccc--cCC---------CC
Confidence             5799999999642     34567888999987655544    443310 12578999999876  432         12


Q ss_pred             CCChh-HHHHHHHHHHHHh-----ccCCCCeEEEEEecEEEeCCCCcccchHHHHHHHhC--CCCCCCCcceecccHHHH
Q 018503          190 SGNDY-LAEVCREWEGTAL-----KVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAG--GPLGSGQQWFSWIHLDDI  261 (355)
Q Consensus       190 ~~~~y-~~k~~~~~~~~~~-----~~~~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~i~v~Dv  261 (355)
                      ....| .+|...+.+.+.+     ....|+++++++||.+.++........ ........  ..+........+++.+|+
T Consensus       149 ~~~~Y~~sK~a~~~~~~~~ala~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~dv  227 (267)
T 2gdz_A          149 QQPVYCASKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAILESIEKE-ENMGQYIEYKDHIKDMIKYYGILDPPLI  227 (267)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHHHHGGGCH-HHHGGGGGGHHHHHHHHHHHCCBCHHHH
T ss_pred             CCchHHHHHHHHHHHHHHHHHHHHhccCCcEEEEEecCcCcchhhhccccc-cccchhhhHHHHHHHHhccccCCCHHHH
Confidence            33467 7776665554432     224689999999999977531111000 00000000  000000011347899999


Q ss_pred             HHHHHHHHhCCC-CCCceEecCCCccCHHHH
Q 018503          262 VNLIYEALSNPS-YRGVINGTAPNPVRLAEM  291 (355)
Q Consensus       262 a~~~~~~~~~~~-~~~~~~i~~~~~~s~~el  291 (355)
                      |++++.++..+. .+.++++.+++.+++.|+
T Consensus       228 A~~v~~l~s~~~~~G~~~~v~gg~~~~~~~~  258 (267)
T 2gdz_A          228 ANGLITLIEDDALNGAIMKITTSKGIHFQDY  258 (267)
T ss_dssp             HHHHHHHHHCTTCSSCEEEEETTTEEEECCC
T ss_pred             HHHHHHHhcCcCCCCcEEEecCCCcccccCc
Confidence            999999998765 455899999887776653

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}

Probab=99.81  E-value=3.3e-19  Score=153.99  Aligned_cols=220  Identities=15%  Similarity=0.092  Sum_probs=150.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCC-----CCCccCCCeeecCCcchhhhcC-------C
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-----KKTRFFPGVMIAEEPQWRDCIQ-------G  116 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-----~~~~~~~~~d~~~~~~~~~~~~-------~  116 (355)
                      .+++||||||+|+||++++++|+++|++|++++|+.+........     ........+|+.|.+++.++++       +
T Consensus        19 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   98 (266)
T 4egf_A           19 DGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGTDVHTVAIDLAEPDAPAELARRAAEAFGG   98 (266)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSTTHHHHHHHHHHHHHTS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            357899999999999999999999999999999987654322110     0011134579999988877664       7


Q ss_pred             CcEEEECCCCCCC---CCCChhhHHHHHHHhhhhHHHHHHHHHcC--C-CCCCcEEEEeeeeeeeeCCCCCccccCCCCC
Q 018503          117 STAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--P-EGVRPSVLVSATALGYYGTSETEVFDESSPS  190 (355)
Q Consensus       117 ~d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~-~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~  190 (355)
                      +|++||+||....   ...+.+.+...+++|+.++..+++++...  . ....++|++||...  +..         .+.
T Consensus        99 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~--~~~---------~~~  167 (266)
T 4egf_A           99 LDVLVNNAGISHPQPVVDTDPQLFDATIAVNLRAPALLASAVGKAMVAAGEGGAIITVASAAA--LAP---------LPD  167 (266)
T ss_dssp             CSEEEEECCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGG--TSC---------CTT
T ss_pred             CCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEEcchhh--ccC---------CCC
Confidence            8999999997533   23456777889999999999998877431  0 12468999999876  321         223


Q ss_pred             CChh-HHHHHHHHHHHHhccC---CCCeEEEEEecEEEeCCCCcccchHHHH-HHHhCCCCCCCCcceecccHHHHHHHH
Q 018503          191 GNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLF-MMFAGGPLGSGQQWFSWIHLDDIVNLI  265 (355)
Q Consensus       191 ~~~y-~~k~~~~~~~~~~~~~---~~~~~~i~Rp~~i~G~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~v~Dva~~~  265 (355)
                      ...| .+|...+.+.+.+..+   .|+++..++||.+..+............ ......++      ..+...+|+|+++
T Consensus       168 ~~~Y~asK~a~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~------~r~~~p~dva~~v  241 (266)
T 4egf_A          168 HYAYCTSKAGLVMATKVLARELGPHGIRANSVCPTVVLTEMGQRVWGDEAKSAPMIARIPL------GRFAVPHEVSDAV  241 (266)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBCSHHHHHHTCSHHHHHHHHTTCTT------SSCBCHHHHHHHH
T ss_pred             ChHHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCchhhhhccChHHHHHHHhcCCC------CCCcCHHHHHHHH
Confidence            4567 7787666655554443   4899999999999876321110000111 22222222      2468899999999


Q ss_pred             HHHHhCCC---CCCceEecCCCc
Q 018503          266 YEALSNPS---YRGVINGTAPNP  285 (355)
Q Consensus       266 ~~~~~~~~---~~~~~~i~~~~~  285 (355)
                      +.++....   .+..+++.+|..
T Consensus       242 ~~L~s~~~~~itG~~i~vdGG~~  264 (266)
T 4egf_A          242 VWLASDAASMINGVDIPVDGGYT  264 (266)
T ss_dssp             HHHHSGGGTTCCSCEEEESTTGG
T ss_pred             HHHhCchhcCccCcEEEECCCcc
Confidence            99997543   455888888754

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.81  E-value=7.5e-20  Score=155.27  Aligned_cols=203  Identities=15%  Similarity=0.082  Sum_probs=141.4

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcC---------CCcEE
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ---------GSTAV  120 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~---------~~d~v  120 (355)
                      +++|+||||+|+||++++++|+++|++|++++|+.+......      ....+|+.|.+++.++++         ++|+|
T Consensus         3 ~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~------~~~~~D~~~~~~~~~~~~~~~~~~~~g~id~l   76 (236)
T 1ooe_A            3 SGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQADSN------ILVDGNKNWTEQEQSILEQTASSLQGSQVDGV   76 (236)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTSSEE------EECCTTSCHHHHHHHHHHHHHHHHTTCCEEEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecCcccccccc------EEEeCCCCCHHHHHHHHHHHHHHhCCCCCCEE
Confidence            468999999999999999999999999999999876532110      134578888887766653         78999


Q ss_pred             EECCCCCCCC----CCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCChh-H
Q 018503          121 VNLAGTPIGT----RWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-L  195 (355)
Q Consensus       121 i~~a~~~~~~----~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~~y-~  195 (355)
                      ||+||.....    ....+.+...+++|+.++..+++++...-....++|++||...  +..         .+....| .
T Consensus        77 v~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~--~~~---------~~~~~~Y~~  145 (236)
T 1ooe_A           77 FCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAA--MGP---------TPSMIGYGM  145 (236)
T ss_dssp             EECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGG--GSC---------CTTBHHHHH
T ss_pred             EECCcccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEECchhh--ccC---------CCCcHHHHH
Confidence            9999975322    2234566788999999999999887652012358999999876  321         1234567 7


Q ss_pred             HHHHHHHHHHHhccC-----CCCeEEEEEecEEEeCCCCcccchHHHHHHHhCCCCCCCCcceecccHHHHHHHHHHHHh
Q 018503          196 AEVCREWEGTALKVN-----KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALS  270 (355)
Q Consensus       196 ~k~~~~~~~~~~~~~-----~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~  270 (355)
                      +|...+.+.+.+..+     .|++++.++||.+.++.       ....   ..     ......++..+|+|++++.++.
T Consensus       146 sK~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~-------~~~~---~~-----~~~~~~~~~~~dvA~~i~~~l~  210 (236)
T 1ooe_A          146 AKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTPM-------NRKW---MP-----NADHSSWTPLSFISEHLLKWTT  210 (236)
T ss_dssp             HHHHHHHHHHHHHSTTSSCCTTCEEEEEEESCBCCHH-------HHHH---ST-----TCCGGGCBCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhcccCCCeEEEEEecCcccCcc-------hhhc---CC-----CccccccCCHHHHHHHHHHHHc
Confidence            787777666665543     36999999999987752       1100   00     0112346788999999997773


Q ss_pred             CCC----CCCceEecCCC
Q 018503          271 NPS----YRGVINGTAPN  284 (355)
Q Consensus       271 ~~~----~~~~~~i~~~~  284 (355)
                      .+.    .+..+.+.++.
T Consensus       211 s~~~~~~~G~~~~v~gg~  228 (236)
T 1ooe_A          211 ETSSRPSSGALLKITTEN  228 (236)
T ss_dssp             CGGGCCCTTCEEEEEEET
T ss_pred             CCCcccccccEEEEecCC
Confidence            322    34567776654

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}

Probab=99.81  E-value=9.4e-20  Score=160.20  Aligned_cols=222  Identities=11%  Similarity=0.032  Sum_probs=142.3

Q ss_pred             cCCCcccCCCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCC----CCCCccCCCeeecCCcchhhhcC-
Q 018503           41 TSDHTQKASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP----GKKTRFFPGVMIAEEPQWRDCIQ-  115 (355)
Q Consensus        41 ~~~~~~~~~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~~d~~~~~~~~~~~~-  115 (355)
                      |..++....+++||||||+|+||++++++|+++|++|++++|+.+.......    .........+|+.|.+++.++++ 
T Consensus        22 m~~~m~~l~gk~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~  101 (301)
T 3tjr_A           22 MDGFLSGFDGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFDAHGVVCDVRHLDEMVRLADE  101 (301)
T ss_dssp             --CCCCCSTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHH
T ss_pred             chhHHhccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHH
Confidence            4433333456799999999999999999999999999999998766443211    01111134578889888877664 


Q ss_pred             ------CCcEEEECCCCCCC---CCCChhhHHHHHHHhhhhHHHHHHHHHcC--CCC-CCcEEEEeeeeeeeeCCCCCcc
Q 018503          116 ------GSTAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEG-VRPSVLVSATALGYYGTSETEV  183 (355)
Q Consensus       116 ------~~d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~-~~~~v~~Ss~~~~~yg~~~~~~  183 (355)
                            ++|++||+||....   .....+.....+++|+.++.++++++...  ..+ ..++|++||...  +..     
T Consensus       102 ~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~--~~~-----  174 (301)
T 3tjr_A          102 AFRLLGGVDVVFSNAGIVVAGPLAQMNHDDWRWVIDIDLWGSIHAVEAFLPRLLEQGTGGHIAFTASFAG--LVP-----  174 (301)
T ss_dssp             HHHHHSSCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGG--TSC-----
T ss_pred             HHHhCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhh--cCC-----
Confidence                  78999999997532   23456778899999999999999886431  022 568999999876  321     


Q ss_pred             ccCCCCCCChh-HHHHHHHHHHHHhccC---CCCeEEEEEecEEEeCCCCcccchHHH-H--HHHhCCCCCCCCcceecc
Q 018503          184 FDESSPSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPL-F--MMFAGGPLGSGQQWFSWI  256 (355)
Q Consensus       184 ~~e~~~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~i~Rp~~i~G~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~i  256 (355)
                          .+....| .+|...+.+.+.+..+   .|++++.++||.+..+........... .  .......++.......++
T Consensus       175 ----~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (301)
T 3tjr_A          175 ----NAGLGTYGVAKYGVVGLAETLAREVKPNGIGVSVLCPMVVETKLVSNSERIRGADYGMSATPEGAFGPLPTQDESV  250 (301)
T ss_dssp             ----CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEECCSCCCSSHHHHHHHHC----------------------CC
T ss_pred             ----CCCchHHHHHHHHHHHHHHHHHHHhcccCcEEEEEECCccccccccccccccchhhccccChhhhccccccccCCC
Confidence                2234567 7787666555544332   489999999999876531110000000 0  000001112223345689


Q ss_pred             cHHHHHHHHHHHHhCCC
Q 018503          257 HLDDIVNLIYEALSNPS  273 (355)
Q Consensus       257 ~v~Dva~~~~~~~~~~~  273 (355)
                      +++|+|++++.++..+.
T Consensus       251 ~pedvA~~i~~~l~~~~  267 (301)
T 3tjr_A          251 SADDVARLTADAILANR  267 (301)
T ss_dssp             CHHHHHHHHHHHHHHTC
T ss_pred             CHHHHHHHHHHHHhcCC
Confidence            99999999999999764

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2

Probab=99.81  E-value=7.1e-20  Score=157.02  Aligned_cols=220  Identities=13%  Similarity=0.062  Sum_probs=145.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCC-CCCccCCCeeecCCcchhhhcC-------CCcEE
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-KKTRFFPGVMIAEEPQWRDCIQ-------GSTAV  120 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~-------~~d~v  120 (355)
                      +.++|+||||+|+||++++++|+++|++|++++|+.+........ ........+|+.|++++.++++       .+|++
T Consensus         5 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~l   84 (253)
T 1hxh_A            5 QGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGERSMFVRHDVSSEADWTLVMAAVQRRLGTLNVL   84 (253)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEEECCCTTCHHHHHHHHHHHHHHHCSCCEE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            457899999999999999999999999999999987654332110 0001134578999888776664       57999


Q ss_pred             EECCCCCCC---CCCChhhHHHHHHHhhhhHHHHHHHHHcC--CCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCChh-
Q 018503          121 VNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-  194 (355)
Q Consensus       121 i~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~~y-  194 (355)
                      ||+||....   .....+.+...+++|+.++..+.+++...  ..+ +++|++||...  +..         .+....| 
T Consensus        85 v~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-g~iv~isS~~~--~~~---------~~~~~~Y~  152 (253)
T 1hxh_A           85 VNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETG-GSIINMASVSS--WLP---------IEQYAGYS  152 (253)
T ss_dssp             EECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTC-EEEEEECCGGG--TSC---------CTTBHHHH
T ss_pred             EECCCCCCCCCcccCCHHHHHHHHHhhcHHHHHHHHHHHHHHHHcC-CEEEEEcchhh--cCC---------CCCCccHH
Confidence            999997532   23356777889999999877666554321  145 89999999876  431         1233467 


Q ss_pred             HHHHHHHHHHHHhccC---C--CCeEEEEEecEEEeCCCCc-c-cchHHHHHHHhCCCCCCCCcceecccHHHHHHHHHH
Q 018503          195 LAEVCREWEGTALKVN---K--DVRLALIRIGIVLGKDGGA-L-AKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYE  267 (355)
Q Consensus       195 ~~k~~~~~~~~~~~~~---~--~~~~~i~Rp~~i~G~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~  267 (355)
                      .+|...+.+.+.+..+   .  +++++++||+.++++.... . .....  .......  .......+.+.+|+|++++.
T Consensus       153 ~sK~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~--~~~~~~~--~~~p~~~~~~~~dvA~~~~~  228 (253)
T 1hxh_A          153 ASKAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQASLPKGVSK--EMVLHDP--KLNRAGRAYMPERIAQLVLF  228 (253)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESEECCHHHHHHSCTTCCH--HHHBCBT--TTBTTCCEECHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhhcCCCeEEEEEEeCCccCchhhhccchhhhH--HHHhhhh--ccCccCCCCCHHHHHHHHHH
Confidence            7777666655554433   2  8999999999999874211 0 00000  0011100  00112347899999999999


Q ss_pred             HHhCCC---CCCceEecCCC
Q 018503          268 ALSNPS---YRGVINGTAPN  284 (355)
Q Consensus       268 ~~~~~~---~~~~~~i~~~~  284 (355)
                      ++..+.   .+..+++.+|.
T Consensus       229 l~s~~~~~~tG~~~~vdgG~  248 (253)
T 1hxh_A          229 LASDESSVMSGSELHADNSI  248 (253)
T ss_dssp             HHSGGGTTCCSCEEEESSSC
T ss_pred             HcCccccCCCCcEEEECCCc
Confidence            997643   34578887764

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}

Probab=99.81  E-value=1.7e-19  Score=155.42  Aligned_cols=225  Identities=12%  Similarity=0.021  Sum_probs=144.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCC-CCCccCCCeeecCCcchhhhcC-------CCcEE
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-KKTRFFPGVMIAEEPQWRDCIQ-------GSTAV  120 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~-------~~d~v  120 (355)
                      +.++|+||||+|+||++++++|+++|++|++++|+.+........ ........+|+.|.+++.++++       ++|++
T Consensus         8 ~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   87 (261)
T 3n74_A            8 EGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEIGDAALAVAADISKEADVDAAVEAALSKFGKVDIL   87 (261)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHhcCCCCEE
Confidence            357899999999999999999999999999999998765433211 0001134578888888777664       78999


Q ss_pred             EECCCCCCC----CCCChhhHHHHHHHhhhhHHHHHHHHHcC------CCCCCcEEEEeeeeeeeeCCCCCccccCCCCC
Q 018503          121 VNLAGTPIG----TRWSSEIKKEIKESRIRVTSKVVDLINES------PEGVRPSVLVSATALGYYGTSETEVFDESSPS  190 (355)
Q Consensus       121 i~~a~~~~~----~~~~~~~~~~~~~~n~~~~~~l~~a~~~~------~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~  190 (355)
                      ||+||....    .....+.+...+++|+.++.++++++...      .....++|++||...  +..         .+.
T Consensus        88 i~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~iv~isS~~~--~~~---------~~~  156 (261)
T 3n74_A           88 VNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYLMTSKLIPHFKENGAKGQECVILNVASTGA--GRP---------RPN  156 (261)
T ss_dssp             EECCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTTT--TSC---------CTT
T ss_pred             EECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEeCchhh--cCC---------CCC
Confidence            999997531    12356777889999999988888876431      011446999999765  321         123


Q ss_pred             CChh-HHHHHHHHHHHHhccC---CCCeEEEEEecEEEeCCCCcccc-hHHHHHHHhCCCCCCCCcceecccHHHHHHHH
Q 018503          191 GNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAK-MIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLI  265 (355)
Q Consensus       191 ~~~y-~~k~~~~~~~~~~~~~---~~~~~~i~Rp~~i~G~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~  265 (355)
                      ...| .+|...+.+.+.+..+   .++++..++|+.+.++....... .....    ...+........+++.+|+|+++
T Consensus       157 ~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~dva~~~  232 (261)
T 3n74_A          157 LAWYNATKGWVVSVTKALAIELAPAKIRVVALNPVAGETPLLTTFMGEDSEEI----RKKFRDSIPMGRLLKPDDLAEAA  232 (261)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-----------------------------CTTSSCCCHHHHHHHH
T ss_pred             ccHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccChhhhhhcccCcHHH----HHHHhhcCCcCCCcCHHHHHHHH
Confidence            3457 7787666665554443   48999999999998875322100 00000    00111122234589999999999


Q ss_pred             HHHHhCCC---CCCceEecCCCccCH
Q 018503          266 YEALSNPS---YRGVINGTAPNPVRL  288 (355)
Q Consensus       266 ~~~~~~~~---~~~~~~i~~~~~~s~  288 (355)
                      +.++....   .+..+++.+|..++.
T Consensus       233 ~~l~s~~~~~itG~~i~vdgG~~~~~  258 (261)
T 3n74_A          233 AFLCSPQASMITGVALDVDGGRSIGG  258 (261)
T ss_dssp             HHHTSGGGTTCCSCEEEESTTTTC--
T ss_pred             HHHcCCcccCcCCcEEEecCCcccCC
Confidence            99996433   456899998876654

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}

Probab=99.81  E-value=1.5e-19  Score=154.14  Aligned_cols=212  Identities=16%  Similarity=0.099  Sum_probs=147.8

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHh-CCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcC-----CCcEEEEC
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQA-DNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ-----GSTAVVNL  123 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~-~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-----~~d~vi~~  123 (355)
                      ++++|||||+|+||++++++|++ .|+.|++++|+........      ....+|+.|.+++.++++     ++|++||+
T Consensus         4 ~k~vlITGas~gIG~~~a~~l~~~~g~~v~~~~~~~~~~~~~~------~~~~~Dv~~~~~v~~~~~~~~~~~id~lv~n   77 (244)
T 4e4y_A            4 MANYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSFSAENL------KFIKADLTKQQDITNVLDIIKNVSFDGIFLN   77 (244)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHTTSTTEEEEEEESSCCCCCTTE------EEEECCTTCHHHHHHHHHHTTTCCEEEEEEC
T ss_pred             CCeEEEeCCCChHHHHHHHHHHhcCCcEEEEeccccccccccc------eEEecCcCCHHHHHHHHHHHHhCCCCEEEEC
Confidence            46899999999999999999999 7899999999765211111      144579999988887765     68999999


Q ss_pred             CCCCCC---CCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCChh-HHHHH
Q 018503          124 AGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-LAEVC  199 (355)
Q Consensus       124 a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~~y-~~k~~  199 (355)
                      ||....   ...+.+.+...+++|+.++..+++++........++|++||...  +..         .+....| .+|..
T Consensus        78 Ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~~sS~~~--~~~---------~~~~~~Y~asKaa  146 (244)
T 4e4y_A           78 AGILIKGSIFDIDIESIKKVLDLNVWSSIYFIKGLENNLKVGASIVFNGSDQC--FIA---------KPNSFAYTLSKGA  146 (244)
T ss_dssp             CCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHTGGGEEEEEEEEEECCGGG--TCC---------CTTBHHHHHHHHH
T ss_pred             CccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHhccCcEEEEECCHHH--ccC---------CCCCchhHHHHHH
Confidence            997532   34466778899999999999999988762111258999999876  321         1233467 77877


Q ss_pred             HHHHHHHhcc---CCCCeEEEEEecEEEeCCCCccc-chH-------H-HH-HHHhCCCCCCCCcceecccHHHHHHHHH
Q 018503          200 REWEGTALKV---NKDVRLALIRIGIVLGKDGGALA-KMI-------P-LF-MMFAGGPLGSGQQWFSWIHLDDIVNLIY  266 (355)
Q Consensus       200 ~~~~~~~~~~---~~~~~~~i~Rp~~i~G~~~~~~~-~~~-------~-~~-~~~~~~~~~~~~~~~~~i~v~Dva~~~~  266 (355)
                      .+.+.+.+..   ..|+++..++||.+.++...... ...       . .. .....      .....+.+.+|+|++++
T Consensus       147 ~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~p~~r~~~p~dvA~~v~  220 (244)
T 4e4y_A          147 IAQMTKSLALDLAKYQIRVNTVCPGTVDTDLYRNLIQKYANNVGISFDEAQKQEEKE------FPLNRIAQPQEIAELVI  220 (244)
T ss_dssp             HHHHHHHHHHHHGGGTCEEEEEEESCBCCHHHHHHHHHHHHHHTCCHHHHHHHHHTT------STTSSCBCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHcCeEEEEEecCccCchhhHHHHHhhhhhcCCCHHHHHHHHhhc------CCCCCCcCHHHHHHHHH
Confidence            7666655544   35899999999999876321110 000       0 01 11111      12234789999999999


Q ss_pred             HHHhCCC---CCCceEecCCC
Q 018503          267 EALSNPS---YRGVINGTAPN  284 (355)
Q Consensus       267 ~~~~~~~---~~~~~~i~~~~  284 (355)
                      .++..+.   .+..+++.+|.
T Consensus       221 ~l~s~~~~~itG~~i~vdGG~  241 (244)
T 4e4y_A          221 FLLSDKSKFMTGGLIPIDGGY  241 (244)
T ss_dssp             HHHSGGGTTCCSCEEEESTTG
T ss_pred             HHhcCccccccCCeEeECCCc
Confidence            9997543   35588887774

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}

Probab=99.81  E-value=4.2e-19  Score=152.70  Aligned_cols=219  Identities=18%  Similarity=0.095  Sum_probs=147.3

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCch--hhccC----CCCCCccCCCeeecCCcchhhhcC-------C
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSK--AELIF----PGKKTRFFPGVMIAEEPQWRDCIQ-------G  116 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~--~~~~~----~~~~~~~~~~~d~~~~~~~~~~~~-------~  116 (355)
                      +++++||||+|+||++++++|+++|++|++++|+.+.  .....    ..........+|+.|.+++.++++       +
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   81 (258)
T 3a28_C            2 SKVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAADQKAVFVGLDVTDKANFDSAIDEAAEKLGG   81 (258)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECGGGHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHTC
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            4689999999999999999999999999999998765  32211    111111134578888888877664       7


Q ss_pred             CcEEEECCCCCCCC---CCChhhHHHHHHHhhhhHHHHHHHHHcC--CCCC-CcEEEEeeeeeeeeCCCCCccccCCCCC
Q 018503          117 STAVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PEGV-RPSVLVSATALGYYGTSETEVFDESSPS  190 (355)
Q Consensus       117 ~d~vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~-~~~v~~Ss~~~~~yg~~~~~~~~e~~~~  190 (355)
                      +|++||+||.....   ....+.+...+++|+.++.++++++...  ..+. +++|++||...  +..         .+.
T Consensus        82 iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~--~~~---------~~~  150 (258)
T 3a28_C           82 FDVLVNNAGIAQIKPLLEVTEEDLKQIYSVNVFSVFFGIQAASRKFDELGVKGKIINAASIAA--IQG---------FPI  150 (258)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCCEEEEECCGGG--TSC---------CTT
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCcEEEEECcchh--ccC---------CCC
Confidence            99999999975321   3356777889999999999998877541  0244 79999999765  321         123


Q ss_pred             CChh-HHHHHHHHHHHHhcc---CCCCeEEEEEecEEEeCCCCc-ccch--------HHHH-HHHhCCCCCCCCcceecc
Q 018503          191 GNDY-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGA-LAKM--------IPLF-MMFAGGPLGSGQQWFSWI  256 (355)
Q Consensus       191 ~~~y-~~k~~~~~~~~~~~~---~~~~~~~i~Rp~~i~G~~~~~-~~~~--------~~~~-~~~~~~~~~~~~~~~~~i  256 (355)
                      ...| .+|...+.+.+.+..   ..++++++++||.+..+.... ...+        .... ......+      ...+.
T Consensus       151 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p------~~r~~  224 (258)
T 3a28_C          151 LSAYSTTKFAVRGLTQAAAQELAPKGHTVNAYAPGIVGTGMWEQIDAELSKINGKPIGENFKEYSSSIA------LGRPS  224 (258)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSHHHHHHHHHHHHHHCCCTTHHHHHHHTTCT------TSSCB
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHhhCeEEEEEECCccCChhhhhhhhhhccccCCchHHHHHHHHhcCC------CCCcc
Confidence            4567 777766655554433   248999999999987653111 0000        0001 1111111      12478


Q ss_pred             cHHHHHHHHHHHHhCCC---CCCceEecCCCc
Q 018503          257 HLDDIVNLIYEALSNPS---YRGVINGTAPNP  285 (355)
Q Consensus       257 ~v~Dva~~~~~~~~~~~---~~~~~~i~~~~~  285 (355)
                      +.+|+|++++.++..+.   .+..+++.+|..
T Consensus       225 ~p~dvA~~v~~l~s~~~~~~tG~~i~vdGG~~  256 (258)
T 3a28_C          225 VPEDVAGLVSFLASENSNYVTGQVMLVDGGML  256 (258)
T ss_dssp             CHHHHHHHHHHHHSGGGTTCCSCEEEESSSSC
T ss_pred             CHHHHHHHHHHHhCcccCCCCCCEEEECCCEe
Confidence            99999999999997543   345788877753

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*

Probab=99.81  E-value=2.8e-19  Score=152.71  Aligned_cols=217  Identities=17%  Similarity=0.108  Sum_probs=148.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCC-CCCccCCCeeecCCcchhhhcC-------CCcEE
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-KKTRFFPGVMIAEEPQWRDCIQ-------GSTAV  120 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~-------~~d~v  120 (355)
                      ..++++||||+|+||+++++.|+++|++|++++|+.+........ ........+|+.|++++.++++       ++|++
T Consensus         5 ~gk~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~l   84 (247)
T 3rwb_A            5 AGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASIGKKARAIAADISDPGSVKALFAEIQALTGGIDIL   84 (247)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEECCCCTTCHHHHHHHHHHHHHHHSCCSEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHCCCCCEE
Confidence            457999999999999999999999999999999987654432111 0111145679999988877764       78999


Q ss_pred             EECCCCCCC---CCCChhhHHHHHHHhhhhHHHHHHHHHcC--CCC-CCcEEEEeeeeeeeeCCCCCccccCCCCCCChh
Q 018503          121 VNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEG-VRPSVLVSATALGYYGTSETEVFDESSPSGNDY  194 (355)
Q Consensus       121 i~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~-~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~~y  194 (355)
                      ||+||....   ...+.+.+...+++|+.++.++++++...  ..+ ..++|++||...  +..         .+....|
T Consensus        85 v~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~--~~~---------~~~~~~Y  153 (247)
T 3rwb_A           85 VNNASIVPFVAWDDVDLDHWRKIIDVNLTGTFIVTRAGTDQMRAAGKAGRVISIASNTF--FAG---------TPNMAAY  153 (247)
T ss_dssp             EECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHH--HHT---------CTTCHHH
T ss_pred             EECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCcEEEEECchhh--ccC---------CCCchhh
Confidence            999997533   23456778889999999999998874221  023 578999999765  321         1234567


Q ss_pred             -HHHHHHHHHHHHhccC---CCCeEEEEEecEEEeCCCCcc--cchHHHHHHHhCCCCCCCCcceecccHHHHHHHHHHH
Q 018503          195 -LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGAL--AKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEA  268 (355)
Q Consensus       195 -~~k~~~~~~~~~~~~~---~~~~~~i~Rp~~i~G~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~  268 (355)
                       .+|...+.+.+.+..+   .|+++..++||.+..+.....  ..........  .++      ..+...+|+|+++..+
T Consensus       154 ~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~--~~~------~r~~~pedva~~v~~L  225 (247)
T 3rwb_A          154 VAAKGGVIGFTRALATELGKYNITANAVTPGLIESDGVKASPHNEAFGFVEML--QAM------KGKGQPEHIADVVSFL  225 (247)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSGGGGGHHHHHHH--SSS------CSCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCccccccChhHHHHHHhcc--ccc------CCCcCHHHHHHHHHHH
Confidence             7786666555544433   589999999999987532110  0111111110  111      2367899999999999


Q ss_pred             HhCCC---CCCceEecCCC
Q 018503          269 LSNPS---YRGVINGTAPN  284 (355)
Q Consensus       269 ~~~~~---~~~~~~i~~~~  284 (355)
                      +....   .+..+++.+|.
T Consensus       226 ~s~~~~~itG~~i~vdGG~  244 (247)
T 3rwb_A          226 ASDDARWITGQTLNVDAGM  244 (247)
T ss_dssp             HSGGGTTCCSCEEEESTTS
T ss_pred             hCccccCCCCCEEEECCCc
Confidence            97643   45588887764

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}

Probab=99.80  E-value=3.1e-19  Score=154.46  Aligned_cols=223  Identities=12%  Similarity=0.052  Sum_probs=148.6

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCch-hhcc----CCCCCCccCCCeeecCCcchhhhcC-------
Q 018503           48 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSK-AELI----FPGKKTRFFPGVMIAEEPQWRDCIQ-------  115 (355)
Q Consensus        48 ~~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~-~~~~----~~~~~~~~~~~~d~~~~~~~~~~~~-------  115 (355)
                      ..+++++||||+|+||++++++|+++|++|++++|.... ....    ...........+|+.|.+++.++++       
T Consensus        23 ~~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g  102 (269)
T 3gk3_A           23 QAKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDAGRDFKAYAVDVADFESCERCAEKVLADFG  102 (269)
T ss_dssp             -CCCEEEETTTTSHHHHHHHHHHHTTTCEEEEEECSCHHHHHHHHHHHHTTTCCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             hcCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            345689999999999999999999999999999854432 2111    1111111134578889888776664       


Q ss_pred             CCcEEEECCCCCCCC---CCChhhHHHHHHHhhhhHHHHHHHHHcC--CCCCCcEEEEeeeeeeeeCCCCCccccCCCCC
Q 018503          116 GSTAVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPS  190 (355)
Q Consensus       116 ~~d~vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~  190 (355)
                      ++|++||+||.....   ....+.+...+++|+.++.++++++...  ..+..++|++||...  +..         .+.
T Consensus       103 ~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~--~~~---------~~~  171 (269)
T 3gk3_A          103 KVDVLINNAGITRDATFMKMTKGDWDAVMRTDLDAMFNVTKQFIAGMVERRFGRIVNIGSVNG--SRG---------AFG  171 (269)
T ss_dssp             CCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHH--HHC---------CTT
T ss_pred             CCCEEEECCCcCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEeCChhh--ccC---------CCC
Confidence            799999999975332   3356777889999999999888876421  034578999999765  321         123


Q ss_pred             CChh-HHHHHHHHHHHHhccC---CCCeEEEEEecEEEeCCCCcccchHHHHHHHhCCCCCCCCcceecccHHHHHHHHH
Q 018503          191 GNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIY  266 (355)
Q Consensus       191 ~~~y-~~k~~~~~~~~~~~~~---~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~  266 (355)
                      ...| .+|...+.+.+.+..+   .|+++..++||.+..+......   ...   ....+........+...+|+|++++
T Consensus       172 ~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~---~~~---~~~~~~~~~~~~~~~~p~dvA~~v~  245 (269)
T 3gk3_A          172 QANYASAKAGIHGFTKTLALETAKRGITVNTVSPGYLATAMVEAVP---QDV---LEAKILPQIPVGRLGRPDEVAALIA  245 (269)
T ss_dssp             BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTC-------------CCSGGGCTTSSCBCHHHHHHHHH
T ss_pred             cchHHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCcccchhhhhhc---hhH---HHHHhhhcCCcCCccCHHHHHHHHH
Confidence            4567 7787666555544432   4899999999999877533211   000   0001111112234778999999999


Q ss_pred             HHHhCCC---CCCceEecCCCccC
Q 018503          267 EALSNPS---YRGVINGTAPNPVR  287 (355)
Q Consensus       267 ~~~~~~~---~~~~~~i~~~~~~s  287 (355)
                      .++..+.   .+..+++.+|..+|
T Consensus       246 ~L~s~~~~~itG~~i~vdgG~~~s  269 (269)
T 3gk3_A          246 FLCSDDAGFVTGADLAINGGMHMS  269 (269)
T ss_dssp             HHTSTTCTTCCSCEEEESTTSCCC
T ss_pred             HHhCCCcCCeeCcEEEECCCEeCc
Confidence            9998654   35589999887553

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A

Probab=99.80  E-value=1e-19  Score=157.04  Aligned_cols=216  Identities=16%  Similarity=0.123  Sum_probs=144.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCC-CCCccCCCeeecCCcchhhhcC-------CCcEE
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-KKTRFFPGVMIAEEPQWRDCIQ-------GSTAV  120 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~-------~~d~v  120 (355)
                      .+++|+||||+|+||+++++.|+++|++|++++|+.+........ ........+|+.|++++.++++       ++|++
T Consensus        26 ~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l  105 (266)
T 3grp_A           26 TGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADLGKDVFVFSANLSDRKSIKQLAEVAEREMEGIDIL  105 (266)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHHHHHHHTSCCEE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEeecCCHHHHHHHHHHHHHHcCCCCEE
Confidence            457999999999999999999999999999999987664433211 0011134578899888877664       78999


Q ss_pred             EECCCCCCC---CCCChhhHHHHHHHhhhhHHHHHHHH----HcCCCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCCh
Q 018503          121 VNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLI----NESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGND  193 (355)
Q Consensus       121 i~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~----~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~~  193 (355)
                      ||+||....   .....+.+...+++|+.++..+++++    .+  .+..++|++||.... ++          .+....
T Consensus       106 vnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~--~~~g~Iv~isS~~~~-~~----------~~~~~~  172 (266)
T 3grp_A          106 VNNAGITRDGLFVRMQDQDWDDVLAVNLTAASTLTRELIHSMMR--RRYGRIINITSIVGV-VG----------NPGQTN  172 (266)
T ss_dssp             EECCCCC-----CCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHH--HTCEEEEEECCC------------------CHHH
T ss_pred             EECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH--cCCcEEEEECCHHHc-CC----------CCCchh
Confidence            999997532   23345677889999999966666554    33  356799999997662 22          122345


Q ss_pred             h-HHHHHHHHHHHHhccC---CCCeEEEEEecEEEeCCCCcccchHHHHHHHhCCCCCCCCcceecccHHHHHHHHHHHH
Q 018503          194 Y-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEAL  269 (355)
Q Consensus       194 y-~~k~~~~~~~~~~~~~---~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~  269 (355)
                      | .+|...+.+.+.+..+   .|+++..++||.+.++........ .........++      ..+.+.+|+|++++.++
T Consensus       173 Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~-~~~~~~~~~p~------~r~~~~edvA~~v~~L~  245 (266)
T 3grp_A          173 YCAAKAGLIGFSKALAQEIASRNITVNCIAPGFIKSAMTDKLNEK-QKEAIMAMIPM------KRMGIGEEIAFATVYLA  245 (266)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHHTCCHH-HHHHHHTTCTT------CSCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCcCCCchhhccCHH-HHHHHHhcCCC------CCCcCHHHHHHHHHHHh
Confidence            7 7777655555444332   489999999999987632111000 00112222222      34788999999999999


Q ss_pred             hCCC---CCCceEecCCC
Q 018503          270 SNPS---YRGVINGTAPN  284 (355)
Q Consensus       270 ~~~~---~~~~~~i~~~~  284 (355)
                      ....   .+..+++.+|.
T Consensus       246 s~~~~~itG~~i~vdGG~  263 (266)
T 3grp_A          246 SDEAAYLTGQTLHINGGM  263 (266)
T ss_dssp             SGGGTTCCSCEEEESTTC
T ss_pred             CccccCccCCEEEECCCe
Confidence            7543   45588888774

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A

Probab=99.80  E-value=2.2e-19  Score=153.84  Aligned_cols=217  Identities=13%  Similarity=0.075  Sum_probs=144.7

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCC-----CCCccCCCeee--cCCcchhhhcC-----
Q 018503           48 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-----KKTRFFPGVMI--AEEPQWRDCIQ-----  115 (355)
Q Consensus        48 ~~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-----~~~~~~~~~d~--~~~~~~~~~~~-----  115 (355)
                      ..+++++||||+|+||++++++|+++|++|++++|+.+........     ........+|+  .|.+++.++++     
T Consensus        10 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (252)
T 3f1l_A           10 LNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCTSENCQQLAQRIAVN   89 (252)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSCCCEEEECCTTTCCHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCCceEEEEecccCCHHHHHHHHHHHHHh
Confidence            3457999999999999999999999999999999987654332110     00001334677  67776665553     


Q ss_pred             --CCcEEEECCCCCCC----CCCChhhHHHHHHHhhhhHHHHHHHHHcC--CCCCCcEEEEeeeeeeeeCCCCCccccCC
Q 018503          116 --GSTAVVNLAGTPIG----TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDES  187 (355)
Q Consensus       116 --~~d~vi~~a~~~~~----~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~  187 (355)
                        ++|++||+||....    .....+.+...+++|+.++..+++++...  ..+.+++|++||...  +..         
T Consensus        90 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~--~~~---------  158 (252)
T 3f1l_A           90 YPRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNATFMLTQALLPLLLKSDAGSLVFTSSSVG--RQG---------  158 (252)
T ss_dssp             CSCCSEEEECCCCCCCCSCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGG--TSC---------
T ss_pred             CCCCCEEEECCccCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHCCCCEEEEECChhh--ccC---------
Confidence              78999999997421    34456777889999999999999887321  146679999999765  221         


Q ss_pred             CCCCChh-HHHHHHHHHHHHhccCC--CCeEEEEEecEEEeCCCCcccchHHHHHHHhCCCCCCCCcceecccHHHHHHH
Q 018503          188 SPSGNDY-LAEVCREWEGTALKVNK--DVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNL  264 (355)
Q Consensus       188 ~~~~~~y-~~k~~~~~~~~~~~~~~--~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~  264 (355)
                      .+....| .+|...+.+...+..+.  .+++..+.||.+..+.       ..  ....      ......+...+|+|++
T Consensus       159 ~~~~~~Y~asK~a~~~l~~~la~e~~~~irvn~v~PG~v~t~~-------~~--~~~~------~~~~~~~~~p~dva~~  223 (252)
T 3f1l_A          159 RANWGAYAASKFATEGMMQVLADEYQQRLRVNCINPGGTRTAM-------RA--SAFP------TEDPQKLKTPADIMPL  223 (252)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEECCSBSSHH-------HH--HHCT------TCCGGGSBCTGGGHHH
T ss_pred             CCCCchhHHHHHHHHHHHHHHHHHhcCCcEEEEEecCcccCch-------hh--hhCC------ccchhccCCHHHHHHH
Confidence            1234567 77877776665555443  3888889998776531       11  0000      1112346789999999


Q ss_pred             HHHHHhCCC---CCCceEecCCCccCHHH
Q 018503          265 IYEALSNPS---YRGVINGTAPNPVRLAE  290 (355)
Q Consensus       265 ~~~~~~~~~---~~~~~~i~~~~~~s~~e  290 (355)
                      ++.++....   .+..+++.+|...++.|
T Consensus       224 ~~~L~s~~~~~itG~~i~vdgG~~~~~~q  252 (252)
T 3f1l_A          224 YLWLMGDDSRRKTGMTFDAQPGRKPGISQ  252 (252)
T ss_dssp             HHHHHSGGGTTCCSCEEESSCC-------
T ss_pred             HHHHcCccccCCCCCEEEeCCCcCCCCCC
Confidence            999997653   45588898888666543

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*

Probab=99.80  E-value=1.3e-19  Score=155.54  Aligned_cols=210  Identities=11%  Similarity=0.003  Sum_probs=142.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCe-EEEEecCCch--hhccCCC--CCCccCCCeeecCC-cchhhhcC-------
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQ-VRVLTRSRSK--AELIFPG--KKTRFFPGVMIAEE-PQWRDCIQ-------  115 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~-V~~~~r~~~~--~~~~~~~--~~~~~~~~~d~~~~-~~~~~~~~-------  115 (355)
                      ++++|+||||+|+||++++++|+++|++ |++++|+...  ...+...  ........+|+.|+ +++.++++       
T Consensus         4 ~~k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g   83 (254)
T 1sby_A            4 TNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQLK   83 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHHHS
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCCcEEEEEecCchHHHHHHHHHhCCCceEEEEEEecCCChHHHHHHHHHHHHhcC
Confidence            3578999999999999999999999997 9999998742  1111100  00011334788888 77766554       


Q ss_pred             CCcEEEECCCCCCCCCCChhhHHHHHHHhhhhHHHHHHHHHcC-C-CC---CCcEEEEeeeeeeeeCCCCCccccCCCCC
Q 018503          116 GSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINES-P-EG---VRPSVLVSATALGYYGTSETEVFDESSPS  190 (355)
Q Consensus       116 ~~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~-~~---~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~  190 (355)
                      ++|++||+||..     ..+.+...+++|+.++.++++++... . .+   ..++|++||...  +..         .+.
T Consensus        84 ~id~lv~~Ag~~-----~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~--~~~---------~~~  147 (254)
T 1sby_A           84 TVDILINGAGIL-----DDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTG--FNA---------IHQ  147 (254)
T ss_dssp             CCCEEEECCCCC-----CTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGG--TSC---------CTT
T ss_pred             CCCEEEECCccC-----CHHHHhhhheeeehhHHHHHHHHHHHHHHhcCCCCCEEEEECchhh--ccC---------CCC
Confidence            789999999963     34557789999999999999887541 0 11   457999999876  431         123


Q ss_pred             CChh-HHHHHHHHHHHHhccC---CCCeEEEEEecEEEeCCCCcccchH---HHH-HHHhCCCCCCCCcceecccHHHHH
Q 018503          191 GNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMI---PLF-MMFAGGPLGSGQQWFSWIHLDDIV  262 (355)
Q Consensus       191 ~~~y-~~k~~~~~~~~~~~~~---~~~~~~i~Rp~~i~G~~~~~~~~~~---~~~-~~~~~~~~~~~~~~~~~i~v~Dva  262 (355)
                      ...| .+|...+.+.+.+..+   .|+++++++||.+.++.......+.   +.. .....         ..+.+++|+|
T Consensus       148 ~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~dvA  218 (254)
T 1sby_A          148 VPVYSASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPLVHTFNSWLDVEPRVAELLLS---------HPTQTSEQCG  218 (254)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESHHHHSCCCGGGSCTTHHHHHTT---------SCCEEHHHHH
T ss_pred             chHHHHHHHHHHHHHHHHHHHhccCCeEEEEEecCCccCccccccchhhhhhHHHHHHHhc---------CCCCCHHHHH
Confidence            4467 7787766666554443   5899999999999886321110000   000 11111         1345899999


Q ss_pred             HHHHHHHhCCCCCCceEecCC
Q 018503          263 NLIYEALSNPSYRGVINGTAP  283 (355)
Q Consensus       263 ~~~~~~~~~~~~~~~~~i~~~  283 (355)
                      ++++.++.....+..|++.+|
T Consensus       219 ~~i~~~~~~~~~G~~~~v~gG  239 (254)
T 1sby_A          219 QNFVKAIEANKNGAIWKLDLG  239 (254)
T ss_dssp             HHHHHHHHHCCTTCEEEEETT
T ss_pred             HHHHHHHHcCCCCCEEEEeCC
Confidence            999999986555668888887

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*

Probab=99.80  E-value=5.5e-19  Score=153.41  Aligned_cols=219  Identities=13%  Similarity=0.043  Sum_probs=147.6

Q ss_pred             CCCEEEEEcCC--chHHHHHHHHHHhCCCeEEEEecCCc---hhhccCCCCCCccCCCeeecCCcchhhhcC-------C
Q 018503           49 SQMTVSVTGAT--GFIGRRLVQRLQADNHQVRVLTRSRS---KAELIFPGKKTRFFPGVMIAEEPQWRDCIQ-------G  116 (355)
Q Consensus        49 ~~~~IlVtGat--G~iG~~l~~~L~~~g~~V~~~~r~~~---~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-------~  116 (355)
                      .+++|+||||+  |+||+++++.|+++|++|++++|+.+   ....+...........+|+.|.+++.++++       +
T Consensus         5 ~~k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   84 (275)
T 2pd4_A            5 KGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKDLGS   84 (275)
T ss_dssp             TTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTSC
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            35789999999  99999999999999999999999875   111111100001144579999888876664       6


Q ss_pred             CcEEEECCCCCCC-------CCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCCCCccccCCCC
Q 018503          117 STAVVNLAGTPIG-------TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSP  189 (355)
Q Consensus       117 ~d~vi~~a~~~~~-------~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~  189 (355)
                      +|++||+||....       .....+.+...+++|+.++..+++++...-....++|++||...  +..         .+
T Consensus        85 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~--~~~---------~~  153 (275)
T 2pd4_A           85 LDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLSYLGS--TKY---------MA  153 (275)
T ss_dssp             EEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGG--TSB---------CT
T ss_pred             CCEEEECCccCccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEecchh--cCC---------CC
Confidence            8999999997531       14456778899999999999999998772011358999999765  221         12


Q ss_pred             CCChh-HHHHHHHHHHHHhccC---CCCeEEEEEecEEEeCCCCcccchHHHH-HHHhCCCCCCCCcceecccHHHHHHH
Q 018503          190 SGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLF-MMFAGGPLGSGQQWFSWIHLDDIVNL  264 (355)
Q Consensus       190 ~~~~y-~~k~~~~~~~~~~~~~---~~~~~~i~Rp~~i~G~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~v~Dva~~  264 (355)
                      ....| .+|...+.+...+..+   .|++++.++||.+.++............ ......++      ..+.+.+|+|++
T Consensus       154 ~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~------~~~~~p~dva~~  227 (275)
T 2pd4_A          154 HYNVMGLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGIADFRMILKWNEINAPL------RKNVSLEEVGNA  227 (275)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTT------SSCCCHHHHHHH
T ss_pred             CchhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCccccchhhhccccHHHHHHHHhcCCc------CCCCCHHHHHHH
Confidence            34467 7787666665544433   4899999999999887532211111111 11111222      136789999999


Q ss_pred             HHHHHhCCC---CCCceEecCCC
Q 018503          265 IYEALSNPS---YRGVINGTAPN  284 (355)
Q Consensus       265 ~~~~~~~~~---~~~~~~i~~~~  284 (355)
                      ++.++....   .+..+++.++.
T Consensus       228 ~~~l~s~~~~~~tG~~~~vdgg~  250 (275)
T 2pd4_A          228 GMYLLSSLSSGVSGEVHFVDAGY  250 (275)
T ss_dssp             HHHHHSGGGTTCCSCEEEESTTG
T ss_pred             HHHHhCccccCCCCCEEEECCCc
Confidence            999997532   34477777764

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}

Probab=99.80  E-value=4.7e-19  Score=151.69  Aligned_cols=206  Identities=12%  Similarity=0.055  Sum_probs=133.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCC----CCCccCCCeeecCCcchhhhcC------CCc
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG----KKTRFFPGVMIAEEPQWRDCIQ------GST  118 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~----~~~~~~~~~d~~~~~~~~~~~~------~~d  118 (355)
                      .+++++||||+|+||++++++|+++|++|++++|+.+........    ........+|+.|.+++.++++      ++|
T Consensus         6 ~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~g~id   85 (252)
T 3h7a_A            6 RNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGGRIVARSLDARNEDEVTAFLNAADAHAPLE   85 (252)
T ss_dssp             CSCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHSCEE
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECcCCCHHHHHHHHHHHHhhCCce
Confidence            457899999999999999999999999999999988764432211    1111134579999988887775      689


Q ss_pred             EEEECCCCCCC---CCCChhhHHHHHHHhhhhHHHHHHHHHcC--CCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCCh
Q 018503          119 AVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGND  193 (355)
Q Consensus       119 ~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~~  193 (355)
                      ++||+||....   ...+.+.+...+++|+.++..+++++...  ..+..++|++||...  +..         .+....
T Consensus        86 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~--~~~---------~~~~~~  154 (252)
T 3h7a_A           86 VTIFNVGANVNFPILETTDRVFRKVWEMACWAGFVSGRESARLMLAHGQGKIFFTGATAS--LRG---------GSGFAA  154 (252)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGG--TCC---------CTTCHH
T ss_pred             EEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHH--cCC---------CCCCcc
Confidence            99999997533   23456778899999999998888876321  035578999999865  221         123456


Q ss_pred             h-HHHHHHHHHHHHhccC---CCCeE-EEEEecEEEeCCCCcccchHHHHHHHhCCCCCCCCcceecccHHHHHHHHHHH
Q 018503          194 Y-LAEVCREWEGTALKVN---KDVRL-ALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEA  268 (355)
Q Consensus       194 y-~~k~~~~~~~~~~~~~---~~~~~-~i~Rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~  268 (355)
                      | .+|...+.+.+.+..+   .|+++ ..+.||.+..+.....   .+..    ...+....... +...+|+|++++.+
T Consensus       155 Y~asKaa~~~l~~~la~e~~~~gi~v~n~v~PG~v~T~~~~~~---~~~~----~~~~~~~~~~~-~~~pedvA~~~~~l  226 (252)
T 3h7a_A          155 FASAKFGLRAVAQSMARELMPKNIHVAHLIIDSGVDTAWVRER---REQM----FGKDALANPDL-LMPPAAVAGAYWQL  226 (252)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-----------------------------------CCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCCccCChhhhcc---chhh----hhhhhhcCCcc-CCCHHHHHHHHHHH
Confidence            7 7787666655544432   48999 8999999877643211   0000    00011111223 89999999999999


Q ss_pred             HhCCC
Q 018503          269 LSNPS  273 (355)
Q Consensus       269 ~~~~~  273 (355)
                      +..+.
T Consensus       227 ~s~~~  231 (252)
T 3h7a_A          227 YQQPK  231 (252)
T ss_dssp             HHCCG
T ss_pred             HhCch
Confidence            99765

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*

Probab=99.80  E-value=5.4e-19  Score=154.11  Aligned_cols=220  Identities=15%  Similarity=0.006  Sum_probs=147.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchh-hcc----CCCCCCccCCCeeecCCcchhhhc-------CC
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKA-ELI----FPGKKTRFFPGVMIAEEPQWRDCI-------QG  116 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~~----~~~~~~~~~~~~d~~~~~~~~~~~-------~~  116 (355)
                      +.++++||||+|+||++++++|+++|++|++++|+.... ...    ...........+|+.|.+++.+++       .+
T Consensus        28 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~  107 (283)
T 1g0o_A           28 EGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIFGK  107 (283)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHHhCCCeEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            357899999999999999999999999999999987542 111    111111113346888888776655       36


Q ss_pred             CcEEEECCCCCCC---CCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCCh
Q 018503          117 STAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGND  193 (355)
Q Consensus       117 ~d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~~  193 (355)
                      +|++||+||....   .....+.+...+++|+.++.++++++...-.+.+++|++||...  +...        .+....
T Consensus       108 iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~--~~~~--------~~~~~~  177 (283)
T 1g0o_A          108 LDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSITG--QAKA--------VPKHAV  177 (283)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCGGG--TCSS--------CSSCHH
T ss_pred             CCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCeEEEEechhh--ccCC--------CCCCcc
Confidence            8999999997532   12356778889999999999999988762125579999999765  2210        012446


Q ss_pred             h-HHHHHHHHHHHHhcc---CCCCeEEEEEecEEEeCCCCcc-cch--------HHHH-HHHh--CCCCCCCCcceeccc
Q 018503          194 Y-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGAL-AKM--------IPLF-MMFA--GGPLGSGQQWFSWIH  257 (355)
Q Consensus       194 y-~~k~~~~~~~~~~~~---~~~~~~~i~Rp~~i~G~~~~~~-~~~--------~~~~-~~~~--~~~~~~~~~~~~~i~  257 (355)
                      | .+|...+.+.+.+..   ..|+++++++||.+.++..... ..+        .... ....  ..++      ..+.+
T Consensus       178 Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~------~r~~~  251 (283)
T 1g0o_A          178 YSGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPL------RRVGL  251 (283)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGGSTTCTTCCHHHHHHHHHHHSCTT------CSCBC
T ss_pred             hHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccchhhhhhhhhccccccccCHHHHHHHHhhcCCCC------CCCcC
Confidence            7 778766666554443   3489999999999987631110 000        0011 1111  2222      23789


Q ss_pred             HHHHHHHHHHHHhCCC---CCCceEecCCC
Q 018503          258 LDDIVNLIYEALSNPS---YRGVINGTAPN  284 (355)
Q Consensus       258 v~Dva~~~~~~~~~~~---~~~~~~i~~~~  284 (355)
                      .+|+|++++.++....   .+..+++.+|.
T Consensus       252 p~dvA~~v~~l~s~~~~~itG~~i~vdgG~  281 (283)
T 1g0o_A          252 PIDIARVVCFLASNDGGWVTGKVIGIDGGA  281 (283)
T ss_dssp             HHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             HHHHHHHHHHHhCccccCcCCCEEEeCCCc
Confidence            9999999999997543   34578887764

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}

Probab=99.80  E-value=3.7e-19  Score=154.76  Aligned_cols=227  Identities=13%  Similarity=0.052  Sum_probs=149.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCc------------hhhccC----CCCCCccCCCeeecCCcchhh
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRS------------KAELIF----PGKKTRFFPGVMIAEEPQWRD  112 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~------------~~~~~~----~~~~~~~~~~~d~~~~~~~~~  112 (355)
                      ..+++|||||+|+||++++++|+++|++|++++|+..            ......    ..........+|+.|++++.+
T Consensus        12 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~   91 (278)
T 3sx2_A           12 TGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQADVRDRESLSA   91 (278)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHH
Confidence            4579999999999999999999999999999999732            111100    000011134578999988877


Q ss_pred             hcC-------CCcEEEECCCCCCCCCCChhhHHHHHHHhhhhHHHHHHHHHcC--C-CCCCcEEEEeeeeeeeeCCCCCc
Q 018503          113 CIQ-------GSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINES--P-EGVRPSVLVSATALGYYGTSETE  182 (355)
Q Consensus       113 ~~~-------~~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~-~~~~~~v~~Ss~~~~~yg~~~~~  182 (355)
                      +++       ++|++||+||..... ...+.+...+++|+.++..+++++...  + ....++|++||...  +...   
T Consensus        92 ~~~~~~~~~g~id~lv~nAg~~~~~-~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~--~~~~---  165 (278)
T 3sx2_A           92 ALQAGLDELGRLDIVVANAGIAPMS-AGDDGWHDVIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISSSAG--LAGV---  165 (278)
T ss_dssp             HHHHHHHHHCCCCEEEECCCCCCCS-STHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGG--TSCC---
T ss_pred             HHHHHHHHcCCCCEEEECCCCCCCC-CCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccHHh--cCCC---
Confidence            764       789999999975332 256778899999999999999886431  0 22568999999875  3211   


Q ss_pred             cccCCCCCCChh-HHHHHHHHHHHHhcc---CCCCeEEEEEecEEEeCCCCccc--chHHHHHHHhC--CCCCCCCccee
Q 018503          183 VFDESSPSGNDY-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALA--KMIPLFMMFAG--GPLGSGQQWFS  254 (355)
Q Consensus       183 ~~~e~~~~~~~y-~~k~~~~~~~~~~~~---~~~~~~~i~Rp~~i~G~~~~~~~--~~~~~~~~~~~--~~~~~~~~~~~  254 (355)
                        ....+....| .+|...+.+.+.+..   ..|+++..++||.+.++......  ...........  ..+..... ..
T Consensus       166 --~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~  242 (278)
T 3sx2_A          166 --GSADPGSVGYVAAKHGVVGLMRVYANLLAGQMIRVNSIHPSGVETPMINNEFTREWLAKMAAATDTPGAMGNAMP-VE  242 (278)
T ss_dssp             --CCSSHHHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTSSHHHHHHHHHHHHHCC--CTTSCSSS-CS
T ss_pred             --ccCCCCchHhHHHHHHHHHHHHHHHHHHhccCcEEEEEecCCccCccchhhhHHHHHhhccchhhhhhhhhhhcC-cC
Confidence              0011123457 777766665554443   24799999999999988643211  11111111111  11222222 57


Q ss_pred             cccHHHHHHHHHHHHhCCC---CCCceEecCCC
Q 018503          255 WIHLDDIVNLIYEALSNPS---YRGVINGTAPN  284 (355)
Q Consensus       255 ~i~v~Dva~~~~~~~~~~~---~~~~~~i~~~~  284 (355)
                      +++.+|+|++++.++....   .+..+++.+|.
T Consensus       243 ~~~p~dvA~~v~~l~s~~~~~itG~~i~vdGG~  275 (278)
T 3sx2_A          243 VLAPEDVANAVAWLVSDQARYITGVTLPVDAGF  275 (278)
T ss_dssp             SBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTT
T ss_pred             cCCHHHHHHHHHHHhCcccccccCCEEeECCCc
Confidence            8999999999999997543   45588888774

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*

Probab=99.80  E-value=8.7e-19  Score=153.65  Aligned_cols=222  Identities=12%  Similarity=0.019  Sum_probs=153.9

Q ss_pred             CCCEEEEEcCCc--hHHHHHHHHHHhCCCeEEEEecCCchhhccCC---CCCCccCCCeeecCCcchhhhcC-------C
Q 018503           49 SQMTVSVTGATG--FIGRRLVQRLQADNHQVRVLTRSRSKAELIFP---GKKTRFFPGVMIAEEPQWRDCIQ-------G  116 (355)
Q Consensus        49 ~~~~IlVtGatG--~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~---~~~~~~~~~~d~~~~~~~~~~~~-------~  116 (355)
                      .+++++||||+|  +||+++++.|+++|++|++++|+.+.......   .........+|+.|.+++.++++       +
T Consensus        29 ~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  108 (296)
T 3k31_A           29 EGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDPLAESLGVKLTVPCDVSDAESVDNMFKVLAEEWGS  108 (296)
T ss_dssp             TTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            457899999998  99999999999999999999998643221110   00001144579999988877764       6


Q ss_pred             CcEEEECCCCCCC-------CCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCCCCccccCCCC
Q 018503          117 STAVVNLAGTPIG-------TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSP  189 (355)
Q Consensus       117 ~d~vi~~a~~~~~-------~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~  189 (355)
                      +|++|||||....       .....+.+...+++|+.++..+++++...-....++|++||...  +..         .+
T Consensus       109 iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~IV~isS~~~--~~~---------~~  177 (296)
T 3k31_A          109 LDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTNGGSILTLSYYGA--EKV---------VP  177 (296)
T ss_dssp             CSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGG--TSC---------CT
T ss_pred             CCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEEehhh--ccC---------CC
Confidence            8999999997531       24566778899999999999999998763123458999999766  321         23


Q ss_pred             CCChh-HHHHHHHHHHHHhccC---CCCeEEEEEecEEEeCCCCcccchHHHH-HHHhCCCCCCCCcceecccHHHHHHH
Q 018503          190 SGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLF-MMFAGGPLGSGQQWFSWIHLDDIVNL  264 (355)
Q Consensus       190 ~~~~y-~~k~~~~~~~~~~~~~---~~~~~~i~Rp~~i~G~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~v~Dva~~  264 (355)
                      ....| .+|...+.+.+.+..+   .|+++..++||.+..+............ ......++      ..+...+|+|++
T Consensus       178 ~~~~Y~asKaal~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~------~r~~~pedvA~~  251 (296)
T 3k31_A          178 HYNVMGVCKAALEASVKYLAVDLGKQQIRVNAISAGPVRTLASSGISDFHYILTWNKYNSPL------RRNTTLDDVGGA  251 (296)
T ss_dssp             TTTHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCCCCSSCCSCHHHHHHHHHHHHHSTT------SSCCCHHHHHHH
T ss_pred             CchhhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEECCCcCchhhcccchHHHHHHHHhcCCC------CCCCCHHHHHHH
Confidence            34568 7787766665554433   4899999999999987643322211111 11122222      236789999999


Q ss_pred             HHHHHhCCC---CCCceEecCCCccC
Q 018503          265 IYEALSNPS---YRGVINGTAPNPVR  287 (355)
Q Consensus       265 ~~~~~~~~~---~~~~~~i~~~~~~s  287 (355)
                      ++.++....   .+..+++.+|..+.
T Consensus       252 v~fL~s~~a~~itG~~i~vdGG~~~~  277 (296)
T 3k31_A          252 ALYLLSDLGRGTTGETVHVDCGYHVV  277 (296)
T ss_dssp             HHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred             HHHHcCCccCCccCCEEEECCCcccc
Confidence            999998543   45588888886443

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}

Probab=99.80  E-value=5.5e-19  Score=153.28  Aligned_cols=219  Identities=15%  Similarity=0.081  Sum_probs=151.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCC----CCCCccCCCeeecCCcchhhhcC-------CC
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP----GKKTRFFPGVMIAEEPQWRDCIQ-------GS  117 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~~d~~~~~~~~~~~~-------~~  117 (355)
                      ..+++|||||+|+||++++++|+++|++|++++|+.+.......    .........+|+.|.+++.++++       ++
T Consensus        31 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~i  110 (276)
T 3r1i_A           31 SGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGKALPIRCDVTQPDQVRGMLDQMTGELGGI  110 (276)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            45799999999999999999999999999999998766443211    01111134579999988877775       78


Q ss_pred             cEEEECCCCCCC---CCCChhhHHHHHHHhhhhHHHHHHHHHcC--CCC-CCcEEEEeeeeeeeeCCCCCccccCCCCCC
Q 018503          118 TAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEG-VRPSVLVSATALGYYGTSETEVFDESSPSG  191 (355)
Q Consensus       118 d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~-~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~  191 (355)
                      |++||+||....   .....+.++..+++|+.++..+++++...  ..+ ..++|++||...  +...       ..+..
T Consensus       111 D~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~~g~iv~isS~~~--~~~~-------~~~~~  181 (276)
T 3r1i_A          111 DIAVCNAGIVSVQAMLDMPLEEFQRIQDTNVTGVFLTAQAAARAMVDQGLGGTIITTASMSG--HIIN-------IPQQV  181 (276)
T ss_dssp             SEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGG--TSCC-------CSSCC
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEECchHh--cccC-------CCCCc
Confidence            999999997533   23456777888999999999998876441  012 367999998765  2211       01123


Q ss_pred             Chh-HHHHHHHHHHHHhccC---CCCeEEEEEecEEEeCCCCcccchHHHHHHHhCCCCCCCCcceecccHHHHHHHHHH
Q 018503          192 NDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYE  267 (355)
Q Consensus       192 ~~y-~~k~~~~~~~~~~~~~---~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~  267 (355)
                      ..| .+|...+.+.+.+..+   .++++..++||.+..+...........+  ....++      ..+...+|+|++++.
T Consensus       182 ~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~--~~~~p~------~r~~~pedvA~~v~f  253 (276)
T 3r1i_A          182 SHYCTSKAAVVHLTKAMAVELAPHQIRVNSVSPGYIRTELVEPLADYHALW--EPKIPL------GRMGRPEELTGLYLY  253 (276)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTTGGGGGGHHHH--GGGSTT------SSCBCGGGSHHHHHH
T ss_pred             chHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCccccchHHHHHH--HhcCCC------CCCcCHHHHHHHHHH
Confidence            467 7787766666555443   5899999999999887644332222211  122222      237789999999999


Q ss_pred             HHhCCC---CCCceEecCCC
Q 018503          268 ALSNPS---YRGVINGTAPN  284 (355)
Q Consensus       268 ~~~~~~---~~~~~~i~~~~  284 (355)
                      ++....   .+..+++.+|.
T Consensus       254 L~s~~~~~itG~~i~vdGG~  273 (276)
T 3r1i_A          254 LASAASSYMTGSDIVIDGGY  273 (276)
T ss_dssp             HHSGGGTTCCSCEEEESTTT
T ss_pred             HcCccccCccCcEEEECcCc
Confidence            998543   45588887775

>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*

Probab=99.80  E-value=6.4e-19  Score=152.33  Aligned_cols=214  Identities=17%  Similarity=0.137  Sum_probs=146.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCC-chhhccC----CCCCCccCCCeeecCCcchhhhcC-------C
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSR-SKAELIF----PGKKTRFFPGVMIAEEPQWRDCIQ-------G  116 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~-~~~~~~~----~~~~~~~~~~~d~~~~~~~~~~~~-------~  116 (355)
                      ++++|+||||+|+||++++++|+++|++|+++.+.. .......    ..........+|+.|.+++.++++       .
T Consensus        25 ~~k~vlVTGas~gIG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~  104 (267)
T 4iiu_A           25 MSRSVLVTGASKGIGRAIARQLAADGFNIGVHYHRDAAGAQETLNAIVANGGNGRLLSFDVANREQCREVLEHEIAQHGA  104 (267)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHCC
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence            457899999999999999999999999997766443 3322111    111111134578889888877664       7


Q ss_pred             CcEEEECCCCCCC---CCCChhhHHHHHHHhhhhHHHHHHHHH-----cCCCCCCcEEEEeeeeeeeeCCCCCccccCCC
Q 018503          117 STAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLIN-----ESPEGVRPSVLVSATALGYYGTSETEVFDESS  188 (355)
Q Consensus       117 ~d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~~-----~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~  188 (355)
                      +|++||+||....   .....+.+...+++|+.++.++++++.     +  .+..++|++||.... ++          .
T Consensus       105 id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~--~~~g~iv~isS~~~~-~~----------~  171 (267)
T 4iiu_A          105 WYGVVSNAGIARDAAFPALSNDDWDAVIHTNLDSFYNVIQPCIMPMIGA--RQGGRIITLSSVSGV-MG----------N  171 (267)
T ss_dssp             CSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TSCEEEEEECCHHHH-HC----------C
T ss_pred             ccEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc--CCCcEEEEEcchHhc-cC----------C
Confidence            8999999997543   234567788999999999999988763     3  356789999997662 22          1


Q ss_pred             CCCChh-HHHHHHHHHHHHhccC---CCCeEEEEEecEEEeCCCCcccchHHHHHHHhCCCCCCCCcceecccHHHHHHH
Q 018503          189 PSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNL  264 (355)
Q Consensus       189 ~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~  264 (355)
                      +....| .+|...+.+.+.+..+   .|+++..++||.+.++..........  ......+.      ..+...+|+|++
T Consensus       172 ~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~--~~~~~~p~------~~~~~~edva~~  243 (267)
T 4iiu_A          172 RGQVNYSAAKAGIIGATKALAIELAKRKITVNCIAPGLIDTGMIEMEESALK--EAMSMIPM------KRMGQAEEVAGL  243 (267)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCCCHHHHH--HHHHTCTT------CSCBCHHHHHHH
T ss_pred             CCCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEEeeecCCcccccHHHHH--HHHhcCCC------CCCcCHHHHHHH
Confidence            234567 7777555544443332   48999999999998876433211111  22222222      247889999999


Q ss_pred             HHHHHhCCC---CCCceEecCC
Q 018503          265 IYEALSNPS---YRGVINGTAP  283 (355)
Q Consensus       265 ~~~~~~~~~---~~~~~~i~~~  283 (355)
                      ++.++....   .+..+++.+|
T Consensus       244 ~~~L~s~~~~~itG~~i~vdGG  265 (267)
T 4iiu_A          244 ASYLMSDIAGYVTRQVISINGG  265 (267)
T ss_dssp             HHHHHSGGGTTCCSCEEEESTT
T ss_pred             HHHHhCCcccCccCCEEEeCCC
Confidence            999997543   4557888776

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2

Probab=99.80  E-value=1.8e-19  Score=156.26  Aligned_cols=228  Identities=13%  Similarity=0.055  Sum_probs=153.5

Q ss_pred             CCCEEEEEcCC--chHHHHHHHHHHhCCCeEEEEecCCchhhccC---CCCCCccCCCeeecCCcchhhhcC-------C
Q 018503           49 SQMTVSVTGAT--GFIGRRLVQRLQADNHQVRVLTRSRSKAELIF---PGKKTRFFPGVMIAEEPQWRDCIQ-------G  116 (355)
Q Consensus        49 ~~~~IlVtGat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~---~~~~~~~~~~~d~~~~~~~~~~~~-------~  116 (355)
                      ..++|+||||+  |+||++++++|+++|++|++++|+........   ..........+|+.|.+++.++++       +
T Consensus        13 ~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   92 (271)
T 3ek2_A           13 DGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFGSELVFPCDVADDAQIDALFASLKTHWDS   92 (271)
T ss_dssp             TTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHCSC
T ss_pred             CCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhhHHHHHHHHHHcCCcEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            45799999999  99999999999999999999999854322111   000001245679999988877764       6


Q ss_pred             CcEEEECCCCCCC-------C-CCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCCCCccccCCC
Q 018503          117 STAVVNLAGTPIG-------T-RWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESS  188 (355)
Q Consensus       117 ~d~vi~~a~~~~~-------~-~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~  188 (355)
                      +|++||+||....       . ....+.+...+++|+.++..+++++...-....++|++||...  +..         .
T Consensus        93 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~--~~~---------~  161 (271)
T 3ek2_A           93 LDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLGA--ERA---------I  161 (271)
T ss_dssp             EEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEEEEEEEEEECGGG--TSB---------C
T ss_pred             CCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhccCceEEEEecccc--ccC---------C
Confidence            7999999997532       1 2556778899999999999999998762112458999999766  321         2


Q ss_pred             CCCChh-HHHHHHHHHHHHhcc---CCCCeEEEEEecEEEeCCCCcccchHHHH-HHHhCCCCCCCCcceecccHHHHHH
Q 018503          189 PSGNDY-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALAKMIPLF-MMFAGGPLGSGQQWFSWIHLDDIVN  263 (355)
Q Consensus       189 ~~~~~y-~~k~~~~~~~~~~~~---~~~~~~~i~Rp~~i~G~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~v~Dva~  263 (355)
                      +....| .+|...+.+...+..   ..|+++..++||.+..+........-... ......+.      ..+...+|+|+
T Consensus       162 ~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~------~~~~~pedva~  235 (271)
T 3ek2_A          162 PNYNTMGLAKAALEASVRYLAVSLGAKGVRVNAISAGPIKTLAASGIKSFGKILDFVESNSPL------KRNVTIEQVGN  235 (271)
T ss_dssp             TTTTHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCC-----CCCHHHHHHHHHHHHHSTT------SSCCCHHHHHH
T ss_pred             CCccchhHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccchhhhcccchHHHHHHHHhcCCc------CCCCCHHHHHH
Confidence            334568 778776666555444   34899999999999887543322111111 11122222      23678999999


Q ss_pred             HHHHHHhCCC---CCCceEecCCCccCHHHHHH
Q 018503          264 LIYEALSNPS---YRGVINGTAPNPVRLAEMCD  293 (355)
Q Consensus       264 ~~~~~~~~~~---~~~~~~i~~~~~~s~~el~~  293 (355)
                      +++.++....   .+..+++.+|..+++.++.+
T Consensus       236 ~i~~l~s~~~~~~tG~~i~vdgG~~~~~~~~~~  268 (271)
T 3ek2_A          236 AGAFLLSDLASGVTAEVMHVDSGFNAVVGGMAG  268 (271)
T ss_dssp             HHHHHHSGGGTTCCSEEEEESTTGGGBCCCC--
T ss_pred             HHHHHcCcccCCeeeeEEEECCCeeeehhhhhh
Confidence            9999998533   45589999998777666543

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*

Probab=99.80  E-value=1.9e-18  Score=149.29  Aligned_cols=220  Identities=9%  Similarity=0.015  Sum_probs=150.6

Q ss_pred             CCCEEEEEcCCch--HHHHHHHHHHhCCCeEEEEecCCchhhccC---CCC-C-CccCCCeeecCCcchhhhcC------
Q 018503           49 SQMTVSVTGATGF--IGRRLVQRLQADNHQVRVLTRSRSKAELIF---PGK-K-TRFFPGVMIAEEPQWRDCIQ------  115 (355)
Q Consensus        49 ~~~~IlVtGatG~--iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~---~~~-~-~~~~~~~d~~~~~~~~~~~~------  115 (355)
                      .+++++||||+|+  ||++++++|+++|++|++++|+........   ... . ......+|+.|.+++.++++      
T Consensus         6 ~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   85 (266)
T 3oig_A            6 EGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTNDAEIETCFASIKEQV   85 (266)
T ss_dssp             TTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSSSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCCHHHHHHHHHHHHHHh
Confidence            4578999999998  999999999999999999999864322111   100 0 11134579999998877664      


Q ss_pred             -CCcEEEECCCCCCC-------CCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCCCCccccCC
Q 018503          116 -GSTAVVNLAGTPIG-------TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDES  187 (355)
Q Consensus       116 -~~d~vi~~a~~~~~-------~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~  187 (355)
                       .+|++||+||....       .....+.....+++|+.++..+++++...-....++|++||...  +..         
T Consensus        86 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~--~~~---------  154 (266)
T 3oig_A           86 GVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEGGSIVTLTYLGG--ELV---------  154 (266)
T ss_dssp             SCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGG--TSC---------
T ss_pred             CCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCCceEEEEecccc--ccc---------
Confidence             68999999997531       23456667889999999999999998763123458999999766  321         


Q ss_pred             CCCCChh-HHHHHHHHHHHHhccC---CCCeEEEEEecEEEeCCCCcccchHHHH-HHHhCCCCCCCCcceecccHHHHH
Q 018503          188 SPSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLF-MMFAGGPLGSGQQWFSWIHLDDIV  262 (355)
Q Consensus       188 ~~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~i~Rp~~i~G~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~v~Dva  262 (355)
                      .+....| .+|...+.+.+.+..+   .|+++..++||.+..+............ ......+.      ..+...+|+|
T Consensus       155 ~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~------~~~~~p~dva  228 (266)
T 3oig_A          155 MPNYNVMGVAKASLDASVKYLAADLGKENIRVNSISAGPIRTLSAKGISDFNSILKDIEERAPL------RRTTTPEEVG  228 (266)
T ss_dssp             CTTTHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTCTTHHHHHHHHHHHSTT------SSCCCHHHHH
T ss_pred             CCCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccccccccccchHHHHHHHHhcCCC------CCCCCHHHHH
Confidence            2234567 7787666665544432   4899999999999886433221111111 11121222      2368899999


Q ss_pred             HHHHHHHhCCC---CCCceEecCCCc
Q 018503          263 NLIYEALSNPS---YRGVINGTAPNP  285 (355)
Q Consensus       263 ~~~~~~~~~~~---~~~~~~i~~~~~  285 (355)
                      ++++.++....   .+..+++.+|..
T Consensus       229 ~~v~~l~s~~~~~~tG~~i~vdGG~~  254 (266)
T 3oig_A          229 DTAAFLFSDMSRGITGENLHVDSGFH  254 (266)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             HHHHHHcCCchhcCcCCEEEECCCeE
Confidence            99999998543   455888887753

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*

Probab=99.80  E-value=5e-19  Score=154.90  Aligned_cols=222  Identities=11%  Similarity=0.022  Sum_probs=149.4

Q ss_pred             CCCCEEEEEcCCch--HHHHHHHHHHhCCCeEEEEecCCchhhcc---CCCCCCccCCCeeecCCcchhhhcC-------
Q 018503           48 ASQMTVSVTGATGF--IGRRLVQRLQADNHQVRVLTRSRSKAELI---FPGKKTRFFPGVMIAEEPQWRDCIQ-------  115 (355)
Q Consensus        48 ~~~~~IlVtGatG~--iG~~l~~~L~~~g~~V~~~~r~~~~~~~~---~~~~~~~~~~~~d~~~~~~~~~~~~-------  115 (355)
                      ..+++++||||+|+  ||+++++.|++.|++|++++|+.......   ...........+|+.|.+++.++++       
T Consensus        29 l~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  108 (293)
T 3grk_A           29 LQGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDALKKRVEPLAEELGAFVAGHCDVADAASIDAVFETLEKKWG  108 (293)
T ss_dssp             TTTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHHHHHHTCEEEEECCTTCHHHHHHHHHHHHHHTS
T ss_pred             CCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHHhcC
Confidence            44579999999988  99999999999999999999985322111   0000001134579999888877664       


Q ss_pred             CCcEEEECCCCCCC-------CCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCCCCccccCCC
Q 018503          116 GSTAVVNLAGTPIG-------TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESS  188 (355)
Q Consensus       116 ~~d~vi~~a~~~~~-------~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~  188 (355)
                      ++|++|||||....       .....+.+...+++|+.++..+++++...-....++|++||...  +..         .
T Consensus       109 ~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~isS~~~--~~~---------~  177 (293)
T 3grk_A          109 KLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADGGSILTLTYYGA--EKV---------M  177 (293)
T ss_dssp             CCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTCEEEEEEECGGG--TSB---------C
T ss_pred             CCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEeehhh--ccC---------C
Confidence            68999999997531       24456778899999999999999988652123468999999776  321         2


Q ss_pred             CCCChh-HHHHHHHHHHHHhccC---CCCeEEEEEecEEEeCCCCcccchHHHH-HHHhCCCCCCCCcceecccHHHHHH
Q 018503          189 PSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLF-MMFAGGPLGSGQQWFSWIHLDDIVN  263 (355)
Q Consensus       189 ~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~i~Rp~~i~G~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~v~Dva~  263 (355)
                      +....| .+|...+.+.+.+..+   .|+++..++||.+..+............ ......++      ..+...+|+|+
T Consensus       178 ~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~------~r~~~pedvA~  251 (293)
T 3grk_A          178 PNYNVMGVAKAALEASVKYLAVDLGPQNIRVNAISAGPIKTLAASGIGDFRYILKWNEYNAPL------RRTVTIDEVGD  251 (293)
T ss_dssp             TTTTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC------CCHHHHHHHHHHHSTT------SSCCCHHHHHH
T ss_pred             CchHHHHHHHHHHHHHHHHHHHHHhHhCCEEEEEecCCCcchhhhcccchHHHHHHHHhcCCC------CCCCCHHHHHH
Confidence            234568 7887766665554433   4899999999999887533221111111 11122222      23678999999


Q ss_pred             HHHHHHhCCC---CCCceEecCCCcc
Q 018503          264 LIYEALSNPS---YRGVINGTAPNPV  286 (355)
Q Consensus       264 ~~~~~~~~~~---~~~~~~i~~~~~~  286 (355)
                      +++.++....   .+..+++.+|..+
T Consensus       252 ~v~~L~s~~~~~itG~~i~vdGG~~~  277 (293)
T 3grk_A          252 VGLYFLSDLSRSVTGEVHHADSGYHV  277 (293)
T ss_dssp             HHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             HHHHHcCccccCCcceEEEECCCccc
Confidence            9999998543   4558888887543

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}

Probab=99.80  E-value=2.4e-19  Score=158.72  Aligned_cols=222  Identities=13%  Similarity=0.103  Sum_probs=148.1

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchh------------hcc----CCCCCCccCCCeeecCCcchh
Q 018503           48 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKA------------ELI----FPGKKTRFFPGVMIAEEPQWR  111 (355)
Q Consensus        48 ~~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~------------~~~----~~~~~~~~~~~~d~~~~~~~~  111 (355)
                      ..++++|||||+|+||+++++.|+++|++|++++|+....            ...    ...........+|+.|++++.
T Consensus        44 l~gk~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~  123 (317)
T 3oec_A           44 LQGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQADVRDLASLQ  123 (317)
T ss_dssp             TTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHH
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHH
Confidence            3457999999999999999999999999999998863211            100    000111113357888988887


Q ss_pred             hhcC-------CCcEEEECCCCCCC---CCCChhhHHHHHHHhhhhHHHHHHHHHcC---CCCCCcEEEEeeeeeeeeCC
Q 018503          112 DCIQ-------GSTAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES---PEGVRPSVLVSATALGYYGT  178 (355)
Q Consensus       112 ~~~~-------~~d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~~~~---~~~~~~~v~~Ss~~~~~yg~  178 (355)
                      ++++       ++|++||+||....   ...+.+.+...+++|+.++..+++++...   .....++|++||...  +..
T Consensus       124 ~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~g~Iv~isS~~~--~~~  201 (317)
T 3oec_A          124 AVVDEALAEFGHIDILVSNVGISNQGEVVSLTDQQWSDILQTNLIGAWHACRAVLPSMIERGQGGSVIFVSSTVG--LRG  201 (317)
T ss_dssp             HHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTCSCEEEEEECCGGG--SSC
T ss_pred             HHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCCEEEEECcHHh--cCC
Confidence            7664       78999999997533   24456778899999999999988877431   022467999999876  321


Q ss_pred             CCCccccCCCCCCChh-HHHHHHHHHHHHhccC---CCCeEEEEEecEEEeCCCCcccchHHH-------------HHHH
Q 018503          179 SETEVFDESSPSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPL-------------FMMF  241 (355)
Q Consensus       179 ~~~~~~~e~~~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~i~Rp~~i~G~~~~~~~~~~~~-------------~~~~  241 (355)
                               .+....| .+|...+.+...+..+   .|+++..++||.+.++..... .....             ....
T Consensus       202 ---------~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~-~~~~~~~~~~~~~~~~~~~~~~  271 (317)
T 3oec_A          202 ---------APGQSHYAASKHGVQGLMLSLANEVGRHNIRVNSVNPGAVNTEMALNE-KLLKMFLPHLENPTREDAAELF  271 (317)
T ss_dssp             ---------CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHCH-HHHHHHCTTCSSCCHHHHHHHH
T ss_pred             ---------CCCCcchHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCccccch-hhhhhhhhhccccchhHHHHHH
Confidence                     1233567 7787766666555443   489999999999987632100 00000             0000


Q ss_pred             hCCCCCCCCcceecccHHHHHHHHHHHHhCCC---CCCceEecCCCc
Q 018503          242 AGGPLGSGQQWFSWIHLDDIVNLIYEALSNPS---YRGVINGTAPNP  285 (355)
Q Consensus       242 ~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~---~~~~~~i~~~~~  285 (355)
                      ..    .......+++.+|+|++++.++....   .+..+++.+|..
T Consensus       272 ~~----~~~~p~~~~~pedvA~av~fL~s~~a~~itG~~i~vdGG~~  314 (317)
T 3oec_A          272 SQ----LTLLPIPWVEPEDVSNAVAWLASDEARYIHGAAIPVDGGQL  314 (317)
T ss_dssp             TT----TCSSSSSSBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGG
T ss_pred             hh----hccCCCCCCCHHHHHHHHHHHcCCcccCCCCCEEEECcchh
Confidence            00    01112568899999999999997543   455888888753

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.80  E-value=2.8e-19  Score=155.64  Aligned_cols=224  Identities=17%  Similarity=0.104  Sum_probs=149.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccC----CCCC---CccCCCeeecCCcchhhhcC------
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIF----PGKK---TRFFPGVMIAEEPQWRDCIQ------  115 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~~~~---~~~~~~~d~~~~~~~~~~~~------  115 (355)
                      ++++++||||+|+||++++++|+++|++|++++|+.+......    ....   ......+|+.|++++.++++      
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   84 (280)
T 1xkq_A            5 SNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQF   84 (280)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecCCCHHHHHHHHHHHHHhc
Confidence            4578999999999999999999999999999999876543221    1000   01134578889888777664      


Q ss_pred             -CCcEEEECCCCCCC-------CCCChhhHHHHHHHhhhhHHHHHHHHHcC--CCCCCcEEEEeeeeeeeeCCCCCcccc
Q 018503          116 -GSTAVVNLAGTPIG-------TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFD  185 (355)
Q Consensus       116 -~~d~vi~~a~~~~~-------~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~~~~v~~Ss~~~~~yg~~~~~~~~  185 (355)
                       ++|++||+||....       .....+.+...+++|+.++.++++++...  ..+ +++|++||...  +...      
T Consensus        85 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~--~~~~------  155 (280)
T 1xkq_A           85 GKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASK-GEIVNVSSIVA--GPQA------  155 (280)
T ss_dssp             SCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGG--SSSC------
T ss_pred             CCCCEEEECCCCCCCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHhhcCC-CcEEEecCccc--cCCC------
Confidence             68999999997532       13355677889999999999998887541  023 78999999866  3211      


Q ss_pred             CCCCCCChh-HHHHHHHHHHHHhcc---CCCCeEEEEEecEEEeCCCCcc---cchH-HHHHHHhCCCCCCCCcceeccc
Q 018503          186 ESSPSGNDY-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGAL---AKMI-PLFMMFAGGPLGSGQQWFSWIH  257 (355)
Q Consensus       186 e~~~~~~~y-~~k~~~~~~~~~~~~---~~~~~~~i~Rp~~i~G~~~~~~---~~~~-~~~~~~~~~~~~~~~~~~~~i~  257 (355)
                        .+....| .+|...+.+.+.+..   ..|++++.++||.+.++.....   .... ........  +........+.+
T Consensus       156 --~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~--~~~~~p~~~~~~  231 (280)
T 1xkq_A          156 --QPDFLYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMAS--HKECIPIGAAGK  231 (280)
T ss_dssp             --CCSSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHH--CTTTCTTSSCBC
T ss_pred             --CCcccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEeeCcCcCCcccccccccccccchHHHHHH--HHcCCCCCCCCC
Confidence              1234467 778766666555443   3589999999999988742111   0000 00000000  000111234789


Q ss_pred             HHHHHHHHHHHHhCC-C---CCCceEecCCCc
Q 018503          258 LDDIVNLIYEALSNP-S---YRGVINGTAPNP  285 (355)
Q Consensus       258 v~Dva~~~~~~~~~~-~---~~~~~~i~~~~~  285 (355)
                      .+|+|++++.++..+ .   .+..+++.+|..
T Consensus       232 pedvA~~v~~l~s~~~~~~~tG~~i~vdgG~~  263 (280)
T 1xkq_A          232 PEHIANIILFLADRNLSFYILGQSIVADGGTS  263 (280)
T ss_dssp             HHHHHHHHHHHHCHHHHTTCCSCEEEESTTGG
T ss_pred             HHHHHHHHHHhcCcccccCccCCeEEECCCcc
Confidence            999999999998754 1   455888887753

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}

Probab=99.80  E-value=4.1e-19  Score=155.48  Aligned_cols=224  Identities=14%  Similarity=0.026  Sum_probs=146.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCC-CCccCCCeeecCCcchhhhcC---CCcEEEECC
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGK-KTRFFPGVMIAEEPQWRDCIQ---GSTAVVNLA  124 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~~---~~d~vi~~a  124 (355)
                      .+++|+||||+|+||++++++|+++|++|++++|+.++........ .......+|+.|.+++.++++   ++|++||+|
T Consensus        15 ~gk~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~iD~lv~nA   94 (291)
T 3rd5_A           15 AQRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTMAGQVEVRELDLQDLSSVRRFADGVSGADVLINNA   94 (291)
T ss_dssp             TTCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTSSSEEEEEECCTTCHHHHHHHHHTCCCEEEEEECC
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCeeEEEcCCCCHHHHHHHHHhcCCCCEEEECC
Confidence            4579999999999999999999999999999999987655433221 111134578889998888876   579999999


Q ss_pred             CCCCC-CCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCC-CCccccCC-C--CCCChh-HHHH
Q 018503          125 GTPIG-TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTS-ETEVFDES-S--PSGNDY-LAEV  198 (355)
Q Consensus       125 ~~~~~-~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~-~~~~~~e~-~--~~~~~y-~~k~  198 (355)
                      |.... .....+.++..+++|+.++.++++++..  ...+++|++||...  +... ......+. .  ++...| .+|.
T Consensus        95 g~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~--~~~~riv~isS~~~--~~~~~~~~~~~~~~~~~~~~~~Y~~sK~  170 (291)
T 3rd5_A           95 GIMAVPYALTVDGFESQIGTNHLGHFALTNLLLP--RLTDRVVTVSSMAH--WPGRINLEDLNWRSRRYSPWLAYSQSKL  170 (291)
T ss_dssp             CCCSCCCCBCTTSCBHHHHHHTHHHHHHHHHHGG--GEEEEEEEECCGGG--TTCCCCSSCTTCSSSCCCHHHHHHHHHH
T ss_pred             cCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHH--HHHhheeEeechhh--ccCCCCcccccccccCCCCcchHHHHHH
Confidence            97532 2234566678999999999999999988  45669999999876  4321 11111111 1  122357 7777


Q ss_pred             HHHHHHHHhccC---CC--CeEEEEEecEEEeCCCCcccchHHHHHHHhCCCCCCCCcceecccHHHHHHHHHHHHhCCC
Q 018503          199 CREWEGTALKVN---KD--VRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPS  273 (355)
Q Consensus       199 ~~~~~~~~~~~~---~~--~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~  273 (355)
                      ..+.+...+..+   .+  ++++.++||.+..+.........  ......     ....+-....+|+|++++.++..+.
T Consensus       171 a~~~~~~~la~e~~~~g~~i~v~~v~PG~v~T~~~~~~~~~~--~~~~~~-----~~~~~~~~~~~~~A~~~~~l~~~~~  243 (291)
T 3rd5_A          171 ANLLFTSELQRRLTAAGSPLRALAAHPGYSHTNLQGASGRKL--GDALMS-----AATRVVATDADFGARQTLYAASQDL  243 (291)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCEEEEECCSGGGSCC---------------------------CHHHHHHHHHHHHHHHSCC
T ss_pred             HHHHHHHHHHHHHhhCCCCEEEEEeeCCCCccccccccchHH--HHHHHH-----HHHHHHhCCHHHHHHHHHHHHcCCC
Confidence            666655544432   24  99999999998766432211000  000000     0111223469999999999999865


Q ss_pred             CCC-ceEecCC
Q 018503          274 YRG-VINGTAP  283 (355)
Q Consensus       274 ~~~-~~~i~~~  283 (355)
                      ..| .+.+.+|
T Consensus       244 ~~G~~~~vdgG  254 (291)
T 3rd5_A          244 PGDSFVGPRFG  254 (291)
T ss_dssp             CTTCEEEETTS
T ss_pred             CCCceeCCccc
Confidence            555 5555443

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2

Probab=99.80  E-value=8.8e-19  Score=151.50  Aligned_cols=210  Identities=13%  Similarity=0.090  Sum_probs=145.3

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHhCC---CeEEEEecCCchhhccCCC---CCCccCCCeeecCCcchhhhcC------
Q 018503           48 ASQMTVSVTGATGFIGRRLVQRLQADN---HQVRVLTRSRSKAELIFPG---KKTRFFPGVMIAEEPQWRDCIQ------  115 (355)
Q Consensus        48 ~~~~~IlVtGatG~iG~~l~~~L~~~g---~~V~~~~r~~~~~~~~~~~---~~~~~~~~~d~~~~~~~~~~~~------  115 (355)
                      .++++|+||||+|+||++++++|++.|   ++|++++|+.+....+...   ........+|+.|.+++.++++      
T Consensus        19 ~~~k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   98 (267)
T 1sny_A           19 SHMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFDAYDKLVADIEGVT   98 (267)
T ss_dssp             -CCSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTCGGGHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecChhhhHHHHHhhccCCceEEEEecCCChHHHHHHHHHHHHhc
Confidence            345789999999999999999999999   9999999987643321100   0001134578899998887775      


Q ss_pred             ---CCcEEEECCCCCC-C---CCCChhhHHHHHHHhhhhHHHHHHHHHcC-C-C------C-----CCcEEEEeeeeeee
Q 018503          116 ---GSTAVVNLAGTPI-G---TRWSSEIKKEIKESRIRVTSKVVDLINES-P-E------G-----VRPSVLVSATALGY  175 (355)
Q Consensus       116 ---~~d~vi~~a~~~~-~---~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~-~------~-----~~~~v~~Ss~~~~~  175 (355)
                         ++|+|||+||... .   .....+.....+++|+.++.++++++... . .      +     .+++|++||...  
T Consensus        99 g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~--  176 (267)
T 1sny_A           99 KDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILG--  176 (267)
T ss_dssp             GGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGGG--
T ss_pred             CCCCccEEEECCCcCCCccccccCCHHHHHHHHhhhchHHHHHHHHHHHHHhhcccccccccccCCCceEEEEecccc--
Confidence               7999999999753 1   23356677889999999999999887541 0 1      1     468999999876  


Q ss_pred             eCCCCCccccCCCCCCChh-HHHHHHHHHHHHhccC---CCCeEEEEEecEEEeCCCCcccchHHHHHHHhCCCCCCCCc
Q 018503          176 YGTSETEVFDESSPSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQ  251 (355)
Q Consensus       176 yg~~~~~~~~e~~~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~  251 (355)
                      +....      ..+....| .+|...+.+...+..+   .++++++++||.+..+....                     
T Consensus       177 ~~~~~------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~---------------------  229 (267)
T 1sny_A          177 SIQGN------TDGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTDMGGS---------------------  229 (267)
T ss_dssp             CSTTC------CSCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCSTTTCT---------------------
T ss_pred             cccCC------CCCCchHHHHHHHHHHHHHHHHHHHhhcCCcEEEEeCCcceecCCCCC---------------------
Confidence            43211      11233457 7787766666554443   58999999999987654211                     


Q ss_pred             ceecccHHHHHHHHHHHHhCCC--CCCceEecCCCccC
Q 018503          252 WFSWIHLDDIVNLIYEALSNPS--YRGVINGTAPNPVR  287 (355)
Q Consensus       252 ~~~~i~v~Dva~~~~~~~~~~~--~~~~~~i~~~~~~s  287 (355)
                       ..++..+|+|+.++.++....  ..|.|...+|..+.
T Consensus       230 -~~~~~~~~~a~~~~~~~~~~~~~~~G~~~~~~g~~~~  266 (267)
T 1sny_A          230 -SAPLDVPTSTGQIVQTISKLGEKQNGGFVNYDGTPLA  266 (267)
T ss_dssp             -TCSBCHHHHHHHHHHHHHHCCGGGTTCEECTTSCBCC
T ss_pred             -CCCCCHHHHHHHHHHHHHhcCcCCCCcEEccCCcCcC
Confidence             125788999999999998643  34555444444443

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}

Probab=99.80  E-value=2e-18  Score=149.39  Aligned_cols=218  Identities=12%  Similarity=0.032  Sum_probs=149.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCch-hhccC----CCCCCccCCCeeecCCcchhhhcC-------C
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSK-AELIF----PGKKTRFFPGVMIAEEPQWRDCIQ-------G  116 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~-~~~~~----~~~~~~~~~~~d~~~~~~~~~~~~-------~  116 (355)
                      .+++++||||+|+||++++++|+++|++|++++++... .....    ..........+|+.|++++.++++       +
T Consensus        30 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  109 (271)
T 3v2g_A           30 AGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGGRAVAIRADNRDAEAIEQAIRETVEALGG  109 (271)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            45789999999999999999999999999999776532 22111    111111134578889888877664       7


Q ss_pred             CcEEEECCCCCCC---CCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCCh
Q 018503          117 STAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGND  193 (355)
Q Consensus       117 ~d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~~  193 (355)
                      +|++||+||....   ...+.+.+...+++|+.++..+++++...-....++|++||.... ++         ..+....
T Consensus       110 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~isS~~~~-~~---------~~~~~~~  179 (271)
T 3v2g_A          110 LDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITIGSNLAE-LV---------PWPGISL  179 (271)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCGGGT-CC---------CSTTCHH
T ss_pred             CcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEeChhhc-cC---------CCCCchH
Confidence            8999999997533   234667788999999999999999886621245689999986541 11         0123456


Q ss_pred             h-HHHHHHHHHHHHhccC---CCCeEEEEEecEEEeCCCCcccchHHHHHHHhCCCCCCCCcceecccHHHHHHHHHHHH
Q 018503          194 Y-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEAL  269 (355)
Q Consensus       194 y-~~k~~~~~~~~~~~~~---~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~  269 (355)
                      | .+|...+.+.+.+..+   .|+++..++||.+.++............  ....+.      ..+...+|+|++++.++
T Consensus       180 Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~--~~~~~~------~r~~~pedvA~~v~fL~  251 (271)
T 3v2g_A          180 YSASKAALAGLTKGLARDLGPRGITVNIVHPGSTDTDMNPADGDHAEAQ--RERIAT------GSYGEPQDIAGLVAWLA  251 (271)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSSSSCSSCSSHHHH--HHTCTT------SSCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCCCcCCcccccchhHHHH--HhcCCC------CCCCCHHHHHHHHHHHh
Confidence            7 7787766665554433   4899999999999987543222222211  122222      23678999999999999


Q ss_pred             hCCC---CCCceEecCCC
Q 018503          270 SNPS---YRGVINGTAPN  284 (355)
Q Consensus       270 ~~~~---~~~~~~i~~~~  284 (355)
                      ....   .+..+++.+|.
T Consensus       252 s~~~~~itG~~i~vdGG~  269 (271)
T 3v2g_A          252 GPQGKFVTGASLTIDGGA  269 (271)
T ss_dssp             SGGGTTCCSCEEEESTTT
T ss_pred             CcccCCccCCEEEeCcCc
Confidence            7543   45588887764

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}

Probab=99.79  E-value=2.1e-19  Score=156.46  Aligned_cols=216  Identities=14%  Similarity=0.039  Sum_probs=145.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCC----CCCccCCCeeecCCcchhhhcC-------CC
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG----KKTRFFPGVMIAEEPQWRDCIQ-------GS  117 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~----~~~~~~~~~d~~~~~~~~~~~~-------~~  117 (355)
                      ++++|+||||+|+||++++++|+++|++|++++|+.+........    ........+|+.|.+++.++++       .+
T Consensus        33 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~i  112 (279)
T 3ctm_A           33 KGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTYGVHSKAYKCNISDPKSVEETISQQEKDFGTI  112 (279)
T ss_dssp             TTCEEEETTTTSSHHHHHHHHHHHHTCEEEEEESSSCCHHHHHHHHHHHCSCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeecCCHHHHHHHHHHHHHHhCCC
Confidence            457899999999999999999999999999999987653322100    0001134578888888877664       48


Q ss_pred             cEEEECCCCCCC-C----CCChhhHHHHHHHhhhh----HHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCCCCccccCCC
Q 018503          118 TAVVNLAGTPIG-T----RWSSEIKKEIKESRIRV----TSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESS  188 (355)
Q Consensus       118 d~vi~~a~~~~~-~----~~~~~~~~~~~~~n~~~----~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~  188 (355)
                      |+|||+||.... .    ....+.+...+++|+.+    ++.+++.+++  .+.+++|++||...  +...       ..
T Consensus       113 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~--~~~~~iv~isS~~~--~~~~-------~~  181 (279)
T 3ctm_A          113 DVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYYCSHNIGKIFKK--NGKGSLIITSSISG--KIVN-------IP  181 (279)
T ss_dssp             SEEEECGGGSTTC--CCCSSHHHHHHHHHHHHTHHHHHHHHHHHHHHHH--HTCCEEEEECCCTT--SCC----------
T ss_pred             CEEEECCcccccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh--cCCCeEEEECchHh--ccCC-------CC
Confidence            999999996432 1    33456667889999999    5566676666  56789999999765  3210       01


Q ss_pred             CCCChh-HHHHHHHHHHHHhccC---CCCeEEEEEecEEEeCCCCccc-chHHHHHHHhCCCCCCCCcceecccHHHHHH
Q 018503          189 PSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALA-KMIPLFMMFAGGPLGSGQQWFSWIHLDDIVN  263 (355)
Q Consensus       189 ~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~i~Rp~~i~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~  263 (355)
                      +....| .+|...+.+...+..+   .+ ++++++|+.+.++...... ....  ......+.      ..+++.+|+|+
T Consensus       182 ~~~~~Y~~sK~a~~~~~~~la~e~~~~~-~v~~v~Pg~v~t~~~~~~~~~~~~--~~~~~~p~------~~~~~~~dvA~  252 (279)
T 3ctm_A          182 QLQAPYNTAKAACTHLAKSLAIEWAPFA-RVNTISPGYIDTDITDFASKDMKA--KWWQLTPL------GREGLTQELVG  252 (279)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHTTTTC-EEEEEEECSBSSTTTSSCCHHHHH--HHHHHSTT------CSCBCGGGTHH
T ss_pred             CCcccHHHHHHHHHHHHHHHHHHhcccC-CEEEEeccCCccccccccChHHHH--HHHHhCCc------cCCcCHHHHHH
Confidence            223457 7787777666655443   36 9999999999877532211 1111  11111121      24789999999


Q ss_pred             HHHHHHhCCC---CCCceEecCCC
Q 018503          264 LIYEALSNPS---YRGVINGTAPN  284 (355)
Q Consensus       264 ~~~~~~~~~~---~~~~~~i~~~~  284 (355)
                      +++.++..+.   .+..+++.+|.
T Consensus       253 ~~~~l~s~~~~~~tG~~i~vdgG~  276 (279)
T 3ctm_A          253 GYLYLASNASTFTTGSDVVIDGGY  276 (279)
T ss_dssp             HHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             HHHHHhCccccCccCCEEEECCCe
Confidence            9999997542   34588888875

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}

Probab=99.79  E-value=5.2e-19  Score=151.41  Aligned_cols=211  Identities=18%  Similarity=0.128  Sum_probs=142.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcC-------CCcEEE
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ-------GSTAVV  121 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-------~~d~vi  121 (355)
                      ++++|+||||+|+||++++++|+++|++|++++|+.+....    .   ....+|+.|++++.++++       .+|++|
T Consensus        20 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~----~---~~~~~Dl~d~~~v~~~~~~~~~~~g~iD~lv   92 (253)
T 2nm0_A           20 MSRSVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEPPEG----F---LAVKCDITDTEQVEQAYKEIEETHGPVEVLI   92 (253)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSCCCTT----S---EEEECCTTSHHHHHHHHHHHHHHTCSCSEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHhhcc----c---eEEEecCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            35789999999999999999999999999999998754332    1   144579999888776664       479999


Q ss_pred             ECCCCCCC---CCCChhhHHHHHHHhhhhHHHHHHHHHcC--CCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCChh-H
Q 018503          122 NLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-L  195 (355)
Q Consensus       122 ~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~~y-~  195 (355)
                      |+||....   .....+.+...+++|+.++.++++++...  ..+.+++|++||...  +..         .+....| .
T Consensus        93 ~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~--~~~---------~~~~~~Y~a  161 (253)
T 2nm0_A           93 ANAGVTKDQLLMRMSEEDFTSVVETNLTGTFRVVKRANRAMLRAKKGRVVLISSVVG--LLG---------SAGQANYAA  161 (253)
T ss_dssp             EECSCCTTTC---CCTTTTHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCCCC--CCC---------HHHHHHHHH
T ss_pred             ECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECchhh--CCC---------CCCcHHHHH
Confidence            99997532   12355667889999999999888866431  135679999999765  221         0112356 6


Q ss_pred             HHHHHHHHHHHhcc---CCCCeEEEEEecEEEeCCCCccc-chHHHHHHHhCCCCCCCCcceecccHHHHHHHHHHHHhC
Q 018503          196 AEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALA-KMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSN  271 (355)
Q Consensus       196 ~k~~~~~~~~~~~~---~~~~~~~i~Rp~~i~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~  271 (355)
                      +|...+.+.+.+..   ..++++++++||.+..+...... ....  ......+.      ..++..+|+|++++.++..
T Consensus       162 sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~--~~~~~~p~------~~~~~p~dvA~~i~~l~s~  233 (253)
T 2nm0_A          162 SKAGLVGFARSLARELGSRNITFNVVAPGFVDTDMTKVLTDEQRA--NIVSQVPL------GRYARPEEIAATVRFLASD  233 (253)
T ss_dssp             HHHHHHHHHHHHHHHHCSSSEEEEEEEECSBCC---------CHH--HHHTTCTT------CSCBCHHHHHHHHHHHHSG
T ss_pred             HHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhhcCHHHHH--HHHhcCCC------CCCcCHHHHHHHHHHHhCc
Confidence            77665555544332   35899999999988766422110 0111  11111121      2478999999999999976


Q ss_pred             CC---CCCceEecCCCc
Q 018503          272 PS---YRGVINGTAPNP  285 (355)
Q Consensus       272 ~~---~~~~~~i~~~~~  285 (355)
                      +.   .+..+.+.+|..
T Consensus       234 ~~~~~tG~~i~vdGG~~  250 (253)
T 2nm0_A          234 DASYITGAVIPVDGGLG  250 (253)
T ss_dssp             GGTTCCSCEEEESTTTT
T ss_pred             cccCCcCcEEEECCccc
Confidence            43   345788877753

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*

Probab=99.79  E-value=1.8e-18  Score=146.65  Aligned_cols=198  Identities=19%  Similarity=0.170  Sum_probs=139.4

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCC-----CCCccCCCeeecCCcchhhhcC-------CC
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-----KKTRFFPGVMIAEEPQWRDCIQ-------GS  117 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-----~~~~~~~~~d~~~~~~~~~~~~-------~~  117 (355)
                      +++++||||+|+||++++++|+++|++|++++|+.+........     ........+|+.|++++.++++       ++
T Consensus         2 ~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i   81 (235)
T 3l77_A            2 MKVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVEVFYHHLDVSKAESVEEFSKKVLERFGDV   81 (235)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHCC-HHHHHSSC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCeEEEEEeccCCHHHHHHHHHHHHHhcCCC
Confidence            46899999999999999999999999999999987654322110     0111134578999998888775       68


Q ss_pred             cEEEECCCCCCC---CCCChhhHHHHHHHhhhhHHHHHHHHHcC-CCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCCh
Q 018503          118 TAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES-PEGVRPSVLVSATALGYYGTSETEVFDESSPSGND  193 (355)
Q Consensus       118 d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~~  193 (355)
                      |++||+||....   ...+.+.+...+++|+.++.++++++... ..+..++|++||+... ++          .+....
T Consensus        82 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~ii~~sS~~~~-~~----------~~~~~~  150 (235)
T 3l77_A           82 DVVVANAGLGYFKRLEELSEEEFHEMIEVNLLGVWRTLKAFLDSLKRTGGLALVTTSDVSA-RL----------IPYGGG  150 (235)
T ss_dssp             SEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGS-SC----------CTTCHH
T ss_pred             CEEEECCccccccCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEEecchhc-cc----------CCCcch
Confidence            999999997533   23366778899999999999998887431 0134567777776541 21          122346


Q ss_pred             h-HHHHHHHHHHHHhcc-CCCCeEEEEEecEEEeCCCCcccchHHHHHHHhCCCCCCCCcceecccHHHHHHHHHHHHhC
Q 018503          194 Y-LAEVCREWEGTALKV-NKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSN  271 (355)
Q Consensus       194 y-~~k~~~~~~~~~~~~-~~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~  271 (355)
                      | .+|...+.+...+.. ..++++..++||.+..+.......               ......++..+|+|++++.++..
T Consensus       151 Y~~sKaa~~~~~~~l~~~~~~i~v~~v~PG~v~T~~~~~~~~---------------~~~~~~~~~p~dva~~v~~l~~~  215 (235)
T 3l77_A          151 YVSTKWAARALVRTFQIENPDVRFFELRPGAVDTYFGGSKPG---------------KPKEKGYLKPDEIAEAVRCLLKL  215 (235)
T ss_dssp             HHHHHHHHHHHHHHHHHHCTTSEEEEEEECSBSSSTTTCCSC---------------CCGGGTCBCHHHHHHHHHHHHTS
T ss_pred             HHHHHHHHHHHHHHHhhcCCCeEEEEEeCCccccccccccCC---------------cccccCCCCHHHHHHHHHHHHcC
Confidence            7 778776666555433 348999999999987654221100               11112578999999999999998


Q ss_pred             CC
Q 018503          272 PS  273 (355)
Q Consensus       272 ~~  273 (355)
                      +.
T Consensus       216 ~~  217 (235)
T 3l77_A          216 PK  217 (235)
T ss_dssp             CT
T ss_pred             CC
Confidence            76

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*

Probab=99.79  E-value=1.2e-18  Score=152.07  Aligned_cols=222  Identities=15%  Similarity=0.027  Sum_probs=148.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCch----------------hhcc----CCCCCCccCCCeeecCCc
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSK----------------AELI----FPGKKTRFFPGVMIAEEP  108 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~----------------~~~~----~~~~~~~~~~~~d~~~~~  108 (355)
                      .+++++||||+|.||+++++.|+++|++|++++|+...                ....    ...........+|+.|++
T Consensus        10 ~~k~~lVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~   89 (286)
T 3uve_A           10 EGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRRIVTAEVDVRDYD   89 (286)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCHH
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcCCceEEEEcCCCCHH
Confidence            45799999999999999999999999999999997321                1110    011111113357888988


Q ss_pred             chhhhcC-------CCcEEEECCCCCCC----CCCChhhHHHHHHHhhhhHHHHHHHHHcC--C-CCCCcEEEEeeeeee
Q 018503          109 QWRDCIQ-------GSTAVVNLAGTPIG----TRWSSEIKKEIKESRIRVTSKVVDLINES--P-EGVRPSVLVSATALG  174 (355)
Q Consensus       109 ~~~~~~~-------~~d~vi~~a~~~~~----~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~-~~~~~~v~~Ss~~~~  174 (355)
                      ++.++++       ++|++||+||....    ...+.+.+...+++|+.++..+++++...  . ....++|++||... 
T Consensus        90 ~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~-  168 (286)
T 3uve_A           90 ALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSEEDWTEMIDINLAGVWKTVKAGVPHMIAGGRGGSIILTSSVGG-  168 (286)
T ss_dssp             HHHHHHHHHHHHHSCCCEEEECCCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGG-
T ss_pred             HHHHHHHHHHHHhCCCCEEEECCcccCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCcEEEEECchhh-
Confidence            8877664       78999999997532    23456778889999999999998876441  0 12468999999876 


Q ss_pred             eeCCCCCccccCCCCCCChh-HHHHHHHHHHHHhccC---CCCeEEEEEecEEEeCCCCcccchH-----------HH-H
Q 018503          175 YYGTSETEVFDESSPSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMI-----------PL-F  238 (355)
Q Consensus       175 ~yg~~~~~~~~e~~~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~i~Rp~~i~G~~~~~~~~~~-----------~~-~  238 (355)
                       +..         .+....| .+|...+.+.+.+..+   .|+++..++||.+..+.........           .. .
T Consensus       169 -~~~---------~~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~  238 (286)
T 3uve_A          169 -LKA---------YPHTGHYVAAKHGVVGLMRAFGVELGQHMIRVNSVHPTHVKTPMLHNEGTFKMFRPDLENPGPDDMA  238 (286)
T ss_dssp             -TSC---------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSTTTSSHHHHHHHCTTSSSCCHHHHH
T ss_pred             -ccC---------CCCccHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCCcccccchhhhccccccccchhhHH
Confidence             321         2234567 7787666665554443   5899999999999887542210000           00 0


Q ss_pred             HHHhCCCCCCCCcceecccHHHHHHHHHHHHhCCC---CCCceEecCCCc
Q 018503          239 MMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPS---YRGVINGTAPNP  285 (355)
Q Consensus       239 ~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~---~~~~~~i~~~~~  285 (355)
                      ....   ... ..+..+.+.+|+|++++.++....   .+..+++.+|..
T Consensus       239 ~~~~---~~~-~~p~r~~~p~dvA~~v~fL~s~~a~~itG~~i~vdGG~~  284 (286)
T 3uve_A          239 PICQ---MFH-TLPIPWVEPIDISNAVLFFASDEARYITGVTLPIDAGSC  284 (286)
T ss_dssp             HHHH---TTC-SSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             HHHH---hhh-ccCCCcCCHHHHHHHHHHHcCccccCCcCCEEeECCccc
Confidence            0000   001 111457899999999999997543   455888888754

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A

Probab=99.79  E-value=1.6e-18  Score=149.94  Aligned_cols=221  Identities=14%  Similarity=0.008  Sum_probs=148.3

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchh-hcc----CCCCCCccCCCeeecCCcchhhhcC-------
Q 018503           48 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKA-ELI----FPGKKTRFFPGVMIAEEPQWRDCIQ-------  115 (355)
Q Consensus        48 ~~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~~----~~~~~~~~~~~~d~~~~~~~~~~~~-------  115 (355)
                      ..++++|||||+|+||++++++|+++|++|++++++.... ...    ...........+|+.|.+++.++++       
T Consensus        16 l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   95 (270)
T 3is3_A           16 LDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIKADIRQVPEIVKLFDQAVAHFG   95 (270)
T ss_dssp             CTTCEEEESCTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            3457999999999999999999999999999988765332 111    1111111134578999888877664       


Q ss_pred             CCcEEEECCCCCCC---CCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCC
Q 018503          116 GSTAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGN  192 (355)
Q Consensus       116 ~~d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~  192 (355)
                      ++|++||+||....   ...+.+.+...+++|+.++.++++++...-....++|++||......          ..+...
T Consensus        96 ~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~----------~~~~~~  165 (270)
T 3is3_A           96 HLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTSSNTSKDF----------SVPKHS  165 (270)
T ss_dssp             CCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCTTTTTC----------CCTTCH
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEEeCchhccC----------CCCCCc
Confidence            68999999997532   23466778899999999999999988662122458999999653101          122345


Q ss_pred             hh-HHHHHHHHHHHHhccC---CCCeEEEEEecEEEeCCCCcc---------cchHHHH--HHHhCCCCCCCCcceeccc
Q 018503          193 DY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGAL---------AKMIPLF--MMFAGGPLGSGQQWFSWIH  257 (355)
Q Consensus       193 ~y-~~k~~~~~~~~~~~~~---~~~~~~i~Rp~~i~G~~~~~~---------~~~~~~~--~~~~~~~~~~~~~~~~~i~  257 (355)
                      .| .+|...+.+.+.+..+   .|+++..++||.+..+.....         .......  ......++      ..+.+
T Consensus       166 ~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~------~r~~~  239 (270)
T 3is3_A          166 LYSGSKGAVDSFVRIFSKDCGDKKITVNAVAPGGTVTDMFHEVSHHYIPNGTSYTAEQRQQMAAHASPL------HRNGW  239 (270)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTTHHHHGGGGSTTGGGSCHHHHHHHHHHHSTT------CSCBC
T ss_pred             hhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChhhhhhhhhccccccccchHHHHHHHHhcCCC------CCCCC
Confidence            67 7787766666555443   489999999999988742110         0000111  11111122      24688


Q ss_pred             HHHHHHHHHHHHhCCC---CCCceEecCCC
Q 018503          258 LDDIVNLIYEALSNPS---YRGVINGTAPN  284 (355)
Q Consensus       258 v~Dva~~~~~~~~~~~---~~~~~~i~~~~  284 (355)
                      .+|+|++++.++....   .+..+++.+|.
T Consensus       240 p~dvA~~v~~L~s~~~~~itG~~i~vdGG~  269 (270)
T 3is3_A          240 PQDVANVVGFLVSKEGEWVNGKVLTLDGGA  269 (270)
T ss_dssp             HHHHHHHHHHHTSGGGTTCCSCEEEESTTC
T ss_pred             HHHHHHHHHHHcCCccCCccCcEEEeCCCC
Confidence            9999999999997543   35578887764

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}

Probab=99.79  E-value=7.3e-19  Score=151.28  Aligned_cols=207  Identities=14%  Similarity=0.159  Sum_probs=136.5

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCC----CCCccCCCeeecCCcchhhhcC-------C
Q 018503           48 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG----KKTRFFPGVMIAEEPQWRDCIQ-------G  116 (355)
Q Consensus        48 ~~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~----~~~~~~~~~d~~~~~~~~~~~~-------~  116 (355)
                      ++++++|||||+|+||+++++.|++.|++|++++|+.+........    ........+|+.|.+++.++++       +
T Consensus         2 l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   81 (264)
T 3tfo_A            2 VMDKVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGGTALAQVLDVTDRHSVAAFAQAAVDTWGR   81 (264)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            3457899999999999999999999999999999987654332110    1111133478889888776664       7


Q ss_pred             CcEEEECCCCCCC---CCCChhhHHHHHHHhhhhHHHHHHHHHcC--CCCCCcEEEEeeeeeeeeCCCCCccccCCCCCC
Q 018503          117 STAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSG  191 (355)
Q Consensus       117 ~d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~  191 (355)
                      +|++||+||....   ...+.+.+...+++|+.++..+++++...  ..+.+++|++||...  +..         .+..
T Consensus        82 iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~--~~~---------~~~~  150 (264)
T 3tfo_A           82 IDVLVNNAGVMPLSPLAAVKVDEWERMIDVNIKGVLWGIGAVLPIMEAQRSGQIINIGSIGA--LSV---------VPTA  150 (264)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGG--TCC---------CTTC
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCeEEEEEcCHHH--ccc---------CCCC
Confidence            8999999997532   23456778899999999998888776331  135678999999876  321         1234


Q ss_pred             Chh-HHHHHHHHHHHHhccCC-CCeEEEEEecEEEeCCCCcccchHHHHHHHhCCCCCCCCcceecccHHHHHHHHHHHH
Q 018503          192 NDY-LAEVCREWEGTALKVNK-DVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEAL  269 (355)
Q Consensus       192 ~~y-~~k~~~~~~~~~~~~~~-~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~  269 (355)
                      ..| .+|...+.+.+.+..+. ++++..++||.+..+........   .. ..  ..  ......+...+|+|++++.++
T Consensus       151 ~~Y~asKaal~~l~~~la~e~~gIrvn~v~PG~v~T~~~~~~~~~---~~-~~--~~--~~~~~~~~~pedvA~~v~~l~  222 (264)
T 3tfo_A          151 AVYCATKFAVRAISDGLRQESTNIRVTCVNPGVVESELAGTITHE---ET-MA--AM--DTYRAIALQPADIARAVRQVI  222 (264)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHCSSEEEEEEEECCC-------------------------------CCCHHHHHHHHHHHH
T ss_pred             hhHHHHHHHHHHHHHHHHHhCCCCEEEEEecCCCcCcccccccch---hH-HH--HH--HhhhccCCCHHHHHHHHHHHh
Confidence            567 77876666655544432 89999999999887642211000   00 00  00  001112478999999999999


Q ss_pred             hCCC
Q 018503          270 SNPS  273 (355)
Q Consensus       270 ~~~~  273 (355)
                      ..+.
T Consensus       223 s~~~  226 (264)
T 3tfo_A          223 EAPQ  226 (264)
T ss_dssp             HSCT
T ss_pred             cCCc
Confidence            9876

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2

Probab=99.79  E-value=1.1e-18  Score=151.80  Aligned_cols=207  Identities=16%  Similarity=0.091  Sum_probs=137.4

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCC----CC--CCccCCCeeecCCcchhhhcC------
Q 018503           48 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP----GK--KTRFFPGVMIAEEPQWRDCIQ------  115 (355)
Q Consensus        48 ~~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~--~~~~~~~~d~~~~~~~~~~~~------  115 (355)
                      +..++||||||+|+||+++++.|+++|++|++++|+.........    ..  .......+|+.|++++.++++      
T Consensus        30 l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  109 (279)
T 1xg5_A           30 WRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQH  109 (279)
T ss_dssp             GTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHHhC
Confidence            345789999999999999999999999999999998765432211    00  000133468888888877664      


Q ss_pred             -CCcEEEECCCCCCCC---CCChhhHHHHHHHhhhh----HHHHHHHHHcCCCCC--CcEEEEeeeeeeeeCCCCCcccc
Q 018503          116 -GSTAVVNLAGTPIGT---RWSSEIKKEIKESRIRV----TSKVVDLINESPEGV--RPSVLVSATALGYYGTSETEVFD  185 (355)
Q Consensus       116 -~~d~vi~~a~~~~~~---~~~~~~~~~~~~~n~~~----~~~l~~a~~~~~~~~--~~~v~~Ss~~~~~yg~~~~~~~~  185 (355)
                       ++|+|||+||.....   ....+.+...+++|+.+    ++.+++.+++  .+.  +++|++||...  +...      
T Consensus       110 g~iD~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~--~~~~~g~iv~isS~~~--~~~~------  179 (279)
T 1xg5_A          110 SGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKE--RNVDDGHIININSMSG--HRVL------  179 (279)
T ss_dssp             CCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH--TTCCSCEEEEECCGGG--TSCC------
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh--cCCCCceEEEEcChhh--cccC------
Confidence             799999999975322   23566778899999999    6667777776  453  79999999876  4311      


Q ss_pred             CCCCCCChh-HHHHHHHHHHHHhcc-----CCCCeEEEEEecEEEeCCCC-cccchHHHHHHHhCCCCCCCCcceecccH
Q 018503          186 ESSPSGNDY-LAEVCREWEGTALKV-----NKDVRLALIRIGIVLGKDGG-ALAKMIPLFMMFAGGPLGSGQQWFSWIHL  258 (355)
Q Consensus       186 e~~~~~~~y-~~k~~~~~~~~~~~~-----~~~~~~~i~Rp~~i~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~v  258 (355)
                       ..+....| .+|...+.+.+.+..     ..++++++++|+.+.++... ............        .....+++.
T Consensus       180 -~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~--------~~~~~~~~~  250 (279)
T 1xg5_A          180 -PLSVTHFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFAFKLHDKDPEKAAAT--------YEQMKCLKP  250 (279)
T ss_dssp             -SCGGGHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHHHHHTTTCHHHHHHH--------HC---CBCH
T ss_pred             -CCCCCchhHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEecCcccchhhhhhcccChhHHhhh--------cccccCCCH
Confidence             01123457 677665554443322     45899999999999876310 000000000000        011247899


Q ss_pred             HHHHHHHHHHHhCCC
Q 018503          259 DDIVNLIYEALSNPS  273 (355)
Q Consensus       259 ~Dva~~~~~~~~~~~  273 (355)
                      +|+|++++.++..+.
T Consensus       251 ~dvA~~i~~l~~~~~  265 (279)
T 1xg5_A          251 EDVAEAVIYVLSTPA  265 (279)
T ss_dssp             HHHHHHHHHHHHSCT
T ss_pred             HHHHHHHHHHhcCCc
Confidence            999999999998764

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}

Probab=99.79  E-value=1.7e-18  Score=148.96  Aligned_cols=222  Identities=13%  Similarity=0.062  Sum_probs=144.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCC-chhhcc----CCCCCCccCCCeeecCCcchhhhcC-------C
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSR-SKAELI----FPGKKTRFFPGVMIAEEPQWRDCIQ-------G  116 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~-~~~~~~----~~~~~~~~~~~~d~~~~~~~~~~~~-------~  116 (355)
                      .+++++||||+|+||++++++|+++|++|+++++.. +.....    ...........+|+.|.+++.++++       +
T Consensus         7 ~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   86 (259)
T 3edm_A            7 TNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLGRSALAIKADLTNAAEVEAAISAAADKFGE   86 (259)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHTTTSCCEEEECCTTCHHHHHHHHHHHHHHHCS
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence            457999999999999999999999999999985543 322211    1111111234579999888877764       7


Q ss_pred             CcEEEECCCCC-CC---CCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeee-CCCCCccccCCCCCC
Q 018503          117 STAVVNLAGTP-IG---TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYY-GTSETEVFDESSPSG  191 (355)
Q Consensus       117 ~d~vi~~a~~~-~~---~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~y-g~~~~~~~~e~~~~~  191 (355)
                      +|++||+||.. ..   ...+.+.+...+++|+.++.++++++...-....++|++||...  + ..         .+..
T Consensus        87 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~~--~~~~---------~~~~  155 (259)
T 3edm_A           87 IHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAKGGAIVTFSSQAG--RDGG---------GPGA  155 (259)
T ss_dssp             EEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHH--HHCC---------STTC
T ss_pred             CCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCEEEEEcCHHh--ccCC---------CCCc
Confidence            89999999864 11   24456777889999999999999998772112348999999876  3 21         1234


Q ss_pred             Chh-HHHHHHHHHHHHhccCC--CCeEEEEEecEEEeCCCCcccchHHHHHHHhCCCCCCCCcceecccHHHHHHHHHHH
Q 018503          192 NDY-LAEVCREWEGTALKVNK--DVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEA  268 (355)
Q Consensus       192 ~~y-~~k~~~~~~~~~~~~~~--~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~  268 (355)
                      ..| .+|...+.+...+..+.  ++++..+.||.+..+.......  +..    ...+........+.+.+|+|++++.+
T Consensus       156 ~~Y~asKaa~~~l~~~la~e~~~~I~vn~v~PG~v~T~~~~~~~~--~~~----~~~~~~~~p~~r~~~pedva~~v~~L  229 (259)
T 3edm_A          156 LAYATSKGAVMTFTRGLAKEVGPKIRVNAVCPGMISTTFHDTFTK--PEV----RERVAGATSLKREGSSEDVAGLVAFL  229 (259)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCC----------------------------CCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCcCcccccccC--hHH----HHHHHhcCCCCCCcCHHHHHHHHHHH
Confidence            567 77877666665544432  3999999999988764322110  000    00011112234578999999999999


Q ss_pred             HhCCC---CCCceEecCCCccC
Q 018503          269 LSNPS---YRGVINGTAPNPVR  287 (355)
Q Consensus       269 ~~~~~---~~~~~~i~~~~~~s  287 (355)
                      +....   .+..+++.+|....
T Consensus       230 ~s~~~~~itG~~i~vdGg~~~~  251 (259)
T 3edm_A          230 ASDDAAYVTGACYDINGGVLFS  251 (259)
T ss_dssp             HSGGGTTCCSCEEEESBCSSBC
T ss_pred             cCccccCccCCEEEECCCcCCC
Confidence            97643   45588888876443

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.79  E-value=2.8e-19  Score=154.10  Aligned_cols=218  Identities=15%  Similarity=0.087  Sum_probs=145.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCC-CCccCCCeeecCCcchhhhcC-------CCcEE
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGK-KTRFFPGVMIAEEPQWRDCIQ-------GSTAV  120 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~~-------~~d~v  120 (355)
                      ++|+++||||+|+||++++++|+++|++|++++|+.+......... .......+|+.|.+++.++++       .+|++
T Consensus         5 ~~k~vlITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD~l   84 (263)
T 2a4k_A            5 SGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAEAIAVVADVSDPKAVEAVFAEALEEFGRLHGV   84 (263)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCCSSEEEEECCTTSHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCceEEEEcCCCCHHHHHHHHHHHHHHcCCCcEE
Confidence            4578999999999999999999999999999999876544322111 111134578888888776664       57999


Q ss_pred             EECCCCCCC---CCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCChh-HH
Q 018503          121 VNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-LA  196 (355)
Q Consensus       121 i~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~~y-~~  196 (355)
                      ||+||....   ...+.+.++..+++|+.++.++++++...-....++|++||...  ++.          +....| .+
T Consensus        85 vnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~--~~~----------~~~~~Y~as  152 (263)
T 2a4k_A           85 AHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVAG--LGA----------FGLAHYAAG  152 (263)
T ss_dssp             EEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCTT--CCH----------HHHHHHHHC
T ss_pred             EECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEecchh--cCC----------CCcHHHHHH
Confidence            999997532   22345667889999999999999988662112468999999876  421          112345 55


Q ss_pred             HHHHHHHHHHhcc---CCCCeEEEEEecEEEeCCCCccc-chHHHHHHHhCCCCCCCCcceecccHHHHHHHHHHHHhCC
Q 018503          197 EVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALA-KMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNP  272 (355)
Q Consensus       197 k~~~~~~~~~~~~---~~~~~~~i~Rp~~i~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~  272 (355)
                      |...+.+.+.+..   ..|+++++++||.+.++...... ....  ......+.      ..+.+.+|+|++++.++..+
T Consensus       153 K~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~--~~~~~~p~------~~~~~p~dvA~~v~~l~s~~  224 (263)
T 2a4k_A          153 KLGVVGLARTLALELARKGVRVNVLLPGLIQTPMTAGLPPWAWE--QEVGASPL------GRAGRPEEVAQAALFLLSEE  224 (263)
T ss_dssp             SSHHHHHHHHHHHHHTTTTCEEEEEEECSBCCGGGTTSCHHHHH--HHHHTSTT------CSCBCHHHHHHHHHHHHSGG
T ss_pred             HHHHHHHHHHHHHHhhhhCcEEEEEEeCcCcCchhhhcCHHHHH--HHHhcCCC------CCCcCHHHHHHHHHHHhCcc
Confidence            5544433333222   35899999999999887532211 1111  11222222      23789999999999999754


Q ss_pred             C---CCCceEecCCCcc
Q 018503          273 S---YRGVINGTAPNPV  286 (355)
Q Consensus       273 ~---~~~~~~i~~~~~~  286 (355)
                      .   .+..+++.+|...
T Consensus       225 ~~~~tG~~i~vdgG~~~  241 (263)
T 2a4k_A          225 SAYITGQALYVDGGRSI  241 (263)
T ss_dssp             GTTCCSCEEEESTTTTT
T ss_pred             ccCCcCCEEEECCCccc
Confidence            3   3457888877543

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}

Probab=99.79  E-value=6.1e-19  Score=152.39  Aligned_cols=226  Identities=14%  Similarity=0.042  Sum_probs=149.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCC------CCCccCCCeeecCCcchhhhcC---CCcE
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG------KKTRFFPGVMIAEEPQWRDCIQ---GSTA  119 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~------~~~~~~~~~d~~~~~~~~~~~~---~~d~  119 (355)
                      ..+++|||||+|+||++++++|+++|++|++++|+.+........      ........+|+.+.+.+.++++   ++|+
T Consensus         9 ~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~id~   88 (267)
T 3t4x_A            9 KGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQGCQDVIEKYPKVDI   88 (267)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSHHHHHHHHHHCCCCSE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCHHHHHHHHHhcCCCCE
Confidence            357899999999999999999999999999999987654322110      0000123468888887777664   7899


Q ss_pred             EEECCCCCCC---CCCChhhHHHHHHHhhhhHHHHHHHHHcC--CCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCChh
Q 018503          120 VVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY  194 (355)
Q Consensus       120 vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~~y  194 (355)
                      +||+||....   .....+.+...+++|+.++..+++++...  ..+..++|++||...  +..         .+....|
T Consensus        89 lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~--~~~---------~~~~~~Y  157 (267)
T 3t4x_A           89 LINNLGIFEPVEYFDIPDEDWFKLFEVNIMSGVRLTRSYLKKMIERKEGRVIFIASEAA--IMP---------SQEMAHY  157 (267)
T ss_dssp             EEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTEEEEEEECCGGG--TSC---------CTTCHHH
T ss_pred             EEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEEcchhh--ccC---------CCcchHH
Confidence            9999997533   23355677888999999977776654321  045678999999876  321         2234567


Q ss_pred             -HHHHHHHHHHHHhccC---CCCeEEEEEecEEEeCCCCcc---------cchHHHH-HHHhCCCCCCCCcceecccHHH
Q 018503          195 -LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGAL---------AKMIPLF-MMFAGGPLGSGQQWFSWIHLDD  260 (355)
Q Consensus       195 -~~k~~~~~~~~~~~~~---~~~~~~i~Rp~~i~G~~~~~~---------~~~~~~~-~~~~~~~~~~~~~~~~~i~v~D  260 (355)
                       .+|...+.+.+.+..+   .|+++..++||.+..+.....         ....... ......  ........+.+.+|
T Consensus       158 ~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~r~~~ped  235 (267)
T 3t4x_A          158 SATKTMQLSLSRSLAELTTGTNVTVNTIMPGSTLTEGVETMLNSLYPNEQLTIEEAEKRFMKEN--RPTSIIQRLIRPEE  235 (267)
T ss_dssp             HHHHHHHHHHHHHHHHHTTTSEEEEEEEEECCBCCHHHHHHHHHSSTTSCCCHHHHHHHHHHHH--CTTCSSCSCBCTHH
T ss_pred             HHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCeecCccHHHHHhhcCcccCCCHHHHHHHHhhcc--CCcccccCccCHHH
Confidence             7787777666655443   479999999999877521100         0000000 000000  00111235889999


Q ss_pred             HHHHHHHHHhCCC---CCCceEecCCCccC
Q 018503          261 IVNLIYEALSNPS---YRGVINGTAPNPVR  287 (355)
Q Consensus       261 va~~~~~~~~~~~---~~~~~~i~~~~~~s  287 (355)
                      +|++++.++....   .+..+++.+|...+
T Consensus       236 vA~~v~fL~s~~~~~itG~~i~vdGG~~~s  265 (267)
T 3t4x_A          236 IAHLVTFLSSPLSSAINGSALRIDGGLVRS  265 (267)
T ss_dssp             HHHHHHHHHSGGGTTCCSCEEEESTTCSCS
T ss_pred             HHHHHHHHcCccccCccCCeEEECCCcccc
Confidence            9999999998543   45589998887655

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}

Probab=99.79  E-value=6.7e-19  Score=151.31  Aligned_cols=220  Identities=17%  Similarity=0.086  Sum_probs=147.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcC------CCcEEEE
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ------GSTAVVN  122 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~------~~d~vi~  122 (355)
                      +++++|||||+|+||++++++|+++|++|++++|+.+........  ......+|+.|.+++.++++      ++|++||
T Consensus         8 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~--~~~~~~~D~~~~~~v~~~~~~~~~~g~id~lv~   85 (257)
T 3tl3_A            8 RDAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIRGEDVVADLGD--RARFAAADVTDEAAVASALDLAETMGTLRIVVN   85 (257)
T ss_dssp             --CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHTCT--TEEEEECCTTCHHHHHHHHHHHHHHSCEEEEEE
T ss_pred             cCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCchHHHHHhcCC--ceEEEECCCCCHHHHHHHHHHHHHhCCCCEEEE
Confidence            346899999999999999999999999999999976543332211  11144578999888877665      7999999


Q ss_pred             CCCCCCC-------CCCChhhHHHHHHHhhhhHHHHHHHHHcC--C--------CCCCcEEEEeeeeeeeeCCCCCcccc
Q 018503          123 LAGTPIG-------TRWSSEIKKEIKESRIRVTSKVVDLINES--P--------EGVRPSVLVSATALGYYGTSETEVFD  185 (355)
Q Consensus       123 ~a~~~~~-------~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~--------~~~~~~v~~Ss~~~~~yg~~~~~~~~  185 (355)
                      |||....       ...+.+.+...+++|+.++..+++++...  +        .+..++|++||...  +..       
T Consensus        86 nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~--~~~-------  156 (257)
T 3tl3_A           86 CAGTGNAIRVLSRDGVFSLAAFRKIVDINLVGSFNVLRLAAERIAKTEPVGPNAEERGVIINTASVAA--FDG-------  156 (257)
T ss_dssp             CGGGSHHHHHHHHTCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCC--CCCCSEEEEEECCCC----CC-------
T ss_pred             CCCCCCCcccccccccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccccccCCCcEEEEEcchhh--cCC-------
Confidence            9996421       12566778899999999999999887642  1        23457999999876  321       


Q ss_pred             CCCCCCChh-HHHHHHHHHHHHhcc---CCCCeEEEEEecEEEeCCCCcccchHHHHHHHhCCCCCCCCcceecccHHHH
Q 018503          186 ESSPSGNDY-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDI  261 (355)
Q Consensus       186 e~~~~~~~y-~~k~~~~~~~~~~~~---~~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dv  261 (355)
                        .+....| .+|...+.+.+.+..   ..|+++..++||.+..+.......-. ........+.     ...+.+.+|+
T Consensus       157 --~~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~-~~~~~~~~~~-----~~r~~~p~dv  228 (257)
T 3tl3_A          157 --QIGQAAYSASKGGVVGMTLPIARDLASHRIRVMTIAPGLFDTPLLASLPEEA-RASLGKQVPH-----PSRLGNPDEY  228 (257)
T ss_dssp             --HHHHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTC---CHHH-HHHHHHTSSS-----SCSCBCHHHH
T ss_pred             --CCCCccHHHHHHHHHHHHHHHHHHhcccCcEEEEEEecCccChhhhhccHHH-HHHHHhcCCC-----CCCccCHHHH
Confidence              1112457 777766555544433   24899999999999887543221111 0111222221     1247899999


Q ss_pred             HHHHHHHHhCCC-CCCceEecCCCccC
Q 018503          262 VNLIYEALSNPS-YRGVINGTAPNPVR  287 (355)
Q Consensus       262 a~~~~~~~~~~~-~~~~~~i~~~~~~s  287 (355)
                      |++++.++..+. .+..+++.+|..++
T Consensus       229 a~~v~~l~s~~~itG~~i~vdGG~~~~  255 (257)
T 3tl3_A          229 GALAVHIIENPMLNGEVIRLDGAIRMA  255 (257)
T ss_dssp             HHHHHHHHHCTTCCSCEEEESTTC---
T ss_pred             HHHHHHHhcCCCCCCCEEEECCCccCC
Confidence            999999998755 44588888876443

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0

Probab=99.79  E-value=1.7e-18  Score=146.63  Aligned_cols=198  Identities=17%  Similarity=0.046  Sum_probs=136.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCC-CCccCCCeeecCCcchhhhcC-------CCcEE
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGK-KTRFFPGVMIAEEPQWRDCIQ-------GSTAV  120 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~~-------~~d~v  120 (355)
                      ++++++||||+|+||++++++|+++|++|++++|+.+......... .......+|+.|.+++.++++       .+|++
T Consensus         2 s~k~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~l   81 (235)
T 3l6e_A            2 SLGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLLGNAVIGIVADLAHHEDVDVAFAAAVEWGGLPELV   81 (235)
T ss_dssp             -CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTSHHHHHHHHHHHHHHHCSCSEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHHhcCCCcEE
Confidence            3478999999999999999999999999999999876544321110 001134578889888776664       68999


Q ss_pred             EECCCCCCC---CCCChhhHHHHHHHhhhhHHHHHHHHHcC-CCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCChh-H
Q 018503          121 VNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES-PEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-L  195 (355)
Q Consensus       121 i~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~~y-~  195 (355)
                      ||+||....   ...+.+.+...+++|+.++..+++++... .....++|++||...  +..         .+....| .
T Consensus        82 vnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~iv~isS~~~--~~~---------~~~~~~Y~a  150 (235)
T 3l6e_A           82 LHCAGTGEFGPVGVYTAEQIRRVMESNLVSTILVAQQTVRLIGERGGVLANVLSSAA--QVG---------KANESLYCA  150 (235)
T ss_dssp             EEECCCC------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEECCEEC--CSS---------CSSHHHHHH
T ss_pred             EECCCCCCCCChHhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEEeCHHh--cCC---------CCCCcHHHH
Confidence            999997432   24467778899999999998888877431 112238999999876  321         1223467 7


Q ss_pred             HHHHHHHHHHHhcc---CCCCeEEEEEecEEEeCCCCcccchHHHHHHHhCCCCCCCCcceecccHHHHHHHHHHHHhCC
Q 018503          196 AEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNP  272 (355)
Q Consensus       196 ~k~~~~~~~~~~~~---~~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~  272 (355)
                      +|...+.+.+.+..   ..|+++..++||.+..+.......                .....+...+|+|++++.++..+
T Consensus       151 sKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~----------------~~~~~~~~pedvA~~v~~l~~~~  214 (235)
T 3l6e_A          151 SKWGMRGFLESLRAELKDSPLRLVNLYPSGIRSEFWDNTDH----------------VDPSGFMTPEDAAAYMLDALEAR  214 (235)
T ss_dssp             HHHHHHHHHHHHHHHTTTSSEEEEEEEEEEECCCC---------------------------CBCHHHHHHHHHHHTCCC
T ss_pred             HHHHHHHHHHHHHHHhhccCCEEEEEeCCCccCcchhccCC----------------CCCcCCCCHHHHHHHHHHHHhCC
Confidence            78777666655544   348999999999997663211100                01124789999999999999866


Q ss_pred             C
Q 018503          273 S  273 (355)
Q Consensus       273 ~  273 (355)
                      .
T Consensus       215 ~  215 (235)
T 3l6e_A          215 S  215 (235)
T ss_dssp             S
T ss_pred             C
Confidence            4

>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*

Probab=99.79  E-value=3.6e-18  Score=144.17  Aligned_cols=214  Identities=15%  Similarity=0.093  Sum_probs=147.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhc-------CCCcEEE
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCI-------QGSTAVV  121 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~-------~~~d~vi  121 (355)
                      |.|+||||||++.||+++++.|++.|++|++++|+.+................+|+.|++++++++       .++|++|
T Consensus         1 MnK~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~g~iDiLV   80 (247)
T 3ged_A            1 MNRGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFAKERPNLFYFHGDVADPLTLKKFVEYAMEKLQRIDVLV   80 (247)
T ss_dssp             -CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEE
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCCEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            347899999999999999999999999999999998766554443322234567999988877665       3789999


Q ss_pred             ECCCCCCC---CCCChhhHHHHHHHhhhhHHHHHHHHHcC-CCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCChh-HH
Q 018503          122 NLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES-PEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-LA  196 (355)
Q Consensus       122 ~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~~y-~~  196 (355)
                      |+||....   .+.+.+.++..+++|+.++..+.+++... ..+..++|++||...  +..         .+....| .+
T Consensus        81 NNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~G~IInisS~~~--~~~---------~~~~~~Y~as  149 (247)
T 3ged_A           81 NNACRGSKGILSSLLYEEFDYILSVGLKAPYELSRLCRDELIKNKGRIINIASTRA--FQS---------EPDSEAYASA  149 (247)
T ss_dssp             ECCCCCCCCGGGTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGG--TSC---------CTTCHHHHHH
T ss_pred             ECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCcEEEEeeccc--ccC---------CCCCHHHHHH
Confidence            99997533   34567888999999999988887766432 113368999999765  211         2234567 77


Q ss_pred             HHHHHHHHHHhccC--CCCeEEEEEecEEEeCCCCcccchHHHHHHHhCCCCCCCCcceecccHHHHHHHHHHHHhCCC-
Q 018503          197 EVCREWEGTALKVN--KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPS-  273 (355)
Q Consensus       197 k~~~~~~~~~~~~~--~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~-  273 (355)
                      |.....+.+.+..+  .++++..+.||.+-.+.....   ..  ......|++      .+...+|+|++++.++...- 
T Consensus       150 Kaal~~ltk~lA~ela~~IrVN~I~PG~i~t~~~~~~---~~--~~~~~~Pl~------R~g~pediA~~v~fL~s~~~i  218 (247)
T 3ged_A          150 KGGIVALTHALAMSLGPDVLVNCIAPGWINVTEQQEF---TQ--EDCAAIPAG------KVGTPKDISNMVLFLCQQDFI  218 (247)
T ss_dssp             HHHHHHHHHHHHHHHTTTSEEEEEEECSBCCCC---C---CH--HHHHTSTTS------SCBCHHHHHHHHHHHHHCSSC
T ss_pred             HHHHHHHHHHHHHHHCCCCEEEEEecCcCCCCCcHHH---HH--HHHhcCCCC------CCcCHHHHHHHHHHHHhCCCC
Confidence            76544444333221  389999999998866543221   11  111222332      25778999999999998544 


Q ss_pred             CCCceEecCCC
Q 018503          274 YRGVINGTAPN  284 (355)
Q Consensus       274 ~~~~~~i~~~~  284 (355)
                      .+..+.+.+|-
T Consensus       219 TG~~i~VDGG~  229 (247)
T 3ged_A          219 TGETIIVDGGM  229 (247)
T ss_dssp             CSCEEEESTTG
T ss_pred             CCCeEEECcCH
Confidence            34477777663

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}

Probab=99.79  E-value=1.1e-18  Score=153.35  Aligned_cols=222  Identities=9%  Similarity=0.008  Sum_probs=148.9

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCch------------hhc----cCCCCCCccCCCeeecCCcchh
Q 018503           48 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSK------------AEL----IFPGKKTRFFPGVMIAEEPQWR  111 (355)
Q Consensus        48 ~~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~------------~~~----~~~~~~~~~~~~~d~~~~~~~~  111 (355)
                      ..+++++||||+|.||+++++.|++.|++|++++|+...            ...    +...........+|+.|.+++.
T Consensus        26 l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~  105 (299)
T 3t7c_A           26 VEGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQVDVRDFDAMQ  105 (299)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHH
T ss_pred             cCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHH
Confidence            345799999999999999999999999999999997321            111    0001111113457888988887


Q ss_pred             hhcC-------CCcEEEECCCCCCC----CCCChhhHHHHHHHhhhhHHHHHHHHHcC---CCCCCcEEEEeeeeeeeeC
Q 018503          112 DCIQ-------GSTAVVNLAGTPIG----TRWSSEIKKEIKESRIRVTSKVVDLINES---PEGVRPSVLVSATALGYYG  177 (355)
Q Consensus       112 ~~~~-------~~d~vi~~a~~~~~----~~~~~~~~~~~~~~n~~~~~~l~~a~~~~---~~~~~~~v~~Ss~~~~~yg  177 (355)
                      ++++       .+|++|||||....    ...+.+.+...+++|+.++..+++++...   ..+..++|++||...  +.
T Consensus       106 ~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~Iv~isS~~~--~~  183 (299)
T 3t7c_A          106 AAVDDGVTQLGRLDIVLANAALASEGTRLNRMDPKTWRDMIDVNLNGAWITARVAIPHIMAGKRGGSIVFTSSIGG--LR  183 (299)
T ss_dssp             HHHHHHHHHHSCCCEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTSCEEEEEECCGGG--TS
T ss_pred             HHHHHHHHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhh--cc
Confidence            7664       78999999997532    23466778899999999999998876431   123568999999766  32


Q ss_pred             CCCCccccCCCCCCChh-HHHHHHHHHHHHhccC---CCCeEEEEEecEEEeCCCCcccc-----------hHHHH-HH-
Q 018503          178 TSETEVFDESSPSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAK-----------MIPLF-MM-  240 (355)
Q Consensus       178 ~~~~~~~~e~~~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~i~Rp~~i~G~~~~~~~~-----------~~~~~-~~-  240 (355)
                      .         .+....| .+|...+.+.+.+..+   .|+++..++||.+..+.......           ..... .. 
T Consensus       184 ~---------~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (299)
T 3t7c_A          184 G---------AENIGNYIASKHGLHGLMRTMALELGPRNIRVNIVCPSSVATPMLLNEPTYRMFRPDLENPTVEDFQVAS  254 (299)
T ss_dssp             C---------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTSSHHHHHHHCTTSSSCCHHHHHHHH
T ss_pred             C---------CCCcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCCccCccccccchhhhhhhhhccchhhHHHHHh
Confidence            1         2234567 7787666665554443   38999999999998875322100           00000 00 


Q ss_pred             HhCCCCCCCCcceecccHHHHHHHHHHHHhCCC---CCCceEecCCCc
Q 018503          241 FAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPS---YRGVINGTAPNP  285 (355)
Q Consensus       241 ~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~---~~~~~~i~~~~~  285 (355)
                      .....     ....+...+|+|++++.++....   .+..+++.+|..
T Consensus       255 ~~~~~-----~p~r~~~pedvA~~v~fL~s~~a~~itG~~i~vdGG~~  297 (299)
T 3t7c_A          255 RQMHV-----LPIPYVEPADISNAILFLVSDDARYITGVSLPVDGGAL  297 (299)
T ss_dssp             HHHSS-----SSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             hhhcc-----cCcCCCCHHHHHHHHHHHhCcccccCcCCEEeeCCCcc
Confidence            00000     01347899999999999997643   455888888754

>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}

Probab=99.78  E-value=4.1e-18  Score=142.80  Aligned_cols=216  Identities=12%  Similarity=0.065  Sum_probs=148.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcC---CCcEEEECCC
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ---GSTAVVNLAG  125 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~---~~d~vi~~a~  125 (355)
                      +.|+++||||++.||+++++.|+++|++|++.+|+.+........  ......+|+.|+++++++++   ++|++|||||
T Consensus        10 ~GK~alVTGas~GIG~aia~~la~~Ga~Vv~~~~~~~~~~~~~~~--~~~~~~~Dv~~~~~v~~~~~~~g~iDiLVNNAG   87 (242)
T 4b79_A           10 AGQQVLVTGGSSGIGAAIAMQFAELGAEVVALGLDADGVHAPRHP--RIRREELDITDSQRLQRLFEALPRLDVLVNNAG   87 (242)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTSTTSCCCT--TEEEEECCTTCHHHHHHHHHHCSCCSEEEECCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHhhhhcC--CeEEEEecCCCHHHHHHHHHhcCCCCEEEECCC
Confidence            468999999999999999999999999999999988765433221  11234578999888877664   7899999999


Q ss_pred             CCCC-CCCChhhHHHHHHHhhhhHHHHHHHHHcC-CCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCChh-HHHHHHHH
Q 018503          126 TPIG-TRWSSEIKKEIKESRIRVTSKVVDLINES-PEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-LAEVCREW  202 (355)
Q Consensus       126 ~~~~-~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~~y-~~k~~~~~  202 (355)
                      ...+ ...+.+.++..+++|+.++..+.+++..+ +.+..++|++||...  .-         ..+....| .+|.....
T Consensus        88 i~~~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS~~~--~~---------~~~~~~~Y~asKaav~~  156 (242)
T 4b79_A           88 ISRDREEYDLATFERVLRLNLSAAMLASQLARPLLAQRGGSILNIASMYS--TF---------GSADRPAYSASKGAIVQ  156 (242)
T ss_dssp             CCCGGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCEEEEEECCGGG--TS---------CCSSCHHHHHHHHHHHH
T ss_pred             CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeeccc--cC---------CCCCCHHHHHHHHHHHH
Confidence            7543 34567788999999999988887766432 123368999999765  21         12234568 77766555


Q ss_pred             HHHHhcc---CCCCeEEEEEecEEEeCCCCcccchHHHH-HHHhCCCCCCCCcceecccHHHHHHHHHHHHhCCC---CC
Q 018503          203 EGTALKV---NKDVRLALIRIGIVLGKDGGALAKMIPLF-MMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPS---YR  275 (355)
Q Consensus       203 ~~~~~~~---~~~~~~~i~Rp~~i~G~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~---~~  275 (355)
                      +.+.+..   .+|+++..|.||.+..+.......-.... ......|++      .+...+|+|++++.++....   .+
T Consensus       157 ltr~lA~Ela~~gIrVNaV~PG~i~T~m~~~~~~~~~~~~~~~~~~Plg------R~g~peeiA~~v~fLaSd~a~~iTG  230 (242)
T 4b79_A          157 LTRSLACEYAAERIRVNAIAPGWIDTPLGAGLKADVEATRRIMQRTPLA------RWGEAPEVASAAAFLCGPGASFVTG  230 (242)
T ss_dssp             HHHHHHHHHGGGTEEEEEEEECSBCCC-----CCCHHHHHHHHHTCTTC------SCBCHHHHHHHHHHHTSGGGTTCCS
T ss_pred             HHHHHHHHhhhcCeEEEEEEeCCCCChhhhcccCCHHHHHHHHhcCCCC------CCcCHHHHHHHHHHHhCchhcCccC
Confidence            5444333   24899999999999776432211111111 233344443      26778999999999997644   34


Q ss_pred             CceEecCC
Q 018503          276 GVINGTAP  283 (355)
Q Consensus       276 ~~~~i~~~  283 (355)
                      ..+.+.+|
T Consensus       231 ~~l~VDGG  238 (242)
T 4b79_A          231 AVLAVDGG  238 (242)
T ss_dssp             CEEEESTT
T ss_pred             ceEEECcc
Confidence            46777665

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=99.78  E-value=8.3e-19  Score=150.69  Aligned_cols=217  Identities=16%  Similarity=0.093  Sum_probs=145.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEe-cCCchhhccC----CCCCCccCCCeeecCCcchhhhcC-------C
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLT-RSRSKAELIF----PGKKTRFFPGVMIAEEPQWRDCIQ-------G  116 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~-r~~~~~~~~~----~~~~~~~~~~~d~~~~~~~~~~~~-------~  116 (355)
                      ..++||||||+|+||++++++|+++|++|++++ |+........    ..........+|+.|.+++.++++       +
T Consensus        12 ~~k~vlITGas~giG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   91 (256)
T 3ezl_A           12 SQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKALGFDFYASEGNVGDWDSTKQAFDKVKAEVGE   91 (256)
T ss_dssp             -CEEEEETTTTSHHHHHHHHHHHHTTEEEEEEECTTCSSHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHTCC
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeeEEEecCCCCHHHHHHHHHHHHHhcCC
Confidence            347899999999999999999999999999988 4443322111    011111134578888887776664       6


Q ss_pred             CcEEEECCCCCCC---CCCChhhHHHHHHHhhhhHHHHHHHH----HcCCCCCCcEEEEeeeeeeeeCCCCCccccCCCC
Q 018503          117 STAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLI----NESPEGVRPSVLVSATALGYYGTSETEVFDESSP  189 (355)
Q Consensus       117 ~d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~----~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~  189 (355)
                      +|++||+||....   .....+.+...+++|+.++.++++++    .+  .+..++|++||...  +..         .+
T Consensus        92 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~--~~~g~iv~isS~~~--~~~---------~~  158 (256)
T 3ezl_A           92 IDVLVNNAGITRDVVFRKMTREDWQAVIDTNLTSLFNVTKQVIDGMVE--RGWGRIINISSVNG--QKG---------QF  158 (256)
T ss_dssp             EEEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH--HTCEEEEEECCCCG--GGS---------CS
T ss_pred             CCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh--cCCCEEEEEcchhh--ccC---------CC
Confidence            8999999997533   23456777889999999988877665    33  35678999999766  321         22


Q ss_pred             CCChh-HHHHHHHHHHHHhccC---CCCeEEEEEecEEEeCCCCcc-cchHHHHHHHhCCCCCCCCcceecccHHHHHHH
Q 018503          190 SGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGAL-AKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNL  264 (355)
Q Consensus       190 ~~~~y-~~k~~~~~~~~~~~~~---~~~~~~i~Rp~~i~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~  264 (355)
                      ....| .+|...+.+.+.+..+   .|+++..++||.+.++..... .....  ......+.      ..+.+.+|+|++
T Consensus       159 ~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~--~~~~~~~~------~~~~~~~dva~~  230 (256)
T 3ezl_A          159 GQTNYSTAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKAIRPDVLE--KIVATIPV------RRLGSPDEIGSI  230 (256)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSCHHHHH--HHHHHSTT------SSCBCHHHHHHH
T ss_pred             CCcccHHHHHHHHHHHHHHHHHHHHhCCEEEEEEECcccCccccccCHHHHH--HHHhcCCC------CCCcCHHHHHHH
Confidence            34567 7787666655544433   489999999999977632111 11111  11122222      247789999999


Q ss_pred             HHHHHhCCC---CCCceEecCCCcc
Q 018503          265 IYEALSNPS---YRGVINGTAPNPV  286 (355)
Q Consensus       265 ~~~~~~~~~---~~~~~~i~~~~~~  286 (355)
                      ++.++....   .+..+++.+|..+
T Consensus       231 ~~~l~s~~~~~~tG~~i~vdgG~~~  255 (256)
T 3ezl_A          231 VAWLASEESGFSTGADFSLNGGLHM  255 (256)
T ss_dssp             HHHHHSGGGTTCCSCEEEESTTSCC
T ss_pred             HHHHhCCcccCCcCcEEEECCCEeC
Confidence            999996543   4558888887543

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}

Probab=99.78  E-value=1.4e-18  Score=149.81  Aligned_cols=199  Identities=16%  Similarity=0.122  Sum_probs=135.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCC----CCCCccCCCeeecCCcchhhhcC-------CC
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP----GKKTRFFPGVMIAEEPQWRDCIQ-------GS  117 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~~d~~~~~~~~~~~~-------~~  117 (355)
                      ..++||||||+|+||++++++|+++|++|++++|+.+.......    .........+|+.|.+++.++++       .+
T Consensus        28 ~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i  107 (262)
T 3rkr_A           28 SGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGGEAESHACDLSHSDAIAAFATGVLAAHGRC  107 (262)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHhcCCC
Confidence            35799999999999999999999999999999998766443211    01111134578888888776664       58


Q ss_pred             cEEEECCCCCC-C---CCCChhhHHHHHHHhhhhHHHHHHHHHcC--CCCCCcEEEEeeeeeeeeCCCCCccccCCCCCC
Q 018503          118 TAVVNLAGTPI-G---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSG  191 (355)
Q Consensus       118 d~vi~~a~~~~-~---~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~  191 (355)
                      |+|||+||... .   .....+.+...+++|+.++..+++++...  ..+.+++|++||...  +..         .+..
T Consensus       108 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~--~~~---------~~~~  176 (262)
T 3rkr_A          108 DVLVNNAGVGWFGGPLHTMKPAEWDALIAVNLKAPYLLLRAFAPAMIAAKRGHIINISSLAG--KNP---------VADG  176 (262)
T ss_dssp             SEEEECCCCCCCSSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCEEEEECSSCS--SCC---------CTTC
T ss_pred             CEEEECCCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCceEEEEechhh--cCC---------CCCC
Confidence            99999999721 1   23456777889999999999988876331  145678999999876  321         2234


Q ss_pred             Chh-HHHHHHHHHHHHhccC---CCCeEEEEEecEEEeCCCCcccchHHHHHHHhCCCCCCCCcceecccHHHHHHHHHH
Q 018503          192 NDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYE  267 (355)
Q Consensus       192 ~~y-~~k~~~~~~~~~~~~~---~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~  267 (355)
                      ..| .+|...+.+...+..+   .|+++..++||.+..+......               .......++..+|+|++++.
T Consensus       177 ~~Y~asKaa~~~l~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~---------------~~~~~~~~~~p~dvA~~v~~  241 (262)
T 3rkr_A          177 AAYTASKWGLNGLMTSAAEELRQHQVRVSLVAPGSVRTEFGVGLS---------------AKKSALGAIEPDDIADVVAL  241 (262)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC-------------------------------CCCHHHHHHHHHH
T ss_pred             chHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCCcCCcccccc---------------cccccccCCCHHHHHHHHHH
Confidence            567 7777666655544432   5899999999998776421110               00112346899999999999


Q ss_pred             HHhCCC
Q 018503          268 ALSNPS  273 (355)
Q Consensus       268 ~~~~~~  273 (355)
                      ++..+.
T Consensus       242 l~s~~~  247 (262)
T 3rkr_A          242 LATQAD  247 (262)
T ss_dssp             HHTCCT
T ss_pred             HhcCcc
Confidence            998764

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}

Probab=99.78  E-value=4.1e-18  Score=145.19  Aligned_cols=210  Identities=14%  Similarity=0.034  Sum_probs=141.5

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhCCCeEEEE-e--cCCchhhccCCCCCCccCCCeeecCCcchhhhc-------CCCcEE
Q 018503           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVL-T--RSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCI-------QGSTAV  120 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~g~~V~~~-~--r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~-------~~~d~v  120 (355)
                      ++++||||+|+||++++++|+++|++|+++ +  |+.+........     ....++.|.+++.+++       .++|++
T Consensus         2 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~r~~~~~~~~~~~-----~~~~~~~~~~~v~~~~~~~~~~~g~iD~l   76 (244)
T 1zmo_A            2 VIALVTHARHFAGPAAVEALTQDGYTVVCHDASFADAAERQRFESE-----NPGTIALAEQKPERLVDATLQHGEAIDTI   76 (244)
T ss_dssp             CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHH-----STTEEECCCCCGGGHHHHHGGGSSCEEEE
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEecCCcCCHHHHHHHHHH-----hCCCcccCHHHHHHHHHHHHHHcCCCCEE
Confidence            689999999999999999999999999999 6  887654433211     1124555666665544       268999


Q ss_pred             EECCCCCCC------CCCChhhHHHHHHHhhhhHHHHHHHHHcC--CCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCC
Q 018503          121 VNLAGTPIG------TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGN  192 (355)
Q Consensus       121 i~~a~~~~~------~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~  192 (355)
                      ||+||....      .....+.+...+++|+.++..+++++...  ..+.+++|++||...  +..         .+...
T Consensus        77 v~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~--~~~---------~~~~~  145 (244)
T 1zmo_A           77 VSNDYIPRPMNRLPLEGTSEADIRQMFEALSIFPILLLQSAIAPLRAAGGASVIFITSSVG--KKP---------LAYNP  145 (244)
T ss_dssp             EECCCCCTTGGGCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGG--TSC---------CTTCT
T ss_pred             EECCCcCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhh--CCC---------CCCch
Confidence            999997432      23356777889999999999988877421  145678999999866  321         22345


Q ss_pred             hh-HHHHHHHHHHHHhcc---CCCCeEEEEEecEEEeCCC---CcccchHHHH-HHHh-CCCCCCCCcceecccHHHHHH
Q 018503          193 DY-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDG---GALAKMIPLF-MMFA-GGPLGSGQQWFSWIHLDDIVN  263 (355)
Q Consensus       193 ~y-~~k~~~~~~~~~~~~---~~~~~~~i~Rp~~i~G~~~---~~~~~~~~~~-~~~~-~~~~~~~~~~~~~i~v~Dva~  263 (355)
                      .| .+|...+.+.+.+..   ..|++++.++||.+..+..   ..... -... .... ..+.      ..+...+|+|+
T Consensus       146 ~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~-~~~~~~~~~~~~p~------~r~~~pe~vA~  218 (244)
T 1zmo_A          146 LYGPARAATVALVESAAKTLSRDGILLYAIGPNFFNNPTYFPTSDWEN-NPELRERVDRDVPL------GRLGRPDEMGA  218 (244)
T ss_dssp             THHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCBTTTBCHHHHHH-CHHHHHHHHHHCTT------CSCBCHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCcccccccccc-hHHHHHHHhcCCCC------CCCcCHHHHHH
Confidence            68 778766665554433   2489999999999877643   11100 0011 1111 1121      13678999999


Q ss_pred             HHHHHHhCCC---CCCceEecCC
Q 018503          264 LIYEALSNPS---YRGVINGTAP  283 (355)
Q Consensus       264 ~~~~~~~~~~---~~~~~~i~~~  283 (355)
                      +++.++....   .+..+.+.+|
T Consensus       219 ~v~~l~s~~~~~~tG~~i~vdgG  241 (244)
T 1zmo_A          219 LITFLASRRAAPIVGQFFAFTGG  241 (244)
T ss_dssp             HHHHHHTTTTGGGTTCEEEESTT
T ss_pred             HHHHHcCccccCccCCEEEeCCC
Confidence            9999998654   3446767665

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*

Probab=99.78  E-value=1.1e-18  Score=151.46  Aligned_cols=200  Identities=15%  Similarity=0.042  Sum_probs=138.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHh-CCCeEEEEecCCchhhccCC----CCCCccCCCeeecCCcchhhhcC-------C
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQA-DNHQVRVLTRSRSKAELIFP----GKKTRFFPGVMIAEEPQWRDCIQ-------G  116 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~-~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~~d~~~~~~~~~~~~-------~  116 (355)
                      .+++|+||||+|+||++++++|++ .|++|++++|+.+.......    .........+|+.|.+++.++++       +
T Consensus         3 ~~k~vlITGasggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~   82 (276)
T 1wma_A            3 GIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYGG   82 (276)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence            357899999999999999999999 99999999998754332110    00001134578888888877765       7


Q ss_pred             CcEEEECCCCCCCCCC--C-hhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCC-CC----------Cc
Q 018503          117 STAVVNLAGTPIGTRW--S-SEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGT-SE----------TE  182 (355)
Q Consensus       117 ~d~vi~~a~~~~~~~~--~-~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~-~~----------~~  182 (355)
                      +|+|||+||.......  . .+.....+++|+.++.++++++.......+++|++||...  +.. ..          ..
T Consensus        83 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~~sS~~~--~~~~~~~~~~~~~~~~~~  160 (276)
T 1wma_A           83 LDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIMS--VRALKSCSPELQQKFRSE  160 (276)
T ss_dssp             EEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHH--HHHHHTSCHHHHHHHHCS
T ss_pred             CCEEEECCcccccCCCccccHHHHHhhhheeeeeHHHHHHHHHHhhCCCCEEEEECChhh--hcccccCChhHHhhcccc
Confidence            8999999997532211  1 3567788999999999999999872112358999999876  421 00          00


Q ss_pred             cccCC---------------------CCCCChh-HHHHHHHHHHHHhccC-------CCCeEEEEEecEEEeCCCCcccc
Q 018503          183 VFDES---------------------SPSGNDY-LAEVCREWEGTALKVN-------KDVRLALIRIGIVLGKDGGALAK  233 (355)
Q Consensus       183 ~~~e~---------------------~~~~~~y-~~k~~~~~~~~~~~~~-------~~~~~~i~Rp~~i~G~~~~~~~~  233 (355)
                      .++|+                     ..+...| .+|...+.+...+..+       .+++++.++||.+.++....   
T Consensus       161 ~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~~~i~v~~v~PG~v~t~~~~~---  237 (276)
T 1wma_A          161 TITEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAGP---  237 (276)
T ss_dssp             SCCHHHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCSTTTCT---
T ss_pred             ccchhhhhhhhhhhhhhhcccccccCCCccchhHHHHHHHHHHHHHHHHHhhcccCCCceEEEEecCCccccCcCCc---
Confidence            01110                     1123678 7887766665544432       58999999999987764211   


Q ss_pred             hHHHHHHHhCCCCCCCCcceecccHHHHHHHHHHHHhCC
Q 018503          234 MIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNP  272 (355)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~  272 (355)
                                         ..+.+.+|+|++++.++..+
T Consensus       238 -------------------~~~~~~~~~a~~~~~l~~~~  257 (276)
T 1wma_A          238 -------------------KATKSPEEGAETPVYLALLP  257 (276)
T ss_dssp             -------------------TCSBCHHHHTHHHHHHHSCC
T ss_pred             -------------------cccCChhHhhhhHhhhhcCc
Confidence                               13689999999999999854

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*

Probab=99.78  E-value=1.7e-18  Score=148.56  Aligned_cols=215  Identities=13%  Similarity=0.033  Sum_probs=141.5

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhc-------CCCcEEEEC
Q 018503           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCI-------QGSTAVVNL  123 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~-------~~~d~vi~~  123 (355)
                      ++++||||+|+||++++++|+++|++|++++|+.+........ . .....+...|.+++.+++       .++|++||+
T Consensus         2 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l-~-~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lv~n   79 (254)
T 1zmt_A            2 STAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAF-A-ETYPQLKPMSEQEPAELIEAVTSAYGQVDVLVSN   79 (254)
T ss_dssp             CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHH-H-HHCTTSEECCCCSHHHHHHHHHHHHSCCCEEEEE
T ss_pred             eEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH-H-hcCCcEEEECHHHHHHHHHHHHHHhCCCCEEEEC
Confidence            5799999999999999999999999999999987654322110 0 000011112666665554       378999999


Q ss_pred             CCCC-CC---CCCChhhHHHHHHHhhhhHHHHHHHHHcC--CCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCChh-HH
Q 018503          124 AGTP-IG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-LA  196 (355)
Q Consensus       124 a~~~-~~---~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~~y-~~  196 (355)
                      ||.. ..   ...+.+.+...+++|+.++..+++++...  ..+.+++|++||...  +..         .+....| .+
T Consensus        80 Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~--~~~---------~~~~~~Y~~s  148 (254)
T 1zmt_A           80 DIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATP--FGP---------WKELSTYTSA  148 (254)
T ss_dssp             CCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTT--TSC---------CTTCHHHHHH
T ss_pred             CCcCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCccc--ccC---------CCCchHHHHH
Confidence            9975 22   23456677889999999999988877421  035679999999765  321         1234567 77


Q ss_pred             HHHHHHHHHHhccC---CCCeEEEEEecEEEeCCCCccc--chH---H-HH-HHHhCCCCCCCCcceecccHHHHHHHHH
Q 018503          197 EVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALA--KMI---P-LF-MMFAGGPLGSGQQWFSWIHLDDIVNLIY  266 (355)
Q Consensus       197 k~~~~~~~~~~~~~---~~~~~~i~Rp~~i~G~~~~~~~--~~~---~-~~-~~~~~~~~~~~~~~~~~i~v~Dva~~~~  266 (355)
                      |...+.+.+.+..+   .|++++.++||.++|+....+.  .+.   + .. ......+.      ..+.+.+|+|++++
T Consensus       149 K~a~~~~~~~la~e~~~~gi~v~~v~PG~v~~~~~~~~~~T~~~~~~~~~~~~~~~~~p~------~~~~~p~dvA~~v~  222 (254)
T 1zmt_A          149 RAGACTLANALSKELGEYNIPVFAIGPNYLHSEDSPYFYPTEPWKTNPEHVAHVKKVTAL------QRLGTQKELGELVA  222 (254)
T ss_dssp             HHHHHHHHHHHHHHHGGGTCCEEEEEESSBCCBTCCSSCBHHHHTTCHHHHHHHHHHSSS------SSCBCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhhhcCcEEEEEecCccccccccccCCCcccccChHHHHHHhccCCC------CCCcCHHHHHHHHH
Confidence            77666655544332   4899999999999887532211  010   0 00 11111111      13688999999999


Q ss_pred             HHHhCCC---CCCceEecCCC
Q 018503          267 EALSNPS---YRGVINGTAPN  284 (355)
Q Consensus       267 ~~~~~~~---~~~~~~i~~~~  284 (355)
                      .++..+.   .+..+++.+|.
T Consensus       223 ~l~s~~~~~~tG~~~~vdgG~  243 (254)
T 1zmt_A          223 FLASGSCDYLTGQVFWLAGGF  243 (254)
T ss_dssp             HHHTTSCGGGTTCEEEESTTC
T ss_pred             HHhCcccCCccCCEEEECCCc
Confidence            9998654   45578887775

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}

Probab=99.78  E-value=3e-18  Score=148.23  Aligned_cols=206  Identities=12%  Similarity=0.046  Sum_probs=135.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCC-CCCccCCCeeecCCcchhhhcC-------CCcEE
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-KKTRFFPGVMIAEEPQWRDCIQ-------GSTAV  120 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~-------~~d~v  120 (355)
                      +++++|||||+|+||++++++|+++|++|++++|+.+........ ........+|+.|++++.++++       ++|++
T Consensus        27 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l  106 (272)
T 4dyv_A           27 GKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEIGDDALCVPTDVTDPDSVRALFTATVEKFGRVDVL  106 (272)
T ss_dssp             -CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTSCCEEEECCTTSHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            457899999999999999999999999999999987654432111 0001134579999988877764       79999


Q ss_pred             EECCCCCCC----CCCChhhHHHHHHHhhhhHHHHHHHHHcC--CCC--CCcEEEEeeeeeeeeCCCCCccccCCCCCCC
Q 018503          121 VNLAGTPIG----TRWSSEIKKEIKESRIRVTSKVVDLINES--PEG--VRPSVLVSATALGYYGTSETEVFDESSPSGN  192 (355)
Q Consensus       121 i~~a~~~~~----~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~--~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~  192 (355)
                      ||+||....    ...+.+.+...+++|+.++..+++++...  ..+  ..++|++||...  +..         .+...
T Consensus       107 VnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~--~~~---------~~~~~  175 (272)
T 4dyv_A          107 FNNAGTGAPAIPMEDLTFAQWKQVVDTNLTGPFLCTQEAFRVMKAQEPRGGRIINNGSISA--TSP---------RPYSA  175 (272)
T ss_dssp             EECCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCSST--TSC---------CTTCH
T ss_pred             EECCCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCCcEEEEECchhh--cCC---------CCCch
Confidence            999997422    23466778899999999988887766431  022  468999999765  321         22345


Q ss_pred             hh-HHHHHHHHHHHHhccC---CCCeEEEEEecEEEeCCCCcccchHHHHHHHhCCCCCCCCcceecccHHHHHHHHHHH
Q 018503          193 DY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEA  268 (355)
Q Consensus       193 ~y-~~k~~~~~~~~~~~~~---~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~  268 (355)
                      .| .+|...+.+.+.+..+   .++++..++||.+..+..........  ...      .......+...+|+|++++.+
T Consensus       176 ~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~--~~~------~~~~~~~~~~pedvA~~v~fL  247 (272)
T 4dyv_A          176 PYTATKHAITGLTKSTSLDGRVHDIACGQIDIGNADTPMAQKMKAGVP--QAD------LSIKVEPVMDVAHVASAVVYM  247 (272)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEEECC--------------------------------CHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhCccCEEEEEEEECcccChhhhhhcccch--hhh------hcccccCCCCHHHHHHHHHHH
Confidence            67 7787766665554433   48999999999998764322110000  000      011223478999999999999


Q ss_pred             HhCCC
Q 018503          269 LSNPS  273 (355)
Q Consensus       269 ~~~~~  273 (355)
                      +..+.
T Consensus       248 ~s~~~  252 (272)
T 4dyv_A          248 ASLPL  252 (272)
T ss_dssp             HHSCT
T ss_pred             hCCCC
Confidence            99876

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*

Probab=99.78  E-value=3e-18  Score=147.90  Aligned_cols=219  Identities=17%  Similarity=0.031  Sum_probs=148.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCC------CCCccCCCeeecCCcchhhhcC-------
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG------KKTRFFPGVMIAEEPQWRDCIQ-------  115 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~------~~~~~~~~~d~~~~~~~~~~~~-------  115 (355)
                      ..++++||||+|.||++++++|+++|++|++++|+.+........      ........+|+.|.+++.++++       
T Consensus         7 ~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   86 (265)
T 3lf2_A            7 SEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEACERTLG   86 (265)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHHHHHHcC
Confidence            357899999999999999999999999999999987654322110      0001133478888887776653       


Q ss_pred             CCcEEEECCCCCCC---CCCChhhHHHHHHHhhhhHHHHHHHHHcC--CCCCCcEEEEeeeeeeeeCCCCCccccCCCCC
Q 018503          116 GSTAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPS  190 (355)
Q Consensus       116 ~~d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~  190 (355)
                      ++|++||+||....   ...+.+.+...+++|+.++..+++++...  ..+..++|++||...  +..         .+.
T Consensus        87 ~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~--~~~---------~~~  155 (265)
T 3lf2_A           87 CASILVNNAGQGRVSTFAETTDEAWSEELQLKFFSVIHPVRAFLPQLESRADAAIVCVNSLLA--SQP---------EPH  155 (265)
T ss_dssp             SCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTEEEEEEEEGGG--TSC---------CTT
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeEEEEECCccc--CCC---------CCC
Confidence            68999999997533   24456778899999999999999887431  135668999999766  321         123


Q ss_pred             CChh-HHHHHHHHHHHHhccC---CCCeEEEEEecEEEeCCCCcc-----------cchHHHHHHHhCCCCCCCCcceec
Q 018503          191 GNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGAL-----------AKMIPLFMMFAGGPLGSGQQWFSW  255 (355)
Q Consensus       191 ~~~y-~~k~~~~~~~~~~~~~---~~~~~~i~Rp~~i~G~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~  255 (355)
                      ...| .+|...+.+.+.+..+   .|+++..++||.+.++.....           ..+..........++      ..+
T Consensus       156 ~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~------~r~  229 (265)
T 3lf2_A          156 MVATSAARAGVKNLVRSMAFEFAPKGVRVNGILIGLVESGQWRRRFEAREERELDWAQWTAQLARNKQIPL------GRL  229 (265)
T ss_dssp             BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHTC------CHHHHHHHHHHHTTCTT------CSC
T ss_pred             chhhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCcCchhhhhhhhhhhhccCHHHHHHHHhhccCCCc------CCC
Confidence            4567 7777666655544433   489999999999987531100           001111111111222      247


Q ss_pred             ccHHHHHHHHHHHHhCCC---CCCceEecCCC
Q 018503          256 IHLDDIVNLIYEALSNPS---YRGVINGTAPN  284 (355)
Q Consensus       256 i~v~Dva~~~~~~~~~~~---~~~~~~i~~~~  284 (355)
                      ...+|+|++++.++....   .+..+++.+|.
T Consensus       230 ~~pedvA~~v~fL~s~~~~~itG~~i~vdGG~  261 (265)
T 3lf2_A          230 GKPIEAARAILFLASPLSAYTTGSHIDVSGGL  261 (265)
T ss_dssp             BCHHHHHHHHHHHHSGGGTTCCSEEEEESSSC
T ss_pred             cCHHHHHHHHHHHhCchhcCcCCCEEEECCCC
Confidence            889999999999997543   34478887775

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}

Probab=99.78  E-value=1.8e-18  Score=150.65  Aligned_cols=221  Identities=16%  Similarity=0.089  Sum_probs=149.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCC-CCCccCCCeeecCCcchhhhcC------CCcEEE
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-KKTRFFPGVMIAEEPQWRDCIQ------GSTAVV  121 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~------~~d~vi  121 (355)
                      .+++++||||+|+||++++++|+++|++|++++|+.+........ ........+|+.|.+++.++++      ++|++|
T Consensus        29 ~~k~vlVTGas~GIG~aia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~id~lv  108 (281)
T 3ppi_A           29 EGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADELGNRAEFVSTNVTSEDSVLAAIEAANQLGRLRYAV  108 (281)
T ss_dssp             TTEEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHTTSSEEEEEE
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHhCCCCeEE
Confidence            346899999999999999999999999999999987664433211 0011144578889888877664      579999


Q ss_pred             EC-CCCCCC--------CCCChhhHHHHHHHhhhhHHHHHHHHHcC--C------CCCCcEEEEeeeeeeeeCCCCCccc
Q 018503          122 NL-AGTPIG--------TRWSSEIKKEIKESRIRVTSKVVDLINES--P------EGVRPSVLVSATALGYYGTSETEVF  184 (355)
Q Consensus       122 ~~-a~~~~~--------~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~------~~~~~~v~~Ss~~~~~yg~~~~~~~  184 (355)
                      |+ |+....        .....+.+...+++|+.++.++++++...  .      .+..++|++||...  +..      
T Consensus       109 ~~aag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~g~iv~isS~~~--~~~------  180 (281)
T 3ppi_A          109 VAHGGFGVAQRIVQRDGSPADMGGFTKTIDLYLNGTYNVARLVAASIAAAEPRENGERGALVLTASIAG--YEG------  180 (281)
T ss_dssp             ECCCCCCCCCCSBCTTSCBCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCCCTTSCCEEEEEECCGGG--TSC------
T ss_pred             EccCcccccccccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcccccCCCeEEEEEecccc--cCC------
Confidence            99 544221        13455667899999999999998877531  0      24458999999876  321      


Q ss_pred             cCCCCCCChh-HHHHHHHHHHHHhccC---CCCeEEEEEecEEEeCCCCcc-cchHHHHHHHhCCCCCCCCcceecccHH
Q 018503          185 DESSPSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGAL-AKMIPLFMMFAGGPLGSGQQWFSWIHLD  259 (355)
Q Consensus       185 ~e~~~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~i~Rp~~i~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~v~  259 (355)
                         .+....| .+|...+.+.+.+..+   .|+++..++||.+..+..... .....  ......+.     ...+.+.+
T Consensus       181 ---~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~--~~~~~~~~-----~~~~~~pe  250 (281)
T 3ppi_A          181 ---QIGQTAYAAAKAGVIGLTIAAARDLSSAGIRVNTIAPGTMKTPIMESVGEEALA--KFAANIPF-----PKRLGTPD  250 (281)
T ss_dssp             ---CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTTCHHHHH--HHHHTCCS-----SSSCBCHH
T ss_pred             ---CCCCcccHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCCchhhhcccHHHHH--HHHhcCCC-----CCCCCCHH
Confidence               2234567 7787666555444332   489999999999876532111 01111  12222221     13478999


Q ss_pred             HHHHHHHHHHhCCCC-CCceEecCCCccC
Q 018503          260 DIVNLIYEALSNPSY-RGVINGTAPNPVR  287 (355)
Q Consensus       260 Dva~~~~~~~~~~~~-~~~~~i~~~~~~s  287 (355)
                      |+|++++.++..... +..+++.+|..++
T Consensus       251 dvA~~v~~l~s~~~~tG~~i~vdGG~~~~  279 (281)
T 3ppi_A          251 EFADAAAFLLTNGYINGEVMRLDGAQRFT  279 (281)
T ss_dssp             HHHHHHHHHHHCSSCCSCEEEESTTCCCC
T ss_pred             HHHHHHHHHHcCCCcCCcEEEECCCcccC
Confidence            999999999987553 4588888887554

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*

Probab=99.78  E-value=2.4e-18  Score=146.89  Aligned_cols=208  Identities=15%  Similarity=0.108  Sum_probs=139.3

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCC----CCCCccCCCeeecCCcchhhhcC-------C
Q 018503           48 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP----GKKTRFFPGVMIAEEPQWRDCIQ-------G  116 (355)
Q Consensus        48 ~~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~~d~~~~~~~~~~~~-------~  116 (355)
                      .++++++||||+|+||++++++|+++|++|++++|+.+.......    .........+|+.|++++.++++       +
T Consensus         5 l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~   84 (247)
T 2jah_A            5 LQGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGAKVHVLELDVADRQGVDAAVASTVEALGG   84 (247)
T ss_dssp             TTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            345799999999999999999999999999999998765432211    01111134578889888776664       7


Q ss_pred             CcEEEECCCCCCC---CCCChhhHHHHHHHhhhhHHHHHHHHHcC--CCCCCcEEEEeeeeeeeeCCCCCccccCCCCCC
Q 018503          117 STAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSG  191 (355)
Q Consensus       117 ~d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~  191 (355)
                      +|++||+||....   ...+.+.+...+++|+.++.++++++...  ..+ +++|++||...  +..         .+..
T Consensus        85 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~--~~~---------~~~~  152 (247)
T 2jah_A           85 LDILVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLMYMTRAALPHLLRSK-GTVVQMSSIAG--RVN---------VRNA  152 (247)
T ss_dssp             CSEEEECCCCCCCCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGG--TCC---------CTTC
T ss_pred             CCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCC-CEEEEEccHHh--cCC---------CCCC
Confidence            9999999997532   23356677889999999999998877431  124 79999999765  321         1234


Q ss_pred             Chh-HHHHHHHHHHHHhcc---CCCCeEEEEEecEEEeCCCCcccchHHHHHHHhCCCCCCCCcceecccHHHHHHHHHH
Q 018503          192 NDY-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYE  267 (355)
Q Consensus       192 ~~y-~~k~~~~~~~~~~~~---~~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~  267 (355)
                      ..| .+|...+.+.+.+..   ..|++++.++||.+..+....... ..........+ +    ...++..+|+|++++.
T Consensus       153 ~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~-~~~~~~~~~~~-~----~~~~~~pedvA~~v~~  226 (247)
T 2jah_A          153 AVYQATKFGVNAFSETLRQEVTERGVRVVVIEPGTTDTELRGHITH-TATKEMYEQRI-S----QIRKLQAQDIAEAVRY  226 (247)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBSSSGGGGCCC-HHHHHHHHHHT-T----TSCCBCHHHHHHHHHH
T ss_pred             cHHHHHHHHHHHHHHHHHHHhcccCcEEEEEECCCCCCcchhcccc-hhhHHHHHhcc-c----ccCCCCHHHHHHHHHH
Confidence            467 777655555444332   358999999999998764221110 00001111101 1    1125899999999999


Q ss_pred             HHhCCC
Q 018503          268 ALSNPS  273 (355)
Q Consensus       268 ~~~~~~  273 (355)
                      ++..+.
T Consensus       227 l~s~~~  232 (247)
T 2jah_A          227 AVTAPH  232 (247)
T ss_dssp             HHHSCT
T ss_pred             HhCCCc
Confidence            998754

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2

Probab=99.78  E-value=3.6e-19  Score=154.34  Aligned_cols=198  Identities=12%  Similarity=-0.024  Sum_probs=136.7

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCC----CCCCccCCCeeecCCcchhhhcC-------C
Q 018503           48 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP----GKKTRFFPGVMIAEEPQWRDCIQ-------G  116 (355)
Q Consensus        48 ~~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~~d~~~~~~~~~~~~-------~  116 (355)
                      .++++|+||||+|+||++++++|+++|++|++++|+.+.......    .........+|+.|.+++.++++       +
T Consensus        29 l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~  108 (272)
T 1yb1_A           29 VTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEIGD  108 (272)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCC
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhcCCeEEEEEeeCCCHHHHHHHHHHHHHHCCC
Confidence            345799999999999999999999999999999998765432211    00011134578888887776664       7


Q ss_pred             CcEEEECCCCCCCCC---CChhhHHHHHHHhhhhHHHHHHHHHcC--CCCCCcEEEEeeeeeeeeCCCCCccccCCCCCC
Q 018503          117 STAVVNLAGTPIGTR---WSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSG  191 (355)
Q Consensus       117 ~d~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~  191 (355)
                      +|+|||+||......   ...+.....+++|+.++.++++++...  ..+.+++|++||...  +...         +..
T Consensus       109 iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~--~~~~---------~~~  177 (272)
T 1yb1_A          109 VSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAG--HVSV---------PFL  177 (272)
T ss_dssp             CSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC---CCCH---------HHH
T ss_pred             CcEEEECCCcCCCcchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEechhh--cCCC---------CCc
Confidence            899999999753322   234556788999999987777665321  146789999999876  4311         122


Q ss_pred             Chh-HHHHHHHHHHHHhcc------CCCCeEEEEEecEEEeCCCCcccchHHHHHHHhCCCCCCCCcceecccHHHHHHH
Q 018503          192 NDY-LAEVCREWEGTALKV------NKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNL  264 (355)
Q Consensus       192 ~~y-~~k~~~~~~~~~~~~------~~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~  264 (355)
                      ..| .+|...+.+.+.+..      ..++++++++|+.+.++....  ..               .....+++.+|+|++
T Consensus       178 ~~Y~~sK~a~~~l~~~la~e~~~~~~~gi~v~~v~Pg~v~t~~~~~--~~---------------~~~~~~~~~~dva~~  240 (272)
T 1yb1_A          178 LAYCSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIKN--PS---------------TSLGPTLEPEEVVNR  240 (272)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTTC--TH---------------HHHCCCCCHHHHHHH
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCcccCCcccc--cc---------------ccccCCCCHHHHHHH
Confidence            457 677666655554433      348999999999988764221  00               011347899999999


Q ss_pred             HHHHHhCCC
Q 018503          265 IYEALSNPS  273 (355)
Q Consensus       265 ~~~~~~~~~  273 (355)
                      ++.++..+.
T Consensus       241 i~~~~~~~~  249 (272)
T 1yb1_A          241 LMHGILTEQ  249 (272)
T ss_dssp             HHHHHHTTC
T ss_pred             HHHHHHcCC
Confidence            999998764

>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}

Probab=99.77  E-value=4.3e-19  Score=153.85  Aligned_cols=219  Identities=12%  Similarity=-0.026  Sum_probs=147.3

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCC----CCCCccCCCeeecCCcchhhhcC------CC
Q 018503           48 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP----GKKTRFFPGVMIAEEPQWRDCIQ------GS  117 (355)
Q Consensus        48 ~~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~~d~~~~~~~~~~~~------~~  117 (355)
                      ..+++++||||+|+||++++++|+++|++|++++|+.+.......    .........+|+.|.+++.++++      ++
T Consensus        31 l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~g~i  110 (275)
T 4imr_A           31 LRGRTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIASGGTAQELAGDLSEAGAGTDLIERAEAIAPV  110 (275)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHTTCCEEEEECCTTSTTHHHHHHHHHHHHSCC
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHhCCC
Confidence            345799999999999999999999999999999998765433211    01111134578889888877664      78


Q ss_pred             cEEEECCCCCCC---CCCChhhHHHHHHHhhhhHHHHHHHHHcC--CCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCC
Q 018503          118 TAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGN  192 (355)
Q Consensus       118 d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~  192 (355)
                      |++||+||....   ...+.+.+...+++|+.++.++++++...  ..+..++|++||...  +.         ..+...
T Consensus       111 D~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~--~~---------~~~~~~  179 (275)
T 4imr_A          111 DILVINASAQINATLSALTPNDLAFQLAVNLGSTVDMLQSALPKMVARKWGRVVSIGSINQ--LR---------PKSVVT  179 (275)
T ss_dssp             CEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGG--TS---------CCTTBH
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHh--CC---------CCCCch
Confidence            999999997433   23456777889999999999998887321  035678999999766  32         112234


Q ss_pred             hh-HHHHHHHHHHHHhccC---CCCeEEEEEecEEEeCCCCcccc-hHHHH-HHHhCC-CCCCCCcceecccHHHHHHHH
Q 018503          193 DY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAK-MIPLF-MMFAGG-PLGSGQQWFSWIHLDDIVNLI  265 (355)
Q Consensus       193 ~y-~~k~~~~~~~~~~~~~---~~~~~~i~Rp~~i~G~~~~~~~~-~~~~~-~~~~~~-~~~~~~~~~~~i~v~Dva~~~  265 (355)
                      .| .+|...+.+.+.+..+   .|+++..++||.+..+....... ..... ...... ++      ..+...+|+|+++
T Consensus       180 ~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~p~------~r~~~pedvA~~v  253 (275)
T 4imr_A          180 AYAATKAAQHNLIQSQARDFAGDNVLLNTLAPGLVDTDRNADRRAQDPEGWDEYVRTLNWM------GRAGRPEEMVGAA  253 (275)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSHHHHHHHHHCHHHHHHHHHHHSTT------CSCBCGGGGHHHH
T ss_pred             hhHHHHHHHHHHHHHHHHHhcccCcEEEEEEeccccCcccccccccChHHHHHHHhhcCcc------CCCcCHHHHHHHH
Confidence            58 7787666665554443   38999999999997753211000 00001 111111 21      1357789999999


Q ss_pred             HHHHhCCC---CCCceEecCC
Q 018503          266 YEALSNPS---YRGVINGTAP  283 (355)
Q Consensus       266 ~~~~~~~~---~~~~~~i~~~  283 (355)
                      +.++....   .+..+++.+|
T Consensus       254 ~fL~s~~a~~itG~~i~vdGG  274 (275)
T 4imr_A          254 LFLASEACSFMTGETIFLTGG  274 (275)
T ss_dssp             HHHHSGGGTTCCSCEEEESSC
T ss_pred             HHHcCcccCCCCCCEEEeCCC
Confidence            99998643   3557777765

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2

Probab=99.77  E-value=6.9e-18  Score=149.92  Aligned_cols=218  Identities=12%  Similarity=0.048  Sum_probs=146.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEe-cCCchhhccCC-----CCCCccCCCeeecCCc--------------
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLT-RSRSKAELIFP-----GKKTRFFPGVMIAEEP--------------  108 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~-r~~~~~~~~~~-----~~~~~~~~~~d~~~~~--------------  108 (355)
                      +.++||||||+|+||+++++.|+++|++|++++ |+.+.......     .........+|+.|.+              
T Consensus        45 ~~k~~lVTGas~GIG~aia~~La~~G~~Vv~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~  124 (328)
T 2qhx_A           45 TVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPVT  124 (328)
T ss_dssp             CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCC-------CCBC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCeEEEEEeeCCCchhccccccccccccc
Confidence            457899999999999999999999999999999 87654332111     0011113457888888              


Q ss_pred             ---chhhhcC-------CCcEEEECCCCCCCC---CCC--------------hhhHHHHHHHhhhhHHHHHHHHHcC--C
Q 018503          109 ---QWRDCIQ-------GSTAVVNLAGTPIGT---RWS--------------SEIKKEIKESRIRVTSKVVDLINES--P  159 (355)
Q Consensus       109 ---~~~~~~~-------~~d~vi~~a~~~~~~---~~~--------------~~~~~~~~~~n~~~~~~l~~a~~~~--~  159 (355)
                         ++.++++       .+|++||+||.....   ...              .+.+...+++|+.++..+++++...  .
T Consensus       125 ~~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~  204 (328)
T 2qhx_A          125 LFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAG  204 (328)
T ss_dssp             HHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSCC-------------CHHHHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred             cHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence               7776664       789999999975322   223              5566788999999999988876531  1


Q ss_pred             CC------CCcEEEEeeeeeeeeCCCCCccccCCCCCCChh-HHHHHHHHHHHHhccC---CCCeEEEEEecEEEeCCCC
Q 018503          160 EG------VRPSVLVSATALGYYGTSETEVFDESSPSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGG  229 (355)
Q Consensus       160 ~~------~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~i~Rp~~i~G~~~~  229 (355)
                      .+      .+++|++||...  +..         .+....| .+|...+.+...+..+   .|++++.++||.+..+. .
T Consensus       205 ~~~~~~~~~g~IV~isS~~~--~~~---------~~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~-~  272 (328)
T 2qhx_A          205 TPAKHRGTNYSIINMVDAMT--NQP---------LLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVD-D  272 (328)
T ss_dssp             SCGGGSCSCEEEEEECCTTT--TSC---------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCCC-C
T ss_pred             cCCcCCCCCcEEEEECchhh--ccC---------CCCcHHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCCc-c
Confidence            23      578999999765  321         1234567 7777666655544332   48999999999998876 2


Q ss_pred             cccchHHHHHHHhCCCCCCCCcceecccHHHHHHHHHHHHhCCC---CCCceEecCCCc
Q 018503          230 ALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPS---YRGVINGTAPNP  285 (355)
Q Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~---~~~~~~i~~~~~  285 (355)
                      .......  ......+++     ..+...+|+|++++.++....   .+..+++.+|..
T Consensus       273 ~~~~~~~--~~~~~~p~~-----~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdGG~~  324 (328)
T 2qhx_A          273 MPPAVWE--GHRSKVPLY-----QRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYS  324 (328)
T ss_dssp             SCHHHHH--HHHTTCTTT-----TSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             ccHHHHH--HHHhhCCCC-----CCCCCHHHHHHHHHHHhCccccCccCcEEEECCCcc
Confidence            2211111  112222221     036789999999999997432   345788877753

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}

Probab=99.77  E-value=2.8e-18  Score=144.96  Aligned_cols=197  Identities=16%  Similarity=0.137  Sum_probs=135.6

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCC-CCccCCCeeecCCcchhhhcCCC----cEEEECCC
Q 018503           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGK-KTRFFPGVMIAEEPQWRDCIQGS----TAVVNLAG  125 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~~~~----d~vi~~a~  125 (355)
                      ++||||||+|+||++++++|+++|++|++++|+.+......... .......+|+.+.+++.++++.+    |++||+||
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~d~lv~~Ag   81 (230)
T 3guy_A            2 SLIVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCLSNNVGYRARDLASHQEVEQLFEQLDSIPSTVVHSAG   81 (230)
T ss_dssp             -CEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTCSSCCCEEECCTTCHHHHHHHHHSCSSCCSEEEECCC
T ss_pred             CEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhccCeEeecCCCHHHHHHHHHHHhhcCCEEEEeCC
Confidence            57999999999999999999999999999999987654432211 11114457899999888877543    99999999


Q ss_pred             CCCC---CCCChhhHHHHHHHhhhhHHHHHHHHHcC-CCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCChh-HHHHHH
Q 018503          126 TPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES-PEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-LAEVCR  200 (355)
Q Consensus       126 ~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~~y-~~k~~~  200 (355)
                      ....   ...+.+.+...+++|+.++.++++++... .....++|++||...  +..         .+....| .+|...
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~iv~isS~~~--~~~---------~~~~~~Y~asKaa~  150 (230)
T 3guy_A           82 SGYFGLLQEQDPEQIQTLIENNLSSAINVLRELVKRYKDQPVNVVMIMSTAA--QQP---------KAQESTYCAVKWAV  150 (230)
T ss_dssp             CCCCSCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCEEEEECCGGG--TSC---------CTTCHHHHHHHHHH
T ss_pred             cCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeeccc--CCC---------CCCCchhHHHHHHH
Confidence            7533   23456777889999999999999877542 122238999999876  321         2234567 788777


Q ss_pred             HHHHHHhccC---CCCeEEEEEecEEEeCCCCcccchHHHHHHHhCCCCCCCCcceecccHHHHHHHHHHHHhCCC
Q 018503          201 EWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPS  273 (355)
Q Consensus       201 ~~~~~~~~~~---~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~  273 (355)
                      +.+.+.+..+   .|+++..++||.+..+.......               ......+.+.+|+|++++.++..+.
T Consensus       151 ~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~---------------~~~~~~~~~~~dvA~~i~~l~~~~~  211 (230)
T 3guy_A          151 KGLIESVRLELKGKPMKIIAVYPGGMATEFWETSGK---------------SLDTSSFMSAEDAALMIHGALANIG  211 (230)
T ss_dssp             HHHHHHHHHHTTTSSCEEEEEEECCC-------------------------------CCCHHHHHHHHHHHCCEET
T ss_pred             HHHHHHHHHHHHhcCeEEEEEECCcccChHHHhcCC---------------CCCcccCCCHHHHHHHHHHHHhCcC
Confidence            7666655443   48999999999987763211100               0112357899999999999998654

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}

Probab=99.77  E-value=8e-19  Score=152.66  Aligned_cols=210  Identities=13%  Similarity=0.024  Sum_probs=139.4

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCC-----CCCccCCCeeecCCcchhhhcC-------
Q 018503           48 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-----KKTRFFPGVMIAEEPQWRDCIQ-------  115 (355)
Q Consensus        48 ~~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-----~~~~~~~~~d~~~~~~~~~~~~-------  115 (355)
                      ..++++|||||+|+||++++++|+++|++|++++|+.+........     ........+|+.|.+++.++++       
T Consensus        31 l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  110 (281)
T 4dry_A           31 GEGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRTGNIVRAVVCDVGDPDQVAALFAAVRAEFA  110 (281)
T ss_dssp             ---CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            3567999999999999999999999999999999987654332111     0000134579999888776663       


Q ss_pred             CCcEEEECCCCCCC----CCCChhhHHHHHHHhhhhHHHHHHHHHcC--CC--CCCcEEEEeeeeeeeeCCCCCccccCC
Q 018503          116 GSTAVVNLAGTPIG----TRWSSEIKKEIKESRIRVTSKVVDLINES--PE--GVRPSVLVSATALGYYGTSETEVFDES  187 (355)
Q Consensus       116 ~~d~vi~~a~~~~~----~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~--~~~~~v~~Ss~~~~~yg~~~~~~~~e~  187 (355)
                      ++|++|||||....    .....+.+...+++|+.++..+++++...  ..  ...++|++||...  +..         
T Consensus       111 ~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~--~~~---------  179 (281)
T 4dry_A          111 RLDLLVNNAGSNVPPVPLEEVTFEQWNGIVAANLTGAFLCTQHAFRMMKAQTPRGGRIINNGSISA--QTP---------  179 (281)
T ss_dssp             CCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCGGG--TCC---------
T ss_pred             CCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCcEEEEECCHHh--CCC---------
Confidence            68999999997422    23466778889999999988887766431  02  2468999999765  221         


Q ss_pred             CCCCChh-HHHHHHHHHHHHhcc---CCCCeEEEEEecEEEeCCCCcccchHHHHHHHhCCCCCCCCcceecccHHHHHH
Q 018503          188 SPSGNDY-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVN  263 (355)
Q Consensus       188 ~~~~~~y-~~k~~~~~~~~~~~~---~~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~  263 (355)
                      .+....| .+|...+.+.+.+..   ..|+++..++||.+..+........       .... ........++..+|+|+
T Consensus       180 ~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~-------~~~~-~~~~~~~~~~~pedvA~  251 (281)
T 4dry_A          180 RPNSAPYTATKHAITGLTKSTALDGRMHDIACGQIDIGNAATDMTARMSTG-------VLQA-NGEVAAEPTIPIEHIAE  251 (281)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEECBCC-------CE-------EECT-TSCEEECCCBCHHHHHH
T ss_pred             CCCChhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECcCcChhhhhhcch-------hhhh-hhcccccCCCCHHHHHH
Confidence            2234567 778766666554443   2589999999999877642111000       0000 00111234789999999


Q ss_pred             HHHHHHhCCCCCC
Q 018503          264 LIYEALSNPSYRG  276 (355)
Q Consensus       264 ~~~~~~~~~~~~~  276 (355)
                      +++.++..+....
T Consensus       252 ~v~fL~s~~~~~~  264 (281)
T 4dry_A          252 AVVYMASLPLSAN  264 (281)
T ss_dssp             HHHHHHHSCTTEE
T ss_pred             HHHHHhCCCccCc
Confidence            9999999876433

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}

Probab=99.77  E-value=2.8e-18  Score=149.51  Aligned_cols=217  Identities=16%  Similarity=0.163  Sum_probs=149.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCC---eEEEEecCCchhhccCCC------CCCccCCCeeecCCcchhhhcC----
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNH---QVRVLTRSRSKAELIFPG------KKTRFFPGVMIAEEPQWRDCIQ----  115 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~~~~~~------~~~~~~~~~d~~~~~~~~~~~~----  115 (355)
                      .++++|||||+|+||++++++|++.|+   +|++++|+.+........      ........+|+.|.+++.++++    
T Consensus        32 ~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~  111 (287)
T 3rku_A           32 AKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQAEKIKPFIENLPQ  111 (287)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTTCGGGHHHHHHTSCG
T ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence            457999999999999999999999987   999999987654432110      1111134579999998887764    


Q ss_pred             ---CCcEEEECCCCCCC----CCCChhhHHHHHHHhhhhHHHHHHHHHcC--CCCCCcEEEEeeeeeeeeCCCCCccccC
Q 018503          116 ---GSTAVVNLAGTPIG----TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDE  186 (355)
Q Consensus       116 ---~~d~vi~~a~~~~~----~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~~~~v~~Ss~~~~~yg~~~~~~~~e  186 (355)
                         ++|++||+||....    .....+.+...+++|+.++..+++++...  ..+..++|++||...  +..        
T Consensus       112 ~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~--~~~--------  181 (287)
T 3rku_A          112 EFKDIDILVNNAGKALGSDRVGQIATEDIQDVFDTNVTALINITQAVLPIFQAKNSGDIVNLGSIAG--RDA--------  181 (287)
T ss_dssp             GGCSCCEEEECCCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGG--TSC--------
T ss_pred             hcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEECChhh--cCC--------
Confidence               58999999997431    23466778899999999999999887321  035678999999765  321        


Q ss_pred             CCCCCChh-HHHHHHHHHHHHhccC---CCCeEEEEEecEEEeCCCC-cccchHHHH-HHHhCCCCCCCCcceecccHHH
Q 018503          187 SSPSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGG-ALAKMIPLF-MMFAGGPLGSGQQWFSWIHLDD  260 (355)
Q Consensus       187 ~~~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~i~Rp~~i~G~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~i~v~D  260 (355)
                       .+....| .+|...+.+.+.+..+   .|++++.++||.+..+... ......... .....         ..++..+|
T Consensus       182 -~~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~---------~~p~~ped  251 (287)
T 3rku_A          182 -YPTGSIYCASKFAVGAFTDSLRKELINTKIRVILIAPGLVETEFSLVRYRGNEEQAKNVYKD---------TTPLMADD  251 (287)
T ss_dssp             -CTTCHHHHHHHHHHHHHHHHHHHHTTTSSCEEEEEEESCEESSHHHHHTTTCHHHHHHHHTT---------SCCEEHHH
T ss_pred             -CCCCchHHHHHHHHHHHHHHHHHHhhhcCCEEEEEeCCcCcCccccccccCcHHHHHHhhcc---------cCCCCHHH
Confidence             2234567 7787776666655543   5899999999999876310 000000111 11111         12348999


Q ss_pred             HHHHHHHHHhCCC---CCCceEecCCCc
Q 018503          261 IVNLIYEALSNPS---YRGVINGTAPNP  285 (355)
Q Consensus       261 va~~~~~~~~~~~---~~~~~~i~~~~~  285 (355)
                      +|++++.++..+.   .++++.+.++++
T Consensus       252 vA~~v~~l~s~~~~~i~g~~i~v~~g~~  279 (287)
T 3rku_A          252 VADLIVYATSRKQNTVIADTLIFPTNQA  279 (287)
T ss_dssp             HHHHHHHHHTSCTTEEEEEEEEEETTEE
T ss_pred             HHHHHHHHhCCCCCeEecceEEeeCCCC
Confidence            9999999999765   345777777664

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0

Probab=99.77  E-value=3.6e-18  Score=148.38  Aligned_cols=224  Identities=14%  Similarity=0.046  Sum_probs=147.4

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCc-------------hhhcc----CCCCCCccCCCeeecCCcch
Q 018503           48 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRS-------------KAELI----FPGKKTRFFPGVMIAEEPQW  110 (355)
Q Consensus        48 ~~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~-------------~~~~~----~~~~~~~~~~~~d~~~~~~~  110 (355)
                      ..+++++||||+|.||++++++|+++|++|++++|+..             .....    ...........+|+.|.+++
T Consensus         9 l~~k~~lVTGas~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v   88 (277)
T 3tsc_A            9 LEGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVAAVVDTRDFDRL   88 (277)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHH
T ss_pred             cCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHH
Confidence            34578999999999999999999999999999998422             11111    00001111334688888887


Q ss_pred             hhhcC-------CCcEEEECCCCCCCC---CCChhhHHHHHHHhhhhHHHHHHHHHcC--CCC-CCcEEEEeeeeeeeeC
Q 018503          111 RDCIQ-------GSTAVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PEG-VRPSVLVSATALGYYG  177 (355)
Q Consensus       111 ~~~~~-------~~d~vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~-~~~~v~~Ss~~~~~yg  177 (355)
                      .++++       .+|++||+||.....   ..+.+.+...+++|+.++..+++++...  ..+ ..++|++||...  +.
T Consensus        89 ~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~--~~  166 (277)
T 3tsc_A           89 RKVVDDGVAALGRLDIIVANAGVAAPQAWDDITPEDFRDVMDINVTGTWNTVMAGAPRIIEGGRGGSIILISSAAG--MK  166 (277)
T ss_dssp             HHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGG--TS
T ss_pred             HHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCEEEEEccHhh--CC
Confidence            76664       689999999975432   3466778899999999999998875431  012 468999999876  32


Q ss_pred             CCCCccccCCCCCCChh-HHHHHHHHHHHHhccC---CCCeEEEEEecEEEeCCCCcccchHHHHHHH-hCC----CCCC
Q 018503          178 TSETEVFDESSPSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMF-AGG----PLGS  248 (355)
Q Consensus       178 ~~~~~~~~e~~~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~-~~~----~~~~  248 (355)
                      .         .+....| .+|...+.+.+.+..+   .|+++..++||.+..+..... ......... ...    .+..
T Consensus       167 ~---------~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~-~~~~~~~~~~~~~~~~~~~~~  236 (277)
T 3tsc_A          167 M---------QPFMIHYTASKHAVTGLARAFAAELGKHSIRVNSVHPGPVNTPMGSGD-MVTAVGQAMETNPQLSHVLTP  236 (277)
T ss_dssp             C---------CSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSGGGSHH-HHHHHHHHHHTCGGGTTTTCC
T ss_pred             C---------CCCchhhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeCCCcCCcccch-hhhhhhhcccccHHHHHHhhh
Confidence            1         1234567 7787766666554443   489999999999987643211 000001111 111    1111


Q ss_pred             CCcceecccHHHHHHHHHHHHhCCC---CCCceEecCCC
Q 018503          249 GQQWFSWIHLDDIVNLIYEALSNPS---YRGVINGTAPN  284 (355)
Q Consensus       249 ~~~~~~~i~v~Dva~~~~~~~~~~~---~~~~~~i~~~~  284 (355)
                      . ....+.+.+|+|++++.++..+.   .+..+++.+|.
T Consensus       237 ~-~p~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~  274 (277)
T 3tsc_A          237 F-LPDWVAEPEDIADTVCWLASDESRKVTAAQIPVDQGS  274 (277)
T ss_dssp             S-SSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             c-cCCCCCCHHHHHHHHHHHhCccccCCcCCEEeeCCCc
Confidence            1 11248899999999999997643   35578887764

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}

Probab=99.77  E-value=1.7e-18  Score=149.43  Aligned_cols=216  Identities=15%  Similarity=0.066  Sum_probs=142.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCc-hhhccC----CCCCCccCCCeeecCCcchhhhcC-------C
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRS-KAELIF----PGKKTRFFPGVMIAEEPQWRDCIQ-------G  116 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~-~~~~~~----~~~~~~~~~~~d~~~~~~~~~~~~-------~  116 (355)
                      ++++++||||+|+||++++++|+++|++|++.++... ......    ..........+|+.|.+++.++++       +
T Consensus        26 ~~k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~  105 (267)
T 3u5t_A           26 TNKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGGKALTAQADVSDPAAVRRLFATAEEAFGG  105 (267)
T ss_dssp             -CCEEEEESCSSHHHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            3468999999999999999999999999998855443 222111    011111134578999888877664       7


Q ss_pred             CcEEEECCCCCCC---CCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCCh
Q 018503          117 STAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGND  193 (355)
Q Consensus       117 ~d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~~  193 (355)
                      +|++||+||....   .....+.+...+++|+.++.++++++...-....++|++||...  +..         .+....
T Consensus       106 iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~~--~~~---------~~~~~~  174 (267)
T 3u5t_A          106 VDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVGGRIINMSTSQV--GLL---------HPSYGI  174 (267)
T ss_dssp             EEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCTHH--HHC---------CTTCHH
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeEEEEeChhh--ccC---------CCCchH
Confidence            8999999997532   23455667889999999999999887552012358999998765  221         123456


Q ss_pred             h-HHHHHHHHHHHHhccC---CCCeEEEEEecEEEeCCCCc--ccchHHHHHHHhCCCCCCCCcceecccHHHHHHHHHH
Q 018503          194 Y-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGA--LAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYE  267 (355)
Q Consensus       194 y-~~k~~~~~~~~~~~~~---~~~~~~i~Rp~~i~G~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~  267 (355)
                      | .+|...+.+.+.+..+   .|+++..++||.+..+....  ......  ......+      ...+...+|+|++++.
T Consensus       175 Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~--~~~~~~p------~~r~~~pedvA~~v~~  246 (267)
T 3u5t_A          175 YAAAKAGVEAMTHVLSKELRGRDITVNAVAPGPTATDLFLEGKSDEVRD--RFAKLAP------LERLGTPQDIAGAVAF  246 (267)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTSCCEEEEEEECCBC-----------CHH--HHHTSST------TCSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhhhCCEEEEEEECCCcCccccccCCHHHHH--HHHhcCC------CCCCcCHHHHHHHHHH
Confidence            8 7887777766655544   48999999999997764211  001111  1111122      2347889999999999


Q ss_pred             HHhCCC---CCCceEecCC
Q 018503          268 ALSNPS---YRGVINGTAP  283 (355)
Q Consensus       268 ~~~~~~---~~~~~~i~~~  283 (355)
                      ++....   .+..+++.+|
T Consensus       247 L~s~~~~~itG~~i~vdGG  265 (267)
T 3u5t_A          247 LAGPDGAWVNGQVLRANGG  265 (267)
T ss_dssp             HHSTTTTTCCSEEEEESSS
T ss_pred             HhCccccCccCCEEEeCCC
Confidence            998654   3447777665

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}

Probab=99.77  E-value=3.1e-18  Score=146.13  Aligned_cols=209  Identities=17%  Similarity=0.108  Sum_probs=126.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCc---chhhh---cCCCcEEEE
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEP---QWRDC---IQGSTAVVN  122 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~---~~~~~---~~~~d~vi~  122 (355)
                      ++++++||||+|+||++++++|++ |+.|++++|+.+.......... .....+|+.+.+   .+.+.   +.++|++||
T Consensus         4 ~~k~vlITGas~gIG~~~a~~l~~-g~~v~~~~r~~~~~~~~~~~~~-~~~~~~D~~~~~~~~~~~~~~~~~~~id~lv~   81 (245)
T 3e9n_A            4 KKKIAVVTGATGGMGIEIVKDLSR-DHIVYALGRNPEHLAALAEIEG-VEPIESDIVKEVLEEGGVDKLKNLDHVDTLVH   81 (245)
T ss_dssp             --CEEEEESTTSHHHHHHHHHHTT-TSEEEEEESCHHHHHHHHTSTT-EEEEECCHHHHHHTSSSCGGGTTCSCCSEEEE
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHhhcC-CcceecccchHHHHHHHHHHHHhcCCCCEEEE
Confidence            347899999999999999999988 9999999998776554332111 012334655542   22222   237899999


Q ss_pred             CCCCCCCC---CCChhhHHHHHHHhhhhHHHHHHHHHcC-CCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCChh-HHH
Q 018503          123 LAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES-PEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-LAE  197 (355)
Q Consensus       123 ~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~~y-~~k  197 (355)
                      +||.....   ....+.+...+++|+.++..+++++... .....++|++||...  +..         .+....| .+|
T Consensus        82 ~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~isS~~~--~~~---------~~~~~~Y~asK  150 (245)
T 3e9n_A           82 AAAVARDTTIEAGSVAEWHAHLDLNVIVPAELSRQLLPALRAASGCVIYINSGAG--NGP---------HPGNTIYAASK  150 (245)
T ss_dssp             CC----------CHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEC---------------------CHHHHHHH
T ss_pred             CCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeEEEEcCccc--ccC---------CCCchHHHHHH
Confidence            99975332   2234556788999999988877766321 012268999999876  432         1234567 778


Q ss_pred             HHHHHHHHHhccC---CCCeEEEEEecEEEeCCCCcccchHHHHHHHhCCCCCCCCcceecccHHHHHHHHHHHHhCCCC
Q 018503          198 VCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSY  274 (355)
Q Consensus       198 ~~~~~~~~~~~~~---~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~  274 (355)
                      ...+.+...+..+   .|+++..++||.+.++.....   ...    .+    .......+++.+|+|++++.++..+..
T Consensus       151 ~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~---~~~----~~----~~~~~~~~~~p~dvA~~i~~l~~~~~~  219 (245)
T 3e9n_A          151 HALRGLADAFRKEEANNGIRVSTVSPGPTNTPMLQGL---MDS----QG----TNFRPEIYIEPKEIANAIRFVIDAGET  219 (245)
T ss_dssp             HHHHHHHHHHHHHHGGGTCEEEEEEECCC---------------------------CCGGGSCHHHHHHHHHHHHTSCTT
T ss_pred             HHHHHHHHHHHHHhhhcCeEEEEEecCCccCchhhhh---hhh----hh----cccccccCCCHHHHHHHHHHHHcCCCc
Confidence            7777666555443   589999999999988743211   100    00    011123478999999999999998876


Q ss_pred             CCceEec
Q 018503          275 RGVINGT  281 (355)
Q Consensus       275 ~~~~~i~  281 (355)
                      +.+|++.
T Consensus       220 ~~~~~i~  226 (245)
T 3e9n_A          220 TQITNVD  226 (245)
T ss_dssp             EEEEEEE
T ss_pred             cceeeeE
Confidence            6677765

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*

Probab=99.77  E-value=5.3e-18  Score=144.79  Aligned_cols=214  Identities=15%  Similarity=0.112  Sum_probs=140.0

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCC-CCCccCCCeeecCCcchhhhcC-------CCcEEEE
Q 018503           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-KKTRFFPGVMIAEEPQWRDCIQ-------GSTAVVN  122 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~-------~~d~vi~  122 (355)
                      |+++||||+|+||+++++.|+++|++|++++|+.+........ ........+|+.|++++.++++       ++|++||
T Consensus         1 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lvn   80 (248)
T 3asu_A            1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWCNIDILVN   80 (248)
T ss_dssp             CEEEETTTTSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHTSCTTTCCCCEEEE
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCceEEEEcCCCCHHHHHHHHHHHHHhCCCCCEEEE
Confidence            5799999999999999999999999999999987654332110 0001134578999888877764       6899999


Q ss_pred             CCCCCC-C---CCCChhhHHHHHHHhhhhHHHHHHHHHcC--CCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCChh-H
Q 018503          123 LAGTPI-G---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-L  195 (355)
Q Consensus       123 ~a~~~~-~---~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~~y-~  195 (355)
                      +||... .   ...+.+.+...+++|+.++..+++++...  ..+.+++|++||...  +..         .+....| .
T Consensus        81 nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~--~~~---------~~~~~~Y~a  149 (248)
T 3asu_A           81 NAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAG--SWP---------YAGGNVYGA  149 (248)
T ss_dssp             CCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGG--TSC---------CTTCHHHHH
T ss_pred             CCCcCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEccchh--ccC---------CCCCchHHH
Confidence            999742 1   23456778889999999998888877521  035679999999865  321         1234567 7


Q ss_pred             HHHHHHHHHHHhcc---CCCCeEEEEEecEEEe-CCCCcccchHHHHHHHhCCCCCCCCcceecccHHHHHHHHHHHHhC
Q 018503          196 AEVCREWEGTALKV---NKDVRLALIRIGIVLG-KDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSN  271 (355)
Q Consensus       196 ~k~~~~~~~~~~~~---~~~~~~~i~Rp~~i~G-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~  271 (355)
                      +|...+.+.+.+..   ..|++++.++||.+.| +.....  +........ ...    ....++..+|+|++++.++..
T Consensus       150 sKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~gT~~~~~~--~~~~~~~~~-~~~----~~~~~~~p~dvA~~v~~l~s~  222 (248)
T 3asu_A          150 TKAFVRQFSLNLRTDLHGTAVRVTDIEPGLVGGTEFSNVR--FKGDDGKAE-KTY----QNTVALTPEDVSEAVWWVSTL  222 (248)
T ss_dssp             HHHHHHHHHHHHHHHTTTSCCEEEEEEECSBCC-----------------------------CCBCHHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHHHHHhhhcCcEEEEEeccccccCcchhhc--ccCchHHHH-HHH----hccCCCCHHHHHHHHHHHhcC
Confidence            78777666655443   3489999999999984 431110  000000000 000    012347899999999999987


Q ss_pred             CC--CCCceEecC
Q 018503          272 PS--YRGVINGTA  282 (355)
Q Consensus       272 ~~--~~~~~~i~~  282 (355)
                      +.  .+..+.+..
T Consensus       223 ~~~~~g~~i~v~~  235 (248)
T 3asu_A          223 PAHVNINTLEMMP  235 (248)
T ss_dssp             CTTCCCCEEEECC
T ss_pred             CccceeeEEEEcc
Confidence            54  233455544

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2

Probab=99.77  E-value=1.3e-18  Score=149.88  Aligned_cols=218  Identities=14%  Similarity=0.040  Sum_probs=142.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccC----CCCCCccCCCeeecCCcchhhhcC-------CC
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIF----PGKKTRFFPGVMIAEEPQWRDCIQ-------GS  117 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~~~~~~~~~~~d~~~~~~~~~~~~-------~~  117 (355)
                      ++++++||||+|+||++++++|+++|++|++++|+.+......    ..........+|+.|++++.++++       ++
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   85 (262)
T 1zem_A            6 NGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFGKI   85 (262)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence            4578999999999999999999999999999999876543221    111111133468888887766554       78


Q ss_pred             cEEEECCCCC-CC---CCCChhhHHHHHHHhhhhHHHHHHHHHcC--CCCCCcEEEEeeeeeeeeCCCCCccccCCCCCC
Q 018503          118 TAVVNLAGTP-IG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSG  191 (355)
Q Consensus       118 d~vi~~a~~~-~~---~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~  191 (355)
                      |++||+||.. ..   .....+.+...+++|+.++.++++++...  ..+.+++|++||...  +..         .+..
T Consensus        86 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~--~~~---------~~~~  154 (262)
T 1zem_A           86 DFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAG--VKG---------PPNM  154 (262)
T ss_dssp             CEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHH--HSC---------CTTB
T ss_pred             CEEEECCCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhh--ccC---------CCCC
Confidence            9999999964 21   23456777889999999999988876541  124578999999766  321         1223


Q ss_pred             Chh-HHHHHHHHHHHHhcc---CCCCeEEEEEecEEEeCCCCcc-------------cchHH-HHH-HHhCCCCCCCCcc
Q 018503          192 NDY-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGAL-------------AKMIP-LFM-MFAGGPLGSGQQW  252 (355)
Q Consensus       192 ~~y-~~k~~~~~~~~~~~~---~~~~~~~i~Rp~~i~G~~~~~~-------------~~~~~-~~~-~~~~~~~~~~~~~  252 (355)
                      ..| .+|...+.+.+.+..   ..|++++.++||.+..+.....             ..... ... .....++      
T Consensus       155 ~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~------  228 (262)
T 1zem_A          155 AAYGTSKGAIIALTETAALDLAPYNIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSVPM------  228 (262)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSHHHHHHHHHHHHHTCTTSCSSHHHHHHHHHHTSTT------
T ss_pred             chHHHHHHHHHHHHHHHHHHHHhhCeEEEEEecCCcCcchhhhhccchhhhccccccccCHHHHHHHHHhcCCC------
Confidence            467 777655555444332   3589999999998866531110             00000 011 1111222      


Q ss_pred             eecccHHHHHHHHHHHHhCCC---CCCceEecCC
Q 018503          253 FSWIHLDDIVNLIYEALSNPS---YRGVINGTAP  283 (355)
Q Consensus       253 ~~~i~v~Dva~~~~~~~~~~~---~~~~~~i~~~  283 (355)
                      ..+...+|+|++++.++....   .+..+.+.+|
T Consensus       229 ~r~~~p~dvA~~v~~l~s~~~~~itG~~i~vdGG  262 (262)
T 1zem_A          229 RRYGDINEIPGVVAFLLGDDSSFMTGVNLPIAGG  262 (262)
T ss_dssp             SSCBCGGGSHHHHHHHHSGGGTTCCSCEEEESCC
T ss_pred             CCCcCHHHHHHHHHHHcCchhcCcCCcEEecCCC
Confidence            136788999999999997543   3336666543

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}

Probab=99.76  E-value=1.3e-18  Score=154.12  Aligned_cols=214  Identities=12%  Similarity=0.020  Sum_probs=135.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCC----CC--CccCCCeeecCCcchhhhcC-------
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG----KK--TRFFPGVMIAEEPQWRDCIQ-------  115 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~----~~--~~~~~~~d~~~~~~~~~~~~-------  115 (355)
                      .+++||||||+|+||++++++|+++|++|++++|+.++.......    ..  ......+|+.|.+++.++++       
T Consensus         7 ~~k~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g   86 (319)
T 3ioy_A            7 AGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVEARFG   86 (319)
T ss_dssp             TTCEEEEETTTSTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred             CCCEEEEcCCchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHHHhCC
Confidence            346899999999999999999999999999999997654332110    00  01134578889888877664       


Q ss_pred             CCcEEEECCCCCCC---CCCChhhHHHHHHHhhhhHHHHHHHHHcC--C------CCCCcEEEEeeeeeeeeCCCCCccc
Q 018503          116 GSTAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--P------EGVRPSVLVSATALGYYGTSETEVF  184 (355)
Q Consensus       116 ~~d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~------~~~~~~v~~Ss~~~~~yg~~~~~~~  184 (355)
                      ++|+|||+||....   .....+.+...+++|+.++.++++++...  .      .+.+++|++||...  +..      
T Consensus        87 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iV~isS~a~--~~~------  158 (319)
T 3ioy_A           87 PVSILCNNAGVNLFQPIEESSYDDWDWLLGVNLHGVVNGVTTFVPRMVERVKAGEQKGGHVVNTASMAA--FLA------  158 (319)
T ss_dssp             CEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTSCCCCEEEEECCGGG--TCC------
T ss_pred             CCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhhccCCCCcEEEEeccccc--ccC------
Confidence            67999999997432   23356777889999999999998877542  0      13567999999876  332      


Q ss_pred             cCCCCCCChh-HHHHHHHHHHHHhcc---CCCCeEEEEEecEEEeCCCCcccchHHHH----HHHhCCCCCC-CCcceec
Q 018503          185 DESSPSGNDY-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALAKMIPLF----MMFAGGPLGS-GQQWFSW  255 (355)
Q Consensus       185 ~e~~~~~~~y-~~k~~~~~~~~~~~~---~~~~~~~i~Rp~~i~G~~~~~~~~~~~~~----~~~~~~~~~~-~~~~~~~  255 (355)
                         .+....| .+|...+.+.+.+..   ..|+++++++||.|.++...........+    .......... .......
T Consensus       159 ---~~~~~~Y~aSKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (319)
T 3ioy_A          159 ---AGSPGIYNTTKFAVRGLSESLHYSLLKYEIGVSVLCPGLVKSYIYASDDIRPDALKGEVKPVDKTAVERLAGVHEFG  235 (319)
T ss_dssp             ---CSSSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCCBC-----------------------------CCGGGSS
T ss_pred             ---CCCCHHHHHHHHHHHHHHHHHHHHhhhcCCEEEEEEcCeEccCcccccccCchhhcccccchhHHHHHHHHHhhhcC
Confidence               1223467 778754444433322   24899999999999876432111000000    0000000100 1111123


Q ss_pred             ccHHHHHHHHHHHHhCCC
Q 018503          256 IHLDDIVNLIYEALSNPS  273 (355)
Q Consensus       256 i~v~Dva~~~~~~~~~~~  273 (355)
                      ++.+|+|+.++.+++.+.
T Consensus       236 ~~pe~vA~~~~~al~~~~  253 (319)
T 3ioy_A          236 MEPDVIGARVIEAMKANR  253 (319)
T ss_dssp             BCHHHHHHHHHHHHHTTC
T ss_pred             CCHHHHHHHHHHHHHcCC
Confidence            799999999999999764

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}

Probab=99.76  E-value=7e-18  Score=144.79  Aligned_cols=220  Identities=15%  Similarity=0.084  Sum_probs=146.2

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEe-cCCchhhccC----CCCCCccCCCeeecCCcchhhhcC-------
Q 018503           48 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLT-RSRSKAELIF----PGKKTRFFPGVMIAEEPQWRDCIQ-------  115 (355)
Q Consensus        48 ~~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~-r~~~~~~~~~----~~~~~~~~~~~d~~~~~~~~~~~~-------  115 (355)
                      ..+++++||||+|+||++++++|+++|++|++++ |+.+......    ..........+|+.|.+++.++++       
T Consensus         5 l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   84 (255)
T 3icc_A            5 LKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQ   84 (255)
T ss_dssp             TTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCSHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhcCCceEEEecCcCCHHHHHHHHHHHHHHhc
Confidence            4457999999999999999999999999999864 4444332211    111101123467778777665553       


Q ss_pred             ------CCcEEEECCCCCCCC---CCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCCCCccccC
Q 018503          116 ------GSTAVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDE  186 (355)
Q Consensus       116 ------~~d~vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e  186 (355)
                            .+|++||+||.....   ....+.....+++|+.++..+++++...-....++|++||...  +..        
T Consensus        85 ~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~isS~~~--~~~--------  154 (255)
T 3icc_A           85 NRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAAT--RIS--------  154 (255)
T ss_dssp             HHHSSSCEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGG--TSC--------
T ss_pred             ccccCCcccEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHhhCCCCEEEEeCChhh--ccC--------
Confidence                  289999999975332   3355667888999999999999998762113458999999876  321        


Q ss_pred             CCCCCChh-HHHHHHHHHHHHhccC---CCCeEEEEEecEEEeCCCCcccchHHHH-HHHhCCCCCCCCcceecccHHHH
Q 018503          187 SSPSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLF-MMFAGGPLGSGQQWFSWIHLDDI  261 (355)
Q Consensus       187 ~~~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~i~Rp~~i~G~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~v~Dv  261 (355)
                       .+....| .+|...+.+.+.+..+   .++++..++||.+..+............ ......+      ...+...+|+
T Consensus       155 -~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~dv  227 (255)
T 3icc_A          155 -LPDFIAYSMTKGAINTMTFTLAKQLGARGITVNAILPGFVKTDMNAELLSDPMMKQYATTISA------FNRLGEVEDI  227 (255)
T ss_dssp             -CTTBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCSSSTTTTTSHHHHHHHHHTST------TSSCBCHHHH
T ss_pred             -CCCcchhHHhHHHHHHHHHHHHHHHHhcCeEEEEEEEeeecccchhhhcccHHHHHhhhccCC------cCCCCCHHHH
Confidence             1223567 7787666665544433   4899999999999887543221111111 1111122      2347889999


Q ss_pred             HHHHHHHHhCCC---CCCceEecCCC
Q 018503          262 VNLIYEALSNPS---YRGVINGTAPN  284 (355)
Q Consensus       262 a~~~~~~~~~~~---~~~~~~i~~~~  284 (355)
                      |++++.++....   .+..+++.+|.
T Consensus       228 a~~~~~l~s~~~~~~tG~~i~vdgG~  253 (255)
T 3icc_A          228 ADTAAFLASPDSRWVTGQLIDVSGGS  253 (255)
T ss_dssp             HHHHHHHHSGGGTTCCSCEEEESSST
T ss_pred             HHHHHHHhCcccCCccCCEEEecCCe
Confidence            999999987543   45588888775

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}

Probab=99.76  E-value=2.9e-18  Score=147.05  Aligned_cols=215  Identities=15%  Similarity=0.081  Sum_probs=145.1

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCC--CeEEEEecCCchhhccCCC-CCCccCCCeeecCCcchhhhcC-------CCcE
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADN--HQVRVLTRSRSKAELIFPG-KKTRFFPGVMIAEEPQWRDCIQ-------GSTA  119 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~-------~~d~  119 (355)
                      +++++||||+|+||++++++|++.|  +.|++++|+.+........ ........+|+.|.+++.++++       ++|+
T Consensus         2 gk~~lVTGas~GIG~aia~~l~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~   81 (254)
T 3kzv_A            2 GKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKYGDRFFYVVGDITEDSVLKQLVNAAVKGHGKIDS   81 (254)
T ss_dssp             CCEEEECSTTSHHHHHHHHHHHHHCSSCEEEEEESCHHHHHHHHHHHGGGEEEEESCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCCeEEEEecCCHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHhcCCccE
Confidence            4789999999999999999999974  8999999987654432211 0001134578899888877664       7899


Q ss_pred             EEECCCCCCC----CCCChhhHHHHHHHhhhhHHHHHHHH----HcCCCCCCcEEEEeeeeeeeeCCCCCccccCCCCCC
Q 018503          120 VVNLAGTPIG----TRWSSEIKKEIKESRIRVTSKVVDLI----NESPEGVRPSVLVSATALGYYGTSETEVFDESSPSG  191 (355)
Q Consensus       120 vi~~a~~~~~----~~~~~~~~~~~~~~n~~~~~~l~~a~----~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~  191 (355)
                      +||+||....    ...+.+.+...+++|+.++..+++++    ++  .+ .++|++||...  +..         .+..
T Consensus        82 lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~--~~-g~iv~isS~~~--~~~---------~~~~  147 (254)
T 3kzv_A           82 LVANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSLVGIALPELKK--TN-GNVVFVSSDAC--NMY---------FSSW  147 (254)
T ss_dssp             EEEECCCCCCCTTTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH--HT-CEEEEECCSCC--CCS---------SCCS
T ss_pred             EEECCcccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHh--cC-CeEEEEcCchh--ccC---------CCCc
Confidence            9999997422    24456778899999999999998887    33  23 78999999876  321         2234


Q ss_pred             Chh-HHHHHHHHHHHHhccC-CCCeEEEEEecEEEeCCCCcccc------h-HHHH-HHHhCCCCCCCCcceecccHHHH
Q 018503          192 NDY-LAEVCREWEGTALKVN-KDVRLALIRIGIVLGKDGGALAK------M-IPLF-MMFAGGPLGSGQQWFSWIHLDDI  261 (355)
Q Consensus       192 ~~y-~~k~~~~~~~~~~~~~-~~~~~~i~Rp~~i~G~~~~~~~~------~-~~~~-~~~~~~~~~~~~~~~~~i~v~Dv  261 (355)
                      ..| .+|...+.+.+.+..+ .++++..++||.+..+.......      . .... ......+      ...+.+.+|+
T Consensus       148 ~~Y~asK~a~~~~~~~la~e~~~i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~r~~~p~dv  221 (254)
T 3kzv_A          148 GAYGSSKAALNHFAMTLANEERQVKAIAVAPGIVDTDMQVNIRENVGPSSMSAEQLKMFRGLKE------NNQLLDSSVP  221 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHCTTSEEEEEECSSCCCCCSCCCCCCCCTTTSCHHHHHHHHHHHT------TC----CHHH
T ss_pred             chHHHHHHHHHHHHHHHHhhccCcEEEEEeCCcccchhHHHhhcccCccccCHHHHHHHHHHHh------cCCcCCcccH
Confidence            568 7887777666655544 48999999999998875322100      0 0111 1111111      1247889999


Q ss_pred             HHHHHHHHhCCC----CCCceEecCCC
Q 018503          262 VNLIYEALSNPS----YRGVINGTAPN  284 (355)
Q Consensus       262 a~~~~~~~~~~~----~~~~~~i~~~~  284 (355)
                      |++++.++....    .+..+++.+++
T Consensus       222 a~~v~~L~s~~~~~~itG~~i~vdg~~  248 (254)
T 3kzv_A          222 ATVYAKLALHGIPDGVNGQYLSYNDPA  248 (254)
T ss_dssp             HHHHHHHHHHCCCGGGTTCEEETTCGG
T ss_pred             HHHHHHHHhhcccCCCCccEEEecCcc
Confidence            999999998662    34477776654

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...

Probab=99.76  E-value=9.7e-18  Score=146.51  Aligned_cols=216  Identities=13%  Similarity=0.037  Sum_probs=143.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCC-chhhccCC-----CCCCccCCCeeecC----CcchhhhcC---
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSR-SKAELIFP-----GKKTRFFPGVMIAE----EPQWRDCIQ---  115 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~-~~~~~~~~-----~~~~~~~~~~d~~~----~~~~~~~~~---  115 (355)
                      +.++++||||+|+||++++++|+++|++|++++|+. +.......     .........+|+.|    .+++.++++   
T Consensus        22 ~~k~~lVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~~  101 (288)
T 2x9g_A           22 EAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVCQADLTNSNVLPASCEEIINSCF  101 (288)
T ss_dssp             CCCEEEETTCSSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSCSTTHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhhcCCceEEEEeecCCccCCHHHHHHHHHHHH
Confidence            357899999999999999999999999999999987 44322110     00111134578888    777766653   


Q ss_pred             ----CCcEEEECCCCCCCCC-------------CChhhHHHHHHHhhhhHHHHHHHHHcC--CCC------CCcEEEEee
Q 018503          116 ----GSTAVVNLAGTPIGTR-------------WSSEIKKEIKESRIRVTSKVVDLINES--PEG------VRPSVLVSA  170 (355)
Q Consensus       116 ----~~d~vi~~a~~~~~~~-------------~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~------~~~~v~~Ss  170 (355)
                          ++|++||+||......             ...+.+...+++|+.++..+++++...  ..+      ..++|++||
T Consensus       102 ~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iv~isS  181 (288)
T 2x9g_A          102 RAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLCD  181 (288)
T ss_dssp             HHHSCCCEEEECCCCCCCCCSCCC--------CCHHHHHHHHHHHHTHHHHHHHHHHHHHC--------CCCEEEEEECC
T ss_pred             HhcCCCCEEEECCCCCCCCccccccchhcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCCCCCCeEEEEEec
Confidence                7899999999753221             234556788999999999998877542  122      468999999


Q ss_pred             eeeeeeCCCCCccccCCCCCCChh-HHHHHHHHHHHHhccC---CCCeEEEEEecEEEeCCCCcccchHHHHHHHhCCCC
Q 018503          171 TALGYYGTSETEVFDESSPSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPL  246 (355)
Q Consensus       171 ~~~~~yg~~~~~~~~e~~~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~~~~~~  246 (355)
                      ...  +..         .+....| .+|...+.+.+.+..+   .|++++.++||.++++. .......  .......++
T Consensus       182 ~~~--~~~---------~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~-~~~~~~~--~~~~~~~p~  247 (288)
T 2x9g_A          182 AMV--DQP---------CMAFSLYNMGKHALVGLTQSAALELAPYGIRVNGVAPGVSLLPV-AMGEEEK--DKWRRKVPL  247 (288)
T ss_dssp             TTT--TSC---------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSCSCCT-TSCHHHH--HHHHHTCTT
T ss_pred             ccc--cCC---------CCCCchHHHHHHHHHHHHHHHHHHhhccCeEEEEEEeccccCcc-ccChHHH--HHHHhhCCC
Confidence            765  321         2234567 7786665555444332   48999999999999886 2111111  112222222


Q ss_pred             CCCCcceec-ccHHHHHHHHHHHHhCCC---CCCceEecCCC
Q 018503          247 GSGQQWFSW-IHLDDIVNLIYEALSNPS---YRGVINGTAPN  284 (355)
Q Consensus       247 ~~~~~~~~~-i~v~Dva~~~~~~~~~~~---~~~~~~i~~~~  284 (355)
                      +      .+ ...+|+|++++.++....   .+..+++.+|.
T Consensus       248 ~------r~~~~pedvA~~v~~l~s~~~~~itG~~i~vdGG~  283 (288)
T 2x9g_A          248 G------RREASAEQIADAVIFLVSGSAQYITGSIIKVDGGL  283 (288)
T ss_dssp             T------SSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             C------CCCCCHHHHHHHHHHHhCccccCccCCEEEECcch
Confidence            1      24 789999999999997532   34477777764

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}

Probab=99.76  E-value=3e-18  Score=146.50  Aligned_cols=199  Identities=19%  Similarity=0.139  Sum_probs=136.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCC-------CCCCccCCCeeecCCcchhhhcC------
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP-------GKKTRFFPGVMIAEEPQWRDCIQ------  115 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-------~~~~~~~~~~d~~~~~~~~~~~~------  115 (355)
                      +++++|||||+|+||++++++|+++|++|++++|+.+.......       .........+|+.|.+++.++++      
T Consensus         6 ~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   85 (250)
T 3nyw_A            6 QKGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKDIHQKY   85 (250)
T ss_dssp             CCCEEEEESTTSHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHHHHHhc
Confidence            45789999999999999999999999999999998765433211       00111134578889888776664      


Q ss_pred             -CCcEEEECCCCCCCC--CCChhhHHHHHHHhhhhHHHHHHHHHcC--CCCCCcEEEEeeeeeeeeCCCCCccccCCCCC
Q 018503          116 -GSTAVVNLAGTPIGT--RWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPS  190 (355)
Q Consensus       116 -~~d~vi~~a~~~~~~--~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~  190 (355)
                       ++|++||+||.....  ....+.+...+++|+.++..+++++...  ..+..++|++||.... ++          .++
T Consensus        86 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~-~~----------~~~  154 (250)
T 3nyw_A           86 GAVDILVNAAAMFMDGSLSEPVDNFRKIMEINVIAQYGILKTVTEIMKVQKNGYIFNVASRAAK-YG----------FAD  154 (250)
T ss_dssp             CCEEEEEECCCCCCCCCCSCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECC------------------CC
T ss_pred             CCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEEccHHhc-CC----------CCC
Confidence             689999999975332  2334666789999999999988877321  0356789999997762 21          122


Q ss_pred             CChh-HHHHHHHHHHHHhccC---CCCeEEEEEecEEEeCCCCcccchHHHHHHHhCCCCCCCCcceecccHHHHHHHHH
Q 018503          191 GNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIY  266 (355)
Q Consensus       191 ~~~y-~~k~~~~~~~~~~~~~---~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~  266 (355)
                      ...| .+|...+.+.+.+..+   .|+++..++||.+..+.       ..   . ...    ......++..+|+|++++
T Consensus       155 ~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~-------~~---~-~~~----~~~~~~~~~p~dva~~v~  219 (250)
T 3nyw_A          155 GGIYGSTKFALLGLAESLYRELAPLGIRVTTLCPGWVNTDM-------AK---K-AGT----PFKDEEMIQPDDLLNTIR  219 (250)
T ss_dssp             TTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSHH-------HH---H-TTC----CSCGGGSBCHHHHHHHHH
T ss_pred             CcchHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCch-------hh---h-cCC----CcccccCCCHHHHHHHHH
Confidence            4578 7787666655544433   48999999999886542       11   0 011    112234789999999999


Q ss_pred             HHHhCCC
Q 018503          267 EALSNPS  273 (355)
Q Consensus       267 ~~~~~~~  273 (355)
                      .++..+.
T Consensus       220 ~l~s~~~  226 (250)
T 3nyw_A          220 CLLNLSE  226 (250)
T ss_dssp             HHHTSCT
T ss_pred             HHHcCCC
Confidence            9999765

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}

Probab=99.75  E-value=6.1e-18  Score=146.30  Aligned_cols=205  Identities=15%  Similarity=0.134  Sum_probs=135.1

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCC---CCCccCCCeeecCCcchhhhcC-------CCcEE
Q 018503           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG---KKTRFFPGVMIAEEPQWRDCIQ-------GSTAV  120 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~---~~~~~~~~~d~~~~~~~~~~~~-------~~d~v  120 (355)
                      ++++||||+|+||++++++|+++|++|++++|+.+........   ........+|+.|.+++.++++       .+|++
T Consensus        22 k~vlVTGas~gIG~aia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l  101 (272)
T 2nwq_A           22 STLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELSAKTRVLPLTLDVRDRAAMSAAVDNLPEEFATLRGL  101 (272)
T ss_dssp             CEEEESSTTTSSHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHTCCGGGSSCCEE
T ss_pred             cEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            6899999999999999999999999999999987654332110   0011134578899888877764       46999


Q ss_pred             EECCCCCCC----CCCChhhHHHHHHHhhhhHHHHHHHHHcC--CCCCC-cEEEEeeeeeeeeCCCCCccccCCCCCCCh
Q 018503          121 VNLAGTPIG----TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVR-PSVLVSATALGYYGTSETEVFDESSPSGND  193 (355)
Q Consensus       121 i~~a~~~~~----~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~~-~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~~  193 (355)
                      ||+||....    .....+.+...+++|+.++..+++++...  ..+.+ ++|++||...  +..         .+....
T Consensus       102 vnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~~IV~isS~~~--~~~---------~~~~~~  170 (272)
T 2nwq_A          102 INNAGLALGTDPAQSCDLDDWDTMVDTNIKGLLYSTRLLLPRLIAHGAGASIVNLGSVAG--KWP---------YPGSHV  170 (272)
T ss_dssp             EECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCTTCEEEEECCGGG--TSC---------CTTCHH
T ss_pred             EECCCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeCCchh--ccC---------CCCCch
Confidence            999997431    23456777889999999988777665321  03456 8999999765  321         123356


Q ss_pred             h-HHHHHHHHHHHHhccC---CCCeEEEEEecEEEeCCCCcccchHHHHHHHhCCCCCCCCcceecccHHHHHHHHHHHH
Q 018503          194 Y-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEAL  269 (355)
Q Consensus       194 y-~~k~~~~~~~~~~~~~---~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~  269 (355)
                      | .+|...+.+.+.+..+   .|++++.++||.+.++.....  +........ ....    ...++..+|+|++++.++
T Consensus       171 Y~asKaa~~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~--~~~~~~~~~-~~~~----~~~~~~pedvA~~v~~l~  243 (272)
T 2nwq_A          171 YGGTKAFVEQFSLNLRCDLQGTGVRVTNLEPGLCESEFSLVR--FGGDQARYD-KTYA----GAHPIQPEDIAETIFWIM  243 (272)
T ss_dssp             HHHHHHHHHHHHHHHHTTCTTSCCEEEEEEECSBC---------------------------CCCCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhCccCeEEEEEEcCCCcCcchhcc--cccchHHHH-Hhhc----cCCCCCHHHHHHHHHHHh
Confidence            7 7787777776665543   489999999999987642110  000000000 0000    112478999999999999


Q ss_pred             hCCC
Q 018503          270 SNPS  273 (355)
Q Consensus       270 ~~~~  273 (355)
                      ..+.
T Consensus       244 s~~~  247 (272)
T 2nwq_A          244 NQPA  247 (272)
T ss_dssp             TSCT
T ss_pred             CCCc
Confidence            8654

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*

Probab=99.75  E-value=2.6e-17  Score=143.91  Aligned_cols=217  Identities=12%  Similarity=0.065  Sum_probs=144.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEe-cCCchhhccCC-----CCCCccCCCeeecCCc--------------
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLT-RSRSKAELIFP-----GKKTRFFPGVMIAEEP--------------  108 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~-r~~~~~~~~~~-----~~~~~~~~~~d~~~~~--------------  108 (355)
                      ..++++||||+|+||+++++.|+++|++|++++ |+.+.......     .........+|+.|.+              
T Consensus         8 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   87 (291)
T 1e7w_A            8 TVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPVT   87 (291)
T ss_dssp             CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CCCBC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHhhhcCCeeEEEEeecCCcccccccccccccccc
Confidence            457899999999999999999999999999999 88654332110     0111113457888888              


Q ss_pred             ---chhhhcC-------CCcEEEECCCCCCCC---CCC--------------hhhHHHHHHHhhhhHHHHHHHHHcC--C
Q 018503          109 ---QWRDCIQ-------GSTAVVNLAGTPIGT---RWS--------------SEIKKEIKESRIRVTSKVVDLINES--P  159 (355)
Q Consensus       109 ---~~~~~~~-------~~d~vi~~a~~~~~~---~~~--------------~~~~~~~~~~n~~~~~~l~~a~~~~--~  159 (355)
                         ++.++++       .+|++|||||.....   ...              .+.+...+++|+.++..+++++...  .
T Consensus        88 ~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~  167 (291)
T 1e7w_A           88 LFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAG  167 (291)
T ss_dssp             HHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHHHHT
T ss_pred             hHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHhHHHHHHHHHHHHHHHh
Confidence               7776664       789999999975321   223              5566788999999999998877531  1


Q ss_pred             CC------CCcEEEEeeeeeeeeCCCCCccccCCCCCCChh-HHHHHHHHHHHHhcc---CCCCeEEEEEecEEEeCCCC
Q 018503          160 EG------VRPSVLVSATALGYYGTSETEVFDESSPSGNDY-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGG  229 (355)
Q Consensus       160 ~~------~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~~y-~~k~~~~~~~~~~~~---~~~~~~~i~Rp~~i~G~~~~  229 (355)
                      .+      .+++|++||...  +..         .+....| .+|...+.+...+..   ..|++++.++||.+..+. .
T Consensus       168 ~~~~~~~~~g~Iv~isS~~~--~~~---------~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~-~  235 (291)
T 1e7w_A          168 TPAKHRGTNYSIINMVDAMT--NQP---------LLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVD-D  235 (291)
T ss_dssp             SCGGGSCSCEEEEEECCTTT--TSC---------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCGG-G
T ss_pred             cCCCCCCCCcEEEEEechhh--cCC---------CCCCchhHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCccCCc-c
Confidence            33      578999999765  321         1234567 777766655544433   248999999999987664 2


Q ss_pred             cccchHHHH-HHHhCCCCCCCCcceecccHHHHHHHHHHHHhCCC---CCCceEecCCCc
Q 018503          230 ALAKMIPLF-MMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPS---YRGVINGTAPNP  285 (355)
Q Consensus       230 ~~~~~~~~~-~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~---~~~~~~i~~~~~  285 (355)
                       ..  -... ......+++.     .+...+|+|++++.++....   .+..+++.+|..
T Consensus       236 -~~--~~~~~~~~~~~p~~~-----r~~~pedvA~~v~~l~s~~~~~itG~~i~vdGG~~  287 (291)
T 1e7w_A          236 -MP--PAVWEGHRSKVPLYQ-----RDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYS  287 (291)
T ss_dssp             -SC--HHHHHHHHTTCTTTT-----SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             -CC--HHHHHHHHhhCCCCC-----CCCCHHHHHHHHHHHhCCcccCccCcEEEECCCcc
Confidence             11  1111 1112222210     36789999999999997533   344777777643

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A

Probab=99.75  E-value=7.7e-17  Score=139.27  Aligned_cols=220  Identities=13%  Similarity=-0.020  Sum_probs=148.4

Q ss_pred             CCCEEEEEcCC--chHHHHHHHHHHhCCCeEEEEecCCchh-hcc----CC-CCCCccCCCeeecCCcchhhhcC-----
Q 018503           49 SQMTVSVTGAT--GFIGRRLVQRLQADNHQVRVLTRSRSKA-ELI----FP-GKKTRFFPGVMIAEEPQWRDCIQ-----  115 (355)
Q Consensus        49 ~~~~IlVtGat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~~----~~-~~~~~~~~~~d~~~~~~~~~~~~-----  115 (355)
                      ..++|+||||+  |+||++++++|++.|++|++++|+.... ...    .. .........+|+.|.+++.++++     
T Consensus        19 ~~k~vlITGas~~~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   98 (267)
T 3gdg_A           19 KGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYGIKAKAYKCQVDSYESCEKLVKDVVAD   98 (267)
T ss_dssp             TTCEEEETTCCSSSSHHHHHHHHHHHTSCEEEECBSSSSSHHHHHHHHHHHHHCCCEECCBCCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEEeCCcchhHHHHHHHHHHhcCCceeEEecCCCCHHHHHHHHHHHHHH
Confidence            45789999999  8999999999999999999999886543 111    00 00111245679999888776664     


Q ss_pred             --CCcEEEECCCCCCC---CCCChhhHHHHHHHhhhhHHHHHHHHHcC--CCCCCcEEEEeeeeeeeeCCCCCccccCCC
Q 018503          116 --GSTAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESS  188 (355)
Q Consensus       116 --~~d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~  188 (355)
                        .+|++||+||....   ...+.+.+...+++|+.++.++++++...  ..+..++|++||...  +...       ..
T Consensus        99 ~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~--~~~~-------~~  169 (267)
T 3gdg_A           99 FGQIDAFIANAGATADSGILDGSVEAWNHVVQVDLNGTFHCAKAVGHHFKERGTGSLVITASMSG--HIAN-------FP  169 (267)
T ss_dssp             TSCCSEEEECCCCCCCSCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGG--TSCC-------SS
T ss_pred             cCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhcchHHHHHHHHHHHHHHHcCCceEEEEccccc--cccC-------CC
Confidence              67999999997533   23356777889999999999998887221  035678999999765  2211       01


Q ss_pred             CCCChh-HHHHHHHHHHHHhccCC--CCeEEEEEecEEEeCCCCcccchHHHHHHHhCCCCCCCCcceecccHHHHHHHH
Q 018503          189 PSGNDY-LAEVCREWEGTALKVNK--DVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLI  265 (355)
Q Consensus       189 ~~~~~y-~~k~~~~~~~~~~~~~~--~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~  265 (355)
                      +....| .+|...+.+.+.+..+.  .+++..+.||.+..+......... ........+      ...+.+.+|+|+++
T Consensus       170 ~~~~~Y~~sK~a~~~~~~~la~e~~~~i~v~~v~PG~v~t~~~~~~~~~~-~~~~~~~~~------~~r~~~~~dva~~~  242 (267)
T 3gdg_A          170 QEQTSYNVAKAGCIHMARSLANEWRDFARVNSISPGYIDTGLSDFVPKET-QQLWHSMIP------MGRDGLAKELKGAY  242 (267)
T ss_dssp             SCCHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEEECCEECSCGGGSCHHH-HHHHHTTST------TSSCEETHHHHHHH
T ss_pred             CCCCcchHHHHHHHHHHHHHHHHhccCcEEEEEECCccccchhhhCCHHH-HHHHHhcCC------CCCCcCHHHHHhHh
Confidence            133567 78877776666555443  378999999999876432211110 011122222      23478899999999


Q ss_pred             HHHHhCCC---CCCceEecCCC
Q 018503          266 YEALSNPS---YRGVINGTAPN  284 (355)
Q Consensus       266 ~~~~~~~~---~~~~~~i~~~~  284 (355)
                      +.++....   .+..+++.+|.
T Consensus       243 ~~l~s~~~~~itG~~i~vdgG~  264 (267)
T 3gdg_A          243 VYFASDASTYTTGADLLIDGGY  264 (267)
T ss_dssp             HHHHSTTCTTCCSCEEEESTTG
T ss_pred             heeecCccccccCCEEEECCce
Confidence            99997643   35588888774

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}

Probab=99.75  E-value=3.1e-18  Score=147.48  Aligned_cols=221  Identities=8%  Similarity=-0.027  Sum_probs=142.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhcc-------CCCCCCccCCCeeecCCcchhhhcC------
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELI-------FPGKKTRFFPGVMIAEEPQWRDCIQ------  115 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-------~~~~~~~~~~~~d~~~~~~~~~~~~------  115 (355)
                      ..++++||||+|.||++++++|+++|++|++++|........       ...........+|+.|.+++.++++      
T Consensus        10 ~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~   89 (262)
T 3ksu_A           10 KNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDLSNEEEVAKLFDFAEKEF   89 (262)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTTTCEEEEEECCCCSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            457899999999999999999999999999998865432111       1111111134579999988877764      


Q ss_pred             -CCcEEEECCCCCCC---CCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCCCCccccCCCCCC
Q 018503          116 -GSTAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSG  191 (355)
Q Consensus       116 -~~d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~  191 (355)
                       ++|++||+||....   ...+.+.+...+++|+.++..+++++...-.+..++|++||...  +..         .+..
T Consensus        90 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~isS~~~--~~~---------~~~~  158 (262)
T 3ksu_A           90 GKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNPNGHIITIATSLL--AAY---------TGFY  158 (262)
T ss_dssp             CSEEEEEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEECCCHH--HHH---------HCCC
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCEEEEEechhh--ccC---------CCCC
Confidence             68999999997533   23456777889999999999999998762113468999999766  321         1123


Q ss_pred             Chh-HHHHHHHHHHHHhccC---CCCeEEEEEecEEEeCCCCcccchHHHHHHHhCCCCCCCCcceecccHHHHHHHHHH
Q 018503          192 NDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYE  267 (355)
Q Consensus       192 ~~y-~~k~~~~~~~~~~~~~---~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~  267 (355)
                      ..| .+|...+.+.+.+..+   .|+++..++||.+..+....... .....     ..........+...+|+|++++.
T Consensus       159 ~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~-~~~~~-----~~~~~~~~~r~~~pedvA~~v~~  232 (262)
T 3ksu_A          159 STYAGNKAPVEHYTRAASKELMKQQISVNAIAPGPMDTSFFYGQET-KESTA-----FHKSQAMGNQLTKIEDIAPIIKF  232 (262)
T ss_dssp             CC-----CHHHHHHHHHHHHTTTTTCEEEEEEECCCCTHHHHTCC------------------CCCCSCCGGGTHHHHHH
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCccccccCc-hHHHH-----HHHhcCcccCCCCHHHHHHHHHH
Confidence            456 6776666555544443   48999999999886542100000 00000     00111122347888999999999


Q ss_pred             HHhCCC--CCCceEecCCCcc
Q 018503          268 ALSNPS--YRGVINGTAPNPV  286 (355)
Q Consensus       268 ~~~~~~--~~~~~~i~~~~~~  286 (355)
                      ++....  .+..+++.+|...
T Consensus       233 L~s~~~~itG~~i~vdGg~~~  253 (262)
T 3ksu_A          233 LTTDGWWINGQTIFANGGYTT  253 (262)
T ss_dssp             HHTTTTTCCSCEEEESTTCCC
T ss_pred             HcCCCCCccCCEEEECCCccC
Confidence            998632  3457888777533

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0

Probab=99.75  E-value=4.2e-18  Score=145.48  Aligned_cols=199  Identities=13%  Similarity=0.067  Sum_probs=134.5

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCC----CC-CCccCCCeee--cCCcchhhhc------
Q 018503           48 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP----GK-KTRFFPGVMI--AEEPQWRDCI------  114 (355)
Q Consensus        48 ~~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~-~~~~~~~~d~--~~~~~~~~~~------  114 (355)
                      ..+++++||||+|+||++++++|+++|++|++++|+.........    .. .......+|+  .+.+++.+++      
T Consensus        12 l~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~d~~~~~~~~~~~~~~~~~   91 (247)
T 3i1j_A           12 LKGRVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLENATAQQYRELAARVEHE   91 (247)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTSCCCEEEECCTTTCCHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCCCceEEEeccccCCHHHHHHHHHHHHHh
Confidence            456799999999999999999999999999999998765433211    00 0000222344  6766666554      


Q ss_pred             -CCCcEEEECCCCCCC----CCCChhhHHHHHHHhhhhHHHHHHHHHcC--CCCCCcEEEEeeeeeeeeCCCCCccccCC
Q 018503          115 -QGSTAVVNLAGTPIG----TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDES  187 (355)
Q Consensus       115 -~~~d~vi~~a~~~~~----~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~  187 (355)
                       .++|++||+||....    .....+.+...+++|+.++..+++++...  ..+.+++|++||...  +..         
T Consensus        92 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~--~~~---------  160 (247)
T 3i1j_A           92 FGRLDGLLHNASIIGPRTPLEQLPDEDFMQVMHVNVNATFMLTRALLPLLKRSEDASIAFTSSSVG--RKG---------  160 (247)
T ss_dssp             HSCCSEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSEEEEEECCGGG--TSC---------
T ss_pred             CCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCeEEEEcchhh--cCC---------
Confidence             378999999997422    23456778899999999999999887321  145678999999765  221         


Q ss_pred             CCCCChh-HHHHHHHHHHHHhccC----CCCeEEEEEecEEEeCCCCcccchHHHHHHHhCCCCCCCCcceecccHHHHH
Q 018503          188 SPSGNDY-LAEVCREWEGTALKVN----KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIV  262 (355)
Q Consensus       188 ~~~~~~y-~~k~~~~~~~~~~~~~----~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva  262 (355)
                      .+....| .+|...+.+...+..+    .++++..++||.+..+.       ..  ...      .......+...+|+|
T Consensus       161 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~i~v~~v~PG~v~t~~-------~~--~~~------~~~~~~~~~~p~dva  225 (247)
T 3i1j_A          161 RANWGAYGVSKFATEGLMQTLADELEGVTAVRANSINPGATRTGM-------RA--QAY------PDENPLNNPAPEDIM  225 (247)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEECCCCSSHH-------HH--HHS------TTSCGGGSCCGGGGT
T ss_pred             CCCcchhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCcc-------ch--hcc------cccCccCCCCHHHHH
Confidence            2234567 7787666655544332    57999999999875541       11  000      011223467789999


Q ss_pred             HHHHHHHhCC
Q 018503          263 NLIYEALSNP  272 (355)
Q Consensus       263 ~~~~~~~~~~  272 (355)
                      ++++.++...
T Consensus       226 ~~~~~l~s~~  235 (247)
T 3i1j_A          226 PVYLYLMGPD  235 (247)
T ss_dssp             HHHHHHHSGG
T ss_pred             HHHHHHhCch
Confidence            9999999754

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...

Probab=99.74  E-value=8.4e-18  Score=146.79  Aligned_cols=200  Identities=14%  Similarity=0.050  Sum_probs=136.6

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCC----C-CCccCCCeeecCCcchhhhcC-------
Q 018503           48 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG----K-KTRFFPGVMIAEEPQWRDCIQ-------  115 (355)
Q Consensus        48 ~~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~----~-~~~~~~~~d~~~~~~~~~~~~-------  115 (355)
                      +.+++|+||||+|+||++++++|+++|++|++++|+.+........    . .......+|+.|.+++.++++       
T Consensus        26 ~~~k~vlITGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g  105 (286)
T 1xu9_A           26 LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMG  105 (286)
T ss_dssp             GTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHHT
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHHHHHHcC
Confidence            3457999999999999999999999999999999987654332110    0 000133468888887776654       


Q ss_pred             CCcEEEEC-CCCCCC--CCCChhhHHHHHHHhhhhHHHHHHHHHcC-CCCCCcEEEEeeeeeeeeCCCCCccccCCCCCC
Q 018503          116 GSTAVVNL-AGTPIG--TRWSSEIKKEIKESRIRVTSKVVDLINES-PEGVRPSVLVSATALGYYGTSETEVFDESSPSG  191 (355)
Q Consensus       116 ~~d~vi~~-a~~~~~--~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~  191 (355)
                      ++|++||+ |+....  ...+.+.....+++|+.++.++++++... ..+.+++|++||...  +..         .+..
T Consensus       106 ~iD~li~naag~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~g~iv~isS~~~--~~~---------~~~~  174 (286)
T 1xu9_A          106 GLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNGSIVVVSSLAG--KVA---------YPMV  174 (286)
T ss_dssp             SCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEGGG--TSC---------CTTC
T ss_pred             CCCEEEECCccCCCCccccCCHHHHHHHHHHHhhHHHHHHHHHHHHHHHCCCEEEEECCccc--ccC---------CCCc
Confidence            79999999 565322  12345667888999999999988877431 013468999999865  321         1234


Q ss_pred             Chh-HHHHHHHHHHHHhcc-----CCCCeEEEEEecEEEeCCCCcccchHHHHHHHhCCCCCCCCcceecccHHHHHHHH
Q 018503          192 NDY-LAEVCREWEGTALKV-----NKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLI  265 (355)
Q Consensus       192 ~~y-~~k~~~~~~~~~~~~-----~~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~  265 (355)
                      ..| .+|...+...+.+..     ..++++++++||.+..+..       .  ...      .+.....+++.+|+|+.+
T Consensus       175 ~~Y~asK~a~~~~~~~l~~e~~~~~~~i~v~~v~Pg~v~t~~~-------~--~~~------~~~~~~~~~~~~~vA~~i  239 (286)
T 1xu9_A          175 AAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTETA-------M--KAV------SGIVHMQAAPKEECALEI  239 (286)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCHHH-------H--HHS------CGGGGGGCBCHHHHHHHH
T ss_pred             cHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeecCccCChhH-------H--Hhc------cccccCCCCCHHHHHHHH
Confidence            567 777766655544332     3589999999998865421       0  000      011123578999999999


Q ss_pred             HHHHhCCC
Q 018503          266 YEALSNPS  273 (355)
Q Consensus       266 ~~~~~~~~  273 (355)
                      +.++..+.
T Consensus       240 ~~~~~~~~  247 (286)
T 1xu9_A          240 IKGGALRQ  247 (286)
T ss_dssp             HHHHHTTC
T ss_pred             HHHHhcCC
Confidence            99998764

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}

Probab=99.74  E-value=6.6e-17  Score=144.32  Aligned_cols=212  Identities=13%  Similarity=0.078  Sum_probs=143.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCC-----------CCCCccCCCeeecCCcchhhhcC--
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP-----------GKKTRFFPGVMIAEEPQWRDCIQ--  115 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-----------~~~~~~~~~~d~~~~~~~~~~~~--  115 (355)
                      .+++||||||+|.||++++++|+++|++|++++|+.++...+..           .........+|+.|.+++.++++  
T Consensus        44 ~gk~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~  123 (346)
T 3kvo_A           44 AGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDVRDEQQISAAVEKA  123 (346)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCEEEEeCCChHHHHHHHHHHHHCCCEEEEEECChhhhhhhHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHH
Confidence            45789999999999999999999999999999998865322110           01111134578999988877664  


Q ss_pred             -----CCcEEEECCCCCCC---CCCChhhHHHHHHHhhhhHHHHHHHHHcC--CCCCCcEEEEeeeeeeeeCCCCCcccc
Q 018503          116 -----GSTAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFD  185 (355)
Q Consensus       116 -----~~d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~~~~v~~Ss~~~~~yg~~~~~~~~  185 (355)
                           ++|++|||||....   .....+.+...+++|+.++..+++++...  ..+..++|++||...  +...      
T Consensus       124 ~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~~~--~~~~------  195 (346)
T 3kvo_A          124 IKKFGGIDILVNNASAISLTNTLDTPTKRLDLMMNVNTRGTYLASKACIPYLKKSKVAHILNISPPLN--LNPV------  195 (346)
T ss_dssp             HHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTCSSCEEEEECCCCC--CCGG------
T ss_pred             HHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCCEEEEECCHHH--cCCC------
Confidence                 79999999997532   23456777889999999999999987431  145679999999765  3210      


Q ss_pred             CCCCCCChh-HHHHHHHHHHHHhccC--CCCeEEEEEecEEEeCCCCcccchHHHHHHHhCCCCCCCCcceecccHHHHH
Q 018503          186 ESSPSGNDY-LAEVCREWEGTALKVN--KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIV  262 (355)
Q Consensus       186 e~~~~~~~y-~~k~~~~~~~~~~~~~--~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva  262 (355)
                       ..+....| .+|...+.+...+..+  .++.+..+.|+.+....      +..   ...+     ......+...+|+|
T Consensus       196 -~~~~~~~Y~aSKaal~~l~~~la~e~~~gIrvn~v~PG~~i~T~------~~~---~~~~-----~~~~~r~~~pedvA  260 (346)
T 3kvo_A          196 -WFKQHCAYTIAKYGMSMYVLGMAEEFKGEIAVNALWPKTAIHTA------AMD---MLGG-----PGIESQCRKVDIIA  260 (346)
T ss_dssp             -GTSSSHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEECSBCBCCH------HHH---HHCC-------CGGGCBCTHHHH
T ss_pred             -CCCCchHHHHHHHHHHHHHHHHHHHhcCCcEEEEEeCCCccccH------HHH---hhcc-----ccccccCCCHHHHH
Confidence             01234467 7787666555544433  48999999998633321      111   1111     11123467899999


Q ss_pred             HHHHHHHhCCC-CCCceEecCC
Q 018503          263 NLIYEALSNPS-YRGVINGTAP  283 (355)
Q Consensus       263 ~~~~~~~~~~~-~~~~~~i~~~  283 (355)
                      ++++.++.... ..|.+.+.++
T Consensus       261 ~~v~~L~s~~~~itG~~ivdgg  282 (346)
T 3kvo_A          261 DAAYSIFQKPKSFTGNFVIDEN  282 (346)
T ss_dssp             HHHHHHHTSCTTCCSCEEEHHH
T ss_pred             HHHHHHHhcCCCCCceEEECCc
Confidence            99999998732 3454445443

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}

Probab=99.73  E-value=4.2e-17  Score=142.16  Aligned_cols=202  Identities=12%  Similarity=0.057  Sum_probs=138.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCC-----------CCCCccCCCeeecCCcchhhhcC--
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP-----------GKKTRFFPGVMIAEEPQWRDCIQ--  115 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-----------~~~~~~~~~~d~~~~~~~~~~~~--  115 (355)
                      ++++++||||+|.||++++++|+++|++|++++|+.++...+..           .........+|+.|.+++.++++  
T Consensus         8 ~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   87 (285)
T 3sc4_A            8 RGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPIVGDIRDGDAVAAAVAKT   87 (285)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHHTSEEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHH
Confidence            45789999999999999999999999999999998764322100           00011134468889888877664  


Q ss_pred             -----CCcEEEECCCCCCC---CCCChhhHHHHHHHhhhhHHHHHHHHHcC--CCCCCcEEEEeeeeeeeeCCCCCcccc
Q 018503          116 -----GSTAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFD  185 (355)
Q Consensus       116 -----~~d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~~~~v~~Ss~~~~~yg~~~~~~~~  185 (355)
                           ++|++|||||....   ...+.+.+...+++|+.++..+++++...  ..+..++|++||...  +...      
T Consensus        88 ~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~--~~~~------  159 (285)
T 3sc4_A           88 VEQFGGIDICVNNASAINLGSIEEVPLKRFDLMNGIQVRGTYAVSQSCIPHMKGRDNPHILTLSPPIR--LEPK------  159 (285)
T ss_dssp             HHHHSCCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGTTTSSSCEEEECCCCCC--CSGG------
T ss_pred             HHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhh--ccCC------
Confidence                 78999999997533   23456777889999999999999988653  135678999999765  2210      


Q ss_pred             CCCCCCChh-HHHHHHHHHHHHhccC---CCCeEEEEEecEEEeCCCCcccchHHHHHHHhCCCCCCCCcceecccHHHH
Q 018503          186 ESSPSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDI  261 (355)
Q Consensus       186 e~~~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dv  261 (355)
                        .+....| .+|...+.+.+.+..+   .|+++..++||.+....      +..  ......     .....+...+|+
T Consensus       160 --~~~~~~Y~asKaal~~~~~~la~e~~~~gI~vn~v~PG~~v~t~------~~~--~~~~~~-----~~~~r~~~pedv  224 (285)
T 3sc4_A          160 --WLRPTPYMMAKYGMTLCALGIAEELRDAGIASNTLWPRTTVATA------AVQ--NLLGGD-----EAMARSRKPEVY  224 (285)
T ss_dssp             --GSCSHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECSSCBCCH------HHH--HHHTSC-----CCCTTCBCTHHH
T ss_pred             --CCCCchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeCCCccccH------HHH--hhcccc-----ccccCCCCHHHH
Confidence              0223567 7787766666555443   48999999998432211      111  111111     111236788999


Q ss_pred             HHHHHHHHhCCC
Q 018503          262 VNLIYEALSNPS  273 (355)
Q Consensus       262 a~~~~~~~~~~~  273 (355)
                      |++++.++..+.
T Consensus       225 A~~~~~l~s~~~  236 (285)
T 3sc4_A          225 ADAAYVVLNKPS  236 (285)
T ss_dssp             HHHHHHHHTSCT
T ss_pred             HHHHHHHhCCcc
Confidence            999999998764

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...

Probab=99.72  E-value=6.5e-17  Score=139.82  Aligned_cols=219  Identities=12%  Similarity=0.001  Sum_probs=144.0

Q ss_pred             CCCEEEEEcC--CchHHHHHHHHHHhCCCeEEEEecCCchh-hccCCC-CCCccCCCeeecCCcchhhhcC---------
Q 018503           49 SQMTVSVTGA--TGFIGRRLVQRLQADNHQVRVLTRSRSKA-ELIFPG-KKTRFFPGVMIAEEPQWRDCIQ---------  115 (355)
Q Consensus        49 ~~~~IlVtGa--tG~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~-~~~~~~~~~d~~~~~~~~~~~~---------  115 (355)
                      ++++++||||  +|+||++++++|+++|++|++++|+.+.. ...... ........+|+.|++++.++++         
T Consensus         6 ~~k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~   85 (269)
T 2h7i_A            6 DGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRLPAKAPLLELDVQNEEHLASLAGRVTEAIGAG   85 (269)
T ss_dssp             TTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTTSSSCCCEEECCTTCHHHHHHHHHHHHHHHCTT
T ss_pred             CCCEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecChHHHHHHHHHhcCCCceEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            4578999999  99999999999999999999999987542 222111 1111134579999888877664         


Q ss_pred             -CCcEEEECCCCCCC--------CCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCCCCccccC
Q 018503          116 -GSTAVVNLAGTPIG--------TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDE  186 (355)
Q Consensus       116 -~~d~vi~~a~~~~~--------~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e  186 (355)
                       ++|++|||||....        .....+.+...+++|+.++..+++++...-....++|++||...  ++         
T Consensus        86 ~~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~iss~~~--~~---------  154 (269)
T 2h7i_A           86 NKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPGGSIVGMDFDPS--RA---------  154 (269)
T ss_dssp             CCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECCCS--SC---------
T ss_pred             CCceEEEECCccCccccccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCeEEEEcCccc--cc---------
Confidence             78999999997531        23356677889999999999999998752011258999998654  32         


Q ss_pred             CCCCCChh-HHHHHHHHHHHHhcc---CCCCeEEEEEecEEEeCCCCcc------cchH---H-HH-HHHhCCCCCCCCc
Q 018503          187 SSPSGNDY-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGAL------AKMI---P-LF-MMFAGGPLGSGQQ  251 (355)
Q Consensus       187 ~~~~~~~y-~~k~~~~~~~~~~~~---~~~~~~~i~Rp~~i~G~~~~~~------~~~~---~-~~-~~~~~~~~~~~~~  251 (355)
                       .+....| .+|...+.+.+.+..   ..|+++..++||.+..+.....      ....   . .. ......+++    
T Consensus       155 -~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~----  229 (269)
T 2h7i_A          155 -MPAYNWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQRAPIG----  229 (269)
T ss_dssp             -CTTTHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHHHHHHHTTTTCHHHHHHHHHHHHHHHHHCTTC----
T ss_pred             -cCchHHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccchhhhccccccchhhHHHHHHHHHHhhhccCCcc----
Confidence             1223457 777766655554433   3589999999998866421100      0000   0 00 111111221    


Q ss_pred             ceecccHHHHHHHHHHHHhCCC---CCCceEecCCC
Q 018503          252 WFSWIHLDDIVNLIYEALSNPS---YRGVINGTAPN  284 (355)
Q Consensus       252 ~~~~i~v~Dva~~~~~~~~~~~---~~~~~~i~~~~  284 (355)
                       +.+...+|+|++++.++....   .+..+.+.+|.
T Consensus       230 -rr~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~  264 (269)
T 2h7i_A          230 -WNMKDATPVAKTVCALLSDWLPATTGDIIYADGGA  264 (269)
T ss_dssp             -CCTTCCHHHHHHHHHHHSSSCTTCCSEEEEESTTG
T ss_pred             -cCCCCHHHHHHHHHHHhCchhccCcceEEEecCCe
Confidence             136778999999999998643   33467776663

>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}

Probab=99.71  E-value=1.1e-16  Score=134.45  Aligned_cols=218  Identities=17%  Similarity=0.115  Sum_probs=147.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchh--hccCCCCCCccCCCeeecCCcchhhhcC--CCcEEEECC
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKA--ELIFPGKKTRFFPGVMIAEEPQWRDCIQ--GSTAVVNLA  124 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~--~~~~~~~~~~~~~~~d~~~~~~~~~~~~--~~d~vi~~a  124 (355)
                      ..++++||||++.||+++++.|.+.|.+|++.+|+....  ..............+|+.|++.+.++++  ++|++||||
T Consensus         8 ~GKvalVTGas~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~g~iDiLVNNA   87 (247)
T 4hp8_A            8 EGRKALVTGANTGLGQAIAVGLAAAGAEVVCAARRAPDETLDIIAKDGGNASALLIDFADPLAAKDSFTDAGFDILVNNA   87 (247)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTSTTTTTTSSTTTCCCEEEECC
T ss_pred             CCCEEEEeCcCCHHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHhCCCCEEEECC
Confidence            457999999999999999999999999999999986431  1111122112244578999998888775  689999999


Q ss_pred             CCCCC---CCCChhhHHHHHHHhhhhHHHHHHHHHc-C-C-CCCCcEEEEeeeeeeeeCCCCCccccCCCCCCChh-HHH
Q 018503          125 GTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINE-S-P-EGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-LAE  197 (355)
Q Consensus       125 ~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~~~-~-~-~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~~y-~~k  197 (355)
                      |....   .+.+.++++..+++|+.++..+.+++.. + . ....++|++||...  +..         .+....| .+|
T Consensus        88 Gi~~~~~~~~~~~~~w~~~~~vNl~g~f~~~~~~~~~m~~~g~~G~IVnisS~~~--~~g---------~~~~~~Y~asK  156 (247)
T 4hp8_A           88 GIIRRADSVEFSELDWDEVMDVNLKALFFTTQAFAKELLAKGRSGKVVNIASLLS--FQG---------GIRVPSYTAAK  156 (247)
T ss_dssp             CCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGG--TSC---------CSSCHHHHHHH
T ss_pred             CCCCCCCcccccHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCCcEEEEEechhh--CCC---------CCCChHHHHHH
Confidence            97533   3456788999999999998888876432 1 1 23468999999765  211         2234568 777


Q ss_pred             HHHHHHHHHhcc---CCCCeEEEEEecEEEeCCCCcccchHHHH-HHHhCCCCCCCCcceecccHHHHHHHHHHHHhCCC
Q 018503          198 VCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALAKMIPLF-MMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPS  273 (355)
Q Consensus       198 ~~~~~~~~~~~~---~~~~~~~i~Rp~~i~G~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~  273 (355)
                      .....+.+.+..   .+|+++..|.||.+..+.......-.... ......|++      .+-..+|+|.+++.++....
T Consensus       157 aav~~ltr~lA~Ela~~gIrVNaV~PG~i~T~~~~~~~~~~~~~~~~~~~~Plg------R~g~peeiA~~v~fLaSd~a  230 (247)
T 4hp8_A          157 HGVAGLTKLLANEWAAKGINVNAIAPGYIETNNTEALRADAARNKAILERIPAG------RWGHSEDIAGAAVFLSSAAA  230 (247)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTSHHHHHHHHTTCTTS------SCBCTHHHHHHHHHHTSGGG
T ss_pred             HHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCcchhhcccCHHHHHHHHhCCCCC------CCcCHHHHHHHHHHHhCchh
Confidence            655554444333   24899999999998766421110001111 222333332      25678999999999987654


Q ss_pred             ---CCCceEecCC
Q 018503          274 ---YRGVINGTAP  283 (355)
Q Consensus       274 ---~~~~~~i~~~  283 (355)
                         .+..+.+.+|
T Consensus       231 ~~iTG~~i~VDGG  243 (247)
T 4hp8_A          231 DYVHGAILNVDGG  243 (247)
T ss_dssp             TTCCSCEEEESTT
T ss_pred             cCCcCCeEEECcc
Confidence               3446767665

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}

Probab=99.71  E-value=1.1e-16  Score=138.77  Aligned_cols=201  Identities=15%  Similarity=0.083  Sum_probs=136.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCC-----------CCCccCCCeeecCCcchhhhcC--
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-----------KKTRFFPGVMIAEEPQWRDCIQ--  115 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-----------~~~~~~~~~d~~~~~~~~~~~~--  115 (355)
                      ++++++||||+|.||++++++|+++|++|++++|+.+........           ........+|+.|.+++.++++  
T Consensus         5 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   84 (274)
T 3e03_A            5 SGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALKCDIREEDQVRAAVAAT   84 (274)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCSCCTTSCCCHHHHHHHHHHHTSEEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeccchhhhhhHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHH
Confidence            457999999999999999999999999999999987653222110           0001134578889888776664  


Q ss_pred             -----CCcEEEECCCCCCC---CCCChhhHHHHHHHhhhhHHHHHHHHHcC--CCCCCcEEEEeeeeeeeeCCCCCcccc
Q 018503          116 -----GSTAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFD  185 (355)
Q Consensus       116 -----~~d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~~~~v~~Ss~~~~~yg~~~~~~~~  185 (355)
                           ++|++|||||....   .....+.+...+++|+.++..+++++...  ..+..++|++||...  +...   +  
T Consensus        85 ~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~--~~~~---~--  157 (274)
T 3e03_A           85 VDTFGGIDILVNNASAIWLRGTLDTPMKRFDLMQQVNARGSFVCAQACLPHLLQAPNPHILTLAPPPS--LNPA---W--  157 (274)
T ss_dssp             HHHHSCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHTHHHHHHHHHHHHHHHTTSSSCEEEECCCCCC--CCHH---H--
T ss_pred             HHHcCCCCEEEECCCcccCCCcccCCHHHHHHHHhHhhHhHHHHHHHHHHHHHhcCCceEEEECChHh--cCCC---C--
Confidence                 78999999997532   23456777889999999999998876431  145678999999765  3210   0  


Q ss_pred             CCCCCCChh-HHHHHHHHHHHHhccC---CCCeEEEEEecEEEeCCCCcccchHHHHHHHhCCCCCCCCcceecccHHHH
Q 018503          186 ESSPSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDI  261 (355)
Q Consensus       186 e~~~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dv  261 (355)
                        .+....| .+|...+.+.+.+..+   .|+++..++||.+......   ..      ..+      .....+...+|+
T Consensus       158 --~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~~v~T~~~---~~------~~~------~~~~~~~~pedv  220 (274)
T 3e03_A          158 --WGAHTGYTLAKMGMSLVTLGLAAEFGPQGVAINALWPRTVIATDAI---NM------LPG------VDAAACRRPEIM  220 (274)
T ss_dssp             --HHHCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECSBCBCC----------------C------CCGGGSBCTHHH
T ss_pred             --CCCCchHHHHHHHHHHHHHHHHHHhhhcCEEEEEEECCcccccchh---hh------ccc------ccccccCCHHHH
Confidence              1123457 7777666655544432   4899999999954332211   00      111      112236789999


Q ss_pred             HHHHHHHHhCCC
Q 018503          262 VNLIYEALSNPS  273 (355)
Q Consensus       262 a~~~~~~~~~~~  273 (355)
                      |++++.++....
T Consensus       221 A~~v~~l~s~~~  232 (274)
T 3e03_A          221 ADAAHAVLTREA  232 (274)
T ss_dssp             HHHHHHHHTSCC
T ss_pred             HHHHHHHhCccc
Confidence            999999998654

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}

Probab=99.71  E-value=1e-16  Score=135.92  Aligned_cols=219  Identities=15%  Similarity=0.080  Sum_probs=147.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCC----CCCCccCCCeeecCCcchhhhc-------CCC
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP----GKKTRFFPGVMIAEEPQWRDCI-------QGS  117 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~~d~~~~~~~~~~~-------~~~  117 (355)
                      +.|+++||||++.||+++++.|+++|.+|++++|+.+.......    .........+|+.|++++++++       ..+
T Consensus         6 ~gKvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~G~i   85 (254)
T 4fn4_A            6 KNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKEVLGVKADVSKKKDVEEFVRRTFETYSRI   85 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            45799999999999999999999999999999998766543221    1111224457999998887666       368


Q ss_pred             cEEEECCCCCCC----CCCChhhHHHHHHHhhhhHHHHHHHHHcC--CCCCCcEEEEeeeeeeeeCCCCCccccCCCCCC
Q 018503          118 TAVVNLAGTPIG----TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSG  191 (355)
Q Consensus       118 d~vi~~a~~~~~----~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~  191 (355)
                      |++|||||....    .+.+.+.++..+++|+.++..+.+++...  +.+..++|++||...  +-.         .+..
T Consensus        86 DiLVNNAGi~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~~g--~~~---------~~~~  154 (254)
T 4fn4_A           86 DVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLKQGKGVIVNTASIAG--IRG---------GFAG  154 (254)
T ss_dssp             CEEEECCCCCCTTCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGG--TCS---------SSSC
T ss_pred             CEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEechhh--cCC---------CCCC
Confidence            999999996422    34567888999999999988887765431  135678999999765  211         1234


Q ss_pred             Chh-HHHHHHHHHHHHhcc---CCCCeEEEEEecEEEeCCCCc-cc-chHHHHHHHhC-CCCCCCCcceecccHHHHHHH
Q 018503          192 NDY-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGA-LA-KMIPLFMMFAG-GPLGSGQQWFSWIHLDDIVNL  264 (355)
Q Consensus       192 ~~y-~~k~~~~~~~~~~~~---~~~~~~~i~Rp~~i~G~~~~~-~~-~~~~~~~~~~~-~~~~~~~~~~~~i~v~Dva~~  264 (355)
                      ..| .+|.....+.+.+..   .+|+++..+.||.+-.+.... .. .-......... .+.+      .+...+|+|.+
T Consensus       155 ~~Y~asKaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~------R~g~pediA~~  228 (254)
T 4fn4_A          155 APYTVAKHGLIGLTRSIAAHYGDQGIRAVAVLPGTVKTNIGLGSSKPSELGMRTLTKLMSLSS------RLAEPEDIANV  228 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSCTTSCSSCCHHHHHHHHHHHTTCC------CCBCHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCCCCcccccccCCcHHHHHHHHhcCCCCC------CCcCHHHHHHH
Confidence            568 777655554444333   248999999999997664211 10 00000011111 1111      25678999999


Q ss_pred             HHHHHhCCC---CCCceEecCCC
Q 018503          265 IYEALSNPS---YRGVINGTAPN  284 (355)
Q Consensus       265 ~~~~~~~~~---~~~~~~i~~~~  284 (355)
                      ++.++....   .+..+.+.+|-
T Consensus       229 v~fLaSd~a~~iTG~~i~VDGG~  251 (254)
T 4fn4_A          229 IVFLASDEASFVNGDAVVVDGGL  251 (254)
T ss_dssp             HHHHHSGGGTTCCSCEEEESTTG
T ss_pred             HHHHhCchhcCCcCCEEEeCCCc
Confidence            999997544   44577777663

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}

Probab=99.70  E-value=3.7e-17  Score=139.97  Aligned_cols=219  Identities=15%  Similarity=0.049  Sum_probs=147.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCC-CCCccCCCeeecCCcchhhhcC-------CCcEE
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-KKTRFFPGVMIAEEPQWRDCIQ-------GSTAV  120 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~-------~~d~v  120 (355)
                      +.|.++||||++.||+++++.|+++|.+|++.+|+.+........ ........+|+.|+++++++++       ++|++
T Consensus        28 ~gKvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDiL  107 (273)
T 4fgs_A           28 NAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEIGGGAVGIQADSANLAELDRLYEKVKAEAGRIDVL  107 (273)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCEEEE
T ss_pred             CCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCCeEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            457899999999999999999999999999999998765433211 1111234579999888776653       68999


Q ss_pred             EECCCCCCC---CCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCChh-HH
Q 018503          121 VNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-LA  196 (355)
Q Consensus       121 i~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~~y-~~  196 (355)
                      ||+||....   .+.+.+.++..+++|+.++..+++++...-....++|++||...  +..         .+....| .+
T Consensus       108 VNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~G~IInisS~~~--~~~---------~~~~~~Y~as  176 (273)
T 4fgs_A          108 FVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARGSSVVLTGSTAG--STG---------TPAFSVYAAS  176 (273)
T ss_dssp             EECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGG--GSC---------CTTCHHHHHH
T ss_pred             EECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCeEEEEeehhh--ccC---------CCCchHHHHH
Confidence            999997533   34567888999999999999999988663123357999998765  211         2234568 77


Q ss_pred             HHHHHHHHHHhcc---CCCCeEEEEEecEEEeCCCCccc-c---h-HHHH-HHHhCCCCCCCCcceecccHHHHHHHHHH
Q 018503          197 EVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALA-K---M-IPLF-MMFAGGPLGSGQQWFSWIHLDDIVNLIYE  267 (355)
Q Consensus       197 k~~~~~~~~~~~~---~~~~~~~i~Rp~~i~G~~~~~~~-~---~-~~~~-~~~~~~~~~~~~~~~~~i~v~Dva~~~~~  267 (355)
                      |.....+.+.+..   .+|+++..|.||.+..+...... .   . -... ......|++      .+...+|+|++++.
T Consensus       177 Kaav~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~Plg------R~g~peeiA~~v~F  250 (273)
T 4fgs_A          177 KAALRSFARNWILDLKDRGIRINTLSPGPTETTGLVELAGKDPVQQQGLLNALAAQVPMG------RVGRAEEVAAAALF  250 (273)
T ss_dssp             HHHHHHHHHHHHHHTTTSCEEEEEEEECSBCC---------CHHHHHHHHHHHHHHSTTS------SCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhcccCeEEEEEeeCCCCChhHHHhhccCchhhHHHHHHHHhcCCCC------CCcCHHHHHHHHHH
Confidence            7666555554443   34899999999998765421110 0   0 0011 122223332      26778999999999


Q ss_pred             HHhCCC---CCCceEecCCC
Q 018503          268 ALSNPS---YRGVINGTAPN  284 (355)
Q Consensus       268 ~~~~~~---~~~~~~i~~~~  284 (355)
                      ++....   .+..+.+.+|.
T Consensus       251 LaSd~a~~iTG~~i~VDGG~  270 (273)
T 4fgs_A          251 LASDDSSFVTGAELFVDGGS  270 (273)
T ss_dssp             HHSGGGTTCCSCEEEESTTT
T ss_pred             HhCchhcCccCCeEeECcCh
Confidence            997644   44577776663

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}

Probab=99.70  E-value=5.6e-17  Score=137.56  Aligned_cols=218  Identities=12%  Similarity=0.060  Sum_probs=146.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccC----CCCCCccCCCeeecCCcchhhhcC-------CC
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIF----PGKKTRFFPGVMIAEEPQWRDCIQ-------GS  117 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~~~~~~~~~~~d~~~~~~~~~~~~-------~~  117 (355)
                      +.++++||||++.||+++++.|+++|++|++.+|+.+...+..    ..........+|+.|+++++++++       ++
T Consensus         8 ~gKvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~i   87 (255)
T 4g81_D            8 TGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYDAHGVAFDVTDELAIEAAFSKLDAEGIHV   87 (255)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHTTCCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHCCCC
Confidence            4579999999999999999999999999999999876543321    111112245689999988876653       68


Q ss_pred             cEEEECCCCCCC---CCCChhhHHHHHHHhhhhHHHHHHHHHc-C--CCCCCcEEEEeeeeeeeeCCCCCccccCCCCCC
Q 018503          118 TAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINE-S--PEGVRPSVLVSATALGYYGTSETEVFDESSPSG  191 (355)
Q Consensus       118 d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~~~-~--~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~  191 (355)
                      |++|||||....   .+.+.++++..+++|+.++..+.+++.. +  +.+..++|++||...  +..         .+..
T Consensus        88 DiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~~G~IVnisS~~~--~~~---------~~~~  156 (255)
T 4g81_D           88 DILINNAGIQYRKPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNSGGKIINIGSLTS--QAA---------RPTV  156 (255)
T ss_dssp             CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGG--TSB---------CTTC
T ss_pred             cEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHccCCCEEEEEeehhh--cCC---------CCCc
Confidence            999999997543   3456788899999999998888776532 1  135568999999765  211         2234


Q ss_pred             Chh-HHHHHHHHHHHHhcc---CCCCeEEEEEecEEEeCCCCcccchHHHH-HHHhCCCCCCCCcceecccHHHHHHHHH
Q 018503          192 NDY-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALAKMIPLF-MMFAGGPLGSGQQWFSWIHLDDIVNLIY  266 (355)
Q Consensus       192 ~~y-~~k~~~~~~~~~~~~---~~~~~~~i~Rp~~i~G~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~v~Dva~~~~  266 (355)
                      ..| .+|.....+.+.+..   .+|+++..+.||.+..+.......--... ......|++      .+...+|+|.+++
T Consensus       157 ~~Y~asKaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~Pl~------R~g~pediA~~v~  230 (255)
T 4g81_D          157 APYTAAKGGIKMLTCSMAAEWAQFNIQTNAIGPGYILTDMNTALIEDKQFDSWVKSSTPSQ------RWGRPEELIGTAI  230 (255)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGHHHHTCHHHHHHHHHHSTTC------SCBCGGGGHHHHH
T ss_pred             hhHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCCCchhhcccCCHHHHHHHHhCCCCC------CCcCHHHHHHHHH
Confidence            567 777655555444433   35899999999999766421110000001 111222332      2567799999999


Q ss_pred             HHHhCCC---CCCceEecCC
Q 018503          267 EALSNPS---YRGVINGTAP  283 (355)
Q Consensus       267 ~~~~~~~---~~~~~~i~~~  283 (355)
                      .++....   .+..+.+.+|
T Consensus       231 fL~S~~a~~iTG~~i~VDGG  250 (255)
T 4g81_D          231 FLSSKASDYINGQIIYVDGG  250 (255)
T ss_dssp             HHHSGGGTTCCSCEEEESTT
T ss_pred             HHhCchhCCCcCCEEEECCC
Confidence            9997543   4447777665

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*

Probab=99.69  E-value=2.4e-17  Score=143.35  Aligned_cols=220  Identities=14%  Similarity=0.054  Sum_probs=143.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCC-CCccCCCeeecCCcchhhhcC-------CCcEE
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGK-KTRFFPGVMIAEEPQWRDCIQ-------GSTAV  120 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~~-------~~d~v  120 (355)
                      .+++++||||+|+||++++++|+++|++|++++|+.+......... .......+|+.|.+++.++++       ++|++
T Consensus         4 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~l   83 (281)
T 3zv4_A            4 TGEVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVAHGGNAVGVVGDVRSLQDQKRAAERCLAAFGKIDTL   83 (281)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTBTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHHHHHhcCCCCEE
Confidence            3578999999999999999999999999999999876654332110 011134568888887766653       68999


Q ss_pred             EECCCCCCCC--------CCChhhHHHHHHHhhhhHHHHHHHHHcC-CCCCCcEEEEeeeeeeeeCCCCCccccCCCCCC
Q 018503          121 VNLAGTPIGT--------RWSSEIKKEIKESRIRVTSKVVDLINES-PEGVRPSVLVSATALGYYGTSETEVFDESSPSG  191 (355)
Q Consensus       121 i~~a~~~~~~--------~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~  191 (355)
                      ||+||.....        ....+.++..+++|+.++..+++++... .....++|++||...  +..         .+..
T Consensus        84 vnnAg~~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~g~iv~isS~~~--~~~---------~~~~  152 (281)
T 3zv4_A           84 IPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKGYIHAVKACLPALVSSRGSVVFTISNAG--FYP---------NGGG  152 (281)
T ss_dssp             ECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGG--TSS---------SSSC
T ss_pred             EECCCcCccccccccCChhhhHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCeEEEEecchh--ccC---------CCCC
Confidence            9999974211        1112346778899999999998877441 012368999999765  321         1234


Q ss_pred             Chh-HHHHHHHHHHHHhccC--CCCeEEEEEecEEEeCCCCcccc-h----H---HHH-HHHhCCCCCCCCcceecccHH
Q 018503          192 NDY-LAEVCREWEGTALKVN--KDVRLALIRIGIVLGKDGGALAK-M----I---PLF-MMFAGGPLGSGQQWFSWIHLD  259 (355)
Q Consensus       192 ~~y-~~k~~~~~~~~~~~~~--~~~~~~i~Rp~~i~G~~~~~~~~-~----~---~~~-~~~~~~~~~~~~~~~~~i~v~  259 (355)
                      ..| .+|...+.+...+..+  ..+++..+.||.+..+....... .    .   +.. ......++      ..+...+
T Consensus       153 ~~Y~asKaa~~~l~~~la~e~~~~Irvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~------~r~~~pe  226 (281)
T 3zv4_A          153 PLYTATKHAVVGLVRQMAFELAPHVRVNGVAPGGMNTDLRGPSSLGLSEQSISSVPLADMLKSVLPI------GRMPALE  226 (281)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEECSSCC--CCCTTCC--------CCHHHHHHHTCTT------SSCCCGG
T ss_pred             chhHHHHHHHHHHHHHHHHHhcCCCEEEEEECCcCcCCcccccccccccccccchhHHHHHHhcCCC------CCCCCHH
Confidence            467 7787766665554433  23999999999998764221100 0    0   001 11122222      2367889


Q ss_pred             HHHHHHHHHHhCCC----CCCceEecCCCc
Q 018503          260 DIVNLIYEALSNPS----YRGVINGTAPNP  285 (355)
Q Consensus       260 Dva~~~~~~~~~~~----~~~~~~i~~~~~  285 (355)
                      |+|++++.++..+.    .+..+++.+|..
T Consensus       227 dvA~~v~fL~s~~~~~~itG~~i~vdGG~~  256 (281)
T 3zv4_A          227 EYTGAYVFFATRGDSLPATGALLNYDGGMG  256 (281)
T ss_dssp             GGSHHHHHHHSTTTSTTCSSCEEEESSSGG
T ss_pred             HHHHHHHHhhcccccccccCcEEEECCCCc
Confidence            99999999998332    345888887753

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ...

Probab=99.69  E-value=1.5e-16  Score=141.33  Aligned_cols=214  Identities=14%  Similarity=0.056  Sum_probs=137.5

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCC----------CCCCccCCCeeecCCcchhhhcC-----
Q 018503           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP----------GKKTRFFPGVMIAEEPQWRDCIQ-----  115 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----------~~~~~~~~~~d~~~~~~~~~~~~-----  115 (355)
                      ++|+||||+|+||++++++|+++|++|+++.|+.........          .........+|+.|.+++.++++     
T Consensus         3 k~vlVTGas~GIG~ala~~L~~~G~~v~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~g   82 (327)
T 1jtv_A            3 TVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVTEG   82 (327)
T ss_dssp             EEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCTTS
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCceEEEEeecCcHHHHHHHHHHhhhccCCCCceEEEEecCCCHHHHHHHHHHHhcC
Confidence            589999999999999999999999999888876543221100          00001133578889998888775     


Q ss_pred             CCcEEEECCCCCCC---CCCChhhHHHHHHHhhhhHHHHHHHH----HcCCCCCCcEEEEeeeeeeeeCCCCCccccCCC
Q 018503          116 GSTAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLI----NESPEGVRPSVLVSATALGYYGTSETEVFDESS  188 (355)
Q Consensus       116 ~~d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~----~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~  188 (355)
                      .+|++|||||....   .....+.+...+++|+.++.++++++    ++  .+.+++|++||...  +..         .
T Consensus        83 ~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~--~~~g~IV~isS~~~--~~~---------~  149 (327)
T 1jtv_A           83 RVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKR--RGSGRVLVTGSVGG--LMG---------L  149 (327)
T ss_dssp             CCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHH--HTCEEEEEEEEGGG--TSC---------C
T ss_pred             CCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh--cCCCEEEEECCccc--ccC---------C
Confidence            38999999997432   13356677899999999999999885    33  35679999999865  321         1


Q ss_pred             CCCChh-HHHHHHHHHHHHhcc---CCCCeEEEEEecEEEeCCCCcccchH--------HHH-HHHhCCCCCCCC--cce
Q 018503          189 PSGNDY-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALAKMI--------PLF-MMFAGGPLGSGQ--QWF  253 (355)
Q Consensus       189 ~~~~~y-~~k~~~~~~~~~~~~---~~~~~~~i~Rp~~i~G~~~~~~~~~~--------~~~-~~~~~~~~~~~~--~~~  253 (355)
                      +....| .+|...+.+...+..   ..|+++++++||.+..+.........        +.. ..... ......  ..+
T Consensus       150 ~~~~~Y~aSK~a~~~~~~~la~el~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~  228 (327)
T 1jtv_A          150 PFNDVYCASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAFMEKVLGSPEEVLDRTDIHTFHRFYQ-YLAHSKQVFRE  228 (327)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC-------CCHHHHHHTSCHHHHHHHHH-HHHHHHHHHHH
T ss_pred             CCChHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCcccChHHhhhhhcchhhhccCCHHHHHHHHH-HHHHHHHhhhh
Confidence            234567 778777766655544   35899999999999876422110000        000 00000 000000  001


Q ss_pred             ecccHHHHHHHHHHHHhCCCCCCce
Q 018503          254 SWIHLDDIVNLIYEALSNPSYRGVI  278 (355)
Q Consensus       254 ~~i~v~Dva~~~~~~~~~~~~~~~~  278 (355)
                      -....+|+|++++.++..+.....|
T Consensus       229 ~~~~pedvA~~i~~l~~~~~~~~~~  253 (327)
T 1jtv_A          229 AAQNPEEVAEVFLTALRAPKPTLRY  253 (327)
T ss_dssp             HCBCHHHHHHHHHHHHHCSSCCSEE
T ss_pred             cCCCHHHHHHHHHHHHcCCCCCeEE
Confidence            1258999999999999876533444

>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*

Probab=99.69  E-value=9e-18  Score=149.11  Aligned_cols=166  Identities=14%  Similarity=0.140  Sum_probs=116.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCC-------eEEEEecCCc--hhh----ccCCCCCCccCCCeeecCCcchhhhcC
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNH-------QVRVLTRSRS--KAE----LIFPGKKTRFFPGVMIAEEPQWRDCIQ  115 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~-------~V~~~~r~~~--~~~----~~~~~~~~~~~~~~d~~~~~~~~~~~~  115 (355)
                      ++|||+||||+||||++++..|++.|+       +|+++++...  ...    .+.....  .+. .|+.+.+.+.++++
T Consensus         3 ~~mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~~~~~~~~g~~~dl~~~~~--~~~-~di~~~~~~~~a~~   79 (327)
T 1y7t_A            3 APVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAF--PLL-AGLEATDDPKVAFK   79 (327)
T ss_dssp             CCEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTC--TTE-EEEEEESCHHHHTT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCCCchhhccchhhhhhcccc--ccc-CCeEeccChHHHhC
Confidence            347999999999999999999999986       8999998642  111    1111000  022 47777777888899


Q ss_pred             CCcEEEECCCCCCCCCCChhhHHHHHHHhhhhHHHHHHHHHcCCCC-CC-cEEEEeeeeeeeeCCCCCcccc-CC---CC
Q 018503          116 GSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEG-VR-PSVLVSATALGYYGTSETEVFD-ES---SP  189 (355)
Q Consensus       116 ~~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~-~~-~~v~~Ss~~~~~yg~~~~~~~~-e~---~~  189 (355)
                      ++|+|||+||.+...   .....++++.|+.++.++++++++  .+ .+ +++++|+....      ..+.. +.   .+
T Consensus        80 ~~D~Vih~Ag~~~~~---~~~~~~~~~~Nv~~t~~l~~a~~~--~~~~~~~vvv~snp~~~------~~~~~~~~~~~~~  148 (327)
T 1y7t_A           80 DADYALLVGAAPRKA---GMERRDLLQVNGKIFTEQGRALAE--VAKKDVKVLVVGNPANT------NALIAYKNAPGLN  148 (327)
T ss_dssp             TCSEEEECCCCCCCT---TCCHHHHHHHHHHHHHHHHHHHHH--HSCTTCEEEECSSSHHH------HHHHHHHTCTTSC
T ss_pred             CCCEEEECCCcCCCC---CCCHHHHHHHHHHHHHHHHHHHHh--hcCCCeEEEEeCCchhh------hHHHHHHHcCCCC
Confidence            999999999975322   234568899999999999999998  43 43 66666653210      00111 11   22


Q ss_pred             CCChh-HHHHHHHHHHHHhccCCCCeEEEEEecEEEeCCC
Q 018503          190 SGNDY-LAEVCREWEGTALKVNKDVRLALIRIGIVLGKDG  228 (355)
Q Consensus       190 ~~~~y-~~k~~~~~~~~~~~~~~~~~~~i~Rp~~i~G~~~  228 (355)
                      +...| .+|...+.....+....|++.+++|++++||++.
T Consensus       149 p~~~yg~tkl~~er~~~~~a~~~g~~~~~vr~~~V~G~h~  188 (327)
T 1y7t_A          149 PRNFTAMTRLDHNRAKAQLAKKTGTGVDRIRRMTVWGNHS  188 (327)
T ss_dssp             GGGEEECCHHHHHHHHHHHHHHHTCCGGGEECCEEEBCSS
T ss_pred             hhheeccchHHHHHHHHHHHHHhCcChhheeeeEEEcCCC
Confidence            33456 6777677766666666799999999999999875

>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*

Probab=99.69  E-value=2.5e-16  Score=146.78  Aligned_cols=219  Identities=16%  Similarity=0.138  Sum_probs=148.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCe-EEEEecCCchhh-------ccCCCCCCccCCCeeecCCcchhhhcCC----
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQ-VRVLTRSRSKAE-------LIFPGKKTRFFPGVMIAEEPQWRDCIQG----  116 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~-V~~~~r~~~~~~-------~~~~~~~~~~~~~~d~~~~~~~~~~~~~----  116 (355)
                      ..++||||||+|+||.+++++|+++|++ |++++|+.....       .+...........+|+.|.+++.+++++    
T Consensus       225 ~~~~vLITGgtGgIG~~la~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~i~~~  304 (486)
T 2fr1_A          225 PTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGIGDD  304 (486)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCTT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCCEEEEEcCCCCCcHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHHHHHhc
Confidence            4579999999999999999999999985 999999875211       1111111111345788999988888765    


Q ss_pred             --CcEEEECCCCCCC---CCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCCCCccccCCCCCC
Q 018503          117 --STAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSG  191 (355)
Q Consensus       117 --~d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~  191 (355)
                        +|+|||+||....   .....+.....+++|+.++.++.+++..  .+.++||++||.... +|.          +..
T Consensus       305 g~ld~VIh~AG~~~~~~l~~~~~~~~~~~~~~nv~g~~~L~~~~~~--~~~~~~V~~SS~a~~-~g~----------~g~  371 (486)
T 2fr1_A          305 VPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTRE--LDLTAFVLFSSFASA-FGA----------PGL  371 (486)
T ss_dssp             SCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTT--SCCSEEEEEEEHHHH-TCC----------TTC
T ss_pred             CCCcEEEECCccCCCCccccCCHHHHHHHHHHHHHHHHHHHHHhCc--CCCCEEEEEcChHhc-CCC----------CCC
Confidence              4999999997533   2345667788899999999999999988  678899999997652 442          123


Q ss_pred             Chh-HHHHHHHHHHHHhccCCCCeEEEEEecEEEeCCCCcccchHHHHHHHhCCCCCCCCcceecccHHHHHHHHHHHHh
Q 018503          192 NDY-LAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALS  270 (355)
Q Consensus       192 ~~y-~~k~~~~~~~~~~~~~~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~  270 (355)
                      ..| .+|...+.+...+. ..|+++++++||.+.+.+....  .   .    ...+  ......+++.+|+++++..++.
T Consensus       372 ~~Yaaaka~l~~la~~~~-~~gi~v~~i~pG~~~~~gm~~~--~---~----~~~~--~~~g~~~i~~e~~a~~l~~~l~  439 (486)
T 2fr1_A          372 GGYAPGNAYLDGLAQQRR-SDGLPATAVAWGTWAGSGMAEG--P---V----ADRF--RRHGVIEMPPETACRALQNALD  439 (486)
T ss_dssp             TTTHHHHHHHHHHHHHHH-HTTCCCEEEEECCBC---------------------C--TTTTEECBCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHH-hcCCeEEEEECCeeCCCcccch--h---H----HHHH--HhcCCCCCCHHHHHHHHHHHHh
Confidence            457 67766666555444 3599999999999877642110  0   0    0001  1123568999999999999998


Q ss_pred             CCCCCCceEecCCCccCHHHHHHHHHH
Q 018503          271 NPSYRGVINGTAPNPVRLAEMCDHLGN  297 (355)
Q Consensus       271 ~~~~~~~~~i~~~~~~s~~el~~~i~~  297 (355)
                      .+..  .+.+.   .+.|..+...+..
T Consensus       440 ~~~~--~~~v~---~~d~~~~~~~~~~  461 (486)
T 2fr1_A          440 RAEV--CPIVI---DVRWDRFLLAYTA  461 (486)
T ss_dssp             TTCS--SCEEC---EECHHHHHHHHTS
T ss_pred             CCCC--eEEEE---eCCHHHHhhhhcc
Confidence            7642  33333   2667777665543

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0

Probab=99.69  E-value=2.2e-16  Score=139.44  Aligned_cols=211  Identities=14%  Similarity=0.114  Sum_probs=139.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccC----CCC-CCccCCCeeecCC-cchhhhc-------C
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIF----PGK-KTRFFPGVMIAEE-PQWRDCI-------Q  115 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~~~-~~~~~~~~d~~~~-~~~~~~~-------~  115 (355)
                      .+++|+||||+|+||++++++|+++|++|++++|+..+.....    ... .......+|+.|. +.+.+++       .
T Consensus        11 ~~k~vlITGas~GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~v~~~~~~~~~~~g   90 (311)
T 3o26_A           11 KRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVTDPIATMSSLADFIKTHFG   90 (311)
T ss_dssp             -CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCSEEEEECCTTSCHHHHHHHHHHHHHHHS
T ss_pred             CCcEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEccCCCcHHHHHHHHHHHHHhCC
Confidence            4578999999999999999999999999999999976543221    111 0111345788888 6665554       3


Q ss_pred             CCcEEEECCCCCCC---------------------------------CCCChhhHHHHHHHhhhhHHHHHHHHHcC--CC
Q 018503          116 GSTAVVNLAGTPIG---------------------------------TRWSSEIKKEIKESRIRVTSKVVDLINES--PE  160 (355)
Q Consensus       116 ~~d~vi~~a~~~~~---------------------------------~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~  160 (355)
                      ++|++||+||....                                 .....+.....+++|+.++..+++++...  ..
T Consensus        91 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~  170 (311)
T 3o26_A           91 KLDILVNNAGVAGFSVDADRFKAMISDIGEDSEELVKIYEKPEAQELMSETYELAEECLKINYNGVKSVTEVLIPLLQLS  170 (311)
T ss_dssp             SCCEEEECCCCCSCEECHHHHHHHHHHHCSSTTHHHHHTTSHHHHTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTS
T ss_pred             CCCEEEECCcccccccccchhhhcccccccchhhcchhhcccchhcccccchhhhhhheeeeeehHHHHHHHhhHhhccC
Confidence            79999999997521                                 12244556778999999988888876431  14


Q ss_pred             CCCcEEEEeeeeeeeeCCCCCc-------------------------------cccCCC--CCCChh-HHHHHHHHHHHH
Q 018503          161 GVRPSVLVSATALGYYGTSETE-------------------------------VFDESS--PSGNDY-LAEVCREWEGTA  206 (355)
Q Consensus       161 ~~~~~v~~Ss~~~~~yg~~~~~-------------------------------~~~e~~--~~~~~y-~~k~~~~~~~~~  206 (355)
                      +..++|++||.... ++.....                               ......  +....| .+|...+.....
T Consensus       171 ~~~~IV~isS~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~  249 (311)
T 3o26_A          171 DSPRIVNVSSSTGS-LKYVSNETALEILGDGDALTEERIDMVVNMLLKDFKENLIETNGWPSFGAAYTTSKACLNAYTRV  249 (311)
T ss_dssp             SSCEEEEECCGGGS-GGGCCCHHHHHHHHCGGGCCHHHHHHHHHHHHHHHHTTCTTTTTCCSSCHHHHHHHHHHHHHHHH
T ss_pred             CCCeEEEEecCCcc-cccccchhhhhhhccccccchhHHHHHHHHHHhhhhccccccccCcccchhhHHHHHHHHHHHHH
Confidence            56799999997652 2211000                               000111  123458 888877777766


Q ss_pred             hccCC-CCeEEEEEecEEEeCCCCcccchHHHHHHHhCCCCCCCCcceecccHHHHHHHHHHHHhCCC--CCCceEecC
Q 018503          207 LKVNK-DVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPS--YRGVINGTA  282 (355)
Q Consensus       207 ~~~~~-~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~--~~~~~~i~~  282 (355)
                      +..+. ++++..++||.+..+....                      ......++.|+.++.++..+.  ..+.|..++
T Consensus       250 la~e~~~i~v~~v~PG~v~T~~~~~----------------------~~~~~~~~~a~~~~~~~~~~~~~~~g~~~~~s  306 (311)
T 3o26_A          250 LANKIPKFQVNCVCPGLVKTEMNYG----------------------IGNYTAEEGAEHVVRIALFPDDGPSGFFYDCS  306 (311)
T ss_dssp             HHHHCTTSEEEEECCCSBCSGGGTT----------------------CCSBCHHHHHHHHHHHHTCCSSCCCSCEETC-
T ss_pred             HHhhcCCceEEEecCCceecCCcCC----------------------CCCCCHHHHHHHHHHHHhCCCCCCCceEeccc
Confidence            65553 6899999999887653111                      112578899999999887654  345555444

>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*

Probab=99.68  E-value=1e-15  Score=130.71  Aligned_cols=213  Identities=16%  Similarity=0.100  Sum_probs=141.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhc-------CCCcEEE
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCI-------QGSTAVV  121 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~-------~~~d~vi  121 (355)
                      ..|++|||||++.||+++++.|++.|++|++.+|+......  .    .....+|+.+++++.+++       .++|++|
T Consensus        10 ~GK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~--~----~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDilV   83 (261)
T 4h15_A           10 RGKRALITAGTKGAGAATVSLFLELGAQVLTTARARPEGLP--E----ELFVEADLTTKEGCAIVAEATRQRLGGVDVIV   83 (261)
T ss_dssp             TTCEEEESCCSSHHHHHHHHHHHHTTCEEEEEESSCCTTSC--T----TTEEECCTTSHHHHHHHHHHHHHHTSSCSEEE
T ss_pred             CCCEEEEeccCcHHHHHHHHHHHHcCCEEEEEECCchhCCC--c----EEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            35799999999999999999999999999999997653211  1    114567999988776655       3689999


Q ss_pred             ECCCCCCC-----CCCChhhHHHHHHHhhhhHHHHHHHHHcC--CCCCCcEEEEeeeeeeeeCCCCCccccCCCCC-CCh
Q 018503          122 NLAGTPIG-----TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPS-GND  193 (355)
Q Consensus       122 ~~a~~~~~-----~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~-~~~  193 (355)
                      |+||....     .+.+.+++...+++|+.++..+.+++...  +.+..++|++||.... .+          .+. ...
T Consensus        84 nnAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Iv~isS~~~~-~~----------~~~~~~~  152 (261)
T 4h15_A           84 HMLGGSSAAGGGFSALSDDDWYNELSLNLFAAVRLDRQLVPDMVARGSGVVVHVTSIQRV-LP----------LPESTTA  152 (261)
T ss_dssp             ECCCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGT-SC----------CTTTCHH
T ss_pred             ECCCCCccCCCCcccCCHHHHHHHHHHHhHHHHHHHHhhchhhhhcCCceEEEEEehhhc-cC----------CCCccHH
Confidence            99996321     34466788899999999988877665321  1456789999997651 11          111 234


Q ss_pred             h-HHHHHHHHHHHHhcc---CCCCeEEEEEecEEEeCCCCccc------------chHHHH-HHHhCCCCCCCCcceecc
Q 018503          194 Y-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALA------------KMIPLF-MMFAGGPLGSGQQWFSWI  256 (355)
Q Consensus       194 y-~~k~~~~~~~~~~~~---~~~~~~~i~Rp~~i~G~~~~~~~------------~~~~~~-~~~~~~~~~~~~~~~~~i  256 (355)
                      | .+|.....+.+.+..   .+|+++..|.||.+..+......            ...... ......|++      -+.
T Consensus       153 Y~asKaal~~lt~~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Plg------R~g  226 (261)
T 4h15_A          153 YAAAKAALSTYSKAMSKEVSPKGVRVVRVSPGWIETEASVRLAERLAKQAGTDLEGGKKIIMDGLGGIPLG------RPA  226 (261)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHHHHHHHHTTCCHHHHHHHHHHHTTCCTTS------SCB
T ss_pred             HHHHHHHHHHHHHHHHHHhhhhCeEEEEEeCCCcCCcchhhhhHHHHHhhccchhhHHHHHHHHhcCCCCC------CCc
Confidence            6 667655555444433   24899999999988765211000            000001 111122222      367


Q ss_pred             cHHHHHHHHHHHHhCCC---CCCceEecCCC
Q 018503          257 HLDDIVNLIYEALSNPS---YRGVINGTAPN  284 (355)
Q Consensus       257 ~v~Dva~~~~~~~~~~~---~~~~~~i~~~~  284 (355)
                      ..+|+|++++.++....   .+..+.+.+|-
T Consensus       227 ~peevA~~v~fLaS~~a~~itG~~i~VDGG~  257 (261)
T 4h15_A          227 KPEEVANLIAFLASDRAASITGAEYTIDGGT  257 (261)
T ss_dssp             CHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             CHHHHHHHHHHHhCchhcCccCcEEEECCcC
Confidence            89999999999997543   34577777664

>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}

Probab=99.68  E-value=1.4e-15  Score=142.37  Aligned_cols=220  Identities=17%  Similarity=0.171  Sum_probs=151.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCC-eEEEEecCCchhh-------ccCCCCCCccCCCeeecCCcchhhhcCC--Cc
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRSKAE-------LIFPGKKTRFFPGVMIAEEPQWRDCIQG--ST  118 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~-------~~~~~~~~~~~~~~d~~~~~~~~~~~~~--~d  118 (355)
                      ..++||||||+|+||.+++++|.++|+ .|++++|+.....       .+...........+|+.|.+++.+++++  +|
T Consensus       258 ~~~~vLITGgtGgIG~~lA~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~~~ld  337 (511)
T 2z5l_A          258 PSGTVLITGGMGAIGRRLARRLAAEGAERLVLTSRRGPEAPGAAELAEELRGHGCEVVHAACDVAERDALAALVTAYPPN  337 (511)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHTTTCEEEEEECCSSCHHHHHHHHHHSCCS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCcEEEEEecCCcccHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHhcCCCc
Confidence            457999999999999999999999999 5899999864211       1111111111345789999999988864  99


Q ss_pred             EEEECCCCCCCC---CCChhhHHHHHHHhhhhHHHHHHHHHcCCC-CCCcEEEEeeeeeeeeCCCCCccccCCCCCCChh
Q 018503          119 AVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINESPE-GVRPSVLVSATALGYYGTSETEVFDESSPSGNDY  194 (355)
Q Consensus       119 ~vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~~y  194 (355)
                      +|||+||.....   ....+.....+++|+.++.++.+++..  . +.++||++||.... +|.          +....|
T Consensus       338 ~VVh~AGv~~~~~~~~~~~~~~~~~~~~nv~g~~~L~~~~~~--~~~~~~~V~~SS~a~~-~g~----------~g~~~Y  404 (511)
T 2z5l_A          338 AVFHTAGILDDAVIDTLSPESFETVRGAKVCGAELLHQLTAD--IKGLDAFVLFSSVTGT-WGN----------AGQGAY  404 (511)
T ss_dssp             EEEECCCCCCCBCGGGCCHHHHHHHHHHHHHHHHHHHHHTSS--CTTCCCEEEEEEGGGT-TCC----------TTBHHH
T ss_pred             EEEECCcccCCcccccCCHHHHHHHHHHHHHHHHHHHHHHhh--ccCCCEEEEEeCHHhc-CCC----------CCCHHH
Confidence            999999975332   345566788899999999999998876  4 67899999997542 442          123467


Q ss_pred             -HHHHHHHHHHHHhccCCCCeEEEEEecEEEeCCCCcccchHHHHHHHhCCCCCCCCcceecccHHHHHHHHHHHHhCCC
Q 018503          195 -LAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPS  273 (355)
Q Consensus       195 -~~k~~~~~~~~~~~~~~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~  273 (355)
                       .+|...+.+...+. ..|+++++++||.+.+.+.... .....+. .         ....+++.+|+++++..++..+.
T Consensus       405 aaaKa~ld~la~~~~-~~gi~v~sv~pG~~~~tgm~~~-~~~~~~~-~---------~g~~~l~~e~~a~~l~~al~~~~  472 (511)
T 2z5l_A          405 AAANAALDALAERRR-AAGLPATSVAWGLWGGGGMAAG-AGEESLS-R---------RGLRAMDPDAAVDALLGAMGRND  472 (511)
T ss_dssp             HHHHHHHHHHHHHHH-TTTCCCEEEEECCBCSTTCCCC-HHHHHHH-H---------HTBCCBCHHHHHHHHHHHHHHTC
T ss_pred             HHHHHHHHHHHHHHH-HcCCcEEEEECCcccCCccccc-ccHHHHH-h---------cCCCCCCHHHHHHHHHHHHhCCC
Confidence             77777776666553 4599999999998743322111 0011111 1         11347899999999999998754


Q ss_pred             CCCceEecCCCccCHHHHHHHHHHH
Q 018503          274 YRGVINGTAPNPVRLAEMCDHLGNV  298 (355)
Q Consensus       274 ~~~~~~i~~~~~~s~~el~~~i~~~  298 (355)
                        ..+.+..   +.|..+...+...
T Consensus       473 --~~v~v~~---~d~~~~~~~~~~~  492 (511)
T 2z5l_A          473 --VCVTVVD---VDWERFAPATNAI  492 (511)
T ss_dssp             --SEEEECC---BCHHHHHHHHHHH
T ss_pred             --CEEEEEe---CCHHHHHhhhccc
Confidence              2333332   6677777666543

>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*

Probab=99.67  E-value=2.1e-16  Score=134.54  Aligned_cols=220  Identities=16%  Similarity=0.106  Sum_probs=146.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhcc---CCCCCCccCCCeeecCCcchhhhc-------CCCc
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELI---FPGKKTRFFPGVMIAEEPQWRDCI-------QGST  118 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~---~~~~~~~~~~~~d~~~~~~~~~~~-------~~~d  118 (355)
                      +.|+++||||++.||+++++.|+++|.+|++.+|+.+.....   ...........+|+.|++++.+++       .++|
T Consensus         6 ~gKvalVTGas~GIG~aia~~la~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~G~iD   85 (258)
T 4gkb_A            6 QDKVVIVTGGASGIGGAISMRLAEERAIPVVFARHAPDGAFLDALAQRQPRATYLPVELQDDAQCRDAVAQTIATFGRLD   85 (258)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCCHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCcccHHHHHHHHhcCCCEEEEEeecCCHHHHHHHHHHHHHHhCCCC
Confidence            457999999999999999999999999999999987653221   111111124457999988776655       3689


Q ss_pred             EEEECCCCCCC--CCCChhhHHHHHHHhhhhHHHHHHHHHcC-CCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCChh-
Q 018503          119 AVVNLAGTPIG--TRWSSEIKKEIKESRIRVTSKVVDLINES-PEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-  194 (355)
Q Consensus       119 ~vi~~a~~~~~--~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~~y-  194 (355)
                      ++||+||....  .+...+.+...+++|+.++..+.+++... ..+..++|++||.... .+          .+....| 
T Consensus        86 iLVNnAGi~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS~~~~-~~----------~~~~~~Y~  154 (258)
T 4gkb_A           86 GLVNNAGVNDGIGLDAGRDAFVASLERNLIHYYAMAHYCVPHLKATRGAIVNISSKTAV-TG----------QGNTSGYC  154 (258)
T ss_dssp             EEEECCCCCCCCCTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCTHHH-HC----------CSSCHHHH
T ss_pred             EEEECCCCCCCCCccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEeehhhc-cC----------CCCchHHH
Confidence            99999997433  23456778899999999988887766431 1233689999997651 12          1234567 


Q ss_pred             HHHHHHHHHHHHhcc---CCCCeEEEEEecEEEeCCCCcccchH----HHH-HHHhCCCCCCCCcceecccHHHHHHHHH
Q 018503          195 LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALAKMI----PLF-MMFAGGPLGSGQQWFSWIHLDDIVNLIY  266 (355)
Q Consensus       195 ~~k~~~~~~~~~~~~---~~~~~~~i~Rp~~i~G~~~~~~~~~~----~~~-~~~~~~~~~~~~~~~~~i~v~Dva~~~~  266 (355)
                      .+|.....+.+.+..   .+|+++..+.||.+..+.........    ... ......|++     ..+...+|+|++++
T Consensus       155 asKaav~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~plg-----~R~g~peeiA~~v~  229 (258)
T 4gkb_A          155 ASKGAQLALTREWAVALREHGVRVNAVIPAEVMTPLYRNWIATFEDPEAKLAEIAAKVPLG-----RRFTTPDEIADTAV  229 (258)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCSCC-----------CHHHHHHTTCTTT-----TSCBCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhcccCeEEEEEecCCCCChhHhhhhhcccChHHHHHHHHhcCCCC-----CCCcCHHHHHHHHH
Confidence            777665555544433   35899999999999776432110000    001 122222222     13678899999999


Q ss_pred             HHHhCCC---CCCceEecCCC
Q 018503          267 EALSNPS---YRGVINGTAPN  284 (355)
Q Consensus       267 ~~~~~~~---~~~~~~i~~~~  284 (355)
                      .++....   .+..+.+.+|.
T Consensus       230 fLaS~~a~~iTG~~i~VDGG~  250 (258)
T 4gkb_A          230 FLLSPRASHTTGEWLFVDGGY  250 (258)
T ss_dssp             HHHSGGGTTCCSCEEEESTTT
T ss_pred             HHhCchhcCccCCeEEECCCc
Confidence            9997544   45577777764

>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A*

Probab=99.67  E-value=2e-15  Score=132.45  Aligned_cols=218  Identities=11%  Similarity=0.015  Sum_probs=138.8

Q ss_pred             CCCEEEEEcCC--chHHHHHHHHHHhCCCeEEEEecCC-----------chhhccCC--CCC--C-ccC-----------
Q 018503           49 SQMTVSVTGAT--GFIGRRLVQRLQADNHQVRVLTRSR-----------SKAELIFP--GKK--T-RFF-----------   99 (355)
Q Consensus        49 ~~~~IlVtGat--G~iG~~l~~~L~~~g~~V~~~~r~~-----------~~~~~~~~--~~~--~-~~~-----------   99 (355)
                      .+++++||||+  |+||++++++|+++|++|++++|++           ........  ...  . ...           
T Consensus         7 ~~k~~lVTGas~~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (297)
T 1d7o_A            7 RGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLPDGSLMEIKKVYPLDAVFDNPE   86 (297)
T ss_dssp             TTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGGGBCTTSSBCCEEEEEEECTTCCSGG
T ss_pred             CCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEeeccccchhhhhhhhhhHhhhhhhhccccccccccccccceeccchh
Confidence            35789999999  9999999999999999999998642           11111100  000  0 000           


Q ss_pred             -CCeeecC--------Ccchhhhc-------CCCcEEEECCCCCC----C-CCCChhhHHHHHHHhhhhHHHHHHHHHcC
Q 018503          100 -PGVMIAE--------EPQWRDCI-------QGSTAVVNLAGTPI----G-TRWSSEIKKEIKESRIRVTSKVVDLINES  158 (355)
Q Consensus       100 -~~~d~~~--------~~~~~~~~-------~~~d~vi~~a~~~~----~-~~~~~~~~~~~~~~n~~~~~~l~~a~~~~  158 (355)
                       ...|+.|        ++++.+++       .++|++||+||...    . ...+.+.+...+++|+.++..+++++...
T Consensus        87 dv~~Dv~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~  166 (297)
T 1d7o_A           87 DVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHFLPI  166 (297)
T ss_dssp             GSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGG
T ss_pred             hhhhhhhccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHH
Confidence             1112222        45555544       36899999998531    1 33456778889999999999999998762


Q ss_pred             CCCCCcEEEEeeeeeeeeCCCCCccccCCCCCC-Chh-HHHHHHHHHHHHhccC----CCCeEEEEEecEEEeCCCCccc
Q 018503          159 PEGVRPSVLVSATALGYYGTSETEVFDESSPSG-NDY-LAEVCREWEGTALKVN----KDVRLALIRIGIVLGKDGGALA  232 (355)
Q Consensus       159 ~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~-~~y-~~k~~~~~~~~~~~~~----~~~~~~i~Rp~~i~G~~~~~~~  232 (355)
                      -...+++|++||...  +..         .+.. ..| .+|...+.+.+.+..+    .|++++.++||.+.++......
T Consensus       167 m~~~g~iv~isS~~~--~~~---------~~~~~~~Y~asKaa~~~~~~~la~e~~~~~gi~vn~v~PG~v~T~~~~~~~  235 (297)
T 1d7o_A          167 MNPGGASISLTYIAS--ERI---------IPGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKAIG  235 (297)
T ss_dssp             EEEEEEEEEEECGGG--TSC---------CTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBCCCSSCCS
T ss_pred             hccCceEEEEecccc--ccC---------CCCcchHHHHHHHHHHHHHHHHHHHhCcccCcEEEEEeccccccchhhhcc
Confidence            011268999999765  221         1222 368 7887766665554432    4899999999999987643211


Q ss_pred             chHHHH--HHHhCCCCCCCCcceecccHHHHHHHHHHHHhCCC---CCCceEecCCC
Q 018503          233 KMIPLF--MMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPS---YRGVINGTAPN  284 (355)
Q Consensus       233 ~~~~~~--~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~---~~~~~~i~~~~  284 (355)
                       ..+..  ......++      ..+...+|+|++++.++....   .+..+++.+|.
T Consensus       236 -~~~~~~~~~~~~~p~------~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdgG~  285 (297)
T 1d7o_A          236 -FIDTMIEYSYNNAPI------QKTLTADEVGNAAAFLVSPLASAITGATIYVDNGL  285 (297)
T ss_dssp             -HHHHHHHHHHHHSSS------CCCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTG
T ss_pred             -ccHHHHHHhhccCCC------CCCCCHHHHHHHHHHHhCccccCCCCCEEEECCCc
Confidence             11111  11112222      135789999999999987532   34578888774

>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A

Probab=99.67  E-value=2.1e-15  Score=129.17  Aligned_cols=218  Identities=11%  Similarity=0.003  Sum_probs=143.6

Q ss_pred             CCCEEEEEcCCc--hHHHHHHHHHHhCCCeEEEEecCCchhhccCC-----CCCCccCCCeeecCCcchhhhc-------
Q 018503           49 SQMTVSVTGATG--FIGRRLVQRLQADNHQVRVLTRSRSKAELIFP-----GKKTRFFPGVMIAEEPQWRDCI-------  114 (355)
Q Consensus        49 ~~~~IlVtGatG--~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-----~~~~~~~~~~d~~~~~~~~~~~-------  114 (355)
                      ..|+++||||+|  .||+++++.|+++|++|++.+|+.+.......     .........+|+.|++++.+++       
T Consensus         5 ~gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   84 (256)
T 4fs3_A            5 ENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLNQPEAHLYQIDVQSDEEVINGFEQIGKDV   84 (256)
T ss_dssp             TTCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHGGGTCSSCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcEEEEEccCCCHHHHHHHHHHHHHHh
Confidence            457999999987  89999999999999999999998765433211     0111123457898988776655       


Q ss_pred             CCCcEEEECCCCCCC-------CCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCCCCccccCC
Q 018503          115 QGSTAVVNLAGTPIG-------TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDES  187 (355)
Q Consensus       115 ~~~d~vi~~a~~~~~-------~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~  187 (355)
                      ..+|++||+||....       .+...+.+...+++|+.+...+..++........++|++||.... ++          
T Consensus        85 G~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~IVnisS~~~~-~~----------  153 (256)
T 4fs3_A           85 GNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMPEGGSIVATTYLGGE-FA----------  153 (256)
T ss_dssp             CCCSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCTTCEEEEEEECGGGT-SC----------
T ss_pred             CCCCEEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCEEEEEeccccc-cC----------
Confidence            368999999997422       123345556777899999888887776542345689999997651 11          


Q ss_pred             CCCCChh-HHHHHHHHHHHHhcc---CCCCeEEEEEecEEEeCCCCcccchHHHH-HHHhCCCCCCCCcceecccHHHHH
Q 018503          188 SPSGNDY-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALAKMIPLF-MMFAGGPLGSGQQWFSWIHLDDIV  262 (355)
Q Consensus       188 ~~~~~~y-~~k~~~~~~~~~~~~---~~~~~~~i~Rp~~i~G~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~v~Dva  262 (355)
                      .+....| .+|.....+.+.+..   .+|+++..|.||.+..+........-... ......|++      .+...+|+|
T Consensus       154 ~~~~~~Y~asKaal~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~Pl~------R~g~peevA  227 (256)
T 4fs3_A          154 VQNYNVMGVAKASLEANVKYLALDLGPDNIRVNAISAGPIRTLSAKGVGGFNTILKEIKERAPLK------RNVDQVEVG  227 (256)
T ss_dssp             CTTTHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTCTTHHHHHHHHHHHSTTS------SCCCHHHHH
T ss_pred             cccchhhHHHHHHHHHHHHHHHHHhCccCeEEEEEecCCCCChhhhhccCCHHHHHHHHhcCCCC------CCcCHHHHH
Confidence            2234567 777665555444333   25899999999998765432221111111 222223332      256789999


Q ss_pred             HHHHHHHhCCC---CCCceEecCC
Q 018503          263 NLIYEALSNPS---YRGVINGTAP  283 (355)
Q Consensus       263 ~~~~~~~~~~~---~~~~~~i~~~  283 (355)
                      ++++.++....   .+..+.+.+|
T Consensus       228 ~~v~fL~Sd~a~~iTG~~i~VDGG  251 (256)
T 4fs3_A          228 KTAAYLLSDLSSGVTGENIHVDSG  251 (256)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             HHHHHHhCchhcCccCCEEEECcC
Confidence            99999997543   3446777665

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*

Probab=99.67  E-value=3.7e-16  Score=138.06  Aligned_cols=204  Identities=16%  Similarity=0.112  Sum_probs=136.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecC---------CchhhccC----CCCCCccCCCeeecCCcchhhhc-
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRS---------RSKAELIF----PGKKTRFFPGVMIAEEPQWRDCI-  114 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~---------~~~~~~~~----~~~~~~~~~~~d~~~~~~~~~~~-  114 (355)
                      .+++|+||||+|+||+++++.|+++|++|++.+|.         ........    ....   ....|+.+.+++.+++ 
T Consensus         8 ~gk~~lVTGas~GIG~~~a~~La~~Ga~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~~~---~~~~D~~~~~~~~~~~~   84 (319)
T 1gz6_A            8 DGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGG---KAVANYDSVEAGEKLVK   84 (319)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTC---EEEEECCCGGGHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCcccccccCCHHHHHHHHHHHHhhCC---eEEEeCCCHHHHHHHHH
Confidence            35789999999999999999999999999997653         32222111    1110   1236888877665543 


Q ss_pred             ------CCCcEEEECCCCCCCC---CCChhhHHHHHHHhhhhHHHHHHHHHcC--CCCCCcEEEEeeeeeeeeCCCCCcc
Q 018503          115 ------QGSTAVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEV  183 (355)
Q Consensus       115 ------~~~d~vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~~~~v~~Ss~~~~~yg~~~~~~  183 (355)
                            .++|++||+||.....   ....+.++..+++|+.++..+++++...  ..+.+++|++||.... ++.     
T Consensus        85 ~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~grIV~vsS~~~~-~~~-----  158 (319)
T 1gz6_A           85 TALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGI-YGN-----  158 (319)
T ss_dssp             HHHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHHH-HCC-----
T ss_pred             HHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhc-cCC-----
Confidence                  3689999999975332   3456778889999999988888876321  0356799999996542 442     


Q ss_pred             ccCCCCCCChh-HHHHHHHHHHHHhccC---CCCeEEEEEecEEEeCCCCcccchHHHHHHHhCCCCCCCCcceecccHH
Q 018503          184 FDESSPSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLD  259 (355)
Q Consensus       184 ~~e~~~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~  259 (355)
                           +....| .+|...+.+...+..+   .|++++.++||.+ .+...   ...+             .....++..+
T Consensus       159 -----~~~~~Y~aSK~a~~~~~~~la~el~~~gI~vn~v~PG~~-t~~~~---~~~~-------------~~~~~~~~p~  216 (319)
T 1gz6_A          159 -----FGQANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAG-SRMTE---TVMP-------------EDLVEALKPE  216 (319)
T ss_dssp             -----TTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECC-STTTG---GGSC-------------HHHHHHSCGG
T ss_pred             -----CCCHHHHHHHHHHHHHHHHHHHHhcccCEEEEEEeCCCc-ccccc---ccCC-------------hhhhccCCHH
Confidence                 224567 7787766665554433   4899999999986 32111   1100             0112356889


Q ss_pred             HHHHHHHHHHhCCC--CCCceEecCC
Q 018503          260 DIVNLIYEALSNPS--YRGVINGTAP  283 (355)
Q Consensus       260 Dva~~~~~~~~~~~--~~~~~~i~~~  283 (355)
                      |+|.+++.++..+.  .+..|++.+|
T Consensus       217 dvA~~~~~l~s~~~~~tG~~~~v~GG  242 (319)
T 1gz6_A          217 YVAPLVLWLCHESCEENGGLFEVGAG  242 (319)
T ss_dssp             GTHHHHHHHTSTTCCCCSCEEEEETT
T ss_pred             HHHHHHHHHhCchhhcCCCEEEECCC
Confidence            99999999987643  3447777655

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*

Probab=99.66  E-value=1.8e-16  Score=136.34  Aligned_cols=203  Identities=12%  Similarity=0.015  Sum_probs=135.5

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHh---CCCeEEEEecCCchhhccCCC------CCCccCCCeeecCCcchhhhcC-----
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQA---DNHQVRVLTRSRSKAELIFPG------KKTRFFPGVMIAEEPQWRDCIQ-----  115 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~---~g~~V~~~~r~~~~~~~~~~~------~~~~~~~~~d~~~~~~~~~~~~-----  115 (355)
                      +++++||||+|+||++++++|++   .|++|++++|+.+........      ........+|+.|++++.++++     
T Consensus         6 ~k~~lVTGas~gIG~~ia~~l~~~~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   85 (259)
T 1oaa_A            6 CAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAVREL   85 (259)
T ss_dssp             SEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHHHHS
T ss_pred             CcEEEEeCCCChHHHHHHHHHHHhhcCCCeEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEecCCCCHHHHHHHHHHHHhc
Confidence            46899999999999999999999   899999999987654322110      0001133478888887766552     


Q ss_pred             ----CCc--EEEECCCCCCC-----CC-CChhhHHHHHHHhhhhHHHHHHHHHcC--CC--CCCcEEEEeeeeeeeeCCC
Q 018503          116 ----GST--AVVNLAGTPIG-----TR-WSSEIKKEIKESRIRVTSKVVDLINES--PE--GVRPSVLVSATALGYYGTS  179 (355)
Q Consensus       116 ----~~d--~vi~~a~~~~~-----~~-~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~--~~~~~v~~Ss~~~~~yg~~  179 (355)
                          .+|  ++||+||....     .. .+.+.+...+++|+.++..+++++...  ..  +..++|++||...  +.. 
T Consensus        86 ~~~g~~d~~~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~g~iv~isS~~~--~~~-  162 (259)
T 1oaa_A           86 PRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCA--LQP-  162 (259)
T ss_dssp             CCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGG--TSC-
T ss_pred             cccccCCccEEEECCcccCCCCcchhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCceEEEEcCchh--cCC-
Confidence                468  99999997422     11 356778899999999999999988652  12  3467999999876  321 


Q ss_pred             CCccccCCCCCCChh-HHHHHHHHHHHHhccCC-CCeEEEEEecEEEeCCCCcc------cchHHHHHHHhCCCCCCCCc
Q 018503          180 ETEVFDESSPSGNDY-LAEVCREWEGTALKVNK-DVRLALIRIGIVLGKDGGAL------AKMIPLFMMFAGGPLGSGQQ  251 (355)
Q Consensus       180 ~~~~~~e~~~~~~~y-~~k~~~~~~~~~~~~~~-~~~~~i~Rp~~i~G~~~~~~------~~~~~~~~~~~~~~~~~~~~  251 (355)
                              .+....| .+|...+.+.+.+..+. ++++..+.||.+-.+.....      ......+  ....+      
T Consensus       163 --------~~~~~~Y~asKaa~~~~~~~la~e~~~i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~--~~~~p------  226 (259)
T 1oaa_A          163 --------YKGWGLYCAGKAARDMLYQVLAAEEPSVRVLSYAPGPLDNDMQQLARETSKDPELRSKL--QKLKS------  226 (259)
T ss_dssp             --------CTTCHHHHHHHHHHHHHHHHHHHHCTTEEEEEEECCSBSSHHHHHHHHHCSCHHHHHHH--HHHHH------
T ss_pred             --------CCCccHHHHHHHHHHHHHHHHHhhCCCceEEEecCCCcCcchHHHHhhccCChhHHHHH--HHhhh------
Confidence                    2234568 78877777766655443 48888889987754321000      0000000  00001      


Q ss_pred             ceecccHHHHHHHHHHHHhC
Q 018503          252 WFSWIHLDDIVNLIYEALSN  271 (355)
Q Consensus       252 ~~~~i~v~Dva~~~~~~~~~  271 (355)
                      ...+...+|+|++++.++..
T Consensus       227 ~~~~~~p~dvA~~v~~l~~~  246 (259)
T 1oaa_A          227 DGALVDCGTSAQKLLGLLQK  246 (259)
T ss_dssp             TTCSBCHHHHHHHHHHHHHH
T ss_pred             cCCcCCHHHHHHHHHHHHhh
Confidence            12368999999999999974

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A

Probab=99.66  E-value=1.5e-15  Score=140.22  Aligned_cols=217  Identities=14%  Similarity=0.053  Sum_probs=143.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhh--ccCCCCCCccCCCeeecCCcchhhhcC-------C-Cc
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAE--LIFPGKKTRFFPGVMIAEEPQWRDCIQ-------G-ST  118 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~--~~~~~~~~~~~~~~d~~~~~~~~~~~~-------~-~d  118 (355)
                      ..++++||||+|.||.+++++|.++|++|++++|+.....  ....... .....+|+.|.+++.++++       + +|
T Consensus       212 ~gk~~LVTGgsgGIG~aiA~~La~~Ga~Vvl~~r~~~~~~l~~~~~~~~-~~~~~~Dvtd~~~v~~~~~~~~~~~g~~id  290 (454)
T 3u0b_A          212 DGKVAVVTGAARGIGATIAEVFARDGATVVAIDVDGAAEDLKRVADKVG-GTALTLDVTADDAVDKITAHVTEHHGGKVD  290 (454)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHHT-CEEEECCTTSTTHHHHHHHHHHHHSTTCCS
T ss_pred             CCCEEEEeCCchHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHcC-CeEEEEecCCHHHHHHHHHHHHHHcCCCce
Confidence            4579999999999999999999999999999998753221  1100000 0134579999988877663       3 99


Q ss_pred             EEEECCCCCCC---CCCChhhHHHHHHHhhhhHHHHHHHHHcC--CCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCCh
Q 018503          119 AVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGND  193 (355)
Q Consensus       119 ~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~~  193 (355)
                      +|||+||....   ...+.+.+...+++|+.++.++.+++...  ..+..+||++||.... ++.          +....
T Consensus       291 ~lV~nAGv~~~~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~g~iV~iSS~a~~-~g~----------~g~~~  359 (454)
T 3u0b_A          291 ILVNNAGITRDKLLANMDEKRWDAVIAVNLLAPQRLTEGLVGNGTIGEGGRVIGLSSMAGI-AGN----------RGQTN  359 (454)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHTTSSCTTCEEEEECCHHHH-HCC----------TTCHH
T ss_pred             EEEECCcccCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEEeChHhC-CCC----------CCCHH
Confidence            99999998543   23466778899999999999999988762  1256789999997652 231          22456


Q ss_pred             h-HHHHHHHHHHHHhcc---CCCCeEEEEEecEEEeCCCCcccchHHHHHHHhCCCCCCCCcceecccHHHHHHHHHHHH
Q 018503          194 Y-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEAL  269 (355)
Q Consensus       194 y-~~k~~~~~~~~~~~~---~~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~  269 (355)
                      | .+|...+.+...+..   ..|++++.+.||.+..+........... ......+      ...+...+|+|++++.++
T Consensus       360 YaasKaal~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~-~~~~~~~------l~r~g~pedvA~~v~fL~  432 (454)
T 3u0b_A          360 YATTKAGMIGLAEALAPVLADKGITINAVAPGFIETKMTEAIPLATRE-VGRRLNS------LFQGGQPVDVAELIAYFA  432 (454)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECSBCC----------CH-HHHHSBT------TSSCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhhcCcEEEEEEcCcccChhhhhcchhhHH-HHHhhcc------ccCCCCHHHHHHHHHHHh
Confidence            7 777755544444332   3589999999999987643221110000 0011111      123467899999999998


Q ss_pred             hCCC---CCCceEecCCC
Q 018503          270 SNPS---YRGVINGTAPN  284 (355)
Q Consensus       270 ~~~~---~~~~~~i~~~~  284 (355)
                      ....   .+..+++.++.
T Consensus       433 s~~a~~itG~~i~vdGG~  450 (454)
T 3u0b_A          433 SPASNAVTGNTIRVCGQA  450 (454)
T ss_dssp             CGGGTTCCSCEEEESSSB
T ss_pred             CCccCCCCCcEEEECCcc
Confidence            7543   44577777664

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}

Probab=99.65  E-value=5.2e-16  Score=133.45  Aligned_cols=210  Identities=14%  Similarity=0.020  Sum_probs=132.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCC----CCCccCCCeeecCCcchhhhc--------CC
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG----KKTRFFPGVMIAEEPQWRDCI--------QG  116 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~----~~~~~~~~~d~~~~~~~~~~~--------~~  116 (355)
                      ++++++||||+|+||+++++.|+++|++|++++|+.+........    ........+|+.|++++.+++        ..
T Consensus         4 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~g~   83 (260)
T 2qq5_A            4 NGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLGGQCVPVVCDSSQESEVRSLFEQVDREQQGR   83 (260)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSSEEEEEECCTTSHHHHHHHHHHHHHHHTTC
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCceEEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence            357899999999999999999999999999999987654322110    000113457888888776554        35


Q ss_pred             CcEEEECCCC--C-------C-CCCCChhhHHHHHHHhhhhHHHHHHHHHcC--CCCCCcEEEEeeeeeeeeCCCCCccc
Q 018503          117 STAVVNLAGT--P-------I-GTRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVF  184 (355)
Q Consensus       117 ~d~vi~~a~~--~-------~-~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~~~~v~~Ss~~~~~yg~~~~~~~  184 (355)
                      +|++||+||.  .       . ......+.+...+++|+.++..+.+++...  ..+.+++|++||...  +..      
T Consensus        84 id~lvnnAg~g~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~--~~~------  155 (260)
T 2qq5_A           84 LDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGLRGHYFCSVYGARLMVPAGQGLIVVISSPGS--LQY------  155 (260)
T ss_dssp             CCEEEECCCTTHHHHHHTTTCCTTTSCTTHHHHHHTTTTHHHHHHHHHHHHHHGGGTCCEEEEECCGGG--TSC------
T ss_pred             ceEEEECCccccccccccCCCccccCCHHHHHHHHhhcchhHHHHHHHHHHHHhhcCCcEEEEEcChhh--cCC------
Confidence            7999999952  1       1 123345667888999999987776655321  145679999999765  321      


Q ss_pred             cCCCCCCChh-HHHHHHHHHHHHhcc---CCCCeEEEEEecEEEeCCCCcccchHHHHHHHhCCCCC-CCCcceecccHH
Q 018503          185 DESSPSGNDY-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLG-SGQQWFSWIHLD  259 (355)
Q Consensus       185 ~e~~~~~~~y-~~k~~~~~~~~~~~~---~~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~v~  259 (355)
                          .+...| .+|...+.+...+..   ..|+++++++||.+..+.....   ............. .......+...+
T Consensus       156 ----~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~pe  228 (260)
T 2qq5_A          156 ----MFNVPYGVGKAACDKLAADCAHELRRHGVSCVSLWPGIVQTELLKEH---MAKEEVLQDPVLKQFKSAFSSAETTE  228 (260)
T ss_dssp             ----CSSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCCSCTTTC-------------------------CHHHHHH
T ss_pred             ----CCCCchHHHHHHHHHHHHHHHHHhccCCeEEEEEecCccccHHHHHh---hccccccchhHHHHHHhhhccCCCHH
Confidence                123467 778777666555443   3589999999999987642211   0000000000000 000011246789


Q ss_pred             HHHHHHHHHHhCCC
Q 018503          260 DIVNLIYEALSNPS  273 (355)
Q Consensus       260 Dva~~~~~~~~~~~  273 (355)
                      |+|++++.++..+.
T Consensus       229 ~va~~v~~l~s~~~  242 (260)
T 2qq5_A          229 LSGKCVVALATDPN  242 (260)
T ss_dssp             HHHHHHHHHHTCTT
T ss_pred             HHHHHHHHHhcCcc
Confidence            99999999998653

>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*

Probab=99.58  E-value=2.1e-14  Score=133.45  Aligned_cols=200  Identities=16%  Similarity=0.125  Sum_probs=140.4

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCC-eEEEEecCCchhh---c----cCCCCCCccCCCeeecCCcchhhhcC------
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRSKAE---L----IFPGKKTRFFPGVMIAEEPQWRDCIQ------  115 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~---~----~~~~~~~~~~~~~d~~~~~~~~~~~~------  115 (355)
                      ++++|||||+|.||.+++++|.++|+ .|+.++|+.....   .    +...........+|+.|.+++.++++      
T Consensus       239 ~~~vLITGgsgGIG~alA~~La~~Ga~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~g  318 (496)
T 3mje_A          239 HGSVLVTGGTGGIGGRVARRLAEQGAAHLVLTSRRGADAPGAAELRAELEQLGVRVTIAACDAADREALAALLAELPEDA  318 (496)
T ss_dssp             CSEEEEETCSSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTCCTTS
T ss_pred             CCEEEEECCCCchHHHHHHHHHHCCCcEEEEEeCCCCChHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHhC
Confidence            47899999999999999999999998 7888888743221   1    11111111244578999998887774      


Q ss_pred             CCcEEEECCCCC-CC---CCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCCCCccccCCCCCC
Q 018503          116 GSTAVVNLAGTP-IG---TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSG  191 (355)
Q Consensus       116 ~~d~vi~~a~~~-~~---~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~  191 (355)
                      .+|+|||+||.. ..   .....+.....+++|+.++.++.+++..  ....+||++||.... +|.          +..
T Consensus       319 ~ld~vVh~AGv~~~~~~l~~~t~e~~~~vl~~nv~g~~~L~~~~~~--~~~~~iV~~SS~a~~-~g~----------~g~  385 (496)
T 3mje_A          319 PLTAVFHSAGVAHDDAPVADLTLGQLDALMRAKLTAARHLHELTAD--LDLDAFVLFSSGAAV-WGS----------GGQ  385 (496)
T ss_dssp             CEEEEEECCCCCCSCCCTTTCCHHHHHHHHHTTHHHHHHHHHHHTT--SCCSEEEEEEEHHHH-TTC----------TTC
T ss_pred             CCeEEEECCcccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHhhc--cCCCEEEEEeChHhc-CCC----------CCc
Confidence            479999999975 22   3445677788999999999999999988  677899999997652 332          223


Q ss_pred             Chh-HHHHHHHHHHHHhccCCCCeEEEEEecEEEeCCCCcccchHHHHHHHhCCCCCCCCcceecccHHHHHHHHHHHHh
Q 018503          192 NDY-LAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALS  270 (355)
Q Consensus       192 ~~y-~~k~~~~~~~~~~~~~~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~  270 (355)
                      ..| .+|...+.+...+. ..|++++.|.||.+.+.+..........+  ..        .....+..++.++++..++.
T Consensus       386 ~~YaAaKa~ldala~~~~-~~Gi~v~sV~pG~w~~~gm~~~~~~~~~l--~~--------~g~~~l~pe~~~~~l~~~l~  454 (496)
T 3mje_A          386 PGYAAANAYLDALAEHRR-SLGLTASSVAWGTWGEVGMATDPEVHDRL--VR--------QGVLAMEPEHALGALDQMLE  454 (496)
T ss_dssp             HHHHHHHHHHHHHHHHHH-HTTCCCEEEEECEESSSCC------CHHH--HH--------TTEEEECHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHH-hcCCeEEEEECCcccCCccccChHHHHHH--Hh--------cCCCCCCHHHHHHHHHHHHc
Confidence            467 77777766666544 35999999999998766532211111111  11        11345788999999999998


Q ss_pred             CCC
Q 018503          271 NPS  273 (355)
Q Consensus       271 ~~~  273 (355)
                      .+.
T Consensus       455 ~~~  457 (496)
T 3mje_A          455 NDD  457 (496)
T ss_dssp             HTC
T ss_pred             CCC
Confidence            654

>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A*

Probab=99.55  E-value=6.6e-14  Score=123.72  Aligned_cols=219  Identities=14%  Similarity=0.046  Sum_probs=134.9

Q ss_pred             CCCEEEEEcC--CchHHHHHHHHHHhCCCeEEEEecCCc-----------hh---hccCCCC----CCcc----------
Q 018503           49 SQMTVSVTGA--TGFIGRRLVQRLQADNHQVRVLTRSRS-----------KA---ELIFPGK----KTRF----------   98 (355)
Q Consensus        49 ~~~~IlVtGa--tG~iG~~l~~~L~~~g~~V~~~~r~~~-----------~~---~~~~~~~----~~~~----------   98 (355)
                      .+++++||||  +|.||++++++|+++|++|++++|++.           ..   ..+....    ....          
T Consensus         8 ~gk~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~   87 (315)
T 2o2s_A            8 RGQTAFVAGVADSHGYGWAIAKHLASAGARVALGTWPPVLGLFQKSLQSGRLDEDRKLPDGSLIEFAGVYPLDAAFDKPE   87 (315)
T ss_dssp             TTCEEEEECCSSSSSHHHHHHHHHHTTTCEEEEEECHHHHHHHHHHHHHTTTHHHHBCTTSCBCCCSCEEECCTTCSSTT
T ss_pred             CCCEEEEeCCCCCCChHHHHHHHHHHCCCEEEEEecccccchhhhhhhhhhhhhhhhhhccccccccccccccccccccc
Confidence            3478999999  899999999999999999999987531           10   1110000    0000          


Q ss_pred             CCCeeecC--------Ccchhhhc-------CCCcEEEECCCCCC---C--CCCChhhHHHHHHHhhhhHHHHHHHHHcC
Q 018503           99 FPGVMIAE--------EPQWRDCI-------QGSTAVVNLAGTPI---G--TRWSSEIKKEIKESRIRVTSKVVDLINES  158 (355)
Q Consensus        99 ~~~~d~~~--------~~~~~~~~-------~~~d~vi~~a~~~~---~--~~~~~~~~~~~~~~n~~~~~~l~~a~~~~  158 (355)
                      ...+|+.|        .+++.+++       .++|++|||||...   .  .....+.+...+++|+.++..+++++...
T Consensus        88 ~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~  167 (315)
T 2o2s_A           88 DVPQDIKDNKRYAGVDGYTIKEVAVKVKQDLGNIDILVHSLANGPEVTKPLLETSRKGYLAASSNSAYSFVSLLQHFGPI  167 (315)
T ss_dssp             SSCHHHHTCGGGSSCCCCSHHHHHHHHHHHHCSEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHSTT
T ss_pred             hhhhhhhcccccccCCHHHHHHHHHHHHHhcCCCCEEEECCccCCcCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHH
Confidence            01223333        45555544       36899999999632   1  23456778899999999999999998762


Q ss_pred             CCCCCcEEEEeeeeeeeeCCCCCccccCCCCCC-Chh-HHHHHHHHHHHHhccC----CCCeEEEEEecEEEeCCCCcc-
Q 018503          159 PEGVRPSVLVSATALGYYGTSETEVFDESSPSG-NDY-LAEVCREWEGTALKVN----KDVRLALIRIGIVLGKDGGAL-  231 (355)
Q Consensus       159 ~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~-~~y-~~k~~~~~~~~~~~~~----~~~~~~i~Rp~~i~G~~~~~~-  231 (355)
                      -...+++|++||...  +..         .+.. ..| .+|...+.+.+.+..+    .|+++..++||.+..+..... 
T Consensus       168 m~~~g~Iv~isS~~~--~~~---------~~~~~~~Y~asKaal~~l~~~la~el~~~~gIrvn~v~PG~v~T~~~~~~~  236 (315)
T 2o2s_A          168 MNEGGSAVTLSYLAA--ERV---------VPGYGGGMSSAKAALESDTRTLAWEAGQKYGVRVNAISAGPLKSRAASAIG  236 (315)
T ss_dssp             EEEEEEEEEEEEGGG--TSC---------CTTCCTTHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEECCCCCHHHHHTT
T ss_pred             HhcCCEEEEEecccc--ccc---------CCCccHHHHHHHHHHHHHHHHHHHHhCcccCeEEEEEecccccchhhhhcc
Confidence            011268999999765  221         1122 358 7787666555443332    589999999999865421000 


Q ss_pred             ----cchHHHH-H-HHhCCCCCCCCcceecccHHHHHHHHHHHHhCCC---CCCceEecCCC
Q 018503          232 ----AKMIPLF-M-MFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPS---YRGVINGTAPN  284 (355)
Q Consensus       232 ----~~~~~~~-~-~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~---~~~~~~i~~~~  284 (355)
                          ..+.... . .....++      ..+...+|+|++++.++....   .+..+.+.+|.
T Consensus       237 ~~~~~~~~~~~~~~~~~~~p~------~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~  292 (315)
T 2o2s_A          237 KSGEKSFIDYAIDYSYNNAPL------RRDLHSDDVGGAALFLLSPLARAVSGVTLYVDNGL  292 (315)
T ss_dssp             CSSSSCHHHHHHHHHHHHSSS------CCCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTG
T ss_pred             ccccchhHHHHHHHHhccCCC------CCCCCHHHHHHHHHHHhCchhccCcCCEEEECCCe
Confidence                0111111 0 0111122      125789999999999997532   34466676664

>2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella}

Probab=99.53  E-value=4.3e-14  Score=125.14  Aligned_cols=224  Identities=14%  Similarity=0.002  Sum_probs=121.0

Q ss_pred             CCCEEEEEcC--CchHHHHHHHHHHhCCCeEEEEecCC-----------chhhcc-----------CCCC---------C
Q 018503           49 SQMTVSVTGA--TGFIGRRLVQRLQADNHQVRVLTRSR-----------SKAELI-----------FPGK---------K   95 (355)
Q Consensus        49 ~~~~IlVtGa--tG~iG~~l~~~L~~~g~~V~~~~r~~-----------~~~~~~-----------~~~~---------~   95 (355)
                      ..++++||||  +|.||+++++.|+++|++|++++|++           +.....           ....         .
T Consensus         8 ~~k~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (319)
T 2ptg_A            8 RGKTAFVAGVADSNGYGWAICKLLRAAGARVLVGTWPPVYSIFKKGLESSRFEQDSFYAQEPSSKVAAEAAEKPVDLVFD   87 (319)
T ss_dssp             TTCEEEEECCCCTTSHHHHHHHHHHHTTCEEEEEECHHHHHHHHC--------------------------------CCS
T ss_pred             CCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEEEeccccccchhhhhhhhhhhhhhhhhcchhhhHHHHhhhcccccccc
Confidence            3468999999  89999999999999999999998742           111100           0000         0


Q ss_pred             CccC----------CCeeecC--------Ccchhhhc-------CCCcEEEECCCCCC---C--CCCChhhHHHHHHHhh
Q 018503           96 TRFF----------PGVMIAE--------EPQWRDCI-------QGSTAVVNLAGTPI---G--TRWSSEIKKEIKESRI  145 (355)
Q Consensus        96 ~~~~----------~~~d~~~--------~~~~~~~~-------~~~d~vi~~a~~~~---~--~~~~~~~~~~~~~~n~  145 (355)
                      ....          ..+|+.|        .+++.+++       .++|++|||||...   .  .....+.+...+++|+
T Consensus        88 ~~~~~d~~~~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~vN~  167 (319)
T 2ptg_A           88 KIYPLDAVFDTPQDVPPEVSSNKRYAGVGGFTISEVAEAVRADVGQIDILVHSLANGPEVTKPLLQTSRKGYLAAVSSSS  167 (319)
T ss_dssp             EEEECCTTCCSGGGSCHHHHCC--CTTSCCCSHHHHHHHHHHHHSCEEEEEEEEECCSSSSSCGGGCCHHHHHHHHHHHT
T ss_pred             ccccccccccccccccchhcccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCCCCCCccccCCHHHHHHHHhHhh
Confidence            0000          1122333        34555444       36899999998531   1  2345677788999999


Q ss_pred             hhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCCCCccccCCCCCC-Chh-HHHHHHHHHHHHhccC----CCCeEEEEE
Q 018503          146 RVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSG-NDY-LAEVCREWEGTALKVN----KDVRLALIR  219 (355)
Q Consensus       146 ~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~-~~y-~~k~~~~~~~~~~~~~----~~~~~~i~R  219 (355)
                      .++..+++++...-....++|++||...  +...         +.. ..| .+|...+.+.+.+..+    .|+++..++
T Consensus       168 ~g~~~l~~~~~~~m~~~g~Iv~isS~~~--~~~~---------~~~~~~Y~asKaal~~l~~~la~el~~~~gIrvn~v~  236 (319)
T 2ptg_A          168 YSFVSLLQHFLPLMKEGGSALALSYIAS--EKVI---------PGYGGGMSSAKAALESDCRTLAFEAGRARAVRVNCIS  236 (319)
T ss_dssp             HHHHHHHHHHGGGEEEEEEEEEEEECC-----------------------------THHHHHHHHHHHHHHHCCEEEEEE
T ss_pred             HHHHHHHHHHHHHHhcCceEEEEecccc--cccc---------CccchhhHHHHHHHHHHHHHHHHHhccccCeeEEEEe
Confidence            9999999988762011268999999765  2211         111 246 5665444444333222    489999999


Q ss_pred             ecEEEeCCCCcccch-HHHH-HHHhCCCCCCCCcceecccHHHHHHHHHHHHhCCC---CCCceEecCCC
Q 018503          220 IGIVLGKDGGALAKM-IPLF-MMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPS---YRGVINGTAPN  284 (355)
Q Consensus       220 p~~i~G~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~---~~~~~~i~~~~  284 (355)
                      ||.+..+........ ...+ .... ..+........+...+|+|++++.++....   .+..+.+.+|.
T Consensus       237 PG~v~T~~~~~~~~~~~~~~~~~~~-~~~~~~~p~~r~~~peevA~~v~~L~s~~~~~itG~~i~vdGG~  305 (319)
T 2ptg_A          237 AGPLKSRAASAIGKAGDKTFIDLAI-DYSEANAPLQKELESDDVGRAALFLLSPLARAVTGATLYVDNGL  305 (319)
T ss_dssp             ECCCC--------------------------------CCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTC
T ss_pred             eCCccChhhhhcccccchhhHHHHH-HHHhccCCCCCCCCHHHHHHHHHHHhCcccCCccCCEEEECCCc
Confidence            999876642211000 0000 0000 000000111236789999999999997532   34477777764

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster}

Probab=99.53  E-value=2.9e-14  Score=136.72  Aligned_cols=221  Identities=16%  Similarity=0.113  Sum_probs=141.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEec---------CCchhhccC----CCCCCccCCCeeecCCcchhhhcC
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTR---------SRSKAELIF----PGKKTRFFPGVMIAEEPQWRDCIQ  115 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r---------~~~~~~~~~----~~~~~~~~~~~d~~~~~~~~~~~~  115 (355)
                      .+++++||||+|.||+++++.|+++|++|++++|         +........    ....   ...+|+.|.+++.++++
T Consensus        18 ~gk~~lVTGas~GIG~aiA~~La~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~~~~---~~~~D~~d~~~~~~~~~   94 (613)
T 3oml_A           18 DGRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKAGG---EAVADYNSVIDGAKVIE   94 (613)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEC--------------CHHHHHHHHHHTTC---CEEECCCCGGGHHHHHC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcccccccCCHHHHHHHHHHHHHhCC---eEEEEeCCHHHHHHHHH
Confidence            4578999999999999999999999999999988         332222111    1111   12357777777766664


Q ss_pred             -------CCcEEEECCCCCCC---CCCChhhHHHHHHHhhhhHHHHHHHH----HcCCCCCCcEEEEeeeeeeeeCCCCC
Q 018503          116 -------GSTAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLI----NESPEGVRPSVLVSATALGYYGTSET  181 (355)
Q Consensus       116 -------~~d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~----~~~~~~~~~~v~~Ss~~~~~yg~~~~  181 (355)
                             .+|++|||||....   ...+.+.+...+++|+.++.++++++    ++  .+..++|++||.... ++.   
T Consensus        95 ~~~~~~g~iDiLVnnAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~l~~~~~p~m~~--~~~g~IV~isS~a~~-~~~---  168 (613)
T 3oml_A           95 TAIKAFGRVDILVNNAGILRDRSLVKTSEQDWNLVNDVHLKGSFKCTQAAFPYMKK--QNYGRIIMTSSNSGI-YGN---  168 (613)
T ss_dssp             ----------CEECCCCCCCCCCSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHT--TTCEEEEEECCHHHH-HCC---
T ss_pred             HHHHHCCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH--cCCCEEEEECCHHHc-CCC---
Confidence                   57999999997533   24466778899999999999998887    44  456799999997652 332   


Q ss_pred             ccccCCCCCCChh-HHHHHHHHHHHHhcc---CCCCeEEEEEecEEEeCCCCcccchHHHHHHHhCCCCCCCCcceeccc
Q 018503          182 EVFDESSPSGNDY-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIH  257 (355)
Q Consensus       182 ~~~~e~~~~~~~y-~~k~~~~~~~~~~~~---~~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  257 (355)
                             +....| .+|...+.+...+..   ..|+.+..+.|+.+-.......                 .......+.
T Consensus       169 -------~~~~~Y~asKaal~~lt~~la~e~~~~gI~vn~v~Pg~~t~~~~~~~-----------------~~~~~~~~~  224 (613)
T 3oml_A          169 -------FGQVNYTAAKMGLIGLANTVAIEGARNNVLCNVIVPTAASRMTEGIL-----------------PDILFNELK  224 (613)
T ss_dssp             -------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC------CCCC-----------------CHHHHTTCC
T ss_pred             -------CCChHHHHHHHHHHHHHHHHHHHhCccCeEEEEEECCCCChhhhhcc-----------------chhhhhcCC
Confidence                   234467 777766655554443   2489999999986421111110                 011123457


Q ss_pred             HHHHHHHHHHHHhCCC--CCCceEecCC--------------------CccCHHHHHHHHHHHhCCC
Q 018503          258 LDDIVNLIYEALSNPS--YRGVINGTAP--------------------NPVRLAEMCDHLGNVLGRP  302 (355)
Q Consensus       258 v~Dva~~~~~~~~~~~--~~~~~~i~~~--------------------~~~s~~el~~~i~~~~g~~  302 (355)
                      .+|+|.+++.++....  .+..+++.+|                    ...+..++.+.+.+.....
T Consensus       225 pedvA~~v~~L~s~~~~~tG~~i~vdGG~~~~~~~~~~~g~~~~~~~~~~~~~e~~~~~w~~i~~~~  291 (613)
T 3oml_A          225 PKLIAPVVAYLCHESCEDNGSYIESAAGWATKLHMVRGKGAVLRPSLDDPVTIEYVKDVWSNVTDMS  291 (613)
T ss_dssp             GGGTHHHHHHTTSTTCCCCSCEEEEETTEEEEECCCBCCCCCSSSSTTSCCCHHHHHHTHHHHTCCT
T ss_pred             HHHHHHHHHHhcCCCcCCCceEEEECCCeEEEEEEEecCCEEecCccccCCCHHHHHHHHHHhhccc
Confidence            8999999999987643  2335655443                    1246677777777777654

>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}

Probab=99.52  E-value=1e-13  Score=130.27  Aligned_cols=222  Identities=13%  Similarity=0.044  Sum_probs=144.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCe-EEEE-ecCCch-------------hhc----cCCCCCCccCCCeeecCCcc
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQ-VRVL-TRSRSK-------------AEL----IFPGKKTRFFPGVMIAEEPQ  109 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~-V~~~-~r~~~~-------------~~~----~~~~~~~~~~~~~d~~~~~~  109 (355)
                      ..+++|||||+|.||.+++++|.++|++ |+.+ +|+...             ...    +........+..+|+.|.++
T Consensus       250 ~~~~vLITGgsgGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~  329 (525)
T 3qp9_A          250 ADGTVLVTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADLGATATVVTCDLTDAEA  329 (525)
T ss_dssp             TTSEEEESSTTSHHHHHHHHHHHHHTCCEEEEEECCCC---------------CHHHHHHHHHHTCEEEEEECCTTSHHH
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHHhcCCEEEEEECCCCCHHH
Confidence            4579999999999999999999999987 5555 787422             111    10001111244578999998


Q ss_pred             hhhhcC------CCcEEEECCCCCCC---CCCChhhHHHHHHHhhhhHHHHHHHHHcCC--CC-CCcEEEEeeeeeeeeC
Q 018503          110 WRDCIQ------GSTAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINESP--EG-VRPSVLVSATALGYYG  177 (355)
Q Consensus       110 ~~~~~~------~~d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~--~~-~~~~v~~Ss~~~~~yg  177 (355)
                      +.++++      .+|+|||+||....   ...+.+.....+++|+.++.++.+++....  .+ ..+||++||.... +|
T Consensus       330 v~~~~~~i~~~g~id~vVh~AGv~~~~~~~~~~~~~~~~v~~~nv~g~~~L~~~~~~~~~~~~~~~~iV~~SS~a~~-~g  408 (525)
T 3qp9_A          330 AARLLAGVSDAHPLSAVLHLPPTVDSEPLAATDADALARVVTAKATAALHLDRLLREAAAAGGRPPVLVLFSSVAAI-WG  408 (525)
T ss_dssp             HHHHHHTSCTTSCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHTC----CCCEEEEEEEGGGT-TC
T ss_pred             HHHHHHHHHhcCCCcEEEECCcCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHhccccccCCCCCEEEEECCHHHc-CC
Confidence            887775      36999999997543   234567778899999999999999987731  11 6789999997762 33


Q ss_pred             CCCCccccCCCCCCChh-HHHHHHHHHHHHhccCCCCeEEEEEecEEEeCCCCcccchHHHHHHHhCCCCCCCCcceecc
Q 018503          178 TSETEVFDESSPSGNDY-LAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWI  256 (355)
Q Consensus       178 ~~~~~~~~e~~~~~~~y-~~k~~~~~~~~~~~~~~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  256 (355)
                      .          +....| .+|...+.+...+. ..|++++.|.||.+ +.+..........+.  .        .....+
T Consensus       409 ~----------~g~~~YaaaKa~l~~lA~~~~-~~gi~v~sI~pG~~-~tgm~~~~~~~~~~~--~--------~g~~~l  466 (525)
T 3qp9_A          409 G----------AGQGAYAAGTAFLDALAGQHR-ADGPTVTSVAWSPW-EGSRVTEGATGERLR--R--------LGLRPL  466 (525)
T ss_dssp             C----------TTCHHHHHHHHHHHHHHTSCC-SSCCEEEEEEECCB-TTSGGGSSHHHHHHH--H--------TTBCCB
T ss_pred             C----------CCCHHHHHHHHHHHHHHHHHH-hCCCCEEEEECCcc-ccccccchhhHHHHH--h--------cCCCCC
Confidence            1          223467 77776666654433 45999999999988 322111111111111  1        012458


Q ss_pred             cHHHHHHHHHHHHhCCCCCCceEecCCCccCHHHHHHHHHHH
Q 018503          257 HLDDIVNLIYEALSNPSYRGVINGTAPNPVRLAEMCDHLGNV  298 (355)
Q Consensus       257 ~v~Dva~~~~~~~~~~~~~~~~~i~~~~~~s~~el~~~i~~~  298 (355)
                      ..+++++++..++..+.  ....+.   .+.|..+...+...
T Consensus       467 ~pee~a~~l~~~l~~~~--~~v~v~---~~dw~~~~~~~~~~  503 (525)
T 3qp9_A          467 APATALTALDTALGHGD--TAVTIA---DVDWSSFAPGFTTA  503 (525)
T ss_dssp             CHHHHHHHHHHHHHHTC--SEEEEC---CBCHHHHHHHHHSS
T ss_pred             CHHHHHHHHHHHHhCCC--CeEEEE---eCCHHHHHhhcccc
Confidence            89999999999998754  222232   26677666655443

>3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ...

Probab=99.47  E-value=5.4e-13  Score=118.51  Aligned_cols=165  Identities=10%  Similarity=0.000  Sum_probs=107.8

Q ss_pred             CCEEEEEcCCc--hHHHHHHHHHHhCCCeEEEEecCC---------chhh---ccCCC-CCC---ccCCCeeecCC--c-
Q 018503           50 QMTVSVTGATG--FIGRRLVQRLQADNHQVRVLTRSR---------SKAE---LIFPG-KKT---RFFPGVMIAEE--P-  108 (355)
Q Consensus        50 ~~~IlVtGatG--~iG~~l~~~L~~~g~~V~~~~r~~---------~~~~---~~~~~-~~~---~~~~~~d~~~~--~-  108 (355)
                      .++++||||++  .||.+++++|+++|++|++.+|++         +...   ..... ...   .....+|+.+.  + 
T Consensus         2 ~k~~lITGas~~~GIG~aiA~~la~~G~~Vv~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~   81 (329)
T 3lt0_A            2 EDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTAND   81 (329)
T ss_dssp             CCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECHHHHHHHHHHHHTTTTTGGGBCSSSCBCCEEEEEECCTTCSSGGG
T ss_pred             CcEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecCccccccccchHHHHHHHHHHHhhcccccccccccccccccchhh
Confidence            36899999875  999999999999999999877654         1111   00000 000   00112233333  3 


Q ss_pred             -----------------chhhhc-------CCCcEEEECCCCCC-----CCCCChhhHHHHHHHhhhhHHHHHHHHHcC-
Q 018503          109 -----------------QWRDCI-------QGSTAVVNLAGTPI-----GTRWSSEIKKEIKESRIRVTSKVVDLINES-  158 (355)
Q Consensus       109 -----------------~~~~~~-------~~~d~vi~~a~~~~-----~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-  158 (355)
                                       ++.+++       ..+|++||+||...     ......+.+...+++|+.++..+.+++... 
T Consensus        82 ~~~~~~~~~~~Dlsd~~~v~~~~~~~~~~~g~iDilVnnAGi~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m  161 (329)
T 3lt0_A           82 IDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNIM  161 (329)
T ss_dssp             CCHHHHTSHHHHTCCSCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGE
T ss_pred             hhhhhcccccccccCHHHHHHHHHHHHHhcCCCcEEEECCcccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence                             666555       36899999999631     133456778899999999999999988662 


Q ss_pred             CCCCCcEEEEeeeeeeeeCCCCCccccCCCCCC-Chh-HHHHHHHHHHHHhccC----CCCeEEEEEecEEEeC
Q 018503          159 PEGVRPSVLVSATALGYYGTSETEVFDESSPSG-NDY-LAEVCREWEGTALKVN----KDVRLALIRIGIVLGK  226 (355)
Q Consensus       159 ~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~-~~y-~~k~~~~~~~~~~~~~----~~~~~~i~Rp~~i~G~  226 (355)
                      ..+ .++|++||...  +..         .+.. ..| .+|.....+.+.+..+    .|+++..+.||.+..+
T Consensus       162 ~~~-g~Iv~isS~~~--~~~---------~~~~~~~Y~asKaal~~~~~~la~el~~~~gI~vn~v~PG~v~T~  223 (329)
T 3lt0_A          162 KPQ-SSIISLTYHAS--QKV---------VPGYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSR  223 (329)
T ss_dssp             EEE-EEEEEEECGGG--TSC---------CTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCH
T ss_pred             hhC-CeEEEEeCccc--cCC---------CCcchHHHHHHHHHHHHHHHHHHHHhCCccCeEEEEEecceeech
Confidence            122 68999999765  211         1223 368 7786665555443332    4899999999988654

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=99.29  E-value=3.6e-11  Score=114.87  Aligned_cols=226  Identities=12%  Similarity=0.073  Sum_probs=139.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCch-h-hccCCCCCCccCCCeee-cCCcch-h---hhcCCCcEEE
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSK-A-ELIFPGKKTRFFPGVMI-AEEPQW-R---DCIQGSTAVV  121 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~-~-~~~~~~~~~~~~~~~d~-~~~~~~-~---~~~~~~d~vi  121 (355)
                      +.+.++||||++.||+++++.|+++|++|++.+|.... . ..+...........+|+ .+.+.+ +   +.+..+|++|
T Consensus       321 ~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~~~~~~~~~~~~~~~G~iDiLV  400 (604)
T 2et6_A          321 KDKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFKDATKTVDEIKAAGGEAWPDQHDVAKDSEAIIKNVIDKYGTIDILV  400 (604)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHHHHTTCEEEEECCCHHHHHHHHHHHHHHHHSCCCEEE
T ss_pred             CCCeEEEECcchHHHHHHHHHHHHCCCEEEEEeCccHHHHHHHHHhcCCeEEEEEcChHHHHHHHHHHHHHhcCCCCEEE
Confidence            45789999999999999999999999999998864321 1 11111111001223455 333322 2   2234799999


Q ss_pred             ECCCCCCC---CCCChhhHHHHHHHhhhhHHHHHHHHHcC--CCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCChh-H
Q 018503          122 NLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-L  195 (355)
Q Consensus       122 ~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~~y-~  195 (355)
                      ||||....   ...+.+.+...+++|+.++..+.+++...  ..+..++|++||.... ++.          +....| .
T Consensus       401 nNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~ag~-~~~----------~~~~~Y~a  469 (604)
T 2et6_A          401 NNAGILRDRSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVEKQFGRIINITSTSGI-YGN----------FGQANYSS  469 (604)
T ss_dssp             ECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCHHHH-SCC----------TTBHHHHH
T ss_pred             ECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhc-cCC----------CCChhHHH
Confidence            99997533   24466778899999999988887766331  1345689999997652 221          223467 7


Q ss_pred             HHHHHHHHHHHhcc---CCCCeEEEEEecEEEeCCCCcccchHHHHHHHhCCCCCCCCcceecccHHHHHHHHHHHHhCC
Q 018503          196 AEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNP  272 (355)
Q Consensus       196 ~k~~~~~~~~~~~~---~~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~  272 (355)
                      +|.....+.+.+..   .+|+++..|.|+. ..+.   .....+             +........+|+|.+++.++...
T Consensus       470 sKaal~~lt~~la~El~~~gIrVn~v~PG~-~T~m---~~~~~~-------------~~~~~~~~pe~vA~~v~~L~s~~  532 (604)
T 2et6_A          470 SKAGILGLSKTMAIEGAKNNIKVNIVAPHA-ETAM---TLSIMR-------------EQDKNLYHADQVAPLLVYLGTDD  532 (604)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECC-CCCC-------------------------CCSSCGGGTHHHHHHTTSTT
T ss_pred             HHHHHHHHHHHHHHHhCccCeEEEEEcCCC-CCcc---ccccCc-------------hhhccCCCHHHHHHHHHHHhCCc
Confidence            77665555444333   3589999999983 1111   000000             00112457899999999988754


Q ss_pred             C--CCCceEecCCC-----------------ccCHHHHHHHHHHHhCCC
Q 018503          273 S--YRGVINGTAPN-----------------PVRLAEMCDHLGNVLGRP  302 (355)
Q Consensus       273 ~--~~~~~~i~~~~-----------------~~s~~el~~~i~~~~g~~  302 (355)
                      .  .+.++.+.+|.                 ..+..++.+.+.+.....
T Consensus       533 ~~itG~~~~vdGG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~  581 (604)
T 2et6_A          533 VPVTGETFEIGGGWIGNTRWQRAKGAVSHDEHTTVEFIKEHLNEITDFT  581 (604)
T ss_dssp             CCCCSCEEEEETTEEEEEEEEECCCEECCSSSCCHHHHHHHHHHHTCCS
T ss_pred             cCCCCcEEEECCCeeEeeeeeccccccCCCCCCCHHHHHHHHHHHhccc
Confidence            3  34466666552                 356677777777766544

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=99.27  E-value=4.4e-11  Score=114.22  Aligned_cols=221  Identities=13%  Similarity=0.062  Sum_probs=140.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCC---------chhhccC----CCCCCccCCCeeecCCcchhhhc-
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSR---------SKAELIF----PGKKTRFFPGVMIAEEPQWRDCI-  114 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~---------~~~~~~~----~~~~~~~~~~~d~~~~~~~~~~~-  114 (355)
                      +.+.++||||++.||+++++.|+++|++|++.+|+.         +......    ....   ....|+.|.+++.+++ 
T Consensus         7 ~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~~g~---~~~~d~~d~~~~~~~v~   83 (604)
T 2et6_A            7 KDKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKNGG---VAVADYNNVLDGDKIVE   83 (604)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECC-----------CHHHHHHHHHHHTTC---EEEEECCCTTCHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCccccccccchHHHHHHHHHHHhcCC---eEEEEcCCHHHHHHHHH
Confidence            347899999999999999999999999999998764         2221111    1010   1124666665444333 


Q ss_pred             ------CCCcEEEECCCCCCC---CCCChhhHHHHHHHhhhhHHHHHHHHHcC--CCCCCcEEEEeeeeeeeeCCCCCcc
Q 018503          115 ------QGSTAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEV  183 (355)
Q Consensus       115 ------~~~d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~~~~v~~Ss~~~~~yg~~~~~~  183 (355)
                            ..+|++|||||....   ...+.+.++..+++|+.++..+.+++...  +.+..++|++||.... ++.     
T Consensus        84 ~~~~~~G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~a~~p~m~~~~~G~IVnisS~ag~-~~~-----  157 (604)
T 2et6_A           84 TAVKNFGTVHVIINNAGILRDASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQKYGRIVNTSSPAGL-YGN-----  157 (604)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHH-HCC-----
T ss_pred             HHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCHHHc-CCC-----
Confidence                  468999999997532   23466778899999999988887766321  1345689999997652 331     


Q ss_pred             ccCCCCCCChh-HHHHHHHHHHHHhcc---CCCCeEEEEEecEEEeCCCCcccchHHHHHHHhCCCCCCCCcceecccHH
Q 018503          184 FDESSPSGNDY-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLD  259 (355)
Q Consensus       184 ~~e~~~~~~~y-~~k~~~~~~~~~~~~---~~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~  259 (355)
                           +....| .+|.....+.+.+..   .+|+++..|.|+ +..       .+..      .. .  ..........+
T Consensus       158 -----~~~~~Y~asKaal~~lt~~la~El~~~gIrVn~v~Pg-~~T-------~m~~------~~-~--~~~~~~~~~pe  215 (604)
T 2et6_A          158 -----FGQANYASAKSALLGFAETLAKEGAKYNIKANAIAPL-ARS-------RMTE------SI-M--PPPMLEKLGPE  215 (604)
T ss_dssp             -----TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-CCC-------HHHH------TT-S--CHHHHTTCSHH
T ss_pred             -----CCchHHHHHHHHHHHHHHHHHHHhCccCeEEEEEccC-CcC-------cccc------cc-C--ChhhhccCCHH
Confidence                 223467 777665555544433   358999999996 211       1110      00 0  00011235789


Q ss_pred             HHHHHHHHHHhCCC--CCCceEecCC------------------CccCHHHHHHHHHHHhC
Q 018503          260 DIVNLIYEALSNPS--YRGVINGTAP------------------NPVRLAEMCDHLGNVLG  300 (355)
Q Consensus       260 Dva~~~~~~~~~~~--~~~~~~i~~~------------------~~~s~~el~~~i~~~~g  300 (355)
                      |+|.+++.++....  .+..+.+.+|                  ...+..++.+.+.+...
T Consensus       216 ~vA~~v~~L~s~~~~itG~~~~vdgG~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~  276 (604)
T 2et6_A          216 KVAPLVLYLSSAENELTGQFFEVAAGFYAQIRWERSGGVLFKPDQSFTAEVVAKRFSEILD  276 (604)
T ss_dssp             HHHHHHHHHTSSSCCCCSCEEEEETTEEEEEEEEECCCEECCSSTTCCHHHHHHHHHHHTC
T ss_pred             HHHHHHHHHhCCcccCCCCEEEECCCeEEEEEEEeccceecCCCCCCCHHHHHHHHHHhhc
Confidence            99999999997643  3345655544                  23567888888877654

>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A*

Probab=99.23  E-value=1.5e-10  Score=120.32  Aligned_cols=224  Identities=15%  Similarity=0.060  Sum_probs=139.3

Q ss_pred             CCCEEEEEcCCch-HHHHHHHHHHhCCCeEEEE-ecCCchhhcc--------CCCCCCccCCCeeecCCcchhhhcC---
Q 018503           49 SQMTVSVTGATGF-IGRRLVQRLQADNHQVRVL-TRSRSKAELI--------FPGKKTRFFPGVMIAEEPQWRDCIQ---  115 (355)
Q Consensus        49 ~~~~IlVtGatG~-iG~~l~~~L~~~g~~V~~~-~r~~~~~~~~--------~~~~~~~~~~~~d~~~~~~~~~~~~---  115 (355)
                      +++++|||||+|. ||.++++.|++.|++|+++ .|+.......        ...........+|+.|.+++.++++   
T Consensus       674 ~gKvaLVTGASsGgIG~aIA~~La~~GA~Vvl~~~R~~~~l~~~~~eL~~~~~~~g~~v~~v~~DVsd~~sV~alv~~i~  753 (1887)
T 2uv8_A          674 KDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALIEFIY  753 (1887)
T ss_dssp             TTCEEEEESCCSSSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCCHHHHHHHHHHHHHHhhcCCCeEEEEEecCCCHHHHHHHHHHHH
Confidence            4578999999998 9999999999999999998 4655443211        0001111134578888887776542   


Q ss_pred             ----------CCcEEEECCCCCCCC----CCC--hhhHHHHHHHhhhhHHHHHHHHHcC---C-CCCCcEEEEeeeeeee
Q 018503          116 ----------GSTAVVNLAGTPIGT----RWS--SEIKKEIKESRIRVTSKVVDLINES---P-EGVRPSVLVSATALGY  175 (355)
Q Consensus       116 ----------~~d~vi~~a~~~~~~----~~~--~~~~~~~~~~n~~~~~~l~~a~~~~---~-~~~~~~v~~Ss~~~~~  175 (355)
                                .+|++|||||.....    ...  .+.+...+++|+.++..++++++..   . .+..+||++||.... 
T Consensus       754 ~~~~~~G~G~~LDiLVNNAGi~~~~~~l~d~t~~~e~~~~v~~vNv~g~~~l~~a~~~lp~m~~~~~G~IVnISS~ag~-  832 (1887)
T 2uv8_A          754 DTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILPMSPNHGT-  832 (1887)
T ss_dssp             SCTTTTSCCCCCSEEEECCCCCCCSBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCCSCCEEEEEEECSCTTC-
T ss_pred             HhccccccCCCCeEEEECCCcCCCCCChhhCCcchHHHHHHHHHHHHHHHHHHHHHHhhhhhhhCCCCEEEEEcChHhc-
Confidence                      589999999975322    223  4667889999999999999887431   1 123589999997541 


Q ss_pred             eCCCCCccccCCCCCCChh-HHHHHHHHH-HHHhccCC--CCeEEEEEecEEEeCCC-CcccchHHHHHHHhCCCCCCCC
Q 018503          176 YGTSETEVFDESSPSGNDY-LAEVCREWE-GTALKVNK--DVRLALIRIGIVLGKDG-GALAKMIPLFMMFAGGPLGSGQ  250 (355)
Q Consensus       176 yg~~~~~~~~e~~~~~~~y-~~k~~~~~~-~~~~~~~~--~~~~~i~Rp~~i~G~~~-~~~~~~~~~~~~~~~~~~~~~~  250 (355)
                      ++            ....| .+|.....+ ...+..+.  .++++.+.||++.+... .........   ....+     
T Consensus       833 ~g------------g~~aYaASKAAL~~Lttr~lA~ela~~IrVNaV~PG~V~tT~m~~~~~~~~~~---~~~~p-----  892 (1887)
T 2uv8_A          833 FG------------GDGMYSESKLSLETLFNRWHSESWANQLTVCGAIIGWTRGTGLMSANNIIAEG---IEKMG-----  892 (1887)
T ss_dssp             SS------------CBTTHHHHHHHGGGHHHHHHHSSCTTTEEEEEEEECCEECC-----CCTTHHH---HHTTS-----
T ss_pred             cC------------CCchHHHHHHHHHHHHHHHHHHHhCCCeEEEEEEecccccccccccchhHHHH---HHhcC-----
Confidence            11            12467 778766665 44333322  28999999999985321 110011111   11111     


Q ss_pred             cceecccHHHHHHHHHHHHhCC-C---CCCceEec--CCC--ccCHHHHHHHH
Q 018503          251 QWFSWIHLDDIVNLIYEALSNP-S---YRGVINGT--APN--PVRLAEMCDHL  295 (355)
Q Consensus       251 ~~~~~i~v~Dva~~~~~~~~~~-~---~~~~~~i~--~~~--~~s~~el~~~i  295 (355)
                        ..+...+|+|++++.++... .   .+..+.+.  +|.  ...+.++...+
T Consensus       893 --lr~~sPEEVA~avlfLaSd~~as~iTGq~I~VDVDGG~~~~~~l~el~~~l  943 (1887)
T 2uv8_A          893 --VRTFSQKEMAFNLLGLLTPEVVELCQKSPVMADLNGGLQFVPELKEFTAKL  943 (1887)
T ss_dssp             --CCCEEHHHHHHHHHGGGSHHHHHHHHHSCEEEEESCSTTTSSSHHHHHHHH
T ss_pred             --CCCCCHHHHHHHHHHHhCCCccccccCcEEEEECCCCeeccccHHHHHHHH
Confidence              12458999999999998754 1   23455552  443  23455554433

>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}

Probab=99.16  E-value=3.5e-11  Score=121.18  Aligned_cols=202  Identities=15%  Similarity=0.096  Sum_probs=128.5

Q ss_pred             CCCEEEEEcCCch-HHHHHHHHHHhCCCeEEEE-ecCCchhhc----cCCC----CCCccCCCeeecCCcchhhhcC---
Q 018503           49 SQMTVSVTGATGF-IGRRLVQRLQADNHQVRVL-TRSRSKAEL----IFPG----KKTRFFPGVMIAEEPQWRDCIQ---  115 (355)
Q Consensus        49 ~~~~IlVtGatG~-iG~~l~~~L~~~g~~V~~~-~r~~~~~~~----~~~~----~~~~~~~~~d~~~~~~~~~~~~---  115 (355)
                      +.+++|||||+|. ||+++++.|++.|++|+++ .|+.+....    +...    ........+|+.|.+++.++++   
T Consensus       475 ~GKvALVTGASgGGIGrAIAr~LA~~GA~VVL~~~R~~e~lee~a~eL~ael~a~Ga~V~vV~~DVTD~esVeaLVe~I~  554 (1688)
T 2pff_A          475 KDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALIEFIY  554 (1688)
T ss_dssp             CSCCEEECSCSSSSTHHHHHHHHHHHTCEEEEEESSCSTTTTTHHHHTTTTTCCTTCEEEEEECCSSSTTHHHHHHHHHH
T ss_pred             CCCEEEEECCChHHHHHHHHHHHHHCcCEEEEEeCCCHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCCHHHHHHHHHHHH
Confidence            4568999999998 9999999999999999998 465543321    1111    1111134578889988876652   


Q ss_pred             ----------CCcEEEECCCCCCCC----CCC--hhhHHHHHHHhhhhHHHHHHHHHc---CC-CCCCcEEEEeeeeeee
Q 018503          116 ----------GSTAVVNLAGTPIGT----RWS--SEIKKEIKESRIRVTSKVVDLINE---SP-EGVRPSVLVSATALGY  175 (355)
Q Consensus       116 ----------~~d~vi~~a~~~~~~----~~~--~~~~~~~~~~n~~~~~~l~~a~~~---~~-~~~~~~v~~Ss~~~~~  175 (355)
                                .+|++||+||.....    ...  .+.+...+++|+.++..++++++.   +. .+..+||++||.... 
T Consensus       555 e~~~~~GfG~~IDILVNNAGI~~~g~~l~dlt~s~Ed~~rv~~VNL~G~~~Ltqaa~~lp~M~krggGrIVnISSiAG~-  633 (1688)
T 2pff_A          555 DTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILPMSPNHGT-  633 (1688)
T ss_dssp             SCTTSSSCCCCCCEEECCCCCCCCSBCSSSCTTHHHHHHHHTTHHHHHHHHHHHHHHHHHTCTTSCEEECCCCCSCTTT-
T ss_pred             HhccccccCCCCeEEEECCCcCCCCCChhhCCCCHHHHHHHHHHHHHHHHHHHHHHHhChHHHhCCCCEEEEEEChHhc-
Confidence                      489999999975322    222  566788999999999999888722   11 223579999986541 


Q ss_pred             eCCCCCccccCCCCCCChh-HHHHHHHHH-HHHhccCC--CCeEEEEEecEEEeCCCCcccchHHHHHHHhCCCCCCCCc
Q 018503          176 YGTSETEVFDESSPSGNDY-LAEVCREWE-GTALKVNK--DVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQ  251 (355)
Q Consensus       176 yg~~~~~~~~e~~~~~~~y-~~k~~~~~~-~~~~~~~~--~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~  251 (355)
                      ++            ....| .+|...+.+ ...+..+.  .++++.+.||.+.+..........       ....  ...
T Consensus       634 ~G------------g~saYaASKAAL~aLttrsLAeEla~~IRVNaVaPG~V~TT~M~~~~e~~-------~~~l--~~i  692 (1688)
T 2pff_A          634 FG------------GDGMYSESKLSLETLFNRWHSESWANQLTVCGAIIGWTRGTGLMSANNII-------AEGI--EKM  692 (1688)
T ss_dssp             SS------------CBTTHHHHHHHHTHHHHHTTTSSCTTTEECCCCCCCCCCCCSSSCTTTTC-------STTT--SSS
T ss_pred             cC------------CchHHHHHHHHHHHHHHHHHHHHcCCCeEEEEEEECcCcCCcccCCchHH-------HHHH--HhC
Confidence            11            13468 778776666 34333322  278888899988753211000000       0000  011


Q ss_pred             ceecccHHHHHHHHHHHHhCC
Q 018503          252 WFSWIHLDDIVNLIYEALSNP  272 (355)
Q Consensus       252 ~~~~i~v~Dva~~~~~~~~~~  272 (355)
                      ...+...+|+|++++.++...
T Consensus       693 plR~~sPEEVA~aIlFLaSd~  713 (1688)
T 2pff_A          693 GVRTFSQKEMAFNLLGLLTPE  713 (1688)
T ss_dssp             SCCCCCCCTTHHHHHHHTSTT
T ss_pred             CCCCCCHHHHHHHHHHHhCCC
Confidence            112457899999999999765

>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A*

Probab=99.15  E-value=2.8e-10  Score=117.97  Aligned_cols=224  Identities=13%  Similarity=0.021  Sum_probs=138.0

Q ss_pred             CCCEEEEEcCCch-HHHHHHHHHHhCCCeEEEEe-cCCchhhc----c----CCCCCCccCCCeeecCCcchhhhcC---
Q 018503           49 SQMTVSVTGATGF-IGRRLVQRLQADNHQVRVLT-RSRSKAEL----I----FPGKKTRFFPGVMIAEEPQWRDCIQ---  115 (355)
Q Consensus        49 ~~~~IlVtGatG~-iG~~l~~~L~~~g~~V~~~~-r~~~~~~~----~----~~~~~~~~~~~~d~~~~~~~~~~~~---  115 (355)
                      +++++|||||+|. ||.++++.|++.|++|++++ |+......    +    ...........+|+.|.+++.++++   
T Consensus       651 ~gKvaLVTGASgGgIG~aIAr~LA~~GA~VVl~~~R~~~~l~~~a~eL~~el~~~G~~v~~v~~DVsd~esV~alv~~i~  730 (1878)
T 2uv9_A          651 QGKHALMTGAGAGSIGAEVLQGLLSGGAKVIVTTSRFSRQVTEYYQGIYARCGARGSQLVVVPFNQGSKQDVEALVNYIY  730 (1878)
T ss_dssp             TTCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCChHHHHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHHH
Confidence            4578999999999 99999999999999999986 54433211    1    1111111134578888888776652   


Q ss_pred             --------CCcEEEECCCCCCCC----CCC--hhhHHHHHHHhhhhHHHHHHHHH---cCC-CCCCcEEEEeeeeeeeeC
Q 018503          116 --------GSTAVVNLAGTPIGT----RWS--SEIKKEIKESRIRVTSKVVDLIN---ESP-EGVRPSVLVSATALGYYG  177 (355)
Q Consensus       116 --------~~d~vi~~a~~~~~~----~~~--~~~~~~~~~~n~~~~~~l~~a~~---~~~-~~~~~~v~~Ss~~~~~yg  177 (355)
                              .+|++|||||.....    ...  .+.+...+++|+.++..++++++   .+. .+..+||++||.... ++
T Consensus       731 ~~~~~~G~~IDiLVnNAGi~~~~~~l~d~t~~~e~~~~vl~vNv~g~~~l~~a~~~lp~M~~~~~G~IVnISS~ag~-~g  809 (1878)
T 2uv9_A          731 DTKNGLGWDLDYVVPFAAIPENGREIDSIDSKSELAHRIMLTNLLRLLGAIKTQKKERGYETRPAQVILPLSPNHGT-FG  809 (1878)
T ss_dssp             CSSSSCCCCCSEEEECCCCCCTTCCTTCCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCSCCEEECCEECSCSSS-SS
T ss_pred             HhhcccCCCCcEEEeCcccccCCCChhhcCcCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhCCCCEEEEEcchhhc-cC
Confidence                    589999999975322    223  46678899999999998887632   221 233589999997541 22


Q ss_pred             CCCCccccCCCCCCChh-HHHHHHHHHHHHhcc---CCCCeEEEEEecEEE-eCCCCcccchHHHHHHHhCCCCCCCCcc
Q 018503          178 TSETEVFDESSPSGNDY-LAEVCREWEGTALKV---NKDVRLALIRIGIVL-GKDGGALAKMIPLFMMFAGGPLGSGQQW  252 (355)
Q Consensus       178 ~~~~~~~~e~~~~~~~y-~~k~~~~~~~~~~~~---~~~~~~~i~Rp~~i~-G~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (355)
                                  ....| .+|...+.+...+..   ..+++++.+.||++- .+..... ...  .......++      
T Consensus       810 ------------g~~aYaASKAAL~aLt~~laAeEla~~IrVNaVaPG~V~gT~m~~~~-~~~--~~~~~~~pl------  868 (1878)
T 2uv9_A          810 ------------NDGLYSESKLALETLFNRWYSESWGNYLTICGAVIGWTRGTGLMSAN-NLV--AEGVEKLGV------  868 (1878)
T ss_dssp             ------------CCSSHHHHHHHHTTHHHHHHHSTTTTTEEEEEEEECCBCCTTSCSHH-HHT--HHHHHTTTC------
T ss_pred             ------------CchHHHHHHHHHHHHHHHHHHHHcCCCeEEEEEEecceecCcccccc-hhh--HHHHHhcCC------
Confidence                        13468 777766665432221   123899999999887 3322110 000  111111111      


Q ss_pred             eecccHHHHHHHHHHHHhCCC----CCCceEe--cCCC--ccCHHHHHHHH
Q 018503          253 FSWIHLDDIVNLIYEALSNPS----YRGVING--TAPN--PVRLAEMCDHL  295 (355)
Q Consensus       253 ~~~i~v~Dva~~~~~~~~~~~----~~~~~~i--~~~~--~~s~~el~~~i  295 (355)
                       .+...+|+|++++.++....    .+..+.+  .+|.  ...+.++...+
T Consensus       869 -r~~sPeEVA~avlfLaSd~a~s~iTGq~I~VDVDGG~~~~~~l~el~~~l  918 (1878)
T 2uv9_A          869 -RTFSQQEMAFNLLGLMAPAIVNLCQSDPVFADLNGGLQFIPDLKGLMTKL  918 (1878)
T ss_dssp             -CCBCHHHHHHHHHHHHSHHHHHHHTTSCEEEEESCSGGGCTTHHHHHHHH
T ss_pred             -CCCCHHHHHHHHHHHhCCcccccccCcEEEEEcCCCccccCCHHHHHHHH
Confidence             24589999999999886532    2445555  2442  24556665544

>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}

Probab=99.14  E-value=5.3e-11  Score=88.84  Aligned_cols=92  Identities=18%  Similarity=0.177  Sum_probs=70.1

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCC-CeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcCCCcEEEECCCCCC
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADN-HQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTPI  128 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~~~  128 (355)
                      +|+|+|+|+ |++|+++++.|.+.| ++|++++|++++.........  .....|+.+.+.+.++++++|+||++++.. 
T Consensus         5 ~~~v~I~G~-G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~--~~~~~d~~~~~~~~~~~~~~d~vi~~~~~~-   80 (118)
T 3ic5_A            5 RWNICVVGA-GKIGQMIAALLKTSSNYSVTVADHDLAALAVLNRMGV--ATKQVDAKDEAGLAKALGGFDAVISAAPFF-   80 (118)
T ss_dssp             CEEEEEECC-SHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHHTTTC--EEEECCTTCHHHHHHHTTTCSEEEECSCGG-
T ss_pred             cCeEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhCCC--cEEEecCCCHHHHHHHHcCCCEEEECCCch-
Confidence            468999999 999999999999999 999999999876554432110  123457778888989999999999998531 


Q ss_pred             CCCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcE
Q 018503          129 GTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPS  165 (355)
Q Consensus       129 ~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~  165 (355)
                                        ....+++++.+  .+++++
T Consensus        81 ------------------~~~~~~~~~~~--~g~~~~   97 (118)
T 3ic5_A           81 ------------------LTPIIAKAAKA--AGAHYF   97 (118)
T ss_dssp             ------------------GHHHHHHHHHH--TTCEEE
T ss_pred             ------------------hhHHHHHHHHH--hCCCEE
Confidence                              12467788888  576544

>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*

Probab=99.13  E-value=2.7e-10  Score=101.45  Aligned_cols=205  Identities=8%  Similarity=-0.103  Sum_probs=125.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHh-CCCeEEEEecCCchhhc----------------cCCCCCCccCCCeeecCCcchh
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQA-DNHQVRVLTRSRSKAEL----------------IFPGKKTRFFPGVMIAEEPQWR  111 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~-~g~~V~~~~r~~~~~~~----------------~~~~~~~~~~~~~d~~~~~~~~  111 (355)
                      .++++|||||++.||.++++.|++ .|.+|++++|+.+....                ............+|+.|++++.
T Consensus        46 ~gKvaLVTGas~GIG~AiA~~LA~g~GA~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~~~G~~a~~i~~Dvtd~~~v~  125 (405)
T 3zu3_A           46 GPKRVLVIGASTGYGLAARITAAFGCGADTLGVFFERPGEEGKPGTSGWYNSAAFHKFAAQKGLYAKSINGDAFSDEIKQ  125 (405)
T ss_dssp             CCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCBTTBCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTSHHHHH
T ss_pred             CCCEEEEeCcchHHHHHHHHHHHHhcCCEEEEEeCCchhhhhhcccccchhHHHHHHHHHhcCCceEEEECCCCCHHHHH
Confidence            457899999999999999999999 99999999887643211                1111111113456888888776


Q ss_pred             hhc-------CCCcEEEECCCCCC---------------C----------------------CCCChhhHHHHHHHhhhh
Q 018503          112 DCI-------QGSTAVVNLAGTPI---------------G----------------------TRWSSEIKKEIKESRIRV  147 (355)
Q Consensus       112 ~~~-------~~~d~vi~~a~~~~---------------~----------------------~~~~~~~~~~~~~~n~~~  147 (355)
                      +++       ..+|++||+||...               +                      ...+.+.+...+++|..+
T Consensus       126 ~~v~~i~~~~G~IDiLVNNAG~~~r~~p~tG~~~~s~~~pig~~~~~~~~d~~~~~~~~~~i~~~t~ee~~~~v~Vn~~~  205 (405)
T 3zu3_A          126 LTIDAIKQDLGQVDQVIYSLASPRRTHPKTGEVFNSALKPIGNAVNLRGLDTDKEVIKESVLQPATQSEIDSTVAVMGGE  205 (405)
T ss_dssp             HHHHHHHHHTSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHHHSSH
T ss_pred             HHHHHHHHHcCCCCEEEEcCccccccCccccccccccccccccccccccccccccccccccCCCCCHHHHHHHHHhhchh
Confidence            555       36899999998731               1                      224567778888888877


Q ss_pred             HH-HHHHHHHc--CCCCCCcEEEEeeeeeeeeCCCCCccccCCCCCC--Chh-HHHHHHHHHHHHhcc---CC-CCeEEE
Q 018503          148 TS-KVVDLINE--SPEGVRPSVLVSATALGYYGTSETEVFDESSPSG--NDY-LAEVCREWEGTALKV---NK-DVRLAL  217 (355)
Q Consensus       148 ~~-~l~~a~~~--~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~--~~y-~~k~~~~~~~~~~~~---~~-~~~~~i  217 (355)
                      .. .+++++..  +.....++|.+||.+.  .-         ..+..  ..| .+|...+.+.+.+..   .. |+++..
T Consensus       206 ~~~~~~~~~~~~~m~~~gG~IVniSSi~~--~~---------~~p~~~~~aY~AaKaal~~ltrsLA~Ela~~~GIRVNa  274 (405)
T 3zu3_A          206 DWQMWIDALLDAGVLAEGAQTTAFTYLGE--KI---------THDIYWNGSIGAAKKDLDQKVLAIRESLAAHGGGDARV  274 (405)
T ss_dssp             HHHHHHHHHHHHTCEEEEEEEEEEECCCC--GG---------GTTTTTTSHHHHHHHHHHHHHHHHHHHHHTTTSCEEEE
T ss_pred             HHHHHHHHHHHHhhhhCCcEEEEEeCchh--hC---------cCCCccchHHHHHHHHHHHHHHHHHHHhCcccCeEEEE
Confidence            65 45555432  1112357999998754  11         11222  567 777665555444333   35 899999


Q ss_pred             EEecEEEeCCCCcccchHHHHHHHhCCCCCCCCcceecccHHHHHHHHHHHHhC
Q 018503          218 IRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSN  271 (355)
Q Consensus       218 ~Rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~  271 (355)
                      +.||.+-.+..........+..... .++      ..+-..+|+++++..++..
T Consensus       275 VaPG~i~T~~s~~ip~~p~y~~~l~-~~m------kr~G~~Ed~a~~i~~L~sd  321 (405)
T 3zu3_A          275 SVLKAVVSQASSAIPMMPLYLSLLF-KVM------KEKGTHEGCIEQVYSLYKD  321 (405)
T ss_dssp             EECCCCCCHHHHTSTTHHHHHHHHH-HHH------HHHTCCCCHHHHHHHHHHH
T ss_pred             EEeCCCcCchhhcCCCCcHHHHHHH-HHH------hcCCCcHHHHHHHHHHHhc
Confidence            9999887653211111101110000 011      1123346889999998875

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=99.12  E-value=9.8e-11  Score=115.23  Aligned_cols=200  Identities=16%  Similarity=0.136  Sum_probs=135.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHH-hCCC-eEEEEecCCchh---hcc----CCCCCCccCCCeeecCCcchhhhcC----
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQ-ADNH-QVRVLTRSRSKA---ELI----FPGKKTRFFPGVMIAEEPQWRDCIQ----  115 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~-~~g~-~V~~~~r~~~~~---~~~----~~~~~~~~~~~~d~~~~~~~~~~~~----  115 (355)
                      +.++++||||+|.||++++++|. ++|. .|+.++|+....   ...    ...........+|+.|.+++.++++    
T Consensus       529 ~~~~~lItGg~~GlG~aiA~~la~~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~G~~v~~~~~Dvsd~~~v~~~~~~~~~  608 (795)
T 3slk_A          529 AAGTVLVTGGTGALGAEVARHLVIERGVRNLVLVSRRGPAASGAAELVAQLTAYGAEVSLQACDVADRETLAKVLASIPD  608 (795)
T ss_dssp             TTSEEEEETTTSHHHHHHHHHHHHTSSCCEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCT
T ss_pred             cccceeeccCCCCcHHHHHHHHHHHcCCcEEEEeccCccchHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Confidence            45789999999999999999999 7898 599999984322   111    1111111234579999998887774    


Q ss_pred             --CCcEEEECCCCCCC---CCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCCCCccccCCCCC
Q 018503          116 --GSTAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPS  190 (355)
Q Consensus       116 --~~d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~  190 (355)
                        .+|+|||+||....   ...+.+.+...+++|+.++.++.+++..   .. +||++||.+.. .|.          +.
T Consensus       609 ~~~id~lVnnAGv~~~~~~~~~t~e~~~~~~~~nv~G~~~l~~~~~~---~l-~iV~~SS~ag~-~g~----------~g  673 (795)
T 3slk_A          609 EHPLTAVVHAAGVLDDGVSESLTVERLDQVLRPKVDGARNLLELIDP---DV-ALVLFSSVSGV-LGS----------GG  673 (795)
T ss_dssp             TSCEEEEEECCCCCCCCCGGGCCHHHHHHHHCCCCCHHHHHHHHSCT---TS-EEEEEEETHHH-HTC----------SS
T ss_pred             hCCCEEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHhh---CC-EEEEEccHHhc-CCC----------CC
Confidence              36999999998543   3445677889999999999999998844   34 89999997652 332          22


Q ss_pred             CChh-HHHHHHHHHHHHhccCCCCeEEEEEecEEEeCCCCcccchHHH-HHHHhCCCCCCCCcceecccHHHHHHHHHHH
Q 018503          191 GNDY-LAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPL-FMMFAGGPLGSGQQWFSWIHLDDIVNLIYEA  268 (355)
Q Consensus       191 ~~~y-~~k~~~~~~~~~~~~~~~~~~~i~Rp~~i~G~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~  268 (355)
                      ...| .+|...+.+...+.. .|++++.+.||.+-..+..  ..+... ......       .....+..+++...+..+
T Consensus       674 ~~~YaAaka~~~alA~~~~~-~Gi~v~sI~pG~v~t~g~~--~~~~~~~~~~~~~-------~g~~~l~~~e~~~~~~~~  743 (795)
T 3slk_A          674 QGNYAAANSFLDALAQQRQS-RGLPTRSLAWGPWAEHGMA--STLREAEQDRLAR-------SGLLPISTEEGLSQFDAA  743 (795)
T ss_dssp             CHHHHHHHHHHHHHHHHHHH-TTCCEEEEEECCCSCCCHH--HHHHHHHHHHHHH-------TTBCCCCHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHHHHH-cCCeEEEEECCeECcchhh--ccccHHHHHHHHh-------cCCCCCCHHHHHHHHHHH
Confidence            3467 777666666655543 5999999999987654311  011110 111111       112347778888888888


Q ss_pred             HhCCC
Q 018503          269 LSNPS  273 (355)
Q Consensus       269 ~~~~~  273 (355)
                      +..+.
T Consensus       744 l~~~~  748 (795)
T 3slk_A          744 CGGAH  748 (795)
T ss_dssp             HTSSC
T ss_pred             HhCCC
Confidence            87654

>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A

Probab=99.11  E-value=1.8e-10  Score=101.61  Aligned_cols=116  Identities=15%  Similarity=0.161  Sum_probs=81.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCC--CeEEEEecCCchhhc--cCCCCCCccCCCee-ecCCcchhhhcCCCcEEEEC
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADN--HQVRVLTRSRSKAEL--IFPGKKTRFFPGVM-IAEEPQWRDCIQGSTAVVNL  123 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~--~~~~~~~~~~~~~d-~~~~~~~~~~~~~~d~vi~~  123 (355)
                      ++|||+|+||+|++|.+++..|++.|  ++|+++++++.....  +.....   ...+. +.+.+++.++++++|+|||+
T Consensus         7 ~~mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~Di~~~~~~~~dL~~~~~---~~~v~~~~~t~d~~~al~gaDvVi~~   83 (326)
T 1smk_A            7 PGFKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNAPGVTADISHMDT---GAVVRGFLGQQQLEAALTGMDLIIVP   83 (326)
T ss_dssp             -CEEEEEETTTSTTHHHHHHHHHHCTTEEEEEEEESSSHHHHHHHHHTSCS---SCEEEEEESHHHHHHHHTTCSEEEEC
T ss_pred             CCCEEEEECCCChHHHHHHHHHHhCCCCCEEEEEeCCCcHhHHHHhhcccc---cceEEEEeCCCCHHHHcCCCCEEEEc
Confidence            34799999999999999999999988  899999987652211  111100   00111 11245677889999999999


Q ss_pred             CCCCCCCCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeee
Q 018503          124 AGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATA  172 (355)
Q Consensus       124 a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~  172 (355)
                      |+.+....   ....++...|+.+++++++++.+  .+.+.+++++|--
T Consensus        84 ag~~~~~g---~~r~dl~~~N~~~~~~i~~~i~~--~~p~~~viv~SNP  127 (326)
T 1smk_A           84 AGVPRKPG---MTRDDLFKINAGIVKTLCEGIAK--CCPRAIVNLISNP  127 (326)
T ss_dssp             CCCCCCSS---CCCSHHHHHHHHHHHHHHHHHHH--HCTTSEEEECCSS
T ss_pred             CCcCCCCC---CCHHHHHHHHHHHHHHHHHHHHh--hCCCeEEEEECCc
Confidence            99753221   11236688999999999999998  5667788887643

>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}

Probab=99.05  E-value=4.8e-10  Score=100.75  Aligned_cols=208  Identities=11%  Similarity=-0.095  Sum_probs=124.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHh-CCCeEEEEecCCchhhc----------------cCCCCCCccCCCeeecCCcchh
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQA-DNHQVRVLTRSRSKAEL----------------IFPGKKTRFFPGVMIAEEPQWR  111 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~-~g~~V~~~~r~~~~~~~----------------~~~~~~~~~~~~~d~~~~~~~~  111 (355)
                      .++++|||||++.||+++++.|++ .|.+|++++|+......                ............+|+.|++++.
T Consensus        60 ~gKvaLVTGASsGIG~AiA~~LA~~~GA~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~~~G~~a~~i~~Dvtd~~~v~  139 (422)
T 3s8m_A           60 GPKKVLVIGASSGYGLASRITAAFGFGADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKAAGLYSKSINGDAFSDAARA  139 (422)
T ss_dssp             SCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTSHHHHH
T ss_pred             CCCEEEEECCChHHHHHHHHHHHHhCCCEEEEEeCCchhhhhhhcccccchhHHHHHHHHhcCCcEEEEEecCCCHHHHH
Confidence            357999999999999999999999 99999999987654321                1111111113356888887665


Q ss_pred             hhc--------CCCcEEEECCCCC-------------C--CC----------------------CCChhhHHHHHHHhhh
Q 018503          112 DCI--------QGSTAVVNLAGTP-------------I--GT----------------------RWSSEIKKEIKESRIR  146 (355)
Q Consensus       112 ~~~--------~~~d~vi~~a~~~-------------~--~~----------------------~~~~~~~~~~~~~n~~  146 (355)
                      +++        ..+|++||+||..             .  +.                      ..+.+.+...+++|..
T Consensus       140 ~~v~~i~~~~~G~IDiLVNNAG~~~r~~p~~G~~~~~~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~v~Vn~~  219 (422)
T 3s8m_A          140 QVIELIKTEMGGQVDLVVYSLASPVRKLPGSGEVKRSALKPIGQTYTATAIDTNKDTIIQASIEPASAQEIEDTITVMGG  219 (422)
T ss_dssp             HHHHHHHHHSCSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHHHSS
T ss_pred             HHHHHHHHHcCCCCCEEEEcCccccccccccccccccccccccccccccccccccccccccccCCCCHHHHHHHHHhhch
Confidence            443        4689999999862             0  10                      2355667777777776


Q ss_pred             hHH-HHHHHHHc--CCCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCChh-HHHHHHHHHHHHhcc---CCCCeEEEEE
Q 018503          147 VTS-KVVDLINE--SPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-LAEVCREWEGTALKV---NKDVRLALIR  219 (355)
Q Consensus       147 ~~~-~l~~a~~~--~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~~y-~~k~~~~~~~~~~~~---~~~~~~~i~R  219 (355)
                      +.. .+++++..  +..+..++|.+||.+.  .-   ..+.    .....| .+|.....+.+.+..   ..|+++..+.
T Consensus       220 ~~~~~~~~a~~~~~m~~~gG~IVniSSi~g--~~---~~p~----~~~~aY~ASKaAl~~lTrsLA~Ela~~GIRVNaVa  290 (422)
T 3s8m_A          220 QDWELWIDALEGAGVLADGARSVAFSYIGT--EI---TWPI----YWHGALGKAKVDLDRTAQRLNARLAKHGGGANVAV  290 (422)
T ss_dssp             HHHHHHHHHHHHTTCEEEEEEEEEEEECCC--GG---GHHH----HTSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEE
T ss_pred             hHHHHHHHHHHHHHHhhCCCEEEEEeCchh--hc---cCCC----ccchHHHHHHHHHHHHHHHHHHHhCccCEEEEEEE
Confidence            654 55665533  1112357999998754  11   1010    001456 667655555444333   3589999999


Q ss_pred             ecEEEeCCCCcccchHHHHHHHhCCCCCCCCcceecccHHHHHHHHHHHHhCC
Q 018503          220 IGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNP  272 (355)
Q Consensus       220 p~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~  272 (355)
                      ||.+-.+............... ..++      ...-..+|+|+++..++...
T Consensus       291 PG~i~T~~~~~ip~~~~~~~~~-~~~m------~r~G~pEdva~~v~~L~sd~  336 (422)
T 3s8m_A          291 LKSVVTQASAAIPVMPLYISMV-YKIM------KEKGLHEGTIEQLDRLFRER  336 (422)
T ss_dssp             ECCCCCTTGGGSTHHHHHHHHH-HHHH------HHTTCCCCHHHHHHHHHHHT
T ss_pred             cCCCcChhhhcCCCChHHHHHH-Hhhh------cCCcChHHHHHHHHHHhcch
Confidence            9999876533221111111000 0011      01222378899999888653

>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*

Probab=99.04  E-value=9.3e-10  Score=96.55  Aligned_cols=114  Identities=20%  Similarity=0.251  Sum_probs=80.3

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhCCC--eEEEEec--CCchhhc----cCCCCCCccCCCeeecCCc-chhhhcCCCcEEE
Q 018503           51 MTVSVTGATGFIGRRLVQRLQADNH--QVRVLTR--SRSKAEL----IFPGKKTRFFPGVMIAEEP-QWRDCIQGSTAVV  121 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~g~--~V~~~~r--~~~~~~~----~~~~~~~~~~~~~d~~~~~-~~~~~~~~~d~vi  121 (355)
                      |||+||||+|++|++++..|+..|+  ++..+++  +..+...    +..... .....+++.+.+ ++.++++++|+||
T Consensus         1 mKI~V~GaaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~-~~~~~~~i~~~~d~l~~al~gaD~Vi   79 (313)
T 1hye_A            1 MKVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALA-GTRSDANIYVESDENLRIIDESDVVI   79 (313)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHT-TSCCCCEEEEEETTCGGGGTTCSEEE
T ss_pred             CEEEEECCCChhHHHHHHHHHhCCCCCEEEEEcCCCchhhhHHHHHHHHHhHH-hcCCCeEEEeCCcchHHHhCCCCEEE
Confidence            6899999999999999999998874  6777887  4322110    100000 001234665543 4778899999999


Q ss_pred             ECCCCCCCCCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeee
Q 018503          122 NLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSAT  171 (355)
Q Consensus       122 ~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~  171 (355)
                      |+||.+...   .....+++..|+..++++++++++  .+ +++++++|-
T Consensus        80 ~~Ag~~~~~---g~~r~dl~~~N~~i~~~i~~~i~~--~~-~~~vlv~SN  123 (313)
T 1hye_A           80 ITSGVPRKE---GMSRMDLAKTNAKIVGKYAKKIAE--IC-DTKIFVITN  123 (313)
T ss_dssp             ECCSCCCCT---TCCHHHHHHHHHHHHHHHHHHHHH--HC-CCEEEECSS
T ss_pred             ECCCCCCCC---CCcHHHHHHHHHHHHHHHHHHHHH--hC-CeEEEEecC
Confidence            999975321   223457789999999999999999  56 777787764

>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A

Probab=99.04  E-value=6.2e-10  Score=98.38  Aligned_cols=115  Identities=16%  Similarity=0.159  Sum_probs=82.2

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCC-------eEEEEecC----Cchhh----ccCCCCCCccCCCeeecCCcchhhhc
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNH-------QVRVLTRS----RSKAE----LIFPGKKTRFFPGVMIAEEPQWRDCI  114 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~-------~V~~~~r~----~~~~~----~~~~~~~~~~~~~~d~~~~~~~~~~~  114 (355)
                      +|||+||||+|++|++++..|+..|+       +|..++++    .++..    .+.....  .+ ..++...+++.+++
T Consensus         5 ~~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~dl~~~~~--~~-~~~i~~~~~~~~al   81 (329)
T 1b8p_A            5 PMRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNEKAQKALQGVMMEIDDCAF--PL-LAGMTAHADPMTAF   81 (329)
T ss_dssp             CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCSCHHHHHHHHHHHHHHHTTTC--TT-EEEEEEESSHHHHT
T ss_pred             CCEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCCCccccccchhhHHHHhhhcc--cc-cCcEEEecCcHHHh
Confidence            47999999999999999999999885       89999887    32221    1111100  01 23666667788889


Q ss_pred             CCCcEEEECCCCCCCCCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEee
Q 018503          115 QGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSA  170 (355)
Q Consensus       115 ~~~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss  170 (355)
                      +++|+|||+||.+..   ......+++..|+..++++++++.+.+....+++++|.
T Consensus        82 ~~aD~Vi~~ag~~~~---~g~~r~dl~~~N~~i~~~i~~~i~~~~~p~a~ii~~SN  134 (329)
T 1b8p_A           82 KDADVALLVGARPRG---PGMERKDLLEANAQIFTVQGKAIDAVASRNIKVLVVGN  134 (329)
T ss_dssp             TTCSEEEECCCCCCC---TTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSS
T ss_pred             CCCCEEEEeCCCCCC---CCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEccC
Confidence            999999999997532   22234578899999999999999883102337878775

>4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A*

Probab=99.00  E-value=2.6e-09  Score=96.78  Aligned_cols=168  Identities=9%  Similarity=-0.100  Sum_probs=107.0

Q ss_pred             CCCCEEEEEcCCchHHHH--HHHHHHhCCCeEEEEecCCchhh------------cc----CCCCCCccCCCeeecCCcc
Q 018503           48 ASQMTVSVTGATGFIGRR--LVQRLQADNHQVRVLTRSRSKAE------------LI----FPGKKTRFFPGVMIAEEPQ  109 (355)
Q Consensus        48 ~~~~~IlVtGatG~iG~~--l~~~L~~~g~~V~~~~r~~~~~~------------~~----~~~~~~~~~~~~d~~~~~~  109 (355)
                      ..++++|||||++.||.+  +++.|.+.|++|++++|+.....            ..    ...........+|+.|.++
T Consensus        58 ~~gK~aLVTGassGIG~A~aia~ala~~Ga~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvtd~~~  137 (418)
T 4eue_A           58 RGPKKVLIVGASSGFGLATRISVAFGGPEAHTIGVSYETGATDRRIGTAGWYNNIFFKEFAKKKGLVAKNFIEDAFSNET  137 (418)
T ss_dssp             CCCSEEEEESCSSHHHHHHHHHHHHSSSCCEEEEEECCCCCCSSCCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTCHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHHhCCCEEEEEecCcchhhhcccccccchHHHHHHHHHHcCCcEEEEEeeCCCHHH
Confidence            345799999999999999  99999999999999999754321            00    0011111133578888887


Q ss_pred             hhhhc-------CCCcEEEECCCCC-------------CC------------------------CCCChhhHHHHHHHhh
Q 018503          110 WRDCI-------QGSTAVVNLAGTP-------------IG------------------------TRWSSEIKKEIKESRI  145 (355)
Q Consensus       110 ~~~~~-------~~~d~vi~~a~~~-------------~~------------------------~~~~~~~~~~~~~~n~  145 (355)
                      +.+++       ..+|++||+||..             ..                        .....+.+...+++|.
T Consensus       138 v~~~v~~i~~~~G~IDiLVnNAG~~~r~~~~~g~~~~s~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~~~vn~  217 (418)
T 4eue_A          138 KDKVIKYIKDEFGKIDLFVYSLAAPRRKDYKTGNVYTSRIKTILGDFEGPTIDVERDEITLKKVSSASIEEIEETRKVMG  217 (418)
T ss_dssp             HHHHHHHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCBSSSCEEEEEEETTTTEEEEEEECBCCHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHcCCCCEEEECCcccccccccccccccccccccccccccccccccccccccccccCCCHHHHHHHHHHhh
Confidence            76655       3589999999863             00                        1224566667777776


Q ss_pred             hhHH-HHHHHHHcC--CCCCCcEEEEeeeeeeeeCCCCCccccCCCCCC--Chh-HHHHHHHHHHHHhcc---C-CCCeE
Q 018503          146 RVTS-KVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSG--NDY-LAEVCREWEGTALKV---N-KDVRL  215 (355)
Q Consensus       146 ~~~~-~l~~a~~~~--~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~--~~y-~~k~~~~~~~~~~~~---~-~~~~~  215 (355)
                      .+.. .+++++...  .....++|.+||.+.  .-         ..+..  ..| .+|...+.+...++.   . .|+++
T Consensus       218 ~~~~~~~~~~l~~~~~~~~gg~IV~iSSi~~--~~---------~~p~~~~~aY~ASKaAL~~ltrsLA~ELa~~~GIrV  286 (418)
T 4eue_A          218 GEDWQEWCEELLYEDCFSDKATTIAYSYIGS--PR---------TYKIYREGTIGIAKKDLEDKAKLINEKLNRVIGGRA  286 (418)
T ss_dssp             SHHHHHHHHHHHHTTCEEEEEEEEEEECCCC--GG---------GTTTTTTSHHHHHHHHHHHHHHHHHHHHHHHHSCEE
T ss_pred             HHHHHHHHHHHHHHhhhcCCcEEEEEeCchh--cC---------CCCccccHHHHHHHHHHHHHHHHHHHHhCCccCeEE
Confidence            6554 455554431  112347888888654  11         11223  567 777655544443333   2 48999


Q ss_pred             EEEEecEEEeC
Q 018503          216 ALIRIGIVLGK  226 (355)
Q Consensus       216 ~i~Rp~~i~G~  226 (355)
                      ..+.||.+-.+
T Consensus       287 N~V~PG~v~T~  297 (418)
T 4eue_A          287 FVSVNKALVTK  297 (418)
T ss_dssp             EEEECCCCCCH
T ss_pred             EEEECCcCcCh
Confidence            99999988765

>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A

Probab=98.98  E-value=1.3e-09  Score=95.05  Aligned_cols=114  Identities=15%  Similarity=0.174  Sum_probs=76.7

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhCCC--eEEEEec--CCchhhccCCCCCCc--cCCCeeecCCcchhhhcCCCcEEEECC
Q 018503           51 MTVSVTGATGFIGRRLVQRLQADNH--QVRVLTR--SRSKAELIFPGKKTR--FFPGVMIAEEPQWRDCIQGSTAVVNLA  124 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~g~--~V~~~~r--~~~~~~~~~~~~~~~--~~~~~d~~~~~~~~~~~~~~d~vi~~a  124 (355)
                      |||+|+||+|++|++++..|+..|+  ++..+++  +.++...........  ....+.+.. +. .++++++|+|||+|
T Consensus         1 mKI~IiGAaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~v~~-~~-~~a~~~aDvVi~~a   78 (303)
T 1o6z_A            1 TKVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQ-GG-YEDTAGSDVVVITA   78 (303)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEE-CC-GGGGTTCSEEEECC
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEcCCCChhhHHHHHHHHHHHHhhCCCcEEEe-CC-HHHhCCCCEEEEcC
Confidence            6899999999999999999998875  6888887  443221100000000  011122222 22 56688999999999


Q ss_pred             CCCCCCCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeee
Q 018503          125 GTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSAT  171 (355)
Q Consensus       125 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~  171 (355)
                      +.+...   .....+++..|+..++++++++.+  .+.+.+++++|-
T Consensus        79 g~~~~~---g~~r~dl~~~N~~i~~~i~~~i~~--~~p~~~viv~SN  120 (303)
T 1o6z_A           79 GIPRQP---GQTRIDLAGDNAPIMEDIQSSLDE--HNDDYISLTTSN  120 (303)
T ss_dssp             CCCCCT---TCCHHHHHHHHHHHHHHHHHHHHT--TCSCCEEEECCS
T ss_pred             CCCCCC---CCCHHHHHHHHHHHHHHHHHHHHH--HCCCcEEEEeCC
Confidence            975321   223346789999999999999999  566777787664

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=98.76  E-value=8.4e-09  Score=112.49  Aligned_cols=164  Identities=16%  Similarity=0.137  Sum_probs=107.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCe-EEEEecCCchhh-------ccCCCCCCccCCCeeecCCcchhhhcC-----
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQ-VRVLTRSRSKAE-------LIFPGKKTRFFPGVMIAEEPQWRDCIQ-----  115 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~-V~~~~r~~~~~~-------~~~~~~~~~~~~~~d~~~~~~~~~~~~-----  115 (355)
                      ..++++||||+|.||++++++|+++|++ |+.++|+..+..       .+...........+|+.|.+++.++++     
T Consensus      1883 ~~k~~lITGgs~GIG~aia~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~ 1962 (2512)
T 2vz8_A         1883 PHKSYVITGGLGGFGLQLAQWLRLRGAQKLVLTSRSGIRTGYQARQVREWRRQGVQVLVSTSNASSLDGARSLITEATQL 1962 (2512)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCCEEEEECSSCCCSHHHHHHHHHHHHTTCEEEEECCCSSSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCHHHHHHHHHHHCCCCEEEEEeCCCcchHHHHHHHHHHHhCCCEEEEEecCCCCHHHHHHHHHHHHhc
Confidence            4578999999999999999999999987 788888864321       111111111134578888887776553     


Q ss_pred             -CCcEEEECCCCCCC---CCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCCCCccccCCCCCC
Q 018503          116 -GSTAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSG  191 (355)
Q Consensus       116 -~~d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~  191 (355)
                       .+|+|||+||....   ...+.+.+...+++|+.++.++.+++........+||++||.... .|.          +..
T Consensus      1963 g~id~lVnnAgv~~~~~~~~~t~e~~~~~~~~nv~g~~~l~~~~~~~~~~~g~iV~iSS~ag~-~g~----------~g~ 2031 (2512)
T 2vz8_A         1963 GPVGGVFNLAMVLRDAVLENQTPEFFQDVSKPKYSGTANLDRVTREACPELDYFVIFSSVSCG-RGN----------AGQ 2031 (2512)
T ss_dssp             SCEEEEEECCCC----------------CTTTTHHHHHHHHHHHHHHCTTCCEEEEECCHHHH-TTC----------TTC
T ss_pred             CCCcEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHhcccCCEEEEecchhhc-CCC----------CCc
Confidence             58999999997432   233456667888999999999988775421234689999997652 221          223


Q ss_pred             Chh-HHHHHHHHHHHHhccCCCCeEEEEEecEEE
Q 018503          192 NDY-LAEVCREWEGTALKVNKDVRLALIRIGIVL  224 (355)
Q Consensus       192 ~~y-~~k~~~~~~~~~~~~~~~~~~~i~Rp~~i~  224 (355)
                      ..| .+|...+.+.+..+.+ |++...+..+.+-
T Consensus      2032 ~~Y~aaKaal~~l~~~rr~~-Gl~~~a~~~g~~~ 2064 (2512)
T 2vz8_A         2032 ANYGFANSAMERICEKRRHD-GLPGLAVQWGAIG 2064 (2512)
T ss_dssp             HHHHHHHHHHHHHHHHHHHT-TSCCCEEEECCBC
T ss_pred             HHHHHHHHHHHHHHHHHHHC-CCcEEEEEccCcC
Confidence            468 7787777777755543 8888888777654

>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A

Probab=98.66  E-value=4e-08  Score=90.43  Aligned_cols=108  Identities=14%  Similarity=0.216  Sum_probs=73.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcCCCcEEEECCCCCC
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTPI  128 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~~~  128 (355)
                      ++++|+|+| +|++|+++++.|++.|++|++++|+.++...+...........+|+.|.+++.++++++|+|||+++...
T Consensus         2 ~~k~VlViG-aG~iG~~ia~~L~~~G~~V~v~~R~~~~a~~la~~~~~~~~~~~Dv~d~~~l~~~l~~~DvVIn~a~~~~   80 (450)
T 1ff9_A            2 ATKSVLMLG-SGFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGVQHSTPISLDVNDDAALDAEVAKHDLVISLIPYTF   80 (450)
T ss_dssp             CCCEEEEEC-CSTTHHHHHHHHHTTTCEEEEEESSHHHHHHTTTTCTTEEEEECCTTCHHHHHHHHTTSSEEEECCC--C
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHhCcCEEEEEECCHHHHHHHHHhcCCceEEEeecCCHHHHHHHHcCCcEEEECCcccc
Confidence            347899998 8999999999999999999999998876655443211001223477777888888899999999997521


Q ss_pred             CCCCChhhHHHHHH--Hhh-------hhHHHHHHHHHcCCCCCC
Q 018503          129 GTRWSSEIKKEIKE--SRI-------RVTSKVVDLINESPEGVR  163 (355)
Q Consensus       129 ~~~~~~~~~~~~~~--~n~-------~~~~~l~~a~~~~~~~~~  163 (355)
                          ........++  .|+       ..+.++++++++  .+++
T Consensus        81 ----~~~i~~a~l~~g~~vvd~~~~~~~~~~l~~aA~~--aGv~  118 (450)
T 1ff9_A           81 ----HATVIKSAIRQKKHVVTTSYVSPAMMELDQAAKD--AGIT  118 (450)
T ss_dssp             ----HHHHHHHHHHHTCEEEESSCCCHHHHHTHHHHHH--TTCE
T ss_pred             ----chHHHHHHHhCCCeEEEeecccHHHHHHHHHHHH--CCCe
Confidence                1111122222  222       357788899988  5653

>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*

Probab=98.64  E-value=1.3e-07  Score=82.75  Aligned_cols=110  Identities=17%  Similarity=0.213  Sum_probs=76.7

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhCC--CeEEEEecCCchhh--ccCCCCCCccCCCeeecC---CcchhhhcCCCcEEEEC
Q 018503           51 MTVSVTGATGFIGRRLVQRLQADN--HQVRVLTRSRSKAE--LIFPGKKTRFFPGVMIAE---EPQWRDCIQGSTAVVNL  123 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~--~~~~~~~~~~~~~~d~~~---~~~~~~~~~~~d~vi~~  123 (355)
                      |||.|+||+|++|..++..|+..|  ++|..+++++....  .+...     ....++..   .+++.++++++|+||++
T Consensus         1 mKI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~~~~~a~dL~~~-----~~~~~l~~~~~t~d~~~a~~~aDvVvi~   75 (314)
T 1mld_A            1 AKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVAADLSHI-----ETRATVKGYLGPEQLPDCLKGCDVVVIP   75 (314)
T ss_dssp             CEEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHHHHHHTTS-----SSSCEEEEEESGGGHHHHHTTCSEEEEC
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCccHHHHHHHhcc-----CcCceEEEecCCCCHHHHhCCCCEEEEC
Confidence            689999999999999999999888  79999999873222  11111     11123333   25677789999999999


Q ss_pred             CCCCCCCCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEe
Q 018503          124 AGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVS  169 (355)
Q Consensus       124 a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~S  169 (355)
                      ++.+....   ....+....|+...+.+++.+.+.. ...+++++|
T Consensus        76 ag~~~~~g---~~r~dl~~~n~~i~~~i~~~i~~~~-p~a~viv~s  117 (314)
T 1mld_A           76 AGVPRKPG---MTRDDLFNTNATIVATLTAACAQHC-PDAMICIIS  117 (314)
T ss_dssp             CSCCCCTT---CCGGGGHHHHHHHHHHHHHHHHHHC-TTSEEEECS
T ss_pred             CCcCCCCC---CcHHHHHHHHHHHHHHHHHHHHhhC-CCeEEEEEC
Confidence            99753221   1123567899999999999888742 233566654

>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*

Probab=98.63  E-value=7.4e-08  Score=74.16  Aligned_cols=73  Identities=19%  Similarity=0.173  Sum_probs=53.8

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhh-cCCCcEEEECCC
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDC-IQGSTAVVNLAG  125 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~-~~~~d~vi~~a~  125 (355)
                      +++|+|+|+ |.+|+.+++.|.+.|++|++++|+++..........  .....|..+.+.+.++ +.++|+||++++
T Consensus         6 ~~~v~I~G~-G~iG~~~a~~l~~~g~~v~~~d~~~~~~~~~~~~~~--~~~~~d~~~~~~l~~~~~~~~d~vi~~~~   79 (144)
T 2hmt_A            6 NKQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNAYASYAT--HAVIANATEENELLSLGIRNFEYVIVAIG   79 (144)
T ss_dssp             CCSEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHTTTTTCS--EEEECCTTCHHHHHTTTGGGCSEEEECCC
T ss_pred             CCcEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhCC--EEEEeCCCCHHHHHhcCCCCCCEEEECCC
Confidence            357999997 999999999999999999999998766554333211  0122355565666655 678999999986

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*

Probab=98.62  E-value=3.9e-08  Score=85.27  Aligned_cols=78  Identities=17%  Similarity=0.185  Sum_probs=60.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCC---CccCCCeeecCCcchhhhcCCCcEEEECCC
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKK---TRFFPGVMIAEEPQWRDCIQGSTAVVNLAG  125 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~---~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~  125 (355)
                      ..++++||||+|.+|+++++.|++.|++|++++|+.++...+.....   ......+|+.+.+++.++++++|+|||+++
T Consensus       118 ~gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~~~~~~~l~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~DvlVn~ag  197 (287)
T 1lu9_A          118 KGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAETADDASRAEAVKGAHFVFTAGA  197 (287)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCSHHHHHHHTTTCSEEEECCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHhCCEEEECCC
Confidence            45799999999999999999999999999999998765433211000   001334688888899999999999999997


Q ss_pred             C
Q 018503          126 T  126 (355)
Q Consensus       126 ~  126 (355)
                      .
T Consensus       198 ~  198 (287)
T 1lu9_A          198 I  198 (287)
T ss_dssp             T
T ss_pred             c
Confidence            5

>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*

Probab=98.56  E-value=8.4e-07  Score=97.24  Aligned_cols=230  Identities=12%  Similarity=0.063  Sum_probs=131.1

Q ss_pred             CCCCEEEEEcCCch-HHHHHHHHHHhCCCeEEEEecCCch-----hhcc----CCCCCCccCCCeeecCCcchhhhc---
Q 018503           48 ASQMTVSVTGATGF-IGRRLVQRLQADNHQVRVLTRSRSK-----AELI----FPGKKTRFFPGVMIAEEPQWRDCI---  114 (355)
Q Consensus        48 ~~~~~IlVtGatG~-iG~~l~~~L~~~g~~V~~~~r~~~~-----~~~~----~~~~~~~~~~~~d~~~~~~~~~~~---  114 (355)
                      ..+++++||||++. ||.++++.|++.|.+|++++|+.+.     ....    ...........+|+.|.+++.+++   
T Consensus      2134 l~gKvaLVTGAs~GsIG~AiA~~La~~GA~Vvi~~r~~~~~~~~~~~~l~~~l~~~G~~~~~v~~Dvtd~~~v~~lv~~i 2213 (3089)
T 3zen_D         2134 XXDEVAVVTGASKGSIAASVVGQLLDGGATVIATTSRLDDDRLAFYKQLYRDHARFDATLWVVPANMASYSDIDKLVEWV 2213 (3089)
T ss_dssp             CCCCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESCCSHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCChhHHHHHHHHHHHHCCCEEEEEeCChhhhhhHHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHHH
Confidence            35678999999999 9999999999999999999998765     2221    111111113347888888776553   


Q ss_pred             --------CCCcEEEECCCCC----C----CCCCCh----hhHHHHHHHhhhhHHHHHHHHHcC--CCCC-CcEEEEeee
Q 018503          115 --------QGSTAVVNLAGTP----I----GTRWSS----EIKKEIKESRIRVTSKVVDLINES--PEGV-RPSVLVSAT  171 (355)
Q Consensus       115 --------~~~d~vi~~a~~~----~----~~~~~~----~~~~~~~~~n~~~~~~l~~a~~~~--~~~~-~~~v~~Ss~  171 (355)
                              .++|++|||||..    .    ......    ...+..+++|+.++..++.++...  ..+. .....+...
T Consensus      2214 ~~~~~~~fG~IDILVNNAGi~d~~~~~a~~~~~~~~e~~~~~~e~~~~vnl~~~~~l~~~~~~~m~~~~~g~~~~ii~~~ 2293 (3089)
T 3zen_D         2214 GTEQTESLGPQSIHLKDAQTPTLLFPFAAPRVAGDMSEVGSRAEMEMKVLLWAVQRLISGLSKIGAERDIASRLHVVLPG 2293 (3089)
T ss_dssp             TSCCEEEESSSEEEECCCCCCSEEEECCCCCCCCTTSCTTSHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCCEEEEEEE
T ss_pred             HhhhhhhcCCCCEEEECCCcccccCcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCceeEEEEEC
Confidence                    2589999999971    0    001011    123445788888888777765431  0121 111111111


Q ss_pred             eeeeeCCCCCccccCCCCCCChh-HHHHHHHHHHHHhccC----CCCeEEEEEecEEEeCCCC-cccchHHHHHHHhCCC
Q 018503          172 ALGYYGTSETEVFDESSPSGNDY-LAEVCREWEGTALKVN----KDVRLALIRIGIVLGKDGG-ALAKMIPLFMMFAGGP  245 (355)
Q Consensus       172 ~~~~yg~~~~~~~~e~~~~~~~y-~~k~~~~~~~~~~~~~----~~~~~~i~Rp~~i~G~~~~-~~~~~~~~~~~~~~~~  245 (355)
                      +.. .+.         .+....| .+|.....+...+..+    .++.++.+.||++-+.... .........   ....
T Consensus      2294 ss~-~g~---------~g~~~aYsASKaAl~~LtrslA~E~~~a~~IrVn~v~PG~v~tT~l~~~~~~~~~~~---~~~~ 2360 (3089)
T 3zen_D         2294 SPN-RGM---------FGGDGAYGEAKSALDALENRWSAEKSWAERVSLAHALIGWTKGTGLMGQNDAIVSAV---EEAG 2360 (3089)
T ss_dssp             CSS-TTS---------CSSCSSHHHHGGGHHHHHHHHHHCSTTTTTEEEEEEECCCEECSTTTTTTTTTHHHH---GGGS
T ss_pred             Ccc-ccc---------CCCchHHHHHHHHHHHHHHHHHhccccCCCeEEEEEeecccCCCcccccchhHHHHH---HhcC
Confidence            110 110         0112358 7787666665555544    3588889999998754321 111111111   1101


Q ss_pred             CCCCCcceecccHHHHHHHHHHHHhCCC---CC-C--ceEecCCC---ccCHHHHHHHHHH
Q 018503          246 LGSGQQWFSWIHLDDIVNLIYEALSNPS---YR-G--VINGTAPN---PVRLAEMCDHLGN  297 (355)
Q Consensus       246 ~~~~~~~~~~i~v~Dva~~~~~~~~~~~---~~-~--~~~i~~~~---~~s~~el~~~i~~  297 (355)
                             ......+|+|.+++.++....   .. .  ...+.+|-   ...+.++...+.+
T Consensus      2361 -------~r~~~PeEIA~avlfLaS~~a~~~~~~~p~~vdl~GG~~~~~~~~~~~~~~~~~ 2414 (3089)
T 3zen_D         2361 -------VTTYTTDEMAAMLLDLCTVETKVAAAGAPVKVDLTGGLGDIKIDMAELAAKARE 2414 (3089)
T ss_dssp             -------CBCEEHHHHHHHHHHTTSHHHHHHHHHSCEEEECSBSCSSCCCCHHHHTHHHHH
T ss_pred             -------CCCCCHHHHHHHHHHHhChhhhhHhcCCeEEEEcCCCcCcCCCCHHHHHHHHHH
Confidence                   112378999999999887432   11 1  23344543   3578877776543

>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}

Probab=98.51  E-value=1.3e-07  Score=84.92  Aligned_cols=73  Identities=18%  Similarity=0.136  Sum_probs=59.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcCCCcEEEECCCC
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT  126 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~  126 (355)
                      .+|||+|+|| |++|+.+++.|.+ .++|++.+|+.++.........   ...+|+.|.+++.++++++|+||++++.
T Consensus        15 ~~mkilvlGa-G~vG~~~~~~L~~-~~~v~~~~~~~~~~~~~~~~~~---~~~~d~~d~~~l~~~~~~~DvVi~~~p~   87 (365)
T 3abi_A           15 RHMKVLILGA-GNIGRAIAWDLKD-EFDVYIGDVNNENLEKVKEFAT---PLKVDASNFDKLVEVMKEFELVIGALPG   87 (365)
T ss_dssp             -CCEEEEECC-SHHHHHHHHHHTT-TSEEEEEESCHHHHHHHTTTSE---EEECCTTCHHHHHHHHTTCSEEEECCCG
T ss_pred             CccEEEEECC-CHHHHHHHHHHhc-CCCeEEEEcCHHHHHHHhccCC---cEEEecCCHHHHHHHHhCCCEEEEecCC
Confidence            3579999998 9999999998865 6899999999877666544322   3457888999999999999999999863

>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}

Probab=98.51  E-value=2e-07  Score=71.63  Aligned_cols=73  Identities=23%  Similarity=0.231  Sum_probs=55.3

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhh-cCCCcEEEECCC
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDC-IQGSTAVVNLAG  125 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~-~~~~d~vi~~a~  125 (355)
                      +++|+|+|+ |++|+++++.|.+.|++|++++++++..........  .....|..+++.+.++ +.++|+||.+.+
T Consensus         6 ~~~v~I~G~-G~iG~~la~~L~~~g~~V~~id~~~~~~~~~~~~~~--~~~~gd~~~~~~l~~~~~~~~d~vi~~~~   79 (141)
T 3llv_A            6 RYEYIVIGS-EAAGVGLVRELTAAGKKVLAVDKSKEKIELLEDEGF--DAVIADPTDESFYRSLDLEGVSAVLITGS   79 (141)
T ss_dssp             CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTTC--EEEECCTTCHHHHHHSCCTTCSEEEECCS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHCCC--cEEECCCCCHHHHHhCCcccCCEEEEecC
Confidence            468999996 999999999999999999999999876554332211  1233577777777765 468999998865

>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}

Probab=98.49  E-value=3.1e-07  Score=75.74  Aligned_cols=71  Identities=20%  Similarity=0.306  Sum_probs=52.1

Q ss_pred             CCCEEEEEcC----------------CchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchh-
Q 018503           49 SQMTVSVTGA----------------TGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWR-  111 (355)
Q Consensus        49 ~~~~IlVtGa----------------tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~-  111 (355)
                      .+|+||||||                ||.+|.++++.|+++|++|+.++|....... .       ...+++.+.++.. 
T Consensus         2 ~gk~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~~Ga~V~lv~~~~~~~~~-~-------~~~~~~~~v~s~~e   73 (232)
T 2gk4_A            2 NAMKILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLSAGYEVCLITTKRALKPE-P-------HPNLSIREITNTKD   73 (232)
T ss_dssp             -CCEEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHHHTTCEEEEEECTTSCCCC-C-------CTTEEEEECCSHHH
T ss_pred             CCCEEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHHHCCCEEEEEeCCcccccc-C-------CCCeEEEEHhHHHH
Confidence            3589999999                9999999999999999999999997642110 0       1235555544433 


Q ss_pred             ------hhcCCCcEEEECCCCC
Q 018503          112 ------DCIQGSTAVVNLAGTP  127 (355)
Q Consensus       112 ------~~~~~~d~vi~~a~~~  127 (355)
                            +.+.++|++||+||..
T Consensus        74 m~~~v~~~~~~~Dili~aAAvs   95 (232)
T 2gk4_A           74 LLIEMQERVQDYQVLIHSMAVS   95 (232)
T ss_dssp             HHHHHHHHGGGCSEEEECSBCC
T ss_pred             HHHHHHHhcCCCCEEEEcCccc
Confidence                  3335799999999964

>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*

Probab=98.48  E-value=1.9e-07  Score=82.05  Aligned_cols=112  Identities=11%  Similarity=0.099  Sum_probs=75.2

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCC--e-----EEEEecCCc--hh----hccCCCCCCccCCCeeecCCcchhhhcCC
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNH--Q-----VRVLTRSRS--KA----ELIFPGKKTRFFPGVMIAEEPQWRDCIQG  116 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~--~-----V~~~~r~~~--~~----~~~~~~~~~~~~~~~d~~~~~~~~~~~~~  116 (355)
                      +|||+||||+|++|++++..|+..|.  +     +..+++...  ..    ..+.....  .+. -++...+...+.+++
T Consensus         3 ~~kV~V~GaaG~VG~~la~~L~~~~~~~e~~~~~l~L~Di~~~~~~~~g~a~DL~~~~~--~~~-~~~~~~~~~~~~~~d   79 (333)
T 5mdh_A            3 PIRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCAL--PLL-KDVIATDKEEIAFKD   79 (333)
T ss_dssp             CEEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCC--TTE-EEEEEESCHHHHTTT
T ss_pred             CeEEEEECCCCHHHHHHHHHHHhCCCccccCCCEEEEEeCCCccccchhhHhhhHhhhh--ccc-CCEEEcCCcHHHhCC
Confidence            47999999999999999999998764  5     888888642  11    11111000  011 133334456677899


Q ss_pred             CcEEEECCCCCCCCCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCC--cEEEEe
Q 018503          117 STAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVR--PSVLVS  169 (355)
Q Consensus       117 ~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~--~~v~~S  169 (355)
                      +|+||++||.+...   .....+.++.|+..++.+++++.+  .+.+  +++.+|
T Consensus        80 aDvVvitAg~prkp---G~tR~dll~~N~~i~~~i~~~i~~--~~~~~~~vivvs  129 (333)
T 5mdh_A           80 LDVAILVGSMPRRD---GMERKDLLKANVKIFKCQGAALDK--YAKKSVKVIVVG  129 (333)
T ss_dssp             CSEEEECCSCCCCT---TCCTTTTHHHHHHHHHHHHHHHHH--HSCTTCEEEECS
T ss_pred             CCEEEEeCCCCCCC---CCCHHHHHHHHHHHHHHHHHHHHH--hCCCCeEEEEcC
Confidence            99999999875221   223346788999999999999988  3433  455554

>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}

Probab=98.46  E-value=1.7e-07  Score=82.51  Aligned_cols=103  Identities=14%  Similarity=0.240  Sum_probs=71.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCC--CeEEEEecCCchhhc----cCCCCCCccCCCeeecCCcchhhhcCCCcEEEE
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADN--HQVRVLTRSRSKAEL----IFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVN  122 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~----~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~  122 (355)
                      .+|||.|+|++|++|+.++..|+..|  .+|..++.+.++...    +... .   +...++.-..+..++++++|+||.
T Consensus         7 ~~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~~k~~g~a~DL~~~-~---~~~~~i~~t~d~~~al~dADvVvi   82 (343)
T 3fi9_A            7 TEEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFAVGLEGVAEEIRHC-G---FEGLNLTFTSDIKEALTDAKYIVS   82 (343)
T ss_dssp             CSSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCHHHHHHHHHHHHHH-C---CTTCCCEEESCHHHHHTTEEEEEE
T ss_pred             CCCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCchhHHHHHHhhhhC-c---CCCCceEEcCCHHHHhCCCCEEEE
Confidence            45799999999999999999999988  589999997654321    1110 0   111222223456677899999999


Q ss_pred             CCCCCCCCCCChhhHHHHHHHhhhhHHHHHHHHHcC
Q 018503          123 LAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINES  158 (355)
Q Consensus       123 ~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~  158 (355)
                      +||.+..   ....-.+.+..|+...+.+.+.+.+.
T Consensus        83 taG~p~k---pG~~R~dLl~~N~~I~~~i~~~i~~~  115 (343)
T 3fi9_A           83 SGGAPRK---EGMTREDLLKGNAEIAAQLGKDIKSY  115 (343)
T ss_dssp             CCC----------CHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccCCCCC---CCCCHHHHHHHHHHHHHHHHHHHHHh
Confidence            9986422   22234577889999999999999884

>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9

Probab=98.46  E-value=4.3e-07  Score=69.46  Aligned_cols=74  Identities=14%  Similarity=0.240  Sum_probs=51.3

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhh-cCCCcEEEECCC
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDC-IQGSTAVVNLAG  125 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~-~~~~d~vi~~a~  125 (355)
                      .|+|+|+|+ |++|+.+++.|.+.|++|++++|+++....+...... .....|..+.+.+.+. ++++|+||++.+
T Consensus         4 ~m~i~IiG~-G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~~~~-~~~~~d~~~~~~l~~~~~~~~d~vi~~~~   78 (140)
T 1lss_A            4 GMYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEIDA-LVINGDCTKIKTLEDAGIEDADMYIAVTG   78 (140)
T ss_dssp             -CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCSS-EEEESCTTSHHHHHHTTTTTCSEEEECCS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHhcCc-EEEEcCCCCHHHHHHcCcccCCEEEEeeC
Confidence            379999986 9999999999999999999999987655433211000 0112244455555443 578999999974

>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*

Probab=98.37  E-value=3.1e-06  Score=66.04  Aligned_cols=76  Identities=16%  Similarity=0.205  Sum_probs=53.9

Q ss_pred             cCCCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccC-CCCCCccCCCeeecCCcchhhh-cCCCcEEEECC
Q 018503           47 KASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIF-PGKKTRFFPGVMIAEEPQWRDC-IQGSTAVVNLA  124 (355)
Q Consensus        47 ~~~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~d~~~~~~~~~~-~~~~d~vi~~a  124 (355)
                      ....++|+|+|+ |.+|+.+++.|.+.|++|++++|+++...... ....  .....|..+.+.+.++ +.++|+||.+.
T Consensus        16 ~~~~~~v~IiG~-G~iG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~g~--~~~~~d~~~~~~l~~~~~~~ad~Vi~~~   92 (155)
T 2g1u_A           16 KQKSKYIVIFGC-GRLGSLIANLASSSGHSVVVVDKNEYAFHRLNSEFSG--FTVVGDAAEFETLKECGMEKADMVFAFT   92 (155)
T ss_dssp             -CCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGGGGSCTTCCS--EEEESCTTSHHHHHTTTGGGCSEEEECS
T ss_pred             ccCCCcEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHhcCCC--cEEEecCCCHHHHHHcCcccCCEEEEEe
Confidence            344579999995 99999999999999999999999987765544 2211  0111233444455554 56899999997


Q ss_pred             C
Q 018503          125 G  125 (355)
Q Consensus       125 ~  125 (355)
                      +
T Consensus        93 ~   93 (155)
T 2g1u_A           93 N   93 (155)
T ss_dssp             S
T ss_pred             C
Confidence            5

>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*

Probab=98.30  E-value=1.6e-06  Score=71.24  Aligned_cols=72  Identities=13%  Similarity=0.188  Sum_probs=50.9

Q ss_pred             CCCEEEEEcC----------------CchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhh
Q 018503           49 SQMTVSVTGA----------------TGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRD  112 (355)
Q Consensus        49 ~~~~IlVtGa----------------tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~  112 (355)
                      .+++||||||                ||.+|.++++.|.+.|++|+.+++...- . . ...    ...+|+.+.+++.+
T Consensus         7 ~gk~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~Ga~V~l~~~~~~l-~-~-~~g----~~~~dv~~~~~~~~   79 (226)
T 1u7z_A            7 KHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVSL-P-T-PPF----VKRVDVMTALEMEA   79 (226)
T ss_dssp             TTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCCC-C-C-CTT----EEEEECCSHHHHHH
T ss_pred             CCCEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHCCCEEEEEECCccc-c-c-CCC----CeEEccCcHHHHHH
Confidence            4579999999                7999999999999999999999886521 1 0 110    12244444443322


Q ss_pred             ----hcCCCcEEEECCCCC
Q 018503          113 ----CIQGSTAVVNLAGTP  127 (355)
Q Consensus       113 ----~~~~~d~vi~~a~~~  127 (355)
                          .+.++|++||+||..
T Consensus        80 ~v~~~~~~~Dili~~Aav~   98 (226)
T 1u7z_A           80 AVNASVQQQNIFIGCAAVA   98 (226)
T ss_dssp             HHHHHGGGCSEEEECCBCC
T ss_pred             HHHHhcCCCCEEEECCccc
Confidence                235799999999974

>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}

Probab=98.19  E-value=3.3e-07  Score=83.31  Aligned_cols=75  Identities=20%  Similarity=0.196  Sum_probs=57.3

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhCC---CeEEEEecCCchhhccCCCCC-----CccCCCeeecCCcchhhhcCC--CcEE
Q 018503           51 MTVSVTGATGFIGRRLVQRLQADN---HQVRVLTRSRSKAELIFPGKK-----TRFFPGVMIAEEPQWRDCIQG--STAV  120 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~g---~~V~~~~r~~~~~~~~~~~~~-----~~~~~~~d~~~~~~~~~~~~~--~d~v  120 (355)
                      |+|+|+|| |++|+.+++.|++.|   .+|++.+|+.++...+.....     ......+|+.|.+++.+++++  +|+|
T Consensus         2 ~kVlIiGa-GgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~~~~~~~~~~D~~d~~~l~~~l~~~~~DvV   80 (405)
T 4ina_A            2 AKVLQIGA-GGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKGYGEIDITTVDADSIEELVALINEVKPQIV   80 (405)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHTTCCCCEEEECCTTCHHHHHHHHHHHCCSEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhhcCCceEEEEecCCCHHHHHHHHHhhCCCEE
Confidence            68999998 999999999999998   399999999876544321100     001334688888899998876  9999


Q ss_pred             EECCCC
Q 018503          121 VNLAGT  126 (355)
Q Consensus       121 i~~a~~  126 (355)
                      ||+++.
T Consensus        81 in~ag~   86 (405)
T 4ina_A           81 LNIALP   86 (405)
T ss_dssp             EECSCG
T ss_pred             EECCCc
Confidence            999874

>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9

Probab=98.18  E-value=2.7e-06  Score=66.21  Aligned_cols=73  Identities=12%  Similarity=0.133  Sum_probs=53.4

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCC-chh---hccCCCCCCccCCCeeecCCcchhhh-cCCCcEEEECC
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSR-SKA---ELIFPGKKTRFFPGVMIAEEPQWRDC-IQGSTAVVNLA  124 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~-~~~---~~~~~~~~~~~~~~~d~~~~~~~~~~-~~~~d~vi~~a  124 (355)
                      .++|+|+|+ |.+|+++++.|.+.|++|+++++++ +..   ........  .....|..+++.+.++ ++++|+||.+.
T Consensus         3 ~~~vlI~G~-G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~~~~~--~~i~gd~~~~~~l~~a~i~~ad~vi~~~   79 (153)
T 1id1_A            3 KDHFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGDNA--DVIPGDSNDSSVLKKAGIDRCRAILALS   79 (153)
T ss_dssp             CSCEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHCTTC--EEEESCTTSHHHHHHHTTTTCSEEEECS
T ss_pred             CCcEEEECC-CHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhhcCCC--eEEEcCCCCHHHHHHcChhhCCEEEEec
Confidence            468999995 9999999999999999999999975 221   11111110  0233577788888776 78999999886


Q ss_pred             C
Q 018503          125 G  125 (355)
Q Consensus       125 ~  125 (355)
                      +
T Consensus        80 ~   80 (153)
T 1id1_A           80 D   80 (153)
T ss_dssp             S
T ss_pred             C
Confidence            5

>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}

Probab=98.15  E-value=7.5e-07  Score=82.10  Aligned_cols=76  Identities=16%  Similarity=0.265  Sum_probs=57.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhC-CCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcCCCcEEEECCCC
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQAD-NHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT  126 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~  126 (355)
                      ++++|+|+|+ |++|+++++.|++. |++|++++|+.++...+..... .....+|+.|.+++.++++++|+|||+++.
T Consensus        22 ~~k~VlIiGA-GgiG~aia~~L~~~~g~~V~v~~R~~~ka~~la~~~~-~~~~~~D~~d~~~l~~~l~~~DvVIn~tp~   98 (467)
T 2axq_A           22 MGKNVLLLGS-GFVAQPVIDTLAANDDINVTVACRTLANAQALAKPSG-SKAISLDVTDDSALDKVLADNDVVISLIPY   98 (467)
T ss_dssp             -CEEEEEECC-STTHHHHHHHHHTSTTEEEEEEESSHHHHHHHHGGGT-CEEEECCTTCHHHHHHHHHTSSEEEECSCG
T ss_pred             CCCEEEEECC-hHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhcC-CcEEEEecCCHHHHHHHHcCCCEEEECCch
Confidence            3468999997 99999999999998 7899999998776554322100 002235777777888888899999999875

>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*

Probab=98.13  E-value=1.1e-06  Score=72.55  Aligned_cols=73  Identities=25%  Similarity=0.264  Sum_probs=51.8

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcCCCcEEEECCC
Q 018503           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG  125 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~  125 (355)
                      |||+|+||+|++|+++++.|++.|++|++++|+++....+...... .....++. .+++.++++++|+||++..
T Consensus         1 m~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~D~Vi~~~~   73 (212)
T 1jay_A            1 MRVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRR-IAGDASIT-GMKNEDAAEACDIAVLTIP   73 (212)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHHHHH-HHSSCCEE-EEEHHHHHHHCSEEEECSC
T ss_pred             CeEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcc-ccccCCCC-hhhHHHHHhcCCEEEEeCC
Confidence            6899999999999999999999999999999987654432211000 00001232 3466677788999999974

>2nqt_A N-acetyl-gamma-glutamyl-phosphate reductase; apoprotein, dimer, rossmann fold, structural genomics, PSI, protein structure initiative; 1.58A {Mycobacterium tuberculosis} PDB: 2i3a_A* 2i3g_A

Probab=98.13  E-value=5.2e-06  Score=73.45  Aligned_cols=96  Identities=16%  Similarity=0.195  Sum_probs=59.2

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCC-----C-eEEEEecCCchhhccC---CCCCCccCCCeeecCCcchhhhcCCCcEE
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADN-----H-QVRVLTRSRSKAELIF---PGKKTRFFPGVMIAEEPQWRDCIQGSTAV  120 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g-----~-~V~~~~r~~~~~~~~~---~~~~~~~~~~~d~~~~~~~~~~~~~~d~v  120 (355)
                      +|||+|.||||++|+.|++.|.+++     + +|+++.+..+......   ....  ....+++.+.+  .+.+.++|+|
T Consensus         9 m~kVaIvGATG~vG~~llr~L~~~~~~~~~~~ei~~l~s~~~agk~~~~~~~~l~--~~~~~~~~~~~--~~~~~~~DvV   84 (352)
T 2nqt_A            9 ATKVAVAGASGYAGGEILRLLLGHPAYADGRLRIGALTAATSAGSTLGEHHPHLT--PLAHRVVEPTE--AAVLGGHDAV   84 (352)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHTCHHHHTTSEEEEEEEESSCTTSBGGGTCTTCG--GGTTCBCEECC--HHHHTTCSEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHcCCCCCCccEEEEEEECCCcCCCchhhhccccc--ccceeeeccCC--HHHhcCCCEE
Confidence            4799999999999999999999987     4 7888765433222111   1100  00122333322  2335689999


Q ss_pred             EECCCCCCCCCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeee
Q 018503          121 VNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATA  172 (355)
Q Consensus       121 i~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~  172 (355)
                      |.|++...                   +..++..+ +  .+. ++|-+|+..
T Consensus        85 f~alg~~~-------------------s~~~~~~~-~--~G~-~vIDlSa~~  113 (352)
T 2nqt_A           85 FLALPHGH-------------------SAVLAQQL-S--PET-LIIDCGADF  113 (352)
T ss_dssp             EECCTTSC-------------------CHHHHHHS-C--TTS-EEEECSSTT
T ss_pred             EECCCCcc-------------------hHHHHHHH-h--CCC-EEEEECCCc
Confidence            99987421                   22455666 6  564 688888765

>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*

Probab=98.11  E-value=8.3e-06  Score=71.19  Aligned_cols=114  Identities=13%  Similarity=0.158  Sum_probs=71.1

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCC-eEEEEecCCchhhccCCCCCCc---cCCCeeecCCcchhhhcCCCcEEEECCC
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRSKAELIFPGKKTR---FFPGVMIAEEPQWRDCIQGSTAVVNLAG  125 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~---~~~~~d~~~~~~~~~~~~~~d~vi~~a~  125 (355)
                      +|||.|+|| |.+|..++..|+..|+ +|..++++.++...........   ......+....+. +.++++|+||.+++
T Consensus         2 ~~kI~VIGa-G~vG~~~a~~la~~g~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t~d~-~a~~~aD~Vi~a~g   79 (309)
T 1ur5_A            2 RKKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGTNNY-ADTANSDVIVVTSG   79 (309)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESCG-GGGTTCSEEEECCC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCCccHHHHHHHhHHHhHhhcCCCeEEEECCCH-HHHCCCCEEEEcCC
Confidence            479999998 9999999999999997 9999998875443211000000   0011222222334 56889999999998


Q ss_pred             CCCCCCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEee
Q 018503          126 TPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSA  170 (355)
Q Consensus       126 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss  170 (355)
                      .+...   .....+....|....+.+.+.+.+  .....++.+.|
T Consensus        80 ~p~~~---g~~r~dl~~~n~~i~~~i~~~i~~--~~p~a~vi~~t  119 (309)
T 1ur5_A           80 APRKP---GMSREDLIKVNADITRACISQAAP--LSPNAVIIMVN  119 (309)
T ss_dssp             C-----------CHHHHHHHHHHHHHHHHHGG--GCTTCEEEECC
T ss_pred             CCCCC---CCCHHHHHHHHHHHHHHHHHHHHh--hCCCeEEEEcC
Confidence            64221   111235567888888899999888  33444554443

>2hjs_A USG-1 protein homolog; aspartate-semialdehyde dehydrogenase, probable hydrolase, PS aeruginosa, structurual genomics; 2.20A {Pseudomonas aeruginosa} SCOP: c.2.1.3 d.81.1.1

Probab=98.07  E-value=1.1e-05  Score=71.30  Aligned_cols=95  Identities=17%  Similarity=0.184  Sum_probs=55.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCC---eEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcCCCcEEEECCC
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNH---QVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG  125 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~  125 (355)
                      |+|||+|.||+|++|+.+++.|.+++|   +++++....+........     ...+.+.+.+ . +.++++|+||.+.+
T Consensus         5 m~~kV~IiGAtG~iG~~llr~L~~~~~~~~elv~i~s~~~~g~~~~~~-----g~~i~~~~~~-~-~~~~~~DvV~~a~g   77 (340)
T 2hjs_A            5 QPLNVAVVGATGSVGEALVGLLDERDFPLHRLHLLASAESAGQRMGFA-----ESSLRVGDVD-S-FDFSSVGLAFFAAA   77 (340)
T ss_dssp             CCCCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECTTTTTCEEEET-----TEEEECEEGG-G-CCGGGCSEEEECSC
T ss_pred             CCcEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEEecCCCCCCccccC-----CcceEEecCC-H-HHhcCCCEEEEcCC
Confidence            457999999999999999999997654   566654322111111000     0112222221 1 12468999999986


Q ss_pred             CCCCCCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeee
Q 018503          126 TPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATA  172 (355)
Q Consensus       126 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~  172 (355)
                      ..                   .+..++..+.+  .+.+ +|.+|+.+
T Consensus        78 ~~-------------------~s~~~a~~~~~--aG~k-vId~Sa~~  102 (340)
T 2hjs_A           78 AE-------------------VSRAHAERARA--AGCS-VIDLSGAL  102 (340)
T ss_dssp             HH-------------------HHHHHHHHHHH--TTCE-EEETTCTT
T ss_pred             cH-------------------HHHHHHHHHHH--CCCE-EEEeCCCC
Confidence            21                   12345556666  5664 67777653

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1

Probab=98.06  E-value=3.2e-06  Score=68.84  Aligned_cols=74  Identities=16%  Similarity=-0.003  Sum_probs=52.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchh---hhc--CCCcEEEEC
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWR---DCI--QGSTAVVNL  123 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~---~~~--~~~d~vi~~  123 (355)
                      ..++|+|+||+|.+|..+++.+...|++|++++|+++..........   ...+|..+.+...   +..  .++|+||++
T Consensus        38 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~~~g~---~~~~d~~~~~~~~~~~~~~~~~~~D~vi~~  114 (198)
T 1pqw_A           38 PGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLSRLGV---EYVGDSRSVDFADEILELTDGYGVDVVLNS  114 (198)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHTTCC---SEEEETTCSTHHHHHHHHTTTCCEEEEEEC
T ss_pred             CCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCC---CEEeeCCcHHHHHHHHHHhCCCCCeEEEEC
Confidence            35789999999999999999999999999999998765443322211   1124554544333   223  258999999


Q ss_pred             CC
Q 018503          124 AG  125 (355)
Q Consensus       124 a~  125 (355)
                      +|
T Consensus       115 ~g  116 (198)
T 1pqw_A          115 LA  116 (198)
T ss_dssp             CC
T ss_pred             Cc
Confidence            86

>2ozp_A N-acetyl-gamma-glutamyl-phosphate reductase; amino acid biosynthesis, structural genomics, riken structur genomics/proteomics initiative; 2.01A {Thermus thermophilus}

Probab=98.05  E-value=1.9e-05  Score=69.79  Aligned_cols=95  Identities=17%  Similarity=0.174  Sum_probs=58.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCC-CeEEEEecCCchhhccCCCCCCccC---CCeeecCCcchhhhcCCCcEEEECC
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADN-HQVRVLTRSRSKAELIFPGKKTRFF---PGVMIAEEPQWRDCIQGSTAVVNLA  124 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~---~~~d~~~~~~~~~~~~~~d~vi~~a  124 (355)
                      ++|||.|.||+|++|+.+++.|.+++ .+++++.+..+..........  .+   ..+.+.+.+   + +.++|+||.++
T Consensus         3 ~~~kV~IiGAtG~iG~~llr~L~~~p~~elv~v~s~~~~g~~~~~~~~--~~~g~~~~~~~~~~---~-~~~vDvV~~a~   76 (345)
T 2ozp_A            3 GKKTLSIVGASGYAGGEFLRLALSHPYLEVKQVTSRRFAGEPVHFVHP--NLRGRTNLKFVPPE---K-LEPADILVLAL   76 (345)
T ss_dssp             -CEEEEEETTTSHHHHHHHHHHHTCTTEEEEEEBCSTTTTSBGGGTCG--GGTTTCCCBCBCGG---G-CCCCSEEEECC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHcCCCcEEEEEECchhhCchhHHhCc--hhcCcccccccchh---H-hcCCCEEEEcC
Confidence            35799999999999999999999875 488888775433322211100  01   112222322   3 47899999998


Q ss_pred             CCCCCCCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeee
Q 018503          125 GTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSAT  171 (355)
Q Consensus       125 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~  171 (355)
                      +..                   ....++..+.+  .|. ++|-+|+.
T Consensus        77 g~~-------------------~s~~~a~~~~~--aG~-~VId~Sa~  101 (345)
T 2ozp_A           77 PHG-------------------VFAREFDRYSA--LAP-VLVDLSAD  101 (345)
T ss_dssp             CTT-------------------HHHHTHHHHHT--TCS-EEEECSST
T ss_pred             CcH-------------------HHHHHHHHHHH--CCC-EEEEcCcc
Confidence            742                   12234455555  465 57777775

>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}

Probab=98.02  E-value=1.4e-05  Score=64.15  Aligned_cols=74  Identities=14%  Similarity=0.068  Sum_probs=55.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhC-CCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhh--cCCCcEEEECCC
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQAD-NHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDC--IQGSTAVVNLAG  125 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~--~~~~d~vi~~a~  125 (355)
                      ..++|+|+| .|.+|+.+++.|.+. |++|++++++++..........  .....|..+.+.+.++  +.++|+||.+.+
T Consensus        38 ~~~~v~IiG-~G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~~~~g~--~~~~gd~~~~~~l~~~~~~~~ad~vi~~~~  114 (183)
T 3c85_A           38 GHAQVLILG-MGRIGTGAYDELRARYGKISLGIEIREEAAQQHRSEGR--NVISGDATDPDFWERILDTGHVKLVLLAMP  114 (183)
T ss_dssp             TTCSEEEEC-CSHHHHHHHHHHHHHHCSCEEEEESCHHHHHHHHHTTC--CEEECCTTCHHHHHTBCSCCCCCEEEECCS
T ss_pred             CCCcEEEEC-CCHHHHHHHHHHHhccCCeEEEEECCHHHHHHHHHCCC--CEEEcCCCCHHHHHhccCCCCCCEEEEeCC
Confidence            356899999 699999999999999 9999999999876554332211  0112355566667776  778999998864

>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*

Probab=98.00  E-value=3.3e-05  Score=67.59  Aligned_cols=101  Identities=22%  Similarity=0.261  Sum_probs=70.3

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCC--eEEEEecCCchhhc----cCCCCCCccC-CCeeecCCcchhhhcCCCcEEEE
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNH--QVRVLTRSRSKAEL----IFPGKKTRFF-PGVMIAEEPQWRDCIQGSTAVVN  122 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~----~~~~~~~~~~-~~~d~~~~~~~~~~~~~~d~vi~  122 (355)
                      .|||.|+|+ |++|..++..|+..|+  +|+.++++.++...    +.....  .. ..+.+.. +. .+.++++|+||.
T Consensus         5 ~~kI~ViGa-G~vG~~~a~~l~~~~~~~~l~l~D~~~~k~~g~a~DL~~~~~--~~~~~v~i~~-~~-~~a~~~aDvVvi   79 (326)
T 3pqe_A            5 VNKVALIGA-GFVGSSYAFALINQGITDELVVIDVNKEKAMGDVMDLNHGKA--FAPQPVKTSY-GT-YEDCKDADIVCI   79 (326)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHTGG--GSSSCCEEEE-EC-GGGGTTCSEEEE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHHHHHhccc--cccCCeEEEe-Cc-HHHhCCCCEEEE
Confidence            479999995 9999999999999886  99999997654332    111100  01 1223331 12 256889999999


Q ss_pred             CCCCCCCCCCChhhHHHHHHHhhhhHHHHHHHHHcC
Q 018503          123 LAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINES  158 (355)
Q Consensus       123 ~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~  158 (355)
                      ++|.+..   ....-.+.+..|....+.+.+.+.+.
T Consensus        80 ~ag~p~k---pG~~R~dL~~~N~~Iv~~i~~~I~~~  112 (326)
T 3pqe_A           80 CAGANQK---PGETRLELVEKNLKIFKGIVSEVMAS  112 (326)
T ss_dssp             CCSCCCC---TTCCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             ecccCCC---CCccHHHHHHHHHHHHHHHHHHHHHh
Confidence            9986422   22234577889999999999999884

>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}

Probab=97.99  E-value=3.5e-05  Score=67.79  Aligned_cols=115  Identities=21%  Similarity=0.218  Sum_probs=74.3

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHhCCC-------eEEEEecCCchh--h----ccCCCCCCccCC-CeeecCCcchhhh
Q 018503           48 ASQMTVSVTGATGFIGRRLVQRLQADNH-------QVRVLTRSRSKA--E----LIFPGKKTRFFP-GVMIAEEPQWRDC  113 (355)
Q Consensus        48 ~~~~~IlVtGatG~iG~~l~~~L~~~g~-------~V~~~~r~~~~~--~----~~~~~~~~~~~~-~~d~~~~~~~~~~  113 (355)
                      ++..||.|+||+|.||++|+-.|.....       ++..++..+...  +    .+... .   ++ .....-.....++
T Consensus        22 ~~~vKVaViGAaG~IG~~la~~la~~~l~~~~~~~eL~L~Di~~~~~~~~Gva~DL~~~-~---~~~~~~~~~~~~~~~a   97 (345)
T 4h7p_A           22 MSAVKVAVTGAAGQIGYALVPLIARGALLGPTTPVELRLLDIEPALKALAGVEAELEDC-A---FPLLDKVVVTADPRVA   97 (345)
T ss_dssp             CCCEEEEEESTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHT-T---CTTEEEEEEESCHHHH
T ss_pred             CCCCEEEEECcCcHHHHHHHHHHHhccccCCCCccEEEEECCCCccccchhhhhhhhhc-C---ccCCCcEEEcCChHHH
Confidence            3345999999999999999998887532       788888765321  1    11110 0   11 1122223345677


Q ss_pred             cCCCcEEEECCCCCCCCCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEe
Q 018503          114 IQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVS  169 (355)
Q Consensus       114 ~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~S  169 (355)
                      ++++|+||-+||.+..   ....-.++++.|..-.+.+.+++.+.+.....++.+|
T Consensus        98 ~~~advVvi~aG~prk---pGmtR~DLl~~Na~I~~~~~~~i~~~a~~~~~vlvvs  150 (345)
T 4h7p_A           98 FDGVAIAIMCGAFPRK---AGMERKDLLEMNARIFKEQGEAIAAVAASDCRVVVVG  150 (345)
T ss_dssp             TTTCSEEEECCCCCCC---TTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECS
T ss_pred             hCCCCEEEECCCCCCC---CCCCHHHHHHHhHHHHHHHHHHHHhhccCceEEEEeC
Confidence            8999999999997533   2333468889999999999999876312222344444

>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*

Probab=97.96  E-value=2e-05  Score=68.89  Aligned_cols=102  Identities=17%  Similarity=0.225  Sum_probs=61.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCC--eEEEEecCCchhhc----cCCCCCCccCCCeeecCCcchhhhcCCCcEEEE
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNH--QVRVLTRSRSKAEL----IFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVN  122 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~----~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~  122 (355)
                      .+|||.|+|+ |.+|+.++..|+..|.  +|..++++.+....    +.....  ....+.+...  -.+.++++|+||.
T Consensus         8 ~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~--~~~~~~i~~~--~~~a~~~aDiVvi   82 (326)
T 3vku_A            8 DHQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLEDALP--FTSPKKIYSA--EYSDAKDADLVVI   82 (326)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGG--GSCCCEEEEC--CGGGGTTCSEEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHhhHhhhhh--hcCCcEEEEC--cHHHhcCCCEEEE
Confidence            3479999995 9999999999999886  89999997654331    111100  0112233221  2356889999999


Q ss_pred             CCCCCCCCCCChhhHHHHHHHhhhhHHHHHHHHHcC
Q 018503          123 LAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINES  158 (355)
Q Consensus       123 ~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~  158 (355)
                      +||.+..   ....-.+.++.|+...+.+.+.+.+.
T Consensus        83 ~ag~~~k---pG~tR~dL~~~N~~I~~~i~~~i~~~  115 (326)
T 3vku_A           83 TAGAPQK---PGETRLDLVNKNLKILKSIVDPIVDS  115 (326)
T ss_dssp             CCCCC-------------------CHHHHHHHHHTT
T ss_pred             CCCCCCC---CCchHHHHHHHHHHHHHHHHHHHHhc
Confidence            9996422   22234577889999999999999884

>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*

Probab=97.96  E-value=1.8e-05  Score=69.22  Aligned_cols=106  Identities=14%  Similarity=0.163  Sum_probs=69.2

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHhCCC-eEEEEecCCchhhccCCCCCCc---cCCCeeecCCcchhhhcCCCcEEEEC
Q 018503           48 ASQMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRSKAELIFPGKKTR---FFPGVMIAEEPQWRDCIQGSTAVVNL  123 (355)
Q Consensus        48 ~~~~~IlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~---~~~~~d~~~~~~~~~~~~~~d~vi~~  123 (355)
                      |.+|||.|+|+ |.+|..++..|+..|+ +|+.++++++............   ......+.-..+. ++++++|+||.+
T Consensus         5 m~~~kI~viGa-G~vG~~~a~~l~~~~~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~t~d~-~a~~~aDiVIia   82 (324)
T 3gvi_A            5 MARNKIALIGS-GMIGGTLAHLAGLKELGDVVLFDIAEGTPQGKGLDIAESSPVDGFDAKFTGANDY-AAIEGADVVIVT   82 (324)
T ss_dssp             -CCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEEESSG-GGGTTCSEEEEC
T ss_pred             CcCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCchhHHHHHHHHhchhhhcCCCCEEEEeCCH-HHHCCCCEEEEc
Confidence            34579999997 9999999999999998 9999999887542110000000   0001222211223 678899999999


Q ss_pred             CCCCCCCCCChhhHHHHHHHhhhhHHHHHHHHHcC
Q 018503          124 AGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINES  158 (355)
Q Consensus       124 a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~  158 (355)
                      +|.+...   .....+.+..|....+.+.+.+.+.
T Consensus        83 ag~p~k~---G~~R~dl~~~N~~i~~~i~~~i~~~  114 (324)
T 3gvi_A           83 AGVPRKP---GMSRDDLLGINLKVMEQVGAGIKKY  114 (324)
T ss_dssp             CSCCCC--------CHHHHHHHHHHHHHHHHHHHH
T ss_pred             cCcCCCC---CCCHHHHHHhhHHHHHHHHHHHHHH
Confidence            9864221   1223467778999999999988874

>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*

Probab=97.95  E-value=6.3e-05  Score=64.85  Aligned_cols=112  Identities=13%  Similarity=0.135  Sum_probs=74.6

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhCCC--eEEEEecCCchhhc----cCCCCCCccCCCeeecCCcchhhhcCCCcEEEECC
Q 018503           51 MTVSVTGATGFIGRRLVQRLQADNH--QVRVLTRSRSKAEL----IFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLA  124 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~----~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a  124 (355)
                      |||.|+|+ |.+|..++..|+..|+  +|..++++++..+.    +.... .......++.-..+ .++++++|+||.++
T Consensus         1 MkI~ViGa-G~vG~~la~~l~~~~~~~~v~L~D~~~~~~~g~~~dl~~~~-~~~~~~~~i~~t~d-~~a~~~aDiVViaa   77 (294)
T 1oju_A            1 MKLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAA-AGIDKYPKIVGGAD-YSLLKGSEIIVVTA   77 (294)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHH-HTTTCCCEEEEESC-GGGGTTCSEEEECC
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECChHHHHHHHHHHHhhh-hhcCCCCEEEEeCC-HHHhCCCCEEEECC
Confidence            68999998 9999999999999887  99999998865421    00000 00001123331222 56789999999999


Q ss_pred             CCCCCCCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEe
Q 018503          125 GTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVS  169 (355)
Q Consensus       125 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~S  169 (355)
                      |.+...   .....+++..|....+.+.+.+.+. .....++.+|
T Consensus        78 g~~~kp---G~~R~dl~~~N~~i~~~i~~~i~~~-~p~a~iivvs  118 (294)
T 1oju_A           78 GLARKP---GMTRLDLAHKNAGIIKDIAKKIVEN-APESKILVVT  118 (294)
T ss_dssp             CCCCCS---SCCHHHHHHHHHHHHHHHHHHHHTT-STTCEEEECS
T ss_pred             CCCCCC---CCcHHHHHHHHHHHHHHHHHHHHhh-CCCeEEEEeC
Confidence            875222   2234577889999999999999884 2223444444

>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}

Probab=97.94  E-value=8e-06  Score=62.47  Aligned_cols=74  Identities=15%  Similarity=0.059  Sum_probs=54.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhh-cCCCcEEEECCC
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDC-IQGSTAVVNLAG  125 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~-~~~~d~vi~~a~  125 (355)
                      ++++|+|+| .|.+|+.+++.|.+.|++|++++++++..........  .....|..+++.+.++ +.++|+||.+.+
T Consensus         6 ~~~~viIiG-~G~~G~~la~~L~~~g~~v~vid~~~~~~~~~~~~g~--~~i~gd~~~~~~l~~a~i~~ad~vi~~~~   80 (140)
T 3fwz_A            6 ICNHALLVG-YGRVGSLLGEKLLASDIPLVVIETSRTRVDELRERGV--RAVLGNAANEEIMQLAHLECAKWLILTIP   80 (140)
T ss_dssp             CCSCEEEEC-CSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTTC--EEEESCTTSHHHHHHTTGGGCSEEEECCS
T ss_pred             CCCCEEEEC-cCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHcCC--CEEECCCCCHHHHHhcCcccCCEEEEECC
Confidence            346899999 5999999999999999999999999887654432211  0222466666666654 468999998865

>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*

Probab=97.92  E-value=7e-05  Score=65.12  Aligned_cols=100  Identities=17%  Similarity=0.195  Sum_probs=69.4

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhC-C--CeEEEEecCCc-hhh--ccCCCCCCccCCCeeecC--CcchhhhcCCCcEEEE
Q 018503           51 MTVSVTGATGFIGRRLVQRLQAD-N--HQVRVLTRSRS-KAE--LIFPGKKTRFFPGVMIAE--EPQWRDCIQGSTAVVN  122 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~-g--~~V~~~~r~~~-~~~--~~~~~~~~~~~~~~d~~~--~~~~~~~~~~~d~vi~  122 (355)
                      |||.|+||+|++|+.++..|... +  .++..+++.+. ...  .+...     .....+..  .+...+.++++|+||.
T Consensus         1 mKV~IiGAaG~VG~~~a~~L~~~~~~~~el~L~Di~~~~~G~a~Dl~~~-----~~~~~v~~~~~~~~~~~~~~aDivii   75 (312)
T 3hhp_A            1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPVTPGVAVDLSHI-----PTAVKIKGFSGEDATPALEGADVVLI   75 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHSCTTEEEEEECSSTTHHHHHHHHHTS-----CSSEEEEEECSSCCHHHHTTCSEEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCCceEEEEecCCCchhHHHHhhCC-----CCCceEEEecCCCcHHHhCCCCEEEE
Confidence            68999999999999999999875 4  58999998762 111  11111     01122221  1234567889999999


Q ss_pred             CCCCCCCCCCChhhHHHHHHHhhhhHHHHHHHHHcC
Q 018503          123 LAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINES  158 (355)
Q Consensus       123 ~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~  158 (355)
                      +||.+..   ....-.++++.|....+.+.+++.+.
T Consensus        76 ~ag~~rk---pG~~R~dll~~N~~I~~~i~~~i~~~  108 (312)
T 3hhp_A           76 SAGVARK---PGMDRSDLFNVNAGIVKNLVQQVAKT  108 (312)
T ss_dssp             CCSCSCC---TTCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             eCCCCCC---CCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence            9997522   22335688899999999999998874

>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}

Probab=97.91  E-value=5.7e-06  Score=68.47  Aligned_cols=73  Identities=18%  Similarity=0.145  Sum_probs=55.0

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhh-cCCCcEEEECCC
Q 018503           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDC-IQGSTAVVNLAG  125 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~-~~~~d~vi~~a~  125 (355)
                      |+|+|+|+ |.+|+++++.|.+.|++|++++++++....+...... .....|..+++.+.++ ++++|+||.+.+
T Consensus         1 M~iiIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~~~~-~~i~gd~~~~~~l~~a~i~~ad~vi~~~~   74 (218)
T 3l4b_C            1 MKVIIIGG-ETTAYYLARSMLSRKYGVVIINKDRELCEEFAKKLKA-TIIHGDGSHKEILRDAEVSKNDVVVILTP   74 (218)
T ss_dssp             CCEEEECC-HHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHHSSS-EEEESCTTSHHHHHHHTCCTTCEEEECCS
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHcCC-eEEEcCCCCHHHHHhcCcccCCEEEEecC
Confidence            68999995 9999999999999999999999998765543211000 0233567777777765 678999998764

>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*

Probab=97.89  E-value=2.9e-05  Score=66.30  Aligned_cols=73  Identities=15%  Similarity=0.143  Sum_probs=45.7

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHh-CCCeEEEEec-CCchh--hccCCCCCCccCCCeeecCCcchhhhcCCCcEEEECCC
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQA-DNHQVRVLTR-SRSKA--ELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG  125 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~-~g~~V~~~~r-~~~~~--~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~  125 (355)
                      +|||+|+|++|.+|+.+++.+.+ .|++++++.+ +++..  ........   ....++...+++.++++++|+||+++.
T Consensus         5 ~mkV~V~Ga~G~mG~~~~~~~~~~~~~elva~~d~~~~~~~g~d~~~~~g---~~~~~v~~~~dl~~~l~~~DvVIDft~   81 (273)
T 1dih_A            5 NIRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGSDAGELAG---AGKTGVTVQSSLDAVKDDFDVFIDFTR   81 (273)
T ss_dssp             BEEEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTTCSCCTTCSSS---SSCCSCCEESCSTTTTTSCSEEEECSC
T ss_pred             CcEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCchhhhhhhHHHHcC---CCcCCceecCCHHHHhcCCCEEEEcCC
Confidence            47999999999999999999885 5789885544 43221  11100000   111122223455566678999998874

>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}

Probab=97.88  E-value=7e-05  Score=65.45  Aligned_cols=114  Identities=13%  Similarity=0.130  Sum_probs=74.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCC-eEEEEecCCchhhc----cCCCCCCccCCCeeecCCcchhhhcCCCcEEEEC
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRSKAEL----IFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNL  123 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~----~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~  123 (355)
                      .+|||.|+| +|.+|..++..|+..|. +|+.++++++....    +..... .......+.-.+. .++++++|+||.+
T Consensus         4 ~~~kI~iiG-aG~vG~~~a~~l~~~~~~~v~l~Di~~~~~~g~a~dL~~~~~-~~~~~~~v~~t~d-~~a~~~aDvVIi~   80 (321)
T 3p7m_A            4 ARKKITLVG-AGNIGGTLAHLALIKQLGDVVLFDIAQGMPNGKALDLLQTCP-IEGVDFKVRGTND-YKDLENSDVVIVT   80 (321)
T ss_dssp             CCCEEEEEC-CSHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTTHH-HHTCCCCEEEESC-GGGGTTCSEEEEC
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHhCCCceEEEEeCChHHHHHHHHHHHhhhh-hcCCCcEEEEcCC-HHHHCCCCEEEEc
Confidence            357999999 59999999999999887 99999998865431    111000 0001123321122 3678899999999


Q ss_pred             CCCCCCCCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEe
Q 018503          124 AGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVS  169 (355)
Q Consensus       124 a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~S  169 (355)
                      ++.+...   ...-.+.+..|+...+.+.+.+.+.+ ....++.+|
T Consensus        81 ag~p~k~---G~~R~dl~~~N~~i~~~i~~~i~~~~-p~a~vivvt  122 (321)
T 3p7m_A           81 AGVPRKP---GMSRDDLLGINIKVMQTVGEGIKHNC-PNAFVICIT  122 (321)
T ss_dssp             CSCCCCT---TCCHHHHHHHHHHHHHHHHHHHHHHC-TTCEEEECC
T ss_pred             CCcCCCC---CCCHHHHHHHhHHHHHHHHHHHHHHC-CCcEEEEec
Confidence            9875322   22345677889999999999988842 223444443

>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1

Probab=97.84  E-value=8e-05  Score=65.15  Aligned_cols=101  Identities=17%  Similarity=0.255  Sum_probs=66.3

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCC--eEEEEecCCchhhc----cCCCCCCccCCCeeecCCcchhhhcCCCcEEEEC
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNH--QVRVLTRSRSKAEL----IFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNL  123 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~----~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~  123 (355)
                      +|||.|+|+ |++|..++-.|+..|.  +|..++.+.++...    +....  .....+.+.. +. .++++++|+||.+
T Consensus         7 ~~KI~IiGa-G~vG~~~a~~l~~~~~~~ev~L~Di~~~~~~g~~~dl~~~~--~~~~~~~i~~-~~-~~a~~~aDvVii~   81 (318)
T 1y6j_A            7 RSKVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGL--PFMGQMSLYA-GD-YSDVKDCDVIVVT   81 (318)
T ss_dssp             CCCEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSC--CCTTCEEEC---C-GGGGTTCSEEEEC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHhH--HhcCCeEEEE-CC-HHHhCCCCEEEEc
Confidence            479999997 9999999999999987  99999998654321    11110  0112334443 22 4568899999999


Q ss_pred             CCCCCCCCCChhhHHHHHHHhhhhHHHHHHHHHcC
Q 018503          124 AGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINES  158 (355)
Q Consensus       124 a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~  158 (355)
                      ++.+...   .....+....|+...+.+++.+.+.
T Consensus        82 ~g~p~k~---g~~r~dl~~~n~~i~~~i~~~i~~~  113 (318)
T 1y6j_A           82 AGANRKP---GETRLDLAKKNVMIAKEVTQNIMKY  113 (318)
T ss_dssp             CCC---------CHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCC---CcCHHHHHHhhHHHHHHHHHHHHHh
Confidence            9864221   1223466788999999999988873

>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}

Probab=97.82  E-value=6.5e-06  Score=63.29  Aligned_cols=70  Identities=9%  Similarity=0.148  Sum_probs=54.7

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcCCCcEEEECCCC
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT  126 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~  126 (355)
                      .++|+|+| +|.+|+.+++.|.+.|++|++++|+.++...+...     + ..+....+++.++++++|+||.+.+.
T Consensus        21 ~~~v~iiG-~G~iG~~~a~~l~~~g~~v~v~~r~~~~~~~~a~~-----~-~~~~~~~~~~~~~~~~~Divi~at~~   90 (144)
T 3oj0_A           21 GNKILLVG-NGMLASEIAPYFSYPQYKVTVAGRNIDHVRAFAEK-----Y-EYEYVLINDIDSLIKNNDVIITATSS   90 (144)
T ss_dssp             CCEEEEEC-CSHHHHHHGGGCCTTTCEEEEEESCHHHHHHHHHH-----H-TCEEEECSCHHHHHHTCSEEEECSCC
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHH-----h-CCceEeecCHHHHhcCCCEEEEeCCC
Confidence            47999999 59999999999999999999999998765543221     1 13444556777778899999999875

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}

Probab=97.78  E-value=3.1e-05  Score=68.91  Aligned_cols=75  Identities=21%  Similarity=0.187  Sum_probs=54.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcC-----CCcEEEEC
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ-----GSTAVVNL  123 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-----~~d~vi~~  123 (355)
                      ...+|||+||+|.+|..+++.+...|.+|++++|++++.........   ...+|+.+.+++.+.+.     ++|+||++
T Consensus       169 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~~~~~~g~---~~~~d~~~~~~~~~~~~~~~~~~~D~vi~~  245 (347)
T 2hcy_A          169 AGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELFRSIGG---EVFIDFTKEKDIVGAVLKATDGGAHGVINV  245 (347)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHHHHHHHTTC---CEEEETTTCSCHHHHHHHHHTSCEEEEEEC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHHHHHHHcCC---ceEEecCccHhHHHHHHHHhCCCCCEEEEC
Confidence            45689999999999999999999999999999998776543322211   11245554444444332     68999999


Q ss_pred             CCC
Q 018503          124 AGT  126 (355)
Q Consensus       124 a~~  126 (355)
                      ++.
T Consensus       246 ~g~  248 (347)
T 2hcy_A          246 SVS  248 (347)
T ss_dssp             SSC
T ss_pred             CCc
Confidence            873

>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*

Probab=97.78  E-value=4e-05  Score=63.14  Aligned_cols=65  Identities=18%  Similarity=0.306  Sum_probs=50.6

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcCCCcEEEECCC
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG  125 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~  125 (355)
                      +|+|.|+| +|.+|+.+++.|.+.|++|++++|+.+....+...       ++...   ++.++++++|+||.+..
T Consensus        28 ~~~I~iiG-~G~~G~~la~~l~~~g~~V~~~~r~~~~~~~~~~~-------g~~~~---~~~~~~~~~DvVi~av~   92 (215)
T 2vns_A           28 APKVGILG-SGDFARSLATRLVGSGFKVVVGSRNPKRTARLFPS-------AAQVT---FQEEAVSSPEVIFVAVF   92 (215)
T ss_dssp             -CCEEEEC-CSHHHHHHHHHHHHTTCCEEEEESSHHHHHHHSBT-------TSEEE---EHHHHTTSCSEEEECSC
T ss_pred             CCEEEEEc-cCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHc-------CCcee---cHHHHHhCCCEEEECCC
Confidence            47899999 89999999999999999999999987765544332       12222   45667789999998864

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*

Probab=97.78  E-value=2.4e-05  Score=69.22  Aligned_cols=74  Identities=16%  Similarity=0.087  Sum_probs=52.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhc-----CCCcEEEEC
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCI-----QGSTAVVNL  123 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~-----~~~d~vi~~  123 (355)
                      ..++|+|+||+|.+|..+++.+...|++|++++|+.++.........   ...+|..+.+++.+.+     .++|++|++
T Consensus       145 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~~~g~---~~~~d~~~~~~~~~~~~~~~~~~~d~vi~~  221 (333)
T 1v3u_A          145 GGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLKQIGF---DAAFNYKTVNSLEEALKKASPDGYDCYFDN  221 (333)
T ss_dssp             SSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTC---SEEEETTSCSCHHHHHHHHCTTCEEEEEES
T ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcCC---cEEEecCCHHHHHHHHHHHhCCCCeEEEEC
Confidence            45789999999999999999999999999999998765543322111   1224555533433322     268999999


Q ss_pred             CC
Q 018503          124 AG  125 (355)
Q Consensus       124 a~  125 (355)
                      +|
T Consensus       222 ~g  223 (333)
T 1v3u_A          222 VG  223 (333)
T ss_dssp             SC
T ss_pred             CC
Confidence            97

>1xyg_A Putative N-acetyl-gamma-glutamyl-phosphate reduct; structural genomics, protein structure initiative, CENT eukaryotic structural genomics; 2.19A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.1 PDB: 2q49_A 2cvo_A

Probab=97.77  E-value=2.2e-05  Score=69.78  Aligned_cols=75  Identities=16%  Similarity=0.212  Sum_probs=46.3

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHhCC-CeEEEEecCCchhhccCCCCCCccCCC---eeecCCcchhhhcCCCcEEEEC
Q 018503           48 ASQMTVSVTGATGFIGRRLVQRLQADN-HQVRVLTRSRSKAELIFPGKKTRFFPG---VMIAEEPQWRDCIQGSTAVVNL  123 (355)
Q Consensus        48 ~~~~~IlVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~---~d~~~~~~~~~~~~~~d~vi~~  123 (355)
                      |+++||+|.||+|++|+.+++.|.+++ .+++++.+..+..........  .+..   .|+.-.+  .+.++++|+||.|
T Consensus        14 M~~~kV~IiGAtG~iG~~llr~L~~~p~~elvai~~~~~~g~~~~~~~~--~~~~~v~~dl~~~~--~~~~~~vDvVf~a   89 (359)
T 1xyg_A           14 EKDIRIGLLGASGYTGAEIVRLLANHPHFQVTLMTADRKAGQSMESVFP--HLRAQKLPTLVSVK--DADFSTVDAVFCC   89 (359)
T ss_dssp             -CCEEEEEECCSSHHHHHHHHHHHTCSSEEEEEEBCSTTTTSCHHHHCG--GGTTSCCCCCBCGG--GCCGGGCSEEEEC
T ss_pred             ccCcEEEEECcCCHHHHHHHHHHHcCCCcEEEEEeCchhcCCCHHHhCc--hhcCcccccceecc--hhHhcCCCEEEEc
Confidence            445799999999999999999999876 488888765433211110000  0010   1221111  3345689999999


Q ss_pred             CCC
Q 018503          124 AGT  126 (355)
Q Consensus       124 a~~  126 (355)
                      ++.
T Consensus        90 tp~   92 (359)
T 1xyg_A           90 LPH   92 (359)
T ss_dssp             CCT
T ss_pred             CCc
Confidence            864

>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}

Probab=97.77  E-value=5.3e-05  Score=69.56  Aligned_cols=76  Identities=18%  Similarity=0.339  Sum_probs=53.2

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCe-----------eecCCcchhhhcCCCc
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGV-----------MIAEEPQWRDCIQGST  118 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~-----------d~~~~~~~~~~~~~~d  118 (355)
                      +|||.|+| +|++|..++..|.+.||+|++++|++++...+.........+..           .+.-..++.++++++|
T Consensus         2 ~mkI~VIG-~G~vG~~lA~~La~~G~~V~~~D~~~~~v~~l~~g~~~i~e~gl~~~l~~~~~~~~l~~t~d~~ea~~~aD   80 (450)
T 3gg2_A            2 SLDIAVVG-IGYVGLVSATCFAELGANVRCIDTDRNKIEQLNSGTIPIYEPGLEKMIARNVKAGRLRFGTEIEQAVPEAD   80 (450)
T ss_dssp             CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTCSCCCSTTHHHHHHHHHHTTSEEEESCHHHHGGGCS
T ss_pred             CCEEEEEC-cCHHHHHHHHHHHhcCCEEEEEECCHHHHHHHHcCCCcccCCCHHHHHHhhcccCcEEEECCHHHHHhcCC
Confidence            37999999 69999999999999999999999998765544321110000111           1222345666778899


Q ss_pred             EEEECCCC
Q 018503          119 AVVNLAGT  126 (355)
Q Consensus       119 ~vi~~a~~  126 (355)
                      +||-+.+.
T Consensus        81 vViiaVpt   88 (450)
T 3gg2_A           81 IIFIAVGT   88 (450)
T ss_dssp             EEEECCCC
T ss_pred             EEEEEcCC
Confidence            99999864

>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*

Probab=97.77  E-value=8.2e-05  Score=65.10  Aligned_cols=104  Identities=13%  Similarity=0.107  Sum_probs=69.4

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHhCC--CeEEEEecCCchhhcc----CCCCCCccCCCeeecCCcchhhhcCCCcEEE
Q 018503           48 ASQMTVSVTGATGFIGRRLVQRLQADN--HQVRVLTRSRSKAELI----FPGKKTRFFPGVMIAEEPQWRDCIQGSTAVV  121 (355)
Q Consensus        48 ~~~~~IlVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~----~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi  121 (355)
                      +++|||.|+|| |.+|..++..|+..|  .+|..+++++++....    ..... .....+.+.. + -.++++++|+||
T Consensus         4 m~~~KI~IIGa-G~vG~~la~~l~~~~~~~ei~L~Di~~~~~~g~~~dl~~~~~-~~~~~~~v~~-~-~~~a~~~aDvVv   79 (317)
T 3d0o_A            4 FKGNKVVLIGN-GAVGSSYAFSLVNQSIVDELVIIDLDTEKVRGDVMDLKHATP-YSPTTVRVKA-G-EYSDCHDADLVV   79 (317)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHHHCSCSEEEEECSCHHHHHHHHHHHHHHGG-GSSSCCEEEE-C-CGGGGTTCSEEE
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHhhhhhhhHHhhhh-hcCCCeEEEe-C-CHHHhCCCCEEE
Confidence            34579999998 999999999999887  4899999876433211    00000 0001223332 2 246688999999


Q ss_pred             ECCCCCCCCCCChhhHHHHHHHhhhhHHHHHHHHHcC
Q 018503          122 NLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINES  158 (355)
Q Consensus       122 ~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~  158 (355)
                      .+++.+...   .....+....|....+.+.+.+.+.
T Consensus        80 i~ag~~~~~---g~~r~dl~~~n~~i~~~i~~~i~~~  113 (317)
T 3d0o_A           80 ICAGAAQKP---GETRLDLVSKNLKIFKSIVGEVMAS  113 (317)
T ss_dssp             ECCCCCCCT---TCCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             ECCCCCCCC---CCcHHHHHHHHHHHHHHHHHHHHHh
Confidence            999875322   2223466788998999999988884

>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}

Probab=97.77  E-value=8.4e-05  Score=63.18  Aligned_cols=73  Identities=16%  Similarity=0.133  Sum_probs=47.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhC-CCeEEEE-ecCCchhh--ccCCCCCCccCCCeeecCCcchhhhcCCCcEEEECC
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQAD-NHQVRVL-TRSRSKAE--LIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLA  124 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~-g~~V~~~-~r~~~~~~--~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a  124 (355)
                      ++|||.|+|++|.+|+.+++.+.+. ++++.++ +|+.+...  .......   ... ++.-.+++.+++.++|+||.+.
T Consensus         6 ~mikV~V~Ga~G~MG~~i~~~l~~~~~~eLv~~~d~~~~~~~G~d~gel~g---~~~-gv~v~~dl~~ll~~~DVVIDfT   81 (272)
T 4f3y_A            6 SSMKIAIAGASGRMGRMLIEAVLAAPDATLVGALDRTGSPQLGQDAGAFLG---KQT-GVALTDDIERVCAEADYLIDFT   81 (272)
T ss_dssp             CCEEEEESSTTSHHHHHHHHHHHHCTTEEEEEEBCCTTCTTTTSBTTTTTT---CCC-SCBCBCCHHHHHHHCSEEEECS
T ss_pred             cccEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEEecCcccccccHHHHhC---CCC-CceecCCHHHHhcCCCEEEEcC
Confidence            4579999999999999999999875 6788875 56543211  1100000   111 2223456677777899999986


Q ss_pred             C
Q 018503          125 G  125 (355)
Q Consensus       125 ~  125 (355)
                      .
T Consensus        82 ~   82 (272)
T 4f3y_A           82 L   82 (272)
T ss_dssp             C
T ss_pred             C
Confidence            3

>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}

Probab=97.76  E-value=2e-05  Score=70.70  Aligned_cols=74  Identities=14%  Similarity=0.140  Sum_probs=56.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCC-CCCCccCCCeeecCCcchhhhcCCCcEEEECCCC
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP-GKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT  126 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~  126 (355)
                      .+++|+|+|+ |.+|..+++.|...|++|++++|++++...... ...   ....+..+.+.+.++++++|+||++++.
T Consensus       165 ~~~~V~ViGa-G~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~~~~~g~---~~~~~~~~~~~l~~~~~~~DvVi~~~g~  239 (369)
T 2eez_A          165 APASVVILGG-GTVGTNAAKIALGMGAQVTILDVNHKRLQYLDDVFGG---RVITLTATEANIKKSVQHADLLIGAVLV  239 (369)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTT---SEEEEECCHHHHHHHHHHCSEEEECCC-
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhcCc---eEEEecCCHHHHHHHHhCCCEEEECCCC
Confidence            3479999998 999999999999999999999998866443321 111   1224555667788888899999999975

>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*

Probab=97.75  E-value=0.00028  Score=62.10  Aligned_cols=108  Identities=13%  Similarity=0.122  Sum_probs=69.4

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCC-eEEEEecCCchhhccCCC---CCCccCCCeeecCCcchhhhcCCCcEEEECCC
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRSKAELIFPG---KKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG  125 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~---~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~  125 (355)
                      +|||.|+|| |.+|..++..|...|+ +|..++++++........   ..........+.-..++.+.++++|+||.+++
T Consensus         9 ~~kI~VIGa-G~vG~~lA~~la~~g~~~V~L~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t~d~~ea~~~aDiVi~a~g   87 (331)
T 1pzg_A            9 RKKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRAEYSYEAALTGADCVIVTAG   87 (331)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEEECSHHHHHTTCSEEEECCS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEECChhHHHHHHHHHHhhhhccCCCCEEEEeCCHHHHhCCCCEEEEccC
Confidence            379999997 9999999999999998 999999987654431100   00000011222222456667899999999998


Q ss_pred             CCCCCCCCh--hhHHHHHHHhhhhHHHHHHHHHcC
Q 018503          126 TPIGTRWSS--EIKKEIKESRIRVTSKVVDLINES  158 (355)
Q Consensus       126 ~~~~~~~~~--~~~~~~~~~n~~~~~~l~~a~~~~  158 (355)
                      .+.......  ....+....|....+.+.+.+.+.
T Consensus        88 ~p~~~g~~~~~~~r~dl~~~n~~i~~~i~~~i~~~  122 (331)
T 1pzg_A           88 LTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKY  122 (331)
T ss_dssp             CSSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCcccCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence            643221100  012344567788888888888773

>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}

Probab=97.75  E-value=9.3e-05  Score=64.45  Aligned_cols=104  Identities=16%  Similarity=0.111  Sum_probs=68.5

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCC-eEEEEecCC--chhhccCCCCC--Cc-cCCCeeecCCcchhhhcCCCcEEEEC
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSR--SKAELIFPGKK--TR-FFPGVMIAEEPQWRDCIQGSTAVVNL  123 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~--~~~~~~~~~~~--~~-~~~~~d~~~~~~~~~~~~~~d~vi~~  123 (355)
                      .+||.|+|+ |.+|..++..|+..|+ +|+.+++++  ...........  .. ......+.-.++ .+.++++|+||.+
T Consensus         8 ~~kv~ViGa-G~vG~~ia~~l~~~g~~~v~l~D~~~~~~~~~g~a~dl~~~~~~~~~~~~i~~t~d-~~a~~~aDvVIia   85 (315)
T 3tl2_A            8 RKKVSVIGA-GFTGATTAFLLAQKELADVVLVDIPQLENPTKGKALDMLEASPVQGFDANIIGTSD-YADTADSDVVVIT   85 (315)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCGGGHHHHHHHHHHHHHHHHHHTCCCCEEEESC-GGGGTTCSEEEEC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccchHHHHHHhhhhHHHhhhhccCCCEEEEcCC-HHHhCCCCEEEEe
Confidence            469999996 9999999999999999 999999983  22211100000  00 000111211111 2567899999999


Q ss_pred             CCCCCCCCCChhhHHHHHHHhhhhHHHHHHHHHcC
Q 018503          124 AGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINES  158 (355)
Q Consensus       124 a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~  158 (355)
                      +|.+...   ...-.+.+..|....+.+.+.+.+.
T Consensus        86 ag~p~kp---g~~R~dl~~~N~~i~~~i~~~i~~~  117 (315)
T 3tl2_A           86 AGIARKP---GMSRDDLVATNSKIMKSITRDIAKH  117 (315)
T ss_dssp             CSCCCCT---TCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCC---CCCHHHHHHHHHHHHHHHHHHHHHh
Confidence            9875322   2234578889999999999988873

>4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A

Probab=97.74  E-value=3.7e-05  Score=68.01  Aligned_cols=79  Identities=10%  Similarity=-0.047  Sum_probs=57.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHH-hCCCeEEEEecCCchhhccC----------------CCCCCccCCCeeecCCcchh
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQ-ADNHQVRVLTRSRSKAELIF----------------PGKKTRFFPGVMIAEEPQWR  111 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~-~~g~~V~~~~r~~~~~~~~~----------------~~~~~~~~~~~d~~~~~~~~  111 (355)
                      .+|++|||||+..+|.+.+..|. +.|..|+++.+..+......                ..+.......+|+.+.+.+.
T Consensus        49 ~pK~vLVtGaSsGiGlA~AialAf~~GA~vi~v~~~~~~~~~~~atag~~~~~a~~~~i~~~G~~a~~i~~Dv~d~e~i~  128 (401)
T 4ggo_A           49 APKNVLVLGCSNGYGLASRITAAFGYGAATIGVSFEKAGSETKYGTPGWYNNLAFDEAAKREGLYSVTIDGDAFSDEIKA  128 (401)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHHTCCEEEEESCTTSHHHHH
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHhhCCCCEEEEecCCcccccccccccchhHHHHHHHHHHcCCCceeEeCCCCCHHHHH
Confidence            35899999999999999999998 57999999988765432211                11111123457888887766


Q ss_pred             hhc-------CCCcEEEECCCCC
Q 018503          112 DCI-------QGSTAVVNLAGTP  127 (355)
Q Consensus       112 ~~~-------~~~d~vi~~a~~~  127 (355)
                      +++       .++|++||++|.+
T Consensus       129 ~vi~~i~~~~G~IDiLVhS~A~~  151 (401)
T 4ggo_A          129 QVIEEAKKKGIKFDLIVYSLASP  151 (401)
T ss_dssp             HHHHHHHHTTCCEEEEEECCCCS
T ss_pred             HHHHHHHHhcCCCCEEEEecccc
Confidence            555       3689999999975

>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}

Probab=97.72  E-value=3.8e-05  Score=66.29  Aligned_cols=66  Identities=17%  Similarity=0.251  Sum_probs=49.9

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcCCCcEEEECCC
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG  125 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~  125 (355)
                      +|+|.|+|+||.+|+.+++.|.+.|++|++++|+++....+....       ++..   +..+.++++|+||.+..
T Consensus        11 mm~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~g-------~~~~---~~~~~~~~aDvVi~av~   76 (286)
T 3c24_A           11 PKTVAILGAGGKMGARITRKIHDSAHHLAAIEIAPEGRDRLQGMG-------IPLT---DGDGWIDEADVVVLALP   76 (286)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSHHHHHHHHHTT-------CCCC---CSSGGGGTCSEEEECSC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHhcC-------CCcC---CHHHHhcCCCEEEEcCC
Confidence            479999998899999999999999999999999876654432211       2222   23455678999998863

>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}

Probab=97.72  E-value=8.3e-05  Score=64.69  Aligned_cols=103  Identities=14%  Similarity=0.145  Sum_probs=67.3

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhCCC--eEEEEecCCchhhccCCCCCCc---cCCCeeecCCcchhhhcCCCcEEEECCC
Q 018503           51 MTVSVTGATGFIGRRLVQRLQADNH--QVRVLTRSRSKAELIFPGKKTR---FFPGVMIAEEPQWRDCIQGSTAVVNLAG  125 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~---~~~~~d~~~~~~~~~~~~~~d~vi~~a~  125 (355)
                      |||.|+|+ |.+|+.++..|+..|.  +|+.+++++.+...........   ......+.-. ...+.++++|+||.++|
T Consensus         1 Mkv~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~~v~~~-~~~~a~~~aDvVii~ag   78 (314)
T 3nep_X            1 MKVTVIGA-GNVGATVAECVARQDVAKEVVMVDIKDGMPQGKALDMRESSPIHGFDTRVTGT-NDYGPTEDSDVCIITAG   78 (314)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCSSEEEEECSSTTHHHHHHHHHHHHHHHHTCCCEEEEE-SSSGGGTTCSEEEECCC
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCchHHHHHHHHHHhccccccCCCcEEEEC-CCHHHhCCCCEEEECCC
Confidence            78999996 9999999999999886  9999999886533110000000   0011222211 12356789999999998


Q ss_pred             CCCCCCCChhhHHHHHHHhhhhHHHHHHHHHcC
Q 018503          126 TPIGTRWSSEIKKEIKESRIRVTSKVVDLINES  158 (355)
Q Consensus       126 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~  158 (355)
                      .+..   ....-.+.+..|....+.+.+.+.+.
T Consensus        79 ~~~k---pG~~R~dl~~~N~~i~~~i~~~i~~~  108 (314)
T 3nep_X           79 LPRS---PGMSRDDLLAKNTEIVGGVTEQFVEG  108 (314)
T ss_dssp             C----------CHHHHHHHHHHHHHHHHHHHTT
T ss_pred             CCCC---CCCCHHHHHHhhHHHHHHHHHHHHHh
Confidence            6422   12223577889999999999999884

>3pwk_A Aspartate-semialdehyde dehydrogenase; NADP binding, oxidoreductase-oxidoreductase I complex; HET: 25A L14; 1.50A {Streptococcus pneumoniae} PDB: 2gyy_A* 2gz2_A* 2gz3_A* 2gz1_A* 3pws_A* 3pyl_A 3pyx_A* 3pzb_A* 3q11_A* 3q1l_A

Probab=97.71  E-value=0.00012  Score=64.87  Aligned_cols=69  Identities=26%  Similarity=0.388  Sum_probs=42.6

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCC---eEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcCCCcEEEECCC
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNH---QVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG  125 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~  125 (355)
                      ++||.|+||||++|..|++.|.+++|   ++..+....+........     .....+.+.+  ...++++|+||.|++
T Consensus         2 ~~kVaIvGATG~vG~eLlrlL~~~~~p~~el~~~as~~saG~~~~~~-----~~~~~~~~~~--~~~~~~~Dvvf~a~~   73 (366)
T 3pwk_A            2 GYTVAVVGATGAVGAQMIKMLEESTLPIDKIRYLASARSAGKSLKFK-----DQDITIEETT--ETAFEGVDIALFSAG   73 (366)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHTCCCCEEEEEEEECTTTTTCEEEET-----TEEEEEEECC--TTTTTTCSEEEECSC
T ss_pred             CcEEEEECCCChHHHHHHHHHhcCCCCcEEEEEEEccccCCCcceec-----CCCceEeeCC--HHHhcCCCEEEECCC
Confidence            47999999999999999999998765   455554333222221110     0112222222  123578999999986

>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5

Probab=97.70  E-value=4.6e-05  Score=65.21  Aligned_cols=74  Identities=15%  Similarity=0.139  Sum_probs=52.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcCCCcEEEECCCCC
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTP  127 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~~  127 (355)
                      ..++++|+|+ |.+|++++..|++.|.+|++++|+.++...+......  ...++..+.+++.+  .++|+||++++..
T Consensus       118 ~~k~vlViGa-Gg~g~a~a~~L~~~G~~V~v~~R~~~~~~~la~~~~~--~~~~~~~~~~~~~~--~~~DivVn~t~~~  191 (271)
T 1nyt_A          118 PGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAH--TGSIQALSMDELEG--HEFDLIINATSSG  191 (271)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGG--GSSEEECCSGGGTT--CCCSEEEECCSCG
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHhhc--cCCeeEecHHHhcc--CCCCEEEECCCCC
Confidence            3579999997 7899999999999999999999997765443221100  01234444444433  5899999999863

>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*

Probab=97.70  E-value=0.00014  Score=62.48  Aligned_cols=102  Identities=14%  Similarity=0.156  Sum_probs=68.2

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhCC--CeEEEEecCCchhhc----cCCCCCCccCCCeeecCCcchhhhcCCCcEEEECC
Q 018503           51 MTVSVTGATGFIGRRLVQRLQADN--HQVRVLTRSRSKAEL----IFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLA  124 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~----~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a  124 (355)
                      |||.|+|| |.+|+.++-.|+.++  -++..++..+....-    +..... .......+....+. +.++++|+||-.|
T Consensus         1 MKV~IiGa-G~VG~~~a~~l~~~~~~~el~L~Di~~~~~~G~a~DL~h~~~-~~~~~~~i~~~~d~-~~~~~aDvVvitA   77 (294)
T 2x0j_A            1 MKLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAA-GIDKYPKIVGGADY-SLLKGSEIIVVTA   77 (294)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHG-GGTCCCEEEEESCG-GGGTTCSEEEECC
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEeCCCCcchhhhhhhhcccc-cCCCCCeEecCCCH-HHhCCCCEEEEec
Confidence            79999995 999999999998876  489999987643221    100000 00001112211122 4578999999999


Q ss_pred             CCCCCCCCChhhHHHHHHHhhhhHHHHHHHHHcC
Q 018503          125 GTPIGTRWSSEIKKEIKESRIRVTSKVVDLINES  158 (355)
Q Consensus       125 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~  158 (355)
                      |.+..+   ...-.+++..|..-.+.+.+.+.+.
T Consensus        78 G~prkp---GmtR~dLl~~Na~I~~~i~~~i~~~  108 (294)
T 2x0j_A           78 GLARKP---GMTRLDLAHKNAGIIKDIAKKIVEN  108 (294)
T ss_dssp             CCCCCS---SSCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             CCCCCC---CCchHHHHHHHHHHHHHHHHHHHhc
Confidence            975332   2344688899999999999999884

>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}

Probab=97.67  E-value=9.8e-05  Score=64.03  Aligned_cols=66  Identities=12%  Similarity=0.061  Sum_probs=50.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcCCCcEEEECCC
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG  125 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~  125 (355)
                      ++|+|.|+| .|.+|..++..|.+.||+|++.+|++++...+....       +.  -.+++.++++ +|+||.+..
T Consensus        14 ~~~~I~vIG-~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~~g-------~~--~~~~~~~~~~-aDvvi~~vp   79 (296)
T 3qha_A           14 EQLKLGYIG-LGNMGAPMATRMTEWPGGVTVYDIRIEAMTPLAEAG-------AT--LADSVADVAA-ADLIHITVL   79 (296)
T ss_dssp             -CCCEEEEC-CSTTHHHHHHHHTTSTTCEEEECSSTTTSHHHHHTT-------CE--ECSSHHHHTT-SSEEEECCS
T ss_pred             CCCeEEEEC-cCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCC-------CE--EcCCHHHHHh-CCEEEEECC
Confidence            357999999 799999999999999999999999987755443221       12  2345667777 999998864

>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*

Probab=97.67  E-value=0.00015  Score=63.51  Aligned_cols=107  Identities=12%  Similarity=0.178  Sum_probs=66.8

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCC-eEEEEecCCchhhccCCCCCC---ccCCCeeecCCcchhhhcCCCcEEEECCC
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRSKAELIFPGKKT---RFFPGVMIAEEPQWRDCIQGSTAVVNLAG  125 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~---~~~~~~d~~~~~~~~~~~~~~d~vi~~a~  125 (355)
                      +|||.|+|| |.+|..++..|+..|+ +|..++++++...........   .......+....++ ++++++|+||.+++
T Consensus         4 ~~kI~VIGa-G~vG~~ia~~la~~g~~~v~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t~d~-~al~~aD~Vi~a~g   81 (322)
T 1t2d_A            4 KAKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGSNTY-DDLAGADVVIVTAG   81 (322)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEECCG-GGGTTCSEEEECCS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhhhhcCCCcEEEECCCH-HHhCCCCEEEEeCC
Confidence            479999997 9999999999999998 999999887654321100000   00011223222345 66889999999998


Q ss_pred             CCCCCCCC--hhhHHHHHHHhhhhHHHHHHHHHcC
Q 018503          126 TPIGTRWS--SEIKKEIKESRIRVTSKVVDLINES  158 (355)
Q Consensus       126 ~~~~~~~~--~~~~~~~~~~n~~~~~~l~~a~~~~  158 (355)
                      .+......  +..-.+....|+...+.+.+.+.+.
T Consensus        82 ~p~k~g~~~qe~~r~dl~~~n~~i~~~i~~~i~~~  116 (322)
T 1t2d_A           82 FTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKN  116 (322)
T ss_dssp             CSSCTTCCSTTCCGGGGHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHH
Confidence            64221111  0001244566777778888877773

>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...

Probab=97.67  E-value=9.8e-05  Score=64.64  Aligned_cols=113  Identities=14%  Similarity=0.196  Sum_probs=73.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCC--eEEEEecCCchhhc----cCCCCCCccCCCeeecCCcchhhhcCCCcEEEE
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNH--QVRVLTRSRSKAEL----IFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVN  122 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~----~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~  122 (355)
                      ..|||.|+|+ |.+|..++..|+..|.  +|..++++.+....    +.....  ......+....+.+ .++++|+||.
T Consensus        18 ~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~a~DL~~~~~--~~~~~~i~~~~d~~-~~~~aDiVvi   93 (331)
T 4aj2_A           18 PQNKITVVGV-GAVGMACAISILMKDLADELALVDVIEDKLKGEMMDLQHGSL--FLKTPKIVSSKDYS-VTANSKLVII   93 (331)
T ss_dssp             CSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGG--GCSCCEEEECSSGG-GGTTEEEEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEeCChHHHHHHHHhhhhhhh--ccCCCeEEEcCCHH-HhCCCCEEEE
Confidence            4579999996 9999999999999886  89999997654322    111000  00011222222333 5889999999


Q ss_pred             CCCCCCCCCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEe
Q 018503          123 LAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVS  169 (355)
Q Consensus       123 ~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~S  169 (355)
                      +||.+...   ...-.+.+..|..-.+.+.+.+.+. .....++.+|
T Consensus        94 ~aG~~~kp---G~tR~dL~~~N~~I~~~i~~~i~~~-~p~a~vlvvt  136 (331)
T 4aj2_A           94 TAGARQQE---GESRLNLVQRNVNIFKFIIPNVVKY-SPQCKLLIVS  136 (331)
T ss_dssp             CCSCCCCT---TCCGGGGHHHHHHHHHHHHHHHHHH-CTTCEEEECS
T ss_pred             ccCCCCCC---CccHHHHHHHHHHHHHHHHHHHHHH-CCCeEEEEec
Confidence            99975322   2223467889999999999988874 2223444444

>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1

Probab=97.66  E-value=8.9e-05  Score=64.81  Aligned_cols=112  Identities=13%  Similarity=0.132  Sum_probs=69.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCC--eEEEEecCCchhhccCC---CCCCccCCCeeecCCcchhhhcCCCcEEEEC
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNH--QVRVLTRSRSKAELIFP---GKKTRFFPGVMIAEEPQWRDCIQGSTAVVNL  123 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~---~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~  123 (355)
                      ++|||.|+|| |.+|..++-.|+..+.  +|..++++.++......   ... .....+.+.. + -.++++++|+||.+
T Consensus         4 ~~~KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~-~~~~~~~v~~-~-~~~a~~~aDvVii~   79 (318)
T 1ez4_A            4 NHQKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQ-AFTAPKKIYS-G-EYSDCKDADLVVIT   79 (318)
T ss_dssp             TBCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGG-GGSCCCEEEE-C-CGGGGTTCSEEEEC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCCchHHHHHHHHHHHHH-HhcCCeEEEE-C-CHHHhCCCCEEEEC
Confidence            3479999998 9999999999998875  89999997654432100   000 0011233332 2 24568899999999


Q ss_pred             CCCCCCCCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEE
Q 018503          124 AGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLV  168 (355)
Q Consensus       124 a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~  168 (355)
                      ++.+...   ...-.+.+..|+...+.+.+.+.+.+ ....++.+
T Consensus        80 ag~~~~~---g~~R~dl~~~n~~i~~~i~~~i~~~~-p~a~iiv~  120 (318)
T 1ez4_A           80 AGAPQKP---GESRLDLVNKNLNILSSIVKPVVDSG-FDGIFLVA  120 (318)
T ss_dssp             CCC-------------CHHHHHHHHHHHHHHHHHTT-CCSEEEEC
T ss_pred             CCCCCCC---CCCHHHHHHHHHHHHHHHHHHHHHhC-CCeEEEEe
Confidence            9874221   12223566788899999999888842 23344443

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*

Probab=97.66  E-value=4.4e-05  Score=67.83  Aligned_cols=74  Identities=20%  Similarity=0.127  Sum_probs=52.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccC-CCCCCccCCCeeecCCcchhhhc-----CCCcEEEE
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIF-PGKKTRFFPGVMIAEEPQWRDCI-----QGSTAVVN  122 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~d~~~~~~~~~~~-----~~~d~vi~  122 (355)
                      ...+|||+||+|.+|..+++.+...|.+|++++|+.++..... ....   ...+|..+.+++.+.+     .++|+||+
T Consensus       155 ~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~~g~---~~~~d~~~~~~~~~~~~~~~~~~~d~vi~  231 (345)
T 2j3h_A          155 EGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLKTKFGF---DDAFNYKEESDLTAALKRCFPNGIDIYFE  231 (345)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTSCC---SEEEETTSCSCSHHHHHHHCTTCEEEEEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCC---ceEEecCCHHHHHHHHHHHhCCCCcEEEE
Confidence            3568999999999999999999999999999999877654433 2221   1124554443333322     36899999


Q ss_pred             CCC
Q 018503          123 LAG  125 (355)
Q Consensus       123 ~a~  125 (355)
                      ++|
T Consensus       232 ~~g  234 (345)
T 2j3h_A          232 NVG  234 (345)
T ss_dssp             SSC
T ss_pred             CCC
Confidence            987

>1ys4_A Aspartate-semialdehyde dehydrogenase; oxidoreductase, asadh; HET: NAP; 2.29A {Methanocaldococcus jannaschii}

Probab=97.64  E-value=8e-05  Score=66.21  Aligned_cols=34  Identities=38%  Similarity=0.585  Sum_probs=29.7

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCC-CeEEEEecC
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADN-HQVRVLTRS   83 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g-~~V~~~~r~   83 (355)
                      +|||.|.||+|++|+.+++.|.+++ .+|+++.++
T Consensus         8 ~~kV~IiGAtG~iG~~llr~L~~~p~~ev~~i~~s   42 (354)
T 1ys4_A            8 KIKVGVLGATGSVGQRFVQLLADHPMFELTALAAS   42 (354)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHTTCSSEEEEEEEEC
T ss_pred             cceEEEECcCCHHHHHHHHHHhcCCCCEEEEEEcc
Confidence            4699999999999999999998874 689888754

>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*

Probab=97.63  E-value=0.00026  Score=61.72  Aligned_cols=103  Identities=17%  Similarity=0.198  Sum_probs=67.9

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhC--CCeEEEEecCCchhhccC---CCCCCccCCCeeecCCcchhhhcCCCcEEEECCC
Q 018503           51 MTVSVTGATGFIGRRLVQRLQAD--NHQVRVLTRSRSKAELIF---PGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG  125 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~---~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~  125 (355)
                      |||.|+|+ |.+|..++..|...  |++|+.++++++......   ............+....+..+ ++++|+||.+++
T Consensus         1 mkI~VIGa-G~vG~~la~~la~~~~g~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t~d~~~-l~~aDvViiav~   78 (310)
T 1guz_A            1 MKITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGSNDYAD-TANSDIVIITAG   78 (310)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEESCGGG-GTTCSEEEECCS
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHhHHhhhhcccCCcEEEECCCHHH-HCCCCEEEEeCC
Confidence            68999997 99999999999985  799999999886544221   000000001112222233444 789999999997


Q ss_pred             CCCCCCCChhhHHHHHHHhhhhHHHHHHHHHcC
Q 018503          126 TPIGTRWSSEIKKEIKESRIRVTSKVVDLINES  158 (355)
Q Consensus       126 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~  158 (355)
                      .+..   ......+++..|....+.+.+.+.+.
T Consensus        79 ~p~~---~g~~r~dl~~~n~~i~~~i~~~i~~~  108 (310)
T 1guz_A           79 LPRK---PGMTREDLLMKNAGIVKEVTDNIMKH  108 (310)
T ss_dssp             CCCC---TTCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCC---CCCCHHHHHHHHHHHHHHHHHHHHHh
Confidence            5321   12223467778888888888888773

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=97.62  E-value=2.6e-05  Score=68.74  Aligned_cols=74  Identities=15%  Similarity=0.071  Sum_probs=52.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhh---hc--CCCcEEEEC
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRD---CI--QGSTAVVNL  123 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~---~~--~~~d~vi~~  123 (355)
                      ...+|+|+||+|.+|..+++.+...|++|++++|++++.........   ...+|..+.+..++   ..  .++|+||++
T Consensus       140 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~g~---~~~~~~~~~~~~~~~~~~~~~~~~D~vi~~  216 (327)
T 1qor_A          140 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALKAGA---WQVINYREEDLVERLKEITGGKKVRVVYDS  216 (327)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHTC---SEEEETTTSCHHHHHHHHTTTCCEEEEEEC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCC---CEEEECCCccHHHHHHHHhCCCCceEEEEC
Confidence            35789999999999999999999999999999998765443322111   11245545443333   22  268999999


Q ss_pred             CC
Q 018503          124 AG  125 (355)
Q Consensus       124 a~  125 (355)
                      +|
T Consensus       217 ~g  218 (327)
T 1qor_A          217 VG  218 (327)
T ss_dssp             SC
T ss_pred             Cc
Confidence            97

>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*

Probab=97.60  E-value=6.2e-05  Score=66.58  Aligned_cols=74  Identities=16%  Similarity=0.103  Sum_probs=53.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhcc-CCCCCCccCCCeeecCCcchhhh---c-CCCcEEEEC
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELI-FPGKKTRFFPGVMIAEEPQWRDC---I-QGSTAVVNL  123 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~~~~d~~~~~~~~~~---~-~~~d~vi~~  123 (355)
                      ...+|||+||+|.+|..+++.+...|.+|++++|++++.... .....   ...+|..+.+..+.+   . .++|+||++
T Consensus       149 ~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~~g~---~~~~~~~~~~~~~~~~~~~~~~~d~vi~~  225 (336)
T 4b7c_A          149 NGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFLVEELGF---DGAIDYKNEDLAAGLKRECPKGIDVFFDN  225 (336)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCC---SEEEETTTSCHHHHHHHHCTTCEEEEEES
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCC---CEEEECCCHHHHHHHHHhcCCCceEEEEC
Confidence            456899999999999999999999999999999988776554 33221   112444444433222   2 368999999


Q ss_pred             CC
Q 018503          124 AG  125 (355)
Q Consensus       124 a~  125 (355)
                      +|
T Consensus       226 ~g  227 (336)
T 4b7c_A          226 VG  227 (336)
T ss_dssp             SC
T ss_pred             CC
Confidence            87

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1

Probab=97.60  E-value=4.8e-05  Score=67.73  Aligned_cols=74  Identities=14%  Similarity=0.136  Sum_probs=52.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchh---hhcC--CCcEEEEC
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWR---DCIQ--GSTAVVNL  123 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~---~~~~--~~d~vi~~  123 (355)
                      ...+|+|+||+|.+|..+++.+...|.+|++++|++++.........   ...+|..+.+..+   +...  ++|+||++
T Consensus       170 ~g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga---~~~~d~~~~~~~~~~~~~~~~~~~D~vi~~  246 (351)
T 1yb5_A          170 AGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIVLQNGA---HEVFNHREVNYIDKIKKYVGEKGIDIIIEM  246 (351)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTC---SEEEETTSTTHHHHHHHHHCTTCEEEEEES
T ss_pred             CcCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHcCC---CEEEeCCCchHHHHHHHHcCCCCcEEEEEC
Confidence            35689999999999999999999999999999998766543322211   1123444443332   3332  68999999


Q ss_pred             CC
Q 018503          124 AG  125 (355)
Q Consensus       124 a~  125 (355)
                      +|
T Consensus       247 ~G  248 (351)
T 1yb5_A          247 LA  248 (351)
T ss_dssp             CH
T ss_pred             CC
Confidence            86

>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}

Probab=97.60  E-value=0.00019  Score=61.29  Aligned_cols=77  Identities=16%  Similarity=0.178  Sum_probs=47.2

Q ss_pred             ccCCCCEEEEEcCCchHHHHHHHHHHhC-CCeEEEE-ecCCchh--hccCCCCCCccCCCeeecCCcchhhhcCCCcEEE
Q 018503           46 QKASQMTVSVTGATGFIGRRLVQRLQAD-NHQVRVL-TRSRSKA--ELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVV  121 (355)
Q Consensus        46 ~~~~~~~IlVtGatG~iG~~l~~~L~~~-g~~V~~~-~r~~~~~--~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi  121 (355)
                      .|++++||.|.|++|.+|+.+++.+.+. +.++.++ +|+.+..  ........   ....++.-.+++++++.++|+||
T Consensus        17 ~m~~~irV~V~Ga~GrMGr~i~~~v~~~~~~eLvg~vd~~~~~~~G~d~gel~G---~~~~gv~v~~dl~~ll~~aDVvI   93 (288)
T 3ijp_A           17 QGPGSMRLTVVGANGRMGRELITAIQRRKDVELCAVLVRKGSSFVDKDASILIG---SDFLGVRITDDPESAFSNTEGIL   93 (288)
T ss_dssp             ----CEEEEESSTTSHHHHHHHHHHHTCSSEEEEEEBCCTTCTTTTSBGGGGTT---CSCCSCBCBSCHHHHTTSCSEEE
T ss_pred             hccCCeEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCccccccchHHhhc---cCcCCceeeCCHHHHhcCCCEEE
Confidence            3445579999999999999999999875 7887776 4443221  10000000   11122223456777788999999


Q ss_pred             ECCC
Q 018503          122 NLAG  125 (355)
Q Consensus       122 ~~a~  125 (355)
                      .+..
T Consensus        94 DFT~   97 (288)
T 3ijp_A           94 DFSQ   97 (288)
T ss_dssp             ECSC
T ss_pred             EcCC
Confidence            8863

>2r00_A Aspartate-semialdehyde dehydrogenase; conformational change, half-OF-sites-reactivity, protein evolution, sequence homology; HET: HTI; 2.03A {Vibrio cholerae} PDB: 2qz9_A* 2r00_C*

Probab=97.60  E-value=0.00014  Score=64.07  Aligned_cols=69  Identities=22%  Similarity=0.229  Sum_probs=42.9

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCC---CeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcCCCcEEEECCC
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADN---HQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG  125 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g---~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~  125 (355)
                      +|||+|.||+|++|+.+++.|.+++   .+++++....+........     ...+.+.+.+.  ..++++|+||.|.+
T Consensus         3 ~~kV~I~GAtG~iG~~llr~L~~~~~p~~elv~i~s~~~~G~~~~~~-----~~~i~~~~~~~--~~~~~vDvVf~a~g   74 (336)
T 2r00_A            3 QFNVAIFGATGAVGETMLEVLQEREFPVDELFLLASERSEGKTYRFN-----GKTVRVQNVEE--FDWSQVHIALFSAG   74 (336)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTCCEEEEEEEECTTTTTCEEEET-----TEEEEEEEGGG--CCGGGCSEEEECSC
T ss_pred             ccEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEEECCCCCCCceeec-----CceeEEecCCh--HHhcCCCEEEECCC
Confidence            4799999999999999999999873   5777776422221111100     01122222211  13358999999976

>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A

Probab=97.60  E-value=2.9e-05  Score=64.90  Aligned_cols=72  Identities=11%  Similarity=0.098  Sum_probs=54.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhh-cCCCcEEEECCC
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDC-IQGSTAVVNLAG  125 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~-~~~~d~vi~~a~  125 (355)
                      ..++|+|+|+ |.+|+.+++.|.+.|+ |++++++++.........   .....|..+++.+.++ ++++|.||.+.+
T Consensus         8 ~~~~viI~G~-G~~G~~la~~L~~~g~-v~vid~~~~~~~~~~~~~---~~i~gd~~~~~~l~~a~i~~ad~vi~~~~   80 (234)
T 2aef_A            8 KSRHVVICGW-SESTLECLRELRGSEV-FVLAEDENVRKKVLRSGA---NFVHGDPTRVSDLEKANVRGARAVIVDLE   80 (234)
T ss_dssp             --CEEEEESC-CHHHHHHHHHSTTSEE-EEEESCGGGHHHHHHTTC---EEEESCTTCHHHHHHTTCTTCSEEEECCS
T ss_pred             CCCEEEEECC-ChHHHHHHHHHHhCCe-EEEEECCHHHHHHHhcCC---eEEEcCCCCHHHHHhcCcchhcEEEEcCC
Confidence            3468999996 9999999999999999 999999887654433111   1334577777888766 789999998864

>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}

Probab=97.59  E-value=0.00016  Score=64.20  Aligned_cols=71  Identities=15%  Similarity=0.204  Sum_probs=49.3

Q ss_pred             cccCCCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcCC---CcEEE
Q 018503           45 TQKASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQG---STAVV  121 (355)
Q Consensus        45 ~~~~~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~---~d~vi  121 (355)
                      +.|+.+|+|.|+| .|.+|..++..|.+.||+|++.+|++++...+....       +  ...+++.+++++   +|+||
T Consensus        17 ~~Mm~~mkIgiIG-lG~mG~~~A~~L~~~G~~V~v~dr~~~~~~~l~~~g-------~--~~~~s~~e~~~~a~~~DvVi   86 (358)
T 4e21_A           17 NLYFQSMQIGMIG-LGRMGADMVRRLRKGGHECVVYDLNVNAVQALEREG-------I--AGARSIEEFCAKLVKPRVVW   86 (358)
T ss_dssp             -----CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTT-------C--BCCSSHHHHHHHSCSSCEEE
T ss_pred             hhhhcCCEEEEEC-chHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHCC-------C--EEeCCHHHHHhcCCCCCEEE
Confidence            3445568999999 899999999999999999999999987766554321       1  112334444444   49999


Q ss_pred             ECCC
Q 018503          122 NLAG  125 (355)
Q Consensus       122 ~~a~  125 (355)
                      .+..
T Consensus        87 ~~vp   90 (358)
T 4e21_A           87 LMVP   90 (358)
T ss_dssp             ECSC
T ss_pred             EeCC
Confidence            8864

>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A

Probab=97.57  E-value=0.00062  Score=59.57  Aligned_cols=105  Identities=17%  Similarity=0.181  Sum_probs=65.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCC-eEEEEecCCchhhccCCCCC---CccCCCeeecCCcchhhhcCCCcEEEECC
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRSKAELIFPGKK---TRFFPGVMIAEEPQWRDCIQGSTAVVNLA  124 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~---~~~~~~~d~~~~~~~~~~~~~~d~vi~~a  124 (355)
                      ++|||.|+|+ |.+|..++..|+..|+ +|+.++++++..........   ........+....+. +.++++|+||.++
T Consensus         3 ~~~kI~VIGa-G~~G~~ia~~la~~g~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t~d~-~a~~~aDiVi~av   80 (317)
T 2ewd_A            3 ERRKIAVIGS-GQIGGNIAYIVGKDNLADVVLFDIAEGIPQGKALDITHSMVMFGSTSKVIGTDDY-ADISGSDVVIITA   80 (317)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEEESCG-GGGTTCSEEEECC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCchHHHHHHHHHHhhhhhcCCCcEEEECCCH-HHhCCCCEEEEeC
Confidence            3479999997 9999999999999998 99999998765443100000   000001122211234 5678999999999


Q ss_pred             CCCCCCCCChhhHHHHHHHhhhhHHHHHHHHHcC
Q 018503          125 GTPIGTRWSSEIKKEIKESRIRVTSKVVDLINES  158 (355)
Q Consensus       125 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~  158 (355)
                      +.+........   +....|....+.+++.+.+.
T Consensus        81 g~p~~~g~~r~---d~~~~~~~i~~~i~~~i~~~  111 (317)
T 2ewd_A           81 SIPGRPKDDRS---ELLFGNARILDSVAEGVKKY  111 (317)
T ss_dssp             CCSSCCSSCGG---GGHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCCcHH---HHHHhhHHHHHHHHHHHHHH
Confidence            86533222221   33455666677777777663

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}

Probab=97.57  E-value=3.7e-05  Score=67.96  Aligned_cols=75  Identities=16%  Similarity=0.066  Sum_probs=52.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchh---hhc--CCCcEEEEC
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWR---DCI--QGSTAVVNL  123 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~---~~~--~~~d~vi~~  123 (355)
                      ...+|+|+||+|.+|..+++.+...|++|++++|+.++.........   ...+|..+.+..+   +..  .++|+||++
T Consensus       145 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~~g~---~~~~d~~~~~~~~~i~~~~~~~~~d~vi~~  221 (333)
T 1wly_A          145 PGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKAETARKLGC---HHTINYSTQDFAEVVREITGGKGVDVVYDS  221 (333)
T ss_dssp             TTCEEEETTTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTC---SEEEETTTSCHHHHHHHHHTTCCEEEEEEC
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCC---CEEEECCCHHHHHHHHHHhCCCCCeEEEEC
Confidence            34689999999999999999999999999999998765443322111   1124544444332   333  268999999


Q ss_pred             CCC
Q 018503          124 AGT  126 (355)
Q Consensus       124 a~~  126 (355)
                      +|.
T Consensus       222 ~g~  224 (333)
T 1wly_A          222 IGK  224 (333)
T ss_dssp             SCT
T ss_pred             CcH
Confidence            973

>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*

Probab=97.54  E-value=0.00018  Score=63.03  Aligned_cols=110  Identities=15%  Similarity=0.174  Sum_probs=71.1

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCC--eEEEEecCCchhhc----cCCCCCCccCCCeeecCCcchhhhcCCCcEEEEC
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNH--QVRVLTRSRSKAEL----IFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNL  123 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~----~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~  123 (355)
                      +|||.|+|| |.+|..++-.|+..+.  +|..++++.++...    +....  .....+.+.. + -.++++++|+||..
T Consensus         9 ~~KI~IiGa-G~vG~~la~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~--~~~~~~~i~~-~-~~~a~~~aDvVii~   83 (326)
T 2zqz_A            9 HQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLSNAL--PFTSPKKIYS-A-EYSDAKDADLVVIT   83 (326)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTG--GGSCCCEEEE-C-CGGGGGGCSEEEEC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCCchHhHHHHHHHHHHH--HhcCCeEEEE-C-CHHHhCCCCEEEEc
Confidence            479999998 9999999999988775  89999997654322    11110  0012233332 2 24568899999999


Q ss_pred             CCCCCCCCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEE
Q 018503          124 AGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLV  168 (355)
Q Consensus       124 a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~  168 (355)
                      ++.+...   ...-.+....|+...+.+.+.+.+.+ ....++.+
T Consensus        84 ag~~~k~---g~~R~dl~~~n~~i~~~i~~~i~~~~-p~a~iiv~  124 (326)
T 2zqz_A           84 AGAPQKP---GETRLDLVNKNLKILKSIVDPIVDSG-FNGIFLVA  124 (326)
T ss_dssp             CCCC--------CHHHHHHHHHHHHHHHHHHHHHHT-CCSEEEEC
T ss_pred             CCCCCCC---CCCHHHHHHHHHHHHHHHHHHHHHHC-CCeEEEEe
Confidence            9874221   22234667889999999998888742 23344444

>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*

Probab=97.54  E-value=0.00018  Score=62.92  Aligned_cols=104  Identities=22%  Similarity=0.159  Sum_probs=66.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCC--eEEEEecCCchhhccCCC---CCCccCCCeeecCCcchhhhcCCCcEEEEC
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNH--QVRVLTRSRSKAELIFPG---KKTRFFPGVMIAEEPQWRDCIQGSTAVVNL  123 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~---~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~  123 (355)
                      ++|||.|+|+ |.+|..++..|+..|.  +|..++++.+........   ........+.+.. + -.+.++++|+||.+
T Consensus         5 ~~~kI~IIGa-G~vG~sla~~l~~~~~~~ev~l~Di~~~~~~~~~~dl~~~~~~~~~~~~i~~-~-~~~al~~aDvViia   81 (316)
T 1ldn_A            5 GGARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWH-G-DYDDCRDADLVVIC   81 (316)
T ss_dssp             TSCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEE-C-CGGGTTTCSEEEEC
T ss_pred             CCCEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEeCCcchHHHHHhhHHHHhhhcCCCeEEEc-C-cHHHhCCCCEEEEc
Confidence            3479999997 9999999999988764  899999986533211000   0000001223332 1 23568899999999


Q ss_pred             CCCCCCCCCChhhHHHHHHHhhhhHHHHHHHHHcC
Q 018503          124 AGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINES  158 (355)
Q Consensus       124 a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~  158 (355)
                      ++.+......   ..+....|....+.+++.+.+.
T Consensus        82 ~~~~~~~g~~---r~dl~~~n~~i~~~i~~~i~~~  113 (316)
T 1ldn_A           82 AGANQKPGET---RLDLVDKNIAIFRSIVESVMAS  113 (316)
T ss_dssp             CSCCCCTTTC---SGGGHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCCCC---HHHHHHcChHHHHHHHHHHHHH
Confidence            9875322111   1244567777788888888773

>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*

Probab=97.54  E-value=0.00031  Score=61.51  Aligned_cols=102  Identities=16%  Similarity=0.246  Sum_probs=65.8

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCC--eEEEEecCCchhh--ccC-CCCCCccCCCeeecCCcchhhhcCCCcEEEECC
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNH--QVRVLTRSRSKAE--LIF-PGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLA  124 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~--~~~-~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a  124 (355)
                      +|||.|+|+ |.+|..++..|...|+  +|+.++|+.+...  ... .... .......+...... +.++++|+||.++
T Consensus         7 ~mkI~IiGa-G~vG~~~a~~l~~~g~~~~V~l~d~~~~~~~~~~~~~~~~~-~~~~~~~v~~~~~~-~~~~~aD~Vii~v   83 (319)
T 1lld_A            7 PTKLAVIGA-GAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGS-SFYPTVSIDGSDDP-EICRDADMVVITA   83 (319)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTG-GGSTTCEEEEESCG-GGGTTCSEEEECC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHhhh-hhcCCeEEEeCCCH-HHhCCCCEEEECC
Confidence            479999997 9999999999999999  9999999864432  110 0000 00011222211122 4567899999998


Q ss_pred             CCCCCCCCChhhHHHHHHHhhhhHHHHHHHHHc
Q 018503          125 GTPIGTRWSSEIKKEIKESRIRVTSKVVDLINE  157 (355)
Q Consensus       125 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~  157 (355)
                      +.+...   .....+....|......+++.+..
T Consensus        84 ~~~~~~---g~~r~~~~~~n~~~~~~~~~~i~~  113 (319)
T 1lld_A           84 GPRQKP---GQSRLELVGATVNILKAIMPNLVK  113 (319)
T ss_dssp             CCCCCT---TCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCC---CCCHHHHHHHHHHHHHHHHHHHHH
Confidence            753221   122345677888888888887776

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*

Probab=97.54  E-value=5.3e-05  Score=67.54  Aligned_cols=75  Identities=13%  Similarity=0.061  Sum_probs=52.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchh---hhc--CCCcEEEEC
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWR---DCI--QGSTAVVNL  123 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~---~~~--~~~d~vi~~  123 (355)
                      ...+|+|+||+|.+|..+++.+...|.+|++++|++++.........   ...+|..+.+..+   +..  .++|+||++
T Consensus       162 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~g~---~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~  238 (354)
T 2j8z_A          162 AGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMAEKLGA---AAGFNYKKEDFSEATLKFTKGAGVNLILDC  238 (354)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTC---SEEEETTTSCHHHHHHHHTTTSCEEEEEES
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCC---cEEEecCChHHHHHHHHHhcCCCceEEEEC
Confidence            35689999999999999999999999999999998766544322111   1124444444332   333  268999999


Q ss_pred             CCC
Q 018503          124 AGT  126 (355)
Q Consensus       124 a~~  126 (355)
                      +|.
T Consensus       239 ~G~  241 (354)
T 2j8z_A          239 IGG  241 (354)
T ss_dssp             SCG
T ss_pred             CCc
Confidence            973

>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}

Probab=97.53  E-value=3.4e-05  Score=63.84  Aligned_cols=68  Identities=18%  Similarity=0.173  Sum_probs=48.3

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHhCCCeEEE-EecCCchhhccCCCCCCccCCCeeecCCcchhhhcCCCcEEEECC
Q 018503           48 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRV-LTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLA  124 (355)
Q Consensus        48 ~~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~-~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a  124 (355)
                      |++|||.|+| +|.+|..+++.|.+.|++|++ .+|++++...+....      .+...  ....+.++++|+||.+.
T Consensus        21 m~mmkI~IIG-~G~mG~~la~~l~~~g~~V~~v~~r~~~~~~~l~~~~------g~~~~--~~~~~~~~~aDvVilav   89 (220)
T 4huj_A           21 QSMTTYAIIG-AGAIGSALAERFTAAQIPAIIANSRGPASLSSVTDRF------GASVK--AVELKDALQADVVILAV   89 (220)
T ss_dssp             GGSCCEEEEE-CHHHHHHHHHHHHHTTCCEEEECTTCGGGGHHHHHHH------TTTEE--ECCHHHHTTSSEEEEES
T ss_pred             hcCCEEEEEC-CCHHHHHHHHHHHhCCCEEEEEECCCHHHHHHHHHHh------CCCcc--cChHHHHhcCCEEEEeC
Confidence            3457999999 899999999999999999999 888877655432210      01111  12223467899999886

>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}

Probab=97.50  E-value=0.0004  Score=60.31  Aligned_cols=100  Identities=19%  Similarity=0.276  Sum_probs=62.6

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhCCC--eEEEEecCCchhhc----cCCCCCCccCCCeeecCCcchhhhcCCCcEEEECC
Q 018503           51 MTVSVTGATGFIGRRLVQRLQADNH--QVRVLTRSRSKAEL----IFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLA  124 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~----~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a  124 (355)
                      |||.|+|+ |.+|..++..|+..|+  +|..++++.+....    +.....  ......+.. +.. +.++++|+||.++
T Consensus         1 mkI~VIGa-G~vG~~la~~la~~g~~~eV~L~D~~~~~~~~~~~~l~~~~~--~~~~~~i~~-~~~-~a~~~aDvVIi~~   75 (304)
T 2v6b_A            1 MKVGVVGT-GFVGSTAAFALVLRGSCSELVLVDRDEDRAQAEAEDIAHAAP--VSHGTRVWH-GGH-SELADAQVVILTA   75 (304)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHTTSCC--TTSCCEEEE-ECG-GGGTTCSEEEECC
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHhhhhhhh--hcCCeEEEE-CCH-HHhCCCCEEEEcC
Confidence            68999997 9999999999999999  99999998753321    111100  011223322 222 5688999999999


Q ss_pred             CCCCCCCCChhhHHHHHHHhhhhHHHHHHHHHcC
Q 018503          125 GTPIGTRWSSEIKKEIKESRIRVTSKVVDLINES  158 (355)
Q Consensus       125 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~  158 (355)
                      +.+...   .....+....|+...+.+++.+.+.
T Consensus        76 ~~~~~~---g~~r~dl~~~n~~i~~~i~~~i~~~  106 (304)
T 2v6b_A           76 GANQKP---GESRLDLLEKNADIFRELVPQITRA  106 (304)
T ss_dssp             ---------------CHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCC---CCcHHHHHHhHHHHHHHHHHHHHHh
Confidence            753211   1122345678888888888888773

>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}

Probab=97.50  E-value=0.00027  Score=62.06  Aligned_cols=104  Identities=16%  Similarity=0.204  Sum_probs=66.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCC-eEEEEecCCchhhccCCC---CCCccCCCeeecCCcchhhhcCCCcEEEECC
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRSKAELIFPG---KKTRFFPGVMIAEEPQWRDCIQGSTAVVNLA  124 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~---~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a  124 (355)
                      ++|||.|+|| |.+|..++..|+..|+ +|..++++.+........   ..........+.-..++ +.++++|+||-++
T Consensus        13 ~~~kI~ViGa-G~vG~~iA~~la~~g~~~V~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t~d~-~al~~aD~VI~av   90 (328)
T 2hjr_A           13 MRKKISIIGA-GQIGSTIALLLGQKDLGDVYMFDIIEGVPQGKALDLNHCMALIGSPAKIFGENNY-EYLQNSDVVIITA   90 (328)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEEESCG-GGGTTCSEEEECC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhHhhccCCCCEEEECCCH-HHHCCCCEEEEcC
Confidence            3479999997 9999999999999998 999999987654421100   00000001122222334 6688999999999


Q ss_pred             CCCCCCCCChhhHHHHHHHhhhhHHHHHHHHHc
Q 018503          125 GTPIGTRWSSEIKKEIKESRIRVTSKVVDLINE  157 (355)
Q Consensus       125 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~  157 (355)
                      +.+.......   .+....|+...+.+.+.+.+
T Consensus        91 g~p~k~g~tr---~dl~~~n~~i~~~i~~~i~~  120 (328)
T 2hjr_A           91 GVPRKPNMTR---SDLLTVNAKIVGSVAENVGK  120 (328)
T ss_dssp             SCCCCTTCCS---GGGHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCCch---hhHHhhhHHHHHHHHHHHHH
Confidence            8643211111   13445677778888887776

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*

Probab=97.49  E-value=8.2e-05  Score=66.40  Aligned_cols=72  Identities=18%  Similarity=0.110  Sum_probs=51.0

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhCCC-eEEEEecCCchhhccCC-CCCCccCCCeeecCCcc---hhhhcC-CCcEEEECC
Q 018503           51 MTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRSKAELIFP-GKKTRFFPGVMIAEEPQ---WRDCIQ-GSTAVVNLA  124 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~-~~~~~~~~~~d~~~~~~---~~~~~~-~~d~vi~~a  124 (355)
                      .+|||+||+|.+|..+++.+...|+ +|++++++.++...... ...   ...+|..+.+.   +.+... ++|+||+++
T Consensus       162 ~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~~~g~---~~~~d~~~~~~~~~~~~~~~~~~d~vi~~~  238 (357)
T 2zb4_A          162 KTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSELGF---DAAINYKKDNVAEQLRESCPAGVDVYFDNV  238 (357)
T ss_dssp             CEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTSCC---SEEEETTTSCHHHHHHHHCTTCEEEEEESC
T ss_pred             cEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcCC---ceEEecCchHHHHHHHHhcCCCCCEEEECC
Confidence            6899999999999999999999999 99999998765443322 111   11245444332   222222 689999998


Q ss_pred             C
Q 018503          125 G  125 (355)
Q Consensus       125 ~  125 (355)
                      |
T Consensus       239 G  239 (357)
T 2zb4_A          239 G  239 (357)
T ss_dssp             C
T ss_pred             C
Confidence            7

>3dr3_A N-acetyl-gamma-glutamyl-phosphate reductase; csgid target, ARGC, essential gene, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: MLT; 2.00A {Shigella flexneri} PDB: 2g17_A

Probab=97.49  E-value=0.0003  Score=61.67  Aligned_cols=73  Identities=21%  Similarity=0.286  Sum_probs=44.5

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhC-CCeEEEEecCC---chhhccC---CCCCCccCCCeeecCCcchhhhcCCCcEEEEC
Q 018503           51 MTVSVTGATGFIGRRLVQRLQAD-NHQVRVLTRSR---SKAELIF---PGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNL  123 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~-g~~V~~~~r~~---~~~~~~~---~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~  123 (355)
                      +||.|+||||++|+.|++.|.++ ++++..+.++.   +......   +...  ......+.+..+..++.+++|+||.|
T Consensus         5 ~kv~IvGatG~vG~~l~~~L~~~p~~el~~l~s~~~~~saGk~~~~~~p~~~--~~~~~~v~~~~~~~~~~~~~Dvvf~a   82 (337)
T 3dr3_A            5 LNTLIVGASGYAGAELVTYVNRHPHMNITALTVSAQSNDAGKLISDLHPQLK--GIVELPLQPMSDISEFSPGVDVVFLA   82 (337)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHCTTEEEEEEEEETTCTTTTSBHHHHCGGGT--TTCCCBEEEESSGGGTCTTCSEEEEC
T ss_pred             eEEEEECCCChHHHHHHHHHHhCCCCcEEEEEecCchhhcCCchHHhCcccc--CccceeEeccCCHHHHhcCCCEEEEC
Confidence            69999999999999999999985 57888876544   3222111   0000  01112222210223334789999988


Q ss_pred             CC
Q 018503          124 AG  125 (355)
Q Consensus       124 a~  125 (355)
                      .+
T Consensus        83 ~p   84 (337)
T 3dr3_A           83 TA   84 (337)
T ss_dssp             SC
T ss_pred             CC
Confidence            75

>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*

Probab=97.49  E-value=0.00016  Score=61.75  Aligned_cols=68  Identities=12%  Similarity=0.088  Sum_probs=52.7

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCC-eEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcCCCcEEEECCCC
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT  126 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~  126 (355)
                      .++++|+|+ |.+|++++..|.+.|. +|+++.|+.++...+...        +.....+++.+++.++|+||++...
T Consensus       117 ~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~--------~~~~~~~~~~~~~~~aDiVInaTp~  185 (277)
T 3don_A          117 DAYILILGA-GGASKGIANELYKIVRPTLTVANRTMSRFNNWSLN--------INKINLSHAESHLDEFDIIINTTPA  185 (277)
T ss_dssp             GCCEEEECC-SHHHHHHHHHHHTTCCSCCEEECSCGGGGTTCCSC--------CEEECHHHHHHTGGGCSEEEECCC-
T ss_pred             CCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHh--------cccccHhhHHHHhcCCCEEEECccC
Confidence            468999995 8999999999999998 999999998776654432        2333345566677889999999754

>2ep5_A 350AA long hypothetical aspartate-semialdehyde dehydrogenase; oxidoreductase, structural genomics, NPPSFA; 2.40A {Sulfolobus tokodaii}

Probab=97.49  E-value=0.00029  Score=62.44  Aligned_cols=33  Identities=24%  Similarity=0.537  Sum_probs=28.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCC-CeEEEEe
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADN-HQVRVLT   81 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g-~~V~~~~   81 (355)
                      +++||.|.||+|++|+.+++.|.++. .+|.++.
T Consensus         3 ~~~kV~IiGAtG~iG~~llr~L~~~p~~elvai~   36 (350)
T 2ep5_A            3 DKIKVSLLGSTGMVGQKMVKMLAKHPYLELVKVS   36 (350)
T ss_dssp             CCEEEEEESCSSHHHHHHHHHHTTCSSEEEEEEE
T ss_pred             CCcEEEEECcCCHHHHHHHHHHHhCCCcEEEEEe
Confidence            35799999999999999999998864 5888886

>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}

Probab=97.48  E-value=9.4e-05  Score=64.07  Aligned_cols=75  Identities=15%  Similarity=0.109  Sum_probs=54.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCC-eEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcCCCcEEEECCCCC
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTP  127 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~~  127 (355)
                      ..++|+|+|+ |.+|+.++..|.+.|. +|++++|+.++...+......  ... +..+.+++.+.+.++|+||++.+..
T Consensus       140 ~~~~vlVlGa-Gg~g~aia~~L~~~G~~~V~v~nR~~~ka~~la~~~~~--~~~-~~~~~~~~~~~~~~aDivIn~t~~~  215 (297)
T 2egg_A          140 DGKRILVIGA-GGGARGIYFSLLSTAAERIDMANRTVEKAERLVREGDE--RRS-AYFSLAEAETRLAEYDIIINTTSVG  215 (297)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHSCS--SSC-CEECHHHHHHTGGGCSEEEECSCTT
T ss_pred             CCCEEEEECc-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhhh--ccC-ceeeHHHHHhhhccCCEEEECCCCC
Confidence            3579999996 8899999999999997 999999998765544321100  000 2233345667778899999998753

>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}

Probab=97.47  E-value=8.7e-05  Score=64.61  Aligned_cols=68  Identities=12%  Similarity=0.063  Sum_probs=49.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcCCCcEEEECCC
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG  125 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~  125 (355)
                      ++|+|.|+| .|.+|..++..|.+.||+|++.+|++++...+.....      ..  -..+..++++++|+||-+..
T Consensus         6 ~~~~I~iIG-~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~------~~--~~~~~~e~~~~aDvvi~~vp   73 (303)
T 3g0o_A            6 TDFHVGIVG-LGSMGMGAARSCLRAGLSTWGADLNPQACANLLAEGA------CG--AAASAREFAGVVDALVILVV   73 (303)
T ss_dssp             -CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTC------SE--EESSSTTTTTTCSEEEECCS
T ss_pred             CCCeEEEEC-CCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHcCC------cc--ccCCHHHHHhcCCEEEEECC
Confidence            457999998 7999999999999999999999999876654433211      01  02334455667888887753

>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}

Probab=97.44  E-value=0.00016  Score=63.50  Aligned_cols=67  Identities=19%  Similarity=0.243  Sum_probs=52.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcCCCcEEEECCC
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG  125 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~  125 (355)
                      ++|+|.|+| .|.+|..+++.|.+.|++|++.+|++++...+....       +.  -.+++.++++++|+||-+..
T Consensus        30 ~~~~I~iIG-~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~l~~~g-------~~--~~~~~~e~~~~aDvVi~~vp   96 (320)
T 4dll_A           30 YARKITFLG-TGSMGLPMARRLCEAGYALQVWNRTPARAASLAALG-------AT--IHEQARAAARDADIVVSMLE   96 (320)
T ss_dssp             CCSEEEEEC-CTTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTT-------CE--EESSHHHHHTTCSEEEECCS
T ss_pred             CCCEEEEEC-ccHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHCC-------CE--eeCCHHHHHhcCCEEEEECC
Confidence            457999998 799999999999999999999999987766544321       22  23456677888999998864

>7mdh_A Protein (malate dehydrogenase); chloroplastic malate dehydrogenase (NADP+), activated by LIG chloroplastic malate dehydrogenase; 2.40A {Sorghum bicolor} SCOP: c.2.1.5 d.162.1.1 PDB: 1civ_A*

Probab=97.42  E-value=0.00036  Score=61.86  Aligned_cols=115  Identities=11%  Similarity=0.149  Sum_probs=70.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCC-----eEEEEecCCchh------h--ccCCCCCCccCCCeeecCCcchhhhcC
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNH-----QVRVLTRSRSKA------E--LIFPGKKTRFFPGVMIAEEPQWRDCIQ  115 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~-----~V~~~~r~~~~~------~--~~~~~~~~~~~~~~d~~~~~~~~~~~~  115 (355)
                      .++||.|+||+|.+|++++-.|+..+.     +|...+-+.+..      .  .+..... .....+.+.  ..-.+.++
T Consensus        31 ~~~KV~ViGAaG~VG~~la~~l~~~~l~~e~~~l~L~d~d~~~~~~~~~G~amDL~h~~~-p~~~~v~i~--~~~y~~~~  107 (375)
T 7mdh_A           31 KLVNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSLY-PLLREVSIG--IDPYEVFE  107 (375)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTC-TTEEEEEEE--SCHHHHTT
T ss_pred             CCCEEEEECCCChHHHHHHHHHHcCCcCCCCceeEEEecCccchhhhhHHHHHhHHhhhh-hhcCCcEEe--cCCHHHhC
Confidence            346999999999999999999998753     255544333221      1  1111100 001122332  23356788


Q ss_pred             CCcEEEECCCCCCCCCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEe
Q 018503          116 GSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVS  169 (355)
Q Consensus       116 ~~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~S  169 (355)
                      ++|+||.+||.+..   ....-.++++.|..-.+.+.+++.+.......++.+|
T Consensus       108 daDvVVitag~prk---pG~tR~DLl~~N~~I~k~i~~~i~~~a~p~~ivlVvs  158 (375)
T 7mdh_A          108 DVDWALLIGAKPRG---PGMERAALLDINGQIFADQGKALNAVASKNVKVLVVG  158 (375)
T ss_dssp             TCSEEEECCCCCCC---TTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECS
T ss_pred             CCCEEEEcCCCCCC---CCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEec
Confidence            99999999987422   2333568889999999999998876211223455544

>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*

Probab=97.41  E-value=0.00026  Score=64.88  Aligned_cols=75  Identities=27%  Similarity=0.389  Sum_probs=52.3

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCC-----------eeecCCcchhhhcCCCcE
Q 018503           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPG-----------VMIAEEPQWRDCIQGSTA  119 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~-----------~d~~~~~~~~~~~~~~d~  119 (355)
                      |||.|+| +|++|..++..|.+.||+|++++|++++...+.........+.           ..+.-..++.++++++|+
T Consensus         1 mkI~VIG-~G~vG~~~A~~la~~G~~V~~~d~~~~~~~~l~~~~~~i~e~~l~~~~~~~~~~g~l~~t~~~~~~~~~aDv   79 (436)
T 1mv8_A            1 MRISIFG-LGYVGAVCAGCLSARGHEVIGVDVSSTKIDLINQGKSPIVEPGLEALLQQGRQTGRLSGTTDFKKAVLDSDV   79 (436)
T ss_dssp             CEEEEEC-CSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEESCHHHHHHTCSE
T ss_pred             CEEEEEC-CCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHhCCCCCcCCCCHHHHHHhhcccCceEEeCCHHHHhccCCE
Confidence            6899999 7999999999999999999999998877655433211000000           012223345566778999


Q ss_pred             EEECCCC
Q 018503          120 VVNLAGT  126 (355)
Q Consensus       120 vi~~a~~  126 (355)
                      ||.+...
T Consensus        80 viiaVpt   86 (436)
T 1mv8_A           80 SFICVGT   86 (436)
T ss_dssp             EEECCCC
T ss_pred             EEEEcCC
Confidence            9999864

>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}

Probab=97.41  E-value=0.00023  Score=61.69  Aligned_cols=66  Identities=20%  Similarity=0.185  Sum_probs=46.5

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcCCCcEEEECCC
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG  125 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~  125 (355)
                      .+||.++| .|.+|..+++.|++.||+|++.+|++++...+...+       +.  -.++..++++++|+||-+..
T Consensus         5 s~kIgfIG-LG~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~G-------~~--~~~s~~e~~~~~dvvi~~l~   70 (297)
T 4gbj_A            5 SEKIAFLG-LGNLGTPIAEILLEAGYELVVWNRTASKAEPLTKLG-------AT--VVENAIDAITPGGIVFSVLA   70 (297)
T ss_dssp             CCEEEEEC-CSTTHHHHHHHHHHTTCEEEEC-------CTTTTTT-------CE--ECSSGGGGCCTTCEEEECCS
T ss_pred             CCcEEEEe-cHHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcC-------Ce--EeCCHHHHHhcCCceeeecc
Confidence            35899999 899999999999999999999999988776554432       12  23456677888999998864

>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6

Probab=97.38  E-value=0.00021  Score=63.65  Aligned_cols=77  Identities=10%  Similarity=0.032  Sum_probs=49.7

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCcc----CC-Ceee-cCCcchhhhcCCCcEEE
Q 018503           48 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRF----FP-GVMI-AEEPQWRDCIQGSTAVV  121 (355)
Q Consensus        48 ~~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~----~~-~~d~-~~~~~~~~~~~~~d~vi  121 (355)
                      |++|||+|+| +|.+|..++..|.+.|++|++++|+++....+........    .. ...+ ...+++.++++++|+||
T Consensus         2 m~~mki~iiG-~G~~G~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~vi   80 (359)
T 1bg6_A            2 IESKTYAVLG-LGNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLAVKDADVIL   80 (359)
T ss_dssp             --CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHTSEEEESSSCCEEECCSEEESCHHHHHTTCSEEE
T ss_pred             CCcCeEEEEC-CCHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHhcCCeEEeccccccccccceecCCHHHHHhcCCEEE
Confidence            3457999999 5999999999999999999999998765443321100000    00 0001 01234556677899999


Q ss_pred             ECCC
Q 018503          122 NLAG  125 (355)
Q Consensus       122 ~~a~  125 (355)
                      .+..
T Consensus        81 ~~v~   84 (359)
T 1bg6_A           81 IVVP   84 (359)
T ss_dssp             ECSC
T ss_pred             EeCC
Confidence            8875

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}

Probab=97.38  E-value=0.00011  Score=65.51  Aligned_cols=75  Identities=21%  Similarity=0.153  Sum_probs=53.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhh---c-CCCcEEEECC
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDC---I-QGSTAVVNLA  124 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~---~-~~~d~vi~~a  124 (355)
                      ...+|||+||+|.+|..+++.+...|.+|+++++++++.........   ...+|..+.+....+   . .++|+||+++
T Consensus       167 ~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lGa---~~~~~~~~~~~~~~~~~~~~~g~Dvvid~~  243 (353)
T 4dup_A          167 EGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEACERLGA---KRGINYRSEDFAAVIKAETGQGVDIILDMI  243 (353)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTC---SEEEETTTSCHHHHHHHHHSSCEEEEEESC
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCC---CEEEeCCchHHHHHHHHHhCCCceEEEECC
Confidence            45689999999999999999999999999999998876554332211   112344444322222   2 3799999998


Q ss_pred             CC
Q 018503          125 GT  126 (355)
Q Consensus       125 ~~  126 (355)
                      |.
T Consensus       244 g~  245 (353)
T 4dup_A          244 GA  245 (353)
T ss_dssp             CG
T ss_pred             CH
Confidence            73

>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1

Probab=97.38  E-value=0.0002  Score=62.49  Aligned_cols=112  Identities=15%  Similarity=0.121  Sum_probs=71.5

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCC--eEEEEecCCchhhcc----CCCCCCccCCCeeecCCcchhhhcCCCcEEEEC
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNH--QVRVLTRSRSKAELI----FPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNL  123 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~----~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~  123 (355)
                      .|||.|+|+ |.+|..++..|+..|.  +|..++++.+.....    .....  ......+.-..++++ ++++|+||-+
T Consensus        21 ~~kV~ViGa-G~vG~~~a~~la~~g~~~ev~L~Di~~~~~~g~a~DL~~~~~--~~~~~~i~~t~d~~~-~~daDiVIit   96 (330)
T 3ldh_A           21 YNKITVVGC-DAVGMADAISVLMKDLADEVALVDVMEDKLKGEMMDLEHGSL--FLHTAKIVSGKDYSV-SAGSKLVVIT   96 (330)
T ss_dssp             CCEEEEEST-THHHHHHHHHHHHHCCCSEEEEECSCHHHHHHHHHHHHHHGG--GSCCSEEEEESSSCS-CSSCSEEEEC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhhhh--cccCCeEEEcCCHHH-hCCCCEEEEe
Confidence            479999997 9999999999999886  999999976543221    00000  001112222223433 8899999999


Q ss_pred             CCCCCCCCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEe
Q 018503          124 AGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVS  169 (355)
Q Consensus       124 a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~S  169 (355)
                      ||.+....   ..-.+.+..|+...+.+.+.+.+. .....++.+|
T Consensus        97 aG~p~kpG---~tR~dll~~N~~I~k~i~~~I~k~-~P~a~ilvvt  138 (330)
T 3ldh_A           97 AGARQQEG---ESRLNLVQRNVNIFKFIIPNIVKH-SPDCLKELHP  138 (330)
T ss_dssp             CSCCCCSS---CCTTGGGHHHHHHHHHHHHHHHHH-CTTCEEEECS
T ss_pred             CCCCCCCC---CCHHHHHHhhHHHHHHHHHHHHhh-CCCceEEeCC
Confidence            99753221   122356678888888888888774 2223344444

>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}

Probab=97.37  E-value=0.0014  Score=59.88  Aligned_cols=75  Identities=20%  Similarity=0.335  Sum_probs=54.5

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCee-----------ecCCcchhhhcCCCcE
Q 018503           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVM-----------IAEEPQWRDCIQGSTA  119 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d-----------~~~~~~~~~~~~~~d~  119 (355)
                      -+|.|+| .|++|..++..|++.||+|++++|++++...+.........++++           +.-..++.++++++|+
T Consensus         9 ~~~~vIG-lG~vG~~~A~~La~~G~~V~~~D~~~~kv~~l~~g~~~~~epgl~~~~~~~~~~g~l~~ttd~~ea~~~aDv   87 (446)
T 4a7p_A            9 VRIAMIG-TGYVGLVSGACFSDFGHEVVCVDKDARKIELLHQNVMPIYEPGLDALVASNVKAGRLSFTTDLAEGVKDADA   87 (446)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCSTTHHHHTTTCCSSCCTTHHHHHHHHHHTTCEEEESCHHHHHTTCSE
T ss_pred             eEEEEEc-CCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHhcCCCCccCCCHHHHHHhhcccCCEEEECCHHHHHhcCCE
Confidence            4899999 899999999999999999999999998877665532100011111           1222456677889999


Q ss_pred             EEECCCC
Q 018503          120 VVNLAGT  126 (355)
Q Consensus       120 vi~~a~~  126 (355)
                      ||-+.+-
T Consensus        88 vii~Vpt   94 (446)
T 4a7p_A           88 VFIAVGT   94 (446)
T ss_dssp             EEECCCC
T ss_pred             EEEEcCC
Confidence            9998754

>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*

Probab=97.37  E-value=0.00039  Score=59.83  Aligned_cols=74  Identities=12%  Similarity=0.112  Sum_probs=51.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCC-------------CCCccCCCe-----eecCCcch
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-------------KKTRFFPGV-----MIAEEPQW  110 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-------------~~~~~~~~~-----d~~~~~~~  110 (355)
                      ..++|.|+| +|.+|+.++..|++.|++|++.+|+++........             ..  .....     .+.-.+++
T Consensus         3 ~~~kV~VIG-aG~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~--~~~~~~~~~~~i~~~~~~   79 (283)
T 4e12_A            3 GITNVTVLG-TGVLGSQIAFQTAFHGFAVTAYDINTDALDAAKKRFEGLAAVYEKEVAGA--ADGAAQKALGGIRYSDDL   79 (283)
T ss_dssp             SCCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHSTTC--TTTHHHHHHHHCEEESCH
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHhcccC--CHHHHHHHHcCeEEeCCH
Confidence            346999998 69999999999999999999999988764432211             00  00000     01123456


Q ss_pred             hhhcCCCcEEEECCC
Q 018503          111 RDCIQGSTAVVNLAG  125 (355)
Q Consensus       111 ~~~~~~~d~vi~~a~  125 (355)
                      .++++++|+||.+..
T Consensus        80 ~~~~~~aDlVi~av~   94 (283)
T 4e12_A           80 AQAVKDADLVIEAVP   94 (283)
T ss_dssp             HHHTTTCSEEEECCC
T ss_pred             HHHhccCCEEEEecc
Confidence            677889999999874

>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}

Probab=97.36  E-value=0.00018  Score=62.73  Aligned_cols=67  Identities=18%  Similarity=0.254  Sum_probs=51.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcCCCcEEEECCC
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG  125 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~  125 (355)
                      .+|+|.|+| .|.+|..++..|.+.||+|++.+|++++...+....       +.  -.++..++++++|+||-+..
T Consensus        20 ~m~~I~iIG-~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~l~~~g-------~~--~~~~~~~~~~~aDvvi~~vp   86 (310)
T 3doj_A           20 HMMEVGFLG-LGIMGKAMSMNLLKNGFKVTVWNRTLSKCDELVEHG-------AS--VCESPAEVIKKCKYTIAMLS   86 (310)
T ss_dssp             CSCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHHTT-------CE--ECSSHHHHHHHCSEEEECCS
T ss_pred             cCCEEEEEC-ccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCC-------Ce--EcCCHHHHHHhCCEEEEEcC
Confidence            347999998 799999999999999999999999987765543221       11  13455566777899988763

>3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus}

Probab=97.36  E-value=0.0005  Score=57.35  Aligned_cols=35  Identities=14%  Similarity=0.348  Sum_probs=29.2

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCCeEEE-EecCCc
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRV-LTRSRS   85 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~-~~r~~~   85 (355)
                      ||||.|+|+ |.+|+.+++.+.+.++++.+ ++|+..
T Consensus         3 MmkI~ViGa-GrMG~~i~~~l~~~~~eLva~~d~~~~   38 (243)
T 3qy9_A            3 SMKILLIGY-GAMNQRVARLAEEKGHEIVGVIENTPK   38 (243)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEEECSSCC
T ss_pred             ceEEEEECc-CHHHHHHHHHHHhCCCEEEEEEecCcc
Confidence            589999998 99999999999998778776 455543

>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*

Probab=97.36  E-value=0.00078  Score=56.24  Aligned_cols=73  Identities=22%  Similarity=0.248  Sum_probs=50.1

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhC-CCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhc-----CCCcEEEECC
Q 018503           51 MTVSVTGATGFIGRRLVQRLQAD-NHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCI-----QGSTAVVNLA  124 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~-----~~~d~vi~~a  124 (355)
                      |||+|+|++|.+|+.+++.+.+. ++++.++.........+....   .-.-+|++.++...+.+     .+.++|+-..
T Consensus         1 mkV~V~Ga~G~mG~~i~~~~~~~~~~elva~~d~~~dl~~~~~~~---~DvvIDfT~p~a~~~~~~~a~~~g~~~VigTT   77 (245)
T 1p9l_A            1 MRVGVLGAKGKVGTTMVRAVAAADDLTLSAELDAGDPLSLLTDGN---TEVVIDFTHPDVVMGNLEFLIDNGIHAVVGTT   77 (245)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHCTTCEEEEEECTTCCTHHHHHTT---CCEEEECSCTTTHHHHHHHHHHTTCEEEECCC
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEccCCCHHHHhccC---CcEEEEccChHHHHHHHHHHHHcCCCEEEcCC
Confidence            58999999999999999999876 899987765443322211100   02336888887665443     3788888776


Q ss_pred             CC
Q 018503          125 GT  126 (355)
Q Consensus       125 ~~  126 (355)
                      |.
T Consensus        78 G~   79 (245)
T 1p9l_A           78 GF   79 (245)
T ss_dssp             CC
T ss_pred             CC
Confidence            53

>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1

Probab=97.35  E-value=0.00047  Score=60.37  Aligned_cols=101  Identities=19%  Similarity=0.246  Sum_probs=65.9

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhCCC--eEEEEecCCchhhccCCCCC--CccCCCeeecCCcchhhhcCCCcEEEECCCC
Q 018503           51 MTVSVTGATGFIGRRLVQRLQADNH--QVRVLTRSRSKAELIFPGKK--TRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT  126 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~--~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~  126 (355)
                      |||.|+|+ |.+|..++..|+..|+  +|++++++++..........  ........+... + .+.++++|+||.+++.
T Consensus         1 mkI~VIGa-G~~G~~la~~l~~~g~~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~i~~~-d-~~~~~~aDvViiav~~   77 (319)
T 1a5z_A            1 MKIGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYAG-D-YADLKGSDVVIVAAGV   77 (319)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEEC-C-GGGGTTCSEEEECCCC
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHHHHHhhhhhcCCcEEEeC-C-HHHhCCCCEEEEccCC
Confidence            68999997 9999999999999999  99999998754332210000  000011122211 2 2457899999999876


Q ss_pred             CCCCCCChhhHHHHHHHhhhhHHHHHHHHHc
Q 018503          127 PIGTRWSSEIKKEIKESRIRVTSKVVDLINE  157 (355)
Q Consensus       127 ~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~  157 (355)
                      +...   .....++...|+...+.+++.+.+
T Consensus        78 ~~~~---g~~r~dl~~~n~~i~~~i~~~i~~  105 (319)
T 1a5z_A           78 PQKP---GETRLQLLGRNARVMKEIARNVSK  105 (319)
T ss_dssp             CCCS---SCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCC---CCCHHHHHHHHHHHHHHHHHHHHh
Confidence            4211   112345667788888888888876

>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}

Probab=97.35  E-value=0.00023  Score=60.58  Aligned_cols=67  Identities=12%  Similarity=0.143  Sum_probs=48.9

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCCe-EEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcCCCcEEEECCC
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNHQ-VRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG  125 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~~-V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~  125 (355)
                      +|+|.|+| +|.+|+.+++.|.+.|++ |.+++|+++.........      ++..  .+++.++++++|+||.+..
T Consensus        10 ~m~i~iiG-~G~mG~~~a~~l~~~g~~~v~~~~~~~~~~~~~~~~~------g~~~--~~~~~~~~~~~Dvvi~av~   77 (266)
T 3d1l_A           10 DTPIVLIG-AGNLATNLAKALYRKGFRIVQVYSRTEESARELAQKV------EAEY--TTDLAEVNPYAKLYIVSLK   77 (266)
T ss_dssp             GCCEEEEC-CSHHHHHHHHHHHHHTCCEEEEECSSHHHHHHHHHHT------TCEE--ESCGGGSCSCCSEEEECCC
T ss_pred             CCeEEEEc-CCHHHHHHHHHHHHCCCeEEEEEeCCHHHHHHHHHHc------CCce--eCCHHHHhcCCCEEEEecC
Confidence            47899999 599999999999999998 889999877654432210      1222  2344556778999998863

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D

Probab=97.35  E-value=0.0002  Score=62.29  Aligned_cols=74  Identities=22%  Similarity=0.148  Sum_probs=52.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcCCCcEEEECCCC
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT  126 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~  126 (355)
                      ...+|+|+||+|.+|...++.+...|.+|+++++++++.......+.   ...+|..+.+++.+.+.++|+||+ +|.
T Consensus       125 ~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga---~~~~~~~~~~~~~~~~~~~d~vid-~g~  198 (302)
T 1iz0_A          125 PGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPLALGA---EEAATYAEVPERAKAWGGLDLVLE-VRG  198 (302)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHHHTTC---SEEEEGGGHHHHHHHTTSEEEEEE-CSC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcCC---CEEEECCcchhHHHHhcCceEEEE-CCH
Confidence            34689999999999999999999999999999998776544332211   111333330334444478999999 873

>4dpl_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; HET: NAP; 1.90A {Sulfolobus tokodaii} PDB: 4dpk_A* 4dpm_A*

Probab=97.34  E-value=0.00026  Score=62.70  Aligned_cols=37  Identities=24%  Similarity=0.369  Sum_probs=29.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCC-CeEEEEecCCc
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADN-HQVRVLTRSRS   85 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~   85 (355)
                      +++||.|+||||++|..|++.|.++. .++..+....+
T Consensus         6 ~~~kVaIvGATGyvG~eLlrlL~~hP~~el~~l~S~~s   43 (359)
T 4dpl_A            6 RTLKAAILGATGLVGIEYVRMLSNHPYIKPAYLAGKGS   43 (359)
T ss_dssp             CCEEEEETTTTSTTHHHHHHHHTTCSSEEEEEEEESTT
T ss_pred             CCCeEEEECCCCHHHHHHHHHHHhCCCceEEEEECchh
Confidence            45699999999999999999887764 57777654433

>4dpk_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; 2.05A {Sulfolobus tokodaii} PDB: 4dpm_A*

Probab=97.34  E-value=0.00026  Score=62.70  Aligned_cols=37  Identities=24%  Similarity=0.369  Sum_probs=29.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCC-CeEEEEecCCc
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADN-HQVRVLTRSRS   85 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~   85 (355)
                      +++||.|+||||++|..|++.|.++. .++..+....+
T Consensus         6 ~~~kVaIvGATGyvG~eLlrlL~~hP~~el~~l~S~~s   43 (359)
T 4dpk_A            6 RTLKAAILGATGLVGIEYVRMLSNHPYIKPAYLAGKGS   43 (359)
T ss_dssp             CCEEEEETTTTSTTHHHHHHHHTTCSSEEEEEEEESTT
T ss_pred             CCCeEEEECCCCHHHHHHHHHHHhCCCceEEEEECchh
Confidence            45699999999999999999887764 57777654433

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}

Probab=97.34  E-value=0.00015  Score=64.32  Aligned_cols=74  Identities=18%  Similarity=0.038  Sum_probs=52.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCc---chhhhc--CCCcEEEEC
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEP---QWRDCI--QGSTAVVNL  123 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~---~~~~~~--~~~d~vi~~  123 (355)
                      ..++|||+||+|.+|..+++.+...|++|++++|++++.........   ...+|..+.+   .+.++.  .++|+||++
T Consensus       166 ~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~~ga---~~~~d~~~~~~~~~~~~~~~~~~~d~vi~~  242 (343)
T 2eih_A          166 PGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRAKALGA---DETVNYTHPDWPKEVRRLTGGKGADKVVDH  242 (343)
T ss_dssp             TTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTC---SEEEETTSTTHHHHHHHHTTTTCEEEEEES
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcCC---CEEEcCCcccHHHHHHHHhCCCCceEEEEC
Confidence            45789999999999999999999999999999998766544322111   1123444433   233333  268999999


Q ss_pred             CC
Q 018503          124 AG  125 (355)
Q Consensus       124 a~  125 (355)
                      +|
T Consensus       243 ~g  244 (343)
T 2eih_A          243 TG  244 (343)
T ss_dssp             SC
T ss_pred             CC
Confidence            98

>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*

Probab=97.33  E-value=0.00043  Score=64.07  Aligned_cols=76  Identities=18%  Similarity=0.248  Sum_probs=52.7

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCe-----------eecCCcchhhhcCCCc
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGV-----------MIAEEPQWRDCIQGST  118 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~-----------d~~~~~~~~~~~~~~d  118 (355)
                      .|||.|+| +|++|..++..|.+.||+|++++|++++...+.........+.+           .+.-..++.++++++|
T Consensus         8 ~~~I~VIG-~G~vG~~lA~~la~~G~~V~~~d~~~~~v~~l~~~~~~i~e~gl~~~l~~~~~~~~l~~ttd~~~a~~~aD   86 (478)
T 2y0c_A            8 SMNLTIIG-SGSVGLVTGACLADIGHDVFCLDVDQAKIDILNNGGVPIHEPGLKEVIARNRSAGRLRFSTDIEAAVAHGD   86 (478)
T ss_dssp             CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEECCHHHHHHHCS
T ss_pred             CceEEEEC-cCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHHhcccCCEEEECCHHHHhhcCC
Confidence            38999999 89999999999999999999999998776655433210001111           1111224445667899


Q ss_pred             EEEECCCC
Q 018503          119 AVVNLAGT  126 (355)
Q Consensus       119 ~vi~~a~~  126 (355)
                      +||-+...
T Consensus        87 vviiaVpt   94 (478)
T 2y0c_A           87 VQFIAVGT   94 (478)
T ss_dssp             EEEECCCC
T ss_pred             EEEEEeCC
Confidence            99998764

>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}

Probab=97.33  E-value=0.00019  Score=62.74  Aligned_cols=75  Identities=16%  Similarity=0.205  Sum_probs=48.6

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCcc------CCCeeecCCcchhhhcCCCcEEEEC
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRF------FPGVMIAEEPQWRDCIQGSTAVVNL  123 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~------~~~~d~~~~~~~~~~~~~~d~vi~~  123 (355)
                      +|||+|+| .|.+|..++..|.+.|++|++++|+++....+........      ...++..+.+++.+.++++|+||-+
T Consensus         3 ~m~i~iiG-~G~~G~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~   81 (316)
T 2ew2_A            3 AMKIAIAG-AGAMGSRLGIMLHQGGNDVTLIDQWPAHIEAIRKNGLIADFNGEEVVANLPIFSPEEIDHQNEQVDLIIAL   81 (316)
T ss_dssp             -CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHCEEEEETTEEEEECCCEECGGGCCTTSCCCSEEEEC
T ss_pred             CCeEEEEC-cCHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHhCCEEEEeCCCeeEecceeecchhhcccCCCCCEEEEE
Confidence            47999999 5999999999999999999999998765443322110000      0011222333333344589999988


Q ss_pred             CC
Q 018503          124 AG  125 (355)
Q Consensus       124 a~  125 (355)
                      ..
T Consensus        82 v~   83 (316)
T 2ew2_A           82 TK   83 (316)
T ss_dssp             SC
T ss_pred             ec
Confidence            63

>3pzr_A Aspartate-semialdehyde dehydrogenase; NADP, oxidoreductase-oxidoreductase inhibitor complex; HET: NAP; 1.75A {Vibrio cholerae} PDB: 1mc4_A 1mb4_A* 3q0e_A

Probab=97.33  E-value=0.0022  Score=56.84  Aligned_cols=69  Identities=17%  Similarity=0.190  Sum_probs=41.9

Q ss_pred             CEEEEEcCCchHHHHHHH-HHHhCC---CeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcCCCcEEEECCC
Q 018503           51 MTVSVTGATGFIGRRLVQ-RLQADN---HQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG  125 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~-~L~~~g---~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~  125 (355)
                      |||.|+||||++|+.+++ .|.++.   .++..++.+. .........    .....+.+.++.. .++++|+||.|++
T Consensus         1 ~~VaIvGATG~vG~ellr~lL~~hp~~~~~l~~~ss~~-aG~~~~~~~----~~~~~~~~~~~~~-~~~~~Dvvf~a~~   73 (370)
T 3pzr_A            1 MRVGLVGWRGMVGSVLMQRMVEERDFDLIEPVFFSTSQ-IGVPAPNFG----KDAGMLHDAFDIE-SLKQLDAVITCQG   73 (370)
T ss_dssp             CEEEEESCSSHHHHHHHHHHHHTTGGGGSEEEEEESSS-TTSBCCCSS----SCCCBCEETTCHH-HHTTCSEEEECSC
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCCCCceEEEEEeccc-cCcCHHHhC----CCceEEEecCChh-HhccCCEEEECCC
Confidence            689999999999999999 666666   3666654433 222221110    0012222222222 2578999999986

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*

Probab=97.32  E-value=0.00017  Score=63.73  Aligned_cols=74  Identities=16%  Similarity=0.067  Sum_probs=52.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcch---hhhc--CCCcEEEEC
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQW---RDCI--QGSTAVVNL  123 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~---~~~~--~~~d~vi~~  123 (355)
                      ...+|||+||+|.+|...++.+...|.+|+++++++++.........   ...+|..+.+..   .+..  .++|+||++
T Consensus       148 ~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga---~~~~~~~~~~~~~~~~~~~~~~g~D~vid~  224 (334)
T 3qwb_A          148 KGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLKIAKEYGA---EYLINASKEDILRQVLKFTNGKGVDASFDS  224 (334)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTC---SEEEETTTSCHHHHHHHHTTTSCEEEEEEC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCC---cEEEeCCCchHHHHHHHHhCCCCceEEEEC
Confidence            45689999999999999999999999999999998776554333221   112344444332   2333  268999999


Q ss_pred             CC
Q 018503          124 AG  125 (355)
Q Consensus       124 a~  125 (355)
                      +|
T Consensus       225 ~g  226 (334)
T 3qwb_A          225 VG  226 (334)
T ss_dssp             CG
T ss_pred             CC
Confidence            87

>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}

Probab=97.32  E-value=0.00013  Score=63.48  Aligned_cols=68  Identities=22%  Similarity=0.257  Sum_probs=51.9

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcCCCcEEEECCC
Q 018503           48 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG  125 (355)
Q Consensus        48 ~~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~  125 (355)
                      .++|+|.|+| .|.+|..+++.|.+.|++|++.+|++++...+....       +  ...++..++++++|+||-+..
T Consensus         7 ~~~~~IgiIG-~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~~g-------~--~~~~~~~e~~~~aDvVi~~vp   74 (306)
T 3l6d_A            7 SFEFDVSVIG-LGAMGTIMAQVLLKQGKRVAIWNRSPGKAAALVAAG-------A--HLCESVKAALSASPATIFVLL   74 (306)
T ss_dssp             CCSCSEEEEC-CSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHT-------C--EECSSHHHHHHHSSEEEECCS
T ss_pred             cCCCeEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHCC-------C--eecCCHHHHHhcCCEEEEEeC
Confidence            3457899998 899999999999999999999999987655443211       1  123456667778999998864

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*

Probab=97.31  E-value=0.00011  Score=64.57  Aligned_cols=74  Identities=15%  Similarity=0.028  Sum_probs=52.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcch---hhhcC--CCcEEEEC
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQW---RDCIQ--GSTAVVNL  123 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~---~~~~~--~~d~vi~~  123 (355)
                      ...+|||+||+|.+|...++.+...|.+|+++++++++.........   ...+|..+.+..   .+...  ++|+||++
T Consensus       140 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~Ga---~~~~~~~~~~~~~~~~~~~~~~g~Dvvid~  216 (325)
T 3jyn_A          140 PGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAAHAKALGA---WETIDYSHEDVAKRVLELTDGKKCPVVYDG  216 (325)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHTC---SEEEETTTSCHHHHHHHHTTTCCEEEEEES
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCC---CEEEeCCCccHHHHHHHHhCCCCceEEEEC
Confidence            45689999999999999999999999999999998776544332211   112344444333   23332  68999999


Q ss_pred             CC
Q 018503          124 AG  125 (355)
Q Consensus       124 a~  125 (355)
                      +|
T Consensus       217 ~g  218 (325)
T 3jyn_A          217 VG  218 (325)
T ss_dssp             SC
T ss_pred             CC
Confidence            87

>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}

Probab=97.31  E-value=0.0011  Score=61.11  Aligned_cols=75  Identities=17%  Similarity=0.128  Sum_probs=52.4

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHhC-CC-eEEEEecCCc----hhhccCCCCCCc--cC-------------CCeeecC
Q 018503           48 ASQMTVSVTGATGFIGRRLVQRLQAD-NH-QVRVLTRSRS----KAELIFPGKKTR--FF-------------PGVMIAE  106 (355)
Q Consensus        48 ~~~~~IlVtGatG~iG~~l~~~L~~~-g~-~V~~~~r~~~----~~~~~~~~~~~~--~~-------------~~~d~~~  106 (355)
                      +..|||.|+| +|++|..++..|++. || +|++++|+++    +...+.......  ..             ..+..++
T Consensus        16 ~~~mkIaVIG-lG~mG~~lA~~la~~~G~~~V~~~D~~~~~~~~kv~~l~~g~~~i~~~e~gl~~l~~~~~~~g~l~~tt   94 (478)
T 3g79_A           16 GPIKKIGVLG-MGYVGIPAAVLFADAPCFEKVLGFQRNSKSSGYKIEMLNRGESPLKGEEPGLEELIGKVVKAGKFECTP   94 (478)
T ss_dssp             CSCCEEEEEC-CSTTHHHHHHHHHHSTTCCEEEEECCCCTTTTTHHHHHTTTCCCSSCCGGGHHHHHHHHHHTTCEEEES
T ss_pred             CCCCEEEEEC-cCHHHHHHHHHHHHhCCCCeEEEEECChhHhHHHHHHHHhcCCCccccCCCHHHHHHhhcccCCeEEeC
Confidence            3458999999 899999999999999 99 9999999998    655544321100  00             0122221


Q ss_pred             CcchhhhcCCCcEEEECCCC
Q 018503          107 EPQWRDCIQGSTAVVNLAGT  126 (355)
Q Consensus       107 ~~~~~~~~~~~d~vi~~a~~  126 (355)
                        + .++++++|+||-+.+-
T Consensus        95 --d-~ea~~~aDvViiaVpt  111 (478)
T 3g79_A           95 --D-FSRISELDAVTLAIQT  111 (478)
T ss_dssp             --C-GGGGGGCSEEEECCCC
T ss_pred             --c-HHHHhcCCEEEEecCC
Confidence              2 3567789999998764

>3uw3_A Aspartate-semialdehyde dehydrogenase; structural genomics, seattle structural genomics center for infectious disease (ssgcid); 1.55A {Burkholderia thailandensis}

Probab=97.31  E-value=0.0021  Score=57.15  Aligned_cols=70  Identities=13%  Similarity=0.179  Sum_probs=42.3

Q ss_pred             CCEEEEEcCCchHHHHHHH-HHHhCC---CeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcCCCcEEEECCC
Q 018503           50 QMTVSVTGATGFIGRRLVQ-RLQADN---HQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG  125 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~-~L~~~g---~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~  125 (355)
                      +|+|.|+||||++|+.|++ .|.++.   .++..++.+ +.........    .....+.+.++.. .++++|+||.|++
T Consensus         4 ~~~VaIvGATG~vG~ellr~lL~~hp~~~~~l~~~ss~-~aG~~~~~~~----~~~~~v~~~~~~~-~~~~vDvvf~a~~   77 (377)
T 3uw3_A            4 SMNVGLVGWRGMVGSVLMQRMQEEGDFDLIEPVFFSTS-NAGGKAPSFA----KNETTLKDATSID-DLKKCDVIITCQG   77 (377)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESS-CTTSBCCTTC----CSCCBCEETTCHH-HHHTCSEEEECSC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhhCCCCceEEEEEech-hcCCCHHHcC----CCceEEEeCCChh-HhcCCCEEEECCC
Confidence            4799999999999999999 666666   366666543 3222221110    0011222222222 2468999999986

>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*

Probab=97.30  E-value=0.00045  Score=62.61  Aligned_cols=73  Identities=14%  Similarity=0.038  Sum_probs=56.7

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhh-cCCCcEEEECCC
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDC-IQGSTAVVNLAG  125 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~-~~~~d~vi~~a~  125 (355)
                      .|+|+|+| .|.+|+.+++.|.+.|++|++++++++..........  .....|..+++.+.++ +.++|+||.+..
T Consensus         4 ~~~viIiG-~Gr~G~~va~~L~~~g~~vvvId~d~~~v~~~~~~g~--~vi~GDat~~~~L~~agi~~A~~viv~~~   77 (413)
T 3l9w_A            4 GMRVIIAG-FGRFGQITGRLLLSSGVKMVVLDHDPDHIETLRKFGM--KVFYGDATRMDLLESAGAAKAEVLINAID   77 (413)
T ss_dssp             CCSEEEEC-CSHHHHHHHHHHHHTTCCEEEEECCHHHHHHHHHTTC--CCEESCTTCHHHHHHTTTTTCSEEEECCS
T ss_pred             CCeEEEEC-CCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHhCCC--eEEEcCCCCHHHHHhcCCCccCEEEECCC
Confidence            36899999 5999999999999999999999999887654432211  1233577788888776 678999998864

>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*

Probab=97.30  E-value=0.00024  Score=63.69  Aligned_cols=75  Identities=16%  Similarity=0.080  Sum_probs=55.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCC-CCCCccCCCeeecCCcchhhhcCCCcEEEECCCCC
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP-GKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTP  127 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~~  127 (355)
                      .+++|+|+|+ |.+|+.+++.+...|.+|++++|++.+...... ...   ....+..+.+.+.+.++++|+||.+++.+
T Consensus       167 ~g~~V~ViG~-G~iG~~~a~~a~~~Ga~V~~~d~~~~~l~~~~~~~g~---~~~~~~~~~~~l~~~l~~aDvVi~~~~~p  242 (377)
T 2vhw_A          167 EPADVVVIGA-GTAGYNAARIANGMGATVTVLDINIDKLRQLDAEFCG---RIHTRYSSAYELEGAVKRADLVIGAVLVP  242 (377)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTT---SSEEEECCHHHHHHHHHHCSEEEECCCCT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhcCC---eeEeccCCHHHHHHHHcCCCEEEECCCcC
Confidence            4579999997 999999999999999999999998876443321 110   11123334556777788999999998754

>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6

Probab=97.28  E-value=0.00055  Score=59.34  Aligned_cols=53  Identities=15%  Similarity=0.235  Sum_probs=42.7

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcCCCcEEEECC
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLA  124 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a  124 (355)
                      +++|.|+||.|.+|..++..|.+.|++|++++|++..                      +..++++++|+||.+.
T Consensus        21 ~~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~~~----------------------~~~~~~~~aDvVilav   73 (298)
T 2pv7_A           21 IHKIVIVGGYGKLGGLFARYLRASGYPISILDREDWA----------------------VAESILANADVVIVSV   73 (298)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCGG----------------------GHHHHHTTCSEEEECS
T ss_pred             CCEEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCccc----------------------CHHHHhcCCCEEEEeC
Confidence            4689999999999999999999999999999887531                      2334556777777765

>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A

Probab=97.28  E-value=0.00017  Score=61.90  Aligned_cols=77  Identities=19%  Similarity=0.163  Sum_probs=55.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCC-eEEEEecCCchhhccCCCCCCc-cCCCeeecCCcchhhhcCCCcEEEECCCC
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRSKAELIFPGKKTR-FFPGVMIAEEPQWRDCIQGSTAVVNLAGT  126 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~-~~~~~d~~~~~~~~~~~~~~d~vi~~a~~  126 (355)
                      ..++++|+|+ |.+|++++..|.+.|. +|++++|+.++...+....... ....+...+.+++.+.+.++|+||++...
T Consensus       126 ~~k~vlVlGa-GG~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~i~~~~~~~l~~~l~~~DiVInaTp~  204 (283)
T 3jyo_A          126 KLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVVGVDARGIEDVIAAADGVVNATPM  204 (283)
T ss_dssp             CCSEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHHTSCCEEEECSTTHHHHHHHSSEEEECSST
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEcCHHHHHHHHhcCCEEEECCCC
Confidence            3578999996 9999999999999998 7999999987765442210000 01123344556777778889999999764

>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A

Probab=97.28  E-value=0.00091  Score=58.18  Aligned_cols=109  Identities=21%  Similarity=0.266  Sum_probs=71.9

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhCC--CeEEEEecCCchhhc----cCCCCCCccCCCeeecCCcchhhhcCCCcEEEECC
Q 018503           51 MTVSVTGATGFIGRRLVQRLQADN--HQVRVLTRSRSKAEL----IFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLA  124 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~----~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a  124 (355)
                      |||.|+|| |.+|..++-.|+..+  .+|..++++.++...    +....  .....+.+.. +. .++++++|+||.++
T Consensus         1 ~KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~k~~g~a~dl~~~~--~~~~~~~v~~-~~-~~a~~~aD~Vii~a   75 (310)
T 2xxj_A            1 MKVGIVGS-GMVGSATAYALALLGVAREVVLVDLDRKLAQAHAEDILHAT--PFAHPVWVWA-GS-YGDLEGARAVVLAA   75 (310)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHTTG--GGSCCCEEEE-CC-GGGGTTEEEEEECC
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHHhH--hhcCCeEEEE-CC-HHHhCCCCEEEECC
Confidence            68999997 999999999999886  689999998654432    11110  0011233332 22 45688999999999


Q ss_pred             CCCCCCCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEE
Q 018503          125 GTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLV  168 (355)
Q Consensus       125 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~  168 (355)
                      +.+...   ...-.+....|+...+.+.+.+.+. .....++.+
T Consensus        76 g~~~~~---g~~r~dl~~~n~~i~~~i~~~i~~~-~p~a~iiv~  115 (310)
T 2xxj_A           76 GVAQRP---GETRLQLLDRNAQVFAQVVPRVLEA-APEAVLLVA  115 (310)
T ss_dssp             CCCCCT---TCCHHHHHHHHHHHHHHHHHHHHHH-CTTCEEEEC
T ss_pred             CCCCCC---CcCHHHHHHhhHHHHHHHHHHHHHH-CCCcEEEEe
Confidence            875322   1223466788999999999888874 222344444

>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*

Probab=97.28  E-value=0.00014  Score=62.28  Aligned_cols=74  Identities=15%  Similarity=0.135  Sum_probs=49.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcCCCcEEEECCCCC
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTP  127 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~~  127 (355)
                      ..++|+|+|+ |.+|++++..|++.|++|++++|+.++...+......  ...++..+.+++.+  .++|+||++++..
T Consensus       118 ~~~~vlvlGa-Gg~g~a~a~~L~~~G~~v~v~~R~~~~a~~l~~~~~~--~~~~~~~~~~~~~~--~~~DivIn~t~~~  191 (272)
T 1p77_A          118 PNQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQP--YGNIQAVSMDSIPL--QTYDLVINATSAG  191 (272)
T ss_dssp             TTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGG--GSCEEEEEGGGCCC--SCCSEEEECCCC-
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHccc--cCCeEEeeHHHhcc--CCCCEEEECCCCC
Confidence            3579999997 8899999999999999999999998765544321000  00122222222211  3799999999753

>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6

Probab=97.26  E-value=0.00017  Score=62.59  Aligned_cols=66  Identities=12%  Similarity=0.215  Sum_probs=48.9

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcCCCcEEEECCC
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG  125 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~  125 (355)
                      +|+|.|+| +|.+|..++..|.+.|++|++++|+++....+....       +..  .++..++++++|+||.+..
T Consensus         5 ~m~i~iiG-~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g-------~~~--~~~~~~~~~~~D~vi~~v~   70 (299)
T 1vpd_A            5 TMKVGFIG-LGIMGKPMSKNLLKAGYSLVVSDRNPEAIADVIAAG-------AET--ASTAKAIAEQCDVIITMLP   70 (299)
T ss_dssp             -CEEEEEC-CSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTT-------CEE--CSSHHHHHHHCSEEEECCS
T ss_pred             cceEEEEC-chHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHCC-------Cee--cCCHHHHHhCCCEEEEECC
Confidence            47999999 799999999999999999999999877654433211       111  2345555667899998864

>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8

Probab=97.26  E-value=0.0023  Score=48.39  Aligned_cols=61  Identities=15%  Similarity=0.207  Sum_probs=44.3

Q ss_pred             CCEEEEEcCC---chHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcCCCcEEEECC
Q 018503           50 QMTVSVTGAT---GFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLA  124 (355)
Q Consensus        50 ~~~IlVtGat---G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a  124 (355)
                      +++|.|+|+|   |.+|..+++.|++.|++|+.++.+...   .         .++.  -..++.++.+++|+++-+.
T Consensus        14 p~~IavIGaS~~~g~~G~~~~~~L~~~G~~V~~vnp~~~~---i---------~G~~--~~~s~~el~~~vDlvii~v   77 (138)
T 1y81_A           14 FRKIALVGASKNPAKYGNIILKDLLSKGFEVLPVNPNYDE---I---------EGLK--CYRSVRELPKDVDVIVFVV   77 (138)
T ss_dssp             CCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSE---E---------TTEE--CBSSGGGSCTTCCEEEECS
T ss_pred             CCeEEEEeecCCCCCHHHHHHHHHHHCCCEEEEeCCCCCe---E---------CCee--ecCCHHHhCCCCCEEEEEe
Confidence            4689999987   899999999999999998877765322   1         1122  2334555566799999875

>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}

Probab=97.25  E-value=0.00028  Score=60.82  Aligned_cols=65  Identities=15%  Similarity=0.226  Sum_probs=50.5

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcCCCcEEEECCC
Q 018503           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG  125 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~  125 (355)
                      |+|.|+| .|.+|..++..|.+.||+|++.+|++++...+....       +  .-.+++.++++++|+||-+..
T Consensus         2 ~~i~iIG-~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g-------~--~~~~~~~~~~~~aDvvi~~vp   66 (287)
T 3pef_A            2 QKFGFIG-LGIMGSAMAKNLVKAGCSVTIWNRSPEKAEELAALG-------A--ERAATPCEVVESCPVTFAMLA   66 (287)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHHTT-------C--EECSSHHHHHHHCSEEEECCS
T ss_pred             CEEEEEe-ecHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCC-------C--eecCCHHHHHhcCCEEEEEcC
Confidence            7899999 799999999999999999999999987765543321       1  123456666778899998863

>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}

Probab=97.25  E-value=0.00023  Score=59.82  Aligned_cols=68  Identities=28%  Similarity=0.415  Sum_probs=48.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCch--------------hhccCCCCCCccCCCeeecCCcchhhhc
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSK--------------AELIFPGKKTRFFPGVMIAEEPQWRDCI  114 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~--------------~~~~~~~~~~~~~~~~d~~~~~~~~~~~  114 (355)
                      ..|+|.|+| +|.+|.++++.|.+.||+|++.+|+++.              ...+...     ...   ....+..+++
T Consensus        18 ~~~kIgiIG-~G~mG~alA~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~---~~~~~~~e~~   88 (245)
T 3dtt_A           18 QGMKIAVLG-TGTVGRTMAGALADLGHEVTIGTRDPKATLARAEPDAMGAPPFSQWLPE-----HPH---VHLAAFADVA   88 (245)
T ss_dssp             -CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCHHHHHTCC-------CCHHHHGGG-----STT---CEEEEHHHHH
T ss_pred             CCCeEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCChhhhhhhhhhhhhcchhhhHHHhh-----cCc---eeccCHHHHH
Confidence            458999998 8999999999999999999999998775              1111110     001   1124555667


Q ss_pred             CCCcEEEECCC
Q 018503          115 QGSTAVVNLAG  125 (355)
Q Consensus       115 ~~~d~vi~~a~  125 (355)
                      +++|+||.+..
T Consensus        89 ~~aDvVilavp   99 (245)
T 3dtt_A           89 AGAELVVNATE   99 (245)
T ss_dssp             HHCSEEEECSC
T ss_pred             hcCCEEEEccC
Confidence            78999998864

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*

Probab=97.24  E-value=0.00024  Score=63.06  Aligned_cols=75  Identities=20%  Similarity=0.139  Sum_probs=53.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhC-CCeEEEEecCCchhhccCCCCCCccCCCeeecCCcc---hhhhc--CCCcEEEE
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQAD-NHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQ---WRDCI--QGSTAVVN  122 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~---~~~~~--~~~d~vi~  122 (355)
                      ...+|||+||+|.+|..+++.+... |.+|+++++++++.........   ...+|..+.+.   +.++.  .++|+||+
T Consensus       170 ~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~~~~g~---~~~~~~~~~~~~~~~~~~~~~~~~d~vi~  246 (347)
T 1jvb_A          170 PTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGA---DYVINASMQDPLAEIRRITESKGVDAVID  246 (347)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHHHTC---SEEEETTTSCHHHHHHHHTTTSCEEEEEE
T ss_pred             CCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCC---CEEecCCCccHHHHHHHHhcCCCceEEEE
Confidence            3468999999999999999999998 9999999998766543322111   11234444443   34444  36899999


Q ss_pred             CCCC
Q 018503          123 LAGT  126 (355)
Q Consensus       123 ~a~~  126 (355)
                      ++|.
T Consensus       247 ~~g~  250 (347)
T 1jvb_A          247 LNNS  250 (347)
T ss_dssp             SCCC
T ss_pred             CCCC
Confidence            9984

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}

Probab=97.23  E-value=0.00022  Score=63.12  Aligned_cols=75  Identities=17%  Similarity=0.173  Sum_probs=52.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcch---hhhc--CCCcEEEEC
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQW---RDCI--QGSTAVVNL  123 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~---~~~~--~~~d~vi~~  123 (355)
                      ...+|||+||+|.+|...++.+...|.+|+++++++++.........   ...+|..+.+..   .+..  .++|+||++
T Consensus       144 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lga---~~~~~~~~~~~~~~~~~~~~~~g~Dvvid~  220 (340)
T 3gms_A          144 RNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEELLRLGA---AYVIDTSTAPLYETVMELTNGIGADAAIDS  220 (340)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHHTC---SEEEETTTSCHHHHHHHHTTTSCEEEEEES
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhCCC---cEEEeCCcccHHHHHHHHhCCCCCcEEEEC
Confidence            45689999999999999999998899999999998876554433211   112344443322   2333  268999999


Q ss_pred             CCC
Q 018503          124 AGT  126 (355)
Q Consensus       124 a~~  126 (355)
                      +|.
T Consensus       221 ~g~  223 (340)
T 3gms_A          221 IGG  223 (340)
T ss_dssp             SCH
T ss_pred             CCC
Confidence            873

>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A

Probab=97.23  E-value=0.00051  Score=58.79  Aligned_cols=68  Identities=18%  Similarity=0.231  Sum_probs=52.7

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcCCCcEEEECCCC
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT  126 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~  126 (355)
                      .|+|+|+| +|.+|++++..|.+.|++|++++|+.++...+....      +++..+  ++.+.++++|+||++...
T Consensus       129 ~~~v~iiG-aG~~g~aia~~L~~~g~~V~v~~r~~~~~~~l~~~~------g~~~~~--~~~~~~~~aDiVi~atp~  196 (275)
T 2hk9_A          129 EKSILVLG-AGGASRAVIYALVKEGAKVFLWNRTKEKAIKLAQKF------PLEVVN--SPEEVIDKVQVIVNTTSV  196 (275)
T ss_dssp             GSEEEEEC-CSHHHHHHHHHHHHHTCEEEEECSSHHHHHHHTTTS------CEEECS--CGGGTGGGCSEEEECSST
T ss_pred             CCEEEEEC-chHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHc------CCeeeh--hHHhhhcCCCEEEEeCCC
Confidence            47999999 599999999999999999999999987666554321      233332  455667789999999864

>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}

Probab=97.23  E-value=0.00031  Score=60.25  Aligned_cols=67  Identities=22%  Similarity=0.253  Sum_probs=51.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCC---eEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcCCCcEEEECC
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNH---QVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLA  124 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a  124 (355)
                      ++|+|.|+| +|.+|..++..|.+.|+   +|++.+|++++...+....      ++..  ..+..++++++|+||-+.
T Consensus         2 ~~~~I~iIG-~G~mG~aia~~l~~~g~~~~~V~v~dr~~~~~~~l~~~~------gi~~--~~~~~~~~~~aDvVilav   71 (280)
T 3tri_A            2 NTSNITFIG-GGNMARNIVVGLIANGYDPNRICVTNRSLDKLDFFKEKC------GVHT--TQDNRQGALNADVVVLAV   71 (280)
T ss_dssp             CCSCEEEES-CSHHHHHHHHHHHHTTCCGGGEEEECSSSHHHHHHHHTT------CCEE--ESCHHHHHSSCSEEEECS
T ss_pred             CCCEEEEEc-ccHHHHHHHHHHHHCCCCCCeEEEEeCCHHHHHHHHHHc------CCEE--eCChHHHHhcCCeEEEEe
Confidence            347899999 59999999999999999   9999999988766544321      1222  234556778899999886

>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}

Probab=97.23  E-value=0.00024  Score=61.70  Aligned_cols=67  Identities=9%  Similarity=0.137  Sum_probs=49.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcCCCcEEEECCC
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG  125 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~  125 (355)
                      .+|+|.|+| .|.+|..++..|.+.|++|++++|+++....+....       +..  .++..++++++|+||.+..
T Consensus         3 ~~~~i~iiG-~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g-------~~~--~~~~~~~~~~~D~vi~~vp   69 (301)
T 3cky_A            3 KSIKIGFIG-LGAMGKPMAINLLKEGVTVYAFDLMEANVAAVVAQG-------AQA--CENNQKVAAASDIIFTSLP   69 (301)
T ss_dssp             -CCEEEEEC-CCTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHTTT-------CEE--CSSHHHHHHHCSEEEECCS
T ss_pred             CCCEEEEEC-ccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCC-------Cee--cCCHHHHHhCCCEEEEECC
Confidence            347999999 799999999999999999999999877655443221       121  2344555667899888863

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*

Probab=97.22  E-value=0.00052  Score=61.36  Aligned_cols=74  Identities=16%  Similarity=0.153  Sum_probs=54.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccC-CCCCCccCCCeeecCCcchhhhcCCCcEEEECCCC
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIF-PGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT  126 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~  126 (355)
                      ...+|||+|+ |.+|...++.+...|.+|+++++++++..... ..+.   ...+|..+.+.+.++..++|+||+++|.
T Consensus       187 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~lGa---~~v~~~~~~~~~~~~~~~~D~vid~~g~  261 (366)
T 1yqd_A          187 PGKHIGIVGL-GGLGHVAVKFAKAFGSKVTVISTSPSKKEEALKNFGA---DSFLVSRDQEQMQAAAGTLDGIIDTVSA  261 (366)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGHHHHHHTSCC---SEEEETTCHHHHHHTTTCEEEEEECCSS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCC---ceEEeccCHHHHHHhhCCCCEEEECCCc
Confidence            3468999995 99999999999999999999999887654433 2221   1123444545566666789999999884

>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A

Probab=97.22  E-value=0.0002  Score=60.76  Aligned_cols=67  Identities=15%  Similarity=0.212  Sum_probs=49.6

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcCCCcEEEECCC
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG  125 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~  125 (355)
                      +|+|.|+| +|.+|+.+++.|.+.|++|.+.+|+++....+...     + ++.  -..++.++++++|+||.+..
T Consensus         3 ~m~i~iiG-~G~mG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~-----~-g~~--~~~~~~~~~~~~D~Vi~~v~   69 (259)
T 2ahr_A            3 AMKIGIIG-VGKMASAIIKGLKQTPHELIISGSSLERSKEIAEQ-----L-ALP--YAMSHQDLIDQVDLVILGIK   69 (259)
T ss_dssp             CCEEEEEC-CSHHHHHHHHHHTTSSCEEEEECSSHHHHHHHHHH-----H-TCC--BCSSHHHHHHTCSEEEECSC
T ss_pred             ccEEEEEC-CCHHHHHHHHHHHhCCCeEEEECCCHHHHHHHHHH-----c-CCE--eeCCHHHHHhcCCEEEEEeC
Confidence            47999999 79999999999999999999999987765443211     0 111  12345566678999998864

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*

Probab=97.22  E-value=0.00026  Score=63.20  Aligned_cols=74  Identities=20%  Similarity=0.124  Sum_probs=50.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCc---chhhhc-CCCcEEEECC
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEP---QWRDCI-QGSTAVVNLA  124 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~---~~~~~~-~~~d~vi~~a  124 (355)
                      ...+|||+||+|.+|..+++.+...|.+|+++++++++.......+.   ...+|..+.+   .+.+.. .++|+||+++
T Consensus       163 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~Ga---~~~~~~~~~~~~~~~~~~~~~g~D~vid~~  239 (362)
T 2c0c_A          163 EGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLKSLGC---DRPINYKTEPVGTVLKQEYPEGVDVVYESV  239 (362)
T ss_dssp             TTCEEEETTTTBTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTC---SEEEETTTSCHHHHHHHHCTTCEEEEEECS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHcCC---cEEEecCChhHHHHHHHhcCCCCCEEEECC
Confidence            34689999999999999999999999999999998765443332211   1113333322   122222 3689999998


Q ss_pred             C
Q 018503          125 G  125 (355)
Q Consensus       125 ~  125 (355)
                      |
T Consensus       240 g  240 (362)
T 2c0c_A          240 G  240 (362)
T ss_dssp             C
T ss_pred             C
Confidence            7

>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}

Probab=97.19  E-value=0.00015  Score=61.04  Aligned_cols=66  Identities=9%  Similarity=0.122  Sum_probs=49.8

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCC----eEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcCCCcEEEECC
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNH----QVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLA  124 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~----~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a  124 (355)
                      +|||.|+| +|.+|..+++.|.+.|+    +|++.+|++++...+...      .++..  .++..++++++|+||-+.
T Consensus         2 ~~~i~iIG-~G~mG~~~a~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~------~g~~~--~~~~~e~~~~aDvVilav   71 (247)
T 3gt0_A            2 DKQIGFIG-CGNMGMAMIGGMINKNIVSSNQIICSDLNTANLKNASEK------YGLTT--TTDNNEVAKNADILILSI   71 (247)
T ss_dssp             CCCEEEEC-CSHHHHHHHHHHHHTTSSCGGGEEEECSCHHHHHHHHHH------HCCEE--CSCHHHHHHHCSEEEECS
T ss_pred             CCeEEEEC-ccHHHHHHHHHHHhCCCCCCCeEEEEeCCHHHHHHHHHH------hCCEE--eCChHHHHHhCCEEEEEe
Confidence            47899999 89999999999999998    999999998765544321      01222  334556667799999886

>3tz6_A Aspartate-semialdehyde dehydrogenase; asadh, ASD, ASA, amino-acid biosynthesis, diaminopimelate biosynthesis, lysine biosynthesis; HET: SO4; 1.95A {Mycobacterium tuberculosis} PDB: 3vos_A* 3kub_A 3llg_A

Probab=97.19  E-value=0.0013  Score=57.80  Aligned_cols=68  Identities=19%  Similarity=0.290  Sum_probs=42.3

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhCCC---eEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcCCCcEEEECCC
Q 018503           51 MTVSVTGATGFIGRRLVQRLQADNH---QVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG  125 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~  125 (355)
                      |||.|.||||++|..|++.|.++.|   ++..+....+......-.     .....+.+.+  ...++++|+||.|++
T Consensus         2 ~~VaIvGatG~vG~el~~lL~~h~fp~~el~~~~s~~~aG~~~~~~-----~~~~~~~~~~--~~~~~~~Dvvf~a~~   72 (344)
T 3tz6_A            2 LSIGIVGATGQVGQVMRTLLDERDFPASAVRFFASARSQGRKLAFR-----GQEIEVEDAE--TADPSGLDIALFSAG   72 (344)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTCCEEEEEEEECTTTSSCEEEET-----TEEEEEEETT--TSCCTTCSEEEECSC
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCceEEEEEECcccCCCceeec-----CCceEEEeCC--HHHhccCCEEEECCC
Confidence            6899999999999999999998754   566655433322222100     0112222222  123478999999986

>1t4b_A Aspartate-semialdehyde dehydrogenase; asadh, HOSR, lysine biosynthesis, NADP+ oxidoreductase (phosphorylating), domain movement; 1.60A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1t4d_A 1brm_A 1gl3_A* 1nwc_A 1ta4_A 1tb4_A 1ps8_A 1pr3_A 1oza_A 1pqu_A* 1pqp_A 1nwh_A* 1nx6_A* 1pu2_A* 1q2x_A*

Probab=97.18  E-value=0.0026  Score=56.57  Aligned_cols=69  Identities=14%  Similarity=0.187  Sum_probs=40.2

Q ss_pred             CEEEEEcCCchHHHHHHHH-HHhCCC---eEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcCCCcEEEECCC
Q 018503           51 MTVSVTGATGFIGRRLVQR-LQADNH---QVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG  125 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~-L~~~g~---~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~  125 (355)
                      |||.|.||+|++|+.+++. |.++++   +++.+..+. .........    ...+.+.+.++... ++++|+||.|.+
T Consensus         2 ~kVaIvGAtG~vG~~llr~ll~~~~~~~v~i~~~~~~s-~G~~v~~~~----g~~i~~~~~~~~~~-~~~~DvVf~a~g   74 (367)
T 1t4b_A            2 QNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQ-LGQAAPSFG----GTTGTLQDAFDLEA-LKALDIIVTCQG   74 (367)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSS-TTSBCCGGG----TCCCBCEETTCHHH-HHTCSEEEECSC
T ss_pred             cEEEEECCCCHHHHHHHHHHHhcCCCCeEEEEEEEeCC-CCCCccccC----CCceEEEecCChHH-hcCCCEEEECCC
Confidence            6999999999999999995 544553   566655542 222111000    01122222222222 358999999986

>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A

Probab=97.18  E-value=0.00027  Score=63.01  Aligned_cols=75  Identities=9%  Similarity=0.135  Sum_probs=54.1

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcCCCcEEEECCCCC
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTP  127 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~~  127 (355)
                      .++|+|+|+ |-+|+.+++.+...|.+|++++|++++..........  .......+.+.+.+.+.++|+||++++.+
T Consensus       167 ~~~VlViGa-GgvG~~aa~~a~~~Ga~V~v~dr~~~r~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~DvVI~~~~~~  241 (361)
T 1pjc_A          167 PGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGS--RVELLYSNSAEIETAVAEADLLIGAVLVP  241 (361)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGG--GSEEEECCHHHHHHHHHTCSEEEECCCCT
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhhCc--eeEeeeCCHHHHHHHHcCCCEEEECCCcC
Confidence            379999998 9999999999999999999999998765443221100  11112223456667777999999998763

>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}

Probab=97.17  E-value=0.0022  Score=58.28  Aligned_cols=77  Identities=21%  Similarity=0.295  Sum_probs=52.9

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCe-----------eecCCcchhhhcCCCc
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGV-----------MIAEEPQWRDCIQGST  118 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~-----------d~~~~~~~~~~~~~~d  118 (355)
                      +.+|.|+| .||+|-.++-.|.+.||+|++++.++.+...+........-+.+           .+.-..+..++++++|
T Consensus        21 m~~IaViG-lGYVGLp~A~~~A~~G~~V~g~Did~~kV~~ln~G~~pi~Epgl~ell~~~~~~g~l~~tt~~~~ai~~ad   99 (444)
T 3vtf_A           21 MASLSVLG-LGYVGVVHAVGFALLGHRVVGYDVNPSIVERLRAGRPHIYEPGLEEALGRALSSGRLSFAESAEEAVAATD   99 (444)
T ss_dssp             CCEEEEEC-CSHHHHHHHHHHHHHTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEECSSHHHHHHTSS
T ss_pred             CCEEEEEc-cCHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHCCCCCCCCCCHHHHHHHHHHcCCeeEEcCHHHHHhcCC
Confidence            45899998 89999999999999999999999998876655433210000110           1111234456667889


Q ss_pred             EEEECCCCC
Q 018503          119 AVVNLAGTP  127 (355)
Q Consensus       119 ~vi~~a~~~  127 (355)
                      ++|-|.+-+
T Consensus       100 ~~~I~VpTP  108 (444)
T 3vtf_A          100 ATFIAVGTP  108 (444)
T ss_dssp             EEEECCCCC
T ss_pred             ceEEEecCC
Confidence            999887644

>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*

Probab=97.16  E-value=0.00044  Score=62.72  Aligned_cols=77  Identities=16%  Similarity=0.217  Sum_probs=52.1

Q ss_pred             cCCCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCC---------eeecCCcchhhhcCCC
Q 018503           47 KASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPG---------VMIAEEPQWRDCIQGS  117 (355)
Q Consensus        47 ~~~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~---------~d~~~~~~~~~~~~~~  117 (355)
                      .+..|||.|+| +|++|..++..|.+ |++|+++++++++...+.........+.         ..+.-..++.++++++
T Consensus        33 ~~~~mkIaVIG-lG~mG~~lA~~La~-G~~V~~~D~~~~~v~~l~~g~~~i~e~~l~~ll~~~~~~l~~ttd~~ea~~~a  110 (432)
T 3pid_A           33 GSEFMKITISG-TGYVGLSNGVLIAQ-NHEVVALDIVQAKVDMLNQKISPIVDKEIQEYLAEKPLNFRATTDKHDAYRNA  110 (432)
T ss_dssp             --CCCEEEEEC-CSHHHHHHHHHHHT-TSEEEEECSCHHHHHHHHTTCCSSCCHHHHHHHHHSCCCEEEESCHHHHHTTC
T ss_pred             ccCCCEEEEEC-cCHHHHHHHHHHHc-CCeEEEEecCHHHhhHHhccCCccccccHHHHHhhccCCeEEEcCHHHHHhCC
Confidence            44568999999 79999999999988 9999999999887665443211000000         0122233556778899


Q ss_pred             cEEEECCC
Q 018503          118 TAVVNLAG  125 (355)
Q Consensus       118 d~vi~~a~  125 (355)
                      |+||-+..
T Consensus       111 DvViiaVP  118 (432)
T 3pid_A          111 DYVIIATP  118 (432)
T ss_dssp             SEEEECCC
T ss_pred             CEEEEeCC
Confidence            99998864

>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5

Probab=97.16  E-value=0.00021  Score=61.61  Aligned_cols=74  Identities=20%  Similarity=0.251  Sum_probs=51.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCC----ccCCCeeecCCcchhhhcCCCcEEEECC
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKT----RFFPGVMIAEEPQWRDCIQGSTAVVNLA  124 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~----~~~~~~d~~~~~~~~~~~~~~d~vi~~a  124 (355)
                      ..++++|+|+ |.+|++++..|++.| +|++++|+.++...+......    .....+|+.+   +.+.+.++|+||+++
T Consensus       127 ~~k~vlV~Ga-GgiG~aia~~L~~~G-~V~v~~r~~~~~~~l~~~~~~~~~~~~~~~~d~~~---~~~~~~~~DilVn~a  201 (287)
T 1nvt_A          127 KDKNIVIYGA-GGAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEKLNKKFGEEVKFSG---LDVDLDGVDIIINAT  201 (287)
T ss_dssp             CSCEEEEECC-SHHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHHHHTCCHHHHEEEEC---TTCCCTTCCEEEECS
T ss_pred             CCCEEEEECc-hHHHHHHHHHHHHCC-CEEEEECCHHHHHHHHHHHhhhcccccceeEEEee---HHHhhCCCCEEEECC
Confidence            3578999997 599999999999999 999999987654433211000    0001234443   245567899999999


Q ss_pred             CCC
Q 018503          125 GTP  127 (355)
Q Consensus       125 ~~~  127 (355)
                      +..
T Consensus       202 g~~  204 (287)
T 1nvt_A          202 PIG  204 (287)
T ss_dssp             CTT
T ss_pred             CCC
Confidence            864

>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}

Probab=97.15  E-value=0.00065  Score=57.16  Aligned_cols=66  Identities=18%  Similarity=0.210  Sum_probs=52.0

Q ss_pred             EEEEEcCCchHHHHHHHHHHhCCC-eEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcCCCcEEEECCCC
Q 018503           52 TVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT  126 (355)
Q Consensus        52 ~IlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~  126 (355)
                      +|+|+| +|..|++++..|.+.|. +|++++|+.++...+...     +   .....+++.+.++++|+||++...
T Consensus       110 ~vliiG-aGg~a~ai~~~L~~~G~~~I~v~nR~~~ka~~la~~-----~---~~~~~~~~~~~~~~aDiVInatp~  176 (253)
T 3u62_A          110 PVVVVG-AGGAARAVIYALLQMGVKDIWVVNRTIERAKALDFP-----V---KIFSLDQLDEVVKKAKSLFNTTSV  176 (253)
T ss_dssp             SEEEEC-CSHHHHHHHHHHHHTTCCCEEEEESCHHHHHTCCSS-----C---EEEEGGGHHHHHHTCSEEEECSST
T ss_pred             eEEEEC-cHHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHH-----c---ccCCHHHHHhhhcCCCEEEECCCC
Confidence            799999 49999999999999998 999999998877665543     1   112345566777889999998753

>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}

Probab=97.15  E-value=0.00066  Score=58.87  Aligned_cols=70  Identities=19%  Similarity=0.224  Sum_probs=53.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcCCCcEEEECCCC
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT  126 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~  126 (355)
                      ..++|+|+| .|.+|+.+++.|...|.+|++.+|+.++.......       +++..+.+++.++++++|+||.+...
T Consensus       156 ~g~~v~IiG-~G~iG~~~a~~l~~~G~~V~~~d~~~~~~~~~~~~-------g~~~~~~~~l~~~l~~aDvVi~~~p~  225 (300)
T 2rir_A          156 HGSQVAVLG-LGRTGMTIARTFAALGANVKVGARSSAHLARITEM-------GLVPFHTDELKEHVKDIDICINTIPS  225 (300)
T ss_dssp             TTSEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHT-------TCEEEEGGGHHHHSTTCSEEEECCSS
T ss_pred             CCCEEEEEc-ccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHC-------CCeEEchhhHHHHhhCCCEEEECCCh
Confidence            457999999 59999999999999999999999987654322111       12333345678888999999998753

>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1

Probab=97.15  E-value=0.00064  Score=59.26  Aligned_cols=105  Identities=12%  Similarity=0.097  Sum_probs=64.3

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhCC--CeEEEEecCCchhhccCCCC---CCccCCCeeecCCcchhhhcCCCcEEEECCC
Q 018503           51 MTVSVTGATGFIGRRLVQRLQADN--HQVRVLTRSRSKAELIFPGK---KTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG  125 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~---~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~  125 (355)
                      |||.|+| +|.+|..++..|.+.|  ++|+.++|+.+.........   .......+.+.. .+. +.++++|+||.+++
T Consensus         2 ~kI~VIG-aG~~G~~la~~L~~~g~~~~V~l~d~~~~~~~~~~~~l~~~~~~~~~~~~~~~-~d~-~~~~~aDvViiav~   78 (309)
T 1hyh_A            2 RKIGIIG-LGNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVI-NDW-AALADADVVISTLG   78 (309)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEE-SCG-GGGTTCSEEEECCS
T ss_pred             CEEEEEC-CCHHHHHHHHHHHhCCCCCEEEEEcCCHHHHHHHHHHHHhhhhhcCCCeEEEe-CCH-HHhCCCCEEEEecC
Confidence            6999999 8999999999999998  89999999875543221100   000001123311 233 56789999999987


Q ss_pred             CCCCC-CCChhhHHHHHHHhhhhHHHHHHHHHcC
Q 018503          126 TPIGT-RWSSEIKKEIKESRIRVTSKVVDLINES  158 (355)
Q Consensus       126 ~~~~~-~~~~~~~~~~~~~n~~~~~~l~~a~~~~  158 (355)
                      .+... +.......+....|+.....+++.+.+.
T Consensus        79 ~~~~~~~~~g~~r~~l~~~n~~i~~~i~~~i~~~  112 (309)
T 1hyh_A           79 NIKLQQDNPTGDRFAELKFTSSMVQSVGTNLKES  112 (309)
T ss_dssp             CGGGTC-------CTTHHHHHHHHHHHHHHHHHT
T ss_pred             CcccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence            53210 0001111234556777778888887763

>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*

Probab=97.14  E-value=0.00026  Score=61.56  Aligned_cols=77  Identities=18%  Similarity=0.204  Sum_probs=52.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCC-eEEEEecC---CchhhccCCCCCCcc---CCCeeecCCcchhhhcCCCcEEE
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRS---RSKAELIFPGKKTRF---FPGVMIAEEPQWRDCIQGSTAVV  121 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~---~~~~~~~~~~~~~~~---~~~~d~~~~~~~~~~~~~~d~vi  121 (355)
                      ..++++|+|+ |.+|++++..|.+.|. +|+++.|+   .++...+........   ...+++.+.+.+.+.+.++|+||
T Consensus       153 ~gk~~lVlGa-GG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~~~~~~~~~~~~~~~~l~~~l~~aDiII  231 (315)
T 3tnl_A          153 IGKKMTICGA-GGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSKTDCKAQLFDIEDHEQLRKEIAESVIFT  231 (315)
T ss_dssp             TTSEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHTCSEEE
T ss_pred             cCCEEEEECC-ChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhhcCCceEEeccchHHHHHhhhcCCCEEE
Confidence            3579999996 8999999999999998 89999999   444433221100000   01123333445667778899999


Q ss_pred             ECCCC
Q 018503          122 NLAGT  126 (355)
Q Consensus       122 ~~a~~  126 (355)
                      ++...
T Consensus       232 NaTp~  236 (315)
T 3tnl_A          232 NATGV  236 (315)
T ss_dssp             ECSST
T ss_pred             ECccC
Confidence            99764

>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*

Probab=97.14  E-value=0.00051  Score=59.94  Aligned_cols=69  Identities=12%  Similarity=0.072  Sum_probs=50.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCC--eEEEEecCCchhhccCCCCCCccCCCeeecCCcchhh-hcCCCcEEEECCC
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNH--QVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRD-CIQGSTAVVNLAG  125 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~-~~~~~d~vi~~a~  125 (355)
                      +.|+|.|+| .|.+|..+++.|.+.|+  +|++.+|+++........+    .  .+- -.++..+ +++++|+||.+..
T Consensus        32 ~~~kI~IIG-~G~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a~~~G----~--~~~-~~~~~~~~~~~~aDvVilavp  103 (314)
T 3ggo_A           32 SMQNVLIVG-VGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLG----I--IDE-GTTSIAKVEDFSPDFVMLSSP  103 (314)
T ss_dssp             SCSEEEEES-CSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTT----S--CSE-EESCTTGGGGGCCSEEEECSC
T ss_pred             CCCEEEEEe-eCHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHCC----C--cch-hcCCHHHHhhccCCEEEEeCC
Confidence            347999999 89999999999999999  9999999987654433221    1  110 0123445 6788999998864

>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6

Probab=97.13  E-value=0.00066  Score=59.83  Aligned_cols=74  Identities=24%  Similarity=0.346  Sum_probs=51.5

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhCCCeEEEEec--CCchhhccCCCCCCccC----CCeeecCCcchhhhcCCCcEEEECC
Q 018503           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTR--SRSKAELIFPGKKTRFF----PGVMIAEEPQWRDCIQGSTAVVNLA  124 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r--~~~~~~~~~~~~~~~~~----~~~d~~~~~~~~~~~~~~d~vi~~a  124 (355)
                      |||.|+| .|.+|..++..|.+.||+|++++|  +++....+.........    ..+...+.++..++++++|+||.+.
T Consensus         1 m~I~iiG-~G~mG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~D~vi~~v   79 (335)
T 1txg_A            1 MIVSILG-AGAMGSALSVPLVDNGNEVRIWGTEFDTEILKSISAGREHPRLGVKLNGVEIFWPEQLEKCLENAEVVLLGV   79 (335)
T ss_dssp             CEEEEES-CCHHHHHHHHHHHHHCCEEEEECCGGGHHHHHHHHTTCCBTTTTBCCCSEEEECGGGHHHHHTTCSEEEECS
T ss_pred             CEEEEEC-cCHHHHHHHHHHHhCCCeEEEEEccCCHHHHHHHHHhCcCcccCccccceEEecHHhHHHHHhcCCEEEEcC
Confidence            6899999 599999999999999999999999  76655444332110000    1123333335666778999999886


Q ss_pred             C
Q 018503          125 G  125 (355)
Q Consensus       125 ~  125 (355)
                      .
T Consensus        80 ~   80 (335)
T 1txg_A           80 S   80 (335)
T ss_dssp             C
T ss_pred             C
Confidence            4

>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}

Probab=97.13  E-value=0.0002  Score=61.73  Aligned_cols=65  Identities=14%  Similarity=0.199  Sum_probs=49.7

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcCCCcEEEECCC
Q 018503           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG  125 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~  125 (355)
                      |+|.|+| .|.+|..+++.|.+.||+|++.+|++++...+....       +.  -.++..++++++|+||-+..
T Consensus         2 ~~I~iiG-~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g-------~~--~~~~~~~~~~~advvi~~v~   66 (287)
T 3pdu_A            2 TTYGFLG-LGIMGGPMAANLVRAGFDVTVWNRNPAKCAPLVALG-------AR--QASSPAEVCAACDITIAMLA   66 (287)
T ss_dssp             CCEEEEC-CSTTHHHHHHHHHHHTCCEEEECSSGGGGHHHHHHT-------CE--ECSCHHHHHHHCSEEEECCS
T ss_pred             CeEEEEc-cCHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCC-------Ce--ecCCHHHHHHcCCEEEEEcC
Confidence            6899998 899999999999999999999999987755443211       11  23355666677899988864

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}

Probab=97.13  E-value=0.00038  Score=61.61  Aligned_cols=74  Identities=23%  Similarity=0.203  Sum_probs=51.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCc---chhhhcC--CCcEEEEC
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEP---QWRDCIQ--GSTAVVNL  123 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~---~~~~~~~--~~d~vi~~  123 (355)
                      ...+|||+||+|.+|...++.+...|.+|++++++.++.........   ...+|.. .+   .+.++..  ++|+||++
T Consensus       159 ~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga---~~v~~~~-~~~~~~v~~~~~~~g~Dvvid~  234 (342)
T 4eye_A          159 AGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATEFVKSVGA---DIVLPLE-EGWAKAVREATGGAGVDMVVDP  234 (342)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHTC---SEEEESS-TTHHHHHHHHTTTSCEEEEEES
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCC---cEEecCc-hhHHHHHHHHhCCCCceEEEEC
Confidence            45689999999999999999999999999999998876544332211   1112222 21   2223332  68999999


Q ss_pred             CCC
Q 018503          124 AGT  126 (355)
Q Consensus       124 a~~  126 (355)
                      +|.
T Consensus       235 ~g~  237 (342)
T 4eye_A          235 IGG  237 (342)
T ss_dssp             CC-
T ss_pred             Cch
Confidence            984

>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}

Probab=97.12  E-value=0.00076  Score=58.27  Aligned_cols=69  Identities=17%  Similarity=0.164  Sum_probs=52.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcCCCcEEEECCC
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG  125 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~  125 (355)
                      ..++|+|+| .|.+|+.+++.|...|.+|++.+|+..+.......       +++..+.+++.++++++|+|+.+..
T Consensus       154 ~g~~v~IiG-~G~iG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~-------g~~~~~~~~l~~~l~~aDvVi~~~p  222 (293)
T 3d4o_A          154 HGANVAVLG-LGRVGMSVARKFAALGAKVKVGARESDLLARIAEM-------GMEPFHISKAAQELRDVDVCINTIP  222 (293)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHT-------TSEEEEGGGHHHHTTTCSEEEECCS
T ss_pred             CCCEEEEEe-eCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHC-------CCeecChhhHHHHhcCCCEEEECCC
Confidence            457999999 69999999999999999999999987654322111       1233344567788899999999874

>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1

Probab=97.12  E-value=0.00034  Score=63.39  Aligned_cols=71  Identities=24%  Similarity=0.258  Sum_probs=53.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCC-eEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcCCCcEEEECCCC
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT  126 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~  126 (355)
                      ..++|+|+|+ |.+|+.+++.|...|. +|++++|+.++...+...     + +.+..+.+++.+.+.++|+||.+.+.
T Consensus       166 ~g~~VlIiGa-G~iG~~~a~~l~~~G~~~V~v~~r~~~ra~~la~~-----~-g~~~~~~~~l~~~l~~aDvVi~at~~  237 (404)
T 1gpj_A          166 HDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARD-----L-GGEAVRFDELVDHLARSDVVVSATAA  237 (404)
T ss_dssp             TTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHH-----H-TCEECCGGGHHHHHHTCSEEEECCSS
T ss_pred             cCCEEEEECh-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHH-----c-CCceecHHhHHHHhcCCCEEEEccCC
Confidence            3579999996 9999999999999998 999999987664322211     0 12333445677777899999999864

>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}

Probab=97.11  E-value=0.00061  Score=57.99  Aligned_cols=72  Identities=18%  Similarity=0.122  Sum_probs=50.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCC-eEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcCCCcEEEECCCC
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT  126 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~  126 (355)
                      ..++++|+|+ |.+|++++..|.+.|. +|+++.|+.++...+.....   ...+...+.+++..  .++|+||++...
T Consensus       119 ~~k~~lvlGa-Gg~~~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~---~~~~~~~~~~~l~~--~~~DivInaTp~  191 (272)
T 3pwz_A          119 RNRRVLLLGA-GGAVRGALLPFLQAGPSELVIANRDMAKALALRNELD---HSRLRISRYEALEG--QSFDIVVNATSA  191 (272)
T ss_dssp             TTSEEEEECC-SHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHC---CTTEEEECSGGGTT--CCCSEEEECSSG
T ss_pred             cCCEEEEECc-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhc---cCCeeEeeHHHhcc--cCCCEEEECCCC
Confidence            3579999996 8899999999999995 99999999877655432210   01133334444432  689999999754

>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}

Probab=97.10  E-value=0.00037  Score=61.91  Aligned_cols=75  Identities=15%  Similarity=0.282  Sum_probs=51.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCC-ccCCCeee----cCCcchhhhcCCCcEEEEC
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKT-RFFPGVMI----AEEPQWRDCIQGSTAVVNL  123 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~d~----~~~~~~~~~~~~~d~vi~~  123 (355)
                      ++|||.|+| +|.+|..++..|.+.|++|++.+|+++....+...... ...+.+.+    .-..++.++++++|+||-+
T Consensus        28 ~~mkI~VIG-aG~mG~alA~~La~~G~~V~l~~r~~~~~~~i~~~~~~~~~l~g~~l~~~i~~t~d~~ea~~~aDvVila  106 (356)
T 3k96_A           28 FKHPIAILG-AGSWGTALALVLARKGQKVRLWSYESDHVDEMQAEGVNNRYLPNYPFPETLKAYCDLKASLEGVTDILIV  106 (356)
T ss_dssp             CCSCEEEEC-CSHHHHHHHHHHHTTTCCEEEECSCHHHHHHHHHHSSBTTTBTTCCCCTTEEEESCHHHHHTTCCEEEEC
T ss_pred             cCCeEEEEC-ccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCCCcccCCCCccCCCeEEECCHHHHHhcCCEEEEC
Confidence            357999999 69999999999999999999999987654433221100 00111211    1123566778899999987


Q ss_pred             C
Q 018503          124 A  124 (355)
Q Consensus       124 a  124 (355)
                      .
T Consensus       107 V  107 (356)
T 3k96_A          107 V  107 (356)
T ss_dssp             C
T ss_pred             C
Confidence            5

>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}

Probab=97.06  E-value=0.001  Score=57.74  Aligned_cols=112  Identities=14%  Similarity=0.175  Sum_probs=70.7

Q ss_pred             EEEEEcCCchHHHHHHHHHHhCCC-eEEEEecCCchhhccCCCCCCc---cCCCeeecCCcchhhhcCCCcEEEECCCCC
Q 018503           52 TVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRSKAELIFPGKKTR---FFPGVMIAEEPQWRDCIQGSTAVVNLAGTP  127 (355)
Q Consensus        52 ~IlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~---~~~~~d~~~~~~~~~~~~~~d~vi~~a~~~  127 (355)
                      ||.|+|| |.+|..++..|+..|. +|..++++.++...........   ......+....+. +.++++|+||..++.+
T Consensus         1 KI~IiGa-G~vG~~~a~~l~~~~l~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t~d~-~a~~~aD~Vi~~ag~~   78 (308)
T 2d4a_B            1 MITILGA-GKVGMATAVMLMMRGYDDLLLIARTPGKPQGEALDLAHAAAELGVDIRISGSNSY-EDMRGSDIVLVTAGIG   78 (308)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHHTCSCEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEEESCG-GGGTTCSEEEECCSCC
T ss_pred             CEEEECc-CHHHHHHHHHHHhCCCCEEEEEcCChhhHHHHHHHHHHhhhhcCCCeEEEECCCH-HHhCCCCEEEEeCCCC
Confidence            5899997 9999999999988887 7999999876543211000000   0011222221233 5689999999999875


Q ss_pred             CCCCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEe
Q 018503          128 IGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVS  169 (355)
Q Consensus       128 ~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~S  169 (355)
                      .....   .-.+....|+...+.+++.+.+. .....++.+|
T Consensus        79 ~k~G~---~r~dl~~~n~~i~~~i~~~i~~~-~p~a~iiv~t  116 (308)
T 2d4a_B           79 RKPGM---TREQLLEANANTMADLAEKIKAY-AKDAIVVITT  116 (308)
T ss_dssp             CCSSC---CTHHHHHHHHHHHHHHHHHHHHH-CTTCEEEECC
T ss_pred             CCCCC---cHHHHHHHHHHHHHHHHHHHHHH-CCCeEEEEeC
Confidence            32211   22356778888899999888773 2223455543

>3hsk_A Aspartate-semialdehyde dehydrogenase; candida albicans NADP complex, amino-acid biosynthesis; HET: NAP; 2.20A {Candida albicans}

Probab=97.06  E-value=0.001  Score=59.22  Aligned_cols=34  Identities=29%  Similarity=0.446  Sum_probs=27.4

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHhCC-CeEEEEe
Q 018503           48 ASQMTVSVTGATGFIGRRLVQRLQADN-HQVRVLT   81 (355)
Q Consensus        48 ~~~~~IlVtGatG~iG~~l~~~L~~~g-~~V~~~~   81 (355)
                      |+++||.|.||||++|..+++.|.++. .++..+.
T Consensus        17 M~~~kVaIvGAtG~vG~ell~lL~~hp~~el~~l~   51 (381)
T 3hsk_A           17 MSVKKAGVLGATGSVGQRFILLLSKHPEFEIHALG   51 (381)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHTTCSSEEEEEEE
T ss_pred             CCccEEEEECCCChHHHHHHHHHHcCCCceEEEee
Confidence            345699999999999999999888875 4776553

>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}

Probab=97.02  E-value=0.00024  Score=65.43  Aligned_cols=74  Identities=12%  Similarity=0.236  Sum_probs=55.2

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhh-cCCCcEEEECCC
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDC-IQGSTAVVNLAG  125 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~-~~~~d~vi~~a~  125 (355)
                      .|||+|.| .|.+|++|++.|.+.||+|++++++++....+...... .....|-.+++.+.++ ++++|.+|-+.+
T Consensus         3 ~M~iiI~G-~G~vG~~la~~L~~~~~~v~vId~d~~~~~~~~~~~~~-~~i~Gd~~~~~~L~~Agi~~ad~~ia~t~   77 (461)
T 4g65_A            3 AMKIIILG-AGQVGGTLAENLVGENNDITIVDKDGDRLRELQDKYDL-RVVNGHASHPDVLHEAGAQDADMLVAVTN   77 (461)
T ss_dssp             CEEEEEEC-CSHHHHHHHHHTCSTTEEEEEEESCHHHHHHHHHHSSC-EEEESCTTCHHHHHHHTTTTCSEEEECCS
T ss_pred             cCEEEEEC-CCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhcCc-EEEEEcCCCHHHHHhcCCCcCCEEEEEcC
Confidence            48999999 69999999999999999999999998776544321110 0223466778777765 468999987653

>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1

Probab=97.02  E-value=0.0014  Score=56.45  Aligned_cols=36  Identities=36%  Similarity=0.331  Sum_probs=31.1

Q ss_pred             CCE-EEEE-cCC-----------------chHHHHHHHHHHhCCCeEEEEecCCc
Q 018503           50 QMT-VSVT-GAT-----------------GFIGRRLVQRLQADNHQVRVLTRSRS   85 (355)
Q Consensus        50 ~~~-IlVt-Gat-----------------G~iG~~l~~~L~~~g~~V~~~~r~~~   85 (355)
                      +++ |||| |+|                 |..|.++++.++++|++|+.+.+..+
T Consensus        36 gk~~VLITaGgT~EpID~DpVRfItN~SSGkmG~aiAe~~~~~Ga~V~lv~g~~s   90 (313)
T 1p9o_A           36 GRRVVLVTSGGTKVPLEARPVRFLDNFSSGRRGATSAEAFLAAGYGVLFLYRARS   90 (313)
T ss_dssp             TCCEEEEEESBCEEESSSSCSEEEEECCCCHHHHHHHHHHHHTTCEEEEEEETTS
T ss_pred             CCeEEEEeCCCcccccCCCceeEecCCCCcHHHHHHHHHHHHCCCEEEEEecCCC
Confidence            345 8888 667                 99999999999999999999999653

>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}

Probab=97.00  E-value=0.00057  Score=59.77  Aligned_cols=66  Identities=17%  Similarity=0.280  Sum_probs=48.8

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcCCCcEEEECCC
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG  125 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~  125 (355)
                      .|+|.|+| .|.+|+.++..|.+.|++|++++|+++....+....       +..  .++..++++++|+||.+..
T Consensus        30 ~~~I~iIG-~G~mG~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g-------~~~--~~~~~~~~~~~DvVi~av~   95 (316)
T 2uyy_A           30 DKKIGFLG-LGLMGSGIVSNLLKMGHTVTVWNRTAEKCDLFIQEG-------ARL--GRTPAEVVSTCDITFACVS   95 (316)
T ss_dssp             SSCEEEEC-CSHHHHHHHHHHHHTTCCEEEECSSGGGGHHHHHTT-------CEE--CSCHHHHHHHCSEEEECCS
T ss_pred             CCeEEEEc-ccHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHcC-------CEE--cCCHHHHHhcCCEEEEeCC
Confidence            47899999 699999999999999999999999887654432211       122  2234455667899988864

>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A

Probab=97.00  E-value=0.00065  Score=62.80  Aligned_cols=76  Identities=16%  Similarity=0.199  Sum_probs=51.4

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhC--CCeEEEEecCCchhhccCCCCCCccCCCe----------eecCCcchhhhcCCC
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQAD--NHQVRVLTRSRSKAELIFPGKKTRFFPGV----------MIAEEPQWRDCIQGS  117 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~----------d~~~~~~~~~~~~~~  117 (355)
                      +|+|.|+| +|++|..++..|.+.  ||+|++++|++++...+.........+..          .+.-..+..++++++
T Consensus         5 ~mkI~VIG-~G~mG~~lA~~La~~g~G~~V~~~d~~~~~~~~l~~g~~~i~e~~l~~~~~~~~~~~~~~t~~~~e~~~~a   83 (467)
T 2q3e_A            5 IKKICCIG-AGYVGGPTCSVIAHMCPEIRVTVVDVNESRINAWNSPTLPIYEPGLKEVVESCRGKNLFFSTNIDDAIKEA   83 (467)
T ss_dssp             CCEEEEEC-CSTTHHHHHHHHHHHCTTSEEEEECSCHHHHHHHTSSSCSSCCTTHHHHHHHHBTTTEEEESCHHHHHHHC
T ss_pred             ccEEEEEC-CCHHHHHHHHHHHhcCCCCEEEEEECCHHHHHHHhCCCCCcCCCCHHHHHHHhhcCCEEEECCHHHHHhcC
Confidence            47999999 799999999999998  89999999998776654332110000000          111122344566789


Q ss_pred             cEEEECCCC
Q 018503          118 TAVVNLAGT  126 (355)
Q Consensus       118 d~vi~~a~~  126 (355)
                      |+||-+...
T Consensus        84 DvViiaVpt   92 (467)
T 2q3e_A           84 DLVFISVNT   92 (467)
T ss_dssp             SEEEECCCC
T ss_pred             CEEEEEcCC
Confidence            999998753

>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*

Probab=96.99  E-value=0.0036  Score=54.20  Aligned_cols=38  Identities=24%  Similarity=0.390  Sum_probs=33.7

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhh
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAE   88 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~   88 (355)
                      +++|.|+|+ |.+|..++..|++.|++|++++|+++...
T Consensus        15 ~~~I~VIG~-G~mG~~iA~~la~~G~~V~~~d~~~~~~~   52 (302)
T 1f0y_A           15 VKHVTVIGG-GLMGAGIAQVAAATGHTVVLVDQTEDILA   52 (302)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHH
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHH
Confidence            368999995 99999999999999999999999876544

>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A

Probab=96.99  E-value=0.0018  Score=59.63  Aligned_cols=72  Identities=14%  Similarity=0.270  Sum_probs=49.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeee---cCCcchhhhcCCCcEEEECCC
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMI---AEEPQWRDCIQGSTAVVNLAG  125 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~---~~~~~~~~~~~~~d~vi~~a~  125 (355)
                      .+|+|.|+| .|.+|..++..|.+.||+|++.+|++++...+....    .....+   .+.+++.+.++++|+||.+..
T Consensus         3 ~~~kIgiIG-lG~MG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~g----~~g~~i~~~~s~~e~v~~l~~aDvVil~Vp   77 (484)
T 4gwg_A            3 AQADIALIG-LAVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLANE----AKGTKVVGAQSLKEMVSKLKKPRRIILLVK   77 (484)
T ss_dssp             CCBSEEEEC-CSHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHHTT----TTTSSCEECSSHHHHHHTBCSSCEEEECSC
T ss_pred             CCCEEEEEC-hhHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcc----cCCCceeccCCHHHHHhhccCCCEEEEecC
Confidence            346899999 799999999999999999999999988766543321    011122   223333333446888887754

>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}

Probab=96.99  E-value=0.00074  Score=59.03  Aligned_cols=65  Identities=18%  Similarity=0.136  Sum_probs=47.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCC-CeEEEEecCCc-------hhhccCCCCCCccCCCeeecCCc-chhhhcCCCcE
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADN-HQVRVLTRSRS-------KAELIFPGKKTRFFPGVMIAEEP-QWRDCIQGSTA  119 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~-------~~~~~~~~~~~~~~~~~d~~~~~-~~~~~~~~~d~  119 (355)
                      |+|+|.|+| .|.+|..++..|++.| ++|++.+|+++       ........       ++    .. +..++++++|+
T Consensus        23 M~m~IgvIG-~G~mG~~lA~~L~~~G~~~V~~~dr~~~~~~~~~~~~~~~~~~-------g~----~~~s~~e~~~~aDv   90 (317)
T 4ezb_A           23 MMTTIAFIG-FGEAAQSIAGGLGGRNAARLAAYDLRFNDPAASGALRARAAEL-------GV----EPLDDVAGIACADV   90 (317)
T ss_dssp             SCCEEEEEC-CSHHHHHHHHHHHTTTCSEEEEECGGGGCTTTHHHHHHHHHHT-------TC----EEESSGGGGGGCSE
T ss_pred             cCCeEEEEC-ccHHHHHHHHHHHHcCCCeEEEEeCCCccccchHHHHHHHHHC-------CC----CCCCHHHHHhcCCE
Confidence            457999999 8999999999999999 99999999873       11111111       11    23 44566778899


Q ss_pred             EEECCC
Q 018503          120 VVNLAG  125 (355)
Q Consensus       120 vi~~a~  125 (355)
                      ||-+..
T Consensus        91 Vi~avp   96 (317)
T 4ezb_A           91 VLSLVV   96 (317)
T ss_dssp             EEECCC
T ss_pred             EEEecC
Confidence            888764

>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*

Probab=96.98  E-value=0.00064  Score=58.86  Aligned_cols=66  Identities=17%  Similarity=0.297  Sum_probs=52.2

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcCCCcEEEECCC
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG  125 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~  125 (355)
                      |+||.++| .|..|..+++.|++.||+|++.+|++++...+....       .  .-.++..++++++|+||-|..
T Consensus         3 M~kIgfIG-lG~MG~~mA~~L~~~G~~v~v~dr~~~~~~~l~~~G-------a--~~a~s~~e~~~~~dvv~~~l~   68 (300)
T 3obb_A            3 MKQIAFIG-LGHMGAPMATNLLKAGYLLNVFDLVQSAVDGLVAAG-------A--SAARSARDAVQGADVVISMLP   68 (300)
T ss_dssp             CCEEEEEC-CSTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTT-------C--EECSSHHHHHTTCSEEEECCS
T ss_pred             cCEEEEee-ehHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHcC-------C--EEcCCHHHHHhcCCceeecCC
Confidence            36899999 899999999999999999999999988776654332       1  224456677788888888754

>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}

Probab=96.97  E-value=0.0012  Score=56.36  Aligned_cols=67  Identities=19%  Similarity=0.301  Sum_probs=50.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCC-eEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcCCCcEEEECCCC
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT  126 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~  126 (355)
                      ..++++|+|+ |..|++++..|.+.|. +|+++.|+.++...+...     +   ...+.+++.+ + ++|+||++...
T Consensus       121 ~~k~vlvlGa-GGaaraia~~L~~~G~~~v~v~nRt~~ka~~La~~-----~---~~~~~~~l~~-l-~~DivInaTp~  188 (282)
T 3fbt_A          121 KNNICVVLGS-GGAARAVLQYLKDNFAKDIYVVTRNPEKTSEIYGE-----F---KVISYDELSN-L-KGDVIINCTPK  188 (282)
T ss_dssp             TTSEEEEECS-STTHHHHHHHHHHTTCSEEEEEESCHHHHHHHCTT-----S---EEEEHHHHTT-C-CCSEEEECSST
T ss_pred             cCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHh-----c---CcccHHHHHh-c-cCCEEEECCcc
Confidence            3579999995 8899999999999998 999999998887666543     2   1222334444 4 89999999754

>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A

Probab=96.96  E-value=0.0019  Score=55.85  Aligned_cols=99  Identities=16%  Similarity=0.147  Sum_probs=64.4

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhCCC--eEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcCCCcEEEECCCCCC
Q 018503           51 MTVSVTGATGFIGRRLVQRLQADNH--QVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTPI  128 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~~~  128 (355)
                      +||.|+|| |.+|..++..|+..|+  +|..++++.+ ...............+...  .++ +.++++|+||.+++...
T Consensus        15 ~kV~ViGa-G~vG~~~a~~l~~~g~~~ev~L~Di~~~-~~g~a~dl~~~~~~~i~~t--~d~-~~l~~aD~Vi~aag~~~   89 (303)
T 2i6t_A           15 NKITVVGG-GELGIACTLAISAKGIADRLVLLDLSEG-TKGATMDLEIFNLPNVEIS--KDL-SASAHSKVVIFTVNSLG   89 (303)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECCC------CHHHHHHHTCTTEEEE--SCG-GGGTTCSEEEECCCC--
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEcCCcc-hHHHHHHHhhhcCCCeEEe--CCH-HHHCCCCEEEEcCCCCC
Confidence            69999995 9999999999999998  9999999874 1100000000001123332  234 66889999999998741


Q ss_pred             CCCCChhhHHHHHHHhhhhHHHHHHHHHcC
Q 018503          129 GTRWSSEIKKEIKESRIRVTSKVVDLINES  158 (355)
Q Consensus       129 ~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~  158 (355)
                          ....-.+....|+...+.+++.+.+.
T Consensus        90 ----pG~tR~dl~~~n~~i~~~i~~~i~~~  115 (303)
T 2i6t_A           90 ----SSQSYLDVVQSNVDMFRALVPALGHY  115 (303)
T ss_dssp             ------CCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ----CCCCHHHHHHHHHHHHHHHHHHHHHh
Confidence                12233466778888888998888773

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A

Probab=96.95  E-value=0.00081  Score=59.44  Aligned_cols=74  Identities=23%  Similarity=0.083  Sum_probs=51.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCc---chhhhcCCCcEEEECCC
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEP---QWRDCIQGSTAVVNLAG  125 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~---~~~~~~~~~d~vi~~a~  125 (355)
                      ...+|||+|+ |.+|..+++.+...|.+|++++|++++.........   ...+|..+.+   .+.++..++|+||+++|
T Consensus       164 ~g~~VlV~Ga-G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lGa---~~~~d~~~~~~~~~~~~~~~~~d~vid~~g  239 (339)
T 1rjw_A          164 PGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLELAKELGA---DLVVNPLKEDAAKFMKEKVGGVHAAVVTAV  239 (339)
T ss_dssp             TTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTC---SEEECTTTSCHHHHHHHHHSSEEEEEESSC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHCCC---CEEecCCCccHHHHHHHHhCCCCEEEECCC
Confidence            3568999999 679999999999999999999998776554332211   1113443332   22232357999999987


Q ss_pred             C
Q 018503          126 T  126 (355)
Q Consensus       126 ~  126 (355)
                      .
T Consensus       240 ~  240 (339)
T 1rjw_A          240 S  240 (339)
T ss_dssp             C
T ss_pred             C
Confidence            4

>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}

Probab=96.95  E-value=0.00083  Score=58.03  Aligned_cols=65  Identities=17%  Similarity=0.225  Sum_probs=46.8

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcCCCcEEEECCC
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG  125 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~  125 (355)
                      +|+|.|+| +|.+|+.++..|.+.|++|++++ +++....+....       +  .-.++..++++++|+||.+..
T Consensus         3 ~m~i~iiG-~G~~G~~~a~~l~~~g~~V~~~~-~~~~~~~~~~~g-------~--~~~~~~~~~~~~~D~vi~~vp   67 (295)
T 1yb4_A            3 AMKLGFIG-LGIMGSPMAINLARAGHQLHVTT-IGPVADELLSLG-------A--VNVETARQVTEFADIIFIMVP   67 (295)
T ss_dssp             -CEEEECC-CSTTHHHHHHHHHHTTCEEEECC-SSCCCHHHHTTT-------C--BCCSSHHHHHHTCSEEEECCS
T ss_pred             CCEEEEEc-cCHHHHHHHHHHHhCCCEEEEEc-CHHHHHHHHHcC-------C--cccCCHHHHHhcCCEEEEECC
Confidence            37999999 79999999999999999999888 665544332211       1  112345566678899988864

>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*

Probab=96.95  E-value=0.0012  Score=55.78  Aligned_cols=65  Identities=22%  Similarity=0.218  Sum_probs=49.0

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcCCCcEEEECCCC
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT  126 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~  126 (355)
                      .++++|+|+ |..|++++..|.+.|.+|+++.|+.++...+. .     .. +.....+++    .++|+||++...
T Consensus       118 ~k~vlvlGa-GGaaraia~~L~~~G~~v~V~nRt~~ka~~la-~-----~~-~~~~~~~~l----~~~DiVInaTp~  182 (269)
T 3phh_A          118 YQNALILGA-GGSAKALACELKKQGLQVSVLNRSSRGLDFFQ-R-----LG-CDCFMEPPK----SAFDLIINATSA  182 (269)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCTTHHHHH-H-----HT-CEEESSCCS----SCCSEEEECCTT
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-H-----CC-CeEecHHHh----ccCCEEEEcccC
Confidence            579999995 99999999999999999999999988766554 2     11 222233332    279999999764

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}

Probab=96.94  E-value=0.00065  Score=60.32  Aligned_cols=72  Identities=7%  Similarity=0.038  Sum_probs=50.8

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcc---hhhhc--CCCcEEEECCC
Q 018503           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQ---WRDCI--QGSTAVVNLAG  125 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~---~~~~~--~~~d~vi~~a~  125 (355)
                      .+|+|+||+|.+|...++.+...|.+|+++++++++.......+.   ...+|..+.+.   +.++.  .++|+||+++|
T Consensus       166 ~~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~~Ga---~~~~~~~~~~~~~~v~~~~~~~g~D~vid~~g  242 (349)
T 3pi7_A          166 KAFVMTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQIALLKDIGA---AHVLNEKAPDFEATLREVMKAEQPRIFLDAVT  242 (349)
T ss_dssp             SEEEESSTTSHHHHHHHHHHHHHTCEEEEEESCGGGHHHHHHHTC---SEEEETTSTTHHHHHHHHHHHHCCCEEEESSC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCC---CEEEECCcHHHHHHHHHHhcCCCCcEEEECCC
Confidence            589999999999999999999999999999998876554432211   11234333332   22222  27999999987

>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*

Probab=96.94  E-value=0.0043  Score=53.25  Aligned_cols=72  Identities=15%  Similarity=0.139  Sum_probs=47.3

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcCCCcEEEECCC
Q 018503           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG  125 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~  125 (355)
                      |||.|+|+ |.+|..++..|.+.|++|++++|+++....+.............+.. +. .+.++++|+||-+..
T Consensus         1 m~i~iiG~-G~~G~~~a~~l~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~~~~~-~~-~~~~~~~d~vi~~v~   72 (291)
T 1ks9_A            1 MKITVLGC-GALGQLWLTALCKQGHEVQGWLRVPQPYCSVNLVETDGSIFNESLTA-ND-PDFLATSDLLLVTLK   72 (291)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCSEEEEEEECTTSCEEEEEEEE-SC-HHHHHTCSEEEECSC
T ss_pred             CeEEEECc-CHHHHHHHHHHHhCCCCEEEEEcCccceeeEEEEcCCCceeeeeeee-cC-ccccCCCCEEEEEec
Confidence            68999995 99999999999999999999999886544332111000000011111 12 245568999998864

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A

Probab=96.94  E-value=0.00086  Score=59.81  Aligned_cols=74  Identities=20%  Similarity=0.079  Sum_probs=52.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCC-cchhhhcCCCcEEEECCCC
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEE-PQWRDCIQGSTAVVNLAGT  126 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~-~~~~~~~~~~d~vi~~a~~  126 (355)
                      ...+|||+|+ |-+|...++.+...|.+|+++++++++.......+.   ...+|..+. +...++..++|+||.+++.
T Consensus       179 ~g~~VlV~Ga-G~vG~~~~qlak~~Ga~Vi~~~~~~~~~~~~~~lGa---~~v~~~~~~~~~~~~~~~~~D~vid~~g~  253 (360)
T 1piw_A          179 PGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDAMKMGA---DHYIATLEEGDWGEKYFDTFDLIVVCASS  253 (360)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHHTC---SEEEEGGGTSCHHHHSCSCEEEEEECCSC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHcCC---CEEEcCcCchHHHHHhhcCCCEEEECCCC
Confidence            3468999999 999999999988889999999998876554332211   112344444 3333333589999999874

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}

Probab=96.93  E-value=0.0017  Score=58.20  Aligned_cols=74  Identities=15%  Similarity=0.100  Sum_probs=49.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhc--CCCcEEEECCCC
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCI--QGSTAVVNLAGT  126 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~--~~~d~vi~~a~~  126 (355)
                      ...+|||+||+|-+|...++.+...|.+|+++++ +++.......+.   ...+|..+.+..+++.  .++|+||+++|.
T Consensus       183 ~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~~-~~~~~~~~~lGa---~~v~~~~~~~~~~~~~~~~g~D~vid~~g~  258 (375)
T 2vn8_A          183 TGKRVLILGASGGVGTFAIQVMKAWDAHVTAVCS-QDASELVRKLGA---DDVIDYKSGSVEEQLKSLKPFDFILDNVGG  258 (375)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC-GGGHHHHHHTTC---SEEEETTSSCHHHHHHTSCCBSEEEESSCT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEeC-hHHHHHHHHcCC---CEEEECCchHHHHHHhhcCCCCEEEECCCC
Confidence            3468999999999999999999999999999884 444332222111   1113443433333322  479999999874

>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*

Probab=96.92  E-value=0.00042  Score=65.02  Aligned_cols=70  Identities=17%  Similarity=0.173  Sum_probs=46.0

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhh-hcCCCcEEEECCCC
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRD-CIQGSTAVVNLAGT  126 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~-~~~~~d~vi~~a~~  126 (355)
                      .++++|+|| |.+|++++..|++.|++|+++.|+.++...+.....   ....++   +++.+ ....+|++||+++.
T Consensus       364 ~k~vlV~Ga-GGig~aia~~L~~~G~~V~i~~R~~~~a~~la~~~~---~~~~~~---~dl~~~~~~~~DilVN~agv  434 (523)
T 2o7s_A          364 SKTVVVIGA-GGAGKALAYGAKEKGAKVVIANRTYERALELAEAIG---GKALSL---TDLDNYHPEDGMVLANTTSM  434 (523)
T ss_dssp             --CEEEECC-SHHHHHHHHHHHHHCC-CEEEESSHHHHHHHHHHTT---C-CEET---TTTTTC--CCSEEEEECSST
T ss_pred             CCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcC---CceeeH---HHhhhccccCceEEEECCCC
Confidence            468999998 799999999999999999999998766554322110   011122   12322 12358999999986

>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A

Probab=96.91  E-value=0.00076  Score=61.41  Aligned_cols=69  Identities=16%  Similarity=0.136  Sum_probs=51.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcCCCcEEEE
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVN  122 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~  122 (355)
                      .+++|+|+| .|.+|+.+++.+.+.|++|++++.++..........    ....++.|.+.+.++.+++|+|+.
T Consensus        34 ~~~~IlIlG-~G~lg~~~~~aa~~lG~~v~v~d~~~~~p~~~~ad~----~~~~~~~d~~~l~~~a~~~D~V~~  102 (419)
T 4e4t_A           34 PGAWLGMVG-GGQLGRMFCFAAQSMGYRVAVLDPDPASPAGAVADR----HLRAAYDDEAALAELAGLCEAVST  102 (419)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCTTCHHHHHSSE----EECCCTTCHHHHHHHHHHCSEEEE
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEECCCCcCchhhhCCE----EEECCcCCHHHHHHHHhcCCEEEE
Confidence            456999999 699999999999999999999987654332221111    223566788888888888999884

>3k5i_A Phosphoribosyl-aminoimidazole carboxylase; purine biosynthesis, ATP-grAsp, lyase; HET: NHE ADP AIR; 2.00A {Aspergillus clavatus} PDB: 3k5h_A*

Probab=96.89  E-value=0.0016  Score=59.04  Aligned_cols=71  Identities=23%  Similarity=0.187  Sum_probs=51.1

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcCCCcEEEE
Q 018503           48 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVN  122 (355)
Q Consensus        48 ~~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~  122 (355)
                      |++++|+|+| .|.+|+.+++.+.+.|++|++++ .+...........  .....++.|.+.+.++.+.+|+|+.
T Consensus        22 m~~~~I~ilG-gG~lg~~l~~aa~~lG~~v~~~d-~~~~p~~~~ad~~--~~~~~~~~d~~~l~~~a~~~d~i~~   92 (403)
T 3k5i_A           22 WNSRKVGVLG-GGQLGRMLVESANRLNIQVNVLD-ADNSPAKQISAHD--GHVTGSFKEREAVRQLAKTCDVVTA   92 (403)
T ss_dssp             CSCCEEEEEC-CSHHHHHHHHHHHHHTCEEEEEE-STTCTTGGGCCSS--CCEESCTTCHHHHHHHHTTCSEEEE
T ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEE-CCCCcHHHhcccc--ceeecCCCCHHHHHHHHHhCCEEEE
Confidence            3457999999 58999999999999999999999 5433222111100  0223466678888888889998875

>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*

Probab=96.88  E-value=0.00049  Score=59.69  Aligned_cols=77  Identities=12%  Similarity=0.121  Sum_probs=49.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCC-eEEEEecC---CchhhccCCCCCCccCCCeeecCCcc---hhhhcCCCcEEE
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRS---RSKAELIFPGKKTRFFPGVMIAEEPQ---WRDCIQGSTAVV  121 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~---~~~~~~~~~~~~~~~~~~~d~~~~~~---~~~~~~~~d~vi  121 (355)
                      ..++++|+|+ |.+|++++..|.+.|. +|+++.|+   .++...+...........+...+.++   +.+.+.++|+||
T Consensus       147 ~gk~~lVlGA-GGaaraia~~L~~~G~~~v~v~nRt~~~~~~a~~la~~~~~~~~~~v~~~~~~~l~~~~~~l~~~DiII  225 (312)
T 3t4e_A          147 RGKTMVLLGA-GGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAFAKRVNENTDCVVTVTDLADQHAFTEALASADILT  225 (312)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTHHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHHCSEEE
T ss_pred             CCCEEEEECc-CHHHHHHHHHHHHcCCCEEEEEECCCchHHHHHHHHHHhhhccCcceEEechHhhhhhHhhccCceEEE
Confidence            3579999996 9999999999999997 89999999   44443322110000001122223233   355667899999


Q ss_pred             ECCCC
Q 018503          122 NLAGT  126 (355)
Q Consensus       122 ~~a~~  126 (355)
                      ++...
T Consensus       226 NaTp~  230 (312)
T 3t4e_A          226 NGTKV  230 (312)
T ss_dssp             ECSST
T ss_pred             ECCcC
Confidence            99764

>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*

Probab=96.88  E-value=0.0007  Score=57.92  Aligned_cols=72  Identities=19%  Similarity=0.199  Sum_probs=49.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCC-eEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcCCCcEEEECCCC
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT  126 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~  126 (355)
                      ..++++|+|+ |.+|+.++..|.+.|. +|+++.|+.++...+......  ...+...+.+   ++..++|+||++...
T Consensus       125 ~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~--~~~~~~~~~~---~l~~~aDiIInaTp~  197 (281)
T 3o8q_A          125 KGATILLIGA-GGAARGVLKPLLDQQPASITVTNRTFAKAEQLAELVAA--YGEVKAQAFE---QLKQSYDVIINSTSA  197 (281)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHTTCCSEEEEEESSHHHHHHHHHHHGG--GSCEEEEEGG---GCCSCEEEEEECSCC
T ss_pred             cCCEEEEECc-hHHHHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhc--cCCeeEeeHH---HhcCCCCEEEEcCcC
Confidence            3579999996 8899999999999996 999999998775543321100  0012222222   223689999999764

>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A*

Probab=96.87  E-value=0.005  Score=46.87  Aligned_cols=61  Identities=15%  Similarity=0.047  Sum_probs=42.2

Q ss_pred             CCEEEEEcCC---chHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcCCCcEEEECC
Q 018503           50 QMTVSVTGAT---GFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLA  124 (355)
Q Consensus        50 ~~~IlVtGat---G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a  124 (355)
                      +.+|+|+|++   |.+|..+++.|.+.|++|+.++-+.   ..         ..++..  ..++.++...+|.++-+.
T Consensus        22 p~~iaVVGas~~~g~~G~~~~~~l~~~G~~v~~Vnp~~---~~---------i~G~~~--y~sl~~l~~~vDlvvi~v   85 (144)
T 2d59_A           22 YKKIALVGASPKPERDANIVMKYLLEHGYDVYPVNPKY---EE---------VLGRKC--YPSVLDIPDKIEVVDLFV   85 (144)
T ss_dssp             CCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTC---SE---------ETTEEC--BSSGGGCSSCCSEEEECS
T ss_pred             CCEEEEEccCCCCCchHHHHHHHHHHCCCEEEEECCCC---Ce---------ECCeec--cCCHHHcCCCCCEEEEEe
Confidence            4689999998   8999999999999999976654332   11         111221  234455556799988775

>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*

Probab=96.86  E-value=0.0041  Score=52.18  Aligned_cols=34  Identities=21%  Similarity=0.236  Sum_probs=30.6

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCC-eEEEEecCC
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSR   84 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~   84 (355)
                      .++|+|+| .|.+|+++++.|...|. +|++++++.
T Consensus        31 ~~~VlVvG-~Gg~G~~va~~La~~Gv~~i~lvD~d~   65 (249)
T 1jw9_B           31 DSRVLIVG-LGGLGCAASQYLASAGVGNLTLLDFDT   65 (249)
T ss_dssp             HCEEEEEC-CSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred             CCeEEEEe-eCHHHHHHHHHHHHcCCCeEEEEcCCC
Confidence            36899999 69999999999999996 899999886

>2yv3_A Aspartate-semialdehyde dehydrogenase; aspartate pathway, structural genomics; 2.70A {Thermus thermophilus}

Probab=96.86  E-value=0.0016  Score=57.14  Aligned_cols=28  Identities=43%  Similarity=0.710  Sum_probs=24.3

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhCCCeEE
Q 018503           51 MTVSVTGATGFIGRRLVQRLQADNHQVR   78 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~g~~V~   78 (355)
                      |||.|.||+|++|+.+++.|.+++|++.
T Consensus         1 mkVaI~GAtG~iG~~llr~L~~~~~~~~   28 (331)
T 2yv3_A            1 MRVAVVGATGAVGREILKVLEARNFPLS   28 (331)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHHTTCCCS
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCcE
Confidence            5899999999999999999997776543

>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}

Probab=96.86  E-value=0.0025  Score=52.04  Aligned_cols=49  Identities=14%  Similarity=0.262  Sum_probs=40.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcCCCcEEEECCC
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG  125 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~  125 (355)
                      .+|+|.|+| +|.+|+.++..|.+.|++|++++|+++                           .++++|+||-+..
T Consensus        18 ~~~~I~iiG-~G~mG~~la~~l~~~g~~V~~~~~~~~---------------------------~~~~aD~vi~av~   66 (209)
T 2raf_A           18 QGMEITIFG-KGNMGQAIGHNFEIAGHEVTYYGSKDQ---------------------------ATTLGEIVIMAVP   66 (209)
T ss_dssp             --CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECTTCC---------------------------CSSCCSEEEECSC
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEcCCHH---------------------------HhccCCEEEEcCC
Confidence            357999999 899999999999999999999988653                           4567899998863

>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}

Probab=96.85  E-value=0.00049  Score=60.05  Aligned_cols=66  Identities=12%  Similarity=0.104  Sum_probs=47.7

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCC-eEEEEecCC--chhhccCCCCCCccCCCeeecCCcchhhhcCCCcEEEECCC
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSR--SKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG  125 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~--~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~  125 (355)
                      +|+|.|+| .|.+|..++..|.+.|| +|++.+|++  +........       ++..  .++..++++++|+||-+..
T Consensus        24 ~~~I~iIG-~G~mG~~~A~~L~~~G~~~V~~~dr~~~~~~~~~~~~~-------g~~~--~~~~~e~~~~aDvVi~~vp   92 (312)
T 3qsg_A           24 AMKLGFIG-FGEAASAIASGLRQAGAIDMAAYDAASAESWRPRAEEL-------GVSC--KASVAEVAGECDVIFSLVT   92 (312)
T ss_dssp             -CEEEEEC-CSHHHHHHHHHHHHHSCCEEEEECSSCHHHHHHHHHHT-------TCEE--CSCHHHHHHHCSEEEECSC
T ss_pred             CCEEEEEC-ccHHHHHHHHHHHHCCCCeEEEEcCCCCHHHHHHHHHC-------CCEE--eCCHHHHHhcCCEEEEecC
Confidence            47999999 79999999999999999 999999973  333322211       1122  3355566778999998864

>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*

Probab=96.84  E-value=0.0017  Score=57.86  Aligned_cols=74  Identities=18%  Similarity=0.158  Sum_probs=53.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccC-CCCCCccCCCeeecCCcchhhhcCCCcEEEECCCC
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIF-PGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT  126 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~  126 (355)
                      ...+|||+|+ |-+|...++.+...|.+|+++++++++..... ..+.   ..-+|..+.+.+.++..++|+||.++|.
T Consensus       180 ~g~~VlV~Ga-G~vG~~a~qlak~~Ga~Vi~~~~~~~~~~~~~~~lGa---~~vi~~~~~~~~~~~~~g~D~vid~~g~  254 (357)
T 2cf5_A          180 PGLRGGILGL-GGVGHMGVKIAKAMGHHVTVISSSNKKREEALQDLGA---DDYVIGSDQAKMSELADSLDYVIDTVPV  254 (357)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSTTHHHHHHTTSCC---SCEEETTCHHHHHHSTTTEEEEEECCCS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHcCC---ceeeccccHHHHHHhcCCCCEEEECCCC
Confidence            3468999995 99999999988888999999999887654433 2221   1123444444555555689999999874

>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6

Probab=96.83  E-value=0.0013  Score=56.30  Aligned_cols=66  Identities=20%  Similarity=0.240  Sum_probs=47.9

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcCCCcEEEECCC
Q 018503           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG  125 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~  125 (355)
                      |+|.|+| +|.+|..+++.|.+.|++|++++|+++.........    ... ..  .+++.++ +++|+||.+..
T Consensus         1 m~i~iiG-~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g----~~~-~~--~~~~~~~-~~~D~vi~av~   66 (279)
T 2f1k_A            1 MKIGVVG-LGLIGASLAGDLRRRGHYLIGVSRQQSTCEKAVERQ----LVD-EA--GQDLSLL-QTAKIIFLCTP   66 (279)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTT----SCS-EE--ESCGGGG-TTCSEEEECSC
T ss_pred             CEEEEEc-CcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhCC----CCc-cc--cCCHHHh-CCCCEEEEECC
Confidence            6899999 799999999999999999999999877654432211    110 11  1234455 78999998863

>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A

Probab=96.83  E-value=0.0014  Score=58.72  Aligned_cols=69  Identities=19%  Similarity=0.169  Sum_probs=51.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcCCCcEEEE
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVN  122 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~  122 (355)
                      ++++|+|+| .|.+|+.+++.+.+.|++|++++..+..........    ....++.|.+.+.++.+.+|+|..
T Consensus        11 ~~~~IlIlG-~G~lg~~la~aa~~lG~~viv~d~~~~~p~~~~ad~----~~~~~~~d~~~l~~~~~~~dvi~~   79 (377)
T 3orq_A           11 FGATIGIIG-GGQLGKMMAQSAQKMGYKVVVLDPSEDCPCRYVAHE----FIQAKYDDEKALNQLGQKCDVITY   79 (377)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCTTCTTGGGSSE----EEECCTTCHHHHHHHHHHCSEEEE
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEECCCCChhhhhCCE----EEECCCCCHHHHHHHHHhCCccee
Confidence            457999999 699999999999999999999988765332211110    223466677888888888998865

>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*

Probab=96.83  E-value=0.00053  Score=61.33  Aligned_cols=72  Identities=19%  Similarity=0.287  Sum_probs=48.0

Q ss_pred             EEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCC-ccCCCe----eecCCcchhhhcCCCcEEEECC
Q 018503           52 TVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKT-RFFPGV----MIAEEPQWRDCIQGSTAVVNLA  124 (355)
Q Consensus        52 ~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~----d~~~~~~~~~~~~~~d~vi~~a  124 (355)
                      +|.|+| .|.+|..++..|.+.||+|++++|+++....+...... ......    .+.-.++..++++++|+||-+.
T Consensus        17 kI~iIG-~G~mG~~la~~L~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aDvVilav   93 (366)
T 1evy_A           17 KAVVFG-SGAFGTALAMVLSKKCREVCVWHMNEEEVRLVNEKRENVLFLKGVQLASNITFTSDVEKAYNGAEIILFVI   93 (366)
T ss_dssp             EEEEEC-CSHHHHHHHHHHTTTEEEEEEECSCHHHHHHHHHHTBCTTTSTTCBCCTTEEEESCHHHHHTTCSSEEECC
T ss_pred             eEEEEC-CCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHcCcccccccccccccceeeeCCHHHHHcCCCEEEECC
Confidence            899999 59999999999999999999999987654433211000 000011    1111234556677899999885

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}

Probab=96.81  E-value=0.00076  Score=59.09  Aligned_cols=73  Identities=16%  Similarity=0.120  Sum_probs=51.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcCCCcEEEECCC
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG  125 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~  125 (355)
                      ...+|||+||+|.+|...++.+...|.+|+++++..+ .......+.   ...+|..+.+.+.+.+.++|+||.+.|
T Consensus       152 ~g~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~~~~~-~~~~~~lGa---~~~i~~~~~~~~~~~~~g~D~v~d~~g  224 (321)
T 3tqh_A          152 QGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTASKRN-HAFLKALGA---EQCINYHEEDFLLAISTPVDAVIDLVG  224 (321)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEECHHH-HHHHHHHTC---SEEEETTTSCHHHHCCSCEEEEEESSC
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEeccch-HHHHHHcCC---CEEEeCCCcchhhhhccCCCEEEECCC
Confidence            4468999999999999999999999999999885433 222221111   112344444436677789999999987

>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*

Probab=96.81  E-value=0.00092  Score=57.80  Aligned_cols=64  Identities=11%  Similarity=0.159  Sum_probs=47.5

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcCCCcEEEECC
Q 018503           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLA  124 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a  124 (355)
                      |+|.|+| .|.+|+.++..|.+.|++|++.+|+++....+....       +..  .++..++++++|+||.+.
T Consensus         1 m~i~iiG-~G~mG~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g-------~~~--~~~~~~~~~~~Dvvi~~v   64 (296)
T 2gf2_A            1 MPVGFIG-LGNMGNPMAKNLMKHGYPLIIYDVFPDACKEFQDAG-------EQV--VSSPADVAEKADRIITML   64 (296)
T ss_dssp             CCEEEEC-CSTTHHHHHHHHHHTTCCEEEECSSTHHHHHHHTTT-------CEE--CSSHHHHHHHCSEEEECC
T ss_pred             CeEEEEe-ccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcC-------Cee--cCCHHHHHhcCCEEEEeC
Confidence            5799999 799999999999999999999999887655443321       222  123445556788888775

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	355
d1r6da_	322	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	7e-20
d2q46a1	252	c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (	5e-19
d1xgka_	350	c.2.1.2 (A:) Negative transcriptional regulator Nm	2e-18
d2b69a1	312	c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1	2e-18
d1kewa_	361	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	2e-16
d1hdoa_	205	c.2.1.2 (A:) Biliverdin IX beta reductase {Human (	1e-15
d1qyda_	312	c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {	7e-15
d1qyca_	307	c.2.1.2 (A:) Phenylcoumaran benzylic ether reducta	2e-13
d1db3a_	357	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escheric	1e-12
d1rpna_	321	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomo	3e-12
d1sb8a_	341	c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase W	4e-12
d1y1pa1	342	c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolo	6e-12
d1t2aa_	347	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (H	4e-11
d1udca_	338	c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras	2e-10
d2c5aa1	363	c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {T	2e-09
d1e6ua_	315	c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimeras	4e-09
d1oc2a_	346	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	4e-09
d2a35a1	212	c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pse	1e-08
d2bkaa1	232	c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {H	1e-07
d1ek6a_	346	c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras	9e-07
d2blla1	342	c.2.1.2 (A:316-657) Polymyxin resistance protein A	1e-06
d1vl0a_	281	c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD	2e-06
d1n2sa_	298	c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reduct	8e-06
d1orra_	338	c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella	8e-06
d1rkxa_	356	c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia	9e-06
d1n7ha_	339	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cr	1e-05
d1i24a_	393	c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1	2e-05
d1z45a2	347	c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-ep	3e-05
d1gy8a_	383	c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras	5e-05
d2hjsa1	144	c.2.1.3 (A:3-129,A:320-336) Usg-1 protein homolog	4e-04
d1e5qa1	182	c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase	4e-04
d1mb4a1	147	c.2.1.3 (A:1-132,A:355-369) Aspartate beta-semiald	5e-04
d2ag5a1	245	c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR fami	7e-04
d1eq2a_	307	c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimer	8e-04
d1jaya_	212	c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase	9e-04
d1yo6a1	250	c.2.1.2 (A:1-250) Putative carbonyl reductase snif	0.003

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]} Length = 322

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

 Score = 86.8 bits (214), Expect = 7e-20
 Identities = 54/270 (20%), Positives = 96/270 (35%), Gaps = 24/270 (8%)

Query: 51  MTVSVTGATGFIGRRLVQRLQADNHQVRV---------LTRSRSKAELIFPGKKTRF-FP 100
           M + VTG  GFIG   V++L A  +             LT + ++A L       R  F 
Sbjct: 1   MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFV 60

Query: 101 GVMIAEEPQWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPE 160
              I +       ++G  A+V+ A      R  +      + +     + +   ++    
Sbjct: 61  HGDIRDAGLLARELRGVDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGVG 120

Query: 161 GVRPSVLVSATALGYYGTSETEVFDESSPSG--NDY-LAEVCREWEGTALKVNKDVRLAL 217
                 +V  +    YG+ ++  + ESSP    + Y  ++   +    A      + + +
Sbjct: 121 -----RVVHVSTNQVYGSIDSGSWTESSPLEPNSPYAASKAGSDLVARAYHRTYGLDVRI 175

Query: 218 IRIGIVLGKDGGALAKMIPLFM--MFAGGPL---GSGQQWFSWIHLDDIVNLIYEALSNP 272
            R     G       K+IPLF+  +  GG L   G G     W+H DD    I   L+  
Sbjct: 176 TRCCNNYGP-YQHPEKLIPLFVTNLLDGGTLPLYGDGANVREWVHTDDHCRGIALVLAGG 234

Query: 273 SYRGVINGTAPNPVRLAEMCDHLGNVLGRP 302
               + +      +   E+   L + LG  
Sbjct: 235 RAGEIYHIGGGLELTNRELTGILLDSLGAD 264

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 252

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 83.3 bits (204), Expect = 5e-19
 Identities = 38/259 (14%), Positives = 78/259 (30%), Gaps = 13/259 (5%)

Query: 48  ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEE 107
           A+  TV VTGA+G  G+ + ++L+  + +       RS       G +   F G +   +
Sbjct: 1   ANLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIGGEADVFIGDITDAD 60

Query: 108 PQWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVL 167
                  QG  A+V L       +   +  K  +   I    +  + ++   +  +    
Sbjct: 61  SINPAF-QGIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAA 119

Query: 168 VSATALGYYGTSETEVFDESSPSGNDYL-AEVCREWEGTALKVNKDVRLALIRIGIVLGK 226
             A              +   P         +  + +      +      +IR G +L K
Sbjct: 120 KVAGVKHIVVVGSMGGTNPDHPLNKLGNGNILVWKRKAEQYLADSGTPYTIIRAGGLLDK 179

Query: 227 DGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRG----VINGTA 282
           +GG       +  +  G      Q     +   D+  +  +AL     +     + +   
Sbjct: 180 EGG-------VRELLVGKDDELLQTDTKTVPRADVAEVCIQALLFEEAKNKAFDLGSKPE 232

Query: 283 PNPVRLAEMCDHLGNVLGR 301
                  +       V  R
Sbjct: 233 GTSTPTKDFKALFSQVTSR 251

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]} Length = 350

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

 Score = 82.8 bits (203), Expect = 2e-18
 Identities = 43/298 (14%), Positives = 84/298 (28%), Gaps = 31/298 (10%)

Query: 50  QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSK--AELIFPGKKTRFFPGVMIAEE 107
           + T++V GATG  G  L++   A  H VR    S     AE +        F G ++   
Sbjct: 3   KKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQAIPNVTLFQGPLLNNV 62

Query: 108 PQWRDCIQGSTA--VVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPS 165
           P      +G+    +   +          ++    K +                  ++  
Sbjct: 63  PLMDTLFEGAHLAFINTTSQAGDEIAIGKDLADAAKRAGT----------------IQHY 106

Query: 166 VLVSATALGYYGTSETEVFDESSPSGNDYLAEVCREWEGTALKVNKDVRLALIRIGIVLG 225
           +  S      YG            +  +Y+ ++              V   +        
Sbjct: 107 IYSSMPDHSLYGPWPAVPMWAPKFTVENYVRQLGLPST--------FVYAGIYNNNFTSL 158

Query: 226 KDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPS--YRGVINGTAP 283
                  +++P        P              D+   + +   +    + G       
Sbjct: 159 PYPLFQMELMPDGTFEWHAPFDPDIPLPWLDAEHDVGPALLQIFKDGPQKWNGHRIALTF 218

Query: 284 NPVRLAEMCDHLGNVLGRP-SWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFP 340
             +   ++C      L R  +++ VP+  +K  +  G    LE   VV    K   FP
Sbjct: 219 ETLSPVQVCAAFSRALNRRVTYVQVPKVEIKVNIPVGYREQLEAIEVVFGEHKAPYFP 276

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 312

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 82.4 bits (203), Expect = 2e-18
 Identities = 48/264 (18%), Positives = 92/264 (34%), Gaps = 25/264 (9%)

Query: 55  VTGATGFIGRRLVQRLQADNHQVRVLTR-SRSKAELIFPGKKTRFFPGVMIAEEPQWRDC 113
           +TG  GF+G  L  +L  D H+V V+      +   +             +         
Sbjct: 6   ITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIG---HENFELINHDVVEPL 62

Query: 114 IQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATAL 173
                 + +LA  P           +  ++    T  ++ L      G R  +L+++T+ 
Sbjct: 63  YIEVDQIYHLAS-PASPPNYMYNPIKTLKTNTIGTLNMLGLAKRV--GAR--LLLASTS- 116

Query: 174 GYYGTSETEVFDESSPSGNDYL--------AEVCREWEGTALKVNKDVRLALIRIGIVLG 225
             YG  E     E      + +         +   E    A    + V + + RI    G
Sbjct: 117 EVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFG 176

Query: 226 -KDGGALAKMIPLFM--MFAGGPL---GSGQQWFSWIHLDDIVNLIYEALSNPSYRGVIN 279
            +      +++  F+     G PL   GSG Q  ++ ++ D+VN +   + N +    +N
Sbjct: 177 PRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALM-NSNVSSPVN 235

Query: 280 GTAPNPVRLAEMCDHLGNVLGRPS 303
              P    + E    + N++G  S
Sbjct: 236 LGNPEEHTILEFAQLIKNLVGSGS 259

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 361

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

 Score = 77.1 bits (189), Expect = 2e-16
 Identities = 46/277 (16%), Positives = 92/277 (33%), Gaps = 36/277 (12%)

Query: 51  MTVSVTGATGFIGRRLVQRLQADNHQVRV----LTRSRSKAELIFPGKKTRF-FPGVMIA 105
           M + +TG  GFIG  +V+ +  +     V    LT + +   L    +  R+ F    I 
Sbjct: 1   MKILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADIC 60

Query: 106 EEPQWRDCIQGS--TAVVNLAGTP-----------------IGTRWSSEIKKEIKESRIR 146
           +  +     +     AV++LA                    +GT    E+ ++   +   
Sbjct: 61  DSAEITRIFEQYQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGE 120

Query: 147 VTSKVVDLINESPE---GVRPSVLVSATALGYYGTSETEVFDESSPSGNDYLAEVCREWE 203
                    + S +   G  P       ++     +ET  +  SSP      ++   +  
Sbjct: 121 DKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETTAYAPSSPYS---ASKASSDHL 177

Query: 204 GTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFM--MFAGGPL---GSGQQWFSWIHL 258
             A +    +   +       G       K+IPL +     G PL   G G Q   W+++
Sbjct: 178 VRAWRRTYGLPTIVTNCSNNYGP-YHFPEKLIPLVILNALEGKPLPIYGKGDQIRDWLYV 236

Query: 259 DDIVNLIYEALSNPSYRGVINGTAPNPVRLAEMCDHL 295
           +D    ++  ++        N    N  +  ++   +
Sbjct: 237 EDHARALHMVVTEGKAGETYNIGGHNEKKNLDVVFTI 273

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 205

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 72.8 bits (177), Expect = 1e-15
 Identities = 29/228 (12%), Positives = 61/228 (26%), Gaps = 33/228 (14%)

Query: 49  SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEP 108
           +   +++ GATG  G   + +     ++V VL R  S+     P         V+ A   
Sbjct: 2   AVKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEGPRPAHVVVGDVLQAA-- 59

Query: 109 QWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLV 168
                + G  AV+ L GT          + ++  + +        +      GV   V  
Sbjct: 60  DVDKTVAGQDAVIVLLGT----------RNDLSPTTVMSEGARNIVAAMKAHGVDKVVAC 109

Query: 169 SATALGYYGTSETEVFDESSPSGNDYLAEVCREWEGTALKVNKDVRLALIRIGIVLGKDG 228
           ++                 + + +           G             +    +  +  
Sbjct: 110 TSA--FLLWDPTKVPPRLQAVTDDHIRMHKVLRESGLKYVA--------VMPPHIGDQPL 159

Query: 229 GALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRG 276
                +              G+     I   D+ + +   L+   Y G
Sbjct: 160 TGAYTV-----------TLDGRGPSRVISKHDLGHFMLRCLTTDEYDG 196

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]} Length = 312

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

 Score = 72.1 bits (175), Expect = 7e-15
 Identities = 34/283 (12%), Positives = 81/283 (28%), Gaps = 36/283 (12%)

Query: 51  MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAEL-------IFPGKKTRFFPGVM 103
             V + G TG+IG+R+V    +  H   VL R    + +        F     +      
Sbjct: 4   SRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEA-S 62

Query: 104 IAEEPQWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVR 163
           + +  +  D ++    V++     + +    E  K ++  +     K             
Sbjct: 63  LDDHQRLVDALKQVDVVISALAGGVLSHHILEQLKLVEAIKEAGNIKRF----------- 111

Query: 164 PSVLVSATALGYYGTSETEVFDESSPSGNDYLAEVCREWEGTALKVNKDVRLALIRIGIV 223
                         +      D    +          + +         +    +   + 
Sbjct: 112 ------------LPSEFGMDPDIMEHALQPGSITFIDKRKVRRAIEAASIPYTYVSSNMF 159

Query: 224 LGKDGGALAKMIPLFMMFAGGPL--GSGQQWFSWIHLDDIVNLIYEALSNPSYRG--VIN 279
            G   G+LA++    M      L  G G     W+  DD+     +++ +P      +  
Sbjct: 160 AGYFAGSLAQLDGHMMPPRDKVLIYGDGNVKGIWVDEDDVGTYTIKSIDDPQTLNKTMYI 219

Query: 280 GTAPNPVRLAEMCDHLGNVLGRP-SWLPVPEFALKAVLGEGAF 321
               N +   E+      +  +    + +      A + + ++
Sbjct: 220 RPPMNILSQKEVIQIWERLSEQNLDKIYISSQDFLADMKDKSY 262

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]} Length = 307

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

 Score = 67.5 bits (163), Expect = 2e-13
 Identities = 36/279 (12%), Positives = 77/279 (27%), Gaps = 29/279 (10%)

Query: 49  SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFF--PGVMIAE 106
           S+  + + GATG+IGR + +      H   +L R  + +      +    F   G  I  
Sbjct: 2   SRSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVH 61

Query: 107 EPQWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSV 166
                                       E +  I ++   V +                 
Sbjct: 62  GSIDDHASLVEAVKNVDVVISTVGSLQIESQVNIIKAIKEVGTVK--------------- 106

Query: 167 LVSATALGYYGTSETEVFDESSPSGNDYLAEVCREWEGTALKVNKDVRLALIRIGIVLGK 226
                    +  SE     ++  +     +    + +       + +    +      G 
Sbjct: 107 --------RFFPSEFGNDVDNVHAVEPAKSVFEVKAKVRRAIEAEGIPYTYVSSNCFAGY 158

Query: 227 DGGALAKMIPLFM-MFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRG--VINGTAP 283
              +LA+             LG G     ++  +DI     +A+ +P      +      
Sbjct: 159 FLRSLAQAGLTAPPRDKVVILGDGNARVVFVKEEDIGTFTIKAVDDPRTLNKTLYLRLPA 218

Query: 284 NPVRLAEMCDHLGNVLGRP-SWLPVPEFALKAVLGEGAF 321
           N + L E+       + +      VPE  +  ++ +  F
Sbjct: 219 NTLSLNELVALWEKKIDKTLEKAYVPEEEVLKLIADTPF 257

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} Length = 357

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

 Score = 66.0 bits (160), Expect = 1e-12
 Identities = 49/326 (15%), Positives = 93/326 (28%), Gaps = 27/326 (8%)

Query: 52  TVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRS----------KAELIFPGKKTRFFPG 101
              +TG TG  G  L + L    ++V  + R  S            +      K     G
Sbjct: 3   VALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYG 62

Query: 102 VMIAEEPQWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEG 161
            +       R   +     V   G       S E  +   +     T ++++ I      
Sbjct: 63  DLSDTSNLTRILREVQPDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLE 122

Query: 162 VRPSVLVSATALGYYGTSETEVFDESSPSG--NDY-LAEVCREWEGTALKVNKDVRLALI 218
            +     ++T+   YG  +     E++P    + Y +A++   W     + +  +     
Sbjct: 123 KKTRFYQASTS-ELYGLVQEIPQKETTPFYPRSPYAVAKLYAYWITVNYRESYGMYACNG 181

Query: 219 RIGIVLGKDGG---ALAKMIPLFMMFAGG-----PLGSGQQWFSWIHLDDIVNLIYEALS 270
            +        G      K+       A G      LG+      W H  D V + +  L 
Sbjct: 182 ILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYVKMQWMMLQ 241

Query: 271 NPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWL----PVPEFALKAVLGEGAFVVLEG 326
                  +  T      + +  +     LG            +  + +V G  A  V  G
Sbjct: 242 QEQPEDFVIAT-GVQYSVRQFVEMAAAQLGIKLRFEGTGVEEKGIVVSVTGHDAPGVKPG 300

Query: 327 QRVVPARAKELGFPFKYRYVKDALKA 352
             ++    +          + D  KA
Sbjct: 301 DVIIAVDPRYFRPAEVETLLGDPTKA 326

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]} Length = 321

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 64.3 bits (155), Expect = 3e-12
 Identities = 35/246 (14%), Positives = 69/246 (28%), Gaps = 19/246 (7%)

Query: 52  TVSVTGATGFIGRRLVQRLQADNHQVRVLTR-----SRSKAELIFPGKKTRFFPGVMIAE 106
           +  VTG TG  G  L + L    ++V  L       +R +   +      ++  G M   
Sbjct: 2   SALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMADA 61

Query: 107 EPQWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSV 166
               R  I+     V           S               + +++ I +     R   
Sbjct: 62  CSVQRAVIKAQPQEVYNLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQ 121

Query: 167 LVSATALGYYGTSETEVFDESSPSGND---YLAEVCREWEGTALKVNKDVRLALIRIGIV 223
             ++     +G  + E  DE++P        +A++   W     + +  +  +   +   
Sbjct: 122 ASTSE---MFGLIQAERQDENTPFYPRSPYGVAKLYGHWITVNYRESFGLHASSGILFNH 178

Query: 224 LG---KDGGALAKMIPLFMMFAGG-----PLGSGQQWFSWIHLDDIVNLIYEALSNPSYR 275
                       K+         G      LG+      W    D V  ++  L      
Sbjct: 179 ESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKRDWGFAGDYVEAMWLMLQQDKAD 238

Query: 276 GVINGT 281
             +  T
Sbjct: 239 DYVVAT 244

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]} Length = 341

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 64.2 bits (155), Expect = 4e-12
 Identities = 40/276 (14%), Positives = 73/276 (26%), Gaps = 25/276 (9%)

Query: 47  KASQMTVSVTGATGFIGRRLVQRLQADNHQVRV---LTRSRSKA-----ELIFPGKKTRF 98
            A      +TG  GFIG  L++ L   + +V           +       L+   + + F
Sbjct: 13  PAQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNF 72

Query: 99  FPGVMIAEEPQWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINES 158
                        +        V           S         + I     ++    + 
Sbjct: 73  KFIQGDIRNLDDCNNACAGVDYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARD- 131

Query: 159 PEGVRPSVLVSATALGYYGTSETEVFDESSPSG--NDYLAEVCR-EWEGTALKVNKDVRL 215
               +      A +   YG        E +     + Y       E              
Sbjct: 132 ---AKVQSFTYAASSSTYGDHPGLPKVEDTIGKPLSPYAVTKYVNELYADVFSRCYGFST 188

Query: 216 ALIRIGIVLGKDG---GALAKMIPLFM--MFAGGPL---GSGQQWFSWIHLDDIVNLIYE 267
             +R   V G+     GA A +IP +   M  G  +   G G+    + ++++ V     
Sbjct: 189 IGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETSRDFCYIENTVQANLL 248

Query: 268 ALSNPS--YRGVINGTAPNPVRLAEMCDHLGNVLGR 301
           A +        V N        L ++   L + L  
Sbjct: 249 AATAGLDARNQVYNIAVGGRTSLNQLFFALRDGLAE 284

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} Length = 342

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

 Score = 63.7 bits (153), Expect = 6e-12
 Identities = 44/334 (13%), Positives = 82/334 (24%), Gaps = 42/334 (12%)

Query: 52  TVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWR 111
            V VTGA GF+   +V++L    ++VR   RS SK   +      ++      A      
Sbjct: 13  LVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDML 72

Query: 112 D--CIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVS 169
                                   S    E+    I  T   +     +P   R  +  S
Sbjct: 73  KQGAYDEVIKGAAGVAHIASVVSFSNKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSS 132

Query: 170 ATALGYYGTSETEVFDESSPSGNDYLAEVCREWEGTALK------VNKDVRLALIR---- 219
             +      +   ++ +      + + +     E    K       +K            
Sbjct: 133 TVSALIPKPNVEGIYLDEKSWNLESIDKAKTLPESDPQKSLWVYAASKTEAELAAWKFMD 192

Query: 220 ----------------IGIVLGKDGGALAKMIPLFMMFAGG--PLGSGQQWFSWIHLDDI 261
                           IG +   +  + +    +  +F G   P  +      ++   DI
Sbjct: 193 ENKPHFTLNAVLPNYTIGTIFDPETQSGSTSGWMMSLFNGEVSPALALMPPQYYVSAVDI 252

Query: 262 VNLIYEALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAF 321
             L    L  P                  +      +         P     A   +   
Sbjct: 253 GLLHLGCLVLPQIERRRVYGTAGTFDWNTVLATFRKLY--------PSKTFPADFPDQGQ 304

Query: 322 VVLEGQRVVPARA-KELGFPFKY---RYVKDALK 351
            + +          K LG P        +KD + 
Sbjct: 305 DLSKFDTAPSLEILKSLGRPGWRSIEESIKDLVG 338

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} Length = 347

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 61.1 bits (147), Expect = 4e-11
 Identities = 39/292 (13%), Positives = 80/292 (27%), Gaps = 23/292 (7%)

Query: 55  VTGATGFIGRRLVQRLQADNHQVRVLTRSRS-----------KAELIFPGKKTRFFPGVM 103
           +TG TG  G  L + L    ++V  + R  S           K          +   G +
Sbjct: 6   ITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDL 65

Query: 104 IAEEPQWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVR 163
                  +   +     +   G     + S ++ +   +     T +++D +        
Sbjct: 66  TDSTCLVKIINEVKPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINS 125

Query: 164 PSVLVSATALGYYGTSETEVFDESSPSG--NDY-LAEVCREWEGTALKVNKDVRLALIRI 220
                ++T+   YG  +     E++P    + Y  A++   W     +   ++      +
Sbjct: 126 VKFYQASTS-ELYGKVQEIPQKETTPFYPRSPYGAAKLYAYWIVVNFREAYNLFAVNGIL 184

Query: 221 GIVLG---KDGGALAKMIPLFMMFAGGP-----LGSGQQWFSWIHLDDIVNLIYEALSNP 272
                          K+         G      LG+      W H  D V  ++  L N 
Sbjct: 185 FNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWGHAKDYVEAMWLMLQND 244

Query: 273 SYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVL 324
                +  T         +     ++     W    E  +      G   V 
Sbjct: 245 EPEDFVIATGEVHSVREFVEKSFLHIGKTIVWEGKNENEVGRCKETGKVHVT 296

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} Length = 338

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

 Score = 59.2 bits (142), Expect = 2e-10
 Identities = 49/288 (17%), Positives = 93/288 (32%), Gaps = 41/288 (14%)

Query: 51  MTVSVTGATGFIGRRLVQRLQADNHQVRVL------TRSRSKAELIFPGKKTRFFPG-VM 103
           M V VTG +G+IG     +L  + H V +L       RS         GK   F  G + 
Sbjct: 1   MRVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIR 60

Query: 104 IAEEPQWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVR 163
                           V++ AG       S +   E  ++ +  T +++  +  +     
Sbjct: 61  NEALMTEILHDHAIDTVIHFAG-LKAVGESVQKPLEYYDNNVNGTLRLISAMRAA----N 115

Query: 164 PSVLVSATALGYYGTSETEVFDESSPSGNDYLAEVCREWEGTALKVN-----KDVRLALI 218
               + +++   YG      + ES P+G         +     +  +      D  +AL+
Sbjct: 116 VKNFIFSSSATVYGDQPKIPYVESFPTGTPQSPYGKSKLMVEQILTDLQKAQPDWSIALL 175

Query: 219 RIGIVLG---------KDGGALAKMIPLFMMFAGG------------PLGSGQQWFSWIH 257
           R    +G            G    ++P     A G            P   G     +IH
Sbjct: 176 RYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIH 235

Query: 258 LDDIVNLIYEALSNPSYR---GVINGTAPNPVRLAEMCDHLGNVLGRP 302
           + D+ +    A+   + +    + N  A     + ++ +      G+P
Sbjct: 236 VMDLADGHVVAMEKLANKPGVHIYNLGAGVGNSVLDVVNAFSKACGKP 283

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 363

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 56.1 bits (134), Expect = 2e-09
 Identities = 38/278 (13%), Positives = 73/278 (26%), Gaps = 38/278 (13%)

Query: 51  MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG----------------K 94
           + +S+TGA GFI   + +RL+ + H V      +++                       K
Sbjct: 16  LKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTEDMFCDEFHLVDLRVMENCLK 75

Query: 95  KTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDL 154
            T     V              S   V +    + +    E  +     R    S     
Sbjct: 76  VTEGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASSACIY 135

Query: 155 INESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDYLAEVCREWEGTALKVNKDVR 214
                                   S+    +     G   L ++  E        +  + 
Sbjct: 136 PEFKQLETTNV---------SLKESDAWPAEPQDAFG---LEKLATEELCKHYNKDFGIE 183

Query: 215 LALIRIGIVLGKDG---------GALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLI 265
             + R   + G  G          A                G G Q  S+  +D+ V  +
Sbjct: 184 CRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDECVEGV 243

Query: 266 YEALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPS 303
                +  +R  +N  +   V + EM + + +   +  
Sbjct: 244 LRLTKSD-FREPVNIGSDEMVSMNEMAEMVLSFEEKKL 280

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]} Length = 315

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

 Score = 54.9 bits (131), Expect = 4e-09
 Identities = 37/279 (13%), Positives = 79/279 (28%), Gaps = 48/279 (17%)

Query: 55  VTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCI 114
           + G  G +G  + ++L+       VL R+R +  L+       FF    I          
Sbjct: 7   IAGHRGMVGSAIRRQLEQRGDVELVL-RTRDELNLLDSRAVHDFFASERI---------- 55

Query: 115 QGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALG 174
                V   A    G   ++    +     + + S ++   +++   V   + + ++   
Sbjct: 56  ---DQVYLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQN--DVNKLLFLGSSC-- 108

Query: 175 YYGTSETEVFDESS-------PSGNDY-LAEVCREWEGTALKVNKDVRLALIRIGIVLGK 226
            Y     +   ES        P+   Y +A++       +           +    + G 
Sbjct: 109 IYPKLAKQPMAESELLQGTLEPTNEPYAIAKIAGIKLCESYNRQYGRDYRSVMPTNLYGP 168

Query: 227 DGG----------ALAKMIPLFMMFAGGPL---GSGQQWFSWIHLDDIVNLIYEALSNPS 273
                        AL +            +   GSG     ++H+DD+       +    
Sbjct: 169 HDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSGTPMREFLHVDDMAAASIHVMELAH 228

Query: 274 YR---------GVINGTAPNPVRLAEMCDHLGNVLGRPS 303
                        IN        + E+   +  V+G   
Sbjct: 229 EVWLENTQPMLSHINVGTGVDCTIRELAQTIAKVVGYKG 267

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 346

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

 Score = 55.0 bits (131), Expect = 4e-09
 Identities = 52/323 (16%), Positives = 94/323 (29%), Gaps = 33/323 (10%)

Query: 51  MTVSVTGATGFIGRRLVQRLQADNHQVRV-----LTRSRSKAEL-IFPGKKTRFFPGVMI 104
             + VTG  GFIG   V  +  ++  V V     LT + +KA L    G +     G  I
Sbjct: 3   KNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAILGDRVELVVG-DI 61

Query: 105 AEEPQWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRP 164
           A+          + A+V+ A        S         +    T     L       +R 
Sbjct: 62  ADAELVDKLAAKADAIVHYA-AESHNDNSLNDPSPFIHTNFIGT--YTLLEAARKYDIRF 118

Query: 165 SVLVSATALGYYGTSET---------EVFDESSPSG--NDY-LAEVCREWEGTALKVNKD 212
             + +    G     E          E F   +     + Y   +   +    A   +  
Sbjct: 119 HHVSTDEVYGDLPLREDLPGHGEGPGEKFTAETNYNPSSPYSSTKAASDLIVKAWVRSFG 178

Query: 213 VRLALIRIGIVLGKDGGALAKMIPLFMMFAGG----PLGSGQQWFSWIHLDDIVNLIYEA 268
           V+  +       G        +         G      G G+    WIH +D    ++  
Sbjct: 179 VKATISNCSNNYGPYQHIEKFIPRQITNILAGIKPKLYGEGKNVRDWIHTNDHSTGVWAI 238

Query: 269 LSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQR 328
           L+           A       E+ + +   +G+P         +    G      ++  +
Sbjct: 239 LTKGRMGETYLIGADGEKNNKEVLELILEKMGQPKDAYDH---VTDRAGHDLRYAIDASK 295

Query: 329 VVPARAKELGFPFKYRYVKDALK 351
               R  ELG+  ++    + L+
Sbjct: 296 ---LR-DELGWTPQFTDFSEGLE 314

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]} Length = 212

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 52.1 bits (123), Expect = 1e-08
 Identities = 10/38 (26%), Positives = 19/38 (50%)

Query: 49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSK 86
          +   V + GATG  G  L+ R+ ++    +V+  +R  
Sbjct: 1  TPKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKA 38

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]} Length = 232

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.4 bits (116), Expect = 1e-07
 Identities = 27/232 (11%), Positives = 60/232 (25%), Gaps = 25/232 (10%)

Query: 47  KASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAE 106
           +    +V + GA+G  GR L++ +       +V    R K        K      V   +
Sbjct: 11  RMQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYKNVNQEVVDFEK 70

Query: 107 EPQWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSV 166
              +    QG        GT  G   +    +  ++  ++                    
Sbjct: 71  LDDYASAFQGHDVGFCCLGTTRGKAGAEGFVRVDRDYVLKSAELAK-------------- 116

Query: 167 LVSATALGYYGTSETEVFDESSPSGNDYLAEVCREWEGTALKVNKDVRLALI-RIGIVLG 225
                     G     +        +     +  + E  A           + R G++L 
Sbjct: 117 --------AGGCKHFNLLSSKGADKSSNFLYLQVKGEVEAKVEELKFDRYSVFRPGVLLC 168

Query: 226 KDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRGV 277
                 ++     +    G L         + +  +V  +   +  P  + +
Sbjct: 169 D--RQESRPGEWLVRKFFGSLPDSWASGHSVPVVTVVRAMLNNVVRPRDKQM 218

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.8 bits (112), Expect = 9e-07
 Identities = 37/285 (12%), Positives = 72/285 (25%), Gaps = 37/285 (12%)

Query: 55  VTGATGFIGRRLVQRLQADNHQVRVL-------TRSRSKAELI-----FPGKKTRFFPGV 102
           VTG  G+IG   V  L    +   V+           S  E +       G+   F    
Sbjct: 7   VTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMD 66

Query: 103 MIAEEPQWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGV 162
           ++ +    R   + S   V           S +   +     +  T ++++++       
Sbjct: 67  ILDQGALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHGVKN 126

Query: 163 RPSVLVSATALGYYGTSETEVFDESSPSGNDYLAEVCREWEGTAL-KVNKDVRLALIRIG 221
                 +            E       +     ++   E     L + +K     L+R  
Sbjct: 127 LVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIRDLCQADKTWNAVLLRYF 186

Query: 222 IVLG---------KDGGALAKMIPLFMMFAGG------------PLGSGQQWFSWIHLDD 260
              G            G    ++P     A G                G     +IH+ D
Sbjct: 187 NPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDGTGVRDYIHVVD 246

Query: 261 IVN---LIYEALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRP 302
           +          L       + N        + +M   +    G+ 
Sbjct: 247 LAKGHIAALRKLKEQCGCRIYNLGTGTGYSVLQMVQAMEKASGKK 291

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]} Length = 342

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

 Score = 47.6 bits (111), Expect = 1e-06
 Identities = 15/52 (28%), Positives = 20/52 (38%), Gaps = 1/52 (1%)

Query: 51  MTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRSKAELIFPGKKTRFFPG 101
           M V + G  GFIG  L +RL  ++H +V  L                 F  G
Sbjct: 1   MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHFVEG 52

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]} Length = 281

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

 Score = 46.7 bits (109), Expect = 2e-06
 Identities = 10/33 (30%), Positives = 18/33 (54%)

Query: 51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRS 83
          M + +TGA G +GR + ++L+  N +V      
Sbjct: 2  MKILITGANGQLGREIQKQLKGKNVEVIPTDVQ 34

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]} Length = 298

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

 Score = 44.5 bits (103), Expect = 8e-06
 Identities = 8/35 (22%), Positives = 16/35 (45%)

Query: 51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRS 85
          M + + G TG +G  L + L    + + +   S+ 
Sbjct: 1  MNILLFGKTGQVGWELQRSLAPVGNLIALDVHSKE 35

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]} Length = 338

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

 Score = 44.7 bits (104), Expect = 8e-06
 Identities = 46/286 (16%), Positives = 80/286 (27%), Gaps = 37/286 (12%)

Query: 55  VTGATGFIGRRLVQRLQADNHQVRV---LTRSRSKAELIFPGKKTRF-FPGVMIAEEPQW 110
           +TG  GF+G  L     +    + V   L+R  +   L +      F F    I  +   
Sbjct: 5   ITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNKNDV 64

Query: 111 RDCIQGS--TAVVNLAGTPIGTRWSSEIKKEIK------------ESRIRVTSKVVDLIN 156
              I      +  +LAG    T        + +              +      ++    
Sbjct: 65  TRLITKYMPDSCFHLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNIIYSST 124

Query: 157 ESPEGVRPSVLVSATALGYYGTSETEVFDESSPSG-------NDYLAEVCREWEGTALKV 209
               G       + T   Y    +   +DES+          +   A+           +
Sbjct: 125 NKVYGDLEQYKYNETETRYTCVDKPNGYDESTQLDFHSPYGCSKGAADQYMLDYARIFGL 184

Query: 210 NKDVRLALIRIGIVLGKDGGALAKMIPLFMMF-----AGGPL---GSGQQWFSWIHLDDI 261
           N  V       G                            P    G+G+Q    +H +D+
Sbjct: 185 NTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGINKPFTISGNGKQVRDVLHAEDM 244

Query: 262 VNLIYEALSNPS----YRGVINGTAPNPVRLAEMCDHLGNVLGRPS 303
           ++L + AL+N S        I GT  N + L E+   L +      
Sbjct: 245 ISLYFTALANVSKIRGNAFNIGGTIVNSLSLLELFKLLEDYCNIDM 290

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} Length = 356

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

 Score = 44.8 bits (104), Expect = 9e-06
 Identities = 13/40 (32%), Positives = 17/40 (42%)

Query: 52 TVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIF 91
           V VTG TGF G  L   LQ     V+  + +      +F
Sbjct: 10 RVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLF 49

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 339

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 43.9 bits (102), Expect = 1e-05
 Identities = 11/34 (32%), Positives = 15/34 (44%)

Query: 52 TVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRS 85
             +TG TG  G  L + L    ++V  L R  S
Sbjct: 3  IALITGITGQDGSYLTEFLLGKGYEVHGLIRRSS 36

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 393

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 43.8 bits (101), Expect = 2e-05
 Identities = 8/30 (26%), Positives = 13/30 (43%)

Query: 51 MTVSVTGATGFIGRRLVQRLQADNHQVRVL 80
            V V G  G+ G      L   N++V ++
Sbjct: 2  SRVMVIGGDGYCGWATALHLSKKNYEVCIV 31

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 347

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 43.1 bits (100), Expect = 3e-05
 Identities = 10/29 (34%), Positives = 13/29 (44%)

Query: 52 TVSVTGATGFIGRRLVQRLQADNHQVRVL 80
           V VTG  G+IG   V  L  + +   V 
Sbjct: 3  IVLVTGGAGYIGSHTVVELIENGYDCVVA 31

>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]} Length = 383

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Trypanosoma brucei [TaxId: 5691]

 Score = 42.5 bits (98), Expect = 5e-05
 Identities = 19/68 (27%), Positives = 28/68 (41%), Gaps = 4/68 (5%)

Query: 49  SQMTVSVTGATGFIGRRLVQRLQAD-NHQVRV---LTRSRSKAELIFPGKKTRFFPGVMI 104
           S M V V G  G+IG   V+ L  D NH V +   L  +  K++ +   +          
Sbjct: 1   SHMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSD 60

Query: 105 AEEPQWRD 112
             +P W D
Sbjct: 61  GPKPPWAD 68

>d2hjsa1 c.2.1.3 (A:3-129,A:320-336) Usg-1 protein homolog PA3116 {Pseudomonas aeruginosa [TaxId: 287]} Length = 144

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Usg-1 protein homolog PA3116
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 38.3 bits (88), Expect = 4e-04
 Identities = 13/67 (19%), Positives = 26/67 (38%), Gaps = 3/67 (4%)

Query: 51  MTVSVTGATGFIGRRLVQRLQADNH---QVRVLTRSRSKAELIFPGKKTRFFPGVMIAEE 107
           + V+V GATG +G  LV  L   +    ++ +L  + S  + +   + +     V   + 
Sbjct: 3   LNVAVVGATGSVGEALVGLLDERDFPLHRLHLLASAESAGQRMGFAESSLRVGDVDSFDF 62

Query: 108 PQWRDCI 114
                  
Sbjct: 63  SSVGLAF 69

>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 182

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Saccharopine reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

 Score = 38.5 bits (88), Expect = 4e-04
 Identities = 20/112 (17%), Positives = 40/112 (35%), Gaps = 9/112 (8%)

Query: 49  SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEP 108
           +  +V + G+ GF+ R  +  L     +V V  R+   A+ +  G +      + + ++ 
Sbjct: 1   ATKSVLMLGS-GFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGVQHSTPISLDVNDDA 59

Query: 109 QWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPE 160
                +     V++L                + +S IR    VV     SP 
Sbjct: 60  ALDAEVAKHDLVISL--------IPYTFHATVIKSAIRQKKHVVTTSYVSPA 103

>d1mb4a1 c.2.1.3 (A:1-132,A:355-369) Aspartate beta-semialdehyde dehydrogenase {Vibrio cholerae [TaxId: 666]} Length = 147

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Vibrio cholerae [TaxId: 666]

 Score = 37.7 bits (87), Expect = 5e-04
 Identities = 11/50 (22%), Positives = 19/50 (38%), Gaps = 4/50 (8%)

Query: 51 MTVSVTGATGFIGRRLVQRLQADNH----QVRVLTRSRSKAELIFPGKKT 96
          M V + G  G +G  L+QR+  +      +    + S+        GK  
Sbjct: 1  MRVGLVGWRGMVGSVLMQRMVEERDFDLIEPVFFSTSQIGVPAPNFGKDA 50

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]} Length = 245

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.1 bits (88), Expect = 7e-04
 Identities = 15/78 (19%), Positives = 32/78 (41%), Gaps = 2/78 (2%)

Query: 52  TVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELI--FPGKKTRFFPGVMIAEEPQ 109
            + +T A   IG+        +  +V     + SK + +  +PG +TR        +  Q
Sbjct: 8   VIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKYPGIQTRVLDVTKKKQIDQ 67

Query: 110 WRDCIQGSTAVVNLAGTP 127
           + + ++    + N+AG  
Sbjct: 68  FANEVERLDVLFNVAGFV 85

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]} Length = 307

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

 Score = 38.5 bits (87), Expect = 8e-04
 Identities = 10/27 (37%), Positives = 14/27 (51%), Gaps = 1/27 (3%)

Query: 55 VTGATGFIGRRLVQRLQADN-HQVRVL 80
          VTG  GFIG  +V+ L       + V+
Sbjct: 4  VTGGAGFIGSNIVKALNDKGITDILVV 30

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Length = 212

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

 Score = 37.7 bits (86), Expect = 9e-04
 Identities = 15/38 (39%), Positives = 22/38 (57%)

Query: 51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAE 88
          M V++ G TG +G+ L  RL    H++ V +R   KAE
Sbjct: 1  MRVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAE 38

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} Length = 250

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 36.4 bits (83), Expect = 0.003
 Identities = 14/41 (34%), Positives = 21/41 (51%)

Query: 49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAEL 89
          S  +V VTGA   IG  LVQ+L  D +   ++  +R   + 
Sbjct: 2  SPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKA 42

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	355
d2b69a1	312	UDP-glucuronate decarboxylase 1 {Human (Homo sapie	100.0
d1db3a_	357	GDP-mannose 4,6-dehydratase {Escherichia coli [Tax	100.0
d1r6da_	322	dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces	100.0
d2c5aa1	363	GDP-mannose-3', 5'-epimerase {Thale cress (Arabido	100.0
d1sb8a_	341	UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo	100.0
d1kewa_	361	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	100.0
d1oc2a_	346	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	100.0
d1udca_	338	Uridine diphosphogalactose-4-epimerase (UDP-galact	100.0
d1rpna_	321	GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos	100.0
d1e6ua_	315	GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (	100.0
d1t2aa_	347	GDP-mannose 4,6-dehydratase {Human (Homo sapiens)	100.0
d2blla1	342	Polymyxin resistance protein ArnA (PrmI) {Escheric	100.0
d1ek6a_	346	Uridine diphosphogalactose-4-epimerase (UDP-galact	100.0
d1i24a_	393	Sulfolipid biosynthesis protein SQD1 {Thale cress	100.0
d1n7ha_	339	GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop	100.0
d1z45a2	347	Uridine diphosphogalactose-4-epimerase (UDP-galact	100.0
d1gy8a_	383	Uridine diphosphogalactose-4-epimerase (UDP-galact	100.0
d1y1pa1	342	Aldehyde reductase II {Sporobolomyces salmonicolor	100.0
d1vl0a_	281	DTDP-4-dehydrorhamnose reductase RfbD {Clostridium	100.0
d1orra_	338	CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId:	100.0
d1rkxa_	356	CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc	100.0
d1eq2a_	307	ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric	99.98
d1n2sa_	298	dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S	99.97
d1qyda_	312	Pinoresinol-lariciresinol reductase {Giant arborvi	99.95
d1qyca_	307	Phenylcoumaran benzylic ether reductase {Loblolly	99.95
d1hdoa_	205	Biliverdin IX beta reductase {Human (Homo sapiens)	99.94
d2bkaa1	232	TAT-interacting protein TIP30 {Human (Homo sapiens	99.94
d2q46a1	252	Hypothetical protein At5g02240 (T7H20_290) {Thale	99.92
d2a35a1	212	Hypothetical protein PA4017 {Pseudomonas aeruginos	99.9
d1xgka_	350	Negative transcriptional regulator NmrA {Aspergill	99.88
d1pr9a_	244	Carbonyl reductase {Human (Homo sapiens) [TaxId: 9	99.77
d1uzma1	237	beta-keto acyl carrier protein reductase {Mycobact	99.76
d1cyda_	242	Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1	99.75
d1nffa_	244	Putative oxidoreductase Rv2002 {Mycobacterium tube	99.75
d1ulsa_	242	beta-keto acyl carrier protein reductase {Thermus	99.75
d1ydea1	250	Retinal dehydrogenase/reductase 3 {Human (Homo sap	99.74
d2d1ya1	248	Hypothetical protein TTHA0369 {Thermus thermophilu	99.74
d1geea_	261	Glucose dehydrogenase {Bacillus megaterium [TaxId:	99.73
d1vl8a_	251	Gluconate 5-dehydrogenase {Thermotoga maritima [Ta	99.73
d1zk4a1	251	R-specific alcohol dehydrogenase {Lactobacillus br	99.73
d1o5ia_	234	beta-keto acyl carrier protein reductase {Thermoto	99.72
d1q7ba_	243	beta-keto acyl carrier protein reductase {Escheric	99.72
d1fmca_	255	7-alpha-hydroxysteroid dehydrogenase {Escherichia	99.72
d1hdca_	254	3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre	99.72
d2c07a1	251	beta-keto acyl carrier protein reductase {Malaria	99.71
d2ew8a1	247	(s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb	99.71
d1k2wa_	256	Sorbitol dehydrogenase {Rhodobacter sphaeroides [T	99.71
d1x1ta1	260	D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas	99.7
d2ae2a_	259	Tropinone reductase {Jimsonweed (Datura stramonium	99.7
d1iy8a_	258	Levodione reductase {Corynebacterium aquaticum [Ta	99.69
d1gega_	255	meso-2,3-butanediol dehydrogenase {Klebsiella pneu	99.68
d1xq1a_	259	Tropinone reductase {Thale cress (Arabidopsis thal	99.68
d1ae1a_	258	Tropinone reductase {Jimsonweed (Datura stramonium	99.68
d2bgka1	268	Rhizome secoisolariciresinol dehydrogenase {Mayapp	99.68
d1zema1	260	Xylitol dehydrogenase {Gluconobacter oxydans [TaxI	99.68
d1hxha_	253	3beta/17beta hydroxysteroid dehydrogenase {Comamon	99.67
d1yxma1	297	Peroxisomal trans 2-enoyl CoA reductase {Human (Ho	99.67
d1zmta1	252	Halohydrin dehalogenase HheC {Agrobacterium tumefa	99.67
d2rhca1	257	beta-keto acyl carrier protein reductase {Streptom	99.67
d2a4ka1	241	beta-keto acyl carrier protein reductase {Thermus	99.65
d2gdza1	254	15-hydroxyprostaglandin dehydrogenase, PGDH {Human	99.65
d1g0oa_	272	1,3,8-trihydroxynaphtalene reductase (THNR, naphto	99.65
d1ulua_	256	Enoyl-ACP reductase {Thermus thermophilus [TaxId:	99.65
d1edoa_	244	beta-keto acyl carrier protein reductase {Oil seed	99.65
d2ag5a1	245	Dehydrogenase/reductase SDR family member 6, DHRS6	99.64
d2bd0a1	240	Bacterial sepiapterin reductase {Chlorobium tepidu	99.64
d1spxa_	264	Glucose dehydrogenase (5l265) {Nematode (Caenorhab	99.64
d1h5qa_	260	Mannitol dehydrogenase {Mushroom (Agaricus bisporu	99.63
d1ja9a_	259	1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl	99.62
d1sbya1	254	Drosophila alcohol dehydrogenase {Fly (Drosophila	99.61
d1yb1a_	244	17-beta-hydroxysteroid dehydrogenase type XI {Huma	99.61
d1xhla_	274	Hypothetical protein F25D1.5 {Caenorhabditis elega	99.61
d1gz6a_	302	(3R)-hydroxyacyl-CoA dehydrogenase domain of estra	99.61
d1yo6a1	250	Putative carbonyl reductase sniffer {Caenorhabditi	99.6
d1xkqa_	272	Hypothetical protein R05D8.7 {Caenorhabditis elega	99.58
d1xg5a_	257	Putative dehydrogenase ARPG836 (MGC4172) {Human (H	99.58
d1dhra_	236	Dihydropteridin reductase (pteridine reductase) {R	99.58
d1w6ua_	294	2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H	99.57
d1bdba_	276	Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps	99.56
d2fr1a1	259	Erythromycin synthase, eryAI, 1st ketoreductase mo	99.55
d1jtva_	285	Human estrogenic 17beta-hydroxysteroid dehydrogena	99.51
d1ooea_	235	Dihydropteridin reductase (pteridine reductase) {N	99.51
d1snya_	248	Carbonyl reductase sniffer {Fruit fly (Drosophila	99.5
d1oaaa_	259	Sepiapterin reductase {Mouse (Mus musculus) [TaxId	99.49
d1qsga_	258	Enoyl-ACP reductase {Escherichia coli [TaxId: 562]	99.48
d1wmaa1	275	Carbonyl reductase/20beta-hydroxysteroid dehydroge	99.48
d2o23a1	248	Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho	99.45
d1xu9a_	269	11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom	99.42
d1uaya_	241	Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t	99.39
d2pd4a1	274	Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2	99.39
d1d7oa_	297	Enoyl-ACP reductase {Oil seed rape (Brassica napus	99.37
d1e7wa_	284	Dihydropteridin reductase (pteridine reductase) {L	99.33
d2h7ma1	268	Enoyl-ACP reductase {Mycobacterium tuberculosis, T	99.3
d1fjha_	257	3-alpha-hydroxysteroid dehydrogenase {Comamonas te	99.2
d1mxha_	266	Dihydropteridin reductase (pteridine reductase) {T	99.19
d1uh5a_	329	Enoyl-ACP reductase {Malaria parasite (Plasmodium	99.12
d1luaa1	191	Methylene-tetrahydromethanopterin dehydrogenase {M	99.04
d1mlda1	144	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	98.66
d1hyea1	145	MJ0490, lactate/malate dehydrogenase {Archaeon Met	98.43
d2cmda1	145	Malate dehydrogenase {Escherichia coli [TaxId: 562	98.38
d1ez4a1	146	Lactate dehydrogenase {Lactobacillus pentosus [Tax	98.38
d1t4ba1	146	Aspartate beta-semialdehyde dehydrogenase {Escheri	98.31
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	98.29
d1y7ta1	154	Malate dehydrogenase {Thermus thermophilus [TaxId:	98.28
d1e5qa1	182	Saccharopine reductase {Rice blast fungus (Magnapo	98.27
d7mdha1	175	Malate dehydrogenase {Sorghum (Sorghum vulgare), c	98.25
d1mb4a1	147	Aspartate beta-semialdehyde dehydrogenase {Vibrio	98.16
d1guza1	142	Malate dehydrogenase {Chlorobium vibrioforme [TaxI	98.12
d2f1ka2	165	Prephenate dehydrogenase TyrA {Synechocystis sp. p	98.11
d1y6ja1	142	Lactate dehydrogenase {Clostridium thermocellum [T	98.08
d1ks9a2	167	Ketopantoate reductase PanE {Escherichia coli [Tax	98.04
d1jaya_	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae	98.04
d1pzga1	154	Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5	98.02
d5mdha1	154	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	98.0
d1ojua1	142	Malate dehydrogenase {Archaeon Archaeoglobus fulgi	98.0
d1a5za1	140	Lactate dehydrogenase {Thermotoga maritima [TaxId:	97.99
d2hjsa1	144	Usg-1 protein homolog PA3116 {Pseudomonas aerugino	97.98
d1ldna1	148	Lactate dehydrogenase {Bacillus stearothermophilus	97.95
d1llda1	143	Lactate dehydrogenase {Bifidobacterium longum, str	97.94
d1o6za1	142	Malate dehydrogenase {Archaeon Haloarcula marismor	97.93
d1mv8a2	202	GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos	97.88
d1i0za1	160	Lactate dehydrogenase {Human (Homo sapiens), heart	97.88
d1gpja2	159	Glutamyl tRNA-reductase middle domain {Archaeon Me	97.87
d2hmva1	134	Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}	97.85
d1uxja1	142	Malate dehydrogenase {Chloroflexus aurantiacus [Ta	97.83
d1diha1	162	Dihydrodipicolinate reductase {Escherichia coli [T	97.81
d1iz0a2	171	Quinone oxidoreductase {Thermus thermophilus [TaxI	97.77
d2g17a1	179	N-acetyl-gamma-glutamyl-phosphate reductase ArgC {	97.73
d1v3va2	182	Leukotriene b4 12-hydroxydehydrogenase/prostagland	97.73
d1vkna1	176	N-acetyl-gamma-glutamyl-phosphate reductase ArgC {	97.72
d2cvoa1	183	Putative semialdehyde dehydrogenase {Rice (Oryza s	97.72
d2g5ca2	171	Prephenate dehydrogenase TyrA {Aquifex aeolicus [T	97.71
d1kjqa2	111	Glycinamide ribonucleotide transformylase PurT, N-	97.7
d2ahra2	152	Pyrroline-5-carboxylate reductase ProC {Streptococ	97.69
d1vpda2	161	Hydroxyisobutyrate dehydrogenase {Salmonella typhi	97.68
d1yb5a2	174	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	97.66
d3cuma2	162	Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru	97.64
d1i36a2	152	Conserved hypothetical protein MTH1747 {Archaeon M	97.61
d1hyha1	146	L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La	97.59
d1bg6a2	184	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A	97.59
d1pqwa_	183	Putative enoyl reductase domain of polyketide synt	97.59
d1txga2	180	Glycerol-3- phosphate dehydrogenase {Archaeoglobus	97.58
d1t2da1	150	Lactate dehydrogenase {Malaria parasite (Plasmodiu	97.58
d2ldxa1	159	Lactate dehydrogenase {Mouse (Mus musculus) [TaxId	97.56
d1o8ca2	77	Hypothetical protein YhdH {Escherichia coli [TaxId	97.52
d2pv7a2	152	Prephenate dehydrogenase TyrA {Haemophilus influen	97.52
d1n1ea2	189	Glycerol-3- phosphate dehydrogenase {Trypanosome (	97.52
d1vm6a3	128	Dihydrodipicolinate reductase {Thermotoga maritima	97.48
d1qora2	179	Quinone oxidoreductase {Escherichia coli [TaxId: 5	97.46
d1f0ya2	192	Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum	97.44
d1yqga2	152	Pyrroline-5-carboxylate reductase ProC {Neisseria	97.41
d2jfga1	93	UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase	97.4
d2pgda2	176	6-phosphogluconate dehydrogenase {Sheep (Ovis orie	97.35
d1u7za_	223	Coenzyme A biosynthesis bifunctional protein CoaBC	97.32
d2gz1a1	154	Aspartate beta-semialdehyde dehydrogenase {Strepto	97.32
d1xa0a2	176	B. subtilis YhfP homologue {Bacillus stearothermop	97.28
d1o89a2	177	Hypothetical protein YhdH {Escherichia coli [TaxId	97.25
d1tt7a2	167	Hypothetical protein YhfP {Bacillus subtilis [TaxI	97.24
d1uufa2	168	Hypothetical protein YahK {Escherichia coli [TaxId	97.17
d1piwa2	168	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	97.13
d1nyta1	170	Shikimate 5-dehydrogenase AroE {Escherichia coli [	97.05
d1pjqa1	113	Siroheme synthase CysG, domain 1 {Salmonella typhi	97.01
d1qp8a1	181	Putative formate dehydrogenase {Archaeon Pyrobacul	96.95
d1f06a1	170	Diaminopimelic acid dehydrogenase (DAPDH) {Coryneb	96.94
d1pgja2	178	6-phosphogluconate dehydrogenase {Trypanosoma bruc	96.85
d1dlja2	196	UDP-glucose dehydrogenase (UDPGDH) {Streptococcus	96.81
d1wdka3	186	Fatty oxidation complex alpha subunit, middle doma	96.8
d1p77a1	171	Shikimate 5-dehydrogenase AroE {Haemophilus influe	96.76
d1npya1	167	Shikimate 5-dehydrogenase-like protein HI0607 {Hae	96.75
d1j4aa1	197	D-lactate dehydrogenase {Lactobacillus helveticus	96.72
d1vj0a2	182	Hypothetical protein TM0436 {Thermotoga maritima [	96.72
d1e3ja2	170	Ketose reductase (sorbitol dehydrogenase) {Silverl	96.71
d1jvba2	170	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	96.71
d1j6ua1	89	UDP-N-acetylmuramate-alanine ligase MurC {Thermoto	96.63
d1pl8a2	171	Ketose reductase (sorbitol dehydrogenase) {Human (	96.6
d1mx3a1	193	Transcription corepressor CtbP {Human (Homo sapien	96.59
d1yl7a1	135	Dihydrodipicolinate reductase {Mycobacterium tuber	96.58
d1jqba2	174	Bacterial secondary alcohol dehydrogenase {Clostri	96.55
d1vi2a1	182	Putative shikimate dehydrogenase YdiB {Escherichia	96.51
d2csua1	129	Acetate-CoA ligase alpha chain, AcdA, N-terminal d	96.48
d1p3da1	96	UDP-N-acetylmuramate-alanine ligase MurC {Haemophi	96.38
d1llua2	166	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	96.31
d1y81a1	116	Hypothetical protein PF0725 {Pyrococcus furiosus [	96.31
d1dxya1	199	D-2-hydroxyisocaproate dehydrogenase {Lactobacillu	96.26
d2d59a1	139	Hypothetical protein PH1109 {Pyrococcus horikoshii	96.24
d1sc6a1	188	Phosphoglycerate dehydrogenase {Escherichia coli [	96.24
d2naca1	188	Formate dehydrogenase {Pseudomonas sp., strain 101	96.17
d1a9xa3	127	Carbamoyl phosphate synthetase (CPS), large subuni	96.15
d1d1ta2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	96.14
d2czca2	172	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	96.13
d1li4a1	163	S-adenosylhomocystein hydrolase {Human (Homo sapie	96.11
d1pjca1	168	L-alanine dehydrogenase {Phormidium lapideum [TaxI	96.1
d1vj1a2	187	Putative zinc-binding alcohol dehydrogenase {Mouse	96.04
d1d7ya2	121	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	95.97
d1id1a_	153	Rck domain from putative potassium channel Kch {Es	95.97
d1ebda2	117	Dihydrolipoamide dehydrogenase {Bacillus stearothe	95.96
d1gdha1	191	D-glycerate dehydrogenase {Hyphomicrobium methylov	95.92
d1v59a2	122	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	95.84
d1onfa2	117	Glutathione reductase {Plasmodium falciparum [TaxI	95.84
d1f8fa2	174	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	95.84
d2jhfa2	176	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	95.83
d2dt5a2	126	Transcriptional repressor Rex, C-terminal domain {	95.82
d1obba1	171	Alpha-glucosidase AglA {Thermotoga maritima [TaxId	95.81
d1nvta1	177	Shikimate 5-dehydrogenase AroE {Archaeon Methanoco	95.8
d1gesa2	116	Glutathione reductase {Escherichia coli [TaxId: 56	95.79
d1p0fa2	174	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	95.73
d3lada2	119	Dihydrolipoamide dehydrogenase {Azotobacter vinela	95.72
d1nvmb1	157	Acetaldehyde dehydrogenase (acylating) {Pseudomona	95.71
d1nhpa2	123	NADH peroxidase {Enterococcus faecalis [TaxId: 135	95.67
d1c0pa1	268	D-aminoacid oxidase, N-terminal domain {Rhodotorul	95.64
d1c1da1	201	Phenylalanine dehydrogenase {Rhodococcus sp., M4 [	95.61
d1ygya1	184	Phosphoglycerate dehydrogenase {Mycobacterium tube	95.56
d1j5pa4	132	Hypothetical protein TM1643 {Thermotoga maritima [	95.53
d1e3ia2	174	Alcohol dehydrogenase {Mouse (Mus musculus), class	95.53
d1edza1	171	Methylenetetrahydrofolate dehydrogenase/cyclohydro	95.52
d3grsa2	125	Glutathione reductase {Human (Homo sapiens) [TaxId	95.51
d3etja2	78	N5-carboxyaminoimidazole ribonucleotide synthetase	95.51
d1lvla2	115	Dihydrolipoamide dehydrogenase {Pseudomonas putida	95.43
d1q1ra2	133	Putidaredoxin reductase {Pseudomonas putida [TaxId	95.4
d2i76a2	153	Hypothetical protein TM1727 {Thermotoga maritima [	95.37
d1a9xa4	121	Carbamoyl phosphate synthetase (CPS), large subuni	95.33
d1xhca2	122	NADH oxidase /nitrite reductase {Pyrococcus furios	95.29
d1h6va2	122	Mammalian thioredoxin reductase {Rat (Rattus norve	95.25
d1b0aa1	166	Methylenetetrahydrofolate dehydrogenase/cyclohydro	95.19
d1leha1	230	Leucine dehydrogenase {Bacillus sphaericus [TaxId:	95.12
d1rjwa2	168	Alcohol dehydrogenase {Bacillus stearothermophilus	95.04
d1s6ya1	169	6-phospho-beta-glucosidase {Bacillus stearothermop	94.99
d2voua1	265	Dihydroxypyridine hydroxylase DhpH {Arthrobacter n	94.96
d1a4ia1	170	Methylenetetrahydrofolate dehydrogenase/cyclohydro	94.95
d2fzwa2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	94.86
d1b7go1	178	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	94.86
d1ps9a3	179	2,4-dienoyl-CoA reductase, middle domain {Escheric	94.8
d2bi7a1	314	UDP-galactopyranose mutase, N-terminal domain {Kle	94.74
d1h2ba2	172	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	94.71
d2gv8a2	107	Flavin-dependent monoxygenase SPBP16F5.08c {Schizo	94.7
d1ojta2	125	Dihydrolipoamide dehydrogenase {Neisseria meningit	94.69
d1dxla2	123	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	94.68
d1l7da1	183	Nicotinamide nucleotide transhydrogenase dI compon	94.48
d1u8xx1	167	Maltose-6'-phosphate glucosidase GlvA {Bacillus su	94.46
d1jw9b_	247	Molybdenum cofactor biosynthesis protein MoeB {Esc	94.4
d1kola2	195	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	94.35
d1mo9a2	121	NADH-dependent 2-ketopropyl coenzyme M oxidoreduct	94.25
d2ivda1	347	Protoporphyrinogen oxidase {Myxococcus xanthus [Ta	94.24
d1cdoa2	175	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	94.18
d1v8ba1	163	S-adenosylhomocystein hydrolase {Plasmodium falcip	94.16
d1gtea4	196	Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su	94.09
d1q0qa2	151	1-deoxy-D-xylulose-5-phosphate reductoisomerase {E	93.92
d1cf2o1	171	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	93.91
d1r0ka2	150	1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z	93.76
d2cvza2	156	Hydroxyisobutyrate dehydrogenase {Thermus thermoph	93.63
d1vkza2	90	Glycinamide ribonucleotide synthetase (GAR-syn), N	93.62
d1tlta1	164	Virulence factor MviM {Escherichia coli [TaxId: 56	93.54
d2iida1	370	L-aminoacid oxidase {Malayan pit viper (Calloselas	93.47
d2fy8a1	129	Potassium channel-related protein MthK {Archaeon M	93.41
d1djqa3	233	Trimethylamine dehydrogenase, middle domain {Methy	93.15
d1gsoa2	105	Glycinamide ribonucleotide synthetase (GAR-syn), N	93.06
d1iuka_	136	Hypothetical protein TT1466 {Thermus thermophilus	93.03
d1seza1	373	Protoporphyrinogen oxidase {Tobacco (Nicotiana tab	92.99
d1ryia1	276	Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}	92.96
d1hwxa1	293	Glutamate dehydrogenase {Cow (Bos taurus) [TaxId:	92.9
d1w5fa1	194	Cell-division protein FtsZ {Thermotoga maritima [T	92.88
d2gv8a1	335	Flavin-dependent monoxygenase SPBP16F5.08c {Schizo	92.84
d1fcda1	186	Flavocytochrome c sulfide dehydrogenase, FCSD, fla	92.79
d1up7a1	162	6-phospho-beta-glucosidase {Thermotoga maritima [T	92.68
d1nhpa1	198	NADH peroxidase {Enterococcus faecalis [TaxId: 135	92.67
d2vapa1	209	Cell-division protein FtsZ {Archaeon Methanococcus	92.51
d1k0ia1	292	p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas a	92.42
d1kyqa1	150	Bifunctional dehydrogenase/ferrochelatase Met8p, N	92.3
d1djqa2	156	Trimethylamine dehydrogenase, C-terminal domain {M	92.21
d1yovb1	426	UBA3 {Human (Homo sapiens) [TaxId: 9606]}	92.18
d1ydwa1	184	Probable oxidoreductase At4g09670 {Thale cress (Ar	92.13
d3c96a1	288	Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId:	92.01
d1i8ta1	298	UDP-galactopyranose mutase, N-terminal domain {Esc	91.99
d1vjta1	193	Putative alpha-glucosidase TM0752 {Thermotoga mari	91.84
d1lc0a1	172	Biliverdin reductase {Rat (Rattus norvegicus) [Tax	91.69
d1kifa1	246	D-aminoacid oxidase, N-terminal domain {Pig (Sus s	91.65
d1xeaa1	167	Putative oxidoreductase VCA1048 {Vibrio cholerae [	91.44
d1q1ra1	185	Putidaredoxin reductase {Pseudomonas putida [TaxId	91.26
d2bcgg1	297	Guanine nucleotide dissociation inhibitor, GDI {Ba	91.2
d2bw0a2	203	10-formyltetrahydrofolate dehydrogenase domain 1 {	90.99
d1h6da1	221	Glucose-fructose oxidoreductase, N-terminal domain	90.9
d1fmta2	206	Methionyl-tRNAfmet formyltransferase {Escherichia	90.81
d1aoga2	117	Trypanothione reductase {Trypanosoma cruzi [TaxId:	90.8
d1p9oa_	290	Phosphopantothenoylcysteine synthetase {Human (Hom	90.7
d1gtma1	239	Glutamate dehydrogenase {Archaeon Pyrococcus furio	90.3
d1d7ya1	183	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	90.23
d2dw4a2	449	Lysine-specific histone demethylase 1, LSD1 {Human	90.1
d1pj5a2	305	N,N-dimethylglycine oxidase {Arthrobacter globifor	90.09
d1feca2	117	Trypanothione reductase {Crithidia fasciculata [Ta	90.02
d2gf3a1	281	Sarcosine oxidase {Bacillus sp., strain b0618 [Tax	89.96
d1gu7a2	189	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	89.81
d2blna2	203	Polymyxin resistance protein ArnA, N-terminal doma	89.44
d1yova1	529	Amyloid beta precursor protein-binding protein 1,	89.19
d1xhca1	167	NADH oxidase /nitrite reductase {Pyrococcus furios	89.14
d1v9la1	242	Glutamate dehydrogenase {Pyrobaculum islandicum [T	88.66
d1zh8a1	181	Hypothetical protein TM0312 {Thermotoga maritima [	88.38
d1b26a1	234	Glutamate dehydrogenase {Thermotoga maritima [TaxI	88.32
d1ofua1	198	Cell-division protein FtsZ {Pseudomonas aeruginosa	88.04
d2bisa1	437	Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI	87.89
d1x7da_	340	Ornithine cyclodeaminase {Pseudomonas putida [TaxI	87.79
d1b5qa1	347	Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}	87.66
d1m6ia2	137	Apoptosis-inducing factor (AIF) {Human (Homo sapie	87.53
d1d5ta1	336	Guanine nucleotide dissociation inhibitor, GDI {Co	87.37
d1np3a2	182	Class I ketol-acid reductoisomerase (KARI) {Pseudo	87.17
d1w4xa1	298	Phenylacetone monooxygenase {Thermobifida fusca [T	86.74
d2nu7a1	119	Succinyl-CoA synthetase, alpha-chain, N-terminal (	86.71
d1bgva1	255	Glutamate dehydrogenase {Clostridium symbiosum [Ta	86.55
d2v5za1	383	Monoamine oxidase B {Human (Homo sapiens) [TaxId:	85.92
d1n4wa1	367	Cholesterol oxidase of GMC family {Streptomyces sp	85.88
d2nvwa1	237	Galactose/lactose metabolism regulatory protein GA	84.57
d1euca1	130	Succinyl-CoA synthetase, alpha-chain, N-terminal (	84.54
d1gado1	166	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	83.69
d1oi7a1	121	Succinyl-CoA synthetase, alpha-chain, N-terminal (	83.25
d1cjca2	230	Adrenodoxin reductase of mitochondrial p450 system	83.13
d1gtea3	153	Dihydropyrimidine dehydrogenase, domain 3 {Pig (Su	82.48
d1f0ka_	351	Peptidoglycan biosynthesis glycosyltransferase Mur	81.86
d2i0za1	251	Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]	81.61
d1omoa_	320	Archaeal alanine dehydrogenase {Archaeon Archaeogl	81.44
d1rq2a1	198	Cell-division protein FtsZ {Mycobacterium tubercul	80.68
d2g82a1	168	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	80.58
d1sbza_	186	Probable aromatic acid decarboxylase Pad1 {Escheri	80.09

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.1e-43  Score=308.34  Aligned_cols=286  Identities=18%  Similarity=0.206  Sum_probs=222.8

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccC-CCCCCccCCCeeecCCcchhhhcCCCcEEEECCCCCC
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIF-PGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTPI  128 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~~~  128 (355)
                      ++||||||||||||++|+++|+++||+|++++|......... ...   ....+|+.+.+.++.++.++|+|||+|+...
T Consensus         1 kKKIlVtG~sGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~---~~~~~d~~~~~~~~~~~~~~d~VihlAa~~~   77 (312)
T d2b69a1           1 RKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWI---GHENFELINHDVVEPLYIEVDQIYHLASPAS   77 (312)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTGGGT---TCTTEEEEECCTTSCCCCCCSEEEECCSCCS
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCCcCCHHHHHHhc---CCCceEEEehHHHHHHHcCCCEEEECcccCC
Confidence            379999999999999999999999999999998544322221 111   1556899999999888889999999999753


Q ss_pred             CCCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCCCCccccCCC-----C--CCChh-HHHHHH
Q 018503          129 GTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESS-----P--SGNDY-LAEVCR  200 (355)
Q Consensus       129 ~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~-----~--~~~~y-~~k~~~  200 (355)
                      ... ...++...+++|+.++.+|++++++  .++ ++||+||+++  ||.....+.+|+.     +  |...| .+|...
T Consensus        78 ~~~-~~~~~~~~~~~Nv~g~~~ll~~~~~--~~~-k~I~~SS~~v--y~~~~~~~~~e~~~~~~~~~~p~~~Y~~sK~~~  151 (312)
T d2b69a1          78 PPN-YMYNPIKTLKTNTIGTLNMLGLAKR--VGA-RLLLASTSEV--YGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVA  151 (312)
T ss_dssp             HHH-HTTCHHHHHHHHHHHHHHHHHHHHH--HTC-EEEEEEEGGG--GBSCSSSSBCTTCCCBCCSSSTTHHHHHHHHHH
T ss_pred             chh-HHhCHHHHHHHHHHHHHHHHHHHHH--cCC-cEEEEEChhe--ecCCCCCCCCccccCCCCCCCCccHHHHHHHHH
Confidence            221 2345678889999999999999999  565 7999999999  9877666666643     2  33457 888888


Q ss_pred             HHHHHHhccCCCCeEEEEEecEEEeCCCCc-ccchHHHH--HHHhCCCC---CCCCcceecccHHHHHHHHHHHHhCCCC
Q 018503          201 EWEGTALKVNKDVRLALIRIGIVLGKDGGA-LAKMIPLF--MMFAGGPL---GSGQQWFSWIHLDDIVNLIYEALSNPSY  274 (355)
Q Consensus       201 ~~~~~~~~~~~~~~~~i~Rp~~i~G~~~~~-~~~~~~~~--~~~~~~~~---~~~~~~~~~i~v~Dva~~~~~~~~~~~~  274 (355)
                      |.+...+...++++++++||+++|||+... ...+++.+  +...++++   +++.+.++|+|++|+|++++.+++.. .
T Consensus       152 E~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~~~i~~~i~~~~~g~~i~i~~~g~~~r~~i~v~D~~~~~~~~~~~~-~  230 (312)
T d2b69a1         152 ETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSN-V  230 (312)
T ss_dssp             HHHHHHHHHHHCCCEEEEEECCEECTTCCTTCCCHHHHHHHHHHHTCCEEEESSSCCEEECEEHHHHHHHHHHHHTSS-C
T ss_pred             HHHHHHHHHHhCCcEEEEEeeeEECCCCCCCCccHHHHHHHHHHcCCCeEEeCCCCeeEccEEHHHHHHHHHHHHhhc-c
Confidence            888888887789999999999999997533 23455444  55677764   78899999999999999999998765 5


Q ss_pred             CCceEecCCCccCHHHHHHHHHHHhCCCCCCCCcHHHHHHHhcccceeeecCccccchhHH-hCCCCCCccCHHHHHHHH
Q 018503          275 RGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAK-ELGFPFKYRYVKDALKAI  353 (355)
Q Consensus       275 ~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~-~lG~~p~~~~~~~~l~~~  353 (355)
                      .+.||+++++++++.|+++.+++.+|.+..+.....    ..++.     .....+++|++ .+||+|+++ ++++|+++
T Consensus       231 ~~~~n~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~----~~~~~-----~~~~~d~~k~~~~lgw~p~~~-l~~~I~~~  300 (312)
T d2b69a1         231 SSPVNLGNPEEHTILEFAQLIKNLVGSGSEIQFLSE----AQDDP-----QKRKPDIKKAKLMLGWEPVVP-LEEGLNKA  300 (312)
T ss_dssp             CSCEEESCCCEEEHHHHHHHHHHHHTCCCCEEEECC----CTTCC-----CCCCBCCHHHHHHHCCCCCSC-HHHHHHHH
T ss_pred             CCceEecCCcccchhhHHHHHHHHhCCCCceEECCC----CCCCC-----CeeeECHHHHHHHHCCCCCCC-HHHHHHHH
Confidence            789999999999999999999999998743322111    01121     23455778885 589999996 99999998


Q ss_pred             hC
Q 018503          354 MS  355 (355)
Q Consensus       354 ~~  355 (355)
                      ++
T Consensus       301 i~  302 (312)
T d2b69a1         301 IH  302 (312)
T ss_dssp             HH
T ss_pred             HH
Confidence            63

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=2e-42  Score=310.66  Aligned_cols=300  Identities=16%  Similarity=0.140  Sum_probs=218.3

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchh-----hccCCC----CCCccCCCeeecCCcchhhhcC--CCcE
Q 018503           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKA-----ELIFPG----KKTRFFPGVMIAEEPQWRDCIQ--GSTA  119 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-----~~~~~~----~~~~~~~~~d~~~~~~~~~~~~--~~d~  119 (355)
                      |+|||||||||||++|+++|++.||+|++++|..+..     ..+...    .....+..+|+.|.+++.++++  ++|+
T Consensus         2 K~vLITGatGfiGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~   81 (357)
T d1db3a_           2 KVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREVQPDE   81 (357)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHHCCSE
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHHhhhhhcCCCeEEEEeecCCHHHHHHHHhccCCCE
Confidence            6899999999999999999999999999999965321     111110    0001134578889999999997  5699


Q ss_pred             EEECCCCCCCCCCChhhHHHHHHHhhhhHHHHHHHHHcCC-CCCCcEEEEeeeeeeeeCCCCCccccCCCCC--CChh-H
Q 018503          120 VVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESP-EGVRPSVLVSATALGYYGTSETEVFDESSPS--GNDY-L  195 (355)
Q Consensus       120 vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~--~~~y-~  195 (355)
                      |||+|+..+. ..+..++...+++|+.++.+|+++|++.. .+.++|||+||+++  ||.....+++|+++.  .+.| .
T Consensus        82 v~h~aa~~~~-~~~~~~~~~~~~~Nv~gt~nllea~~~~~~~~~~r~i~~SS~~v--YG~~~~~~~~E~~~~~P~~~Y~~  158 (357)
T d1db3a_          82 VYNLGAMSHV-AVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSEL--YGLVQEIPQKETTPFYPRSPYAV  158 (357)
T ss_dssp             EEECCCCCTT-TTTTSCHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGG--GTTCCSSSBCTTSCCCCCSHHHH
T ss_pred             EEEeeccccc-chhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEEEchhh--hCCCCCCCcCCCCCCCCCChHHH
Confidence            9999997533 33456678889999999999999998831 23446999999999  998778889998875  4568 8


Q ss_pred             HHHHHHHHHHHhccCCCCeEEEEEecEEEeCCCCcc---cchHHHH-HHHhCCC----CCCCCcceecccHHHHHHHHHH
Q 018503          196 AEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGAL---AKMIPLF-MMFAGGP----LGSGQQWFSWIHLDDIVNLIYE  267 (355)
Q Consensus       196 ~k~~~~~~~~~~~~~~~~~~~i~Rp~~i~G~~~~~~---~~~~~~~-~~~~~~~----~~~~~~~~~~i~v~Dva~~~~~  267 (355)
                      +|...|.+...+...++++++++||+++|||+.+..   ..+...+ ....+..    ++++++.++++|++|+|+++..
T Consensus       159 sK~~~E~~~~~~~~~~~l~~~ilR~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~~~~~r~~~~v~D~~~a~~~  238 (357)
T d1db3a_         159 AKLYAYWITVNYRESYGMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYVKMQWM  238 (357)
T ss_dssp             HHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCCCEEESCTTCEECCEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhCCCEEEEEeccccCCCCCcCCCchHHHHHHHHHHhCCCceEEECCCCeeecceeechHHHHHHH
Confidence            899899888888887899999999999999965322   1222222 3334433    2788999999999999999999


Q ss_pred             HHhCCCCCCceEecCCCccCHHHHHHHHHHHhCCCCCC-CCcHHHHHHH---hc------cc-cee-----------eec
Q 018503          268 ALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWL-PVPEFALKAV---LG------EG-AFV-----------VLE  325 (355)
Q Consensus       268 ~~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~-~~~~~~~~~~---~~------~~-~~~-----------~~~  325 (355)
                      +++.+ .++.||+++++++|+.|+++.+.+.+|....+ ..+.......   ..      .. ...           ...
T Consensus       239 ~~~~~-~~~~yni~sg~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~  317 (357)
T d1db3a_         239 MLQQE-QPEDFVIATGVQYSVRQFVEMAAAQLGIKLRFEGTGVEEKGIVVSVTGHDAPGVKPGDVIIAVDPRYFRPAEVE  317 (357)
T ss_dssp             TTSSS-SCCCEEECCCCCEEHHHHHHHHHHTTTEEEEEESCGGGCEEEEEEECSSSCTTCCTTCEEEEECGGGCCCCC-C
T ss_pred             HHhCC-CCCeEEECCCCceehHHHHHHHHHHhCCccccccccccccchhhhhhcccccccccCceeEeeccccCCCcccc
Confidence            99876 47899999999999999999999999864221 1111100000   00      00 000           012


Q ss_pred             CccccchhHHh-CCCCCCccCHHHHHHHHhC
Q 018503          326 GQRVVPARAKE-LGFPFKYRYVKDALKAIMS  355 (355)
Q Consensus       326 ~~~~~~~k~~~-lG~~p~~~~~~~~l~~~~~  355 (355)
                      ...++++|+++ |||+|+++ ++|+|+++++
T Consensus       318 ~~~~d~skakk~LGw~P~~s-l~egI~~~I~  347 (357)
T d1db3a_         318 TLLGDPTKAHEKLGWKPEIT-LREMVSEMVA  347 (357)
T ss_dssp             CCCBCCHHHHHHHCCCCCSC-HHHHHHHHHH
T ss_pred             ccccCHHHHHHHHCCCcCCC-HHHHHHHHHH
Confidence            23457889965 89999996 9999999873

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

Probab=100.00  E-value=2.8e-42  Score=305.64  Aligned_cols=289  Identities=22%  Similarity=0.244  Sum_probs=219.1

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhCCCeE------EEEecCCchhh--ccC--CCCCCccCCCeeecCCcchhhhcCCCcEE
Q 018503           51 MTVSVTGATGFIGRRLVQRLQADNHQV------RVLTRSRSKAE--LIF--PGKKTRFFPGVMIAEEPQWRDCIQGSTAV  120 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~g~~V------~~~~r~~~~~~--~~~--~~~~~~~~~~~d~~~~~~~~~~~~~~d~v  120 (355)
                      |||||||||||||++|++.|+++||+|      +.+++......  .+.  .......+...|..+.........++|+|
T Consensus         1 MkIlItG~tGfIG~~l~~~L~~~g~~v~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~v   80 (322)
T d1r6da_           1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVHGDIRDAGLLARELRGVDAI   80 (322)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGGGGTTCTTEEEEECCTTCHHHHHHHTTTCCEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCCccCCceEEEEeCCCccccHhHhhhhhcCCCeEEEEeccccchhhhccccccceE
Confidence            799999999999999999999999854      44443321111  111  11000012234555666777777899999


Q ss_pred             EECCCCCCCCCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCCCCccccCCCCCC--Chh-HHH
Q 018503          121 VNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSG--NDY-LAE  197 (355)
Q Consensus       121 i~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~--~~y-~~k  197 (355)
                      +|+|+.... ......+...+++|+.++.+++++|.+  .+++++||+||+++  ||.....+++|+++..  ..| .+|
T Consensus        81 i~~a~~~~~-~~~~~~~~~~~~~N~~gt~~ll~~~~~--~~~~~~I~~Ss~~~--yg~~~~~~~~E~~~~~p~~~Y~~sK  155 (322)
T d1r6da_          81 VHFAAESHV-DRSIAGASVFTETNVQGTQTLLQCAVD--AGVGRVVHVSTNQV--YGSIDSGSWTESSPLEPNSPYAASK  155 (322)
T ss_dssp             EECCSCCCH-HHHHHCCHHHHHHHTHHHHHHHHHHHH--TTCCEEEEEEEGGG--GCCCSSSCBCTTSCCCCCSHHHHHH
T ss_pred             Eeecccccc-cccccchHHHhhhhHHHHHHHHHHHHH--cCCceEEEeeccee--ecCCCCCCCCCCCCCCCCCHHHHHH
Confidence            999986422 223344567788999999999999999  78899999999999  9988888899988754  468 888


Q ss_pred             HHHHHHHHHhccCCCCeEEEEEecEEEeCCCCcccchHHHH--HHHhCCCC---CCCCcceecccHHHHHHHHHHHHhCC
Q 018503          198 VCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLF--MMFAGGPL---GSGQQWFSWIHLDDIVNLIYEALSNP  272 (355)
Q Consensus       198 ~~~~~~~~~~~~~~~~~~~i~Rp~~i~G~~~~~~~~~~~~~--~~~~~~~~---~~~~~~~~~i~v~Dva~~~~~~~~~~  272 (355)
                      ...|.+...+..+++++++++||+++|||+.... .+++.+  +...++++   +++++.++|+|++|+|+++..+++++
T Consensus       156 ~~~E~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~-~~i~~~i~~~~~~~~i~v~~~g~~~r~~i~v~D~a~ai~~~~~~~  234 (322)
T d1r6da_         156 AGSDLVARAYHRTYGLDVRITRCCNNYGPYQHPE-KLIPLFVTNLLDGGTLPLYGDGANVREWVHTDDHCRGIALVLAGG  234 (322)
T ss_dssp             HHHHHHHHHHHHHHCCCEEEEEECEEECTTCCTT-SHHHHHHHHHHTTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHHhCCCEEEEEeeeEECcCCCcC-cHHHHHHHHHHcCCCcEEecCCCeEEccEEHHHHHHHHHHHHhCC
Confidence            8888888888888899999999999999976432 344444  45566664   78999999999999999999999998


Q ss_pred             CCCCceEecCCCccCHHHHHHHHHHHhCCCCC-CCCcHHHHHHHhcccceeeecCccccchhHH-hCCCCCCccCHHHHH
Q 018503          273 SYRGVINGTAPNPVRLAEMCDHLGNVLGRPSW-LPVPEFALKAVLGEGAFVVLEGQRVVPARAK-ELGFPFKYRYVKDAL  350 (355)
Q Consensus       273 ~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~-~lG~~p~~~~~~~~l  350 (355)
                      ..+++||+++++++++.|+++.+.+.+|.+.. +.....    ..++     .....++++|++ .|||+|+++ ++|+|
T Consensus       235 ~~~~~~ni~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~----~~~~-----~~~~~~d~~k~~~~lg~~p~~~-~eegI  304 (322)
T d1r6da_         235 RAGEIYHIGGGLELTNRELTGILLDSLGADWSSVRKVAD----RKGH-----DLRYSLDGGKIERELGYRPQVS-FADGL  304 (322)
T ss_dssp             CTTCEEEECCCCEEEHHHHHHHHHHHHTCCGGGEEEECC----CTTC-----CCBCCBCCHHHHHHHCCCCCSC-HHHHH
T ss_pred             CCCCeeEEeecccchhHHHHHHHHHHhCCCccceeecCC----CCCC-----CceeeeCHHHHHHHHCCCCCCC-HHHHH
Confidence            77789999999999999999999999997621 111100    0111     122346778886 599999996 99999


Q ss_pred             HHHhC
Q 018503          351 KAIMS  355 (355)
Q Consensus       351 ~~~~~  355 (355)
                      +++++
T Consensus       305 ~~~i~  309 (322)
T d1r6da_         305 ARTVR  309 (322)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            99874

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=1e-40  Score=300.57  Aligned_cols=290  Identities=17%  Similarity=0.190  Sum_probs=216.0

Q ss_pred             cCCCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcCCCcEEEECCCC
Q 018503           47 KASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT  126 (355)
Q Consensus        47 ~~~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~  126 (355)
                      |.+.|||||||||||||++|+++|+++||+|++++|............  ..+..+|+.+.+.+.++++++|+|||+|+.
T Consensus        12 ~~~nMKILVTGgsGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~--~~~~~~D~~~~~~~~~~~~~~d~Vih~a~~   89 (363)
T d2c5aa1          12 PSENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTEDMFC--DEFHLVDLRVMENCLKVTEGVDHVFNLAAD   89 (363)
T ss_dssp             TTSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCGGGTC--SEEEECCTTSHHHHHHHHTTCSEEEECCCC
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCCccchhhhccc--CcEEEeechhHHHHHHHhhcCCeEeecccc
Confidence            345699999999999999999999999999999988654432211110  013345666777888888899999999987


Q ss_pred             CCCCCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCCCCccccC-------CCC--CCChh-HH
Q 018503          127 PIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDE-------SSP--SGNDY-LA  196 (355)
Q Consensus       127 ~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e-------~~~--~~~~y-~~  196 (355)
                      ..........+......|+.++.++++++.+  .++++||++||..+  |+.....+.++       ..+  |...| .+
T Consensus        90 ~~~~~~~~~~~~~~~~~n~~gt~~ll~~~~~--~~vk~~i~~SS~~~--~~~~~~~~~~~~~~~~~e~~~~~p~~~Yg~s  165 (363)
T d2c5aa1          90 MGGMGFIQSNHSVIMYNNTMISFNMIEAARI--NGIKRFFYASSACI--YPEFKQLETTNVSLKESDAWPAEPQDAFGLE  165 (363)
T ss_dssp             CCCHHHHTTCHHHHHHHHHHHHHHHHHHHHH--TTCSEEEEEEEGGG--SCGGGSSSSSSCEECGGGGSSBCCSSHHHHH
T ss_pred             cccccccccccccccccccchhhHHHHhHHh--hCcccccccccccc--ccccccccccccccccccCCcCCCCCHHHHH
Confidence            5433323455677889999999999999999  79999999999998  88554433332       223  34568 88


Q ss_pred             HHHHHHHHHHhccCCCCeEEEEEecEEEeCCCCcc---cchH-HHH--HHHhCCC---CCCCCcceecccHHHHHHHHHH
Q 018503          197 EVCREWEGTALKVNKDVRLALIRIGIVLGKDGGAL---AKMI-PLF--MMFAGGP---LGSGQQWFSWIHLDDIVNLIYE  267 (355)
Q Consensus       197 k~~~~~~~~~~~~~~~~~~~i~Rp~~i~G~~~~~~---~~~~-~~~--~~~~~~~---~~~~~~~~~~i~v~Dva~~~~~  267 (355)
                      |...|.....+....+++++++||+++||+.....   .... ...  ......+   +++|.+.++|+|++|+++++..
T Consensus       166 K~~~E~~~~~~~~~~gl~~~ilR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~v~D~~~~~~~  245 (363)
T d2c5aa1         166 KLATEELCKHYNKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDECVEGVLR  245 (363)
T ss_dssp             HHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCCSSSCCCHHHHHHHHHHHCSSCEEEESCSCCEECCEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhCCCEEEEEeeeEeccCCcccccccccccccccccccccccccccCCCCeEEEEeehhHHHHHHHH
Confidence            88888888877777799999999999999875321   1111 111  2222222   2788899999999999999999


Q ss_pred             HHhCCCCCCceEecCCCccCHHHHHHHHHHHhCCCCCCC-CcHHHHHHHhcccceeeecCccccchhHHh-CCCCCCccC
Q 018503          268 ALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLP-VPEFALKAVLGEGAFVVLEGQRVVPARAKE-LGFPFKYRY  345 (355)
Q Consensus       268 ~~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~-lG~~p~~~~  345 (355)
                      +++.+ .+++||+++++++|+.|+++.+.+..|++..+. .+..      .+     .....++++|+++ |||+|+++ 
T Consensus       246 ~~~~~-~~~~~ni~~~~~~s~~~l~~~i~~~~g~~~~i~~~~~~------~~-----~~~~~~d~ska~~~LGw~p~~s-  312 (363)
T d2c5aa1         246 LTKSD-FREPVNIGSDEMVSMNEMAEMVLSFEEKKLPIHHIPGP------EG-----VRGRNSDNNLIKEKLGWAPNMR-  312 (363)
T ss_dssp             HHHSS-CCSCEEECCCCCEEHHHHHHHHHHTTTCCCCEEEECCC------CC-----CSBCEECCHHHHHHHSCCCCCC-
T ss_pred             HHhCC-CCCeEEEecCCcccHHHHHHHHHHHhCCCCceEeCCCC------CC-----ccccccCHHHHHHHhCCCCCCC-
Confidence            99876 478999999999999999999999999874332 1110      11     1223357788865 99999996 


Q ss_pred             HHHHHHHHhC
Q 018503          346 VKDALKAIMS  355 (355)
Q Consensus       346 ~~~~l~~~~~  355 (355)
                      ++|+|+++++
T Consensus       313 leegi~~ti~  322 (363)
T d2c5aa1         313 LKEGLRITYF  322 (363)
T ss_dssp             HHHHHHHHHH
T ss_pred             HHHHHHHHHH
Confidence            9999999873

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=100.00  E-value=3.4e-40  Score=294.55  Aligned_cols=297  Identities=17%  Similarity=0.149  Sum_probs=223.7

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhc-------cCCCCC--CccCCCeeecCCcchhhhcCCCc
Q 018503           48 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAEL-------IFPGKK--TRFFPGVMIAEEPQWRDCIQGST  118 (355)
Q Consensus        48 ~~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-------~~~~~~--~~~~~~~d~~~~~~~~~~~~~~d  118 (355)
                      .++|+|||||||||||++|+++|++.||+|++++|.......       ......  ...+...|..|...+.....+.+
T Consensus        14 ~~~k~iLVTG~tGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~~   93 (341)
T d1sb8a_          14 AQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACAGVD   93 (341)
T ss_dssp             HSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHTTCS
T ss_pred             CCCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHHhhhhcccCCeeEEeecccccccccccccccc
Confidence            345799999999999999999999999999999974432110       100000  00022346667777777778999


Q ss_pred             EEEECCCCCCCCCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCCCCccccCCCCCC--Chh-H
Q 018503          119 AVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSG--NDY-L  195 (355)
Q Consensus       119 ~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~--~~y-~  195 (355)
                      +|+|+++.... ..+..++...+++|+.++.+|+++|.+  .+++++||+||.++  ||...+.+.+|+++..  +.| .
T Consensus        94 ~v~~~~a~~~~-~~~~~~~~~~~~~Nv~gt~~ll~~~~~--~~~~~~i~~SS~~v--yg~~~~~~~~E~~~~~p~~~Y~~  168 (341)
T d1sb8a_          94 YVLHQAALGSV-PRSINDPITSNATNIDGFLNMLIAARD--AKVQSFTYAASSST--YGDHPGLPKVEDTIGKPLSPYAV  168 (341)
T ss_dssp             EEEECCSCCCH-HHHHHCHHHHHHHHTHHHHHHHHHHHH--TTCSEEEEEEEGGG--GTTCCCSSBCTTCCCCCCSHHHH
T ss_pred             ccccccccccc-cccccCccchhheeehhHHHHHHHHHh--cCCceEEEccccee--eCCCCCCCccCCCCCCCCCcchH
Confidence            99999986422 224566678899999999999999999  78899999999999  9988888899988754  567 8


Q ss_pred             HHHHHHHHHHHhccCCCCeEEEEEecEEEeCCCC---cccchHHHH--HHHhCCCC---CCCCcceecccHHHHHHHHHH
Q 018503          196 AEVCREWEGTALKVNKDVRLALIRIGIVLGKDGG---ALAKMIPLF--MMFAGGPL---GSGQQWFSWIHLDDIVNLIYE  267 (355)
Q Consensus       196 ~k~~~~~~~~~~~~~~~~~~~i~Rp~~i~G~~~~---~~~~~~~~~--~~~~~~~~---~~~~~~~~~i~v~Dva~~~~~  267 (355)
                      +|...|.+...+....+++++++||+++||++..   ....+++.+  ....++++   ++|.+.++|+|++|+|.++..
T Consensus       169 sK~~~E~~~~~~~~~~~i~~~ilR~~~v~G~~~~~~~~~~~~i~~~~~~~~~g~~i~~~g~g~~~r~~i~v~D~~~a~~~  248 (341)
T d1sb8a_         169 TKYVNELYADVFSRCYGFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETSRDFCYIENTVQANLL  248 (341)
T ss_dssp             HHHHHHHHHHHHHHHHCCCCEEEEECCEECTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECCEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhCCCeEEEEeceeeccCcCCCCchhhhHHHHHHHHHcCCceEEcCCCCEEEEEEEEeccchhhhh
Confidence            8888888888888777999999999999999753   223444433  55667765   789999999999999999999


Q ss_pred             HHhCCC--CCCceEecCCCccCHHHHHHHHHHHhCCCCC-CCCcHHHHHHHhcccceeeecCccccchhHHh-CCCCCCc
Q 018503          268 ALSNPS--YRGVINGTAPNPVRLAEMCDHLGNVLGRPSW-LPVPEFALKAVLGEGAFVVLEGQRVVPARAKE-LGFPFKY  343 (355)
Q Consensus       268 ~~~~~~--~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~-lG~~p~~  343 (355)
                      ++..+.  .+++||+++++.+|+.|+++.+.+.++.+.. +...........++     ......+++|+++ |||+|++
T Consensus       249 ~~~~~~~~~~~~~~~~~~~~~si~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~d~~k~~~~LGw~p~~  323 (341)
T d1sb8a_         249 AATAGLDARNQVYNIAVGGRTSLNQLFFALRDGLAENGVSYHREPVYRDFREGD-----VRHSLADISKAAKLLGYAPKY  323 (341)
T ss_dssp             HHTCCGGGCSEEEEESCSCCEEHHHHHHHHHHHHHHTTCCCCCCCEEECCCTTC-----CSBCCBCCHHHHHHTCCCCCC
T ss_pred             hhhccccccceeeeecccccchHHHHHHHHHHHhccccccccccccccCCCCCC-----cCeeeeCHHHHHHHHCCCcCC
Confidence            988654  4569999999999999999999999986521 11110000000111     1123457788865 9999999


Q ss_pred             cCHHHHHHHHhC
Q 018503          344 RYVKDALKAIMS  355 (355)
Q Consensus       344 ~~~~~~l~~~~~  355 (355)
                      + ++++|+++++
T Consensus       324 s-l~~gi~~ti~  334 (341)
T d1sb8a_         324 D-VSAGVALAMP  334 (341)
T ss_dssp             C-HHHHHHHHHH
T ss_pred             C-HHHHHHHHHH
Confidence            7 9999999874

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=100.00  E-value=2.4e-40  Score=297.26  Aligned_cols=298  Identities=15%  Similarity=0.157  Sum_probs=214.7

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhCCCeEEE-EecCCchh--hccCCCCC--CccCCCeeecCCcchhhhcC--CCcEEEEC
Q 018503           51 MTVSVTGATGFIGRRLVQRLQADNHQVRV-LTRSRSKA--ELIFPGKK--TRFFPGVMIAEEPQWRDCIQ--GSTAVVNL  123 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~g~~V~~-~~r~~~~~--~~~~~~~~--~~~~~~~d~~~~~~~~~~~~--~~d~vi~~  123 (355)
                      |||||||||||||++|+++|++.||+|++ +++.....  ..+.....  ...+...|+.|.+.+.++++  ++|+|||+
T Consensus         1 MkILItG~tGfIGs~l~~~L~~~g~~vv~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d~Vihl   80 (361)
T d1kewa_           1 MKILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADICDSAEITRIFEQYQPDAVMHL   80 (361)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCccccHHHHHhhhhcCCcEEEEccCCCHHHHHHHHHhCCCCEEEEC
Confidence            79999999999999999999999997554 54432221  11111100  00133468888888988886  68999999


Q ss_pred             CCCCCCCCCChhhHHHHHHHhhhhHHHHHHHHHcCC-------CCCCcEEEEeeeeeeeeCCCCCcccc----------C
Q 018503          124 AGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESP-------EGVRPSVLVSATALGYYGTSETEVFD----------E  186 (355)
Q Consensus       124 a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~-------~~~~~~v~~Ss~~~~~yg~~~~~~~~----------e  186 (355)
                      |+... ...+..++...+++|+.++.+++++|.+..       .++++|||+||+.+  ||.....+..          |
T Consensus        81 Aa~~~-~~~~~~~p~~~~~~N~~gt~nl~~~~~~~~~~~~~~~~~~~~~i~~SS~~v--yg~~~~~~~~~~~~~~~~~~e  157 (361)
T d1kewa_          81 AAESH-VDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEV--YGDLPHPDEVENSVTLPLFTE  157 (361)
T ss_dssp             CSCCC-HHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGG--GCCCCCGGGSCTTSCCCCBCT
T ss_pred             ccccc-hhhHHhCHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCceEEEEecccee--eCCCccCCccccccCCCCccc
Confidence            99742 233345667889999999999999997620       13458999999999  9865443322          2


Q ss_pred             CCC--CCChh-HHHHHHHHHHHHhccCCCCeEEEEEecEEEeCCCCcccchHHHH--HHHhCCCC---CCCCcceecccH
Q 018503          187 SSP--SGNDY-LAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLF--MMFAGGPL---GSGQQWFSWIHL  258 (355)
Q Consensus       187 ~~~--~~~~y-~~k~~~~~~~~~~~~~~~~~~~i~Rp~~i~G~~~~~~~~~~~~~--~~~~~~~~---~~~~~~~~~i~v  258 (355)
                      ..+  |...| .+|...|.+...+...++++++++||+++|||+.... .+++.+  ++..++++   ++|++.|+|+|+
T Consensus       158 ~~~~~p~s~Yg~sK~~~E~~~~~~~~~~~i~~~~lR~~~vyGp~~~~~-~~i~~~i~~~~~g~~~~v~g~g~~~r~~i~v  236 (361)
T d1kewa_         158 TTAYAPSSPYSASKASSDHLVRAWRRTYGLPTIVTNCSNNYGPYHFPE-KLIPLVILNALEGKPLPIYGKGDQIRDWLYV  236 (361)
T ss_dssp             TSCCCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTCCTT-SHHHHHHHHHHHTCCEEEETTSCCEEEEEEH
T ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCEEEEecCceECcCCCcC-cHHHHHHHHHHcCCCcEEeCCCCeEEeCEEH
Confidence            222  34558 8899999998888888899999999999999976432 344443  55677775   789999999999


Q ss_pred             HHHHHHHHHHHhCCCCCCceEecCCCccCHHHHHHHHHHHhCCCCCCCCcH-HHHHHHhcccceeeecCccccchhHH-h
Q 018503          259 DDIVNLIYEALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPE-FALKAVLGEGAFVVLEGQRVVPARAK-E  336 (355)
Q Consensus       259 ~Dva~~~~~~~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~k~~-~  336 (355)
                      +|+|+++..+++++..+++||+++++++++.|+++.+.+.++......... ..... ... .........++.+|++ +
T Consensus       237 ~D~a~ai~~~~~~~~~~~~~Ni~s~~~~s~~~~~~~i~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~d~~k~~~~  314 (361)
T d1kewa_         237 EDHARALHMVVTEGKAGETYNIGGHNEKKNLDVVFTICDLLDEIVPKATSYREQITY-VAD-RPGHDRRYAIDAGKISRE  314 (361)
T ss_dssp             HHHHHHHHHHHHHCCTTCEEEECCCCEEEHHHHHHHHHHHHHHHSCCSSCGGGGEEE-ECC-CTTCCCBCCBCCHHHHHH
T ss_pred             HHHHHHHHHHHhcCCCCCeEEECCCCCcchHHHHhHhhhhcccccccccCcccceee-cCC-CCCCCceeeeCHHHHHHH
Confidence            999999999999877778999999999999999999999886432111111 00000 000 0001123456778886 4


Q ss_pred             CCCCCCccCHHHHHHHHhC
Q 018503          337 LGFPFKYRYVKDALKAIMS  355 (355)
Q Consensus       337 lG~~p~~~~~~~~l~~~~~  355 (355)
                      |||+|+++ ++++|+++++
T Consensus       315 lgw~P~~~-l~e~i~~ti~  332 (361)
T d1kewa_         315 LGWKPLET-FESGIRKTVE  332 (361)
T ss_dssp             HCCCCSCC-HHHHHHHHHH
T ss_pred             HCCCCCCC-HHHHHHHHHH
Confidence            89999997 9999999874

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=100.00  E-value=1.1e-38  Score=285.33  Aligned_cols=289  Identities=16%  Similarity=0.154  Sum_probs=213.2

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCC--chh-----hccCCCCCCccCCCeeecCCcchhhhcCCCcEEEE
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSR--SKA-----ELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVN  122 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~--~~~-----~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~  122 (355)
                      +|||||||||||||++|+++|+++||+|.++.++.  ...     ......  ...+..+|+.|.+.+.+++.+.|.|+|
T Consensus         2 ~mkILVTGgtGfIGs~lv~~L~~~g~~v~v~~~d~~~~~~~~~~~~~~~~~--~i~~~~~Di~d~~~~~~~~~~~~~v~~   79 (346)
T d1oc2a_           2 FKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAILGD--RVELVVGDIADAELVDKLAAKADAIVH   79 (346)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGGCSS--SEEEEECCTTCHHHHHHHHTTCSEEEE
T ss_pred             cCEEEEeCCCcHHHHHHHHHHHHCCCCeEEEEEeCCCccccHHHHHHhhcC--CeEEEEccCCCHHHHHHHHhhhhhhhh
Confidence            48999999999999999999999998766555432  111     111110  001334788899999999999999999


Q ss_pred             CCCCCCCCCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCCC------------CccccCCCC-
Q 018503          123 LAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSE------------TEVFDESSP-  189 (355)
Q Consensus       123 ~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~------------~~~~~e~~~-  189 (355)
                      +|+.... .....++...+++|+.++.++++++..  .+ .++|++||+.+  ||...            ....+|.++ 
T Consensus        80 ~a~~~~~-~~~~~~~~~~~~~N~~g~~nll~~~~~--~~-~k~i~~ss~~v--yg~~~~~~~~~~~~~~~~~~~~e~~~~  153 (346)
T d1oc2a_          80 YAAESHN-DNSLNDPSPFIHTNFIGTYTLLEAARK--YD-IRFHHVSTDEV--YGDLPLREDLPGHGEGPGEKFTAETNY  153 (346)
T ss_dssp             CCSCCCH-HHHHHCCHHHHHHHTHHHHHHHHHHHH--HT-CEEEEEEEGGG--GCCBCCGGGSTTTTCSTTSSBCTTSCC
T ss_pred             hhhcccc-cchhhCcccceeeehHhHHhhhhhhcc--cc-ccccccccceE--ecccCccccccccccCcccccccCCCC
Confidence            9986422 223355678889999999999999988  44 57999999998  87421            123344444 


Q ss_pred             -CCChh-HHHHHHHHHHHHhccCCCCeEEEEEecEEEeCCCCcccchHHHH-HHHhCCCC---CCCCcceecccHHHHHH
Q 018503          190 -SGNDY-LAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLF-MMFAGGPL---GSGQQWFSWIHLDDIVN  263 (355)
Q Consensus       190 -~~~~y-~~k~~~~~~~~~~~~~~~~~~~i~Rp~~i~G~~~~~~~~~~~~~-~~~~~~~~---~~~~~~~~~i~v~Dva~  263 (355)
                       |.+.| .+|...|.....+....+++++++||+++|||.......+...+ ....+.++   +++++.++|+|++|+|+
T Consensus       154 ~p~s~Y~~sK~~~E~~~~~~~~~~~i~~~ilR~~~vyGp~~~~~~~~~~~i~~~~~~~~~~i~~~g~~~r~~i~v~D~a~  233 (346)
T d1oc2a_         154 NPSSPYSSTKAASDLIVKAWVRSFGVKATISNCSNNYGPYQHIEKFIPRQITNILAGIKPKLYGEGKNVRDWIHTNDHST  233 (346)
T ss_dssp             CCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEESTTCCTTSHHHHHHHHHHHTCCCEEETTSCCEEECEEHHHHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHcCCCEEEEeecceeCCCCCccchhHHHHHHHHcCCceeEeCCCCccccccchhhHHH
Confidence             34568 88888888888877778999999999999998753322233333 44455554   78999999999999999


Q ss_pred             HHHHHHhCCCCCCceEecCCCccCHHHHHHHHHHHhCCCC-CCCCcHHHHHHHhcccceeeecCccccchhHH-hCCCCC
Q 018503          264 LIYEALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPS-WLPVPEFALKAVLGEGAFVVLEGQRVVPARAK-ELGFPF  341 (355)
Q Consensus       264 ~~~~~~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~-~lG~~p  341 (355)
                      +++.++.++..++.||++++++.++.|+++.+.+.++++. .+.....    ..++.     ....++++|++ .|||+|
T Consensus       234 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~----~~~~~-----~~~~~d~~k~~~~LGw~P  304 (346)
T d1oc2a_         234 GVWAILTKGRMGETYLIGADGEKNNKEVLELILEKMGQPKDAYDHVTD----RAGHD-----LRYAIDASKLRDELGWTP  304 (346)
T ss_dssp             HHHHHHHHCCTTCEEEECCSCEEEHHHHHHHHHHHTTCCTTCSEEECC----CTTCC-----CBCCBCCHHHHHHHCCCC
T ss_pred             HHHHHHhhcccCccccccccccccchHHHHHHHHHhCCCCcceEECCC----CCCCC-----ceeeeCHHHHHHHHCCCC
Confidence            9999999888888999999999999999999999999762 2211110    01111     12235678885 599999


Q ss_pred             CccCHHHHHHHHhC
Q 018503          342 KYRYVKDALKAIMS  355 (355)
Q Consensus       342 ~~~~~~~~l~~~~~  355 (355)
                      ++++++++|+++++
T Consensus       305 ~~t~l~e~i~~ti~  318 (346)
T d1oc2a_         305 QFTDFSEGLEETIQ  318 (346)
T ss_dssp             SCCCHHHHHHHHHH
T ss_pred             cCCCHHHHHHHHHH
Confidence            98679999999873

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=2e-38  Score=282.65  Aligned_cols=287  Identities=18%  Similarity=0.214  Sum_probs=211.6

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhc-------c-CCCCCCccCCCeeecCCcchhhhcC--CCcEE
Q 018503           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAEL-------I-FPGKKTRFFPGVMIAEEPQWRDCIQ--GSTAV  120 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-------~-~~~~~~~~~~~~d~~~~~~~~~~~~--~~d~v  120 (355)
                      |||||||||||||++|++.|+++||+|++++|.......       . ....   .+..+|+.|.+.+.++++  ++|+|
T Consensus         1 MKiLItG~tGfIG~~l~~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~---~~~~~Dl~d~~~l~~~~~~~~~d~V   77 (338)
T d1udca_           1 MRVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHP---TFVEGDIRNEALMTEILHDHAIDTV   77 (338)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHHTSCC---EEEECCTTCHHHHHHHHHHTTCSEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHhhcCCCC---EEEEeecCCHHHHHHHHhccCCCEE
Confidence            789999999999999999999999999999874332211       1 1111   144579999999999987  79999


Q ss_pred             EECCCCCCCCCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCCCCccccCCCC---CCChh-HH
Q 018503          121 VNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSP---SGNDY-LA  196 (355)
Q Consensus       121 i~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~---~~~~y-~~  196 (355)
                      ||+|+.. ....+..++...+++|+.++.+++++|++  .+++++|++||.++  |+.....+..|..+   +...| .+
T Consensus        78 iHlAa~~-~~~~~~~~~~~~~~~Nv~gt~nlL~~~~~--~~v~~~i~~Ss~~v--y~~~~~~~~~e~~~~~~p~~~Y~~s  152 (338)
T d1udca_          78 IHFAGLK-AVGESVQKPLEYYDNNVNGTLRLISAMRA--ANVKNFIFSSSATV--YGDQPKIPYVESFPTGTPQSPYGKS  152 (338)
T ss_dssp             EECCSCC-CHHHHHHCHHHHHHHHHHHHHHHHHHHHH--HTCCEEEEEEEGGG--GCSCCSSSBCTTSCCCCCSSHHHHH
T ss_pred             EECCCcc-chhhHHhCHHHHHHhHHHHHHHHHHHHHH--hCCCEEEecCcceE--EccccccccccccccCCCcchHHHH
Confidence            9999964 22334456778999999999999999999  78999999999998  87666655555443   34567 77


Q ss_pred             HHHHHHHHHH-hccCCCCeEEEEEecEEEeCCCCc---------ccchHHHH-HHHh--CCCC---------CCCCccee
Q 018503          197 EVCREWEGTA-LKVNKDVRLALIRIGIVLGKDGGA---------LAKMIPLF-MMFA--GGPL---------GSGQQWFS  254 (355)
Q Consensus       197 k~~~~~~~~~-~~~~~~~~~~i~Rp~~i~G~~~~~---------~~~~~~~~-~~~~--~~~~---------~~~~~~~~  254 (355)
                      |...+..... .....+++++++||+++||+....         ...+++.+ ....  +.++         .++.+.+|
T Consensus       153 K~~~e~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~i~i~g~~~~~~~g~~~rd  232 (338)
T d1udca_         153 KLMVEQILTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRD  232 (338)
T ss_dssp             HHHHHHHHHHHHHHSTTCEEEEEEECEEECCCTTSSSCCCCCSSCCSHHHHHHHHHTTSSSCEEEECSCSSSTTSSCEEC
T ss_pred             HhhhhHHHHHHHhhccCCeEEEEeeccEEeccCCCCCCCCccccHHHHHHHHHHHHhcCCCCEEEeCCCcccCCCCceee
Confidence            8777776654 444468999999999999986421         12344444 2222  2221         35788899


Q ss_pred             cccHHHHHHHHHHHHhCC---CCCCceEecCCCccCHHHHHHHHHHHhCCCCCCCCcHHHHHHHhcccceeeecCccccc
Q 018503          255 WIHLDDIVNLIYEALSNP---SYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVP  331 (355)
Q Consensus       255 ~i~v~Dva~~~~~~~~~~---~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  331 (355)
                      |+|++|++.++..++...   ...++||+++++++|+.|+++.+.+.+|.+..+.....    ..++.     ....+++
T Consensus       233 ~i~v~D~~~~~~~~~~~~~~~~~~~i~Ni~~~~~~si~e~~~~i~~~~g~~~~~~~~~~----~~~~~-----~~~~~d~  303 (338)
T d1udca_         233 YIHVMDLADGHVVAMEKLANKPGVHIYNLGAGVGNSVLDVVNAFSKACGKPVNYHFAPR----REGDL-----PAYWADA  303 (338)
T ss_dssp             EEEHHHHHHHHHHHHHHHTTCCEEEEEEESCSSCEEHHHHHHHHHHHHTSCCCEEEECC----CTTCC-----SBCCBCC
T ss_pred             EEEEeehhhhccccccccccccCcceeeecCCCCCcHHHHHHHHHHHHCCCCceEECCC----CCCCC-----CEeeECH
Confidence            999999998887766532   23458999999999999999999999997633322111    01111     2234678


Q ss_pred             hhHHh-CCCCCCccCHHHHHHHHhC
Q 018503          332 ARAKE-LGFPFKYRYVKDALKAIMS  355 (355)
Q Consensus       332 ~k~~~-lG~~p~~~~~~~~l~~~~~  355 (355)
                      +|+++ |||+|+++ ++|+|+++++
T Consensus       304 ~k~~~~lgwkp~~~-l~egi~~ti~  327 (338)
T d1udca_         304 SKADRELNWRVTRT-LDEMAQDTWH  327 (338)
T ss_dssp             HHHHHHHCCCCCCC-HHHHHHHHHH
T ss_pred             HHHHHHHCCCcCCC-HHHHHHHHHH
Confidence            88875 99999996 9999999873

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=100.00  E-value=4.2e-38  Score=278.63  Aligned_cols=291  Identities=16%  Similarity=0.123  Sum_probs=214.4

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhc--cCCCCC--CccCCCeeecCCcchhhhcC--CCcEEEECC
Q 018503           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAEL--IFPGKK--TRFFPGVMIAEEPQWRDCIQ--GSTAVVNLA  124 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~--~~~~~~--~~~~~~~d~~~~~~~~~~~~--~~d~vi~~a  124 (355)
                      ++|||||||||||++|+++|+++||+|++++|..+....  +.....  ...+..+|+.|.+.+.+.+.  ..++++|+|
T Consensus         1 k~vLItG~tGfiG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~~~a   80 (321)
T d1rpna_           1 RSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMADACSVQRAVIKAQPQEVYNLA   80 (321)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHTTCGGGEEEEECCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcccHHHHHHhcccCCcEEEEccccChHHhhhhhcccccccccccc
Confidence            589999999999999999999999999999997643211  100000  00134578888888888775  567888888


Q ss_pred             CCCCCCCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCC-cEEEEeeeeeeeeCCCCCccccCCCCC--CChh-HHHHHH
Q 018503          125 GTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVR-PSVLVSATALGYYGTSETEVFDESSPS--GNDY-LAEVCR  200 (355)
Q Consensus       125 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~-~~v~~Ss~~~~~yg~~~~~~~~e~~~~--~~~y-~~k~~~  200 (355)
                      +.. .......++...+..|+.++.++++++++  .+.+ +|++.||..+  ||.....+.+|+++.  ...| .+|...
T Consensus        81 ~~~-~~~~~~~~~~~~~~~n~~g~~~~l~~~~~--~~~~~~~i~~Ss~~~--~~~~~~~~~~E~~~~~p~~~Y~~sK~~~  155 (321)
T d1rpna_          81 AQS-FVGASWNQPVTTGVVDGLGVTHLLEAIRQ--FSPETRFYQASTSEM--FGLIQAERQDENTPFYPRSPYGVAKLYG  155 (321)
T ss_dssp             SCC-CHHHHTTSHHHHHHHHTHHHHHHHHHHHH--HCTTSEEEEEEEGGG--GCSCSSSSBCTTSCCCCCSHHHHHHHHH
T ss_pred             ccc-cccccccchHHHHhhhhhchHHHHHHHHH--hCCCcccccccchhh--cCcccCCCCCCCCCccccChhHHHHHHH
Confidence            764 22233445678889999999999999988  4544 5666677666  887777788888774  4567 888888


Q ss_pred             HHHHHHhccCCCCeEEEEEecEEEeCCCCcc---cchHHHH-HHHhCC-C---CCCCCcceecccHHHHHHHHHHHHhCC
Q 018503          201 EWEGTALKVNKDVRLALIRIGIVLGKDGGAL---AKMIPLF-MMFAGG-P---LGSGQQWFSWIHLDDIVNLIYEALSNP  272 (355)
Q Consensus       201 ~~~~~~~~~~~~~~~~i~Rp~~i~G~~~~~~---~~~~~~~-~~~~~~-~---~~~~~~~~~~i~v~Dva~~~~~~~~~~  272 (355)
                      |.+...+....+++++++||+++|||..+..   ..+...+ +...+. +   ++++++.++|+|++|+|++++.+++++
T Consensus       156 E~~~~~~~~~~~~~~~~lr~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~i~~g~g~~~r~~i~v~D~~~~~~~~~~~~  235 (321)
T d1rpna_         156 HWITVNYRESFGLHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKRDWGFAGDYVEAMWLMLQQD  235 (321)
T ss_dssp             HHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEEECEEHHHHHHHHHHHHHSS
T ss_pred             HHHHHHHHhhcCCcEEEEEEecccCCCccccccHHHHHHHHHHHHhCCCCcEEECCCCeEEccEEeHHHHHHHHHHHhcC
Confidence            8888888877899999999999999964322   1222333 333333 2   278899999999999999999999987


Q ss_pred             CCCCceEecCCCccCHHHHHHHHHHHhCCCCC--CCCcHHHHHHHhcccceeeecCccccchhHHh-CCCCCCccCHHHH
Q 018503          273 SYRGVINGTAPNPVRLAEMCDHLGNVLGRPSW--LPVPEFALKAVLGEGAFVVLEGQRVVPARAKE-LGFPFKYRYVKDA  349 (355)
Q Consensus       273 ~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~-lG~~p~~~~~~~~  349 (355)
                      . .+.||+++++..|+.++++.+.+.+|.+..  ........+  .++.     .....+++|+++ |||+|+++ ++|+
T Consensus       236 ~-~~~~ni~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~r--p~~~-----~~~~~d~~k~~k~lG~~P~~~-l~e~  306 (321)
T d1rpna_         236 K-ADDYVVATGVTTTVRDMCQIAFEHVGLDYRDFLKIDPAFFR--PAEV-----DVLLGNPAKAQRVLGWKPRTS-LDEL  306 (321)
T ss_dssp             S-CCCEEECCSCEEEHHHHHHHHHHTTTCCGGGTEEECGGGCC--SSCC-----CBCCBCTHHHHHHHCCCCCSC-HHHH
T ss_pred             C-cCCceecccccceehhhhHHHHHHhCCCccceeecCCCCCC--CCcc-----CCccCCHHHHHHHHCCCcCCC-HHHH
Confidence            5 678999999999999999999999997621  122111110  1221     223446778865 89999996 9999


Q ss_pred             HHHHhC
Q 018503          350 LKAIMS  355 (355)
Q Consensus       350 l~~~~~  355 (355)
                      |+++++
T Consensus       307 i~~tv~  312 (321)
T d1rpna_         307 IRMMVE  312 (321)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            999874

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=7.1e-38  Score=276.42  Aligned_cols=276  Identities=13%  Similarity=0.168  Sum_probs=211.6

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcC--CCcEEEECCCCC
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ--GSTAVVNLAGTP  127 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--~~d~vi~~a~~~  127 (355)
                      ++||||||||||||++|+++|+++||.|+++++.                ..+|+.+.+.+.++++  ++|+|+|+|+..
T Consensus         2 kkkIlITG~tGfiG~~l~~~L~~~g~~vi~~~~~----------------~~~~~~~~~~~~~~~~~~~~d~v~~~a~~~   65 (315)
T d1e6ua_           2 KQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTR----------------DELNLLDSRAVHDFFASERIDQVYLAAAKV   65 (315)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCT----------------TTCCTTCHHHHHHHHHHHCCSEEEECCCCC
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCcCEEEEecCc----------------hhccccCHHHHHHHHhhcCCCEEEEcchhc
Confidence            4799999999999999999999999999876542                2368888888888875  689999999865


Q ss_pred             CCCCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCCCCccccCCCCC-------CChh-HHHHH
Q 018503          128 IGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPS-------GNDY-LAEVC  199 (355)
Q Consensus       128 ~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~-------~~~y-~~k~~  199 (355)
                      ...........++++.|+.++.+++++|.+  .++++|||+||+++  ||.....+++|+.+.       ...| .+|..
T Consensus        66 ~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~--~~v~~~i~~SS~~v--yg~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~  141 (315)
T d1e6ua_          66 GGIVANNTYPADFIYQNMMIESNIIHAAHQ--NDVNKLLFLGSSCI--YPKLAKQPMAESELLQGTLEPTNEPYAIAKIA  141 (315)
T ss_dssp             CCHHHHHHCHHHHHHHHHHHHHHHHHHHHH--TTCCEEEEECCGGG--SCTTCCSSBCGGGTTSSCCCGGGHHHHHHHHH
T ss_pred             cccccchhhHHHHHHHHHHHHHHHHHHHHH--cCCCEEEEECCceE--cCCCCCCCccCCccccCCCCCCCCHHHHHHHH
Confidence            333333455667888999999999999999  79999999999999  997777677765432       2348 88888


Q ss_pred             HHHHHHHhccCCCCeEEEEEecEEEeCCCCcc---cchHHH-------HHHHhCCCC---CCCCcceecccHHHHHHHHH
Q 018503          200 REWEGTALKVNKDVRLALIRIGIVLGKDGGAL---AKMIPL-------FMMFAGGPL---GSGQQWFSWIHLDDIVNLIY  266 (355)
Q Consensus       200 ~~~~~~~~~~~~~~~~~i~Rp~~i~G~~~~~~---~~~~~~-------~~~~~~~~~---~~~~~~~~~i~v~Dva~~~~  266 (355)
                      .|.....+..+.|++++++||+++|||+....   ..+...       .....+.++   +++.+.++++|++|+++++.
T Consensus       142 ~E~~~~~~~~~~gl~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~~~v~d~~~~~~  221 (315)
T d1e6ua_         142 GIKLCESYNRQYGRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSGTPMREFLHVDDMAAASI  221 (315)
T ss_dssp             HHHHHHHHHHHHCCEEEEEEECEEESTTCCCCTTCSSHHHHHHHHHHHHHHHTCSEEEEESCSCCEECEEEHHHHHHHHH
T ss_pred             HHHHHHHHHHHhCCCEEEEeeccEECCCCCCCccccccceeeeccchhhhhccCCceEEcCCCceEEEEEEeehhHHHHH
Confidence            88888888877899999999999999975321   111111       122334443   77888999999999999999


Q ss_pred             HHHhCCC---------CCCceEecCCCccCHHHHHHHHHHHhCCCCCCCCcHHHHHHHhcccceeeecCccccchhHHhC
Q 018503          267 EALSNPS---------YRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKEL  337 (355)
Q Consensus       267 ~~~~~~~---------~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~l  337 (355)
                      .++....         ..+.++++.+.+.++.++++.+.+.+|.+..+.....    ...+     .....++++|+++|
T Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~i~~~~~~~~~i~~~~~----~~~~-----~~~~~~d~sk~k~L  292 (315)
T d1e6ua_         222 HVMELAHEVWLENTQPMLSHINVGTGVDCTIRELAQTIAKVVGYKGRVVFDAS----KPDG-----TPRKLLDVTRLHQL  292 (315)
T ss_dssp             HHHHSCHHHHHHTSBTTBCCEEESCSCCEEHHHHHHHHHHHHTCCSEEEEETT----SCCC-----CSBCCBCCHHHHHT
T ss_pred             HhhhhccccccccccccccccccCCCcchHHHHHHHHHHHHhCCCcceEECCC----CCCC-----CceeccCHHHHHHc
Confidence            9986543         3458999999999999999999999998743321110    0111     11234678889999


Q ss_pred             CCCCCccCHHHHHHHHhC
Q 018503          338 GFPFKYRYVKDALKAIMS  355 (355)
Q Consensus       338 G~~p~~~~~~~~l~~~~~  355 (355)
                      ||+|+++ ++|+|+++++
T Consensus       293 g~~p~~~-l~e~i~~ti~  309 (315)
T d1e6ua_         293 GWYHEIS-LEAGLASTYQ  309 (315)
T ss_dssp             TCCCCCC-HHHHHHHHHH
T ss_pred             CCCCCCC-HHHHHHHHHH
Confidence            9999996 9999999873

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.7e-37  Score=277.63  Aligned_cols=300  Identities=15%  Similarity=0.113  Sum_probs=215.9

Q ss_pred             CEE-EEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhh-----ccCCCCC-----CccCCCeeecCCcchhhhcC--CC
Q 018503           51 MTV-SVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAE-----LIFPGKK-----TRFFPGVMIAEEPQWRDCIQ--GS  117 (355)
Q Consensus        51 ~~I-lVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-----~~~~~~~-----~~~~~~~d~~~~~~~~~~~~--~~  117 (355)
                      +|| ||||||||||++|+++|+++||+|++++|..+...     .+.....     ...+...|+.|.+.+.+++.  ++
T Consensus         1 kKI~LVTG~tGfIG~~l~~~Ll~~g~~V~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~   80 (347)
T d1t2aa_           1 RNVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEVKP   80 (347)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHHCC
T ss_pred             CCEEEEecCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHhhchhhhccCCcEEEEeecCCchhhHHHHhhccc
Confidence            478 99999999999999999999999999999654321     1111100     00133457888888888885  67


Q ss_pred             cEEEECCCCCCCCCCChhhHHHHHHHhhhhHHHHHHHHHcCC-CCCCcEEEEeeeeeeeeCCCCCccccCCCCCC--Chh
Q 018503          118 TAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESP-EGVRPSVLVSATALGYYGTSETEVFDESSPSG--NDY  194 (355)
Q Consensus       118 d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~--~~y  194 (355)
                      ++++|+++.. ........+..++++|+.++.+++++++++. .+.++|||+||+++  ||.....+++|+++..  +.|
T Consensus        81 ~~v~~~~a~~-~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~~~~~~i~~SS~~v--yg~~~~~~~~E~~~~~P~~~Y  157 (347)
T d1t2aa_          81 TEIYNLGAQS-HVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQASTSEL--YGKVQEIPQKETTPFYPRSPY  157 (347)
T ss_dssp             SEEEECCSCC-CHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGG--TCSCSSSSBCTTSCCCCCSHH
T ss_pred             ceeeeeeecc-ccchhhccchhhhhhHHHHHHHHHHHHHHcCCCCCcEEEEecchhe--ecCCCCCCCCCCCCCCCCCHH
Confidence            8999999864 2233345566778999999999999998841 23357999999999  9988888899988754  468


Q ss_pred             -HHHHHHHHHHHHhccCCCCeEEEEEecEEEeCCCCcc---cchHHHH-HH-HhCCCC---CCCCcceecccHHHHHHHH
Q 018503          195 -LAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGAL---AKMIPLF-MM-FAGGPL---GSGQQWFSWIHLDDIVNLI  265 (355)
Q Consensus       195 -~~k~~~~~~~~~~~~~~~~~~~i~Rp~~i~G~~~~~~---~~~~~~~-~~-~~~~~~---~~~~~~~~~i~v~Dva~~~  265 (355)
                       .+|...|.....+...++++++++||+++|||.....   ..+...+ .. ....++   +++++.++|+|++|+|+++
T Consensus       158 g~sK~~aE~~~~~~~~~~~~~~~ilr~~~vyGp~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~g~~~r~~i~v~D~~~a~  237 (347)
T d1t2aa_         158 GAAKLYAYWIVVNFREAYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWGHAKDYVEAM  237 (347)
T ss_dssp             HHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCSCEEESCTTCEECCEEHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhCCCEEEEEecceeCCCCCCCccccccceeeehhhcCCcceeecCCCcceeeeeEecHHHHHH
Confidence             8888888888877777799999999999999964322   1122222 22 223332   7889999999999999999


Q ss_pred             HHHHhCCCCCCceEecCCCccCHHHHHHHHHHHhCCCCCC-CCcHHHHHHHhcccc-eee----------ecCccccchh
Q 018503          266 YEALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWL-PVPEFALKAVLGEGA-FVV----------LEGQRVVPAR  333 (355)
Q Consensus       266 ~~~~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~-~~~~~~~~~~~~~~~-~~~----------~~~~~~~~~k  333 (355)
                      ..++++.. .+.|+++.+...++.+....+...+++.... ..+............ ...          .....++++|
T Consensus       238 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rp~~~~~~~~d~sk  316 (347)
T d1t2aa_         238 WLMLQNDE-PEDFVIATGEVHSVREFVEKSFLHIGKTIVWEGKNENEVGRCKETGKVHVTVDLKYYRPTEVDFLQGDCTK  316 (347)
T ss_dssp             HHHHHSSS-CCCEEECCSCCEEHHHHHHHHHHHTTCCEEEESCGGGCEEEETTTCCEEEEECGGGSCSSCCCBCCBCCHH
T ss_pred             HHHhhcCC-CccceeccccccccchhhhhhhhhhcceeeecccchhhhhhhhhcCCceeeecccCCCCCCcCEeeECHHH
Confidence            99999875 5688899989999999999999999986221 111111000000000 000          1123457889


Q ss_pred             HHh-CCCCCCccCHHHHHHHHhC
Q 018503          334 AKE-LGFPFKYRYVKDALKAIMS  355 (355)
Q Consensus       334 ~~~-lG~~p~~~~~~~~l~~~~~  355 (355)
                      +++ |||+|+++ ++|+|+++++
T Consensus       317 ak~~Lgw~P~~s-l~e~i~~~I~  338 (347)
T d1t2aa_         317 AKQKLNWKPRVA-FDELVREMVH  338 (347)
T ss_dssp             HHHHHCCCCCSC-HHHHHHHHHH
T ss_pred             HHHHHCCCcCCC-HHHHHHHHHH
Confidence            965 89999996 9999999873

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=6.2e-38  Score=279.96  Aligned_cols=296  Identities=18%  Similarity=0.244  Sum_probs=211.6

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhCC-CeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhh-hcCCCcEEEECCCCCC
Q 018503           51 MTVSVTGATGFIGRRLVQRLQADN-HQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRD-CIQGSTAVVNLAGTPI  128 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~-~~~~~d~vi~~a~~~~  128 (355)
                      |||||||||||||++|+++|+++| ++|+++++.......+..... ..+...|+.+.+.+.+ +.+++|+|||+|+...
T Consensus         1 MKILITG~tGfiG~~l~~~Ll~~g~~~V~~ld~~~~~~~~~~~~~~-~~~i~~Di~~~~~~~~~~~~~~d~Vih~a~~~~   79 (342)
T d2blla1           1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPH-FHFVEGDISIHSEWIEYHVKKCDVVLPLVAIAT   79 (342)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGTTCTT-EEEEECCTTTCSHHHHHHHHHCSEEEECBCCCC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcchhhhccCCC-eEEEECccCChHHHHHHHHhCCCcccccccccc
Confidence            799999999999999999999998 599999987665444433211 1134567777766554 6678999999999753


Q ss_pred             CCCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCCCCccccCCCC---------CCChh-HHHH
Q 018503          129 GTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSP---------SGNDY-LAEV  198 (355)
Q Consensus       129 ~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~---------~~~~y-~~k~  198 (355)
                      . .....++...+..|+.++.++++++.+  .+. +++|+||+.+  |+........|..+         +...| .+|.
T Consensus        80 ~-~~~~~~~~~~~~~nv~gt~~ll~~~~~--~~~-~~~~~ss~~~--~~~~~~~~~~~~~~~~~~~~~~~p~~~Y~~sK~  153 (342)
T d2blla1          80 P-IEYTRNPLRVFELDFEENLRIIRYCVK--YRK-RIIFPSTSEV--YGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQ  153 (342)
T ss_dssp             H-HHHHHSHHHHHHHHTHHHHHHHHHHHH--TTC-EEEEECCGGG--GBTCCCSSBCTTTCCCBCCCTTCGGGHHHHHHH
T ss_pred             c-cccccCCcccccccccccccccccccc--ccc-cccccccccc--cccccccccccccccccccccCCCcchhhhccc
Confidence            2 223455567889999999999999999  555 5678899888  88655544443221         22457 7888


Q ss_pred             HHHHHHHHhccCCCCeEEEEEecEEEeCCCCcc-------cchHHHH--HHHhCCCC---CCCCcceecccHHHHHHHHH
Q 018503          199 CREWEGTALKVNKDVRLALIRIGIVLGKDGGAL-------AKMIPLF--MMFAGGPL---GSGQQWFSWIHLDDIVNLIY  266 (355)
Q Consensus       199 ~~~~~~~~~~~~~~~~~~i~Rp~~i~G~~~~~~-------~~~~~~~--~~~~~~~~---~~~~~~~~~i~v~Dva~~~~  266 (355)
                      ..|.....+....+++++++||+.+||+.....       ......+  +...|+++   +++++.++|+|++|+|+++.
T Consensus       154 ~~E~~~~~~~~~~~~~~~i~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~r~~i~v~D~~~a~~  233 (342)
T d2blla1         154 LLDRVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEALY  233 (342)
T ss_dssp             HHHHHHHHHHHHHCCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEEGGGSCCEEECEEHHHHHHHHH
T ss_pred             chhhhhhhhhcccCceeEEeeccccccccccccccccccccccchHHHHHHHhCCCccccCCCCeeeeecccccccceee
Confidence            888888888877899999999999999864221       1223332  55567764   78899999999999999999


Q ss_pred             HHHhCCC---CCCceEecCCC-ccCHHHHHHHHHHHhCCCCC-CCCcHHHHH------HHhcccceeeecCccccchhHH
Q 018503          267 EALSNPS---YRGVINGTAPN-PVRLAEMCDHLGNVLGRPSW-LPVPEFALK------AVLGEGAFVVLEGQRVVPARAK  335 (355)
Q Consensus       267 ~~~~~~~---~~~~~~i~~~~-~~s~~el~~~i~~~~g~~~~-~~~~~~~~~------~~~~~~~~~~~~~~~~~~~k~~  335 (355)
                      .+++++.   .+++||+++++ ++|+.|+++.+.+.+++... ...|.....      ........ .....+.+++|++
T Consensus       234 ~~~~~~~~~~~g~~~Nig~~~~~~t~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~d~~k~~  312 (342)
T d2blla1         234 RIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLRHHFPPFAGFRVVESSSYYGKGYQ-DVEHRKPSIRNAH  312 (342)
T ss_dssp             HHHHCGGGTTTTEEEEECCTTSEEEHHHHHHHHHHHHHTCTTGGGSCCCCCEEEC-------------CCCCCBCCHHHH
T ss_pred             eehhhccccCCCeEEEEecccchhHHHHHHHHHHHHhCCCccccccCcccccceeccccccccccc-cccccccCHHHHH
Confidence            9998743   34599998765 58999999999999987632 222211100      00000000 0123345778886


Q ss_pred             h-CCCCCCccCHHHHHHHHhC
Q 018503          336 E-LGFPFKYRYVKDALKAIMS  355 (355)
Q Consensus       336 ~-lG~~p~~~~~~~~l~~~~~  355 (355)
                      + |||+|+++ ++|+|+++++
T Consensus       313 ~~lgw~P~~s-leegl~~ti~  332 (342)
T d2blla1         313 RCLDWEPKID-MQETIDETLD  332 (342)
T ss_dssp             HHHCCCCCCC-HHHHHHHHHH
T ss_pred             HHHCCCcCCC-HHHHHHHHHH
Confidence            4 99999996 9999999874

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.6e-36  Score=271.14  Aligned_cols=291  Identities=18%  Similarity=0.167  Sum_probs=206.6

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCC-----------CCCCccCCCeeecCCcchhhhcC--C
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP-----------GKKTRFFPGVMIAEEPQWRDCIQ--G  116 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-----------~~~~~~~~~~d~~~~~~~~~~~~--~  116 (355)
                      .+||||||||||||++|+++|++.||+|++++|..........           ......+..+|+.|.+.+.+++.  +
T Consensus         2 ~kKILITG~tGfIGs~lv~~Ll~~g~~V~~ld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~   81 (346)
T d1ek6a_           2 AEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKKYS   81 (346)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHCC
T ss_pred             CCeEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCccccccccchHHHHHHHHhcCCCcEEEEeeccccccccccccccc
Confidence            3699999999999999999999999999999863222111000           00000144578889999988775  5


Q ss_pred             CcEEEECCCCCCCCCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCCCCccccCCC---CCCCh
Q 018503          117 STAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESS---PSGND  193 (355)
Q Consensus       117 ~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~---~~~~~  193 (355)
                      +++++|+|+... ......++...++.|+.++.+++++++.  .++++|+|+||+.+  ||........+..   .+...
T Consensus        82 ~~~i~h~Aa~~~-~~~~~~~p~~~~~~Nv~gt~~l~~~~~~--~~v~~~i~~ss~~~--~~~~~~~~~~~~~~~~~~~~~  156 (346)
T d1ek6a_          82 FMAVIHFAGLKA-VGESVQKPLDYYRVNLTGTIQLLEIMKA--HGVKNLVFSSSATV--YGNPQYLPLDEAHPTGGCTNP  156 (346)
T ss_dssp             EEEEEECCSCCC-HHHHHHCHHHHHHHHHHHHHHHHHHHHH--TTCCEEEEEEEGGG--GCSCSSSSBCTTSCCCCCSSH
T ss_pred             cccccccccccC-cHhhHhCHHHHHHhhhcccccccchhhh--cCccccccccccee--eeccccccccccccccccCCh
Confidence            678999999753 2344556778899999999999999999  79999999999998  7755443333222   23456


Q ss_pred             h-HHHHHHHHHHHHhcc-CCCCeEEEEEecEEEeCCCCc---------ccchHHHH-H--HHhCCC---------CCCCC
Q 018503          194 Y-LAEVCREWEGTALKV-NKDVRLALIRIGIVLGKDGGA---------LAKMIPLF-M--MFAGGP---------LGSGQ  250 (355)
Q Consensus       194 y-~~k~~~~~~~~~~~~-~~~~~~~i~Rp~~i~G~~~~~---------~~~~~~~~-~--~~~~~~---------~~~~~  250 (355)
                      | .+|...|.....+.. ..+++++++||+.+||+....         ...+++.+ .  ...+.+         ...+.
T Consensus       157 Y~~~k~~~e~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~g~~~~~~~g~  236 (346)
T d1ek6a_         157 YGKSKFFIEEMIRDLCQADKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDGT  236 (346)
T ss_dssp             HHHHHHHHHHHHHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHHTSSSCEEEECSCSSSSSSS
T ss_pred             HHHHHHHHHHHHHHHHHhccCCceEEEeecceeccCCCCCcCccccccHHHHHHHHHHHHHcCCCcEEEcCCcccCCCCC
Confidence            7 777777766555443 459999999999999986421         12234333 2  222222         24677


Q ss_pred             cceecccHHHHHHHHHHHHhCC---CCCCceEecCCCccCHHHHHHHHHHHhCCCCCCCCcHHHHHHHhcccceeeecCc
Q 018503          251 QWFSWIHLDDIVNLIYEALSNP---SYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQ  327 (355)
Q Consensus       251 ~~~~~i~v~Dva~~~~~~~~~~---~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  327 (355)
                      +.++|+|++|+|.++..++...   ...++||+++++++|+.|+++.+.+.+|.+..+.....    ..++....     
T Consensus       237 ~~Rdfi~v~D~a~~~~~~~~~~~~~~~~~i~Ni~~~~~~s~~dl~~~i~~~~~~~~~~~~~~~----~~~e~~~~-----  307 (346)
T d1ek6a_         237 GVRDYIHVVDLAKGHIAALRKLKEQCGCRIYNLGTGTGYSVLQMVQAMEKASGKKIPYKVVAR----REGDVAAC-----  307 (346)
T ss_dssp             CEECEEEHHHHHHHHHHHHHHHTTTCCEEEEEECCSCCEEHHHHHHHHHHHHCSCCCEEEECC----CTTCCSEE-----
T ss_pred             eeEeEEEEEeccchhhhhccccccccCceEEEeCCCCcccHHHHHHHHHHHhCCCCCeEECCC----CCCCCCEe-----
Confidence            8899999999999998875532   23458999999999999999999999998733321111    12232222     


Q ss_pred             cccchhHHh-CCCCCCccCHHHHHHHHhC
Q 018503          328 RVVPARAKE-LGFPFKYRYVKDALKAIMS  355 (355)
Q Consensus       328 ~~~~~k~~~-lG~~p~~~~~~~~l~~~~~  355 (355)
                      ..+++|+++ |||+|+++ ++|+|+++++
T Consensus       308 ~~d~~k~~~~lgw~p~~s-lee~I~~~i~  335 (346)
T d1ek6a_         308 YANPSLAQEELGWTAALG-LDRMCEDLWR  335 (346)
T ss_dssp             CBCCHHHHHTTCCCCCCC-HHHHHHHHHH
T ss_pred             eECHHHHHHHHCCCcCCC-HHHHHHHHHH
Confidence            346677865 89999996 9999999874

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=7.3e-36  Score=271.46  Aligned_cols=295  Identities=17%  Similarity=0.168  Sum_probs=202.3

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhh-------ccCCC--------------CCCccCCCeeecCCc
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAE-------LIFPG--------------KKTRFFPGVMIAEEP  108 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-------~~~~~--------------~~~~~~~~~d~~~~~  108 (355)
                      +|||||||||||||++|+++|+++||+|++++.......       .+...              .....+..+|+.|.+
T Consensus         1 g~kILVTGatGfiG~~lv~~Ll~~g~~V~~iDnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~   80 (393)
T d1i24a_           1 GSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDICDFE   80 (393)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTTSHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEecCCcccccccccccccccccchHHHHHHHHhhcCCCcEEEEccCCCHH
Confidence            489999999999999999999999999999973211100       00000              000013456889999


Q ss_pred             chhhhcC--CCcEEEECCCCCCC--CCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCc-EEEEeeeeeeeeCCCCCc-
Q 018503          109 QWRDCIQ--GSTAVVNLAGTPIG--TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRP-SVLVSATALGYYGTSETE-  182 (355)
Q Consensus       109 ~~~~~~~--~~d~vi~~a~~~~~--~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~-~v~~Ss~~~~~yg~~~~~-  182 (355)
                      .+.++++  ++|+|||+|+....  .......+..+++.|+.++.+++++|++  .+.++ +++.||..+  |+..... 
T Consensus        81 ~l~~~~~~~~~d~ViHlAa~~~~~~s~~~~~~~~~~~~~Nv~gt~nll~~~~~--~~~~~~~i~~ss~~~--~~~~~~~~  156 (393)
T d1i24a_          81 FLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKE--FGEECHLVKLGTMGE--YGTPNIDI  156 (393)
T ss_dssp             HHHHHHHHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHH--HCTTCEEEEECCGGG--GCCCSSCB
T ss_pred             HHHHHHHhhcchheeccccccccccccccccccccccccccccccHHHHHHHH--hccccceeecccccc--cccccccc
Confidence            9999986  57999999987532  2234455677889999999999999998  55554 555555555  6532211 


Q ss_pred             -----cccC-------C--CCCCChh-HHHHHHHHHHHHhccCCCCeEEEEEecEEEeCCCCcc----------------
Q 018503          183 -----VFDE-------S--SPSGNDY-LAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGAL----------------  231 (355)
Q Consensus       183 -----~~~e-------~--~~~~~~y-~~k~~~~~~~~~~~~~~~~~~~i~Rp~~i~G~~~~~~----------------  231 (355)
                           ...+       .  ..+.+.| .+|...|.+...+..+.+++++++||+++||+.....                
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~~~l~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~  236 (393)
T d1i24a_         157 EEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKTDETEMHEELRNRLDYDAVF  236 (393)
T ss_dssp             CSSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECSCCTTGGGSGGGCCCCCCSTTT
T ss_pred             ccccccccccccccccccccccccHHHHHhhhhcccccccccccceeeeecccccccCCCcccccccccccccccccccc
Confidence                 0111       1  1234568 8899999988888888899999999999999874321                


Q ss_pred             cchHHHH--HHHhCCCC---CCCCcceecccHHHHHHHHHHHHhCCCCCCceEe--cCCCccCHHHHHHHHHHHhCCCC-
Q 018503          232 AKMIPLF--MMFAGGPL---GSGQQWFSWIHLDDIVNLIYEALSNPSYRGVING--TAPNPVRLAEMCDHLGNVLGRPS-  303 (355)
Q Consensus       232 ~~~~~~~--~~~~~~~~---~~~~~~~~~i~v~Dva~~~~~~~~~~~~~~~~~i--~~~~~~s~~el~~~i~~~~g~~~-  303 (355)
                      ..++..+  +...++++   +++.+.+||+|++|+|+++..+++++...+.|++  ++++.+|+.|+++.+.+..++.. 
T Consensus       237 ~~~i~~~~~~~~~~~~~~i~g~~~~~rd~v~v~D~~~a~~~~~~~~~~~g~~~~~~~~~~~~si~el~~~i~~~~~~~~~  316 (393)
T d1i24a_         237 GTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVEIAIANPAKAGEFRVFNQFTEQFSVNELASLVTKAGSKLGL  316 (393)
T ss_dssp             CCHHHHHHHHHHHTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHSCCCTTCEEEEEECSEEEEHHHHHHHHHHHHHTTTC
T ss_pred             ccchhhhhHHhhcCCeeEEeeecccccccccccchHHHHHHHHHhhcccceeeeecCCCCeeEHHHHHHHHHHHHHhhCC
Confidence            1223333  55566664   7899999999999999999999998776665544  45567999999999998875321 


Q ss_pred             CCCCcHHHHHHHhcccceeeecCccccchhHHhCCCCCCccCHHHHHHHHh
Q 018503          304 WLPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPFKYRYVKDALKAIM  354 (355)
Q Consensus       304 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~lG~~p~~~~~~~~l~~~~  354 (355)
                      .++..........++.     .....+++|+++|||+|+++ +++++++++
T Consensus       317 ~~~~~~~~~~~~~~~~-----~~~~~d~~k~~~LGw~P~~~-~~~~i~~~~  361 (393)
T d1i24a_         317 DVKKMTVPNPRVEAEE-----HYYNAKHTKLMELGLEPHYL-SDSLLDSLL  361 (393)
T ss_dssp             CCCEEEECCSSCSCSS-----CCCCBCCCHHHHTTCCCCCC-CHHHHHHHH
T ss_pred             CcceeeccCCCCCCCc-----cEecCCHHHHHHcCCccccC-HHHHHHHHH
Confidence            1111000000001111     12234567788899999996 999999876

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=3.2e-36  Score=268.46  Aligned_cols=295  Identities=16%  Similarity=0.118  Sum_probs=205.3

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhh-----ccCCCCC-----CccCCCeeecCCcchhhhcC--CC
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAE-----LIFPGKK-----TRFFPGVMIAEEPQWRDCIQ--GS  117 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-----~~~~~~~-----~~~~~~~d~~~~~~~~~~~~--~~  117 (355)
                      ++++||||||||||+||+++|+++||+|++++|..+...     .+.....     ...+...|+.+.+.+.+.++  ++
T Consensus         1 ~k~~LVTGatGfiG~~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~   80 (339)
T d1n7ha_           1 RKIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVIKP   80 (339)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHHCC
T ss_pred             CCEEEEeCCccHHHHHHHHHHHHCcCEEEEEECCCcccchhhhhhhhhhhhhccccceEEEEccccCHHHHHHHHhhhcc
Confidence            378999999999999999999999999999999654211     1111000     00122357777777877774  68


Q ss_pred             cEEEECCCCCCCCCCChhhHHHHHHHhhhhHHHHHHHHHcC---CCCCCcEEEEeeeeeeeeCCCCCccccCCCCC--CC
Q 018503          118 TAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINES---PEGVRPSVLVSATALGYYGTSETEVFDESSPS--GN  192 (355)
Q Consensus       118 d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~---~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~--~~  192 (355)
                      |+|||+|+... .....+++...+..|+.++.+++++++..   .....++++.||+.+  |+ ....+++|+++.  ..
T Consensus        81 D~Vih~Aa~~~-~~~~~~~p~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~ss~~~--~~-~~~~~~~E~~~~~p~~  156 (339)
T d1n7ha_          81 DEVYNLAAQSH-VAVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEM--FG-STPPPQSETTPFHPRS  156 (339)
T ss_dssp             SEEEECCSCCC-HHHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGG--GT-TSCSSBCTTSCCCCCS
T ss_pred             chhhhcccccc-ccccccCccccccccccccchhhhhhhhcccccccceeeeeccccee--cc-cCCCCCCCCCCCCCcc
Confidence            99999999742 22234566788899999999999988652   022334566666554  55 344567887764  45


Q ss_pred             hh-HHHHHHHHHHHHhccCCCCeEEEEEecEEEeCCCCcc--cc-hHHHH-HHHhCC-C-C--CCCCcceecccHHHHHH
Q 018503          193 DY-LAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGAL--AK-MIPLF-MMFAGG-P-L--GSGQQWFSWIHLDDIVN  263 (355)
Q Consensus       193 ~y-~~k~~~~~~~~~~~~~~~~~~~i~Rp~~i~G~~~~~~--~~-~~~~~-~~~~~~-~-~--~~~~~~~~~i~v~Dva~  263 (355)
                      .| .+|...|.....+...++++++++||+++|||..+..  .. +...+ ....+. + +  +++.+.++++|++|+|+
T Consensus       157 ~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~~~~~rd~~~v~D~a~  236 (339)
T d1n7ha_         157 PYAASKCAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLGNLQASRDWGFAGDYVE  236 (339)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCCCEEESCTTCEEECEEHHHHHH
T ss_pred             hhhHHHHHHHHHHHHHHHHhCCCEEEEEEccccCCCCCCCCCcchhhHHHHHHhcCCCCeEEeCCCCccccceeeehHHH
Confidence            67 8888888888888877899999999999999975321  11 22222 222332 2 2  78899999999999999


Q ss_pred             HHHHHHhCCCCCCceEecCCCccCHHHHHHHHHHHhCCCCCCCCcHHHHHHHhcccceeeecCccccchhHHh-CCCCCC
Q 018503          264 LIYEALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKE-LGFPFK  342 (355)
Q Consensus       264 ~~~~~~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~-lG~~p~  342 (355)
                      ++..++.++. .+.+++..+...++.++++.+.+.++......+.........++     ......+++|+++ |||+|+
T Consensus       237 ~~~~~~~~~~-~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~-----~~~~~~d~~Kak~~LGw~P~  310 (339)
T d1n7ha_         237 AMWLMLQQEK-PDDYVVATEEGHTVEEFLDVSFGYLGLNWKDYVEIDQRYFRPAE-----VDNLQGDASKAKEVLGWKPQ  310 (339)
T ss_dssp             HHHHHHTSSS-CCEEEECCSCEEEHHHHHHHHHHHTTCCGGGTEEECGGGSCSSC-----CCBCCBCCHHHHHHHCCCCC
T ss_pred             HHHHHHhcCC-CCccccccccccccchhhhhhhhhhhcccCceeeeccCCCCCCC-----CCeeeECHHHHHHHHCCCcC
Confidence            9999999875 45667777888999999999999999762211110000000111     1122346788865 899999


Q ss_pred             ccCHHHHHHHHhC
Q 018503          343 YRYVKDALKAIMS  355 (355)
Q Consensus       343 ~~~~~~~l~~~~~  355 (355)
                      ++ ++|+|+++++
T Consensus       311 ~~-le~gi~~ti~  322 (339)
T d1n7ha_         311 VG-FEKLVKMMVD  322 (339)
T ss_dssp             SC-HHHHHHHHHH
T ss_pred             CC-HHHHHHHHHH
Confidence            96 9999999873

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=2e-35  Score=264.00  Aligned_cols=287  Identities=20%  Similarity=0.197  Sum_probs=206.9

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhh-------cc-CCCCCCccCCCeeecCCcchhhhcC--CCcEE
Q 018503           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAE-------LI-FPGKKTRFFPGVMIAEEPQWRDCIQ--GSTAV  120 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-------~~-~~~~~~~~~~~~d~~~~~~~~~~~~--~~d~v  120 (355)
                      |.|||||||||||++|+++|+++||+|+++++......       .. ....   .+..+|+.|.+.+.++++  ++|+|
T Consensus         2 K~ILVTGatGfIG~~lv~~Ll~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~v---~~~~~Dl~d~~~l~~~~~~~~~d~V   78 (347)
T d1z45a2           2 KIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHI---PFYEVDLCDRKGLEKVFKEYKIDSV   78 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHHTSCC---CEEECCTTCHHHHHHHHHHSCCCEE
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcCeEEEEECCCCcchhHHHhHHhhcccCC---eEEEeecCCHHHHHHHHhccCCCEE
Confidence            45999999999999999999999999999987443211       11 1111   144578999999988875  79999


Q ss_pred             EECCCCCCCCCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCCCC----ccccCCCCC--CChh
Q 018503          121 VNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSET----EVFDESSPS--GNDY  194 (355)
Q Consensus       121 i~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~~----~~~~e~~~~--~~~y  194 (355)
                      ||+|+... .......+..+..+|+.++.+++++|++  .+++++|++||..+  ||....    .+++|+.+.  ...|
T Consensus        79 ihlAa~~~-~~~~~~~~~~~~~~N~~~t~~ll~~~~~--~~i~~~i~~SS~~v--yg~~~~~~~~~~~~e~~~~~p~~~Y  153 (347)
T d1z45a2          79 IHFAGLKA-VGESTQIPLRYYHNNILGTVVLLELMQQ--YNVSKFVFSSSATV--YGDATRFPNMIPIPEECPLGPTNPY  153 (347)
T ss_dssp             EECCSCCC-HHHHHHSHHHHHHHHHHHHHHHHHHHHH--HTCCEEEEEEEGGG--GCCGGGSTTCCSBCTTSCCCCCSHH
T ss_pred             EEcccccc-ccccccCcccccccchhhhHHHHHHHHh--cccceEEeecceee--ecCcccCCCCCccccccCCCCCChh
Confidence            99999752 2233455678889999999999999999  78999999999999  985443    346666553  4567


Q ss_pred             -HHHHHHHHHHHHhcc--CCCCeEEEEEecEEEeCCCCc---------ccchHHHH-HHH--hCCCC---------CCCC
Q 018503          195 -LAEVCREWEGTALKV--NKDVRLALIRIGIVLGKDGGA---------LAKMIPLF-MMF--AGGPL---------GSGQ  250 (355)
Q Consensus       195 -~~k~~~~~~~~~~~~--~~~~~~~i~Rp~~i~G~~~~~---------~~~~~~~~-~~~--~~~~~---------~~~~  250 (355)
                       .+|...|.....+..  ..+++++++||+++||+....         ...+++.+ ...  .+.++         .++.
T Consensus       154 ~~sK~~~E~~~~~~~~~~~~~~~~~~lR~~~v~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~i~g~~~~~~~~~  233 (347)
T d1z45a2         154 GHTKYAIENILNDLYNSDKKSWKFAILRYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREKLYIFGDDYDSRDGT  233 (347)
T ss_dssp             HHHHHHHHHHHHHHHHHSTTSCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHTTSSSCCCCC------CCSS
T ss_pred             HhHHHHHHHHHHHHHHhhccCCcEEEEeecceEeecCCCccCCCccccHHHHHHHHHHHHhcCCCCeEEeCCCccccCCc
Confidence             778777776665543  458999999999999975321         12344433 222  23332         2345


Q ss_pred             cceecccHHHHHHHHHHHHhCC-------CCCCceEecCCCccCHHHHHHHHHHHhCCCCCCCCcHHHHHHHhcccceee
Q 018503          251 QWFSWIHLDDIVNLIYEALSNP-------SYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVV  323 (355)
Q Consensus       251 ~~~~~i~v~Dva~~~~~~~~~~-------~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~  323 (355)
                      ..+|++++.|.+.+++.++...       ...++||+++++++|+.|+++.+.+.+|.+..+.....    ..++.    
T Consensus       234 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ni~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~----~~~~~----  305 (347)
T d1z45a2         234 PIRDYIHVVDLAKGHIAALQYLEAYNENEGLCREWNLGSGKGSTVFEVYHAFCKASGIDLPYKVTGR----RAGDV----  305 (347)
T ss_dssp             CEECEEEHHHHHHHHHHHHHHHHHSCTTCCEEEEEEESCSCCEEHHHHHHHHHHHHTCCCCC-------------C----
T ss_pred             eeeeeeeeecccccccccccccccccccccccccceecCCCcccHHHHHHHHHHHHCCCCceEeCCC----CCCCC----
Confidence            6788999999999988887631       13458999999999999999999999998743332211    11221    


Q ss_pred             ecCccccchhHHh-CCCCCCccCHHHHHHHHhC
Q 018503          324 LEGQRVVPARAKE-LGFPFKYRYVKDALKAIMS  355 (355)
Q Consensus       324 ~~~~~~~~~k~~~-lG~~p~~~~~~~~l~~~~~  355 (355)
                       ....++++|+++ |||+|+++ ++|+|+++++
T Consensus       306 -~~~~~d~sk~~~~lGw~p~~~-lee~i~~ti~  336 (347)
T d1z45a2         306 -LNLTAKPDRAKRELKWQTELQ-VEDSCKDLWK  336 (347)
T ss_dssp             -CCCCBCCHHHHHHTCCCCCCC-HHHHHHHHHH
T ss_pred             -CEeeECHHHHHHHHCCCCCCC-HHHHHHHHHH
Confidence             233467788865 99999996 9999999974

>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Trypanosoma brucei [TaxId: 5691]

Probab=100.00  E-value=5.9e-35  Score=264.47  Aligned_cols=289  Identities=17%  Similarity=0.181  Sum_probs=205.7

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHh-CCCeEEEEecCCchhhcc----------------C---CC--CCCccCCCeeecCC
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQA-DNHQVRVLTRSRSKAELI----------------F---PG--KKTRFFPGVMIAEE  107 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~-~g~~V~~~~r~~~~~~~~----------------~---~~--~~~~~~~~~d~~~~  107 (355)
                      .|||||||||||||++|+++|++ .||+|+++++-.......                .   ..  .....+...|+.|.
T Consensus         2 ~MKVLITG~tGfIGs~lv~~LL~~~~~~V~~~D~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~   81 (383)
T d1gy8a_           2 HMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNE   81 (383)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCH
T ss_pred             cCEEEEeCCCcHHHHHHHHHHHHhCCCEEEEEecCCcccccchhhhhhhhHHHHhhhhccccccccccceEEEECcccCH
Confidence            48999999999999999999986 699999998522111000                0   00  00001234688888


Q ss_pred             cchhhhcC---CCcEEEECCCCCCCCCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCCCC---
Q 018503          108 PQWRDCIQ---GSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSET---  181 (355)
Q Consensus       108 ~~~~~~~~---~~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~~---  181 (355)
                      +.++++++   ++|+|||+|+... .......+....+.|+.++.+++++++.  .++++++++||..+  |+....   
T Consensus        82 ~~l~~~~~~~~~~d~ViH~Aa~~~-~~~~~~~~~~~~~~N~~~t~~~l~~~~~--~~~~~~~~~~s~~~--~~~~~~~~~  156 (383)
T d1gy8a_          82 DFLNGVFTRHGPIDAVVHMCAFLA-VGESVRDPLKYYDNNVVGILRLLQAMLL--HKCDKIIFSSSAAI--FGNPTMGSV  156 (383)
T ss_dssp             HHHHHHHHHSCCCCEEEECCCCCC-HHHHHHCHHHHHHHHHHHHHHHHHHHHH--TTCCEEEEEEEGGG--TBSCCC---
T ss_pred             HHhhhhhhccceeehhhccccccc-ccccccccccccccccccccccchhhhc--cCCccccccccccc--ccccccccc
Confidence            88888874   6799999999742 2233455667888999999999999999  79999999999988  764332   


Q ss_pred             ----ccccCCCC--CCChh-HHHHHHHHHHHHhccCCCCeEEEEEecEEEeCCCCcc--------cchHHHH--HHH---
Q 018503          182 ----EVFDESSP--SGNDY-LAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGAL--------AKMIPLF--MMF---  241 (355)
Q Consensus       182 ----~~~~e~~~--~~~~y-~~k~~~~~~~~~~~~~~~~~~~i~Rp~~i~G~~~~~~--------~~~~~~~--~~~---  241 (355)
                          .+..|+.+  |...| .+|...+.+...+...++++++++||+++||+.....        ..+++.+  +..   
T Consensus       157 ~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~gl~~~~lR~~~vyG~~~~~~~~~~~~~~~~~ip~ii~~~~~~~  236 (383)
T d1gy8a_         157 STNAEPIDINAKKSPESPYGESKLIAERMIRDCAEAYGIKGICLRYFNACGAHEDGDIGEHYQGSTHLIPIILGRVMSDI  236 (383)
T ss_dssp             --CCCCBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECCCTTSSCSCCSTTCCSHHHHHHHHHHHHH
T ss_pred             cccccccccccCCCCCCHHHhhHhHHHHHHHHHHHHhCCCEEEEecceeeccCccccccccccccchhHHHHHHHHHhhc
Confidence                23445444  34667 8888888888888877899999999999999975321        1122221  111   


Q ss_pred             -------------hCCC---------CCCCCcceecccHHHHHHHHHHHHhCC---------CCCCceEecCCCccCHHH
Q 018503          242 -------------AGGP---------LGSGQQWFSWIHLDDIVNLIYEALSNP---------SYRGVINGTAPNPVRLAE  290 (355)
Q Consensus       242 -------------~~~~---------~~~~~~~~~~i~v~Dva~~~~~~~~~~---------~~~~~~~i~~~~~~s~~e  290 (355)
                                   .+.+         .++|.+.|+|+|++|+|++++.+++..         ...++||+++++++|+.|
T Consensus       237 ~~~~~~~~~~~~~~~~~~~i~g~~~~~~dg~~~Rdfi~v~D~~~a~~~~~~~~~~~~~~~~~~~~~i~Ni~s~~~~s~~e  316 (383)
T d1gy8a_         237 APDQRLTIHEDASTDKRMPIFGTDYPTPDGTCVRDYVHVCDLASAHILALDYVEKLGPNDKSKYFSVFNLGTSRGYSVRE  316 (383)
T ss_dssp             SCC-----------CCCEEEECSCSSSTTSSCEECEEEHHHHHHHHHHHHHHHHTCCTTTGGGSEEEEEESCSCCEEHHH
T ss_pred             cccccchhhhhhhcCCceEEeCCccccCCCCeEEeeEEHHHHHHHHHHHHhhhccccccccccCccEEEeCCCCceeHHH
Confidence                         1111         145788899999999999999998631         134589999999999999


Q ss_pred             HHHHHHHHhCCCCCCCCcHHHHHHHhcccceeeecCccccchhHHh-CCCCCCccCHHHHHHHH
Q 018503          291 MCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKE-LGFPFKYRYVKDALKAI  353 (355)
Q Consensus       291 l~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~-lG~~p~~~~~~~~l~~~  353 (355)
                      +++.+.+.+|.+..+.....    ..++...     ...+++|+++ |||+|+++ ++|+|+++
T Consensus       317 l~~~i~~~~~~~~~~~~~~~----~~~d~~~-----~~~d~~k~~k~LGw~P~~~-l~e~i~~t  370 (383)
T d1gy8a_         317 VIEVARKTTGHPIPVRECGR----REGDPAY-----LVAASDKAREVLGWKPKYD-TLEAIMET  370 (383)
T ss_dssp             HHHHHHHHHCCCCCEEEECC----CTTCCSE-----ECBCCHHHHHHTCCCCSCC-SHHHHHHH
T ss_pred             HHHHHHHHhCCCCceEECCC----CCCCcCE-----eeeCHHHHHHHHCCccCCC-HHHHHHHH
Confidence            99999999997743322110    1122222     2346677865 99999996 99999886

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

Probab=100.00  E-value=3.9e-34  Score=255.03  Aligned_cols=299  Identities=17%  Similarity=0.112  Sum_probs=207.0

Q ss_pred             CCcccCCCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCC------CCCCccCCCeeecCCcchhhhcCC
Q 018503           43 DHTQKASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP------GKKTRFFPGVMIAEEPQWRDCIQG  116 (355)
Q Consensus        43 ~~~~~~~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~------~~~~~~~~~~d~~~~~~~~~~~~~  116 (355)
                      +++.++.+++|||||||||||++|+++|+++||+|++++|+.++...+..      ..........|+.|.+.+.+++.+
T Consensus         4 ~~~~~~~gk~VlVTG~sGfIGs~l~~~Ll~~G~~V~~~vR~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~   83 (342)
T d1y1pa1           4 DNAVLPEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIKG   83 (342)
T ss_dssp             TTCSSCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTTT
T ss_pred             CCCCCCCcCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCchhHHHHHHhhhccccccccEEEeccccchhhhhhhccc
Confidence            34445567899999999999999999999999999999998755433211      000000133588899999999999


Q ss_pred             CcEEEECCCCCCCCCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCCC--CccccCC-------
Q 018503          117 STAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSE--TEVFDES-------  187 (355)
Q Consensus       117 ~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~--~~~~~e~-------  187 (355)
                      +|+|+|+++...    ....+..++..|+.++.+++++|.+. .+++++||+||..+..++...  +...+|+       
T Consensus        84 ~~~v~~~a~~~~----~~~~~~~~~~~nv~gt~~ll~~~~~~-~~v~~~i~~SS~~~~~~~~~~~~~~~~~e~~~~~~~~  158 (342)
T d1y1pa1          84 AAGVAHIASVVS----FSNKYDEVVTPAIGGTLNALRAAAAT-PSVKRFVLTSSTVSALIPKPNVEGIYLDEKSWNLESI  158 (342)
T ss_dssp             CSEEEECCCCCS----CCSCHHHHHHHHHHHHHHHHHHHHTC-TTCCEEEEECCGGGTCCCCTTCCCCEECTTCCCHHHH
T ss_pred             chhhhhhccccc----ccccccccccchhhhHHHHHHhhhcc-cccccccccccceeeccCCCCCCCccccccccccccc
Confidence            999999998642    12335577889999999999999883 478999999997653222211  1112222       


Q ss_pred             ---------CCC--CChh-HHHHHHHHHHHHhccC--CCCeEEEEEecEEEeCCCCcc---cchHHHH-HHHhCCCC--C
Q 018503          188 ---------SPS--GNDY-LAEVCREWEGTALKVN--KDVRLALIRIGIVLGKDGGAL---AKMIPLF-MMFAGGPL--G  247 (355)
Q Consensus       188 ---------~~~--~~~y-~~k~~~~~~~~~~~~~--~~~~~~i~Rp~~i~G~~~~~~---~~~~~~~-~~~~~~~~--~  247 (355)
                               .+.  ...| .+|...|.+...+...  .++.++++||+.+|||.....   ......+ ....+...  .
T Consensus       159 ~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~~i~p~~v~Gp~~~~~~~~~~~~~~~~~l~~g~~~~~~  238 (342)
T d1y1pa1         159 DKAKTLPESDPQKSLWVYAASKTEAELAAWKFMDENKPHFTLNAVLPNYTIGTIFDPETQSGSTSGWMMSLFNGEVSPAL  238 (342)
T ss_dssp             HHHHHSCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHCCSSEEEEEEESEEECCCSCTTTCCCHHHHHHHHHHTTCCCHHH
T ss_pred             cccccccccCCCCCcCcccchhHhHHHHHHHhhhhcccccccceecccceeCCCCCccccccchHHHHHHHHcCCcCccc
Confidence                     221  2246 7787777766555443  368889999999999853221   1122222 44455443  3


Q ss_pred             CCCcceecccHHHHHHHHHHHHhCCCCCCceEecCCCccCHHHHHHHHHHHhCCC-CCCCCcHHHHHHHhcccceeeecC
Q 018503          248 SGQQWFSWIHLDDIVNLIYEALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRP-SWLPVPEFALKAVLGEGAFVVLEG  326 (355)
Q Consensus       248 ~~~~~~~~i~v~Dva~~~~~~~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~  326 (355)
                      .++..++|+|++|+|++++.+++++...+.|++++++.+++.|+++.+.+.+... ....++.        .......-+
T Consensus       239 ~~~~~~~~v~v~Dva~~~i~~l~~~~~~g~~~~~~~~~~t~~eia~~i~k~~p~~~~~~~~~~--------~~~~~~~~~  310 (342)
T d1y1pa1         239 ALMPPQYYVSAVDIGLLHLGCLVLPQIERRRVYGTAGTFDWNTVLATFRKLYPSKTFPADFPD--------QGQDLSKFD  310 (342)
T ss_dssp             HTCCSEEEEEHHHHHHHHHHHHHCTTCCSCEEEECCEEECHHHHHHHHHHHCTTSCCCCCCCC--------CCCCCCEEC
T ss_pred             CCccceeeeeHHHHHHHHHHhhcCccccceEEEEcCCceEHHHHHHHHHHHcCCCcCCccCCc--------cCccccccc
Confidence            4566689999999999999999988878888899999999999999999998432 2122221        111111112


Q ss_pred             ccccchhHHhCCCCCCccCHHHHHHHHhC
Q 018503          327 QRVVPARAKELGFPFKYRYVKDALKAIMS  355 (355)
Q Consensus       327 ~~~~~~k~~~lG~~p~~~~~~~~l~~~~~  355 (355)
                      ...+..+++.+||.|.++ ++++|+++++
T Consensus       311 ~~~s~~~~k~lg~~~~~~-lee~i~d~I~  338 (342)
T d1y1pa1         311 TAPSLEILKSLGRPGWRS-IEESIKDLVG  338 (342)
T ss_dssp             CHHHHHHHHHTTCCSCCC-HHHHHHHHHC
T ss_pred             chHHHHHHHHcCCCCCcC-HHHHHHHHHH
Confidence            223445568899999886 9999999985

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=100.00  E-value=9.8e-35  Score=251.87  Aligned_cols=270  Identities=14%  Similarity=0.085  Sum_probs=201.3

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcC--CCcEEEECCCCCC
Q 018503           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ--GSTAVVNLAGTPI  128 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--~~d~vi~~a~~~~  128 (355)
                      |||||||||||||++|+++|.++||+|++++|+.                 +|+.|.+.+.++++  ++|+|||+|+.. 
T Consensus         2 MKIlItGasGfiG~~l~~~L~~~g~~Vi~~~r~~-----------------~D~~d~~~~~~~l~~~~~d~vih~a~~~-   63 (281)
T d1vl0a_           2 MKILITGANGQLGREIQKQLKGKNVEVIPTDVQD-----------------LDITNVLAVNKFFNEKKPNVVINCAAHT-   63 (281)
T ss_dssp             EEEEEESTTSHHHHHHHHHHTTSSEEEEEECTTT-----------------CCTTCHHHHHHHHHHHCCSEEEECCCCC-
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEeechh-----------------ccCCCHHHHHHHHHHcCCCEEEeecccc-
Confidence            7999999999999999999999999999998853                 57888888888886  679999999864 


Q ss_pred             CCCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCChh-HHHHHHHHHHHHh
Q 018503          129 GTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-LAEVCREWEGTAL  207 (355)
Q Consensus       129 ~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~~y-~~k~~~~~~~~~~  207 (355)
                      ........+......|+.....+.+.+..   ....++++||+.+  |+.....+.+|.+++.+.. +.+.+...+.  +
T Consensus        64 ~~~~~~~~~~~~~~~n~~~~~~~~~~~~~---~~~~~~~~ss~~v--~~~~~~~~~~e~~~~~~~~~~~~~k~~~e~--~  136 (281)
T d1vl0a_          64 AVDKCEEQYDLAYKINAIGPKNLAAAAYS---VGAEIVQISTDYV--FDGEAKEPITEFDEVNPQSAYGKTKLEGEN--F  136 (281)
T ss_dssp             CHHHHHHCHHHHHHHHTHHHHHHHHHHHH---HTCEEEEEEEGGG--SCSCCSSCBCTTSCCCCCSHHHHHHHHHHH--H
T ss_pred             ccccccccchhhccccccccccccccccc---cccccccccccee--eeccccccccccccccchhhhhhhhhHHHH--H
Confidence            22333445567778899999999888887   4457888888888  8877778888887765443 3333333222  2


Q ss_pred             ccCCCCeEEEEEecEEEeCCCCcccchHHHHHHHhCCCC-CCCCcceecccHHHHHHHHHHHHhCCCCCCceEecCCCcc
Q 018503          208 KVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPL-GSGQQWFSWIHLDDIVNLIYEALSNPSYRGVINGTAPNPV  286 (355)
Q Consensus       208 ~~~~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~v~Dva~~~~~~~~~~~~~~~~~i~~~~~~  286 (355)
                      ....+.+++++||+++||++.+....++.  ....+.++ ..++..++++|++|+++++..++++.. .|.||+++++.+
T Consensus       137 ~~~~~~~~~i~R~~~vyG~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~i~v~D~~~~~~~~~~~~~-~g~~~~~~~~~~  213 (281)
T d1vl0a_         137 VKALNPKYYIVRTAWLYGDGNNFVKTMIN--LGKTHDELKVVHDQVGTPTSTVDLARVVLKVIDEKN-YGTFHCTCKGIC  213 (281)
T ss_dssp             HHHHCSSEEEEEECSEESSSSCHHHHHHH--HHHHCSEEEEESSCEECCEEHHHHHHHHHHHHHHTC-CEEEECCCBSCE
T ss_pred             HHHhCCCccccceeEEeCCCcccccchhh--hhccCCceeecCCceeccchhhhhhhhhhhhhhhcc-cCceeEeCCCcc
Confidence            22347899999999999998654332222  33344443 445788999999999999999998875 679999999999


Q ss_pred             CHHHHHHHHHHHhCCCCCC-CCcHHHHHHHhcccceeeecCccccchhHHh-CCCCCCccCHHHHHHHHhC
Q 018503          287 RLAEMCDHLGNVLGRPSWL-PVPEFALKAVLGEGAFVVLEGQRVVPARAKE-LGFPFKYRYVKDALKAIMS  355 (355)
Q Consensus       287 s~~el~~~i~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~-lG~~p~~~~~~~~l~~~~~  355 (355)
                      |+.|+++.+++.+|++..+ +++...    ++.... ...+..++++|+++ +||+|+  +|+|+|+++++
T Consensus       214 s~~e~~~~i~~~~g~~~~i~~i~~~~----~~~~a~-rp~~~~ld~~k~~~~~g~~~~--~~~~~l~~~l~  277 (281)
T d1vl0a_         214 SWYDFAVEIFRLTGIDVKVTPCTTEE----FPRPAK-RPKYSVLRNYMLELTTGDITR--EWKESLKEYID  277 (281)
T ss_dssp             EHHHHHHHHHHHHCCCCEEEEECSTT----SCCSSC-CCSBCCBCCHHHHHTTCCCCC--BHHHHHHHHHH
T ss_pred             chHHHHHHHHHHhCCCceEEeccHHH----cCCcCC-CccccccCHHHHHHHhCCCCC--CHHHHHHHHHH
Confidence            9999999999999987433 333211    111110 01223468889965 899998  59999999874

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

Probab=100.00  E-value=1.4e-33  Score=251.03  Aligned_cols=288  Identities=17%  Similarity=0.149  Sum_probs=199.9

Q ss_pred             EEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhh-----ccCCCCCCccCCCeeecCCcchhhhcC--CCcEEEECC
Q 018503           52 TVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAE-----LIFPGKKTRFFPGVMIAEEPQWRDCIQ--GSTAVVNLA  124 (355)
Q Consensus        52 ~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-----~~~~~~~~~~~~~~d~~~~~~~~~~~~--~~d~vi~~a  124 (355)
                      ||||||||||||++|+++|+++||+|+++++-.....     .+..... ..+...|+.|.+.+.++++  ++|+|||+|
T Consensus         2 KILVTGatGfIGs~lv~~Ll~~g~~V~~id~~~~~~~~~~~~~~~~~~~-~~~i~~Di~~~~~l~~~~~~~~~d~Vih~a   80 (338)
T d1orra_           2 KLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSLGN-FEFVHGDIRNKNDVTRLITKYMPDSCFHLA   80 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHTTCC-CEEEECCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred             EEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhHHHHhhccCC-cEEEEcccCCHHHHHHHHHhcCCceEEeec
Confidence            7999999999999999999999999999985322211     1111100 0144578899999999886  469999999


Q ss_pred             CCCCCCCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCCCCcccc----------------CCC
Q 018503          125 GTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFD----------------ESS  188 (355)
Q Consensus       125 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~----------------e~~  188 (355)
                      +.... .....++...+++|+.++.+|++++.+  .+++++++.||+++. |+.....+..                +..
T Consensus        81 a~~~~-~~~~~~~~~~~~~Nv~gt~nll~~~~~--~~~~~~i~~sS~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (338)
T d1orra_          81 GQVAM-TTSIDNPCMDFEINVGGTLNLLEAVRQ--YNSNCNIIYSSTNKV-YGDLEQYKYNETETRYTCVDKPNGYDEST  156 (338)
T ss_dssp             CCCCH-HHHHHCHHHHHHHHHHHHHHHHHHHHH--HCTTCEEEEEEEGGG-GTTCTTSCEEECSSCEEETTCTTCBCTTS
T ss_pred             ccccc-cccccChHHHHHHHHHHHHHHHHhhhc--ccccccccccccccc-cccccccccccccccccccccccCcccCC
Confidence            97522 223445678899999999999999999  788888888887662 4433222111                111


Q ss_pred             CC--CChh-HHHHHHHHHHHHhccCCCCeEEEEEecEEEeCCCC--cccchHHHH-----HHH--hCCCC---CCCCcce
Q 018503          189 PS--GNDY-LAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGG--ALAKMIPLF-----MMF--AGGPL---GSGQQWF  253 (355)
Q Consensus       189 ~~--~~~y-~~k~~~~~~~~~~~~~~~~~~~i~Rp~~i~G~~~~--~~~~~~~~~-----~~~--~~~~~---~~~~~~~  253 (355)
                      +.  ...| ..|...+.........++....++|++++|++...  ........+     ...  .+.++   +++++.+
T Consensus       157 ~~~~~~~y~~~k~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~r  236 (338)
T d1orra_         157 QLDFHSPYGCSKGAADQYMLDYARIFGLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGINKPFTISGNGKQVR  236 (338)
T ss_dssp             CCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTCCCBTTBCHHHHHHHHHHHHHTTCCCCEEEESSSCCEE
T ss_pred             ccccccccccccchhhhhhhhhhhccCcccccccccceeeccccccccccccchhhHHHHHHHhccCCceEEeCCCceeE
Confidence            11  2334 56666666666666667999999999999976531  111222222     111  23443   7889999


Q ss_pred             ecccHHHHHHHHHHHHhCCC--CCCceEecC--CCccCHHHHHHHHHHHhCCCCCCC-CcHHHHHHHhcccceeeecCcc
Q 018503          254 SWIHLDDIVNLIYEALSNPS--YRGVINGTA--PNPVRLAEMCDHLGNVLGRPSWLP-VPEFALKAVLGEGAFVVLEGQR  328 (355)
Q Consensus       254 ~~i~v~Dva~~~~~~~~~~~--~~~~~~i~~--~~~~s~~el~~~i~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~  328 (355)
                      +|+|++|+|++++.+++...  .+++|++..  +..+++.|+++.+.+.++.+..+. .+..     .++.     ....
T Consensus       237 ~~~~v~D~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~-----~~~~-----~~~~  306 (338)
T d1orra_         237 DVLHAEDMISLYFTALANVSKIRGNAFNIGGTIVNSLSLLELFKLLEDYCNIDMRFTNLPVR-----ESDQ-----RVFV  306 (338)
T ss_dssp             ECEEHHHHHHHHHHHHHTHHHHTTCEEEESSCGGGEEEHHHHHHHHHHHHTCCCCEEEECCC-----SSCC-----SEEC
T ss_pred             eeecccchhhHHHHHHhccccccCccccccccccccccHHHHHHHHHHHHCCCceeEeCCCC-----CCCc-----Ceee
Confidence            99999999999999998754  466899854  467899999999999999763321 1110     1111     1223


Q ss_pred             ccchhHHh-CCCCCCccCHHHHHHHHhC
Q 018503          329 VVPARAKE-LGFPFKYRYVKDALKAIMS  355 (355)
Q Consensus       329 ~~~~k~~~-lG~~p~~~~~~~~l~~~~~  355 (355)
                      .+++|+++ |||+|+++ ++|+|+++++
T Consensus       307 ~d~~k~~~~Lg~~p~~s-l~e~i~~ti~  333 (338)
T d1orra_         307 ADIKKITNAIDWSPKVS-AKDGVQKMYD  333 (338)
T ss_dssp             BCCHHHHHHHCCCCCSC-HHHHHHHHHH
T ss_pred             ECHHHHHHHHCCCcCCC-HHHHHHHHHH
Confidence            46788865 99999996 9999999874

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

Probab=100.00  E-value=3.1e-33  Score=250.65  Aligned_cols=293  Identities=17%  Similarity=0.189  Sum_probs=200.9

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCC---CCCccCCCeeecCCcchhhhcC--CCcEEEECC
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG---KKTRFFPGVMIAEEPQWRDCIQ--GSTAVVNLA  124 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~---~~~~~~~~~d~~~~~~~~~~~~--~~d~vi~~a  124 (355)
                      .|||||||||||||++|++.|+++||+|++++|+..+...+...   ........+|+.|++.+.++++  .+|+|+|+|
T Consensus         8 ~KkILVTG~tGfIGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~l~~~~~~~~~~~v~~~a   87 (356)
T d1rkxa_           8 GKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQNKLLESIREFQPEIVFHMA   87 (356)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCccHHHHhhhhcccCCeEEEeeccChHhhhhhhhhchhhhhhhhh
Confidence            48999999999999999999999999999999987654332110   0001134568889988888876  679999999


Q ss_pred             CCCCCCCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCCCCccccCCCC--CCChh-HHHHHHH
Q 018503          125 GTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSP--SGNDY-LAEVCRE  201 (355)
Q Consensus       125 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~--~~~~y-~~k~~~~  201 (355)
                      +.... ......+...+++|+.++.++++++..  .+..++++.+|+++..++.....+.+|+.+  +...| ..|...+
T Consensus        88 a~~~~-~~~~~~~~~~~~~Nv~g~~n~l~~~~~--~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~p~~~y~~~k~~~e  164 (356)
T d1rkxa_          88 AQPLV-RLSYSEPVETYSTNVMGTVYLLEAIRH--VGGVKAVVNITSDKCYDNKEWIWGYRENEAMGGYDPYSNSKGCAE  164 (356)
T ss_dssp             SCCCH-HHHHHCHHHHHHHHTHHHHHHHHHHHH--HCCCCEEEEECCGGGBCCCCSSSCBCTTSCBCCSSHHHHHHHHHH
T ss_pred             ccccc-cccccCCccccccccccchhhhhhhhc--cccccccccccccccccccccccccccccccCCCCccccccccch
Confidence            87422 223456678899999999999999988  455555555555553233334445555544  34455 5555554


Q ss_pred             HHHHHhcc---------CCCCeEEEEEecEEEeCCCCcccchHHHH-HHHh-CCCC--CCCCcceecccHHHHHHHHHHH
Q 018503          202 WEGTALKV---------NKDVRLALIRIGIVLGKDGGALAKMIPLF-MMFA-GGPL--GSGQQWFSWIHLDDIVNLIYEA  268 (355)
Q Consensus       202 ~~~~~~~~---------~~~~~~~i~Rp~~i~G~~~~~~~~~~~~~-~~~~-~~~~--~~~~~~~~~i~v~Dva~~~~~~  268 (355)
                      .....+..         ..++.++++||+++|||+......+++.+ +... +.++  +.+++.++++|++|+|.++..+
T Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~vyGp~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~D~~~a~~~~  244 (356)
T d1rkxa_         165 LVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWALDRIVPDILRAFEQSQPVIIRNPHAIRPWQHVLEPLSGYLLL  244 (356)
T ss_dssp             HHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCCSSCHHHHHHHHHHTTCCEECSCTTCEECCEETHHHHHHHHHH
T ss_pred             hhhhHHhhhcccchhccccCceEEeccCCCeeCCCcchhhHHHHHHHHHHhCCCceEEeeccccccccccccccchhhhh
Confidence            44333221         34789999999999999865545555544 3333 3332  7788999999999999999998


Q ss_pred             HhCCCC-----CCc--eEecCCCccCHHHHHHHHHHHhCCCCCCCCcHHHHHHHhcccceeeecCccccchhHHh-CCCC
Q 018503          269 LSNPSY-----RGV--INGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKE-LGFP  340 (355)
Q Consensus       269 ~~~~~~-----~~~--~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~-lG~~  340 (355)
                      +.++..     ...  ++...+..+++.++++.+.+.++....+.......   ..+.     ....++.+|+++ |||+
T Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~---~~~~-----~~~~~d~skak~~LGw~  316 (356)
T d1rkxa_         245 AQKLYTDGAEYAEGWNFGPNDADATPVKNIVEQMVKYWGEGASWQLDGNAH---PHEA-----HYLKLDCSKAKMQLGWH  316 (356)
T ss_dssp             HHHHHHTCGGGCSEEECCCCGGGCEEHHHHHHHHHHHHCTTCCEEC----------CC-----CCCCBCCHHHHHHHCCC
T ss_pred             hhhhcccccccccccccccccccccccchhhhhhHHHhCCCccEEEcCCCC---CCCc-----CeeeEcHHHHHHHHCCC
Confidence            876431     122  23334567899999999999999875444332211   1121     223467788865 9999


Q ss_pred             CCccCHHHHHHHHh
Q 018503          341 FKYRYVKDALKAIM  354 (355)
Q Consensus       341 p~~~~~~~~l~~~~  354 (355)
                      |+++ ++++|++++
T Consensus       317 P~~~-l~egi~~ti  329 (356)
T d1rkxa_         317 PRWN-LNTTLEYIV  329 (356)
T ss_dssp             CCCC-HHHHHHHHH
T ss_pred             cCCC-HHHHHHHHH
Confidence            9996 999999986

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

Probab=99.98  E-value=3.6e-31  Score=231.92  Aligned_cols=279  Identities=14%  Similarity=0.147  Sum_probs=184.0

Q ss_pred             EEEEcCCchHHHHHHHHHHhCCC-eEEEEecCCchhhc--cCCCCCCccCCCeeecCCcch-h-----hhcCCCcEEEEC
Q 018503           53 VSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRSKAEL--IFPGKKTRFFPGVMIAEEPQW-R-----DCIQGSTAVVNL  123 (355)
Q Consensus        53 IlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~--~~~~~~~~~~~~~d~~~~~~~-~-----~~~~~~d~vi~~  123 (355)
                      |||||||||||++|+++|+++|+ +|+++++-......  ...      ....++.+.+.+ .     ..+..+++|+|+
T Consensus         2 ILITGgsGfIGs~lv~~L~~~g~~~V~~~d~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~   75 (307)
T d1eq2a_           2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLVD------LNIADYMDKEDFLIQIMAGEEFGDVEAIFHE   75 (307)
T ss_dssp             EEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGGGHHHHT------SCCSEEEEHHHHHHHHHTTCCCSSCCEEEEC
T ss_pred             EEEecCccHHHHHHHHHHHhCCCCeEEEEECCCCcchhhcccc------cchhhhccchHHHHHHhhhhcccchhhhhhh
Confidence            89999999999999999999995 79998754433211  111      222344433322 2     223467999999


Q ss_pred             CCCCCCCCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCCCCccccC--CCCCCChh-HHHHHH
Q 018503          124 AGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDE--SSPSGNDY-LAEVCR  200 (355)
Q Consensus       124 a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e--~~~~~~~y-~~k~~~  200 (355)
                      |+....   .........+.|+.++.++++++..  .++ ++++.||+.+  |+........+  ...+...| .+|...
T Consensus        76 aa~~~~---~~~~~~~~~~~~~~~~~~~l~~~~~--~~i-~~v~~ss~~~--~~~~~~~~~~~~~~~~~~~~Y~~~K~~~  147 (307)
T d1eq2a_          76 GACSST---TEWDGKYMMDNNYQYSKELLHYCLE--REI-PFLYASSAAT--YGGRTSDFIESREYEKPLNVYGYSKFLF  147 (307)
T ss_dssp             CSCCCT---TCCCHHHHHHHTHHHHHHHHHHHHH--HTC-CEEEEEEGGG--GTTCCSCBCSSGGGCCCSSHHHHHHHHH
T ss_pred             cccccc---ccccccccccccccccccccccccc--ccc-cccccccccc--cccccccccccccccccccccccccchh
Confidence            986422   3334566778899999999999988  566 5778788777  55443333333  33456678 889999


Q ss_pred             HHHHHHhccCCCCeEEEEEecEEEeCCCCcc---cchHHHH--HHHhCCCC----CCCCcceecccHHHHHHHHHHHHhC
Q 018503          201 EWEGTALKVNKDVRLALIRIGIVLGKDGGAL---AKMIPLF--MMFAGGPL----GSGQQWFSWIHLDDIVNLIYEALSN  271 (355)
Q Consensus       201 ~~~~~~~~~~~~~~~~i~Rp~~i~G~~~~~~---~~~~~~~--~~~~~~~~----~~~~~~~~~i~v~Dva~~~~~~~~~  271 (355)
                      |.....+..+.+++++++||+++|||.....   ......+  .+..++..    +.+...++|+|++|+++++..++..
T Consensus       148 e~~~~~~~~~~~~~~~~~r~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~r~~~~v~d~~~~~~~~~~~  227 (307)
T d1eq2a_         148 DEYVRQILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFLEN  227 (307)
T ss_dssp             HHHHHHHGGGCSSCEEEEEECEEESSSCGGGGGGSCHHHHHHHHHHC-------------CBCEEEHHHHHHHHHHHHHH
T ss_pred             hhhccccccccccccccccceeEeeccccccccccccccccccccccccceeeecCccceeeeeeecccHHHHHHHHhhh
Confidence            9999999888999999999999999975322   2223322  23333322    6777889999999999999999987


Q ss_pred             CCCCCceEecCCCccCHHHHHHHHHHHhCCCC--CCCCcHHHHHHHhcccceeeecCccccchhHHh-CCCCCCccCHHH
Q 018503          272 PSYRGVINGTAPNPVRLAEMCDHLGNVLGRPS--WLPVPEFALKAVLGEGAFVVLEGQRVVPARAKE-LGFPFKYRYVKD  348 (355)
Q Consensus       272 ~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~-lG~~p~~~~~~~  348 (355)
                      +. .+.||+++++++|+.|+++.+.+..++..  ..+.|......        .......+++|+++ +||+|+++ ++|
T Consensus       228 ~~-~~~~~~~~~~~~si~~i~~~i~~~~~~~~i~~~~~~~~~~~~--------~~~~~~~d~~k~~~~~~~~p~~s-l~e  297 (307)
T d1eq2a_         228 GV-SGIFNLGTGRAESFQAVADATLAYHKKGQIEYIPFPDKLKGR--------YQAFTQADLTNLRAAGYDKPFKT-VAE  297 (307)
T ss_dssp             CC-CEEEEESCSCCBCHHHHHHHC-----------------------------CCCSCCBCCHHHHHTTCCCCCCC-HHH
T ss_pred             cc-ccccccccccchhHHHHHHHHHHhcCCCCeeEeeCCccCCCC--------CceeeecCHHHHHHHHCCCCCCC-HHH
Confidence            64 67999999999999999999988776532  12222221111        11223346788865 79999996 999


Q ss_pred             HHHHHhC
Q 018503          349 ALKAIMS  355 (355)
Q Consensus       349 ~l~~~~~  355 (355)
                      +|+++++
T Consensus       298 gi~~~i~  304 (307)
T d1eq2a_         298 GVTEYMA  304 (307)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            9999873

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

Probab=99.97  E-value=1.9e-30  Score=226.38  Aligned_cols=276  Identities=13%  Similarity=0.099  Sum_probs=186.4

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcC--CCcEEEECCCCCC
Q 018503           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ--GSTAVVNLAGTPI  128 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--~~d~vi~~a~~~~  128 (355)
                      |||||||||||||++|++.|.+.|+.|. +++...             ....|+.|.+.+.++++  ++|+|||+||...
T Consensus         1 MKILItG~tGfiG~~l~~~L~~~g~~v~-~~~~~~-------------~~~~Dl~~~~~~~~~i~~~~~D~Vih~Aa~~~   66 (298)
T d1n2sa_           1 MNILLFGKTGQVGWELQRSLAPVGNLIA-LDVHSK-------------EFCGDFSNPKGVAETVRKLRPDVIVNAAAHTA   66 (298)
T ss_dssp             CEEEEECTTSHHHHHHHHHTTTTSEEEE-ECTTCS-------------SSCCCTTCHHHHHHHHHHHCCSEEEECCCCCC
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEE-EECCCc-------------cccCcCCCHHHHHHHHHHcCCCEEEEeccccc
Confidence            7999999999999999999999887554 444332             22368889999988886  5799999999753


Q ss_pred             CCCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCC--hh-HHHHHHHHHHH
Q 018503          129 GTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGN--DY-LAEVCREWEGT  205 (355)
Q Consensus       129 ~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~--~y-~~k~~~~~~~~  205 (355)
                       .......+...++.|+.++.++++++++  .+ .+++++||+.+  |+...+.+.+|.+++.+  .| ..|...|....
T Consensus        67 -~~~~~~~~~~~~~~n~~~~~~l~~~~~~--~~-~~~~~~ss~~~--~~~~~~~~~~E~~~~~p~~~y~~~k~~~e~~~~  140 (298)
T d1n2sa_          67 -VDKAESEPELAQLLNATSVEAIAKAANE--TG-AWVVHYSTDYV--FPGTGDIPWQETDATSPLNVYGKTKLAGEKALQ  140 (298)
T ss_dssp             -HHHHTTCHHHHHHHHTHHHHHHHHHHTT--TT-CEEEEEEEGGG--SCCCTTCCBCTTSCCCCSSHHHHHHHHHHHHHH
T ss_pred             -ccccccCccccccccccccccchhhhhc--cc-ccccccccccc--ccCCCCCCCccccccCCCchHhhhhhhhhhhHH
Confidence             2334556678889999999999999998  45 46889999888  77777788888887654  34 44433333332


Q ss_pred             HhccCCCCeEEEEEecEEEeCCCCcccchHHHHHHHhCCCC-CCCCcceecccHHHHHHHHHHHHh----CCCCCCceEe
Q 018503          206 ALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPL-GSGQQWFSWIHLDDIVNLIYEALS----NPSYRGVING  280 (355)
Q Consensus       206 ~~~~~~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~v~Dva~~~~~~~~----~~~~~~~~~i  280 (355)
                      .    ......++|++..++.........+.. ....+.++ ..++..++++|+.|+++++..++.    .+...++||+
T Consensus       141 ~----~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~i~~~~~~~~~~~~~n~  215 (298)
T d1n2sa_         141 D----NCPKHLIFRTSWVYAGKGNNFAKTMLR-LAKERQTLSVINDQYGAPTGAELLADCTAHAIRVALNKPEVAGLYHL  215 (298)
T ss_dssp             H----HCSSEEEEEECSEECSSSCCHHHHHHH-HHHHCSEEEEECSCEECCEEHHHHHHHHHHHHHHHHHCGGGCEEEEC
T ss_pred             h----hhcccccccccceeeccCCccchhhhh-hhcccceeecccceeecccccchHHHHHHHHHhhhhccccccccccc
Confidence            2    234456666666664433222111111 22333333 345677899999999999988875    3335679999


Q ss_pred             cCCCccCHHHHHHHHHHHhCCCC-CCCCcHH--HHHHHhcccceeeecCccccchhHHh-CCCCCCccCHHHHHHHHh
Q 018503          281 TAPNPVRLAEMCDHLGNVLGRPS-WLPVPEF--ALKAVLGEGAFVVLEGQRVVPARAKE-LGFPFKYRYVKDALKAIM  354 (355)
Q Consensus       281 ~~~~~~s~~el~~~i~~~~g~~~-~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~k~~~-lG~~p~~~~~~~~l~~~~  354 (355)
                      ++++.+++.|+++.+.+..++.. ....+..  .....+..... ...+..++++|+++ +||+|+  +|+++|++++
T Consensus       216 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~a~-RP~~~~ld~~K~~~~~~~~~~--~~~~gl~~~i  290 (298)
T d1n2sa_         216 VAGGTTTWHDYAALVFDEARKAGITLALTELNAVPTSAYPTPAS-RPGNSRLNTEKFQRNFDLILP--QWELGVKRML  290 (298)
T ss_dssp             CCBSCEEHHHHHHHHHHHHHHHTCCCCCCEEEEECSTTSCCSSC-CCSBCCBCCHHHHHHHTCCCC--BHHHHHHHHH
T ss_pred             cCCCceecHHHHHHHHhhhhccCccccccceeeeehhhcCccCC-CccccccCHHHHHHHHCCCCC--cHHHHHHHHH
Confidence            99999999999999988776431 1111110  00000000000 01123578899965 899998  5999999987

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

Probab=99.95  E-value=1.8e-28  Score=215.09  Aligned_cols=238  Identities=15%  Similarity=0.152  Sum_probs=162.6

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhcc--------CCCCCCccCCCeeecCCcchhhhcCCCcEEE
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELI--------FPGKKTRFFPGVMIAEEPQWRDCIQGSTAVV  121 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~--------~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi  121 (355)
                      ++||||||||||||++|+++|+++||+|++++|+.......        .....  ....+|+.|.+.+.+.+.++++++
T Consensus         3 k~KILVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~~v--~~v~~d~~d~~~~~~~~~~~~~~~   80 (312)
T d1qyda_           3 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGA--KLIEASLDDHQRLVDALKQVDVVI   80 (312)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTTTC--EEECCCSSCHHHHHHHHTTCSEEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCcccchhHHHHHhhhccCCc--EEEEeecccchhhhhhccCcchhh
Confidence            57899999999999999999999999999999976532111        11100  133468889999999999999999


Q ss_pred             ECCCCCCCCCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCChhHHHHHHH
Q 018503          122 NLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDYLAEVCRE  201 (355)
Q Consensus       122 ~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~~y~~k~~~~  201 (355)
                      ++++....            ..|..++.++++++..  .+..++++.||.++  ++.   ....+.. +...+   ...+
T Consensus        81 ~~~~~~~~------------~~~~~~~~~~l~~a~~--~~~~~~v~~Ss~g~--~~~---~~~~~~~-~~~~~---~~~~  137 (312)
T d1qyda_          81 SALAGGVL------------SHHILEQLKLVEAIKE--AGNIKRFLPSEFGM--DPD---IMEHALQ-PGSIT---FIDK  137 (312)
T ss_dssp             ECCCCSSS------------STTTTTHHHHHHHHHH--SCCCSEEECSCCSS--CTT---SCCCCCS-STTHH---HHHH
T ss_pred             hhhhhccc------------ccchhhhhHHHHHHHH--hcCCcEEEEeeccc--cCC---Ccccccc-hhhhh---hHHH
Confidence            99875321            2466677788888888  67778888887544  322   1111111 11222   2222


Q ss_pred             HHHHHhccCCCCeEEEEEecEEEeCCCCcccchHHHHHHHhCC--CCCCCCcceecccHHHHHHHHHHHHhCCCC-CC-c
Q 018503          202 WEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGG--PLGSGQQWFSWIHLDDIVNLIYEALSNPSY-RG-V  277 (355)
Q Consensus       202 ~~~~~~~~~~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~-~~-~  277 (355)
                      .....+....+++++++||+.+||+..+....+........+.  .++.+++.++++|++|+|++++.++.++.. ++ +
T Consensus       138 ~~~~~~~~~~~~~~~i~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~l~~~~~~~~~~  217 (312)
T d1qyda_         138 RKVRRAIEAASIPYTYVSSNMFAGYFAGSLAQLDGHMMPPRDKVLIYGDGNVKGIWVDEDDVGTYTIKSIDDPQTLNKTM  217 (312)
T ss_dssp             HHHHHHHHHTTCCBCEEECCEEHHHHTTTSSCTTCCSSCCSSEECCBTTSCSEEEEECHHHHHHHHHHHTTCGGGSSSEE
T ss_pred             HHHHHhhcccccceEEeccceeecCCccchhhHHHHhhhcccccccccccccccceeeHHHHHHHHHHHhcCccccCceE
Confidence            2333344456899999999999997543322211111001111  137889999999999999999999988764 44 4


Q ss_pred             eEecCCCccCHHHHHHHHHHHhCCC-CCCCCcHHHH
Q 018503          278 INGTAPNPVRLAEMCDHLGNVLGRP-SWLPVPEFAL  312 (355)
Q Consensus       278 ~~i~~~~~~s~~el~~~i~~~~g~~-~~~~~~~~~~  312 (355)
                      |++++++.+|++|+++.+++.+|++ ...++|.+..
T Consensus       218 ~~~~~~~~~s~~e~~~~~~~~~g~~~~~~~i~~~~~  253 (312)
T d1qyda_         218 YIRPPMNILSQKEVIQIWERLSEQNLDKIYISSQDF  253 (312)
T ss_dssp             ECCCGGGEEEHHHHHHHHHHHHTCCCEECCBCSHHH
T ss_pred             EEeCCCcCCCHHHHHHHHHHHHCCCCeEEECCHHHH
Confidence            6666677899999999999999988 3445665443

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

Probab=99.95  E-value=1.7e-28  Score=214.37  Aligned_cols=233  Identities=15%  Similarity=0.150  Sum_probs=159.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccC---------CCCCCccCCCeeecCCcchhhhcCCCcE
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIF---------PGKKTRFFPGVMIAEEPQWRDCIQGSTA  119 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~---------~~~~~~~~~~~d~~~~~~~~~~~~~~d~  119 (355)
                      ++|||||||||||||++++++|+++||+|++++|++.......         ....  .....|+.+.+.+.+.+++++.
T Consensus         2 ~kkKILVtGatG~iG~~l~~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~--~~~~~d~~~~~~~~~~~~~~~~   79 (307)
T d1qyca_           2 SRSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGA--NIVHGSIDDHASLVEAVKNVDV   79 (307)
T ss_dssp             CCCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTC--EEECCCTTCHHHHHHHHHTCSE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEECCCccccchhHHHHHHhhccCCc--EEEEeecccchhhhhhhhhcee
Confidence            4689999999999999999999999999999999876532110         0000  0233567777788888889999


Q ss_pred             EEECCCCCCCCCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCChhHHHHH
Q 018503          120 VVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDYLAEVC  199 (355)
Q Consensus       120 vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~~y~~k~~  199 (355)
                      |||+++.                .+..++.++++++..  .+++++++.|+...  +.       ++....... .....
T Consensus        80 vi~~~~~----------------~~~~~~~~~~~a~~~--~~~~~~~~~s~~~~--~~-------~~~~~~~~~-~~~~~  131 (307)
T d1qyca_          80 VISTVGS----------------LQIESQVNIIKAIKE--VGTVKRFFPSEFGN--DV-------DNVHAVEPA-KSVFE  131 (307)
T ss_dssp             EEECCCG----------------GGSGGGHHHHHHHHH--HCCCSEEECSCCSS--CT-------TSCCCCTTH-HHHHH
T ss_pred             eeecccc----------------cccchhhHHHHHHHH--hccccceeeecccc--cc-------ccccccccc-ccccc
Confidence            9999863                355566788888888  67888888776433  11       111111111 11111


Q ss_pred             HHHHHHHhccCCCCeEEEEEecEEEeCCCCcccchHHHHHHHhCCC---CCCCCcceecccHHHHHHHHHHHHhCCCC-C
Q 018503          200 REWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGP---LGSGQQWFSWIHLDDIVNLIYEALSNPSY-R  275 (355)
Q Consensus       200 ~~~~~~~~~~~~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~i~v~Dva~~~~~~~~~~~~-~  275 (355)
                      .....+.+....+++++++||+.+||+..+.+..+..  ....+..   ++.+++.++++|++|+|++++.++.++.. +
T Consensus       132 ~~~~~~~~~~~~~~~~~i~r~~~v~g~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~~~  209 (307)
T d1qyca_         132 VKAKVRRAIEAEGIPYTYVSSNCFAGYFLRSLAQAGL--TAPPRDKVVILGDGNARVVFVKEEDIGTFTIKAVDDPRTLN  209 (307)
T ss_dssp             HHHHHHHHHHHHTCCBEEEECCEEHHHHTTTTTCTTC--SSCCSSEEEEETTSCCEEEEECHHHHHHHHHTTSSCGGGTT
T ss_pred             ccccccchhhccCCCceecccceecCCCccchhhhhh--hhhhcccceeeecccccccCCcHHHHHHHHHHHhcChhhcC
Confidence            2222222333358999999999999986543322211  1112221   27789999999999999999999988763 3


Q ss_pred             C-ceEecCCCccCHHHHHHHHHHHhCCCC-CCCCcHHHHH
Q 018503          276 G-VINGTAPNPVRLAEMCDHLGNVLGRPS-WLPVPEFALK  313 (355)
Q Consensus       276 ~-~~~i~~~~~~s~~el~~~i~~~~g~~~-~~~~~~~~~~  313 (355)
                      + +|++++++.+|+.|+++.+++++|++. ...+|.+...
T Consensus       210 ~~~~~~~~~~~~s~~ei~~~~~~~~G~~~~~~~~~~~~~~  249 (307)
T d1qyca_         210 KTLYLRLPANTLSLNELVALWEKKIDKTLEKAYVPEEEVL  249 (307)
T ss_dssp             EEEECCCGGGEEEHHHHHHHHHHHTTSCCEEEEECHHHHH
T ss_pred             ceeEEeCCCCccCHHHHHHHHHHHHCCCCcEEECCHHHHH
Confidence            3 566777889999999999999999883 3455555443

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=1.8e-26  Score=189.77  Aligned_cols=200  Identities=15%  Similarity=0.104  Sum_probs=141.9

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcCCCcEEEECCCCC
Q 018503           48 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTP  127 (355)
Q Consensus        48 ~~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~~  127 (355)
                      |.++||+||||||++|++++++|+++||+|++++|++++.........  ....+|+.|.+++.++++++|+|||++|..
T Consensus         1 m~~kkIlV~GatG~iG~~v~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~--~~~~gD~~d~~~l~~al~~~d~vi~~~g~~   78 (205)
T d1hdoa_           1 MAVKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEGPRPA--HVVVGDVLQAADVDKTVAGQDAVIVLLGTR   78 (205)
T ss_dssp             CCCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSSSCCCS--EEEESCTTSHHHHHHHHTTCSEEEECCCCT
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEEcChhhccccccccc--ccccccccchhhHHHHhcCCCEEEEEeccC
Confidence            345799999999999999999999999999999999877554432211  144578899999999999999999999864


Q ss_pred             CCCCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCChh-HHHHHHHHHHHH
Q 018503          128 IGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-LAEVCREWEGTA  206 (355)
Q Consensus       128 ~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~~y-~~k~~~~~~~~~  206 (355)
                      ...  ..      .+.+..++.++++++++  .++++||++||.++  |++....+     +....| ..+...+    .
T Consensus        79 ~~~--~~------~~~~~~~~~~l~~aa~~--~~v~r~i~~ss~~~--~~~~~~~~-----~~~~~~~~~~~~~e----~  137 (205)
T d1hdoa_          79 NDL--SP------TTVMSEGARNIVAAMKA--HGVDKVVACTSAFL--LWDPTKVP-----PRLQAVTDDHIRMH----K  137 (205)
T ss_dssp             TCC--SC------CCHHHHHHHHHHHHHHH--HTCCEEEEECCGGG--TSCTTCSC-----GGGHHHHHHHHHHH----H
T ss_pred             Cch--hh------hhhhHHHHHHHHHHHHh--cCCCeEEEEeeeec--cCCCcccc-----ccccccchHHHHHH----H
Confidence            221  11      13567789999999999  89999999999877  55322211     011122 2222222    2


Q ss_pred             hccCCCCeEEEEEecEEEeCCCCcccchHHHHHHHhCCCCCCCCcceecccHHHHHHHHHHHHhCCCC-CCceEec
Q 018503          207 LKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSY-RGVINGT  281 (355)
Q Consensus       207 ~~~~~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~-~~~~~i~  281 (355)
                      +..+.+++|+++||+.+++........+           ...++....+|+.+|+|++++.+++++.. +..+.++
T Consensus       138 ~l~~~~~~~tiirp~~~~~~~~~~~~~~-----------~~~~~~~~~~i~~~DvA~~~~~~l~~~~~~g~~~~~s  202 (205)
T d1hdoa_         138 VLRESGLKYVAVMPPHIGDQPLTGAYTV-----------TLDGRGPSRVISKHDLGHFMLRCLTTDEYDGHSTYPS  202 (205)
T ss_dssp             HHHHTCSEEEEECCSEEECCCCCSCCEE-----------ESSSCSSCSEEEHHHHHHHHHHTTSCSTTTTCEEEEE
T ss_pred             HHHhcCCceEEEecceecCCCCcccEEE-----------eeCCCCCCCcCCHHHHHHHHHHHhCCCCCCCEEEecC
Confidence            2234699999999999987543211011           12355567799999999999999998874 4455554

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=3e-26  Score=192.12  Aligned_cols=208  Identities=16%  Similarity=0.126  Sum_probs=144.9

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHhCC--CeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcCCCcEEEECCC
Q 018503           48 ASQMTVSVTGATGFIGRRLVQRLQADN--HQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG  125 (355)
Q Consensus        48 ~~~~~IlVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~  125 (355)
                      |++|+|||||||||+|++|+++|+++|  ++|++++|++..........  .....+|+.+.+++.++++++|+|||+++
T Consensus        12 m~~k~IlItGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~~~~~~~~~~--i~~~~~D~~~~~~~~~~~~~~d~vi~~~~   89 (232)
T d2bkaa1          12 MQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYKN--VNQEVVDFEKLDDYASAFQGHDVGFCCLG   89 (232)
T ss_dssp             HTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGGGGG--CEEEECCGGGGGGGGGGGSSCSEEEECCC
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCCCEEEEEecChhhhcccccce--eeeeeeccccccccccccccccccccccc
Confidence            456799999999999999999999998  48999999875433221110  01223577788888899999999999998


Q ss_pred             CCCCCCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCChhHHHHHHHHHHH
Q 018503          126 TPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDYLAEVCREWEGT  205 (355)
Q Consensus       126 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~~y~~k~~~~~~~~  205 (355)
                      ..    ........+.++|+.++.+++++|++  .++++|||+||..+  ++.           ....| .+.+.+.+..
T Consensus        90 ~~----~~~~~~~~~~~~~~~~~~~~~~~a~~--~~v~~fi~~Ss~~~--~~~-----------~~~~Y-~~~K~~~E~~  149 (232)
T d2bkaa1          90 TT----RGKAGAEGFVRVDRDYVLKSAELAKA--GGCKHFNLLSSKGA--DKS-----------SNFLY-LQVKGEVEAK  149 (232)
T ss_dssp             CC----HHHHHHHHHHHHHTHHHHHHHHHHHH--TTCCEEEEECCTTC--CTT-----------CSSHH-HHHHHHHHHH
T ss_pred             cc----ccccchhhhhhhcccccceeeecccc--cCccccccCCcccc--ccC-----------ccchh-HHHHHHhhhc
Confidence            53    22344567789999999999999999  79999999999876  432           12334 3333333333


Q ss_pred             HhccCCCC-eEEEEEecEEEeCCCCcccchHHHH-HHHhCCCCCCCCcceecccHHHHHHHHHHHHhCCCCCCceEecC
Q 018503          206 ALKVNKDV-RLALIRIGIVLGKDGGALAKMIPLF-MMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRGVINGTA  282 (355)
Q Consensus       206 ~~~~~~~~-~~~i~Rp~~i~G~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~~~~~~i~~  282 (355)
                      ..  +.++ +++|+||+.+||+....  .....+ ..... .+.........|+++|+|++++.++..+..++.+.+.+
T Consensus       150 l~--~~~~~~~~IlRP~~i~G~~~~~--~~~~~~~~~~~~-~~~~~~~~~~~I~~~dvA~a~i~~~~~~~~~~~~i~~~  223 (232)
T d2bkaa1         150 VE--ELKFDRYSVFRPGVLLCDRQES--RPGEWLVRKFFG-SLPDSWASGHSVPVVTVVRAMLNNVVRPRDKQMELLEN  223 (232)
T ss_dssp             HH--TTCCSEEEEEECCEEECTTGGG--SHHHHHHHHHHC-SCCTTGGGGTEEEHHHHHHHHHHHHTSCCCSSEEEEEH
T ss_pred             cc--cccccceEEecCceeecCCCcC--cHHHHHHHHHhh-ccCCcccCCCeEEHHHHHHHHHHHHhcCccCCeEEEcH
Confidence            22  2455 59999999999986532  122221 21211 22233334457999999999999998887666776653

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.92  E-value=7.2e-26  Score=191.43  Aligned_cols=230  Identities=17%  Similarity=0.124  Sum_probs=155.7

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCCe--EEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcCCCcEEEECCCCC
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNHQ--VRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTP  127 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~~--V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~~  127 (355)
                      +++|||||||||||++++++|+++||+  |++++|++++...+.....   ....|+.+.+.+.++++++|+|||+++..
T Consensus         3 ~~tVlVtGatG~iG~~l~~~Ll~~g~~v~v~~~~R~~~~~~~~~~~~~---~~~~d~~~~~~~~~~~~~~d~vi~~a~~~   79 (252)
T d2q46a1           3 LPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIGGEAD---VFIGDITDADSINPAFQGIDALVILTSAV   79 (252)
T ss_dssp             CCEEEEESTTSTTHHHHHHHHHHTTTTCEEEEEESCHHHHHHTTCCTT---EEECCTTSHHHHHHHHTTCSEEEECCCCC
T ss_pred             CCEEEEECCccHHHHHHHHHHHHCCCcEEEEEEcCCHHHHHhccCCcE---EEEeeeccccccccccccceeeEEEEeec
Confidence            468999999999999999999999964  7778888876655443322   45578889999999999999999999864


Q ss_pred             CCC------------CCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCChhH
Q 018503          128 IGT------------RWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDYL  195 (355)
Q Consensus       128 ~~~------------~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~~y~  195 (355)
                      ...            ............+|+.++++++..+..  ...+.+.+.|+...  +....  +..  ......| 
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~s~~~~--~~~~~--~~~--~~~~~~~-  150 (252)
T d2q46a1          80 PKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKV--AGVKHIVVVGSMGG--TNPDH--PLN--KLGNGNI-  150 (252)
T ss_dssp             CEECTTCCTTSCCCCCEECCTTCSHHHHTTHHHHHHHHHHHH--HTCSEEEEEEETTT--TCTTC--GGG--GGGGCCH-
T ss_pred             cccccccchhhhhhcccccccchhhhccccccceeecccccc--cccccccccccccc--CCCCc--ccc--cccccch-
Confidence            210            001122344567899999999999888  67778888777544  22111  000  0011112 


Q ss_pred             HHHHHHHHHHHhccCCCCeEEEEEecEEEeCCCCcccchHHHHHHHhCCCCCCCCcceecccHHHHHHHHHHHHhCCCC-
Q 018503          196 AEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSY-  274 (355)
Q Consensus       196 ~k~~~~~~~~~~~~~~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~-  274 (355)
                        ...+.....+....+++++++||+++||+.......+..       ..........+++|++|+|++++.+++++.. 
T Consensus       151 --~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~-------~~~~~~~~~~~~i~~~Dva~a~~~~l~~~~~~  221 (252)
T d2q46a1         151 --LVWKRKAEQYLADSGTPYTIIRAGGLLDKEGGVRELLVG-------KDDELLQTDTKTVPRADVAEVCIQALLFEEAK  221 (252)
T ss_dssp             --HHHHHHHHHHHHHSSSCEEEEEECEEECSCTTSSCEEEE-------STTGGGGSSCCEEEHHHHHHHHHHHTTCGGGT
T ss_pred             --hhhhhhhhhhhhcccccceeecceEEECCCcchhhhhhc-------cCcccccCCCCeEEHHHHHHHHHHHhCCcccc
Confidence              122233334444569999999999999997543322211       1111123345799999999999999998774 


Q ss_pred             CCceEecCCC---ccCHHHHHHHHHHHhC
Q 018503          275 RGVINGTAPN---PVRLAEMCDHLGNVLG  300 (355)
Q Consensus       275 ~~~~~i~~~~---~~s~~el~~~i~~~~g  300 (355)
                      +++||++++.   ..++.|+.+++.+..+
T Consensus       222 g~~~~i~~~~~~~~~~~~~~~~lf~~i~~  250 (252)
T d2q46a1         222 NKAFDLGSKPEGTSTPTKDFKALFSQVTS  250 (252)
T ss_dssp             TEEEEEEECCTTTSCCCCCHHHHHTTCCC
T ss_pred             CcEEEEeeCCCCCChhHHHHHHHHHHHHh
Confidence            4499998643   4678888887776554

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.90  E-value=1.8e-23  Score=172.70  Aligned_cols=194  Identities=16%  Similarity=0.134  Sum_probs=128.0

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCC--eEEEEecCCchhhccCCCCCCccCCCeeecCCcchhh-hcCCCcEEEECCCC
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNH--QVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRD-CIQGSTAVVNLAGT  126 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~-~~~~~d~vi~~a~~  126 (355)
                      ++||||||||||||++|+++|+++|+  +|++++|++.....         ....+..|..++.+ +..++|+|||++|.
T Consensus         2 ~KkIlItGatG~iG~~lv~~L~~~~~~~~v~~~~r~~~~~~~---------~~~~~~~d~~~~~~~~~~~~d~vi~~~g~   72 (212)
T d2a35a1           2 PKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALAEHP---------RLDNPVGPLAELLPQLDGSIDTAFCCLGT   72 (212)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCCCCT---------TEECCBSCHHHHGGGCCSCCSEEEECCCC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEEEeCCchhhcc---------cccccccchhhhhhccccchheeeeeeee
Confidence            47999999999999999999999997  67777776533211         01112223333333 33568999999986


Q ss_pred             CCCCCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCChh-HHHHHHHHHHH
Q 018503          127 PIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-LAEVCREWEGT  205 (355)
Q Consensus       127 ~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~~y-~~k~~~~~~~~  205 (355)
                      ...   .......+.+.|+.++.+++++|++  .++++++++||.++  ++.           ....| ..|...|  ..
T Consensus        73 ~~~---~~~~~~~~~~~~~~~~~~~~~~a~~--~~v~~~i~~Ss~~~--~~~-----------~~~~y~~~K~~~E--~~  132 (212)
T d2a35a1          73 TIK---EAGSEEAFRAVDFDLPLAVGKRALE--MGARHYLVVSALGA--DAK-----------SSIFYNRVKGELE--QA  132 (212)
T ss_dssp             CHH---HHSSHHHHHHHHTHHHHHHHHHHHH--TTCCEEEEECCTTC--CTT-----------CSSHHHHHHHHHH--HH
T ss_pred             ecc---ccccccccccchhhhhhhccccccc--cccccccccccccc--ccc-----------cccchhHHHHHHh--hh
Confidence            421   2233467889999999999999999  89999999999876  432           12334 4443333  32


Q ss_pred             HhccCCCC-eEEEEEecEEEeCCCCcccchHHHHHHHhCCCC-CCCCcceecccHHHHHHHHHHHHhCCCCCCceEec
Q 018503          206 ALKVNKDV-RLALIRIGIVLGKDGGALAKMIPLFMMFAGGPL-GSGQQWFSWIHLDDIVNLIYEALSNPSYRGVINGT  281 (355)
Q Consensus       206 ~~~~~~~~-~~~i~Rp~~i~G~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~v~Dva~~~~~~~~~~~~~~~~~i~  281 (355)
                      ..  +.++ +++|+||+.+||+.....  +..    ....++ ......+.+||++|+|++++.+++++. .|.+.+.
T Consensus       133 l~--~~~~~~~~I~Rp~~v~G~~~~~~--~~~----~~~~~~~~~~~~~~~~i~v~DvA~ai~~~~~~~~-~g~~~~~  201 (212)
T d2a35a1         133 LQ--EQGWPQLTIARPSLLFGPREEFR--LAE----ILAAPIARILPGKYHGIEACDLARALWRLALEEG-KGVRFVE  201 (212)
T ss_dssp             HT--TSCCSEEEEEECCSEESTTSCEE--GGG----GTTCCCC----CHHHHHHHHHHHHHHHHHHTCCC-SEEEEEE
T ss_pred             cc--ccccccceeeCCcceeCCccccc--HHH----HHHHHHhhccCCCCcEEEHHHHHHHHHHHHcCCC-CCCEEEE
Confidence            22  3455 699999999999875432  111    011121 111223567999999999999998875 4554443

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

Probab=99.88  E-value=1.7e-22  Score=179.75  Aligned_cols=230  Identities=14%  Similarity=0.136  Sum_probs=150.8

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhc--cCCCCCCccCCCeeecCCc-chhhhcCCCcEEEECCCC
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAEL--IFPGKKTRFFPGVMIAEEP-QWRDCIQGSTAVVNLAGT  126 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~--~~~~~~~~~~~~~d~~~~~-~~~~~~~~~d~vi~~a~~  126 (355)
                      +|+|+|||||||||++|+++|+++||+|++++|++++...  +...... .....|+.|.. .++.++.++|+++++...
T Consensus         3 kktIlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~v-~~~~gD~~d~~~~~~~a~~~~~~~~~~~~~   81 (350)
T d1xgka_           3 KKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQAIPNV-TLFQGPLLNNVPLMDTLFEGAHLAFINTTS   81 (350)
T ss_dssp             CCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHHHHHHTSTTE-EEEESCCTTCHHHHHHHHTTCSEEEECCCS
T ss_pred             CCEEEEECCChHHHHHHHHHHHhCCCeEEEEECCcchhhhhhhcccCCC-EEEEeeCCCcHHHHHHHhcCCceEEeeccc
Confidence            5799999999999999999999999999999998765432  1111100 02335777754 467788999999887642


Q ss_pred             CCCCCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCChhHHHHHHHHHHHH
Q 018503          127 PIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDYLAEVCREWEGTA  206 (355)
Q Consensus       127 ~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~~y~~k~~~~~~~~~  206 (355)
                      ..             ..++..+.++++++.+  .+++++++.||...  ....      ...+..+.+..|...+    .
T Consensus        82 ~~-------------~~~~~~~~~~~~aa~~--agv~~~v~~Ss~~~--~~~~------~~~~~~~~~~~k~~~~----~  134 (350)
T d1xgka_          82 QA-------------GDEIAIGKDLADAAKR--AGTIQHYIYSSMPD--HSLY------GPWPAVPMWAPKFTVE----N  134 (350)
T ss_dssp             TT-------------SCHHHHHHHHHHHHHH--HSCCSEEEEEECCC--GGGT------SSCCCCTTTHHHHHHH----H
T ss_pred             cc-------------chhhhhhhHHHHHHHH--hCCCceEEEeeccc--cccC------CcccchhhhhhHHHHH----H
Confidence            10             1355667889999998  78889989888654  2111      0111122234443332    2


Q ss_pred             hccCCCCeEEEEEecEEEeCCCCcccchHHHHHHHhCCC----CCCCCcceecccH-HHHHHHHHHHHhCCC---CCCce
Q 018503          207 LKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGP----LGSGQQWFSWIHL-DDIVNLIYEALSNPS---YRGVI  278 (355)
Q Consensus       207 ~~~~~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~i~v-~Dva~~~~~~~~~~~---~~~~~  278 (355)
                      +....+++++++||+.+++.................+..    ...++..+.++++ +|+++++..++..+.   .+..|
T Consensus       135 ~~~~~~~~~~~vr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Dva~~v~~~l~~~~~~~~G~~~  214 (350)
T d1xgka_         135 YVRQLGLPSTFVYAGIYNNNFTSLPYPLFQMELMPDGTFEWHAPFDPDIPLPWLDAEHDVGPALLQIFKDGPQKWNGHRI  214 (350)
T ss_dssp             HHHTSSSCEEEEEECEEGGGCBSSSCSSCBEEECTTSCEEEEESSCTTSCEEEECHHHHHHHHHHHHHHHCHHHHTTCEE
T ss_pred             HHHhhccCceeeeeceeeccccccccccccccccccccceeeecccCCCcceEEEeHHHHHHHHHHHHhCChhhcCCeEE
Confidence            333457999999999998754221111000000011111    1456777888886 799999999997543   35578


Q ss_pred             EecCCCccCHHHHHHHHHHHhCCC-CCCCCc
Q 018503          279 NGTAPNPVRLAEMCDHLGNVLGRP-SWLPVP  308 (355)
Q Consensus       279 ~i~~~~~~s~~el~~~i~~~~g~~-~~~~~~  308 (355)
                      ++++ +.+|+.|+++.+++++|++ ..+++|
T Consensus       215 ~~~g-~~~T~~eia~~l~~~~G~~v~~~~vp  244 (350)
T d1xgka_         215 ALTF-ETLSPVQVCAAFSRALNRRVTYVQVP  244 (350)
T ss_dssp             EECS-EEECHHHHHHHHHHHHTSCEEEEECS
T ss_pred             EEeC-CcCCHHHHHHHHHHHHCCcceEEECC
Confidence            8876 5699999999999999987 333444

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.77  E-value=1.6e-18  Score=145.20  Aligned_cols=218  Identities=18%  Similarity=0.143  Sum_probs=148.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcC---CCcEEEECCC
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ---GSTAVVNLAG  125 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~---~~d~vi~~a~  125 (355)
                      ++|++|||||++.||+++++.|+++|++|++++|+.+................+|+.|+++++++++   ++|++||+||
T Consensus         6 ~GK~~lITGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~g~iDilVnnAg   85 (244)
T d1pr9a_           6 AGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPGIEPVCVDLGDWEATERALGSVGPVDLLVNNAA   85 (244)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTCCCCCEEEECCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHhcCCCeEEEEeCCCHHHHHHHHHHhCCceEEEeccc
Confidence            5689999999999999999999999999999999987655432211111134579999998888775   6799999999


Q ss_pred             CCCC---CCCChhhHHHHHHHhhhhHHHHHHHHHc-C--CCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCChh-HHHH
Q 018503          126 TPIG---TRWSSEIKKEIKESRIRVTSKVVDLINE-S--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-LAEV  198 (355)
Q Consensus       126 ~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~~~-~--~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~~y-~~k~  198 (355)
                      ....   ...+.+++...+++|+.++..+.+++.. .  +....++|++||...  ...         .+....| .+|.
T Consensus        86 ~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~--~~~---------~~~~~~Y~asKa  154 (244)
T d1pr9a_          86 VALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCS--QRA---------VTNHSVYCSTKG  154 (244)
T ss_dssp             CCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGG--TSC---------CTTBHHHHHHHH
T ss_pred             cccccchhhhhHHHHHHHHHHhhhhhhHHHHHhhhHHHHhCCcceEeecccccc--ccc---------ccchhhhhhhHH
Confidence            8543   3456788899999999998887775532 1  135568999999765  211         1223457 7776


Q ss_pred             HHHHHHHHhcc---CCCCeEEEEEecEEEeCCCCc-ccchHHHHHHHhCCCCCCCCcceecccHHHHHHHHHHHHhCCC-
Q 018503          199 CREWEGTALKV---NKDVRLALIRIGIVLGKDGGA-LAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPS-  273 (355)
Q Consensus       199 ~~~~~~~~~~~---~~~~~~~i~Rp~~i~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~-  273 (355)
                      ....+.+.+..   ..|+++..|.||.+..+.... .......-......|++      .+...+|+|++++.++.... 
T Consensus       155 al~~lt~~lA~el~~~gIrvN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~pl~------R~~~peevA~~v~fL~S~~a~  228 (244)
T d1pr9a_         155 ALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATWSDPHKAKTMLNRIPLG------KFAEVEHVVNAILFLLSDRSG  228 (244)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHHTTSCSHHHHHHHHTTCTTC------SCBCHHHHHHHHHHHHSGGGT
T ss_pred             HHHHHHHHHHHHhCCCcEEEEEEeeCcCcChHHhhhccChHHHHHHHhcCCCC------CCcCHHHHHHHHHHHhCchhC
Confidence            66555554433   348999999999987653111 11111111222333332      36789999999999997543 


Q ss_pred             --CCCceEecCC
Q 018503          274 --YRGVINGTAP  283 (355)
Q Consensus       274 --~~~~~~i~~~  283 (355)
                        .+..+.+.+|
T Consensus       229 ~itG~~i~vDGG  240 (244)
T d1pr9a_         229 MTTGSTLPVEGG  240 (244)
T ss_dssp             TCCSCEEEESTT
T ss_pred             CcCCcEEEECcc
Confidence              3446777665

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.76  E-value=2.3e-18  Score=143.36  Aligned_cols=210  Identities=17%  Similarity=0.137  Sum_probs=143.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcC-------CCcEEE
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ-------GSTAVV  121 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-------~~d~vi  121 (355)
                      +.|++|||||++.||+++++.|++.|++|++++|+.+......       ...+|+.|+++++++++       .+|++|
T Consensus         6 ~gK~~lITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~-------~~~~Dv~~~~~v~~~~~~~~~~~g~iDiLV   78 (237)
T d1uzma1           6 VSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKGLF-------GVEVDVTDSDAVDRAFTAVEEHQGPVEVLV   78 (237)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCTTSE-------EEECCTTCHHHHHHHHHHHHHHHSSCSEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcchhcCce-------EEEEecCCHHHHHHHHHHHHHhcCCceEEE
Confidence            4579999999999999999999999999999999876544322       34579999888776653       689999


Q ss_pred             ECCCCCCC---CCCChhhHHHHHHHhhhhHHHHHHHHHcC--CCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCChh-H
Q 018503          122 NLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-L  195 (355)
Q Consensus       122 ~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~~y-~  195 (355)
                      ||||....   .+.+.+.++..+++|+.++..+.+++...  ..+..++|++||.... .+          .+....| .
T Consensus        79 nnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Iv~isS~~~~-~~----------~~~~~~Y~a  147 (237)
T d1uzma1          79 SNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGL-WG----------IGNQANYAA  147 (237)
T ss_dssp             EECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC----------------CCHHHHH
T ss_pred             eeecccccccHhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccCCCceEEEcchhhc-cC----------CcccHHHHH
Confidence            99997543   34467888999999999987776644321  1466689999997662 12          1234567 7


Q ss_pred             HHHHHHHHHHHhcc---CCCCeEEEEEecEEEeCCCCcccchHHHHHHHhCCCCCCCCcceecccHHHHHHHHHHHHhCC
Q 018503          196 AEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNP  272 (355)
Q Consensus       196 ~k~~~~~~~~~~~~---~~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~  272 (355)
                      +|...+.+.+.+..   .+|+++..+.||.+..+.......... -......|++      .+...+|+|++++.++...
T Consensus       148 sKaal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~~~-~~~~~~~pl~------R~~~pedvA~~v~fL~S~~  220 (237)
T d1uzma1         148 SKAGVIGMARSIARELSKANVTANVVAPGYIDTDMTRALDERIQ-QGALQFIPAK------RVGTPAEVAGVVSFLASED  220 (237)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHSCHHHH-HHHGGGCTTC------SCBCHHHHHHHHHHHHSGG
T ss_pred             HHHHHHHHHHHHHhhhhcCCceeeeeeeCcCCChhhhccCHHHH-HHHHhcCCCC------CCcCHHHHHHHHHHHhCch
Confidence            78766655554433   358999999999986543111111000 0111222222      3678999999999999754


Q ss_pred             C---CCCceEecCC
Q 018503          273 S---YRGVINGTAP  283 (355)
Q Consensus       273 ~---~~~~~~i~~~  283 (355)
                      .   .+..+.+.+|
T Consensus       221 s~~itG~~i~vdGG  234 (237)
T d1uzma1         221 ASYISGAVIPVDGG  234 (237)
T ss_dssp             GTTCCSCEEEESTT
T ss_pred             hcCCcCCeEEECCC
Confidence            3   3447777766

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.75  E-value=2.2e-18  Score=143.97  Aligned_cols=217  Identities=21%  Similarity=0.137  Sum_probs=147.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcC---CCcEEEECCC
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ---GSTAVVNLAG  125 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~---~~d~vi~~a~  125 (355)
                      ++|++|||||++.||+++++.|+++|++|++++|+.+................+|+.|+++++++++   ++|++|||||
T Consensus         4 ~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~g~iDilVnnAg   83 (242)
T d1cyda_           4 SGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPGIEPVCVDLGDWDATEKALGGIGPVDLLVNNAA   83 (242)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTCCCCSEEEECCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhcCCCeEEEEeCCCHHHHHHHHHHcCCCeEEEECCc
Confidence            3589999999999999999999999999999999977654432221111134579999998888876   6799999999


Q ss_pred             CCCC---CCCChhhHHHHHHHhhhhHHHHHHHHHc-C--CCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCChh-HHHH
Q 018503          126 TPIG---TRWSSEIKKEIKESRIRVTSKVVDLINE-S--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-LAEV  198 (355)
Q Consensus       126 ~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~~~-~--~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~~y-~~k~  198 (355)
                      ....   ...+.+.++..+++|+.++..+.+++.. +  +....++|++||...  +..         .+....| .+|.
T Consensus        84 ~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~--~~~---------~~~~~~Y~asKa  152 (242)
T d1cyda_          84 LVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVA--HVT---------FPNLITYSSTKG  152 (242)
T ss_dssp             CCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGG--TSC---------CTTBHHHHHHHH
T ss_pred             cccchhHHHHHHHHHHHHHHHHhccchHHHHHhchhhhhhcccCcccccchhhc--ccc---------CCccccccchHH
Confidence            7543   3446777889999999998888775432 1  134568999998765  221         2223567 7776


Q ss_pred             HHHHHHHHhcc---CCCCeEEEEEecEEEeCCCCcc---cchHHHHHHHhCCCCCCCCcceecccHHHHHHHHHHHHhCC
Q 018503          199 CREWEGTALKV---NKDVRLALIRIGIVLGKDGGAL---AKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNP  272 (355)
Q Consensus       199 ~~~~~~~~~~~---~~~~~~~i~Rp~~i~G~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~  272 (355)
                      ....+.+.+..   .+|+++..+.||.+..+.....   .....  ......|++      .+...+|+|++++.++...
T Consensus       153 al~~lt~~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~--~~~~~~pl~------R~~~peeva~~v~fL~S~~  224 (242)
T d1cyda_         153 AMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKVSADPEFAR--KLKERHPLR------KFAEVEDVVNSILFLLSDR  224 (242)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHHHHTCCHHHHH--HHHHHSTTS------SCBCHHHHHHHHHHHHSGG
T ss_pred             HHHHHHHHHHHHhCccCeecccCCCCCccCHHHHhhcCCHHHHH--HHHhcCCCC------CCcCHHHHHHHHHHHhCch
Confidence            66655554433   3589999999998865421110   01111  112222222      3678999999999998754


Q ss_pred             C---CCCceEecCCC
Q 018503          273 S---YRGVINGTAPN  284 (355)
Q Consensus       273 ~---~~~~~~i~~~~  284 (355)
                      .   .+..+.+.+|.
T Consensus       225 s~~itG~~i~vDGG~  239 (242)
T d1cyda_         225 SASTSGGGILVDAGY  239 (242)
T ss_dssp             GTTCCSSEEEESTTG
T ss_pred             hcCcCCceEEeCcch
Confidence            3   44477777663

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.75  E-value=2.7e-18  Score=143.39  Aligned_cols=213  Identities=12%  Similarity=0.071  Sum_probs=147.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCC-CccCCCeeecCCcchhhhc-------CCCcEE
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKK-TRFFPGVMIAEEPQWRDCI-------QGSTAV  120 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~d~~~~~~~~~~~-------~~~d~v  120 (355)
                      +.++++||||++.||+++++.|+++|++|++.+|++++.+....... ......+|+.|++++++++       ..+|++
T Consensus         5 ~gK~alITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~idil   84 (244)
T d1nffa_           5 TGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADAARYVHLDVTQPAQWKAAVDTAVTAFGGLHVL   84 (244)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhCcceEEEeecCCHHHHHHHHHHHHHHhCCCeEE
Confidence            35799999999999999999999999999999999876554322111 1113457999988877665       368999


Q ss_pred             EECCCCCCC---CCCChhhHHHHHHHhhhhHHHHHHHHHc-C-CCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCChh-
Q 018503          121 VNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINE-S-PEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-  194 (355)
Q Consensus       121 i~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~~~-~-~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~~y-  194 (355)
                      ||+||....   .+.+.+.++..+++|+.++..+.+++.. + +.+..++|++||...  +..         .+....| 
T Consensus        85 innAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~--~~~---------~~~~~~Y~  153 (244)
T d1nffa_          85 VNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEG--LAG---------TVACHGYT  153 (244)
T ss_dssp             EECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGG--TSC---------CTTBHHHH
T ss_pred             EECCcccCCCchhhCCHHHHhHHhhcccchhhHHHHHHHhHHHhcCcceEEecccccc--ccc---------cccccchh
Confidence            999998543   3446688899999999998888775532 1 135568999999865  211         1224567 


Q ss_pred             HHHHHHHHHHHHhcc---CCCCeEEEEEecEEEeCCCCcccchHHHHHHHhCCCCCCCCcceecccHHHHHHHHHHHHhC
Q 018503          195 LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSN  271 (355)
Q Consensus       195 ~~k~~~~~~~~~~~~---~~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~  271 (355)
                      .+|.....+.+.+..   .+|+++..|.||.+..+........      ....+      ...+...+|+|++++.++..
T Consensus       154 asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~------~~~~p------l~R~~~p~diA~~v~fL~s~  221 (244)
T d1nffa_         154 ATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMTDWVPED------IFQTA------LGRAAEPVEVSNLVVYLASD  221 (244)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSGGGTTSCTT------CSCCS------SSSCBCHHHHHHHHHHHHSG
T ss_pred             hHHHHHHHHHHHHHHHhcccCEEEEEEeeCCccChhHhhhhHH------HHhcc------ccCCCCHHHHHHHHHHHhCh
Confidence            777766665554443   3589999999998876532111000      01111      12378899999999999975


Q ss_pred             CC---CCCceEecCCC
Q 018503          272 PS---YRGVINGTAPN  284 (355)
Q Consensus       272 ~~---~~~~~~i~~~~  284 (355)
                      ..   .+..+.+.+|.
T Consensus       222 ~s~~itG~~i~vDGG~  237 (244)
T d1nffa_         222 ESSYSTGAEFVVDGGT  237 (244)
T ss_dssp             GGTTCCSCEEEESTTG
T ss_pred             hhCCCcCCEEEECCCe
Confidence            43   34477777764

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.75  E-value=1.9e-17  Score=138.24  Aligned_cols=217  Identities=14%  Similarity=0.075  Sum_probs=148.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcC-------CCcEEE
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ-------GSTAVV  121 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-------~~d~vi  121 (355)
                      +.++++||||++.||+++++.|+++|++|++.+|+.++.......... ....+|+.|+++++++++       .+|++|
T Consensus         4 ~gK~~lITGas~GIG~aia~~l~~~G~~V~~~~r~~~~l~~~~~~~~~-~~~~~Dv~~~~~v~~~~~~~~~~~g~iDilV   82 (242)
T d1ulsa_           4 KDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVGA-HPVVMDVADPASVERGFAEALAHLGRLDGVV   82 (242)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTTC-EEEECCTTCHHHHHHHHHHHHHHHSSCCEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCC-eEEEEecCCHHHHHHHHHHHHHhcCCceEEE
Confidence            357899999999999999999999999999999998765544332211 134579999988876663       689999


Q ss_pred             ECCCCCCC---CCCChhhHHHHHHHhhhhHHHHHHHHHcC--CCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCChh-H
Q 018503          122 NLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-L  195 (355)
Q Consensus       122 ~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~~y-~  195 (355)
                      ||||....   ...+.+.+...+++|+.++..+.+++...  +.+...++++||...  .+          .+....| .
T Consensus        83 nnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~~~i~~~ss~~~--~~----------~~~~~~Y~a  150 (242)
T d1ulsa_          83 HYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASRVY--LG----------NLGQANYAA  150 (242)
T ss_dssp             ECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCGGG--GC----------CTTCHHHHH
T ss_pred             ECCcccccCchhhCcchhhhccccccchhhhhhhhhccccccccccceeeeeccccc--cC----------CCCCcchHH
Confidence            99997543   34567788999999999998888776442  234555666665432  22          2234568 7


Q ss_pred             HHHHHHHHHHHhcc---CCCCeEEEEEecEEEeCCCCcccchHHHHHHHhCCCCCCCCcceecccHHHHHHHHHHHHhCC
Q 018503          196 AEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNP  272 (355)
Q Consensus       196 ~k~~~~~~~~~~~~---~~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~  272 (355)
                      +|.....+.+.+..   .+|+++..+.||.+-.+.......... -......|++      .+...+|+|++++.++...
T Consensus       151 sKaal~~ltk~lA~ela~~gIrVN~I~PG~v~T~~~~~~~~~~~-~~~~~~~pl~------R~~~pedia~~v~fL~S~~  223 (242)
T d1ulsa_         151 SMAGVVGLTRTLALELGRWGIRVNTLAPGFIETRMTAKVPEKVR-EKAIAATPLG------RAGKPLEVAYAALFLLSDE  223 (242)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTSSSCHHHH-HHHHHTCTTC------SCBCHHHHHHHHHHHHSGG
T ss_pred             HHHHHHHHHHHHHHHHhhhCcEEEEEeeCcccChhhhcCCHHHH-HHHHhcCCCC------CCCCHHHHHHHHHHHhchh
Confidence            77666555554433   348999999999997765432211111 1222333332      2678899999999999754


Q ss_pred             C---CCCceEecCCCc
Q 018503          273 S---YRGVINGTAPNP  285 (355)
Q Consensus       273 ~---~~~~~~i~~~~~  285 (355)
                      .   .+..+.+.+|..
T Consensus       224 s~~itG~~i~vDGG~t  239 (242)
T d1ulsa_         224 SSFITGQVLFVDGGRT  239 (242)
T ss_dssp             GTTCCSCEEEESTTTT
T ss_pred             hCCCCCcEEEECCCcc
Confidence            3   445777777653

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.74  E-value=5.6e-18  Score=142.02  Aligned_cols=220  Identities=15%  Similarity=0.060  Sum_probs=148.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcC-------CCcEEE
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ-------GSTAVV  121 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-------~~d~vi  121 (355)
                      +.|+++||||++.||+++++.|+++|++|++.+|+.+....+...........+|+.|+++++++++       ++|++|
T Consensus         5 ~GK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~iDilV   84 (250)
T d1ydea1           5 AGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELPGAVFILCDVTQEDDVKTLVSETIRRFGRLDCVV   84 (250)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhcCCCeEEEccCCCHHHHHHHHHHHHHhcCCCCEEE
Confidence            3579999999999999999999999999999999987655443322222245679999888776663       689999


Q ss_pred             ECCCCCCC----CCCChhhHHHHHHHhhhhHHHHHHHHHcC-CCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCChh-H
Q 018503          122 NLAGTPIG----TRWSSEIKKEIKESRIRVTSKVVDLINES-PEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-L  195 (355)
Q Consensus       122 ~~a~~~~~----~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~~y-~  195 (355)
                      |+||....    .+.+.+.++..+++|+.++..+.+++... ..+..++|++||.... .+          .+....| .
T Consensus        85 nnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~G~Ii~isS~~~~-~~----------~~~~~~Y~a  153 (250)
T d1ydea1          85 NNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQGNVINISSLVGA-IG----------QAQAVPYVA  153 (250)
T ss_dssp             ECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCHHHH-HC----------CTTCHHHHH
T ss_pred             ecccccccccccccccHHHHHHHHHHhhhhHHHHHHHhhHHHHhCCCCCccccccccc-cc----------ccCcchhHH
Confidence            99996422    23466778999999999988888766431 1133689999998652 11          2234567 7


Q ss_pred             HHHHHHHHHHHhcc---CCCCeEEEEEecEEEeCCCCc----ccchHHHH-HHHhCCCCCCCCcceecccHHHHHHHHHH
Q 018503          196 AEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGA----LAKMIPLF-MMFAGGPLGSGQQWFSWIHLDDIVNLIYE  267 (355)
Q Consensus       196 ~k~~~~~~~~~~~~---~~~~~~~i~Rp~~i~G~~~~~----~~~~~~~~-~~~~~~~~~~~~~~~~~i~v~Dva~~~~~  267 (355)
                      +|.....+.+.+..   .+|+++..|.||.+..+....    .......+ +.....|++      .+...+|+|++++.
T Consensus       154 sKaal~~lt~~lA~e~a~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~pl~------R~g~p~eva~~v~f  227 (250)
T d1ydea1         154 TKGAVTAMTKALALDESPYGVRVNCISPGNIWTPLWEELAALMPDPRASIREGMLAQPLG------RMGQPAEVGAAAVF  227 (250)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHHHTTSSSHHHHHHHHHHTSTTS------SCBCHHHHHHHHHH
T ss_pred             HHhhHHHHHHHHHHHhcccCeEEEEEeeCCCCChhHHHHhhcCCCHHHHHHHHHhcCCCC------CCCCHHHHHHHHHH
Confidence            77666555544433   348999999999886542100    00011111 222233332      36789999999999


Q ss_pred             HHhCCC--CCCceEecCCCc
Q 018503          268 ALSNPS--YRGVINGTAPNP  285 (355)
Q Consensus       268 ~~~~~~--~~~~~~i~~~~~  285 (355)
                      ++....  .+..+.+.+|..
T Consensus       228 L~Sda~~itG~~i~vDGG~~  247 (250)
T d1ydea1         228 LASEANFCTGIELLVTGGAE  247 (250)
T ss_dssp             HHHHCTTCCSCEEEESTTTT
T ss_pred             HhCccCCCcCCeEEECCCcc
Confidence            986433  444777777653

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

Probab=99.74  E-value=5e-18  Score=142.26  Aligned_cols=216  Identities=13%  Similarity=0.021  Sum_probs=145.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhc-------CCCcEEE
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCI-------QGSTAVV  121 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~-------~~~d~vi  121 (355)
                      ++|++|||||++.||+++++.|+++|++|++.+|+.+..+.......  ....+|+.|++++++++       .++|++|
T Consensus         4 ~GK~alITGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~--~~~~~Dv~~~~~v~~~~~~~~~~~G~iDiLV   81 (248)
T d2d1ya1           4 AGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGKEVAEAIGG--AFFQVDLEDERERVRFVEEAAYALGRVDVLV   81 (248)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTHHHHHHHHTC--EEEECCTTCHHHHHHHHHHHHHHHSCCCEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCC--eEEEEeCCCHHHHHHHHHHHHHhcCCCCeEE
Confidence            35799999999999999999999999999999998765432211100  13457999988776665       3689999


Q ss_pred             ECCCCCCC---CCCChhhHHHHHHHhhhhHHHHHHHHHcC--CCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCChh-H
Q 018503          122 NLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-L  195 (355)
Q Consensus       122 ~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~~y-~  195 (355)
                      |+||....   .+.+.++++..+++|+.++..+.+++...  +.+..++|++||...  +..         .+....| .
T Consensus        82 nnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Ii~isS~~~--~~~---------~~~~~~Y~a  150 (248)
T d2d1ya1          82 NNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQG--LFA---------EQENAAYNA  150 (248)
T ss_dssp             ECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGG--TSB---------CTTBHHHHH
T ss_pred             EeCcCCCCCChhhCCHHHHHHHHHhhhhhHhhhhhhhcccccccccccccccccccc--ccc---------ccccchhHH
Confidence            99997543   34466788899999999988888776432  245678999999865  211         1234567 7


Q ss_pred             HHHHHHHHHHHhcc---CCCCeEEEEEecEEEeCCCCc-------ccchHHHHHHHhCCCCCCCCcceecccHHHHHHHH
Q 018503          196 AEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGA-------LAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLI  265 (355)
Q Consensus       196 ~k~~~~~~~~~~~~---~~~~~~~i~Rp~~i~G~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~  265 (355)
                      +|.....+.+.+..   .+|+++..+.||.+-.+....       ......  ......++      ..+...+|+|+++
T Consensus       151 sKaal~~ltk~lA~el~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~--~~~~~~pl------~R~~~pedia~~v  222 (248)
T d2d1ya1         151 SKGGLVNLTRSLALDLAPLRIRVNAVAPGAIATEAVLEAIALSPDPERTRR--DWEDLHAL------RRLGKPEEVAEAV  222 (248)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHC--------CH--HHHTTSTT------SSCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhhhCcEEEEEeeCCCCCchHHHHhhcCCCHHHHHH--HHHhcCCC------CCCcCHHHHHHHH
Confidence            77666655544433   258999999999886542100       000000  01111121      2367899999999


Q ss_pred             HHHHhCCC---CCCceEecCCCc
Q 018503          266 YEALSNPS---YRGVINGTAPNP  285 (355)
Q Consensus       266 ~~~~~~~~---~~~~~~i~~~~~  285 (355)
                      +.++....   .+..+.+.+|-.
T Consensus       223 ~fL~S~~s~~itG~~i~vDGG~t  245 (248)
T d2d1ya1         223 LFLASEKASFITGAILPVDGGMT  245 (248)
T ss_dssp             HHHHSGGGTTCCSCEEEESTTGG
T ss_pred             HHHhCchhcCCCCcEEEcCcCcc
Confidence            99987543   444788877753

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

Probab=99.73  E-value=2.7e-17  Score=138.83  Aligned_cols=220  Identities=13%  Similarity=0.001  Sum_probs=145.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCch-hhcc----CCCCCCccCCCeeecCCcchhhhcC-------C
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSK-AELI----FPGKKTRFFPGVMIAEEPQWRDCIQ-------G  116 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~-~~~~----~~~~~~~~~~~~d~~~~~~~~~~~~-------~  116 (355)
                      +.|+++||||++.||+++++.|+++|++|++.+|+.+. .+..    ...........+|+.|+++++++++       +
T Consensus         6 ~gK~alITGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~G~   85 (261)
T d1geea_           6 EGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEFGK   85 (261)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            46899999999999999999999999999999998653 2211    1111111234579999888776663       6


Q ss_pred             CcEEEECCCCCCC---CCCChhhHHHHHHHhhhhHHHHHHHHHc-C-CCC-CCcEEEEeeeeeeeeCCCCCccccCCCCC
Q 018503          117 STAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINE-S-PEG-VRPSVLVSATALGYYGTSETEVFDESSPS  190 (355)
Q Consensus       117 ~d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~~~-~-~~~-~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~  190 (355)
                      +|++||+||....   .+.+.+++...+++|+.++..+.+++.. + +.+ ...+|++||...  ..         ..+.
T Consensus        86 iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~~Iv~isS~~~--~~---------~~~~  154 (261)
T d1geea_          86 LDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHE--KI---------PWPL  154 (261)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGG--TS---------CCTT
T ss_pred             CCEeeccceecCCcchhhcCHHHHHHHHHHhcccchhHHHHHhhhhccccccccccccccchh--cc---------cCcc
Confidence            8999999998543   3456788899999999998888766532 1 133 335888888754  21         1223


Q ss_pred             CChh-HHHHHHHHHHHHhcc---CCCCeEEEEEecEEEeCCCCcccchHHHH-HHHhCCCCCCCCcceecccHHHHHHHH
Q 018503          191 GNDY-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALAKMIPLF-MMFAGGPLGSGQQWFSWIHLDDIVNLI  265 (355)
Q Consensus       191 ~~~y-~~k~~~~~~~~~~~~---~~~~~~~i~Rp~~i~G~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~v~Dva~~~  265 (355)
                      ...| .+|.....+.+.+..   .+|+++..|.||.+..+.......-.... ......|++      .+...+|+|+++
T Consensus       155 ~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~pl~------R~~~pediA~~v  228 (261)
T d1geea_         155 FVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKFADPEQRADVESMIPMG------YIGEPEEIAAVA  228 (261)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGHHHHHSHHHHHHHHTTCTTS------SCBCHHHHHHHH
T ss_pred             ccccccCCccchhhHHHHHHHhhhhCcEEEEEeeCcCcCHhHhhhcCCHHHHHHHHhcCCCC------CCCCHHHHHHHH
Confidence            4567 777666555544433   34899999999998765321100000111 122222322      267889999999


Q ss_pred             HHHHhCCC---CCCceEecCCCc
Q 018503          266 YEALSNPS---YRGVINGTAPNP  285 (355)
Q Consensus       266 ~~~~~~~~---~~~~~~i~~~~~  285 (355)
                      +.++....   .+..+.+.+|..
T Consensus       229 ~fL~S~~s~~itG~~i~vDGG~s  251 (261)
T d1geea_         229 AWLASSEASYVTGITLFADGGMT  251 (261)
T ss_dssp             HHHHSGGGTTCCSCEEEESTTGG
T ss_pred             HHHhCchhcCCcCCeEEECCCee
Confidence            99997543   455788877753

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=99.73  E-value=1.7e-17  Score=139.29  Aligned_cols=220  Identities=16%  Similarity=0.047  Sum_probs=147.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCC-----CCCccCCCeeecCCcchhhhc-------CC
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-----KKTRFFPGVMIAEEPQWRDCI-------QG  116 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-----~~~~~~~~~d~~~~~~~~~~~-------~~  116 (355)
                      +.++++||||++.||+++++.|+++|++|++.+|+.++.......     ........+|+.|++++++++       .+
T Consensus         4 ~gK~~lITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   83 (251)
T d1vl8a_           4 RGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEKFGK   83 (251)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            457999999999999999999999999999999987664332111     111113457999988777665       36


Q ss_pred             CcEEEECCCCCCC---CCCChhhHHHHHHHhhhhHHHHHHHHHcC--CCCCCcEEEEeeeeeeeeCCCCCccccCCCCCC
Q 018503          117 STAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSG  191 (355)
Q Consensus       117 ~d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~  191 (355)
                      +|++||+||....   .+.+.+.+...+++|+.++..+.+++...  ..+..++|+++|.... ...         .+..
T Consensus        84 iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~i~S~~~~-~~~---------~~~~  153 (251)
T d1vl8a_          84 LDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVE-EVT---------MPNI  153 (251)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGT-CCC---------SSSC
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccccccccccccchhc-ccc---------Cccc
Confidence            8999999997533   34467888999999999988888765432  2456689999886531 110         1123


Q ss_pred             Chh-HHHHHHHHHHHHhcc---CCCCeEEEEEecEEEeCCCCcccchHHHH-HHHhCCCCCCCCcceecccHHHHHHHHH
Q 018503          192 NDY-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALAKMIPLF-MMFAGGPLGSGQQWFSWIHLDDIVNLIY  266 (355)
Q Consensus       192 ~~y-~~k~~~~~~~~~~~~---~~~~~~~i~Rp~~i~G~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~v~Dva~~~~  266 (355)
                      ..| .+|.....+.+.+..   .+|+++..+.||.+-.+.......-.... ......|++      .+...+|+|++++
T Consensus       154 ~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~pl~------R~~~pedvA~~v~  227 (251)
T d1vl8a_         154 SAYAASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTEAVFSDPEKLDYMLKRIPLG------RTGVPEDLKGVAV  227 (251)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTHHHHTCHHHHHHHHHTCTTS------SCBCGGGGHHHHH
T ss_pred             cchHHHHHhHHHHHHHHHHHhcccCeEEEEEeeCcccCHHHHhccCCHHHHHHHHhcCCCC------CCCCHHHHHHHHH
Confidence            457 777666555544433   35899999999999766432111001111 222333332      2567899999999


Q ss_pred             HHHhCCC---CCCceEecCCC
Q 018503          267 EALSNPS---YRGVINGTAPN  284 (355)
Q Consensus       267 ~~~~~~~---~~~~~~i~~~~  284 (355)
                      .++....   .+..+.+.+|.
T Consensus       228 fL~S~~a~~itG~~i~vDGG~  248 (251)
T d1vl8a_         228 FLASEEAKYVTGQIIFVDGGW  248 (251)
T ss_dssp             HHHSGGGTTCCSCEEEESTTG
T ss_pred             HHhCchhCCCcCcEEEeCcCe
Confidence            9987543   34477777663

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

Probab=99.73  E-value=2.6e-17  Score=138.21  Aligned_cols=218  Identities=15%  Similarity=0.080  Sum_probs=144.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCC---CCCCccCCCeeecCCcchhhhc-------CCCc
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP---GKKTRFFPGVMIAEEPQWRDCI-------QGST  118 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~---~~~~~~~~~~d~~~~~~~~~~~-------~~~d  118 (355)
                      +.++++||||++.||+++++.|++.|++|++.+|+.+..+....   .........+|+.|++++.+++       .++|
T Consensus         5 ~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iD   84 (251)
T d1zk4a1           5 DGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAFGPVS   84 (251)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSSCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCCcEEEEEccCCCHHHHHHHHHHHHHHhCCce
Confidence            45799999999999999999999999999999998765443211   1111123457899988777655       3689


Q ss_pred             EEEECCCCCCC---CCCChhhHHHHHHHhhhhHHHHHHHHHc-C-CCCC-CcEEEEeeeeeeeeCCCCCccccCCCCCCC
Q 018503          119 AVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINE-S-PEGV-RPSVLVSATALGYYGTSETEVFDESSPSGN  192 (355)
Q Consensus       119 ~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~~~-~-~~~~-~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~  192 (355)
                      ++||+||....   .+.+.+++...+++|+.++..+.+++.. + ..+. .++|++||...  +-         ..+...
T Consensus        85 iLVnnAg~~~~~~~~~~~~~~~~~~~~vnl~g~~~~~~~~~~~m~~~~~gg~Ii~isS~~~--~~---------~~~~~~  153 (251)
T d1zk4a1          85 TLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEG--FV---------GDPSLG  153 (251)
T ss_dssp             EEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGG--TS---------CCTTCH
T ss_pred             EEEeccccccccchhcccccchhhhccccccccchhHHHHHHHHHhcCCCCceEeeeccce--ec---------cCCCch
Confidence            99999998533   3456777889999999999888877543 1 1333 47899998764  21         122345


Q ss_pred             hh-HHHHHHHHHHHHhc-----cCCCCeEEEEEecEEEeCCCCcccchHHHHHHHhCCCCCCCCcceecccHHHHHHHHH
Q 018503          193 DY-LAEVCREWEGTALK-----VNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIY  266 (355)
Q Consensus       193 ~y-~~k~~~~~~~~~~~-----~~~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~  266 (355)
                      .| .+|.....+.+.+.     ..+|+++..|.||.+..+.......--.........|+      ..+...+|+|++++
T Consensus       154 ~Y~asKaal~~lt~~lA~e~~l~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~pl------~R~~~pedvA~~v~  227 (251)
T d1zk4a1         154 AYNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDLPGAEEAMSQRTKTPM------GHIGEPNDIAYICV  227 (251)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHTSTTHHHHHTSTTTCTT------SSCBCHHHHHHHHH
T ss_pred             hHHHHHHHHhcchHHHHHHHhcCCCcEEEEEEeCCCCCChhHHhcCCHHHHHHHHhCCCC------CCCcCHHHHHHHHH
Confidence            67 77766555444322     35689999999998865421111000000011111111      23678999999999


Q ss_pred             HHHhCCC---CCCceEecCC
Q 018503          267 EALSNPS---YRGVINGTAP  283 (355)
Q Consensus       267 ~~~~~~~---~~~~~~i~~~  283 (355)
                      .++....   .+..+.+.+|
T Consensus       228 fL~S~~s~~itG~~i~vDGG  247 (251)
T d1zk4a1         228 YLASNESKFATGSEFVVDGG  247 (251)
T ss_dssp             HHHSGGGTTCCSCEEEESTT
T ss_pred             HHhCchhCCCcCcEEEECcc
Confidence            9997543   3447777666

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=99.72  E-value=4.1e-17  Score=135.69  Aligned_cols=214  Identities=14%  Similarity=0.030  Sum_probs=140.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCC-cchhhhcCCCcEEEECCCCC
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEE-PQWRDCIQGSTAVVNLAGTP  127 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~-~~~~~~~~~~d~vi~~a~~~  127 (355)
                      +.|++|||||++.||+++++.|+++|++|++.+|+.+........     +..+|+.+. +.+.+.+.++|++||+||..
T Consensus         3 kgK~~lVTGas~GIG~aia~~l~~~Ga~V~~~~r~~~~l~~~~~~-----~~~~Dv~~~~~~~~~~~g~iD~lVnnAG~~   77 (234)
T d1o5ia_           3 RDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKRSGHR-----YVVCDLRKDLDLLFEKVKEVDILVLNAGGP   77 (234)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHTCSE-----EEECCTTTCHHHHHHHSCCCSEEEECCCCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHhcCCc-----EEEcchHHHHHHHHHHhCCCcEEEeccccc
Confidence            357999999999999999999999999999999987665543322     333566542 34445556899999999975


Q ss_pred             CC---CCCChhhHHHHHHHhhhhHHHHHHHHHcC--CCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCChh-HHHHHHH
Q 018503          128 IG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-LAEVCRE  201 (355)
Q Consensus       128 ~~---~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~~y-~~k~~~~  201 (355)
                      ..   .+.+.+.+...+++|+.++..+.+++...  ..+..++|+++|...  ...         .+....| .+|....
T Consensus        78 ~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~G~ii~i~S~~~--~~~---------~~~~~~Y~asKaal~  146 (234)
T d1o5ia_          78 KAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSV--ISP---------IENLYTSNSARMALT  146 (234)
T ss_dssp             CCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGG--TSC---------CTTBHHHHHHHHHHH
T ss_pred             CCcchhhhhhHHHHHHhhhhhhhhhhhhhcccccccccccccccccccccc--ccc---------ccccccchhHHHHHH
Confidence            43   34567778899999999987777655321  135568999988765  221         1223356 6676555


Q ss_pred             HHHHHhcc---CCCCeEEEEEecEEEeCCCCcccchHHHHHHHhCCCCCCCCcceecccHHHHHHHHHHHHhCCC---CC
Q 018503          202 WEGTALKV---NKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPS---YR  275 (355)
Q Consensus       202 ~~~~~~~~---~~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~---~~  275 (355)
                      .+.+.+..   .+|+++..+.||.+..+.......-...-......|++      .+...+|+|++++.++....   .+
T Consensus       147 ~ltk~lA~ela~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~pl~------R~~~pediA~~v~fL~S~~s~~itG  220 (234)
T d1o5ia_         147 GFLKTLSFEVAPYGITVNCVAPGWTETERVKELLSEEKKKQVESQIPMR------RMAKPEEIASVVAFLCSEKASYLTG  220 (234)
T ss_dssp             HHHHHHHHHHGGGTEEEEEEEECSBCCTTHHHHSCHHHHHHHHTTSTTS------SCBCHHHHHHHHHHHHSGGGTTCCS
T ss_pred             HHHHHHHHHhcccCeEEeecccCccchhhhhhhcCHHHHHHHHhcCCCC------CCcCHHHHHHHHHHHhChhhcCCcC
Confidence            44444333   34899999999988765421110000001122222322      36789999999999987543   34


Q ss_pred             CceEecCCC
Q 018503          276 GVINGTAPN  284 (355)
Q Consensus       276 ~~~~i~~~~  284 (355)
                      .++.+.+|-
T Consensus       221 ~~i~vDGG~  229 (234)
T d1o5ia_         221 QTIVVDGGL  229 (234)
T ss_dssp             CEEEESTTC
T ss_pred             cEEEECccc
Confidence            577777663

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

Probab=99.72  E-value=5.3e-18  Score=141.75  Aligned_cols=217  Identities=15%  Similarity=0.082  Sum_probs=148.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCC-CccCCCeeecCCcchhhhcC-------CCcEE
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKK-TRFFPGVMIAEEPQWRDCIQ-------GSTAV  120 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~d~~~~~~~~~~~~-------~~d~v  120 (355)
                      +.++++||||++.||+++++.|+++|++|++.+|+.+..+.+..... ......+|+.|+++++++++       ++|++
T Consensus         3 ~gK~alITGas~GIG~a~a~~l~~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDil   82 (243)
T d1q7ba_           3 EGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGLMLNVTDPASIESVLEKIRAEFGEVDIL   82 (243)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHTCSCSEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCCcEEEEEecCHHHhhhhhhhhhcccCCccee
Confidence            35789999999999999999999999999999999876544322100 01134578988887766653       68999


Q ss_pred             EECCCCCCC---CCCChhhHHHHHHHhhhhHHHHHHHHHcC--CCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCChh-
Q 018503          121 VNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-  194 (355)
Q Consensus       121 i~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~~y-  194 (355)
                      ||+||....   .+...+.+...+++|+.++..+++++...  +.+..++|++||...  +..         .+....| 
T Consensus        83 VnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~II~isS~~~--~~~---------~~~~~~Y~  151 (243)
T d1q7ba_          83 VNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKRHGRIITIGSVVG--TMG---------NGGQANYA  151 (243)
T ss_dssp             EECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHH--HHC---------CTTCHHHH
T ss_pred             hhhhhhccccccccccccccccccceeechhhhhHHHHHHHHHHcCCCEeeeecchhh--cCC---------CCCCHHHH
Confidence            999997543   34466788899999999988888776331  135578999999765  211         1234568 


Q ss_pred             HHHHHHHHHHHHhcc---CCCCeEEEEEecEEEeCCCCcccchHHHH-HHHhCCCCCCCCcceecccHHHHHHHHHHHHh
Q 018503          195 LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALAKMIPLF-MMFAGGPLGSGQQWFSWIHLDDIVNLIYEALS  270 (355)
Q Consensus       195 ~~k~~~~~~~~~~~~---~~~~~~~i~Rp~~i~G~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~  270 (355)
                      .+|.....+.+.+..   .+|+++..+.||.+-.+.....  .-... ......|++      .+...+|+|++++.++.
T Consensus       152 asKaal~~lt~~lA~ela~~gIrVN~I~PG~i~T~~~~~~--~~~~~~~~~~~~pl~------R~~~pedvA~~v~fL~S  223 (243)
T d1q7ba_         152 AAKAGLIGFSKSLAREVASRGITVNVVAPGFIETDMTRAL--SDDQRAGILAQVPAG------RLGGAQEIANAVAFLAS  223 (243)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTS--CHHHHHHHHTTCTTS------SCBCHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHHHHHHhCccCeEEEEEecceEechhhhhh--hhhHHHHHHhcCCCC------CCCCHHHHHHHHHHHhC
Confidence            778766655554443   3589999999998865421111  00111 222222322      36789999999999997


Q ss_pred             CCC---CCCceEecCCC
Q 018503          271 NPS---YRGVINGTAPN  284 (355)
Q Consensus       271 ~~~---~~~~~~i~~~~  284 (355)
                      ...   .+..+.+.+|.
T Consensus       224 ~~s~~itGq~i~vdGG~  240 (243)
T d1q7ba_         224 DEAAYITGETLHVNGGM  240 (243)
T ss_dssp             GGGTTCCSCEEEESTTS
T ss_pred             chhcCCcCCeEEECCCe
Confidence            543   44577777764

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=99.72  E-value=1.8e-17  Score=139.53  Aligned_cols=217  Identities=14%  Similarity=0.096  Sum_probs=147.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccC----CCCCCccCCCeeecCCcchhhhc-------CCC
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIF----PGKKTRFFPGVMIAEEPQWRDCI-------QGS  117 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~~~~~~~~~~~d~~~~~~~~~~~-------~~~  117 (355)
                      +.++++||||++.||++++++|+++|++|++.+|+.++.....    ..........+|+.+++++++++       .++
T Consensus        10 ~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~l~~~g~~~~~~~~Dvs~~~~~~~~~~~~~~~~g~i   89 (255)
T d1fmca_          10 DGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKLGKV   89 (255)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSSC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            4579999999999999999999999999999999876544321    11111123457999988776655       368


Q ss_pred             cEEEECCCCCCCC--CCChhhHHHHHHHhhhhHHHHHHHHHcC--CCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCCh
Q 018503          118 TAVVNLAGTPIGT--RWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGND  193 (355)
Q Consensus       118 d~vi~~a~~~~~~--~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~~  193 (355)
                      |++||+||.....  +.+.+.++..+++|+.++..+.+++...  +.+..++|++||...  +..         .+....
T Consensus        90 DilvnnAG~~~~~~~e~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Ii~isS~~~--~~~---------~~~~~~  158 (255)
T d1fmca_          90 DILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAA--ENK---------NINMTS  158 (255)
T ss_dssp             CEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGG--TCC---------CTTCHH
T ss_pred             CEeeeCCcCCCCCcccCCHHHHHHHHHHHHHHhhhhHHHHHhhhccccccccccccccch--hcc---------cccccc
Confidence            9999999975432  3456778899999999988887755331  134557889988765  211         223456


Q ss_pred             h-HHHHHHHHHHHHhcc---CCCCeEEEEEecEEEeCCC-Ccc-cchHHHHHHHhCCCCCCCCcceecccHHHHHHHHHH
Q 018503          194 Y-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDG-GAL-AKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYE  267 (355)
Q Consensus       194 y-~~k~~~~~~~~~~~~---~~~~~~~i~Rp~~i~G~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~  267 (355)
                      | .+|.....+.+.++.   .+|+++..|.||.+..+.. ... .....  ......|++      .+...+|+|++++.
T Consensus       159 Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~e~~~--~~~~~~pl~------R~g~pedvA~~v~f  230 (255)
T d1fmca_         159 YASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVITPEIEQ--KMLQHTPIR------RLGQPQDIANAALF  230 (255)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCCHHHHH--HHHHTCSSC------SCBCHHHHHHHHHH
T ss_pred             chhHHHHHHHHHHHHHHHhCccCeEEEEeeeCcCcChHhhccCCHHHHH--HHHhcCCCC------CCcCHHHHHHHHHH
Confidence            7 777766655554443   3589999999999865421 111 11111  222333332      26788999999999


Q ss_pred             HHhCCC---CCCceEecCCC
Q 018503          268 ALSNPS---YRGVINGTAPN  284 (355)
Q Consensus       268 ~~~~~~---~~~~~~i~~~~  284 (355)
                      ++....   .+..+.+.+|.
T Consensus       231 L~S~~s~~itG~~i~vDGG~  250 (255)
T d1fmca_         231 LCSPAASWVSGQILTVSGGG  250 (255)
T ss_dssp             HHSGGGTTCCSCEEEESTTS
T ss_pred             HhCchhcCCcCCEEEECcCc
Confidence            997543   44577787775

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

Probab=99.72  E-value=2.4e-17  Score=138.37  Aligned_cols=217  Identities=14%  Similarity=0.068  Sum_probs=146.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCC-CccCCCeeecCCcchhhhc-------CCCcEE
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKK-TRFFPGVMIAEEPQWRDCI-------QGSTAV  120 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~d~~~~~~~~~~~-------~~~d~v  120 (355)
                      +.++++||||++.||+++++.|+++|++|++.+|+.++......... ......+|+.+++++++++       ..+|++
T Consensus         4 ~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDil   83 (254)
T d1hdca_           4 SGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDAARYQHLDVTIEEDWQRVVAYAREEFGSVDGL   83 (254)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCceEEEEcccCCHHHHHHHHHHHHHHcCCccEE
Confidence            35799999999999999999999999999999999876654432211 1124457999988887666       368999


Q ss_pred             EECCCCCCC---CCCChhhHHHHHHHhhhhHHHHHHHHHcC--CCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCChh-
Q 018503          121 VNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-  194 (355)
Q Consensus       121 i~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~~y-  194 (355)
                      ||+||....   .....+.+...+++|+.++..+.+++...  ..+..++|++||...  +..         .+....| 
T Consensus        84 VnnAg~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~~~G~II~isS~~~--~~~---------~~~~~~Y~  152 (254)
T d1hdca_          84 VNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAG--LMG---------LALTSSYG  152 (254)
T ss_dssp             EECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGG--TSC---------CTTCHHHH
T ss_pred             EecCccccccccccccccccchhhhHHhhHHHHHHHHHHHHHhhcCCCeecccccchh--ccc---------ccchhhHH
Confidence            999998543   34566778899999999988888766331  135678999999765  211         1234567 


Q ss_pred             HHHHHHHHHHHHhcc---CCCCeEEEEEecEEEeCCCCcccchHHHHHHHhCCCCCCCCcce-ec-ccHHHHHHHHHHHH
Q 018503          195 LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWF-SW-IHLDDIVNLIYEAL  269 (355)
Q Consensus       195 ~~k~~~~~~~~~~~~---~~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-i~v~Dva~~~~~~~  269 (355)
                      .+|.....+.+.+..   .+|+++..+.||.+..+.       ............. ...+. .+ +..+|+|.+++.++
T Consensus       153 asKaal~~lt~~lA~e~a~~gIrVN~I~PG~v~T~~-------~~~~~~~~~~~~~-~~~pl~R~g~~PedvA~~v~fL~  224 (254)
T d1hdca_         153 ASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTPM-------TAETGIRQGEGNY-PNTPMGRVGNEPGEIAGAVVKLL  224 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHH-------HHHHTCCCSTTSC-TTSTTSSCB-CHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhCCCceEEEEeeeCcccCcc-------chhcCHHHHHHHH-hCCCCCCCCCCHHHHHHHHHHHh
Confidence            778766665554443   348999999999886541       1111000000000 01111 12 35799999999999


Q ss_pred             hCCC---CCCceEecCCC
Q 018503          270 SNPS---YRGVINGTAPN  284 (355)
Q Consensus       270 ~~~~---~~~~~~i~~~~  284 (355)
                      ....   .+..+.+.+|.
T Consensus       225 S~~a~~itG~~i~vDGG~  242 (254)
T d1hdca_         225 SDTSSYVTGAELAVDGGW  242 (254)
T ss_dssp             SGGGTTCCSCEEEESTTT
T ss_pred             chhhCCCCCceEEeCCCc
Confidence            7543   45578887774

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=99.71  E-value=3.5e-17  Score=137.46  Aligned_cols=216  Identities=14%  Similarity=0.119  Sum_probs=146.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccC----CCCCCccCCCeeecCCcchhhhc-------CCC
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIF----PGKKTRFFPGVMIAEEPQWRDCI-------QGS  117 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~~~~~~~~~~~d~~~~~~~~~~~-------~~~  117 (355)
                      ..|.+|||||++.||+++++.|++.|++|++++|+.+......    ..........+|+.|++++.+++       ..+
T Consensus         9 enKvalITGas~GIG~a~a~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~i   88 (251)
T d2c07a1           9 ENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEHKNV   88 (251)
T ss_dssp             SSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHCSCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHhcCCc
Confidence            4578999999999999999999999999999999876543321    11111124457999988877666       368


Q ss_pred             cEEEECCCCCCC---CCCChhhHHHHHHHhhhhHHHHHHHHHcC--CCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCC
Q 018503          118 TAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGN  192 (355)
Q Consensus       118 d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~  192 (355)
                      |++||+|+....   .+...+++...+++|+.++..+.+++...  +.+..++|++||.... .+          .+...
T Consensus        89 Dilvnnag~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~-~~----------~~~~~  157 (251)
T d2c07a1          89 DILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGL-TG----------NVGQA  157 (251)
T ss_dssp             CEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHH-HC----------CTTCH
T ss_pred             eeeeeccccccccccccccHHHHhhhheeeehhhhhhhhhcCcccccCCCeEEEEECCHHhc-CC----------CCCCH
Confidence            999999997543   33456788999999999988887765321  1356789999997651 11          22345


Q ss_pred             hh-HHHHHHHHHHHHhcc---CCCCeEEEEEecEEEeCCCCccc-chHHHHHHHhCCCCCCCCcceecccHHHHHHHHHH
Q 018503          193 DY-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALA-KMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYE  267 (355)
Q Consensus       193 ~y-~~k~~~~~~~~~~~~---~~~~~~~i~Rp~~i~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~  267 (355)
                      .| .+|.....+.+.+..   .+|+++..|.||.+..+...... ....  ......|++      .+...+|+|++++.
T Consensus       158 ~Y~asKaal~~ltr~lA~el~~~gIrVN~V~PG~v~T~~~~~~~~~~~~--~~~~~~pl~------R~~~pedvA~~v~f  229 (251)
T d2c07a1         158 NYSSSKAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTDKISEQIKK--NIISNIPAG------RMGTPEEVANLACF  229 (251)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC-----CCHHHHH--HHHTTCTTS------SCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhhCeEEEEEccCCEecccccccCHHHHH--HHHhcCCCC------CCcCHHHHHHHHHH
Confidence            67 777666655554433   35899999999999776432211 1111  222223332      26789999999999


Q ss_pred             HHhCCC---CCCceEecCC
Q 018503          268 ALSNPS---YRGVINGTAP  283 (355)
Q Consensus       268 ~~~~~~---~~~~~~i~~~  283 (355)
                      ++....   .+..+.+.+|
T Consensus       230 L~S~~s~~itG~~i~vDGG  248 (251)
T d2c07a1         230 LSSDKSGYINGRVFVIDGG  248 (251)
T ss_dssp             HHSGGGTTCCSCEEEESTT
T ss_pred             HhCchhCCCcCcEEEECCC
Confidence            997544   3447777665

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

Probab=99.71  E-value=4.3e-17  Score=136.57  Aligned_cols=220  Identities=12%  Similarity=0.011  Sum_probs=141.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhc-c-CCCCCCccCCCeeecCCcchhhhc-------CCCcE
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAEL-I-FPGKKTRFFPGVMIAEEPQWRDCI-------QGSTA  119 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-~-~~~~~~~~~~~~d~~~~~~~~~~~-------~~~d~  119 (355)
                      +.+.++||||++.||+++++.|+++|++|++.+|++..... . ...........+|+.|++++++++       .++|+
T Consensus         4 ~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~G~iDi   83 (247)
T d2ew8a1           4 KDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTFGRCDI   83 (247)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHcCCcEEEEEeeCCCHHHHHHHHHHHHHHcCCCCE
Confidence            45799999999999999999999999999999998754221 1 111111123457999998887665       36899


Q ss_pred             EEECCCCCCC---CCCChhhHHHHHHHhhhhHHHHHHHHHcC--CCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCChh
Q 018503          120 VVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY  194 (355)
Q Consensus       120 vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~~y  194 (355)
                      +|||||....   .+.+.+.+...+++|+.++..+.+++...  ..+..++|++||...  ..         ..+....|
T Consensus        84 lVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Iv~isS~~~--~~---------~~~~~~~Y  152 (247)
T d2ew8a1          84 LVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTY--WL---------KIEAYTHY  152 (247)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGG--GS---------CCSSCHHH
T ss_pred             EEECCCCCCCCChHhCCHHHhhhhheeehhhhhHHHHHHHhHHHhcCCCCccccccchh--cc---------cCcccccc
Confidence            9999998543   34567888999999999988888765331  135578999999765  21         12234567


Q ss_pred             -HHHHHHHHHHHHhcc---CCCCeEEEEEecEEEeCCCCcccchHHHHHHHhCCCCCCCCcceecccHHHHHHHHHHHHh
Q 018503          195 -LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALS  270 (355)
Q Consensus       195 -~~k~~~~~~~~~~~~---~~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~  270 (355)
                       .+|.....+.+.+..   .+|+++..|.||.+..+....... -........    .......+...+|+|++++.++.
T Consensus       153 ~asKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~-~~~~~~~~~----~~~~l~r~~~pedvA~~v~fL~S  227 (247)
T d2ew8a1         153 ISTKAANIGFTRALASDLGKDGITVNAIAPSLVRTATTEASAL-SAMFDVLPN----MLQAIPRLQVPLDLTGAAAFLAS  227 (247)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCC-------------------C----TTSSSCSCCCTHHHHHHHHHHTS
T ss_pred             hhhhccHHHHHHHHHHHhcccCeEEEEEeeCCCCCcccccccc-chhHHHHHH----HhccCCCCCCHHHHHHHHHHHhC
Confidence             777665555544433   358999999999987654211100 000000000    00111135678999999999987


Q ss_pred             CCC---CCCceEecCCC
Q 018503          271 NPS---YRGVINGTAPN  284 (355)
Q Consensus       271 ~~~---~~~~~~i~~~~  284 (355)
                      ...   .+..+.+.+|-
T Consensus       228 ~~s~~itG~~i~vDGG~  244 (247)
T d2ew8a1         228 DDASFITGQTLAVDGGM  244 (247)
T ss_dssp             GGGTTCCSCEEEESSSC
T ss_pred             chhcCCcCCeEEECCCE
Confidence            543   44477777663

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

Probab=99.71  E-value=1e-17  Score=141.27  Aligned_cols=218  Identities=12%  Similarity=0.047  Sum_probs=148.1

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCC-CCccCCCeeecCCcchhhhcC-------CCcEEE
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGK-KTRFFPGVMIAEEPQWRDCIQ-------GSTAVV  121 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~~-------~~d~vi  121 (355)
                      .++++||||++.||+++++.|+++|++|++.+|+.+......... .......+|+.|++++.++++       .+|++|
T Consensus         5 gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~iDilV   84 (256)
T d1k2wa_           5 GKTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEIGPAACAIALDVTDQASIDRCVAELLDRWGSIDILV   84 (256)
T ss_dssp             TEEEEEETCSSHHHHHHHHHHHHTTEEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEE
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCceEEEEeeCCCHHHHHHHHHHHHHHhCCccEEE
Confidence            478999999999999999999999999999999877654332211 111134579999988876663       689999


Q ss_pred             ECCCCCCC---CCCChhhHHHHHHHhhhhHHHHHHHHHc-C-C-CCCCcEEEEeeeeeeeeCCCCCccccCCCCCCChh-
Q 018503          122 NLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINE-S-P-EGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-  194 (355)
Q Consensus       122 ~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~~~-~-~-~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~~y-  194 (355)
                      |+||....   ...+.+.++..+++|+.++..+.+++.. . + ....++|++||...  +-         ..+....| 
T Consensus        85 nnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~~~~~~~~g~Iv~isS~~~--~~---------~~~~~~~Y~  153 (256)
T d1k2wa_          85 NNAALFDLAPIVEITRESYDRLFAINVSGTLFMMQAVARAMIAGGRGGKIINMASQAG--RR---------GEALVGVYC  153 (256)
T ss_dssp             ECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGG--TS---------CCTTCHHHH
T ss_pred             eecccccccccccCCHHHHHhhhceeeeccccchhhccchhHHhccCCccccccchhh--cc---------ccccccchh
Confidence            99997533   3446678889999999998888775432 1 1 23468999999765  21         12234567 


Q ss_pred             HHHHHHHHHHHHhcc---CCCCeEEEEEecEEEeCCCCcccchHHHH-------------HHHhCCCCCCCCcceecccH
Q 018503          195 LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALAKMIPLF-------------MMFAGGPLGSGQQWFSWIHL  258 (355)
Q Consensus       195 ~~k~~~~~~~~~~~~---~~~~~~~i~Rp~~i~G~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~i~v  258 (355)
                      .+|.....+.+.+..   .+|+++..|.||.+-.+....   +....             ......|+      ..+...
T Consensus       154 asKaal~~lt~~lA~el~~~gIrVN~V~PG~i~T~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~Pl------gR~~~p  224 (256)
T d1k2wa_         154 ATKAAVISLTQSAGLNLIRHGINVNAIAPGVVDGEHWDG---VDAKFADYENLPRGEKKRQVGAAVPF------GRMGRA  224 (256)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTHHH---HHHHHHHHHTCCTTHHHHHHHHHSTT------SSCBCH
T ss_pred             hhhhHHHHHHHHHHHHhcccCeEEEEEecCCCCchhhhh---hhhhhhhhccCChHHHHHHHHhcCCC------CCCcCH
Confidence            677666555544433   358999999999887764211   11111             11111122      236789


Q ss_pred             HHHHHHHHHHHhCCC---CCCceEecCCCccC
Q 018503          259 DDIVNLIYEALSNPS---YRGVINGTAPNPVR  287 (355)
Q Consensus       259 ~Dva~~~~~~~~~~~---~~~~~~i~~~~~~s  287 (355)
                      +|+|.+++.++....   .+..+.+.+|..+|
T Consensus       225 ~evA~~v~fL~S~~a~~iTG~~i~vDGG~~ms  256 (256)
T d1k2wa_         225 EDLTGMAIFLATPEADYIVAQTYNVDGGNWMS  256 (256)
T ss_dssp             HHHHHHHHHTTSGGGTTCCSCEEEESTTSSCC
T ss_pred             HHHHHHHHHHhCchhCCccCceEEECcchhhC
Confidence            999999999886543   45578888886554

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

Probab=99.70  E-value=4.1e-17  Score=137.97  Aligned_cols=224  Identities=12%  Similarity=0.035  Sum_probs=142.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCch-hhccC----C-CCCCccCCCeeecCCcchhhhcC-------
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSK-AELIF----P-GKKTRFFPGVMIAEEPQWRDCIQ-------  115 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~-~~~~~----~-~~~~~~~~~~d~~~~~~~~~~~~-------  115 (355)
                      +.|++|||||++.||+++++.|+++|++|++.+|+... .+...    . .........+|+.|+++++++++       
T Consensus         3 ~gK~alITGas~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G   82 (260)
T d1x1ta1           3 KGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQMG   82 (260)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHHS
T ss_pred             CcCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHhC
Confidence            46799999999999999999999999999999997533 22111    0 01111234579999988877663       


Q ss_pred             CCcEEEECCCCCCC---CCCChhhHHHHHHHhhhhHHHHHHHHHcC--CCCCCcEEEEeeeeeeeeCCCCCccccCCCCC
Q 018503          116 GSTAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPS  190 (355)
Q Consensus       116 ~~d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~  190 (355)
                      ++|++||+||....   .+.+.+.+...+++|+.++..+.+++...  +.+..++|++||...  +..         .+.
T Consensus        83 ~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~--~~~---------~~~  151 (260)
T d1x1ta1          83 RIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHG--LVA---------SAN  151 (260)
T ss_dssp             CCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGG--TSC---------CTT
T ss_pred             CCcEEEeecccccCCchhhhhHHhhhhhhhccccccccccchhhhhHhhcCCceEeecccccc--eec---------cCC
Confidence            68999999998543   34566888999999999988777665321  135568999999865  211         223


Q ss_pred             CChh-HHHHHHHHHHHHhcc---CCCCeEEEEEecEEEeCCCCcc-cchHHHHHHHh----CCCCCCCCcceecccHHHH
Q 018503          191 GNDY-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGAL-AKMIPLFMMFA----GGPLGSGQQWFSWIHLDDI  261 (355)
Q Consensus       191 ~~~y-~~k~~~~~~~~~~~~---~~~~~~~i~Rp~~i~G~~~~~~-~~~~~~~~~~~----~~~~~~~~~~~~~i~v~Dv  261 (355)
                      ...| .+|.....+.+.+..   .+|+++..|.||.+-.+..... ...........    ...+........+...+|+
T Consensus       152 ~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~R~g~pedi  231 (260)
T d1x1ta1         152 KSAYVAAKHGVVGFTKVTALETAGQGITANAICPGWVRTPLVEKQISALAEKNGVDQETAARELLSEKQPSLQFVTPEQL  231 (260)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC------------------------CHHHHCTTCCCBCHHHH
T ss_pred             cchhhhhhhhHHHhHHHHHHHhchhCcEEEEEecCCCCChhhhhhhhhhhhhcCCChHHHHHHHHHhcCCCCCCcCHHHH
Confidence            4567 777666655554433   3589999999998866532111 00000000000    0000000011236789999


Q ss_pred             HHHHHHHHhCCC---CCCceEecCC
Q 018503          262 VNLIYEALSNPS---YRGVINGTAP  283 (355)
Q Consensus       262 a~~~~~~~~~~~---~~~~~~i~~~  283 (355)
                      |++++.++....   .+..+.+.+|
T Consensus       232 A~~v~fL~S~~a~~itG~~i~vDGG  256 (260)
T d1x1ta1         232 GGTAVFLASDAAAQITGTTVSVDGG  256 (260)
T ss_dssp             HHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             HHHHHHHhChhhCCCcCCEEEECcc
Confidence            999999997543   3447777666

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

Probab=99.70  E-value=5.7e-17  Score=136.79  Aligned_cols=219  Identities=12%  Similarity=0.047  Sum_probs=146.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCC----CCCCccCCCeeecCCcchhhhc-------C-C
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP----GKKTRFFPGVMIAEEPQWRDCI-------Q-G  116 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~~d~~~~~~~~~~~-------~-~  116 (355)
                      +.|+++||||++.||+++++.|+++|++|++.+|+.+.......    .........+|+.|++++++++       . .
T Consensus         7 ~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~~   86 (259)
T d2ae2a_           7 EGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHFHGK   86 (259)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHTTTC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeeCCCHHHHHHHHHHHHHHhCCC
Confidence            35799999999999999999999999999999998776543221    1111113357888888776554       2 4


Q ss_pred             CcEEEECCCCCCC---CCCChhhHHHHHHHhhhhHHHHHHHHHcC--CCCCCcEEEEeeeeeeeeCCCCCccccCCCCCC
Q 018503          117 STAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSG  191 (355)
Q Consensus       117 ~d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~  191 (355)
                      +|++||+||....   .+.+.+.+...+++|+.++..+.+++...  +.+..++|++||...  ..         ..+..
T Consensus        87 idilvnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~--~~---------~~~~~  155 (259)
T d2ae2a_          87 LNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSG--AL---------AVPYE  155 (259)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGG--TS---------CCTTC
T ss_pred             ceEEEECCceeccCccccCCHHHHHHHHhcccceeEEEEeeccchhhhhccccccccccccc--cc---------ccccc
Confidence            8999999997533   34567788899999999988877765331  145678999999765  21         11234


Q ss_pred             Chh-HHHHHHHHHHHHhcc---CCCCeEEEEEecEEEeCCCCcc-c--chHHHH-HHHhCCCCCCCCcceecccHHHHHH
Q 018503          192 NDY-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGAL-A--KMIPLF-MMFAGGPLGSGQQWFSWIHLDDIVN  263 (355)
Q Consensus       192 ~~y-~~k~~~~~~~~~~~~---~~~~~~~i~Rp~~i~G~~~~~~-~--~~~~~~-~~~~~~~~~~~~~~~~~i~v~Dva~  263 (355)
                      ..| .+|.....+.+.+..   .+|+++..|.||.+..+..... .  ...... +.....|++      .+...+|+|+
T Consensus       156 ~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~pl~------R~g~pedvA~  229 (259)
T d2ae2a_         156 AVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRCALR------RMGEPKELAA  229 (259)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHHHTTSHHHHHHHHHHHHTSTTC------SCBCHHHHHH
T ss_pred             cchHHHHHHHHHHHHHHHHHhCcCceEEEEeeeCcccCHHHHhhhhchhhHHHHHHHHhcCCCC------CCcCHHHHHH
Confidence            567 777666665554443   3489999999998865421100 0  001111 222333332      2678899999


Q ss_pred             HHHHHHhCCC---CCCceEecCCC
Q 018503          264 LIYEALSNPS---YRGVINGTAPN  284 (355)
Q Consensus       264 ~~~~~~~~~~---~~~~~~i~~~~  284 (355)
                      +++.++....   .+..+.+.+|-
T Consensus       230 ~v~fL~S~~s~~itG~~i~VDGG~  253 (259)
T d2ae2a_         230 MVAFLCFPAASYVTGQIIYVDGGL  253 (259)
T ss_dssp             HHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             HHHHHhCchhCCCcCcEEEECCCe
Confidence            9999997543   34477776663

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

Probab=99.69  E-value=1.1e-16  Score=134.78  Aligned_cols=219  Identities=13%  Similarity=0.052  Sum_probs=146.6

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCC------CCCCccCCCeeecCCcchhhhc-------CC
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP------GKKTRFFPGVMIAEEPQWRDCI-------QG  116 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~------~~~~~~~~~~d~~~~~~~~~~~-------~~  116 (355)
                      .|+++||||++.||+++++.|+++|++|++.+|+.+.......      .........+|+.|++++++++       .+
T Consensus         4 gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~G~   83 (258)
T d1iy8a_           4 DRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERFGR   83 (258)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCCeEEEEeccCCCHHHHHHHHHHHHHHhCC
Confidence            5799999999999999999999999999999998765432211      1111113357999998887665       36


Q ss_pred             CcEEEECCCCCCC----CCCChhhHHHHHHHhhhhHHHHHHHHHcC--CCCCCcEEEEeeeeeeeeCCCCCccccCCCCC
Q 018503          117 STAVVNLAGTPIG----TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPS  190 (355)
Q Consensus       117 ~d~vi~~a~~~~~----~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~  190 (355)
                      +|++|||||....    .+.+.+.++..+++|+.++..+.+++...  ..+..++|++||...  +-.         .+.
T Consensus        84 iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~--~~~---------~~~  152 (258)
T d1iy8a_          84 IDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGG--IRG---------IGN  152 (258)
T ss_dssp             CSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGG--TSB---------CSS
T ss_pred             CCEEEECCcccccCCchhhhhhhHHHHHhhhhccchhhhhhhhHhhhhhhcCCCCcccccHhh--ccC---------CCC
Confidence            8999999996422    23467888999999999988888765321  145668999999765  211         223


Q ss_pred             CChh-HHHHHHHHHHHHhcc---CCCCeEEEEEecEEEeCCCCcc-c-----chHHHH-HHHhCCCCCCCCcceecccHH
Q 018503          191 GNDY-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGAL-A-----KMIPLF-MMFAGGPLGSGQQWFSWIHLD  259 (355)
Q Consensus       191 ~~~y-~~k~~~~~~~~~~~~---~~~~~~~i~Rp~~i~G~~~~~~-~-----~~~~~~-~~~~~~~~~~~~~~~~~i~v~  259 (355)
                      ...| .+|.....+.+.+..   .+|+++..+.||.+..+..... .     ...... ......|+      ..+...+
T Consensus       153 ~~~Y~asKaal~~lt~~lA~el~~~gIrVN~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~pl------~R~~~p~  226 (258)
T d1iy8a_         153 QSGYAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQVNPS------KRYGEAP  226 (258)
T ss_dssp             BHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHHHHHHHCTTCHHHHHHHHHTTCTT------CSCBCHH
T ss_pred             chHHHHHHHHHHHHHHHHHHHhCccCceEEEEeeCcccCHHHHHHHhhcCcccHHHHHHHHHhcCCC------CCCcCHH
Confidence            4567 777665555544433   3589999999999865421000 0     000011 11222222      2367899


Q ss_pred             HHHHHHHHHHhCCC---CCCceEecCCCc
Q 018503          260 DIVNLIYEALSNPS---YRGVINGTAPNP  285 (355)
Q Consensus       260 Dva~~~~~~~~~~~---~~~~~~i~~~~~  285 (355)
                      |+|++++.++....   .+..+.+.+|..
T Consensus       227 dvA~~v~fL~S~~s~~itG~~i~VDGG~s  255 (258)
T d1iy8a_         227 EIAAVVAFLLSDDASYVNATVVPIDGGQS  255 (258)
T ss_dssp             HHHHHHHHHTSGGGTTCCSCEEEESTTTT
T ss_pred             HHHHHHHHHhCchhcCCcCceEEcCcchh
Confidence            99999999997543   444788877754

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

Probab=99.68  E-value=1.7e-16  Score=133.70  Aligned_cols=214  Identities=14%  Similarity=0.020  Sum_probs=142.8

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCC----CCCCccCCCeeecCCcchhhhc-------CCCcE
Q 018503           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP----GKKTRFFPGVMIAEEPQWRDCI-------QGSTA  119 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~~d~~~~~~~~~~~-------~~~d~  119 (355)
                      |.++||||++.||+++++.|+++|++|++.+|+.+.......    .........+|+.|++++.+++       .++|+
T Consensus         2 KValITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDi   81 (255)
T d1gega_           2 KVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFDV   81 (255)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCCCE
T ss_pred             CEEEEcCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCccE
Confidence            346999999999999999999999999999998876543321    1111123457999988777665       36899


Q ss_pred             EEECCCCCCC---CCCChhhHHHHHHHhhhhHHHHHHHHHc-C--CCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCCh
Q 018503          120 VVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINE-S--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGND  193 (355)
Q Consensus       120 vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~~~-~--~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~~  193 (355)
                      +|||||....   .+.+.+.++..+++|+.++..+++++.. +  .....+++++||...  +..         .+....
T Consensus        82 lVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~g~Iv~isS~~~--~~~---------~~~~~~  150 (255)
T d1gega_          82 IVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAG--HVG---------NPELAV  150 (255)
T ss_dssp             EEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGG--TSC---------CTTBHH
T ss_pred             EEecccccccCcHHHhhhhhhhhhhhhcccchhhhhhhhcchhhhhccccccccccchhh--ccc---------Cccccc
Confidence            9999997533   3446778889999999999888876532 1  134457888888765  211         223455


Q ss_pred             h-HHHHHHHHHHHHhcc---CCCCeEEEEEecEEEeCCCCcccchHHHH-------------HHHhCCCCCCCCcceecc
Q 018503          194 Y-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALAKMIPLF-------------MMFAGGPLGSGQQWFSWI  256 (355)
Q Consensus       194 y-~~k~~~~~~~~~~~~---~~~~~~~i~Rp~~i~G~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~i  256 (355)
                      | .+|.....+.+.+..   ..|+++..+.||.+-.+...   .+....             ......|+      ..+.
T Consensus       151 Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~pl------~R~~  221 (255)
T d1gega_         151 YSSSKFAVRGLTQTAARDLAPLGITVNGYCPGIVKTPMWA---EIDRQVSEAAGKPLGYGTAEFAKRITL------GRLS  221 (255)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHH---HHHHHHHHHHTCCTTHHHHHHHTTCTT------CSCB
T ss_pred             chhCHHHHHhhHHHHHHHhhhhCcEEEEEecCcccChHHh---hhhhhhHhhhcccchhHHHHHHhcCCC------CCCc
Confidence            7 777666555544433   34899999999988544211   111111             11112222      2367


Q ss_pred             cHHHHHHHHHHHHhCCC---CCCceEecCCC
Q 018503          257 HLDDIVNLIYEALSNPS---YRGVINGTAPN  284 (355)
Q Consensus       257 ~v~Dva~~~~~~~~~~~---~~~~~~i~~~~  284 (355)
                      ..+|+|++++.++....   .+..+.+.+|-
T Consensus       222 ~peevA~~v~fL~S~~a~~itG~~i~vDGG~  252 (255)
T d1gega_         222 EPEDVAACVSYLASPDSDYMTGQSLLIDGGM  252 (255)
T ss_dssp             CHHHHHHHHHHHHSGGGTTCCSCEEEESSSS
T ss_pred             CHHHHHHHHHHHhCchhCCccCcEEEecCCE
Confidence            89999999999997543   34477777764

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.68  E-value=3.6e-17  Score=137.94  Aligned_cols=217  Identities=12%  Similarity=0.065  Sum_probs=134.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCC----CCCCccCCCeeecCCcchhhhc--------CC
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP----GKKTRFFPGVMIAEEPQWRDCI--------QG  116 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~~d~~~~~~~~~~~--------~~  116 (355)
                      +.++++||||++.||+++++.|++.|++|++++|+.++......    .........+|+.+++++.+++        ..
T Consensus         7 kgK~alVTGas~GIG~aiA~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~g~   86 (259)
T d1xq1a_           7 KAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMFGGK   86 (259)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHTTC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHHHhCCC
Confidence            45899999999999999999999999999999999766543211    1111113346888887766544        24


Q ss_pred             CcEEEECCCCCCC---CCCChhhHHHHHHHhhhhHHHHHHHHHcC--CCCCCcEEEEeeeeeeeeCCCCCccccCCCCCC
Q 018503          117 STAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSG  191 (355)
Q Consensus       117 ~d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~  191 (355)
                      +|++||+||....   .+.+.++++..+++|+.++..+.+++...  ..+..++|++||.... .+          .+..
T Consensus        87 idilvnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~-~~----------~~~~  155 (259)
T d1xq1a_          87 LDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGV-VS----------ASVG  155 (259)
T ss_dssp             CSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC---------------------C
T ss_pred             cccccccccccCCCchhhCCHHHHHHHHHHHhhhheeeehhhhhccccccccccccccccccc-cc----------cccc
Confidence            8999999997533   34567888999999999988887765331  1355789999997651 11          1234


Q ss_pred             Chh-HHHHHHHHHHHHhcc---CCCCeEEEEEecEEEeCCCCcccchHHHH-H-HHhCCCCCCCCcceecccHHHHHHHH
Q 018503          192 NDY-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALAKMIPLF-M-MFAGGPLGSGQQWFSWIHLDDIVNLI  265 (355)
Q Consensus       192 ~~y-~~k~~~~~~~~~~~~---~~~~~~~i~Rp~~i~G~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~i~v~Dva~~~  265 (355)
                      ..| .+|.....+.+.+..   .+|+++..|.||.+-.+.....  ..... + .....|      ...+...+|+|.++
T Consensus       156 ~~Y~asKaal~~lt~~lA~e~~~~gIrVN~V~PG~i~T~~~~~~--~~~~~~~~~~~~~p------l~R~~~pedvA~~v  227 (259)
T d1xq1a_         156 SIYSATKGALNQLARNLACEWASDGIRANAVAPAVIATPLAEAV--YDDEFKKVVISRKP------LGRFGEPEEVSSLV  227 (259)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC---------------------------------CCGGGGHHHH
T ss_pred             ccccccccchhhhhHHHHHHhcccCeEEEEeccCcccCHHhhhh--chHHHHHHHHhCCC------CCCCcCHHHHHHHH
Confidence            568 778766655544433   3589999999998876532111  00000 0 001111      12356789999999


Q ss_pred             HHHHhCCC---CCCceEecCCC
Q 018503          266 YEALSNPS---YRGVINGTAPN  284 (355)
Q Consensus       266 ~~~~~~~~---~~~~~~i~~~~  284 (355)
                      +.++....   .+..+.+.+|-
T Consensus       228 ~fL~S~~s~~iTG~~i~vDGG~  249 (259)
T d1xq1a_         228 AFLCMPAASYITGQTICVDGGL  249 (259)
T ss_dssp             HHHTSGGGTTCCSCEEECCCCE
T ss_pred             HHHhCchhcCCcCcEEEeCCCE
Confidence            99986543   34466666664

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

Probab=99.68  E-value=1.3e-16  Score=134.39  Aligned_cols=218  Identities=14%  Similarity=0.102  Sum_probs=144.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCC----CCCCccCCCeeecCCcchhhhcC--------C
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP----GKKTRFFPGVMIAEEPQWRDCIQ--------G  116 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~~d~~~~~~~~~~~~--------~  116 (355)
                      +.|++|||||++.||++++++|+++|++|++++|++++......    .........+|+.+.++++++++        .
T Consensus         5 ~gK~alITGas~GIG~aia~~la~~G~~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~g~   84 (258)
T d1ae1a_           5 KGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFDGK   84 (258)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTTSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeecCCHHHHHHHHHHHHHHhCCC
Confidence            45799999999999999999999999999999999765433211    11111133578888887765542        3


Q ss_pred             CcEEEECCCCCCC---CCCChhhHHHHHHHhhhhHHHHHHHHHcC--CCCCCcEEEEeeeeeeeeCCCCCccccCCCCCC
Q 018503          117 STAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSG  191 (355)
Q Consensus       117 ~d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~  191 (355)
                      +|++||+||....   .+...+++...+++|+.++..+.+++...  ..+..++|++||...  ...         .+..
T Consensus        85 idilinnag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~~~g~ii~isS~~~--~~~---------~~~~  153 (258)
T d1ae1a_          85 LNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAG--FSA---------LPSV  153 (258)
T ss_dssp             CCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGG--TSC---------CTTC
T ss_pred             cEEEeccccccccCccccCCHHHHhhhhhhcccccccccccccccccccccccccccccccc--ccc---------cccc
Confidence            7999999998644   34567888999999999988887765421  146678999999865  211         2234


Q ss_pred             Chh-HHHHHHHHHHHHhccC---CCCeEEEEEecEEEeCCCCcc-c---chHHHH-HHHhCCCCCCCCcceecccHHHHH
Q 018503          192 NDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGAL-A---KMIPLF-MMFAGGPLGSGQQWFSWIHLDDIV  262 (355)
Q Consensus       192 ~~y-~~k~~~~~~~~~~~~~---~~~~~~i~Rp~~i~G~~~~~~-~---~~~~~~-~~~~~~~~~~~~~~~~~i~v~Dva  262 (355)
                      ..| .+|...+.+.+.+..+   .|+++..|.||.+..+..... .   ...... ......|++      .+...+|+|
T Consensus       154 ~~Y~~sK~al~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~plg------R~~~pediA  227 (258)
T d1ae1a_         154 SLYSASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKTPMG------RAGKPQEVS  227 (258)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC-------------CHHHHHHHHHHSTTC------SCBCHHHHH
T ss_pred             hhHHHHHHHHHHHHHHHHHhcCcCcEEEEEEeeCcccCcchhhhhhhhhhhHHHHHHHHhcCCCC------CCcCHHHHH
Confidence            567 7776666665555443   489999999999976542111 0   001111 111222222      278999999


Q ss_pred             HHHHHHHhCCC---CCCceEecCC
Q 018503          263 NLIYEALSNPS---YRGVINGTAP  283 (355)
Q Consensus       263 ~~~~~~~~~~~---~~~~~~i~~~  283 (355)
                      .+++.++....   .+..+.+.+|
T Consensus       228 ~~v~fL~S~~s~~itG~~i~vDGG  251 (258)
T d1ae1a_         228 ALIAFLCFPAASYITGQIIWADGG  251 (258)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             HHHHHHhChhhCCCcCcEEEeCCC
Confidence            99999996543   3446767665

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

Probab=99.68  E-value=6.5e-16  Score=131.07  Aligned_cols=223  Identities=10%  Similarity=0.033  Sum_probs=146.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCC---CCCCccCCCeeecCCcchhhhcC-------CCc
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP---GKKTRFFPGVMIAEEPQWRDCIQ-------GST  118 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~---~~~~~~~~~~d~~~~~~~~~~~~-------~~d  118 (355)
                      ..|++|||||++.||+++++.|+++|++|++++|+.+..+....   ......+..+|+.|+++++++++       .+|
T Consensus         5 ~gKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD   84 (268)
T d2bgka1           5 QDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKHGKLD   84 (268)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCCceEEEEccCCCHHHHHHHHHHHHHHcCCcc
Confidence            46899999999999999999999999999999998766443221   11111134579999888876663       689


Q ss_pred             EEEECCCCCCC-----CCCChhhHHHHHHHhhhhHHHHHHHHHcC--CCCCCcEEEEeeeeeeeeCCCCCccccCCCCCC
Q 018503          119 AVVNLAGTPIG-----TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSG  191 (355)
Q Consensus       119 ~vi~~a~~~~~-----~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~  191 (355)
                      ++||+||....     .....+.++..+++|+.++..+.+++...  ..+..++|++||...  +...        .+..
T Consensus        85 ~lVnnAG~~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~ii~iss~~~--~~~~--------~~~~  154 (268)
T d2bgka1          85 IMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISS--FTAG--------EGVS  154 (268)
T ss_dssp             EEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGG--TCCC--------TTSC
T ss_pred             eeccccccccCCCcccccCcHHHHHHHHHHhhcchhhhhhhhcchHhhcCCCCccccccccc--cccc--------cccc
Confidence            99999997432     23345778899999999988887765331  145568999988765  2110        0112


Q ss_pred             Chh-HHHHHHHHHHHHhcc---CCCCeEEEEEecEEEeCCCCcc-cchHHHH-HH-HhCCCCCCCCcceecccHHHHHHH
Q 018503          192 NDY-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGAL-AKMIPLF-MM-FAGGPLGSGQQWFSWIHLDDIVNL  264 (355)
Q Consensus       192 ~~y-~~k~~~~~~~~~~~~---~~~~~~~i~Rp~~i~G~~~~~~-~~~~~~~-~~-~~~~~~~~~~~~~~~i~v~Dva~~  264 (355)
                      ..| .+|.....+.+.+..   .+|+++..|.||.+..+..... ..-.... .. ......     ...+...+|+|++
T Consensus       155 ~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~-----~gr~~~pedvA~~  229 (268)
T d2bgka1         155 HVYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQAANL-----KGTLLRAEDVADA  229 (268)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSSSCCHHHHHHHHHHTCSS-----CSCCCCHHHHHHH
T ss_pred             cccchhHHHHHhCHHHHHHHhChhCeEEEecCCCCccChHHhhhhcCCHHHHHHHHHhcccc-----CCCCcCHHHHHHH
Confidence            256 667666555544433   3589999999999887653221 1111111 11 111111     1136789999999


Q ss_pred             HHHHHhCCC---CCCceEecCCCcc
Q 018503          265 IYEALSNPS---YRGVINGTAPNPV  286 (355)
Q Consensus       265 ~~~~~~~~~---~~~~~~i~~~~~~  286 (355)
                      ++.++....   .+..+.+.+|-..
T Consensus       230 v~fL~S~~s~~itGq~i~VDGG~t~  254 (268)
T d2bgka1         230 VAYLAGDESKYVSGLNLVIDGGYTR  254 (268)
T ss_dssp             HHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             HHHHhChhhCCccCceEEECcCccc
Confidence            999997543   4557888777543

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

Probab=99.68  E-value=1.6e-16  Score=134.10  Aligned_cols=218  Identities=14%  Similarity=0.054  Sum_probs=144.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccC----CCCCCccCCCeeecCCcchhhhc-------CCC
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIF----PGKKTRFFPGVMIAEEPQWRDCI-------QGS  117 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~~~~~~~~~~~d~~~~~~~~~~~-------~~~  117 (355)
                      ..++++||||++.||+++++.|++.|++|++++|+.+......    ..........+|+.|++++.+++       ..+
T Consensus         4 ~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   83 (260)
T d1zema1           4 NGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFGKI   83 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            3579999999999999999999999999999999876644321    11111123457899988777665       368


Q ss_pred             cEEEECCCCCCC----CCCChhhHHHHHHHhhhhHHHHHHHHHcC--CCCCCcEEEEeeeeeeeeCCCCCccccCCCCCC
Q 018503          118 TAVVNLAGTPIG----TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSG  191 (355)
Q Consensus       118 d~vi~~a~~~~~----~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~  191 (355)
                      |++||+||....    .+.+.+.+...+++|+.++..+.+++...  ..+..++|++||...  +..         .+..
T Consensus        84 DilVnnaG~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~II~isS~~~--~~~---------~~~~  152 (260)
T d1zema1          84 DFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAG--VKG---------PPNM  152 (260)
T ss_dssp             CEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHH--HSC---------CTTB
T ss_pred             CeehhhhccccccCccccccHHHHHhhccccccccccchhhHHhhhhhhcCCCCCeeechhh--ccC---------Ccch
Confidence            999999996422    34567888999999999988887765331  135568999999765  321         1223


Q ss_pred             Chh-HHHHHHHHHHHHhcc---CCCCeEEEEEecEEEeCCCCc-------------ccchHHHH--HHHhCCCCCCCCcc
Q 018503          192 NDY-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGA-------------LAKMIPLF--MMFAGGPLGSGQQW  252 (355)
Q Consensus       192 ~~y-~~k~~~~~~~~~~~~---~~~~~~~i~Rp~~i~G~~~~~-------------~~~~~~~~--~~~~~~~~~~~~~~  252 (355)
                      ..| .+|.....+.+.+..   .+|+++..+.||.+-.+....             ........  ......|++     
T Consensus       153 ~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~-----  227 (260)
T d1zema1         153 AAYGTSKGAIIALTETAALDLAPYNIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSVPMR-----  227 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSHHHHHHHHHHHHHTCTTSCSSHHHHHHHHHHTSTTS-----
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhhhCCEEEEeccCcccCcchhhcchhhhhhhcccccccCHHHHHHHHHhcCCCC-----
Confidence            467 777666555544433   248999999999987652100             00000000  111222222     


Q ss_pred             eecccHHHHHHHHHHHHhCCC---CCCceEecCC
Q 018503          253 FSWIHLDDIVNLIYEALSNPS---YRGVINGTAP  283 (355)
Q Consensus       253 ~~~i~v~Dva~~~~~~~~~~~---~~~~~~i~~~  283 (355)
                       .+...+|+|++++.++....   .+..+.+.+|
T Consensus       228 -R~g~pedvA~~v~fL~S~~s~~itG~~i~VDGG  260 (260)
T d1zema1         228 -RYGDINEIPGVVAFLLGDDSSFMTGVNLPIAGG  260 (260)
T ss_dssp             -SCBCGGGSHHHHHHHHSGGGTTCCSCEEEESCC
T ss_pred             -CCcCHHHHHHHHHHHhCchhcCccCCeEEeCCC
Confidence             25678999999999997543   3446666553

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=99.67  E-value=3.8e-16  Score=131.11  Aligned_cols=220  Identities=13%  Similarity=0.049  Sum_probs=143.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCC-CCCccCCCeeecCCcchhhhc-------CCCcEE
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-KKTRFFPGVMIAEEPQWRDCI-------QGSTAV  120 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~-------~~~d~v  120 (355)
                      +.|+++||||++.||+++++.|+++|++|++.+|+.+........ ........+|+.|++++++++       ..+|++
T Consensus         5 ~gK~alITGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~iDil   84 (253)
T d1hxha_           5 QGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGERSMFVRHDVSSEADWTLVMAAVQRRLGTLNVL   84 (253)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEEECCCTTCHHHHHHHHHHHHHHHCSCCEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCeEEEEeecCCHHHHHHHHHHHHHHhCCCCeE
Confidence            458999999999999999999999999999999987665433221 111123457888888776555       368999


Q ss_pred             EECCCCCCC---CCCChhhHHHHHHHhhhhHHHHHHHHHcC-CCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCChh-H
Q 018503          121 VNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES-PEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-L  195 (355)
Q Consensus       121 i~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~~y-~  195 (355)
                      ||+||....   .+.+.++++..+++|+.++..+++++... .....++|++||...  +-.         .+....| .
T Consensus        85 VnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~G~Iv~isS~~~--~~~---------~~~~~~Y~a  153 (253)
T d1hxha_          85 VNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETGGSIINMASVSS--WLP---------IEQYAGYSA  153 (253)
T ss_dssp             EECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTCEEEEEECCGGG--TSC---------CTTBHHHHH
T ss_pred             EecccccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCceecccchhh--hcC---------ccccccccc
Confidence            999997543   34467788999999999988887765432 223478999999765  211         2233567 7


Q ss_pred             HHHHHHHHHHHhcc-----CCCCeEEEEEecEEEeCCCCc-cc-chHHHHHHHhCCCCCCCCcceecccHHHHHHHHHHH
Q 018503          196 AEVCREWEGTALKV-----NKDVRLALIRIGIVLGKDGGA-LA-KMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEA  268 (355)
Q Consensus       196 ~k~~~~~~~~~~~~-----~~~~~~~i~Rp~~i~G~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~  268 (355)
                      +|.....+.+.+..     .+++++..+.||.+..+.... .. ....  .......  .....-.+...+|+|++++.+
T Consensus       154 sKaal~~lt~~lA~e~~~~g~~IrVN~I~PG~i~T~~~~~~~~~~~~~--~~~~~~~--~~~~~gr~~~pedvA~~v~fL  229 (253)
T d1hxha_         154 SKAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQASLPKGVSK--EMVLHDP--KLNRAGRAYMPERIAQLVLFL  229 (253)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTCCEEEEEEEESEECCHHHHHHSCTTCCH--HHHBCBT--TTBTTCCEECHHHHHHHHHHH
T ss_pred             hhHHHHHHHHHHHHHHhhcCCCEEEEEEeECCCcCHhHHhhCcchhhH--HHHHhCc--cccccCCCCCHHHHHHHHHHH
Confidence            77665555443332     246899999999987542100 00 0000  0001000  001111367889999999999


Q ss_pred             HhCCC---CCCceEecCC
Q 018503          269 LSNPS---YRGVINGTAP  283 (355)
Q Consensus       269 ~~~~~---~~~~~~i~~~  283 (355)
                      +....   .+..+.+.+|
T Consensus       230 ~S~~s~~itG~~i~VDGG  247 (253)
T d1hxha_         230 ASDESSVMSGSELHADNS  247 (253)
T ss_dssp             HSGGGTTCCSCEEEESSS
T ss_pred             hChhhCCCcCcEEEECcc
Confidence            97543   3446777665

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.67  E-value=1.6e-16  Score=136.53  Aligned_cols=218  Identities=14%  Similarity=0.072  Sum_probs=144.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCC---------CCCCccCCCeeecCCcchhhhc-----
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP---------GKKTRFFPGVMIAEEPQWRDCI-----  114 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~---------~~~~~~~~~~d~~~~~~~~~~~-----  114 (355)
                      ..++++||||++.||+++++.|++.|++|++.+|+.++......         .........+|+.|++++.+++     
T Consensus        11 ~gKvalITGas~GIG~aia~~la~~Ga~Vvi~~r~~~~l~~~~~el~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~   90 (297)
T d1yxma1          11 QGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKSTLD   90 (297)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhhccccCceEEEEeccCCCHHHHHHHHHHHHH
Confidence            46899999999999999999999999999999998765432210         1111113357888988877665     


Q ss_pred             --CCCcEEEECCCCCCC---CCCChhhHHHHHHHhhhhHHHHHHHHHc-C-CCCCCcEEEEeeeeeeeeCCCCCccccCC
Q 018503          115 --QGSTAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINE-S-PEGVRPSVLVSATALGYYGTSETEVFDES  187 (355)
Q Consensus       115 --~~~d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~~~-~-~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~  187 (355)
                        .++|++||+|+....   .....+.+...+++|+.++..+.+++.. + ..+..++|++|++..  .+          
T Consensus        91 ~~G~iDiLVnnAg~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~Ii~~ss~~~--~~----------  158 (297)
T d1yxma1          91 TFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPTK--AG----------  158 (297)
T ss_dssp             HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCCCT--TC----------
T ss_pred             HhCCeEEEEeeccccccCchhhhhhhhhhhhhcccccchhhHHHHHHHhhcccccccccccccccc--cc----------
Confidence              368999999997533   3456788899999999999888876643 1 134456777765432  11          


Q ss_pred             CCCCChh-HHHHHHHHHHHHhccC---CCCeEEEEEecEEEeCCCC-cccchHHHH--HHHhCCCCCCCCcceecccHHH
Q 018503          188 SPSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGG-ALAKMIPLF--MMFAGGPLGSGQQWFSWIHLDD  260 (355)
Q Consensus       188 ~~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~i~Rp~~i~G~~~~-~~~~~~~~~--~~~~~~~~~~~~~~~~~i~v~D  260 (355)
                      .+....| .+|.....+.+.++.+   +|+++..|.||.+..+... ......+..  ......|+      ..+...+|
T Consensus       159 ~~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~pl------gR~g~ped  232 (297)
T d1yxma1         159 FPLAVHSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQKIPA------KRIGVPEE  232 (297)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGGTTSGGGGGGGGTTGGGGSTT------SSCBCTHH
T ss_pred             ccccccchhHHHHHHHHHHHHHHHhcccCceEEEeeeCcCcCcchhhhccccCHHHHHHHHhcCCC------CCCcCHHH
Confidence            1223456 6776666555554443   4899999999998765321 111111000  00111111      23677899


Q ss_pred             HHHHHHHHHhCCC---CCCceEecCCC
Q 018503          261 IVNLIYEALSNPS---YRGVINGTAPN  284 (355)
Q Consensus       261 va~~~~~~~~~~~---~~~~~~i~~~~  284 (355)
                      +|.+++.++....   .+..+.+.+|.
T Consensus       233 vA~~v~fL~Sd~s~~iTG~~i~VDGG~  259 (297)
T d1yxma1         233 VSSVVCFLLSPAASFITGQSVDVDGGR  259 (297)
T ss_dssp             HHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             HHHHHHHHhCchhcCcCCcEEEeCcCh
Confidence            9999999997543   45578787775

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=99.67  E-value=3e-16  Score=131.89  Aligned_cols=214  Identities=13%  Similarity=0.028  Sum_probs=145.9

Q ss_pred             EEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhc-------CCCcEEEECC
Q 018503           52 TVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCI-------QGSTAVVNLA  124 (355)
Q Consensus        52 ~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~-------~~~d~vi~~a  124 (355)
                      ++|||||++.||+.+++.|+++|++|++.+|+.+...++....  ..+..+|+.+.+++.+++       .++|++||||
T Consensus         2 TAlVTGas~GiG~aiA~~la~~Ga~V~i~~r~~~~~~~~~~~~--~~~~~~dv~~~~~~~~~~~~~~~~~G~iDiLVnNA   79 (252)
T d1zmta1           2 TAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFA--ETYPQLKPMSEQEPAELIEAVTSAYGQVDVLVSND   79 (252)
T ss_dssp             EEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHH--HHCTTSEECCCCSHHHHHHHHHHHHSCCCEEEEEC
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhhh--CcEEEeccCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence            6899999999999999999999999999999876654432210  014468999888776655       3689999999


Q ss_pred             CCCCC----CCCChhhHHHHHHHhhhhHHHHHHHHHcC--CCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCChh-HHH
Q 018503          125 GTPIG----TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-LAE  197 (355)
Q Consensus       125 ~~~~~----~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~~y-~~k  197 (355)
                      |....    ...+.+++...+++|+.++..+++++...  +.+..++|++||...  +..         .+....| .+|
T Consensus        80 g~~~~~~~~~~~~~e~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~IV~isS~~~--~~~---------~~~~~~Y~asK  148 (252)
T d1zmta1          80 IFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATP--FGP---------WKELSTYTSAR  148 (252)
T ss_dssp             CCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTT--TSC---------CTTCHHHHHHH
T ss_pred             cCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhcccccceeeccccccc--ccc---------ccccccccccc
Confidence            86422    24456778899999999988877765321  135578999999765  321         1223567 777


Q ss_pred             HHHHHHHHHhcc---CCCCeEEEEEecEEEeCCCCcccc------hHHHH-HHHhCCCCCCCCcceecccHHHHHHHHHH
Q 018503          198 VCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALAK------MIPLF-MMFAGGPLGSGQQWFSWIHLDDIVNLIYE  267 (355)
Q Consensus       198 ~~~~~~~~~~~~---~~~~~~~i~Rp~~i~G~~~~~~~~------~~~~~-~~~~~~~~~~~~~~~~~i~v~Dva~~~~~  267 (355)
                      .....+.+.+..   .+|+++..|.||.+..+.......      ..... ......+++      -+...+|+|++++.
T Consensus       149 aal~~lt~~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~e~~~~~~~~~pl~------R~g~pedvA~~v~f  222 (252)
T d1zmta1         149 AGACTLANALSKELGEYNIPVFAIGPNYLHSEDSPYFYPTEPWKTNPEHVAHVKKVTALQ------RLGTQKELGELVAF  222 (252)
T ss_dssp             HHHHHHHHHHHHHHGGGTCCEEEEEESSBCCBTCCSSCBHHHHTTCHHHHHHHHHHSSSS------SCBCHHHHHHHHHH
T ss_pred             ccHHHHHHHHHHHhcccCcEEEEEecCCCcCcchhhhhhcccccCCHHHHHHHHhcCCCC------CCcCHHHHHHHHHH
Confidence            666555554433   358999999999997664322100      00011 112222322      26789999999999


Q ss_pred             HHhCCC---CCCceEecCCC
Q 018503          268 ALSNPS---YRGVINGTAPN  284 (355)
Q Consensus       268 ~~~~~~---~~~~~~i~~~~  284 (355)
                      ++....   .+..+.+.+|-
T Consensus       223 L~S~~s~~iTG~~i~vdGG~  242 (252)
T d1zmta1         223 LASGSCDYLTGQVFWLAGGF  242 (252)
T ss_dssp             HHTTSCGGGTTCEEEESTTC
T ss_pred             HhCchhcCCcCCeEEECCCc
Confidence            998655   45578787774

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

Probab=99.67  E-value=1.6e-16  Score=134.11  Aligned_cols=217  Identities=16%  Similarity=0.165  Sum_probs=145.9

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCC----CCCCccCCCeeecCCcchhhhcC-------CCc
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP----GKKTRFFPGVMIAEEPQWRDCIQ-------GST  118 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~~d~~~~~~~~~~~~-------~~d  118 (355)
                      +|.+|||||++.||+++++.|+++|++|++.+|+.+.......    .........+|+.|+++++++++       .+|
T Consensus         2 gKValITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~iD   81 (257)
T d2rhca1           2 SEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYGPVD   81 (257)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCSCS
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHhCCCC
Confidence            4678999999999999999999999999999998765443211    11111234579999988776653       689


Q ss_pred             EEEECCCCCCC---CCCChhhHHHHHHHhhhhHHHHHHHHHcC----CCCCCcEEEEeeeeeeeeCCCCCccccCCCCCC
Q 018503          119 AVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES----PEGVRPSVLVSATALGYYGTSETEVFDESSPSG  191 (355)
Q Consensus       119 ~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~~~~----~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~  191 (355)
                      ++|||||....   .+.+.+.++..+++|+.++..+.+++...    +.+..++|++||...  +.         ..+..
T Consensus        82 ilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~~~~~~~~~g~Ii~i~S~~~--~~---------~~~~~  150 (257)
T d2rhca1          82 VLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGG--KQ---------GVVHA  150 (257)
T ss_dssp             EEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTSHHHHTEEEEEEECCGGG--TS---------CCTTC
T ss_pred             EEEecccccCCCChHHcCHHHHHHHHHHHhhhhhHHHHHHhHHHHHHhcCCccccccccccc--cc---------ccccc
Confidence            99999998543   34567888999999999999999877541    134467889888765  21         12234


Q ss_pred             Chh-HHHHHHHHHHHHhccC---CCCeEEEEEecEEEeCCCCccc--------chHH-HH-HHHhCCCCCCCCcceeccc
Q 018503          192 NDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALA--------KMIP-LF-MMFAGGPLGSGQQWFSWIH  257 (355)
Q Consensus       192 ~~y-~~k~~~~~~~~~~~~~---~~~~~~i~Rp~~i~G~~~~~~~--------~~~~-~~-~~~~~~~~~~~~~~~~~i~  257 (355)
                      ..| .+|.....+.+.+..+   +|+++..+.||.+-.+......        ...+ .. ......|++      .+..
T Consensus       151 ~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~e~~~~~~~~~Plg------R~~~  224 (257)
T d2rhca1         151 APYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIG------RYVQ  224 (257)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTTSEEEEEEEEECSBCSHHHHHHHHHHHHHTTCCHHHHHHHHHTTSTTS------SCBC
T ss_pred             hhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCCCCCHHHHHHHhhhhhhcccChHHHHHHHHhcCCCC------CCcC
Confidence            567 7787666655554443   4799999999988654211000        0000 01 112222222      3688


Q ss_pred             HHHHHHHHHHHHhCCC---CCCceEecCC
Q 018503          258 LDDIVNLIYEALSNPS---YRGVINGTAP  283 (355)
Q Consensus       258 v~Dva~~~~~~~~~~~---~~~~~~i~~~  283 (355)
                      .+|+|++++.++....   .+..+.+.+|
T Consensus       225 pedia~~v~fL~S~~s~~itG~~i~vDGG  253 (257)
T d2rhca1         225 PSEVAEMVAYLIGPGAAAVTAQALNVCGG  253 (257)
T ss_dssp             HHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             HHHHHHHHHHHhCchhcCCcCceEEECcC
Confidence            9999999999997543   3447777666

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

Probab=99.65  E-value=3.2e-16  Score=130.67  Aligned_cols=217  Identities=15%  Similarity=0.117  Sum_probs=141.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCC-CccCCCeeecCCcchhhhc-------CCCcEE
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKK-TRFFPGVMIAEEPQWRDCI-------QGSTAV  120 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~d~~~~~~~~~~~-------~~~d~v  120 (355)
                      ..++++||||++.||+++++.|+++|++|++.+|+.+.......... ......+|+.+++++++++       .++|++
T Consensus         4 ~gK~alItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~i~~~~~~i~~~~g~iDiL   83 (241)
T d2a4ka1           4 SGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAEAIAVVADVSDPKAVEAVFAEALEEFGRLHGV   83 (241)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCCSSEEEEECCTTSHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEe
Confidence            35799999999999999999999999999999999876544332211 1123457999988887655       368999


Q ss_pred             EECCCCCCC---CCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCChh-HH
Q 018503          121 VNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-LA  196 (355)
Q Consensus       121 i~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~~y-~~  196 (355)
                      ||+|+....   .+.+.+.+...+++|+.+...+.+++.......+.+ .++|+... ..          .+....| .+
T Consensus        84 innAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~k~~~~~~~~~~~i-~~~ss~a~-~~----------~~~~~~Y~~s  151 (241)
T d2a4ka1          84 AHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSL-VLTGSVAG-LG----------AFGLAHYAAG  151 (241)
T ss_dssp             EEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEE-EEECCCTT-CC----------HHHHHHHHHC
T ss_pred             ccccccccccchhhhhccccccccccccccccccccccccccccccce-eecccccc-cc----------ccCccccchh
Confidence            999987543   344567778899999999999988775532333344 44443321 11          0112345 55


Q ss_pred             HHHHHHHHHHhcc---CCCCeEEEEEecEEEeCCCCcccchHHHH-HHHhCCCCCCCCcceecccHHHHHHHHHHHHhCC
Q 018503          197 EVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALAKMIPLF-MMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNP  272 (355)
Q Consensus       197 k~~~~~~~~~~~~---~~~~~~~i~Rp~~i~G~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~  272 (355)
                      |...+.+.+.++.   .+|+++..+.||.+-.+.......  ... ......+++      .+...+|+|++++.++...
T Consensus       152 K~al~~lt~~lA~el~~~gIrvN~I~PG~v~T~~~~~~~~--~~~~~~~~~~p~~------r~~~p~dva~~v~fL~S~~  223 (241)
T d2a4ka1         152 KLGVVGLARTLALELARKGVRVNVLLPGLIQTPMTAGLPP--WAWEQEVGASPLG------RAGRPEEVAQAALFLLSEE  223 (241)
T ss_dssp             SSHHHHHHHHHHHHHTTTTCEEEEEEECSBCCGGGTTSCH--HHHHHHHHTSTTC------SCBCHHHHHHHHHHHHSGG
T ss_pred             hHHHHHHHHHHHHHHhHhCCEEeeeccCcCCCHHHHhhhH--hHHHHHHhCCCCC------CCcCHHHHHHHHHHHhcch
Confidence            6555555554433   248999999999886543211110  111 222333332      3678999999999999754


Q ss_pred             C---CCCceEecCCCc
Q 018503          273 S---YRGVINGTAPNP  285 (355)
Q Consensus       273 ~---~~~~~~i~~~~~  285 (355)
                      .   .+..+.+.+|..
T Consensus       224 s~~itG~~i~vDGG~s  239 (241)
T d2a4ka1         224 SAYITGQALYVDGGRS  239 (241)
T ss_dssp             GTTCCSCEEEESTTTT
T ss_pred             hCCCcCceEEeCCCcc
Confidence            3   344777777653

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.65  E-value=2.7e-16  Score=132.36  Aligned_cols=218  Identities=15%  Similarity=0.047  Sum_probs=142.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccC----CCC--CCccCCCeeecCCcchhhhc-------C
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIF----PGK--KTRFFPGVMIAEEPQWRDCI-------Q  115 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~~~--~~~~~~~~d~~~~~~~~~~~-------~  115 (355)
                      .+|++|||||++.||+++++.|+++|++|++++|+.++.....    ...  .......+|+.|++++++++       .
T Consensus         2 ~GKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G   81 (254)
T d2gdza1           2 NGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHFG   81 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCCcEEEEEeecCCHHHHHHHHHHHHHHcC
Confidence            3579999999999999999999999999999999976543221    110  11113357999988777666       3


Q ss_pred             CCcEEEECCCCCCCCCCChhhHHHHHHHhhhhHHHHHHHHHcC----C-CCCCcEEEEeeeeeeeeCCCCCccccCCCCC
Q 018503          116 GSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINES----P-EGVRPSVLVSATALGYYGTSETEVFDESSPS  190 (355)
Q Consensus       116 ~~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~----~-~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~  190 (355)
                      ++|++||+||...     ..+++..+++|+.++..+..++...    . ....++|++||...  +-         ..+.
T Consensus        82 ~iDilVnnAg~~~-----~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~~~g~Iv~isS~~~--~~---------~~~~  145 (254)
T d2gdza1          82 RLDILVNNAGVNN-----EKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAG--LM---------PVAQ  145 (254)
T ss_dssp             CCCEEEECCCCCC-----SSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGG--TS---------CCTT
T ss_pred             CcCeecccccccc-----cccchheeeeehhhHHHHHHHHHHHHHHhhcCCCcEEEeeccHhh--cc---------CCCC
Confidence            6899999999752     3446788899998877776655321    1 12356999999765  21         1223


Q ss_pred             CChh-HHHHHHHHHHHH-----hccCCCCeEEEEEecEEEeCCCCcc---------cchHHHHHHHhCCCCCCCCcceec
Q 018503          191 GNDY-LAEVCREWEGTA-----LKVNKDVRLALIRIGIVLGKDGGAL---------AKMIPLFMMFAGGPLGSGQQWFSW  255 (355)
Q Consensus       191 ~~~y-~~k~~~~~~~~~-----~~~~~~~~~~i~Rp~~i~G~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~  255 (355)
                      ...| .+|.....+.+.     ....+|+++..+.||.+-.+.....         ......+  ....+      ...+
T Consensus       146 ~~~Y~asKaal~~ltrs~ala~e~~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~--~~~~p------~~r~  217 (254)
T d2gdza1         146 QPVYCASKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAILESIEKEENMGQYIEYKDHI--KDMIK------YYGI  217 (254)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHHHHGGGCHHHHGGGGGGHHHH--HHHHH------HHCC
T ss_pred             ccchHHHHHHHHHHHHHHHHHHHhcCCCEEEEEEEcCCCCChhhhhccccccccccHHHHHHH--HhcCC------CCCC
Confidence            4567 777665555432     1234689999999998854321000         0011111  00000      1125


Q ss_pred             ccHHHHHHHHHHHHhCCC-CCCceEecCCCccCHHH
Q 018503          256 IHLDDIVNLIYEALSNPS-YRGVINGTAPNPVRLAE  290 (355)
Q Consensus       256 i~v~Dva~~~~~~~~~~~-~~~~~~i~~~~~~s~~e  290 (355)
                      ...+|+|++++.++.++. .+..+.+.+|..+.++|
T Consensus       218 ~~pedvA~~v~fL~s~~~itG~~i~VdGG~~~~~~~  253 (254)
T d2gdza1         218 LDPPLIANGLITLIEDDALNGAIMKITTSKGIHFQD  253 (254)
T ss_dssp             BCHHHHHHHHHHHHHCTTCSSCEEEEETTTEEEECC
T ss_pred             cCHHHHHHHHHHHHcCCCCCCCEEEECCCCeeeccc
Confidence            678999999999998765 44478888887665543

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=99.65  E-value=2.9e-15  Score=127.38  Aligned_cols=221  Identities=14%  Similarity=0.009  Sum_probs=144.6

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchh-hcc----CCCCCCccCCCeeecCCcchhhhc-------C
Q 018503           48 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKA-ELI----FPGKKTRFFPGVMIAEEPQWRDCI-------Q  115 (355)
Q Consensus        48 ~~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~~----~~~~~~~~~~~~d~~~~~~~~~~~-------~  115 (355)
                      ..+++++||||++.||+++++.|+++|++|++.+|+.+.. ...    ...........+|+.|++++.+++       .
T Consensus        16 L~gK~~lITGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~g   95 (272)
T d1g0oa_          16 LEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIFG   95 (272)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHHhhCCceeeEeCCCCCHHHHHHHHHHHHHHhC
Confidence            4568999999999999999999999999999998876432 111    111111123457888888776665       3


Q ss_pred             CCcEEEECCCCCCC---CCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCC
Q 018503          116 GSTAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGN  192 (355)
Q Consensus       116 ~~d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~  192 (355)
                      ++|++||+++....   .....+.+...+++|+.++..+++++...-...+++++++|.... .+         ..+...
T Consensus        96 ~idilV~nag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~g~~i~i~s~~~~-~~---------~~~~~~  165 (272)
T d1g0oa_          96 KLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSITGQ-AK---------AVPKHA  165 (272)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCGGGT-CS---------SCSSCH
T ss_pred             CCCccccccccchhhhhhhhhhhHHHHHhhhccceeeeeccccccccccccccccccccccc-cc---------cccchh
Confidence            68999999997543   345667788899999999999998876531234577888775431 11         112234


Q ss_pred             hh-HHHHHHHHHHHHhcc---CCCCeEEEEEecEEEeCCC------------CcccchHHHHHHHhCCCCCCCCcceecc
Q 018503          193 DY-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDG------------GALAKMIPLFMMFAGGPLGSGQQWFSWI  256 (355)
Q Consensus       193 ~y-~~k~~~~~~~~~~~~---~~~~~~~i~Rp~~i~G~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~i  256 (355)
                      .| .+|...+.+.+.+..   ..|+++..|.||.+-.+..            ................|++      .+.
T Consensus       166 ~Y~asKaal~~ltk~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Plg------R~~  239 (272)
T d1g0oa_         166 VYSGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPLR------RVG  239 (272)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGGSTTCTTCCHHHHHHHHHHHSCTTC------SCB
T ss_pred             hHHHHHHHHHHHHHHHHHHhchhCeEEEEEccCCcCChHHHHHHHhhhhcccccchHHHHHHHHHccCCCC------CCc
Confidence            56 677665555544333   3589999999999865310            0000111111222333332      378


Q ss_pred             cHHHHHHHHHHHHhCCC---CCCceEecCCC
Q 018503          257 HLDDIVNLIYEALSNPS---YRGVINGTAPN  284 (355)
Q Consensus       257 ~v~Dva~~~~~~~~~~~---~~~~~~i~~~~  284 (355)
                      ..+|+|.+++.++....   .+..+.+.+|.
T Consensus       240 ~peevA~~v~fL~s~~s~~itG~~i~vDGG~  270 (272)
T d1g0oa_         240 LPIDIARVVCFLASNDGGWVTGKVIGIDGGA  270 (272)
T ss_dssp             CHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             CHHHHHHHHHHHhCchhcCccCceEeECCCC
Confidence            89999999999997544   34467777664

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.65  E-value=5.5e-16  Score=130.81  Aligned_cols=219  Identities=15%  Similarity=0.040  Sum_probs=140.0

Q ss_pred             CCCEEEEEcCCc--hHHHHHHHHHHhCCCeEEEEecCCchhhcc---CCCCCCccCCCeeecCCcchhhhc-------CC
Q 018503           49 SQMTVSVTGATG--FIGRRLVQRLQADNHQVRVLTRSRSKAELI---FPGKKTRFFPGVMIAEEPQWRDCI-------QG  116 (355)
Q Consensus        49 ~~~~IlVtGatG--~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~---~~~~~~~~~~~~d~~~~~~~~~~~-------~~  116 (355)
                      +.|++|||||+|  .||++++++|+++|++|++.+|+.......   ...........+|+.|++++++++       .+
T Consensus         7 ~gK~alITGas~~~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   86 (256)
T d1ulua_           7 SGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGALLFRADVTQDEELDALFAGVKEAFGG   86 (256)
T ss_dssp             TTCEEEEESCCCSSSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHhhhccCcccccccccCCHHHHHHHHHHHHHhcCC
Confidence            467999999998  799999999999999999988876533211   111111113457888888777665       36


Q ss_pred             CcEEEECCCCCCC-------CCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCCCCccccCCCC
Q 018503          117 STAVVNLAGTPIG-------TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSP  189 (355)
Q Consensus       117 ~d~vi~~a~~~~~-------~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~  189 (355)
                      +|++||+|+....       .+....++...+++|+.++..+++++...-....++|++||...  ..         ..+
T Consensus        87 iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~Iv~isS~~~--~~---------~~~  155 (256)
T d1ulua_          87 LDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYAS--EK---------VVP  155 (256)
T ss_dssp             EEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGG--TS---------BCT
T ss_pred             ceEEEeccccccccccccchhhhhhhhhhHhhhhhHHHHHHHHHHHHHHhccCCEEEEEeehHh--cC---------CCC
Confidence            8999999986421       23345667788999999999998887653122357999998765  21         112


Q ss_pred             CCChh-HHHHHHHHHHHHhcc---CCCCeEEEEEecEEEeCCCCcccchHHHH-HHHhCCCCCCCCcceecccHHHHHHH
Q 018503          190 SGNDY-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALAKMIPLF-MMFAGGPLGSGQQWFSWIHLDDIVNL  264 (355)
Q Consensus       190 ~~~~y-~~k~~~~~~~~~~~~---~~~~~~~i~Rp~~i~G~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~v~Dva~~  264 (355)
                      ....| .+|...+.+.+.+..   .+|+++..+.||.+..+........-... ......|++      .+...+|+|++
T Consensus       156 ~~~~Y~asKaal~~ltr~lA~ela~~gIrVN~I~PG~i~t~~~~~~~~~~~~~~~~~~~~pl~------R~~~pedvA~~  229 (256)
T d1ulua_         156 KYNVMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSIPGFTKMYDRVAQTAPLR------RNITQEEVGNL  229 (256)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC----------CHHHHHHHHHHSTTS------SCCCHHHHHHH
T ss_pred             CchHHHHHHHHHHHHHHHHHHHhcccCCEEeeeccceeeeccccchhhhHHHHHHHHhcCCCC------CCcCHHHHHHH
Confidence            34467 777665555544433   35899999999998766432211111111 122222322      26778999999


Q ss_pred             HHHHHhCCC---CCCceEecCCC
Q 018503          265 IYEALSNPS---YRGVINGTAPN  284 (355)
Q Consensus       265 ~~~~~~~~~---~~~~~~i~~~~  284 (355)
                      ++.++....   .+..+.+.+|.
T Consensus       230 v~fL~S~~s~~itG~~i~VDGG~  252 (256)
T d1ulua_         230 GLFLLSPLASGITGEVVYVDAGY  252 (256)
T ss_dssp             HHHHHSGGGTTCCSCEEEESTTG
T ss_pred             HHHHhCchhCCccCCeEEECcCE
Confidence            999997543   34477777764

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=99.65  E-value=4e-16  Score=130.24  Aligned_cols=213  Identities=15%  Similarity=0.084  Sum_probs=141.2

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCC-chhhccCC----CCCCccCCCeeecCCcchhhhc-------CCCc
Q 018503           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSR-SKAELIFP----GKKTRFFPGVMIAEEPQWRDCI-------QGST  118 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~-~~~~~~~~----~~~~~~~~~~d~~~~~~~~~~~-------~~~d  118 (355)
                      +.||||||++.||++++++|+++|++|++.+++. +..+....    .........+|+.|++++++++       .++|
T Consensus         2 pV~lITGas~GIG~a~a~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD   81 (244)
T d1edoa_           2 PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTID   81 (244)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSCCS
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCCCC
Confidence            3699999999999999999999999998876543 33322211    1111113457999988777665       3689


Q ss_pred             EEEECCCCCCC---CCCChhhHHHHHHHhhhhHHHHHHHHHcC--CCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCCh
Q 018503          119 AVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGND  193 (355)
Q Consensus       119 ~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~~  193 (355)
                      ++||+||....   .+.+.+.++..+++|+.++..+.+++...  +.+..++|++||.... .+          .+....
T Consensus        82 iLVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~-~~----------~~~~~~  150 (244)
T d1edoa_          82 VVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGL-IG----------NIGQAN  150 (244)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHH-HC----------CTTCHH
T ss_pred             ccccccccccccchhccchHHHHHHHhhhhhhHHHHHHHHHHHHHHcCCcEEEEEcChhhc-CC----------CCCCHH
Confidence            99999997543   34567888999999999988887765331  1356789999997651 22          223456


Q ss_pred             h-HHHHHHHHHHHHhcc---CCCCeEEEEEecEEEeCCCCcccchHHHH--HHHhCCCCCCCCcceecccHHHHHHHHHH
Q 018503          194 Y-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALAKMIPLF--MMFAGGPLGSGQQWFSWIHLDDIVNLIYE  267 (355)
Q Consensus       194 y-~~k~~~~~~~~~~~~---~~~~~~~i~Rp~~i~G~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~i~v~Dva~~~~~  267 (355)
                      | .+|.....+.+.+..   .+|+++..+.||.+-.+...   .+.+..  ......|++      .+...+|+|+++..
T Consensus       151 Y~asKaal~~ltk~lA~el~~~gIrvN~I~PG~i~T~~~~---~~~~~~~~~~~~~~pl~------R~~~p~dvA~~v~f  221 (244)
T d1edoa_         151 YAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMTA---KLGEDMEKKILGTIPLG------RTGQPENVAGLVEF  221 (244)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHH---TTCHHHHHHHHTSCTTC------SCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHChHHHHHHHhhhCcEEEEEecceeccHHHH---HhhHHHHHHHHhcCCCC------CCcCHHHHHHHHHH
Confidence            7 777766655554444   35899999999988654211   111111  122222322      36789999999999


Q ss_pred             HHhCCC----CCCceEecCC
Q 018503          268 ALSNPS----YRGVINGTAP  283 (355)
Q Consensus       268 ~~~~~~----~~~~~~i~~~  283 (355)
                      ++..+.    .+..+.+.+|
T Consensus       222 La~S~~a~~itG~~i~vdGG  241 (244)
T d1edoa_         222 LALSPAASYITGQAFTIDGG  241 (244)
T ss_dssp             HHHCSGGGGCCSCEEEESTT
T ss_pred             HHCCchhcCCcCCeEEeCCC
Confidence            864332    4447777666

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.64  E-value=9.5e-16  Score=128.09  Aligned_cols=219  Identities=11%  Similarity=-0.007  Sum_probs=143.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchh---hhcCCCcEEEECCC
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWR---DCIQGSTAVVNLAG  125 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~---~~~~~~d~vi~~a~  125 (355)
                      +.+++|||||++.||+++++.|+++|++|++.+|++++..+........ ...+|+.+.+.++   +.+.++|++||+||
T Consensus         5 ~gK~alITGas~GIG~aia~~la~~G~~Vi~~~r~~~~l~~~~~~~~~~-~~~~d~~~~~~~~~~~~~~~~id~lVn~ag   83 (245)
T d2ag5a1           5 DGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKYPGIQ-TRVLDVTKKKQIDQFANEVERLDVLFNVAG   83 (245)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGGGSTTEE-EEECCTTCHHHHHHHHHHCSCCSEEEECCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhccCCc-eeeeeccccccccccccccccceeEEeccc
Confidence            4579999999999999999999999999999999987766544332100 1123443333333   33357999999999


Q ss_pred             CCCC---CCCChhhHHHHHHHhhhhHHHHHHHHHcC--CCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCChh-HHHHH
Q 018503          126 TPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-LAEVC  199 (355)
Q Consensus       126 ~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~~y-~~k~~  199 (355)
                      ....   ...+.+.+...+++|+.++..+.+++...  ..+..++|++||....    .      ...+....| .+|..
T Consensus        84 ~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~----~------~~~~~~~~Y~~sKaa  153 (245)
T d2ag5a1          84 FVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASS----V------KGVVNRCVYSTTKAA  153 (245)
T ss_dssp             CCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTT----T------BCCTTBHHHHHHHHH
T ss_pred             ccCCCChhhCCHHHHHHHHHHhhccchhHHHhhCcccccCCCceeeeeechhhc----c------CCccchhHHHHHHHH
Confidence            8644   34466788899999999988887766431  1355689999886431    0      112233457 77776


Q ss_pred             HHHHHHHhccC---CCCeEEEEEecEEEeCCCCccc----chHHHH-HHHhCCCCCCCCcceecccHHHHHHHHHHHHhC
Q 018503          200 REWEGTALKVN---KDVRLALIRIGIVLGKDGGALA----KMIPLF-MMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSN  271 (355)
Q Consensus       200 ~~~~~~~~~~~---~~~~~~i~Rp~~i~G~~~~~~~----~~~~~~-~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~  271 (355)
                      .+.+.+.+..+   +|+++..|.||.+-.+......    ...... ......|++      .+...+|+|+++..++..
T Consensus       154 l~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~pl~------R~~~pedva~~v~fL~s~  227 (245)
T d2ag5a1         154 VIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQARGNPEEARNDFLKRQKTG------RFATAEEIAMLCVYLASD  227 (245)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEESCEECHHHHHHHHHSSSHHHHHHHHHHTCTTS------SCEEHHHHHHHHHHHHSG
T ss_pred             HHHHHHHHHHHhhhhCcEEEEEeeceeechhhHhhhhhhhhhHHHHHHHHhcCCCC------CCcCHHHHHHHHHHHhCh
Confidence            66655544442   4899999999999775321100    000011 112222322      367889999999999975


Q ss_pred             CC---CCCceEecCCC
Q 018503          272 PS---YRGVINGTAPN  284 (355)
Q Consensus       272 ~~---~~~~~~i~~~~  284 (355)
                      ..   .+..+.+.+|.
T Consensus       228 ~s~~iTG~~i~VDGG~  243 (245)
T d2ag5a1         228 ESAYVTGNPVIIDGGW  243 (245)
T ss_dssp             GGTTCCSCEEEECTTG
T ss_pred             hhCCCcCceEEeCCCc
Confidence            44   44467777663

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

Probab=99.64  E-value=6.2e-16  Score=128.76  Aligned_cols=195  Identities=15%  Similarity=0.106  Sum_probs=136.0

Q ss_pred             EEEEEcCCchHHHHHHHHHHhCCCe-------EEEEecCCchhhccC----CCCCCccCCCeeecCCcchhhhcC-----
Q 018503           52 TVSVTGATGFIGRRLVQRLQADNHQ-------VRVLTRSRSKAELIF----PGKKTRFFPGVMIAEEPQWRDCIQ-----  115 (355)
Q Consensus        52 ~IlVtGatG~iG~~l~~~L~~~g~~-------V~~~~r~~~~~~~~~----~~~~~~~~~~~d~~~~~~~~~~~~-----  115 (355)
                      .||||||++.||+++++.|+++|++       |+..+|+.+......    ..........+|+.|++++.++++     
T Consensus         3 VvlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~   82 (240)
T d2bd0a1           3 ILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIVER   82 (240)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             EEEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence            4799999999999999999999987       888999876654332    111111234579999887776553     


Q ss_pred             --CCcEEEECCCCCCC---CCCChhhHHHHHHHhhhhHHHHHHHHHcC--CCCCCcEEEEeeeeeeeeCCCCCccccCCC
Q 018503          116 --GSTAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESS  188 (355)
Q Consensus       116 --~~d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~  188 (355)
                        .+|++||+||....   .+.+.+.++..+++|+.++..+.+++...  +.+..++|++||...  +..         .
T Consensus        83 ~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~--~~~---------~  151 (240)
T d2bd0a1          83 YGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAA--TKA---------F  151 (240)
T ss_dssp             TSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGG--TSC---------C
T ss_pred             cCCcceeecccccccCCccccCCHHHHhhcCCEeehHHHHHHHHHhHHHHhcCCCceEEEechhh--cCC---------C
Confidence              68999999998543   34567888999999999988887766431  135678999999765  221         2


Q ss_pred             CCCChh-HHHHHHHHHHHHhcc---CCCCeEEEEEecEEEeCCCCcccchHHHHHHHhCCCCCCCCcceecccHHHHHHH
Q 018503          189 PSGNDY-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNL  264 (355)
Q Consensus       189 ~~~~~y-~~k~~~~~~~~~~~~---~~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~  264 (355)
                      +....| .+|.....+.+.+..   ..|+++..+.||.+-.+......                .+....+...+|+|++
T Consensus       152 ~~~~~Y~asK~al~~lt~~la~el~~~gIrvn~i~PG~v~T~~~~~~~----------------~~~~~~~~~PedvA~~  215 (240)
T d2bd0a1         152 RHSSIYCMSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGKVD----------------DEMQALMMMPEDIAAP  215 (240)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTCCCC----------------STTGGGSBCHHHHHHH
T ss_pred             CCChHHHHHHHHHHHHHHHHHHHhCcCCeEEEEeeeCcccCchhhhcC----------------HhhHhcCCCHHHHHHH
Confidence            234567 777665555444333   35899999999998765321110                1111235678999999


Q ss_pred             HHHHHhCCC
Q 018503          265 IYEALSNPS  273 (355)
Q Consensus       265 ~~~~~~~~~  273 (355)
                      ++.++.++.
T Consensus       216 v~~l~s~~~  224 (240)
T d2bd0a1         216 VVQAYLQPS  224 (240)
T ss_dssp             HHHHHTSCT
T ss_pred             HHHHHcCCc
Confidence            999998765

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=99.64  E-value=3.8e-16  Score=132.23  Aligned_cols=220  Identities=17%  Similarity=0.132  Sum_probs=138.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCC----CC---CCccCCCeeecCCcchhhhcC------
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP----GK---KTRFFPGVMIAEEPQWRDCIQ------  115 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~---~~~~~~~~d~~~~~~~~~~~~------  115 (355)
                      +.|.++||||++.||++++++|+++|++|++.+|+.+.......    ..   .......+|+.++++++++++      
T Consensus         4 ~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~   83 (264)
T d1spxa_           4 AEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGKF   83 (264)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcCceEEEEccCCCHHHHHHHHHHHHHHh
Confidence            35789999999999999999999999999999998766443211    00   001133578888887776663      


Q ss_pred             -CCcEEEECCCCCCC-------CCCChhhHHHHHHHhhhhHHHHHHHHHcC-CCCCCcEEEEeeeeeeeeCCCCCccccC
Q 018503          116 -GSTAVVNLAGTPIG-------TRWSSEIKKEIKESRIRVTSKVVDLINES-PEGVRPSVLVSATALGYYGTSETEVFDE  186 (355)
Q Consensus       116 -~~d~vi~~a~~~~~-------~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~~~~~~v~~Ss~~~~~yg~~~~~~~~e  186 (355)
                       ++|++|||||....       ...+.+.++..+++|+.++..+.+++... ..+...+|+++|+.....+         
T Consensus        84 g~iDilvnnAG~~~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~p~m~~~~g~iI~~~S~~~~~~~---------  154 (264)
T d1spxa_          84 GKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTKGEIVNISSIASGLHA---------  154 (264)
T ss_dssp             SCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCTTSSSSC---------
T ss_pred             CCCCEeecccccccCCccccccccCCHHHHHHHHHHhHHHHHHHHhhhCCccccccCcceeeeeecccccc---------
Confidence             68999999996421       12245678889999999988887765431 1233456676665431011         


Q ss_pred             CCCCCChh-HHHHHHHHHHHHhcc---CCCCeEEEEEecEEEeCCCCcc-------cchHHHH-HHHhCCCCCCCCccee
Q 018503          187 SSPSGNDY-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGAL-------AKMIPLF-MMFAGGPLGSGQQWFS  254 (355)
Q Consensus       187 ~~~~~~~y-~~k~~~~~~~~~~~~---~~~~~~~i~Rp~~i~G~~~~~~-------~~~~~~~-~~~~~~~~~~~~~~~~  254 (355)
                       .+....| .+|.....+.+.+..   .+|+++..|.||.+-.+.....       ....... ......|++      .
T Consensus       155 -~~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~------R  227 (264)
T d1spxa_         155 -TPDFPYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKECVPAG------V  227 (264)
T ss_dssp             -CTTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC--------------HHHHHHHHHHCTTS------S
T ss_pred             -CCCchhhhhhhhhHHHHHHHHHHHhcccCeEEEEEeeCCCCCcchhccCCcHHHHHHHHHHHHHHHhcCCCC------C
Confidence             1223557 777666555544433   3489999999999865532110       0111111 111222222      2


Q ss_pred             cccHHHHHHHHHHHHhCC--C--CCCceEecCCC
Q 018503          255 WIHLDDIVNLIYEALSNP--S--YRGVINGTAPN  284 (355)
Q Consensus       255 ~i~v~Dva~~~~~~~~~~--~--~~~~~~i~~~~  284 (355)
                      +...+|+|++++.++..+  .  .+..+.+.+|.
T Consensus       228 ~g~pedvA~~v~fL~S~~~s~~itG~~i~vDGG~  261 (264)
T d1spxa_         228 MGQPQDIAEVIAFLADRKTSSYIIGHQLVVDGGS  261 (264)
T ss_dssp             CBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTG
T ss_pred             CcCHHHHHHHHHHHhCCcccCCccCceEEeCCCh
Confidence            678899999999998643  2  44477777764

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

Probab=99.63  E-value=6.5e-16  Score=130.48  Aligned_cols=224  Identities=14%  Similarity=0.072  Sum_probs=143.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCC-----CCCccCCCeeecCCcchhhhcC-------C
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-----KKTRFFPGVMIAEEPQWRDCIQ-------G  116 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-----~~~~~~~~~d~~~~~~~~~~~~-------~  116 (355)
                      +.|++|||||++.||+++++.|++.|++|++++|+.+........     ........+|+.|+++++++++       .
T Consensus         8 ~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   87 (260)
T d1h5qa_           8 VNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADLGP   87 (260)
T ss_dssp             TTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHSCS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            357999999999999999999999999999999998765332110     1111134579999988776663       6


Q ss_pred             CcEEEECCCCCCC---CCCChhhHHHHHHHhhhhHHHHHHHHHcC---CCCCCcEEEEeeeeeeeeCCCCCccccCCCCC
Q 018503          117 STAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES---PEGVRPSVLVSATALGYYGTSETEVFDESSPS  190 (355)
Q Consensus       117 ~d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~~~~---~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~  190 (355)
                      +|++||+||....   ...+.++++..+++|+.++..+.+++...   ......++..++...  +.....  .....+.
T Consensus        88 iDilVnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~~g~i~~~~s~~~--~~~~~~--~~~~~~~  163 (260)
T d1h5qa_          88 ISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSS--QIINQS--SLNGSLT  163 (260)
T ss_dssp             EEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGG--TSCCEE--ETTEECS
T ss_pred             CcEecccccccccCCHHHhccccccccccccccchhhhhhhhcccccccccceEEEEeecccc--cccccc--ccccCcc
Confidence            8999999997533   34566778899999999988777654321   134445555555433  111000  0011123


Q ss_pred             CChh-HHHHHHHHHHHHhcc---CCCCeEEEEEecEEEeCCCCccc-chHHHHHHHhCCCCCCCCcceecccHHHHHHHH
Q 018503          191 GNDY-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALA-KMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLI  265 (355)
Q Consensus       191 ~~~y-~~k~~~~~~~~~~~~---~~~~~~~i~Rp~~i~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~  265 (355)
                      ...| .+|.....+.+.+..   .+|+++..+.||.+-.+...... ....  ......|++      .+...+|+|+++
T Consensus       164 ~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~~~~~~~~~--~~~~~~pl~------R~g~pedvA~~v  235 (260)
T d1h5qa_         164 QVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAHMDKKIRD--HQASNIPLN------RFAQPEEMTGQA  235 (260)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGSCHHHHH--HHHHTCTTS------SCBCGGGGHHHH
T ss_pred             ccchhhhhhhHHHHHHHHHHHhchhCeEEeecCCCcccCcchhccCHHHHH--HHHhcCCCC------CCcCHHHHHHHH
Confidence            4567 777666555544433   35899999999998765432211 1111  222333332      267789999999


Q ss_pred             HHHHhCCC---CCCceEecCCC
Q 018503          266 YEALSNPS---YRGVINGTAPN  284 (355)
Q Consensus       266 ~~~~~~~~---~~~~~~i~~~~  284 (355)
                      +.++....   .+..+.+.+|.
T Consensus       236 ~fL~S~~s~~itG~~i~VDGG~  257 (260)
T d1h5qa_         236 ILLLSDHATYMTGGEYFIDGGQ  257 (260)
T ss_dssp             HHHHSGGGTTCCSCEEEECTTG
T ss_pred             HHHhcchhCCCcCceEEECCCe
Confidence            99987543   34477777764

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=99.62  E-value=2e-15  Score=127.42  Aligned_cols=220  Identities=20%  Similarity=0.028  Sum_probs=140.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchh-hcc----CCCCCCccCCCeeecCCcchhhhcC-------C
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKA-ELI----FPGKKTRFFPGVMIAEEPQWRDCIQ-------G  116 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~~----~~~~~~~~~~~~d~~~~~~~~~~~~-------~  116 (355)
                      .+|++|||||++.||.++++.|+++|++|++..|+.... +..    ...........+|+.|+++++++++       +
T Consensus         5 ~GK~alITGas~GIG~aia~~la~~G~~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   84 (259)
T d1ja9a_           5 AGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHFGG   84 (259)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHHcCCCceEecCCCCCHHHHHHHHHHHHHHcCC
Confidence            357999999999999999999999999999877665442 211    1111111234578888887776653       6


Q ss_pred             CcEEEECCCCCCC---CCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCCh
Q 018503          117 STAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGND  193 (355)
Q Consensus       117 ~d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~~  193 (355)
                      +|++||+||....   ...+.+.++..+++|+.+...+++++..+-...+++++++|.... +.         ..+....
T Consensus        85 idilinnag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~~iii~s~~~~-~~---------~~~~~~~  154 (259)
T d1ja9a_          85 LDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGGRIILTSSIAAV-MT---------GIPNHAL  154 (259)
T ss_dssp             EEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEEEEEEEECCGGGT-CC---------SCCSCHH
T ss_pred             CcEEEeccccccccccccchHHHHHHHHhhccceeeeehhhhhhhhhcCCccccccccccc-cc---------CCCCchh
Confidence            8999999998643   234567788999999999988888775521123456666665431 11         1222345


Q ss_pred             h-HHHHHHHHHHHHhcc---CCCCeEEEEEecEEEeCCC----------CcccchHHHH--HHHhCCCCCCCCcceeccc
Q 018503          194 Y-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDG----------GALAKMIPLF--MMFAGGPLGSGQQWFSWIH  257 (355)
Q Consensus       194 y-~~k~~~~~~~~~~~~---~~~~~~~i~Rp~~i~G~~~----------~~~~~~~~~~--~~~~~~~~~~~~~~~~~i~  257 (355)
                      | .+|...+.+.+.+..   ..|+++..|.||.+-.+..          .........+  ......|+      ..+..
T Consensus       155 Y~asK~al~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl------~R~g~  228 (259)
T d1ja9a_         155 YAGSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMNPL------KRIGY  228 (259)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTTCCHHHHHHHHHHTSTT------SSCBC
T ss_pred             HHHHHHHHHHHHHHHHHHHhhcCeEEeccCcCCccChhhhhhhhhhhhhhcccCCHHHHHHHHHhCCCC------CCCcC
Confidence            7 777665555544433   3489999999999864310          0000000111  12222332      23788


Q ss_pred             HHHHHHHHHHHHhCCC---CCCceEecCCC
Q 018503          258 LDDIVNLIYEALSNPS---YRGVINGTAPN  284 (355)
Q Consensus       258 v~Dva~~~~~~~~~~~---~~~~~~i~~~~  284 (355)
                      .+|||++++.++....   .+..+.+.+|.
T Consensus       229 p~eVa~~v~fL~S~~a~~itG~~i~vDGG~  258 (259)
T d1ja9a_         229 PADIGRAVSALCQEESEWINGQVIKLTGGG  258 (259)
T ss_dssp             HHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             HHHHHHHHHHHhCchhcCCcCceEEeCCCC
Confidence            9999999999998654   34477776664

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

Probab=99.61  E-value=2.7e-15  Score=125.87  Aligned_cols=211  Identities=10%  Similarity=-0.020  Sum_probs=136.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCC-----CCCCccCCCeeec-CCcchhhhc-------C
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP-----GKKTRFFPGVMIA-EEPQWRDCI-------Q  115 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-----~~~~~~~~~~d~~-~~~~~~~~~-------~  115 (355)
                      +.++||||||++.||..++++|+++|++|+++.|+.++......     ......+..+|+. +.+++.+++       .
T Consensus         4 ~gK~vlITGgs~GIG~~~A~~la~~G~~vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~g   83 (254)
T d1sbya1           4 TNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQLK   83 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEECCcccHHHHHHHHhhCCCCCEEEEEeecCCCHHHHHHHHHHHHHHcC
Confidence            45799999999999999999999999999999888765432211     1000112335665 333444333       4


Q ss_pred             CCcEEEECCCCCCCCCCChhhHHHHHHHhhhhHHHHHHHHHcC-----CCCCCcEEEEeeeeeeeeCCCCCccccCCCCC
Q 018503          116 GSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINES-----PEGVRPSVLVSATALGYYGTSETEVFDESSPS  190 (355)
Q Consensus       116 ~~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-----~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~  190 (355)
                      ++|++|||||..     ..+.++..+++|+.++..+.+++...     .....++|++||...  +..         .+.
T Consensus        84 ~iDilvnnAG~~-----~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~~~g~Ii~isS~~~--~~~---------~~~  147 (254)
T d1sbya1          84 TVDILINGAGIL-----DDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTG--FNA---------IHQ  147 (254)
T ss_dssp             CCCEEEECCCCC-----CTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGG--TSC---------CTT
T ss_pred             CCCEEEeCCCCC-----CHHHHHHHHHHHhHHHHHHHHHHHHHhhhcccCCCceEEEEechhh--ccC---------CCC
Confidence            789999999964     35667889999999988887766431     123467999998765  221         223


Q ss_pred             CChh-HHHHHHHHHHHHhccC---CCCeEEEEEecEEEeCCC---CcccchHHHH-HHHhCCCCCCCCcceecccHHHHH
Q 018503          191 GNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDG---GALAKMIPLF-MMFAGGPLGSGQQWFSWIHLDDIV  262 (355)
Q Consensus       191 ~~~y-~~k~~~~~~~~~~~~~---~~~~~~i~Rp~~i~G~~~---~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~v~Dva  262 (355)
                      ...| .+|.....+.+.+..+   .|+++..|.||.+..+..   .......+.+ ....         .+.....+++|
T Consensus       148 ~~~Y~asKaal~~~t~~la~el~~~gIrVn~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~e~va  218 (254)
T d1sbya1         148 VPVYSASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPLVHTFNSWLDVEPRVAELLL---------SHPTQTSEQCG  218 (254)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESHHHHSCCCGGGSCTTHHHHHT---------TSCCEEHHHHH
T ss_pred             CHHHHHHHHHHHHHHHHHHhhccccCeEEEEEEeCCCcCccccccccchhHHHHHHhccc---------cCCCCCHHHHH
Confidence            4467 7776655554444332   489999999999986521   1110110111 1111         12345789999


Q ss_pred             HHHHHHHhCCCCCCceEecCCC
Q 018503          263 NLIYEALSNPSYRGVINGTAPN  284 (355)
Q Consensus       263 ~~~~~~~~~~~~~~~~~i~~~~  284 (355)
                      ++++.+++....+.++.+.+|.
T Consensus       219 ~~~~~~~~~~~tG~vi~vdgG~  240 (254)
T d1sbya1         219 QNFVKAIEANKNGAIWKLDLGT  240 (254)
T ss_dssp             HHHHHHHHHCCTTCEEEEETTE
T ss_pred             HHHHHhhhCCCCCCEEEECCCE
Confidence            9999998876555578777763

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.61  E-value=4.3e-16  Score=129.84  Aligned_cols=197  Identities=12%  Similarity=-0.027  Sum_probs=133.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCC----CCCCccCCCeeecCCcchhhhc-------CCC
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP----GKKTRFFPGVMIAEEPQWRDCI-------QGS  117 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~~d~~~~~~~~~~~-------~~~  117 (355)
                      .++.++||||++.||++++++|+++|++|++.+|+.++......    .........+|+.|++++.+++       ..+
T Consensus         6 ~Gkv~lITGas~GIG~~ia~~la~~G~~V~l~~r~~~~l~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g~i   85 (244)
T d1yb1a_           6 TGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEIGDV   85 (244)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHcCCC
Confidence            45799999999999999999999999999999999876543321    1111124457999988777655       368


Q ss_pred             cEEEECCCCCCCC---CCChhhHHHHHHHhhhhHHHHHHHHHcC--CCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCC
Q 018503          118 TAVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGN  192 (355)
Q Consensus       118 d~vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~  192 (355)
                      |++|||||.....   ....+.++..+++|+.++..+.+++...  +.+..++|++||...  +-.         .+...
T Consensus        86 dilinnag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~G~Iv~isS~~~--~~~---------~~~~~  154 (244)
T d1yb1a_          86 SILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAG--HVS---------VPFLL  154 (244)
T ss_dssp             SEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC---CCC---------HHHHH
T ss_pred             ceeEeeccccccccccccchhHHHhhcceeeeccHHHHHHHhhhHHhcCCceEEEeecchh--cCC---------CCCcH
Confidence            9999999986432   2234556789999999988887755321  145678999999876  211         11234


Q ss_pred             hh-HHHHHHHHHHHHhccC------CCCeEEEEEecEEEeCCCCcccchHHHHHHHhCCCCCCCCcceecccHHHHHHHH
Q 018503          193 DY-LAEVCREWEGTALKVN------KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLI  265 (355)
Q Consensus       193 ~y-~~k~~~~~~~~~~~~~------~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~  265 (355)
                      .| .+|.....+.+.++.+      .|+++..+.||.+-.+....   ...              .....+..+|+|+.+
T Consensus       155 ~Y~asKaal~~~~~~La~El~~~~~~gI~V~~i~PG~v~T~~~~~---~~~--------------~~~~~~~pe~va~~i  217 (244)
T d1yb1a_         155 AYCSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIKN---PST--------------SLGPTLEPEEVVNRL  217 (244)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTTC---THH--------------HHCCCCCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhcCCCEEEEEEEcCCCCChhhhC---cCc--------------cccCCCCHHHHHHHH
Confidence            57 7776655555544332      48999999999875442111   000              011345689999999


Q ss_pred             HHHHhCCC
Q 018503          266 YEALSNPS  273 (355)
Q Consensus       266 ~~~~~~~~  273 (355)
                      +..+..+.
T Consensus       218 ~~~~~~~~  225 (244)
T d1yb1a_         218 MHGILTEQ  225 (244)
T ss_dssp             HHHHHTTC
T ss_pred             HHHHhcCC
Confidence            99887653

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.61  E-value=1.2e-15  Score=129.69  Aligned_cols=219  Identities=18%  Similarity=0.115  Sum_probs=140.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCC----CCC---CccCCCeeecCCcchhhhcC------
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP----GKK---TRFFPGVMIAEEPQWRDCIQ------  115 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~~---~~~~~~~d~~~~~~~~~~~~------  115 (355)
                      +.++++||||++.||+++++.|++.|++|++.+|+.++......    ...   ......+|+.|+++++++++      
T Consensus         3 ~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   82 (274)
T d1xhla_           3 SGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAKF   82 (274)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCCCcceEEEEeeCCCHHHHHHHHHHHHHHc
Confidence            35799999999999999999999999999999998765443211    100   00133468888887776653      


Q ss_pred             -CCcEEEECCCCCCC-----CCCChhhHHHHHHHhhhhHHHHHHHHHcC--CCCCCcEEEEeeeeeeeeCCCCCccccCC
Q 018503          116 -GSTAVVNLAGTPIG-----TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDES  187 (355)
Q Consensus       116 -~~d~vi~~a~~~~~-----~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~  187 (355)
                       .+|++||+||....     ...+.+.++..+++|+.++..+.+++...  ..+...++++||...  ..         .
T Consensus        83 G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~ii~~ss~~~--~~---------~  151 (274)
T d1xhla_          83 GKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTKGEIVNVSSIVAG--PQ---------A  151 (274)
T ss_dssp             SCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGS--SS---------C
T ss_pred             CCceEEEeecccccccccccccCCHHHHHHHHhhcccccccccccccccccccccccccchhhhhc--cc---------c
Confidence             68999999996422     11245668899999999988887766431  134556776666443  11         1


Q ss_pred             CCCCChh-HHHHHHHHHHHHhcc---CCCCeEEEEEecEEEeCCCCcc-------cchHHHHHHH-hCCCCCCCCcceec
Q 018503          188 SPSGNDY-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGAL-------AKMIPLFMMF-AGGPLGSGQQWFSW  255 (355)
Q Consensus       188 ~~~~~~y-~~k~~~~~~~~~~~~---~~~~~~~i~Rp~~i~G~~~~~~-------~~~~~~~~~~-~~~~~~~~~~~~~~  255 (355)
                      .+....| .+|.....+.+.++.   .+|+++..+.||.+..+.....       .......... ...|++      .+
T Consensus       152 ~~~~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~iPlg------R~  225 (274)
T d1xhla_         152 HSGYPYYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKECIPVG------HC  225 (274)
T ss_dssp             CTTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTTS------SC
T ss_pred             CCCCceehhhhhHHHHHHHHHHHHHhHhCCceeeeccCCCcCchhhhhcccchhhHHHHHHHHHHHcCCCCC------CC
Confidence            1223467 677665555544333   3589999999999976521100       0000111111 111221      36


Q ss_pred             ccHHHHHHHHHHHHhCC--C--CCCceEecCCC
Q 018503          256 IHLDDIVNLIYEALSNP--S--YRGVINGTAPN  284 (355)
Q Consensus       256 i~v~Dva~~~~~~~~~~--~--~~~~~~i~~~~  284 (355)
                      ...+|+|++++.++..+  .  .+..+.+.+|.
T Consensus       226 g~pediA~~v~fL~S~d~s~~itG~~i~vDGG~  258 (274)
T d1xhla_         226 GKPEEIANIIVFLADRNLSSYIIGQSIVADGGS  258 (274)
T ss_dssp             BCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTG
T ss_pred             cCHHHHHHHHHHHcCCccccCccCcEEEeCcCH
Confidence            78999999999998632  2  45578787775

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.61  E-value=4e-15  Score=127.91  Aligned_cols=226  Identities=15%  Similarity=0.081  Sum_probs=146.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCC----------CCccCCCeeecCCcchhhhc----
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGK----------KTRFFPGVMIAEEPQWRDCI----  114 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~----------~~~~~~~~d~~~~~~~~~~~----  114 (355)
                      +.++++||||++.||+++++.|+++|++|++.+|+.+.........          ........|+.|.+++++++    
T Consensus         6 ~gKvalITGas~GIG~aiA~~la~~Ga~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~~   85 (302)
T d1gz6a_           6 DGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDSVEAGEKLVKTAL   85 (302)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCCGGGHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchhhhhhhhHHHHHHHHHHHhhcccccccccchHHHHHHHHHHHH
Confidence            4578999999999999999999999999999988764321111000          00002235666766655444    


Q ss_pred             ---CCCcEEEECCCCCCC---CCCChhhHHHHHHHhhhhHHHHHHHHHcC--CCCCCcEEEEeeeeeeeeCCCCCccccC
Q 018503          115 ---QGSTAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDE  186 (355)
Q Consensus       115 ---~~~d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~~~~v~~Ss~~~~~yg~~~~~~~~e  186 (355)
                         .++|++|||||....   ...+.+.++..+++|+.++..+++++...  +.+..++|++||.... ++         
T Consensus        86 ~~~G~iDiLVnNAGi~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IV~isS~~~~-~~---------  155 (302)
T d1gz6a_          86 DTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGI-YG---------  155 (302)
T ss_dssp             HHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHHH-HC---------
T ss_pred             HHcCCCCEEEECCccCCCCChhhCCHHHHhhhhceeehhhHHHHHHhHHHHHhCCCcEEEEeCChhhc-CC---------
Confidence               378999999998644   34466788899999999988887765331  1355799999997752 33         


Q ss_pred             CCCCCChh-HHHHHHHHHHHHhccC---CCCeEEEEEecEEEeCCCCcccchHHHHHHHhCCCCCCCCcceecccHHHHH
Q 018503          187 SSPSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIV  262 (355)
Q Consensus       187 ~~~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva  262 (355)
                       .+....| .+|.....+.+.+..+   +|+++..+.|+.+-.....    ..+             +....++..+|+|
T Consensus       156 -~~~~~~Y~asKaal~~lt~~la~E~~~~gIrVN~I~PG~~~t~~~~----~~~-------------~~~~~~~~PedvA  217 (302)
T d1gz6a_         156 -NFGQANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAGSRMTET----VMP-------------EDLVEALKPEYVA  217 (302)
T ss_dssp             -CTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECCSTTTGG----GSC-------------HHHHHHSCGGGTH
T ss_pred             -CCCcHHHHHHHHHHHHHHHHHHHHHhccCCceeeeCCCCCCcchhh----cCc-------------HhhHhcCCHHHHH
Confidence             1234567 7787666655544443   4899999999865322111    110             0112234568999


Q ss_pred             HHHHHHHhCCC--CCCceEecCC-------------------CccCHHHHHHHHHHHhCCC
Q 018503          263 NLIYEALSNPS--YRGVINGTAP-------------------NPVRLAEMCDHLGNVLGRP  302 (355)
Q Consensus       263 ~~~~~~~~~~~--~~~~~~i~~~-------------------~~~s~~el~~~i~~~~g~~  302 (355)
                      .+++.++....  .+.++.+.+|                   .+.+..++++.+.+.....
T Consensus       218 ~~v~fL~S~~a~itG~~i~vdGG~~~~~~~~~~~g~~~~~~~~~~t~e~i~~~~~~i~d~~  278 (302)
T d1gz6a_         218 PLVLWLCHESCEENGGLFEVGAGWIGKLRWERTLGAIVRKRNQPMTPEAVRDNWVKICDFS  278 (302)
T ss_dssp             HHHHHHTSTTCCCCSCEEEEETTEEEEEEEEECCCEECCBTTBCCCHHHHHHTHHHHTCCT
T ss_pred             HHHHHHcCCCcCCCCcEEEeCCCceeEEEEeecCcccccCCCCCCCHHHHHHHHHHHhCcc
Confidence            99999986433  3335555444                   2456667777776666533

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.60  E-value=1.8e-14  Score=120.84  Aligned_cols=213  Identities=16%  Similarity=0.148  Sum_probs=130.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCC--eEEEEecCCchhhccCCCCCC-ccCCCeeecCCcchhhhcC---------C
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNH--QVRVLTRSRSKAELIFPGKKT-RFFPGVMIAEEPQWRDCIQ---------G  116 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~-~~~~~~d~~~~~~~~~~~~---------~  116 (355)
                      ++++||||||++.||.+++++|+++|+  .|++..|+.++...+...... .....+|+.|.++++++++         +
T Consensus         2 ~~KtilITGassGIG~a~a~~la~~G~~~~Vi~~~R~~~~~~~l~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~~~   81 (250)
T d1yo6a1           2 SPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVLPLTVTCDKSLDTFVSKVGEIVGSDG   81 (250)
T ss_dssp             CCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTCCCTTEEEEECCTTCHHHHHHHHHHHHHHHGGGC
T ss_pred             cCCEEEEeCCCCHHHHHHHHHHHHCCCCCEEEEEeCCHHHHHHHHHhhCCceEEEEEecCCHHHHHHHHHHHHHHhCCCC
Confidence            457999999999999999999999985  788899998776654432211 1134578888877765542         3


Q ss_pred             CcEEEECCCCCCC----CCCChhhHHHHHHHhhhhHHHHHHHHHcC-------------CCCCCcEEEEeeeeeeeeCCC
Q 018503          117 STAVVNLAGTPIG----TRWSSEIKKEIKESRIRVTSKVVDLINES-------------PEGVRPSVLVSATALGYYGTS  179 (355)
Q Consensus       117 ~d~vi~~a~~~~~----~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-------------~~~~~~~v~~Ss~~~~~yg~~  179 (355)
                      +|++|||||....    .....+.....+++|+.++..+.+++...             .....+++.+|+.... ....
T Consensus        82 idilinnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~l~~~~~~~~~~~~~~~~~~~i~~s~~~~~-~~~~  160 (250)
T d1yo6a1          82 LSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGS-ITDN  160 (250)
T ss_dssp             CCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGC-STTC
T ss_pred             eEEEEEcCcccCCCCccccCCHHHHHHHHHHHhhhHHHHHHHHHHHHHHhccCCCCccccceecccccccccccc-ccCC
Confidence            8999999997432    23445667889999999988887765310             0122345666654331 1110


Q ss_pred             CCccccCCCCCCChh-HHHHHHHHHHHHhcc---CCCCeEEEEEecEEEeCCCCcccchHHHHHHHhCCCCCCCCcceec
Q 018503          180 ETEVFDESSPSGNDY-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSW  255 (355)
Q Consensus       180 ~~~~~~e~~~~~~~y-~~k~~~~~~~~~~~~---~~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  255 (355)
                      ..   .....+...| .+|.....+.+.++.   ..|+++..+.||.+-.+....                      ...
T Consensus       161 ~~---~~~~~~~~aY~aSKaal~~l~~~la~el~~~gI~v~~i~PG~v~T~m~~~----------------------~~~  215 (250)
T d1yo6a1         161 TS---GSAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLGGK----------------------NAA  215 (250)
T ss_dssp             CS---TTSSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC--------------------------------
T ss_pred             cc---cccchhHHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCCCCCCCC----------------------CCC
Confidence            00   0111123357 777666555544443   348999999999875432110                      012


Q ss_pred             ccHHHHHHHHHHHHhCCC--CCCceEecCCCccC
Q 018503          256 IHLDDIVNLIYEALSNPS--YRGVINGTAPNPVR  287 (355)
Q Consensus       256 i~v~Dva~~~~~~~~~~~--~~~~~~i~~~~~~s  287 (355)
                      +..++.|+.++..+....  ..|.|....++|+.
T Consensus       216 ~~~e~~a~~~~~~~~~~~~~~sG~f~~~~g~p~~  249 (250)
T d1yo6a1         216 LTVEQSTAELISSFNKLDNSHNGRFFMRNLKPYE  249 (250)
T ss_dssp             ---HHHHHHHHHHHTTCCGGGTTCEEETTEEECC
T ss_pred             CCHHHHHHHHHHHHhcCCCCCCeEEECCCCeeCC
Confidence            567888999988887644  44555555555554

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.58  E-value=8.1e-16  Score=130.72  Aligned_cols=222  Identities=17%  Similarity=0.128  Sum_probs=140.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccC----CCC---CCccCCCeeecCCcchhhhcC------
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIF----PGK---KTRFFPGVMIAEEPQWRDCIQ------  115 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~~~---~~~~~~~~d~~~~~~~~~~~~------  115 (355)
                      +.|+++||||++.||+++++.|+++|++|++.+|+.++.....    ...   .......+|+.|+++++++++      
T Consensus         4 ~gK~alVTGas~GIG~aia~~la~~Ga~V~l~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~~   83 (272)
T d1xkqa_           4 SNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQF   83 (272)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCCceEEEEccCCCHHHHHHHHHHHHHHh
Confidence            3579999999999999999999999999999999876544321    110   001134578889887776663      


Q ss_pred             -CCcEEEECCCCCCCC-------CCChhhHHHHHHHhhhhHHHHHHHHHcC-CCCCCcEEEEeeeeeeeeCCCCCccccC
Q 018503          116 -GSTAVVNLAGTPIGT-------RWSSEIKKEIKESRIRVTSKVVDLINES-PEGVRPSVLVSATALGYYGTSETEVFDE  186 (355)
Q Consensus       116 -~~d~vi~~a~~~~~~-------~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~~~~~~v~~Ss~~~~~yg~~~~~~~~e  186 (355)
                       ++|++||+||.....       +...+.+...+++|+.++..+.+++... ..+...+|+++|+.....+         
T Consensus        84 g~iDilvnnAG~~~~~~~~~~~~d~~~~~~~~~~~vNl~~~~~~~~~~~p~m~~~~g~iI~~~Ss~a~~~~---------  154 (272)
T d1xkqa_          84 GKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASKGEIVNVSSIVAGPQA---------  154 (272)
T ss_dssp             SCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGSSSC---------
T ss_pred             CCceEEEeCCcccCcccccccchhccHHHHHHHHHhhhhHHHHHHHhhcccccccCCccccccchhccccC---------
Confidence             689999999975332       1233457888999999988887765431 1123356666654321011         


Q ss_pred             CCCCCChh-HHHHHHHHHHHHhcc---CCCCeEEEEEecEEEeCCCCcc---cchHH----HHHH-HhCCCCCCCCccee
Q 018503          187 SSPSGNDY-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGAL---AKMIP----LFMM-FAGGPLGSGQQWFS  254 (355)
Q Consensus       187 ~~~~~~~y-~~k~~~~~~~~~~~~---~~~~~~~i~Rp~~i~G~~~~~~---~~~~~----~~~~-~~~~~~~~~~~~~~  254 (355)
                       .+....| .+|.....+.+.++.   .+|+++..|.||.+-.+.....   .....    .... ....|++      .
T Consensus       155 -~~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~Plg------R  227 (272)
T d1xkqa_         155 -QPDFLYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKECIPIG------A  227 (272)
T ss_dssp             -CCSSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTTS------S
T ss_pred             -CCCcchhhhHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcchhhhccCCchHHHHHHHHHHHHHhcCCCCC------C
Confidence             1223457 677666555554443   3589999999998865521100   00111    1111 1111221      3


Q ss_pred             cccHHHHHHHHHHHHhCC--C--CCCceEecCCCcc
Q 018503          255 WIHLDDIVNLIYEALSNP--S--YRGVINGTAPNPV  286 (355)
Q Consensus       255 ~i~v~Dva~~~~~~~~~~--~--~~~~~~i~~~~~~  286 (355)
                      +...+|+|++++.++..+  .  .+..+.+.+|..+
T Consensus       228 ~g~pediA~~v~fL~S~~as~~iTG~~i~vDGG~~l  263 (272)
T d1xkqa_         228 AGKPEHIANIILFLADRNLSFYILGQSIVADGGTSL  263 (272)
T ss_dssp             CBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGGG
T ss_pred             CcCHHHHHHHHHHHhCcchhCCccCeEEEeCcCHHH
Confidence            678999999999998632  2  4557878777543

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.58  E-value=2e-14  Score=120.84  Aligned_cols=208  Identities=16%  Similarity=0.061  Sum_probs=135.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCC----CC--CCccCCCeeecCCcchhhhc-------C
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP----GK--KTRFFPGVMIAEEPQWRDCI-------Q  115 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~--~~~~~~~~d~~~~~~~~~~~-------~  115 (355)
                      ..+.+|||||++.||.++++.|+++|++|++.+|+.++......    ..  .......+|+.+++++.+++       .
T Consensus         9 k~Kv~lITGas~GIG~aiA~~la~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~v~~~~~~~g   88 (257)
T d1xg5a_           9 RDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQHS   88 (257)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEEEccCCCHHHHHHHHHHHHHhcC
Confidence            35789999999999999999999999999999999876443311    11  00113357899988777655       3


Q ss_pred             CCcEEEECCCCCCC---CCCChhhHHHHHHHhhhhHHHHHHHHH----cCCCCCCcEEEEeeeeeeeeCCCCCccccCCC
Q 018503          116 GSTAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLIN----ESPEGVRPSVLVSATALGYYGTSETEVFDESS  188 (355)
Q Consensus       116 ~~d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~~----~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~  188 (355)
                      ++|++|||||....   .+.+.+.+...+++|+.+...+.+++.    .......++|++||.+.  +...   +    .
T Consensus        89 ~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~--~~~~---p----~  159 (257)
T d1xg5a_          89 GVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSG--HRVL---P----L  159 (257)
T ss_dssp             CCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGG--TSCC---S----C
T ss_pred             CCCEEEecccccCCCccccccHHHHHhhhhhhhhHHHHHHHHHHHHHHHhccCCCceEEEechHh--cCCC---C----C
Confidence            68999999997533   345678888999999999887766542    21123568999999764  2110   0    0


Q ss_pred             CCCChh-HHHHHHHHHHHHhc-----cCCCCeEEEEEecEEEeCCCCc-ccchHHHHHHHhCCCCCCCCcceecccHHHH
Q 018503          189 PSGNDY-LAEVCREWEGTALK-----VNKDVRLALIRIGIVLGKDGGA-LAKMIPLFMMFAGGPLGSGQQWFSWIHLDDI  261 (355)
Q Consensus       189 ~~~~~y-~~k~~~~~~~~~~~-----~~~~~~~~i~Rp~~i~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dv  261 (355)
                      +....| .+|.....+.+.+.     ...++++..+.||.+-.+.... .........  ...+      ...++..+|+
T Consensus       160 ~~~~~Y~~sKaal~~ltr~la~el~~~~~~I~vn~i~PG~i~t~~~~~~~~~~~~~~~--~~~~------~~r~~~pedv  231 (257)
T d1xg5a_         160 SVTHFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFAFKLHDKDPEKAA--ATYE------QMKCLKPEDV  231 (257)
T ss_dssp             GGGHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHHHHHTTTCHHHHH--HHHC---------CBCHHHH
T ss_pred             cccHHHHHHHHHHHhCHHHHHHHHHhCCCCEEEEEEeCCCCCChhhhhcChhhHHHHH--hcCC------CCCCcCHHHH
Confidence            112346 66766555544332     3468999999998775432100 000111110  0001      1236789999


Q ss_pred             HHHHHHHHhCCC
Q 018503          262 VNLIYEALSNPS  273 (355)
Q Consensus       262 a~~~~~~~~~~~  273 (355)
                      |++++.++..+.
T Consensus       232 A~~v~fL~s~~a  243 (257)
T d1xg5a_         232 AEAVIYVLSTPA  243 (257)
T ss_dssp             HHHHHHHHHSCT
T ss_pred             HHHHHHHhCChh
Confidence            999999998764

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.58  E-value=9e-15  Score=121.56  Aligned_cols=192  Identities=15%  Similarity=0.064  Sum_probs=126.8

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcch-------hhhcC--CCcEE
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQW-------RDCIQ--GSTAV  120 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~-------~~~~~--~~d~v  120 (355)
                      .|+||||||+|.||+++++.|+++|++|.+++++.........      ...++..+.+..       .+.+.  ++|++
T Consensus         2 gK~vlITGas~GIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~iD~l   75 (236)
T d1dhra_           2 ARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEASASV------IVKMTDSFTEQADQVTAEVGKLLGDQKVDAI   75 (236)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTSSEEE------ECCCCSCHHHHHHHHHHHHHHHHTTCCEEEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCccccccccc------eeecccCcHHHHHHHHHHHHHHhCCCCceEE
Confidence            4799999999999999999999999999999987654321111      112222222222       22222  48999


Q ss_pred             EECCCCCCC-C---CCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCChh-H
Q 018503          121 VNLAGTPIG-T---RWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-L  195 (355)
Q Consensus       121 i~~a~~~~~-~---~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~~y-~  195 (355)
                      ||+||.... .   ....+.++..+++|+.++..+.+++...-....++|++||...  +..         .+....| .
T Consensus        76 InnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~G~Iv~isS~~~--~~~---------~~~~~~Y~a  144 (236)
T d1dhra_          76 LCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAA--LDG---------TPGMIGYGM  144 (236)
T ss_dssp             EECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGG--GSC---------CTTBHHHHH
T ss_pred             EECCcccccccchhcCCHHHHHHHHHHcchHHHHHHHHHHHhcccccceeEEccHHH--cCC---------ccCCcccHH
Confidence            999985322 1   2223556778899999988888776542123368999999765  221         2234568 8


Q ss_pred             HHHHHHHHHHHhccC-----CCCeEEEEEecEEEeCCCCcccchHHHHHHHhCCCCCCCCcceecccHHHHHHHHHHHHh
Q 018503          196 AEVCREWEGTALKVN-----KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALS  270 (355)
Q Consensus       196 ~k~~~~~~~~~~~~~-----~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~  270 (355)
                      +|.....+.+.++.+     .|+++..+.||.+..+.       ..  . ...     ....-.++..+|+|+.+..++.
T Consensus       145 sKaal~~lt~~la~El~~~~~gI~vn~v~PG~v~T~~-------~~--~-~~~-----~~~~~~~~~pe~va~~~~~l~s  209 (236)
T d1dhra_         145 AKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPM-------NR--K-SMP-----EADFSSWTPLEFLVETFHDWIT  209 (236)
T ss_dssp             HHHHHHHHHHHHTSTTSSCCTTCEEEEEEESCEECHH-------HH--H-HST-----TSCGGGSEEHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHhccCCCcEEEEEEEeccCcCCc-------ch--h-hCc-----cchhhcCCCHHHHHHHHHHHhC
Confidence            888877777776553     47999999999987652       11  0 110     1112246789999999999997


Q ss_pred             CCC
Q 018503          271 NPS  273 (355)
Q Consensus       271 ~~~  273 (355)
                      ...
T Consensus       210 ~~~  212 (236)
T d1dhra_         210 GNK  212 (236)
T ss_dssp             TTT
T ss_pred             CCc
Confidence            643

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

Probab=99.57  E-value=5.7e-15  Score=127.17  Aligned_cols=219  Identities=15%  Similarity=0.041  Sum_probs=136.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCC-----CCCccCCCeeecCCcchhhhc-------CC
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-----KKTRFFPGVMIAEEPQWRDCI-------QG  116 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-----~~~~~~~~~d~~~~~~~~~~~-------~~  116 (355)
                      ++|+++||||+|.||++++++|++.|++|++++|+.++.......     ........+|+.+.+.+.+++       .+
T Consensus        24 ~gK~alITGas~GIG~aiA~~la~~Ga~Vii~~r~~~~l~~~~~~l~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~g~  103 (294)
T d1w6ua_          24 QGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKVAGH  103 (294)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHTCS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHhcCCceEEEEecccChHHHHHHhhhhhhhccc
Confidence            347999999999999999999999999999999997654322110     111113347888888776554       36


Q ss_pred             CcEEEECCCCCCC---CCCChhhHHHHHHHhhhhHHHHHHHHHc-C--CCCCCcEEEEeeeeeeeeCCCCCccccCCCCC
Q 018503          117 STAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINE-S--PEGVRPSVLVSATALGYYGTSETEVFDESSPS  190 (355)
Q Consensus       117 ~d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~~~-~--~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~  190 (355)
                      +|++||+||....   ...........+.+|......+...+.. .  ......++.+++...  ..         ..+.
T Consensus       104 iDilvnnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~i~~~ss~~~--~~---------~~~~  172 (294)
T d1w6ua_         104 PNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYA--ET---------GSGF  172 (294)
T ss_dssp             CSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHH--HH---------CCTT
T ss_pred             cchhhhhhhhccccccccchhhhhhhheeeecccchhhhhhhhcccccccccccccccccchh--hh---------cccc
Confidence            8999999997533   2334455667778888886666544321 0  134444555555433  11         1122


Q ss_pred             CChh-HHHHHHHHHHHHhcc---CCCCeEEEEEecEEEeCCCCcccc-hHHHH-HHHhCCCCCCCCcceecccHHHHHHH
Q 018503          191 GNDY-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALAK-MIPLF-MMFAGGPLGSGQQWFSWIHLDDIVNL  264 (355)
Q Consensus       191 ~~~y-~~k~~~~~~~~~~~~---~~~~~~~i~Rp~~i~G~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~i~v~Dva~~  264 (355)
                      ...| .+|.....+.+.+..   ..|+++..|.||.+..+....... .-... ......|++      .+...+|+|.+
T Consensus       173 ~~~YsasKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~pl~------R~~~pediA~~  246 (294)
T d1w6ua_         173 VVPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLDPTGTFEKEMIGRIPCG------RLGTVEELANL  246 (294)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------CCTTSHHHHHHHTTCTTS------SCBCHHHHHHH
T ss_pred             cchHHHHHHHHHHHHHHHHHHHhHhCeEEEEEccCccccchhhhccCCcHHHHHHHhhcCCCC------CCCCHHHHHHH
Confidence            3457 777666655554443   358999999999997654211100 11111 222222332      36788999999


Q ss_pred             HHHHHhCCC---CCCceEecCCC
Q 018503          265 IYEALSNPS---YRGVINGTAPN  284 (355)
Q Consensus       265 ~~~~~~~~~---~~~~~~i~~~~  284 (355)
                      +..++....   .+.++.+.+|.
T Consensus       247 v~fL~sd~s~~itG~~i~vDGG~  269 (294)
T d1w6ua_         247 AAFLCSDYASWINGAVIKFDGGE  269 (294)
T ss_dssp             HHHHTSGGGTTCCSCEEEESTTH
T ss_pred             HHHHhCchhcCCCCcEEEECCCh
Confidence            999997543   44577787775

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

Probab=99.56  E-value=1.7e-15  Score=128.98  Aligned_cols=218  Identities=16%  Similarity=0.067  Sum_probs=136.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCC-CCccCCCeeecCCcchhhhc-------CCCcEE
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGK-KTRFFPGVMIAEEPQWRDCI-------QGSTAV  120 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~-------~~~d~v  120 (355)
                      +.++++||||++.||+++++.|+++|++|++++|+.++........ .......+|+.+.+++++++       ..+|++
T Consensus         4 ~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~idil   83 (276)
T d1bdba_           4 KGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETDHGDNVLGIVGDVRSLEDQKQAASRCVARFGKIDTL   83 (276)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCCeeEEecccccHHHHHHHHHHHHHHhCCcccc
Confidence            3579999999999999999999999999999999977654332211 11113456888888776655       368999


Q ss_pred             EECCCCCCCC--------CCChhhHHHHHHHhhhhHHHHHHHHHcC-CCCCCcEEEEeeeeeeeeCCCCCccccCCCCCC
Q 018503          121 VNLAGTPIGT--------RWSSEIKKEIKESRIRVTSKVVDLINES-PEGVRPSVLVSATALGYYGTSETEVFDESSPSG  191 (355)
Q Consensus       121 i~~a~~~~~~--------~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~  191 (355)
                      ||+||.....        ....+.++..+++|+.++..+.+++... .....++|+++|.... .+          .+..
T Consensus        84 vnnAG~~~~~~~~~~~~~e~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~g~iI~i~S~~~~-~~----------~~~~  152 (276)
T d1bdba_          84 IPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIHAVKACLPALVASRGNVIFTISNAGF-YP----------NGGG  152 (276)
T ss_dssp             ECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGT-ST----------TSSC
T ss_pred             cccccccCCCCccccccccchhhhhhHHHHHhhHHHHHHHHHHHHHHHhcCCCceeeeechhc-cC----------CCCC
Confidence            9999964221        1112346788999999988887765321 1123578888886541 11          1234


Q ss_pred             Chh-HHHHHHHHHHHHhccC--CCCeEEEEEecEEEeCCCCccc-----chHH---HHHH-HhCCCCCCCCcceecccHH
Q 018503          192 NDY-LAEVCREWEGTALKVN--KDVRLALIRIGIVLGKDGGALA-----KMIP---LFMM-FAGGPLGSGQQWFSWIHLD  259 (355)
Q Consensus       192 ~~y-~~k~~~~~~~~~~~~~--~~~~~~i~Rp~~i~G~~~~~~~-----~~~~---~~~~-~~~~~~~~~~~~~~~i~v~  259 (355)
                      ..| .+|.....+.+.++.+  .++++..|.||.+-.+......     ....   .... ....|++      -+...+
T Consensus       153 ~~Y~asKaal~~ltr~lA~ela~~IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~Plg------R~g~pe  226 (276)
T d1bdba_         153 PLYTAAKHAIVGLVRELAFELAPYVRVNGVGSGGINSDLRGPSSLGMGSKAISTVPLADMLKSVLPIG------RMPEVE  226 (276)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCSCCCCCGGGC---------CHHHHHTTTCTTS------SCCCGG
T ss_pred             chHHHHHHHHHHHHHHHHHHhhcceEEcccCCCCEecCcCCccchhhhhhccCcHHHHHHHHhcCCCC------CCcCHH
Confidence            567 7776555444433322  2499999999998655321110     0000   0011 1112221      256789


Q ss_pred             HHHHHHHHHHhCC--C--CCCceEecCC
Q 018503          260 DIVNLIYEALSNP--S--YRGVINGTAP  283 (355)
Q Consensus       260 Dva~~~~~~~~~~--~--~~~~~~i~~~  283 (355)
                      |+|.+++.++..+  .  .+..+++.+|
T Consensus       227 eva~~v~fL~S~~~a~~itG~~i~VDGG  254 (276)
T d1bdba_         227 EYTGAYVFFATRGDAAPATGALLNYDGG  254 (276)
T ss_dssp             GGSHHHHHHHCHHHHTTCSSCEEEESSS
T ss_pred             HHHHHHHHHcCCcccCCeeCcEEEECcC
Confidence            9999999888532  2  4557777776

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=99.55  E-value=5.1e-14  Score=118.79  Aligned_cols=200  Identities=16%  Similarity=0.145  Sum_probs=135.6

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhCCC-eEEEEecCCchhh---cc----CCCCCCccCCCeeecCCcchhhhcC------C
Q 018503           51 MTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRSKAE---LI----FPGKKTRFFPGVMIAEEPQWRDCIQ------G  116 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~---~~----~~~~~~~~~~~~d~~~~~~~~~~~~------~  116 (355)
                      .+||||||+|.||.+++++|+++|+ .|+.+.|+.....   ..    ...........+|+.|.+++.++++      .
T Consensus        10 gt~lVTGgs~GIG~a~a~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dv~d~~~~~~~~~~i~~~~~   89 (259)
T d2fr1a1          10 GTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGIGDDVP   89 (259)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCTTSC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCccCHHHHHHHHHHHHhccccccccccccchHHHHHHhhcccccccc
Confidence            4899999999999999999999998 5888888643321   11    1111111234578888888877663      4


Q ss_pred             CcEEEECCCCCCC---CCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCCh
Q 018503          117 STAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGND  193 (355)
Q Consensus       117 ~d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~~  193 (355)
                      +|.|||+++....   .....+.....++.|+.+..++.+++..  .+..++|++||.... +|.          +....
T Consensus        90 i~~vv~~ag~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~~--~~~~~iv~~SS~a~~-~g~----------~~~~~  156 (259)
T d2fr1a1          90 LSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTRE--LDLTAFVLFSSFASA-FGA----------PGLGG  156 (259)
T ss_dssp             EEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTT--SCCSEEEEEEEHHHH-TCC----------TTCTT
T ss_pred             ccccccccccccccccccccHHHHHHHhhhhccchhHHHHHhhc--cCCceEeeecchhhc-cCC----------cccHH
Confidence            6899999998644   2334566677889999999999998877  577789999998762 332          22455


Q ss_pred             h-HHHHHHHHHHHHhccCCCCeEEEEEecEEEeCCCCcccchHHHHHHHhCCCCCCCCcceecccHHHHHHHHHHHHhCC
Q 018503          194 Y-LAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNP  272 (355)
Q Consensus       194 y-~~k~~~~~~~~~~~~~~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~  272 (355)
                      | .+|...+.+...+.. .|++++.|.||.+.+.+.... ...   .     .+  .......+..+++++++..++..+
T Consensus       157 YaAaka~l~~la~~~~~-~Gi~v~~I~pg~~~~~g~~~~-~~~---~-----~~--~~~G~~~~~~~~~~~~l~~~l~~~  224 (259)
T d2fr1a1         157 YAPGNAYLDGLAQQRRS-DGLPATAVAWGTWAGSGMAEG-PVA---D-----RF--RRHGVIEMPPETACRALQNALDRA  224 (259)
T ss_dssp             THHHHHHHHHHHHHHHH-TTCCCEEEEECCBC---------------------C--TTTTEECBCHHHHHHHHHHHHHTT
T ss_pred             HHHHHHhHHHHHHHHHh-CCCCEEECCCCcccCCccccc-hHH---H-----HH--HhcCCCCCCHHHHHHHHHHHHhCC
Confidence            7 777777766665554 599999999998876542110 000   0     00  011234678999999999999876


Q ss_pred             CCC
Q 018503          273 SYR  275 (355)
Q Consensus       273 ~~~  275 (355)
                      ...
T Consensus       225 ~~~  227 (259)
T d2fr1a1         225 EVC  227 (259)
T ss_dssp             CSS
T ss_pred             Cce
Confidence            533

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.51  E-value=2.1e-14  Score=122.58  Aligned_cols=220  Identities=15%  Similarity=0.078  Sum_probs=132.7

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhCCCeEEEE---ecCCchhhcc-------CCCCCCccCCCeeecCCcchhhhcC-----
Q 018503           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVL---TRSRSKAELI-------FPGKKTRFFPGVMIAEEPQWRDCIQ-----  115 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~g~~V~~~---~r~~~~~~~~-------~~~~~~~~~~~~d~~~~~~~~~~~~-----  115 (355)
                      +.||||||++.||+++++.|++.|.+|+.+   .|+.+....+       ...........+|+.|.+++.++++     
T Consensus         3 kVvlITGassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~g   82 (285)
T d1jtva_           3 TVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVTEG   82 (285)
T ss_dssp             EEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCTTS
T ss_pred             CEEEEccCCCHHHHHHHHHHHHCCCCeEEEEEecCChhhhHHHHHHHHHHhccCCceEEEeccccchHhhhhhhhhcccc
Confidence            457899999999999999999999765444   4443332211       1111111234578889888877663     


Q ss_pred             CCcEEEECCCCCCC---CCCChhhHHHHHHHhhhhHHHHHHHHHcC--CCCCCcEEEEeeeeeeeeCCCCCccccCCCCC
Q 018503          116 GSTAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPS  190 (355)
Q Consensus       116 ~~d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~  190 (355)
                      .+|++||+|+....   ...+.+.+...+++|+.++.++.+++...  +.+..++|++||...  .-         ..+.
T Consensus        83 ~idilvnnag~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~m~~~~~G~Iv~isS~~g--~~---------~~~~  151 (285)
T d1jtva_          83 RVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGG--LM---------GLPF  151 (285)
T ss_dssp             CCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGG--TS---------CCTT
T ss_pred             chhhhhhcccccccccccchhHhhhhhhhhcchhHHHHHHHHHHHHHHHcCCCceEEEechhh--cC---------CCCC
Confidence            57999999997543   33466778899999999988887765321  145678999999765  21         1223


Q ss_pred             CChh-HHHHHHHHHHHHhcc---CCCCeEEEEEecEEEeCCCCcc-c---chHH-----HH-HHHhCCCCCCCCcceecc
Q 018503          191 GNDY-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGAL-A---KMIP-----LF-MMFAGGPLGSGQQWFSWI  256 (355)
Q Consensus       191 ~~~y-~~k~~~~~~~~~~~~---~~~~~~~i~Rp~~i~G~~~~~~-~---~~~~-----~~-~~~~~~~~~~~~~~~~~i  256 (355)
                      ...| .+|.....+.+.++.   .+|+++..+.||.+-.+..... .   ....     .. ...+.......-......
T Consensus       152 ~~~Y~asKaal~~l~~~la~El~~~gIrVn~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (285)
T d1jtva_         152 NDVYCASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAFMEKVLGSPEEVLDRTDIHTFHRFYQYLAHSKQVFREAAQ  231 (285)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC-------CCHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHCB
T ss_pred             chHHHHHHHHHHHHHHHHHHHhhccCcEEEEEecCCCCChHHHHhccCHHHHhhccchhHHHHHHHHHHHHhhhhcccCC
Confidence            4567 778766655554443   3489999999998865432110 0   0000     00 000000000000001245


Q ss_pred             cHHHHHHHHHHHHhCCCCCCceEecC
Q 018503          257 HLDDIVNLIYEALSNPSYRGVINGTA  282 (355)
Q Consensus       257 ~v~Dva~~~~~~~~~~~~~~~~~i~~  282 (355)
                      ..+|||++++.++..+.+.-.| +.+
T Consensus       232 ~PeeVA~~v~~~~~~~~p~~ry-~~g  256 (285)
T d1jtva_         232 NPEEVAEVFLTALRAPKPTLRY-FTT  256 (285)
T ss_dssp             CHHHHHHHHHHHHHCSSCCSEE-ESC
T ss_pred             CHHHHHHHHHHHHhCCCCCeEE-ecH
Confidence            7899999999999987533234 443

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=99.51  E-value=2.9e-14  Score=118.40  Aligned_cols=192  Identities=15%  Similarity=0.075  Sum_probs=121.0

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCC-----cchhhhc--CCCcEEEEC
Q 018503           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEE-----PQWRDCI--QGSTAVVNL  123 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~-----~~~~~~~--~~~d~vi~~  123 (355)
                      .|||||||+|.||++++++|+++|++|++++|+...........    ...++..+.     +.+...+  ..+|++|||
T Consensus         3 gkVlITGas~GIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~g~iD~linn   78 (235)
T d1ooea_           3 GKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQADSNILV----DGNKNWTEQEQSILEQTASSLQGSQVDGVFCV   78 (235)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTSSEEEEC----CTTSCHHHHHHHHHHHHHHHHTTCCEEEEEEC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCchhccccccee----ccccCchhHHHHHHHHHHHHhcCCCeeEEEEC
Confidence            48999999999999999999999999999999875422111100    111222211     1222222  358999999


Q ss_pred             CCCCCC---CCCC-hhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCChh-HHHH
Q 018503          124 AGTPIG---TRWS-SEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-LAEV  198 (355)
Q Consensus       124 a~~~~~---~~~~-~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~~y-~~k~  198 (355)
                      ||....   .... .+.++..+++|+.++..+.+++...-....++|++||...  +..         .+....| .+|.
T Consensus        79 AG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~Iv~isS~~~--~~~---------~~~~~~Y~asKa  147 (235)
T d1ooea_          79 AGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAA--MGP---------TPSMIGYGMAKA  147 (235)
T ss_dssp             CCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGG--GSC---------CTTBHHHHHHHH
T ss_pred             CcccccccccccCcHHHHhhHhhhHHHHHHHHhhhcccccccceEEEEeccHHh--cCC---------cccccchHHHHH
Confidence            996322   1112 3455677899999988887776542112368999998765  221         1223567 7887


Q ss_pred             HHHHHHHHhccC-----CCCeEEEEEecEEEeCCCCcccchHHHHHHHhCCCCCCCCcceecccHHHHHHHHHHHHhCC
Q 018503          199 CREWEGTALKVN-----KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNP  272 (355)
Q Consensus       199 ~~~~~~~~~~~~-----~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~  272 (355)
                      ..+.+.+.+..+     .++++..+.|+.+-.+.       ..  ....      ......++..+|+++.++.++..+
T Consensus       148 al~~l~~~la~e~~~~~~~i~v~~i~Pg~~~T~~-------~~--~~~~------~~~~~~~~~~~~va~~~~~~l~~~  211 (235)
T d1ooea_         148 AVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTPM-------NR--KWMP------NADHSSWTPLSFISEHLLKWTTET  211 (235)
T ss_dssp             HHHHHHHHHHSTTSSCCTTCEEEEEEESCBCCHH-------HH--HHST------TCCGGGCBCHHHHHHHHHHHHHCG
T ss_pred             HHHHHHHHHHHHhccCCCceEEEEEecCcCcCcc-------hh--hhCc------CCccccCCCHHHHHHHHHHHhcCc
Confidence            777777665443     36788888998764431       11  1111      112234788999999998776543

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=99.50  E-value=2e-13  Score=114.18  Aligned_cols=168  Identities=14%  Similarity=0.093  Sum_probs=113.2

Q ss_pred             CEEEEEcCCchHHHHHHHHHHh---CCCeEEEEecCCchhhccCC---CCCCccCCCeeecCCcchhhhcC---------
Q 018503           51 MTVSVTGATGFIGRRLVQRLQA---DNHQVRVLTRSRSKAELIFP---GKKTRFFPGVMIAEEPQWRDCIQ---------  115 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~---~g~~V~~~~r~~~~~~~~~~---~~~~~~~~~~d~~~~~~~~~~~~---------  115 (355)
                      |+||||||++.||++++++|++   .|++|++.+|+.++...+..   .........+|+.|+++++++++         
T Consensus         3 KtilITGas~GIG~a~a~~l~~~a~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~~   82 (248)
T d1snya_           3 NSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFDAYDKLVADIEGVTKDQ   82 (248)
T ss_dssp             SEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTCGGGHHHHHHHHHHHHGGG
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHhcCCcEEEEEEEeccHHHHHHHHhhhHHHhhcC
Confidence            5899999999999999999974   68999999999876543321   11111134578889887765442         


Q ss_pred             CCcEEEECCCCCCC----CCCChhhHHHHHHHhhhhHHHHHHHHHcC-------------CCCCCcEEEEeeeeeeeeCC
Q 018503          116 GSTAVVNLAGTPIG----TRWSSEIKKEIKESRIRVTSKVVDLINES-------------PEGVRPSVLVSATALGYYGT  178 (355)
Q Consensus       116 ~~d~vi~~a~~~~~----~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-------------~~~~~~~v~~Ss~~~~~yg~  178 (355)
                      .+|++||+||....    .....+.....+++|+.++..+++++...             ..+..++|.+||.... .+ 
T Consensus        83 ~iDiLvnNAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~p~l~~~~~~~~~~~~~~~~g~ii~i~S~~g~-~~-  160 (248)
T d1snya_          83 GLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGS-IQ-  160 (248)
T ss_dssp             CCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGGGC-ST-
T ss_pred             CcceEEeeccccccCcccccCCHHHHHHHHHhccccHHHHHHHHHHHHHHhhhccccccccccccccccccccccc-cC-
Confidence            58999999997432    23345667789999999988887765321             0245678999886431 11 


Q ss_pred             CCCccccCCCCCCChh-HHHHHHHHHHHHhcc---CCCCeEEEEEecEEEeC
Q 018503          179 SETEVFDESSPSGNDY-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGK  226 (355)
Q Consensus       179 ~~~~~~~e~~~~~~~y-~~k~~~~~~~~~~~~---~~~~~~~i~Rp~~i~G~  226 (355)
                        .    ...+....| .+|.....+.+.+..   ..|+++..+.||.+-.+
T Consensus       161 --~----~~~~~~~~Y~aSKaal~~lt~~la~e~~~~gI~vn~v~PG~v~T~  206 (248)
T d1snya_         161 --G----NTDGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTD  206 (248)
T ss_dssp             --T----CCSCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCST
T ss_pred             --C----CCCCChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCCCcccCC
Confidence              0    111223367 777665555444332   34899999999988655

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.49  E-value=2.5e-13  Score=114.41  Aligned_cols=206  Identities=12%  Similarity=0.017  Sum_probs=134.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHh---CCCeEEEEecCCchhhccCCC------CCCccCCCeeecCCcchhhhcC----
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQA---DNHQVRVLTRSRSKAELIFPG------KKTRFFPGVMIAEEPQWRDCIQ----  115 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~---~g~~V~~~~r~~~~~~~~~~~------~~~~~~~~~d~~~~~~~~~~~~----  115 (355)
                      .++.++||||++.||++++++|.+   +|++|++++|+.+........      ........+|+.+++++.++++    
T Consensus         5 ~gKvalITGas~GIG~aiA~~lA~~~~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~l~~~~~~   84 (259)
T d1oaaa_           5 GCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAVRE   84 (259)
T ss_dssp             BSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHhcccCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHH
Confidence            456789999999999999999986   699999999988765443211      1111134578899887776652    


Q ss_pred             -------CCcEEEECCCCCCC------CCCChhhHHHHHHHhhhhHHHHHHHHHcC-C-CC--CCcEEEEeeeeeeeeCC
Q 018503          116 -------GSTAVVNLAGTPIG------TRWSSEIKKEIKESRIRVTSKVVDLINES-P-EG--VRPSVLVSATALGYYGT  178 (355)
Q Consensus       116 -------~~d~vi~~a~~~~~------~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~-~~--~~~~v~~Ss~~~~~yg~  178 (355)
                             ..|++||+||....      ...+.+.+...+++|+.++..+.+++... . .+  ..++|++||...  +. 
T Consensus        85 ~~~~~~~~~~~lvnnag~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~~~~~g~Iv~isS~~~--~~-  161 (259)
T d1oaaa_          85 LPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCA--LQ-  161 (259)
T ss_dssp             SCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGG--TS-
T ss_pred             hhhhccCceEEEEecccccccCCCCccccCCHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCCCcccccccccccc--cC-
Confidence                   35789999986422      23345677889999999999999887653 1 22  357899998765  21 


Q ss_pred             CCCccccCCCCCCChh-HHHHHHHHHHHHhcc-CCCCeEEEEEecEEEeCCCCc------ccchHHHHHHHhCCCCCCCC
Q 018503          179 SETEVFDESSPSGNDY-LAEVCREWEGTALKV-NKDVRLALIRIGIVLGKDGGA------LAKMIPLFMMFAGGPLGSGQ  250 (355)
Q Consensus       179 ~~~~~~~e~~~~~~~y-~~k~~~~~~~~~~~~-~~~~~~~i~Rp~~i~G~~~~~------~~~~~~~~~~~~~~~~~~~~  250 (355)
                              ..+....| .+|.....+.+.++. ..|+++..+.||.+..+....      .......+...  .+.    
T Consensus       162 --------~~~~~~~Y~asKaal~~lt~~la~e~~gIrVn~v~PG~i~T~~~~~~~~~~~~~~~~~~~~~~--~~~----  227 (259)
T d1oaaa_         162 --------PYKGWGLYCAGKAARDMLYQVLAAEEPSVRVLSYAPGPLDNDMQQLARETSKDPELRSKLQKL--KSD----  227 (259)
T ss_dssp             --------CCTTCHHHHHHHHHHHHHHHHHHHHCTTEEEEEEECCSBSSHHHHHHHHHCSCHHHHHHHHHH--HHT----
T ss_pred             --------CCccchHHHHHHHHHHHHHHHHHhCCCCCEEEEEEcCCCCCHHHHHhhhcCCCHHHHHHHHhc--CCC----
Confidence                    12234567 777666555544433 358999999999887542100      00011111000  011    


Q ss_pred             cceecccHHHHHHHHHHHHhCCC
Q 018503          251 QWFSWIHLDDIVNLIYEALSNPS  273 (355)
Q Consensus       251 ~~~~~i~v~Dva~~~~~~~~~~~  273 (355)
                        -.+...+|+|++++.++....
T Consensus       228 --~r~~~p~evA~~i~~ll~~~s  248 (259)
T d1oaaa_         228 --GALVDCGTSAQKLLGLLQKDT  248 (259)
T ss_dssp             --TCSBCHHHHHHHHHHHHHHCC
T ss_pred             --CCCCCHHHHHHHHHHHhhhcc
Confidence              125778999999999997543

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

Probab=99.48  E-value=1.3e-13  Score=116.19  Aligned_cols=220  Identities=14%  Similarity=0.055  Sum_probs=135.2

Q ss_pred             CCCEEEEEcCCc--hHHHHHHHHHHhCCCeEEEEecCCchhhccCC---CCCCccCCCeeecCCcchhhhc-------CC
Q 018503           49 SQMTVSVTGATG--FIGRRLVQRLQADNHQVRVLTRSRSKAELIFP---GKKTRFFPGVMIAEEPQWRDCI-------QG  116 (355)
Q Consensus        49 ~~~~IlVtGatG--~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~---~~~~~~~~~~d~~~~~~~~~~~-------~~  116 (355)
                      ++|+||||||+|  .||+++++.|+++|++|++.+|+++.......   ..........|+.+..+..+.+       ..
T Consensus         4 ~gK~~lITGass~~GIG~aiA~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (258)
T d1qsga_           4 SGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVWPK   83 (258)
T ss_dssp             TTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTCSS
T ss_pred             CCCEEEEECCCCchhHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHhhcCCcceeecccchHHHHHHHHHHhhhcccc
Confidence            458999999999  79999999999999999999998653322111   0000012223444444433333       35


Q ss_pred             CcEEEECCCCCCCCC--------CChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCCCCccccCCC
Q 018503          117 STAVVNLAGTPIGTR--------WSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESS  188 (355)
Q Consensus       117 ~d~vi~~a~~~~~~~--------~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~  188 (355)
                      .|++||+++......        ...+.....+..|+.+...+.+++.......+.++++||.... ++          .
T Consensus        84 ~d~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ii~iss~~~~-~~----------~  152 (258)
T d1qsga_          84 FDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAE-RA----------I  152 (258)
T ss_dssp             EEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGT-SB----------C
T ss_pred             cceEEEeecccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhccCCcEEEEecchhhc-cC----------C
Confidence            799999998743221        2223345667788888888888776531233457777775541 11          2


Q ss_pred             CCCChh-HHHHHHHHHHHHhcc---CCCCeEEEEEecEEEeCCCCcccchHHHH-HHHhCCCCCCCCcceecccHHHHHH
Q 018503          189 PSGNDY-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALAKMIPLF-MMFAGGPLGSGQQWFSWIHLDDIVN  263 (355)
Q Consensus       189 ~~~~~y-~~k~~~~~~~~~~~~---~~~~~~~i~Rp~~i~G~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~v~Dva~  263 (355)
                      +....| .+|...+.+.+.+..   .+|+++..++||.+..+............ ......|++      .+...+|+|+
T Consensus       153 ~~~~~Y~~sKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~pl~------R~~~peeia~  226 (258)
T d1qsga_         153 PNYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPIR------RTVTIEDVGN  226 (258)
T ss_dssp             TTTTHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTTS------SCCCHHHHHH
T ss_pred             CCcHHHHHHHHHHHHHHHHHHHHhCccCceeecccccccccccccccchhhhHHHHHHhCCCCC------CCcCHHHHHH
Confidence            234568 778766655544433   35899999999999876532221111111 112222322      2678999999


Q ss_pred             HHHHHHhCCC---CCCceEecCCCc
Q 018503          264 LIYEALSNPS---YRGVINGTAPNP  285 (355)
Q Consensus       264 ~~~~~~~~~~---~~~~~~i~~~~~  285 (355)
                      ++..++....   .+.++.+.+|..
T Consensus       227 ~v~fL~s~~s~~itG~~i~vDGG~~  251 (258)
T d1qsga_         227 SAAFLCSDLSAGISGEVVHVDGGFS  251 (258)
T ss_dssp             HHHHHTSGGGTTCCSCEEEESTTGG
T ss_pred             HHHHHhCchhcCccCceEEECcCHH
Confidence            9999997543   344677777643

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.48  E-value=2.7e-14  Score=121.48  Aligned_cols=199  Identities=15%  Similarity=0.031  Sum_probs=128.3

Q ss_pred             CCEE-EEEcCCchHHHHHHHHHHhC-CCeEEEEecCCchhhccC----CCCCCccCCCeeecCCcchhhhc-------CC
Q 018503           50 QMTV-SVTGATGFIGRRLVQRLQAD-NHQVRVLTRSRSKAELIF----PGKKTRFFPGVMIAEEPQWRDCI-------QG  116 (355)
Q Consensus        50 ~~~I-lVtGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~----~~~~~~~~~~~d~~~~~~~~~~~-------~~  116 (355)
                      +|+| +||||++.||.+++++|++. |++|++.+|+.++.+...    ..........+|+.|.+++++++       ..
T Consensus         2 g~rVAlVTGas~GIG~a~A~~la~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dvs~~~sv~~~~~~~~~~~g~   81 (275)
T d1wmaa1           2 GIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYGG   81 (275)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCeEEEECCCCCHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEEecCCHHHHHHHHHHHHHhcCC
Confidence            4666 89999999999999999986 899999999987654321    11111124457998888776555       36


Q ss_pred             CcEEEECCCCCCCCC---CChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCCCC------------
Q 018503          117 STAVVNLAGTPIGTR---WSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSET------------  181 (355)
Q Consensus       117 ~d~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~~------------  181 (355)
                      +|++|||||......   ...+.....+++|+.++..+++++...-....++|++||.... .+....            
T Consensus        82 iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~g~ivnisS~~~~-~~~~~~~~y~~~k~~~~~  160 (275)
T d1wmaa1          82 LDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIMSV-RALKSCSPELQQKFRSET  160 (275)
T ss_dssp             EEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHH-HHHHTSCHHHHHHHHCSS
T ss_pred             cEEEEEcCCcCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccccccee-ccccccchhhhhhhcccc
Confidence            899999999853322   2234556789999999999998886521123589999986431 110000            


Q ss_pred             -------------------ccccCCCCCCChh-HHHHHHHHHHHH----hc---cCCCCeEEEEEecEEEeCCCCcccch
Q 018503          182 -------------------EVFDESSPSGNDY-LAEVCREWEGTA----LK---VNKDVRLALIRIGIVLGKDGGALAKM  234 (355)
Q Consensus       182 -------------------~~~~e~~~~~~~y-~~k~~~~~~~~~----~~---~~~~~~~~i~Rp~~i~G~~~~~~~~~  234 (355)
                                         ........+...| .+|.....+...    +.   ...++.+..+.||.+-.+.....   
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aY~~sK~a~~~~t~~la~~l~~~~~~~~I~vn~v~PG~v~T~m~~~~---  237 (275)
T d1wmaa1         161 ITEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAGPK---  237 (275)
T ss_dssp             CCHHHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCSTTTCTT---
T ss_pred             cchhhhccccccchhcccccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecccccCCcccCc---
Confidence                               0011122234568 777655444332    21   12489999999998865421110   


Q ss_pred             HHHHHHHhCCCCCCCCcceecccHHHHHHHHHHHHhC
Q 018503          235 IPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSN  271 (355)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~  271 (355)
                                         .....+|.|+.++.++..
T Consensus       238 -------------------~~~~pee~A~~~~~~a~~  255 (275)
T d1wmaa1         238 -------------------ATKSPEEGAETPVYLALL  255 (275)
T ss_dssp             -------------------CSBCHHHHTHHHHHHHSC
T ss_pred             -------------------ccCCHHHHHHHHHHHHcC
Confidence                               123578999998887753

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.45  E-value=6.5e-13  Score=111.12  Aligned_cols=206  Identities=14%  Similarity=0.116  Sum_probs=128.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCC-CccCCCeeecCCcchhh-------hcCCCcEE
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKK-TRFFPGVMIAEEPQWRD-------CIQGSTAV  120 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~d~~~~~~~~~-------~~~~~d~v  120 (355)
                      ++|.++||||++.||.+++++|+++|++|++++|+.+.......... .......++.+.+.+++       .....|.+
T Consensus         4 kGKvalITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (248)
T d2o23a1           4 KGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVFAPADVTSEKDVQTALALAKGKFGRVDVA   83 (248)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCCccccccccccccccccccccccccccccccc
Confidence            45789999999999999999999999999999999876544322100 00012234444433322       22467888


Q ss_pred             EECCCCCCC---------CCCChhhHHHHHHHhhhhHHHHHHHHHcC--------CCCCCcEEEEeeeeeeeeCCCCCcc
Q 018503          121 VNLAGTPIG---------TRWSSEIKKEIKESRIRVTSKVVDLINES--------PEGVRPSVLVSATALGYYGTSETEV  183 (355)
Q Consensus       121 i~~a~~~~~---------~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--------~~~~~~~v~~Ss~~~~~yg~~~~~~  183 (355)
                      +++++....         .....+.+...+++|+.++..+.+++...        +.+..++|++||...  +.      
T Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~--~~------  155 (248)
T d2o23a1          84 VNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAA--FE------  155 (248)
T ss_dssp             EECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHH--HH------
T ss_pred             ccccccccCCCcccccccccchHHHHHHHHhHHHHHHHHHHHHhHHHHHHhhhhccCCceEEEEecchhh--cc------
Confidence            887765321         22344677889999999999888876331        123347999999765  21      


Q ss_pred             ccCCCCCCChh-HHHHHHHHHHHHhccC---CCCeEEEEEecEEEeCCCCccc-chHHHHHHHhCCCCCCCCcceecccH
Q 018503          184 FDESSPSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALA-KMIPLFMMFAGGPLGSGQQWFSWIHL  258 (355)
Q Consensus       184 ~~e~~~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~i~Rp~~i~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~v  258 (355)
                         ..+....| .+|...+.+.+.+..+   +|+++..+.||.+..+...... ....  ......++.     ..+...
T Consensus       156 ---~~~~~~~Y~asKaal~~lt~~la~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~--~~~~~~pl~-----~R~g~p  225 (248)
T d2o23a1         156 ---GQVGQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTSLPEKVCN--FLASQVPFP-----SRLGDP  225 (248)
T ss_dssp             ---CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC----------C--HHHHTCSSS-----CSCBCH
T ss_pred             ---CCCCchHHHHHHHHHHHHHHHHHHHhcccCcceeeeccCceecchhhcCCHHHHH--HHHhcCCCC-----CCCcCH
Confidence               12334568 7787666665555443   4899999999998765422110 1000  112222220     126789


Q ss_pred             HHHHHHHHHHHhCC
Q 018503          259 DDIVNLIYEALSNP  272 (355)
Q Consensus       259 ~Dva~~~~~~~~~~  272 (355)
                      +|+|++++.+++.+
T Consensus       226 eevA~~v~fL~s~~  239 (248)
T d2o23a1         226 AEYAHLVQAIIENP  239 (248)
T ss_dssp             HHHHHHHHHHHHCT
T ss_pred             HHHHHHHHHHHhCC
Confidence            99999999998753

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.42  E-value=3.4e-13  Score=114.14  Aligned_cols=201  Identities=14%  Similarity=0.049  Sum_probs=129.2

Q ss_pred             cCCCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCC-----CCCccCCCeeecCCcchhh-------hc
Q 018503           47 KASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-----KKTRFFPGVMIAEEPQWRD-------CI  114 (355)
Q Consensus        47 ~~~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-----~~~~~~~~~d~~~~~~~~~-------~~  114 (355)
                      +-+++++|||||++.||+++++.|+++|++|++++|+.++.......     .........|..+.+....       .+
T Consensus        11 ~L~GK~alITGassGIG~aiA~~la~~G~~Vil~~r~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~   90 (269)
T d1xu9a_          11 MLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLM   90 (269)
T ss_dssp             GGTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhhhhcccchhhhhhhhhHHHHHHHHHHHHHHh
Confidence            34568999999999999999999999999999999998765443211     0000011234434433332       23


Q ss_pred             CCCcEEEECCCCCCC---CCCChhhHHHHHHHhhhhHHHHHHHHHcC-CCCCCcEEEEeeeeeeeeCCCCCccccCCCCC
Q 018503          115 QGSTAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES-PEGVRPSVLVSATALGYYGTSETEVFDESSPS  190 (355)
Q Consensus       115 ~~~d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~  190 (355)
                      ..+|+++++|+....   ...+.+.....+++|+.++..+.+++... ..+..++|++||.+.  +-.         .+.
T Consensus        91 g~~~~li~nag~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~lp~m~~~~G~ii~isS~~~--~~~---------~p~  159 (269)
T d1xu9a_          91 GGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNGSIVVVSSLAG--KVA---------YPM  159 (269)
T ss_dssp             TSCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEGGG--TSC---------CTT
T ss_pred             CCccccccccccccccccccCCHHHhhhheeeehhhHHHHHHHHHHHHHhcCCcceEeccchh--cCC---------CCC
Confidence            468999999987533   23456667788999999988777665321 123468999999765  211         233


Q ss_pred             CChh-HHHHHHHHHHHHhcc-----CCCCeEEEEEecEEEeCCCCcccchHHHHHHHhCCCCCCCCcceecccHHHHHHH
Q 018503          191 GNDY-LAEVCREWEGTALKV-----NKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNL  264 (355)
Q Consensus       191 ~~~y-~~k~~~~~~~~~~~~-----~~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~  264 (355)
                      ...| .+|...+.+.+.++.     ..++++..+.||.+-.+.       ..  ...      .+.........+++|+.
T Consensus       160 ~~~Y~asKaal~~~~~~La~El~~~~~~I~V~~v~PG~v~T~~-------~~--~~~------~~~~~~~~~~~e~~a~~  224 (269)
T d1xu9a_         160 VAAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTET-------AM--KAV------SGIVHMQAAPKEECALE  224 (269)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCHH-------HH--HHS------CGGGGGGCBCHHHHHHH
T ss_pred             chHHHHHHHHHHHHHHHHHHHhhhcCCCEEEEEEecCcCCCcH-------HH--Hhc------cCCccccCCCHHHHHHH
Confidence            4567 778766655554433     347888999999875431       11  000      01112234668999999


Q ss_pred             HHHHHhCCC
Q 018503          265 IYEALSNPS  273 (355)
Q Consensus       265 ~~~~~~~~~  273 (355)
                      ++..+...+
T Consensus       225 i~~~~~~~~  233 (269)
T d1xu9a_         225 IIKGGALRQ  233 (269)
T ss_dssp             HHHHHHTTC
T ss_pred             HHHHhhcCC
Confidence            998877654

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=99.39  E-value=1.8e-12  Score=107.86  Aligned_cols=209  Identities=19%  Similarity=0.096  Sum_probs=130.3

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhc------CCCcEEEECC
Q 018503           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCI------QGSTAVVNLA  124 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~------~~~d~vi~~a  124 (355)
                      |++|||||++.||+++++.|+++|++|++++|+.+..+..        ....|+.+......+.      ...+.+++++
T Consensus         2 K~alITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~--------~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~   73 (241)
T d1uaya_           2 RSALVTGGASGLGRAAALALKARGYRVVVLDLRREGEDLI--------YVEGDVTREEDVRRAVARAQEEAPLFAVVSAA   73 (241)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCCSSSSE--------EEECCTTCHHHHHHHHHHHHHHSCEEEEEECC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcccccce--------EeeccccchhhhHHHHHhhhccccccchhhhh
Confidence            6899999999999999999999999999999987643321        2224554443333222      2345555555


Q ss_pred             CCCCC-------CCCChhhHHHHHHHhhhhHHHHHHHHHcC--------CCCCCcEEEEeeeeeeeeCCCCCccccCCCC
Q 018503          125 GTPIG-------TRWSSEIKKEIKESRIRVTSKVVDLINES--------PEGVRPSVLVSATALGYYGTSETEVFDESSP  189 (355)
Q Consensus       125 ~~~~~-------~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--------~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~  189 (355)
                      +....       .....+.+...+++|+.+...++..+...        ..+..++|++||.... .+          .+
T Consensus        74 ~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~-~~----------~~  142 (241)
T d1uaya_          74 GVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAF-EG----------QI  142 (241)
T ss_dssp             CCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHH-HC----------CT
T ss_pred             hccccccccccccchhHHHHHHHHHHHhhhhHHHHHHHHHHhhhhhhhcccCceeeeeecchhhc-cC----------CC
Confidence            43211       22345566788899999988777655321        1244579999997651 11          22


Q ss_pred             CCChh-HHHHHHHHHHHHhcc---CCCCeEEEEEecEEEeCCCCcccchHHHH-HHHhCCCCCCCCcceecccHHHHHHH
Q 018503          190 SGNDY-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALAKMIPLF-MMFAGGPLGSGQQWFSWIHLDDIVNL  264 (355)
Q Consensus       190 ~~~~y-~~k~~~~~~~~~~~~---~~~~~~~i~Rp~~i~G~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~v~Dva~~  264 (355)
                      ....| .+|.....+.+.+..   .+|+++..|.||.+..+.....  ..... ......++.     ..+...+|+|++
T Consensus       143 ~~~~Y~asKaal~~lt~~lA~ela~~gIrVN~V~PG~i~T~~~~~~--~~~~~~~~~~~~~~~-----~R~g~pedvA~~  215 (241)
T d1uaya_         143 GQAAYAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQGL--PEKAKASLAAQVPFP-----PRLGRPEEYAAL  215 (241)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHTS--CHHHHHHHHTTCCSS-----CSCCCHHHHHHH
T ss_pred             CchhhHHHHHHHHHHHHHHHHHHhhcCCceeeecCCcccccccchh--hhhHHHHHHhcCCCC-----CCCcCHHHHHHH
Confidence            34567 777766665554443   3589999999999865432111  11111 222222221     125678999999


Q ss_pred             HHHHHhCCC-CCCceEecCCCc
Q 018503          265 IYEALSNPS-YRGVINGTAPNP  285 (355)
Q Consensus       265 ~~~~~~~~~-~~~~~~i~~~~~  285 (355)
                      ++.++...- .+..+.+.+|..
T Consensus       216 v~fL~s~~~iTG~~i~VDGG~~  237 (241)
T d1uaya_         216 VLHILENPMLNGEVVRLDGALR  237 (241)
T ss_dssp             HHHHHHCTTCCSCEEEESTTCC
T ss_pred             HHHHHhCCCCCCCEEEECCccc
Confidence            999998543 344777777643

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

Probab=99.39  E-value=1.9e-12  Score=109.91  Aligned_cols=219  Identities=13%  Similarity=0.044  Sum_probs=121.3

Q ss_pred             CCCEEEEEcCCc--hHHHHHHHHHHhCCCeEEEEecCCchhhcc---CCCCCCccCCCeeecCCcchhhhc-------CC
Q 018503           49 SQMTVSVTGATG--FIGRRLVQRLQADNHQVRVLTRSRSKAELI---FPGKKTRFFPGVMIAEEPQWRDCI-------QG  116 (355)
Q Consensus        49 ~~~~IlVtGatG--~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~---~~~~~~~~~~~~d~~~~~~~~~~~-------~~  116 (355)
                      +.|++|||||+|  .||.+++++|+++|++|++++|++......   ............|+.+.+++.+++       ..
T Consensus         4 ~gK~alITGaag~~GIG~AiA~~la~~Ga~V~i~~r~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~g~   83 (274)
T d2pd4a1           4 KGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKDLGS   83 (274)
T ss_dssp             TTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTSC
T ss_pred             CCCEEEEECCCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhCCceeEeeecccchhhHHHHHHHHHHHcCC
Confidence            468999999988  699999999999999999999986432211   111111113345666666555444       47


Q ss_pred             CcEEEECCCCCCCC----CCChhhH---HHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCCCCccccCCCC
Q 018503          117 STAVVNLAGTPIGT----RWSSEIK---KEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSP  189 (355)
Q Consensus       117 ~d~vi~~a~~~~~~----~~~~~~~---~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~  189 (355)
                      +|++||+++.....    .......   ......+..+...+....... .+...+|+++++... .+         ..+
T Consensus        84 id~lV~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~s~~~~-~~---------~~~  152 (274)
T d2pd4a1          84 LDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPL-LNNGASVLTLSYLGS-TK---------YMA  152 (274)
T ss_dssp             EEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGG-EEEEEEEEEEECGGG-TS---------BCT
T ss_pred             CCeEEeecccccccccccccccccchhhhhhhccccccccccccccccc-cccCcceeeeccccc-cc---------ccc
Confidence            89999999974321    1111112   222233333344444433331 122233343333220 11         011


Q ss_pred             CCChh-HHHHHHHHHHHHhcc---CCCCeEEEEEecEEEeCCCCcccchHHHH-HHHhCCCCCCCCcceecccHHHHHHH
Q 018503          190 SGNDY-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALAKMIPLF-MMFAGGPLGSGQQWFSWIHLDDIVNL  264 (355)
Q Consensus       190 ~~~~y-~~k~~~~~~~~~~~~---~~~~~~~i~Rp~~i~G~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~v~Dva~~  264 (355)
                      ....| .+|.....+......   ..|+++..+.||.+..+........-... ......+.      ..+...+|+|.+
T Consensus       153 ~~~~y~asK~al~~ltr~lA~e~~~~GIrvN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~p~------~r~~~pedIA~~  226 (274)
T d2pd4a1         153 HYNVMGLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGIADFRMILKWNEINAPL------RKNVSLEEVGNA  226 (274)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTT------SSCCCHHHHHHH
T ss_pred             cchhhhHHHHHHHHHHHhhHHHhcCcCceecccccCcccCccccccCchHHHHHHHhhhhhc------cCCcCHHHHHHH
Confidence            22345 566554444333222   35899999999998776432211111111 11111122      236889999999


Q ss_pred             HHHHHhCCC---CCCceEecCCC
Q 018503          265 IYEALSNPS---YRGVINGTAPN  284 (355)
Q Consensus       265 ~~~~~~~~~---~~~~~~i~~~~  284 (355)
                      ++.++....   .+..+.+.+|.
T Consensus       227 v~fL~S~~s~~itG~~i~vDGG~  249 (274)
T d2pd4a1         227 GMYLLSSLSSGVSGEVHFVDAGY  249 (274)
T ss_dssp             HHHHHSGGGTTCCSCEEEESTTG
T ss_pred             HHHHhChhhCCCcCceEEECCCh
Confidence            999998643   34478787775

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=99.37  E-value=2.7e-11  Score=103.89  Aligned_cols=222  Identities=10%  Similarity=-0.012  Sum_probs=130.3

Q ss_pred             cCCCCEEEEEcCCc--hHHHHHHHHHHhCCCeEEEEecCCchh-------------hccCCCCCCc--------------
Q 018503           47 KASQMTVSVTGATG--FIGRRLVQRLQADNHQVRVLTRSRSKA-------------ELIFPGKKTR--------------   97 (355)
Q Consensus        47 ~~~~~~IlVtGatG--~iG~~l~~~L~~~g~~V~~~~r~~~~~-------------~~~~~~~~~~--------------   97 (355)
                      ..++|++|||||+|  .||+++++.|+++|.+|++.+|++...             ..........              
T Consensus         5 ~L~gK~alVTGass~~GIG~aiA~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (297)
T d1d7oa_           5 DLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLPDGSLMEIKKVYPLDAVFDN   84 (297)
T ss_dssp             CCTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGGGBCTTSSBCCEEEEEEECTTCCS
T ss_pred             CCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCchhhhhhHHHHHHhhhhhhhhhhhhhhhhhhhhhhhhhhccc
Confidence            34568999999987  899999999999999999998864211             0000000000              


Q ss_pred             -cCCCee--------ecCCcchhh-------hcCCCcEEEECCCCCCC-----CCCChhhHHHHHHHhhhhHHHHHHHHH
Q 018503           98 -FFPGVM--------IAEEPQWRD-------CIQGSTAVVNLAGTPIG-----TRWSSEIKKEIKESRIRVTSKVVDLIN  156 (355)
Q Consensus        98 -~~~~~d--------~~~~~~~~~-------~~~~~d~vi~~a~~~~~-----~~~~~~~~~~~~~~n~~~~~~l~~a~~  156 (355)
                       .....|        ..+.+.+.+       .+.++|++||+||....     .+.+.+.+...+++|+.+...+++++.
T Consensus        85 ~~~~~~dv~~~~~~~~~~~~~~~~~~~~~~~~~G~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~  164 (297)
T d1d7oa_          85 PEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHFL  164 (297)
T ss_dssp             GGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHG
T ss_pred             cccchhhhhhhhhhhhccHHHHHHHHHHHHHHhCCCcccccccccccccccchhhhhcccccccccchhhhhhhhhhHHH
Confidence             000001        112222222       23478999999986321     334667788999999999999998876


Q ss_pred             cCCCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCChh-HHHHHHHHHHH----HhccCCCCeEEEEEecEEEeCCCCcc
Q 018503          157 ESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-LAEVCREWEGT----ALKVNKDVRLALIRIGIVLGKDGGAL  231 (355)
Q Consensus       157 ~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~~y-~~k~~~~~~~~----~~~~~~~~~~~i~Rp~~i~G~~~~~~  231 (355)
                      ......+..+.+++.+.  ...        ..+....| .+|.....+..    .+...+|+++..+.||.+..+.....
T Consensus       165 ~~~~~~g~~~~~~~~~~--~~~--------~~~~~~~y~~aKaa~~~l~~~~a~e~~~~~gIrvN~I~PG~i~T~~~~~~  234 (297)
T d1d7oa_         165 PIMNPGGASISLTYIAS--ERI--------IPGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKAI  234 (297)
T ss_dssp             GGEEEEEEEEEEECGGG--TSC--------CTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBCCCSSCC
T ss_pred             HHhhcCCcceeeeehhh--ccc--------ccccccceecccccccccccccchhccccceEEecccccccccchhhhhc
Confidence            53122234555555443  110        01223346 55644433332    22223589999999999987754332


Q ss_pred             cchHHHH-HHHhCCCCCCCCcceecccHHHHHHHHHHHHhCCC---CCCceEecCCC
Q 018503          232 AKMIPLF-MMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPS---YRGVINGTAPN  284 (355)
Q Consensus       232 ~~~~~~~-~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~---~~~~~~i~~~~  284 (355)
                      ...-... ......|++      .+...+|+|++++.++....   .+..+.+.+|.
T Consensus       235 ~~~~~~~~~~~~~~Plg------R~~~peevA~~v~fL~S~~a~~itGq~i~vDGG~  285 (297)
T d1d7oa_         235 GFIDTMIEYSYNNAPIQ------KTLTADEVGNAAAFLVSPLASAITGATIYVDNGL  285 (297)
T ss_dssp             SHHHHHHHHHHHHSSSC------CCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTG
T ss_pred             cCCHHHHHHHHhCCCCC------CCCCHHHHHHHHHHHhCchhcCCcCceEEECcCH
Confidence            1111111 122222332      26789999999999997543   34467776663

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

Probab=99.33  E-value=3.4e-11  Score=102.57  Aligned_cols=216  Identities=11%  Similarity=0.027  Sum_probs=126.7

Q ss_pred             EEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhh-ccC-------CCC---------------CCccCCCeeecCCc
Q 018503           52 TVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAE-LIF-------PGK---------------KTRFFPGVMIAEEP  108 (355)
Q Consensus        52 ~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~~~-------~~~---------------~~~~~~~~d~~~~~  108 (355)
                      .++||||++.||+++++.|+++|++|++.+|+..... .+.       ...               .......+|+.+.+
T Consensus         4 VAlITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~dv~~~~   83 (284)
T d1e7wa_           4 VALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPVTLFT   83 (284)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CCCBCHHH
T ss_pred             EEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHHHHHHhhcCCceEEEEeecccccccccccccccccCCCHH
Confidence            6799999999999999999999999999887654321 110       000               00001235667777


Q ss_pred             chhhhc-------CCCcEEEECCCCCCCCCCCh-----------------hhHHHHHHHhhhhHHHHHHHHHcC------
Q 018503          109 QWRDCI-------QGSTAVVNLAGTPIGTRWSS-----------------EIKKEIKESRIRVTSKVVDLINES------  158 (355)
Q Consensus       109 ~~~~~~-------~~~d~vi~~a~~~~~~~~~~-----------------~~~~~~~~~n~~~~~~l~~a~~~~------  158 (355)
                      ++++++       .++|++||+||.........                 .....++.+|+.+...+.+++...      
T Consensus        84 ~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~  163 (284)
T d1e7wa_          84 RCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPA  163 (284)
T ss_dssp             HHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCG
T ss_pred             HHHHHHHHHHHHhCCCCEEEecCCccCCCchhhCCHHHhhhhhhhHHHHHHHHHHHHhhheeeeeeeeccccchhhhhHH
Confidence            666654       47899999999753321111                 112346788888888777764321      


Q ss_pred             --CCCCCcEEEEeeeeeeeeCCCCCccccCCCCCCChh-HHHHHHHHHHHHhcc---CCCCeEEEEEecEEEeCCCCccc
Q 018503          159 --PEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALA  232 (355)
Q Consensus       159 --~~~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~~~~~y-~~k~~~~~~~~~~~~---~~~~~~~i~Rp~~i~G~~~~~~~  232 (355)
                        ..+...++++++...  .         ...+....| .+|.....+.+.+..   ..|+++..+.||..-.....   
T Consensus       164 ~~~~~~~~ii~~~s~~~--~---------~~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~t~~~~~~---  229 (284)
T d1e7wa_         164 KHRGTNYSIINMVDAMT--N---------QPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVDDM---  229 (284)
T ss_dssp             GGSCSCEEEEEECCTTT--T---------SCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCGGGS---
T ss_pred             HhcCCCCcccccccccc--c---------CCccceeeeccccccchhhhHHHHHHhCCccccccccccccccccccC---
Confidence              022334555555432  1         112223567 777666555544433   34899999999863221111   


Q ss_pred             chHHHH-HHHhCCCCCCCCcceecccHHHHHHHHHHHHhCCC---CCCceEecCCCccC
Q 018503          233 KMIPLF-MMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPS---YRGVINGTAPNPVR  287 (355)
Q Consensus       233 ~~~~~~-~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~---~~~~~~i~~~~~~s  287 (355)
                       ..... ......++.     ..+...+|+|++++.++....   .+..+.+.+|..++
T Consensus       230 -~~~~~~~~~~~~pl~-----~R~~~peeiA~~v~fL~S~~s~~itG~~i~VDGG~sl~  282 (284)
T d1e7wa_         230 -PPAVWEGHRSKVPLY-----QRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYSLT  282 (284)
T ss_dssp             -CHHHHHHHHTTCTTT-----TSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred             -CHHHHHHHHhcCCCC-----CCCCCHHHHHHHHHHHhCchhcCccCCeEEECcChhcc
Confidence             01111 222222220     126789999999999997543   44478888776554

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

Probab=99.30  E-value=2.9e-11  Score=102.08  Aligned_cols=222  Identities=13%  Similarity=0.016  Sum_probs=129.1

Q ss_pred             CCCCEEEEEcCCc--hHHHHHHHHHHhCCCeEEEEecCCchhhc-cCC-CCCCccCCCeeecCCcchhhh-------c--
Q 018503           48 ASQMTVSVTGATG--FIGRRLVQRLQADNHQVRVLTRSRSKAEL-IFP-GKKTRFFPGVMIAEEPQWRDC-------I--  114 (355)
Q Consensus        48 ~~~~~IlVtGatG--~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-~~~-~~~~~~~~~~d~~~~~~~~~~-------~--  114 (355)
                      ..+|+++||||+|  .||++++++|+++|++|+..+|+..+... ... .........+|+.+.+++.++       +  
T Consensus         4 l~gK~~lItGaag~~GIG~aiA~~la~~Ga~Vil~~~~~~~~~~~~~~~~~~~~~~~~~dv~~~~~~~~~~~~v~~~~~~   83 (268)
T d2h7ma1           4 LDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRLPAKAPLLELDVQNEEHLASLAGRVTEAIGA   83 (268)
T ss_dssp             TTTCEEEECCCSSTTCHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTTSSSCCCEEECCTTCHHHHHHHHHHHHHHHCT
T ss_pred             CCCCEEEEECCCCCCHHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHcCCceeeEeeecccccccccccchhhhcccc
Confidence            3568999999766  49999999999999999999998765422 211 111112335677776544433       2  


Q ss_pred             -CCCcEEEECCCCCCC--------CCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeeeeeeeCCCCCcccc
Q 018503          115 -QGSTAVVNLAGTPIG--------TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFD  185 (355)
Q Consensus       115 -~~~d~vi~~a~~~~~--------~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~~~~yg~~~~~~~~  185 (355)
                       ..+|+++|+++....        .+.........+..|.........+.... ......++++|...  ..        
T Consensus        84 ~~~ld~~i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~s~~~--~~--------  152 (268)
T d2h7ma1          84 GNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPI-MNPGGSIVGMDFDP--SR--------  152 (268)
T ss_dssp             TCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGG-EEEEEEEEEEECCC--SS--------
T ss_pred             CCCcceeeecccccCccccccccccccchhhhhhhhhhhhhHHHHHHHHHhhh-cccccccccccccc--cc--------
Confidence             246999999996421        11223444556667777777666666552 12223444444332  11        


Q ss_pred             CCCCCCChh-HHHHHHHHHHHHhcc---CCCCeEEEEEecEEEeCCC--------Cc-ccchHHHH--HHHhCCCCCCCC
Q 018503          186 ESSPSGNDY-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDG--------GA-LAKMIPLF--MMFAGGPLGSGQ  250 (355)
Q Consensus       186 e~~~~~~~y-~~k~~~~~~~~~~~~---~~~~~~~i~Rp~~i~G~~~--------~~-~~~~~~~~--~~~~~~~~~~~~  250 (355)
                       ..|....| .+|...+.+.+.+..   ..|+++..|.||.+-.+..        .. .......+  ......|++   
T Consensus       153 -~~p~~~~y~~sK~a~~~ltr~lA~e~~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~---  228 (268)
T d2h7ma1         153 -AMPAYNWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQRAPIG---  228 (268)
T ss_dssp             -CCTTTHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHHHHHHHTTTTCHHHHHHHHHHHHHHHHHCTTC---
T ss_pred             -cCcccchhhccccchhhccccchhhhhccCCcceEEecCCCCChhhhhhccchhhhhhccchHHHHHHHHhcCCCC---
Confidence             11223456 667665555544433   3589999999998865421        10 00111111  111111211   


Q ss_pred             cceecccHHHHHHHHHHHHhCCC---CCCceEecCCCcc
Q 018503          251 QWFSWIHLDDIVNLIYEALSNPS---YRGVINGTAPNPV  286 (355)
Q Consensus       251 ~~~~~i~v~Dva~~~~~~~~~~~---~~~~~~i~~~~~~  286 (355)
                        +.+...+|+|+++..++....   .+.++.+.+|...
T Consensus       229 --rr~~~p~dva~~v~fL~Sd~a~~iTG~~i~vDGG~~~  265 (268)
T d2h7ma1         229 --WNMKDATPVAKTVCALLSDWLPATTGDIIYADGGAHT  265 (268)
T ss_dssp             --CCTTCCHHHHHHHHHHHSSSCTTCCSEEEEESTTGGG
T ss_pred             --CCCCCHHHHHHHHHHHhCchhcCccCCEEEECcCccc
Confidence              236778999999999997543   3446777777544

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=99.20  E-value=7.1e-11  Score=98.98  Aligned_cols=209  Identities=13%  Similarity=0.052  Sum_probs=112.4

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcch--------hhhcCCCcEEEE
Q 018503           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQW--------RDCIQGSTAVVN  122 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~--------~~~~~~~d~vi~  122 (355)
                      |.|+||||++.||++++++|++.|++|++++|+..+..             .|+.+.+..        .+....+|++++
T Consensus         2 kVvlITGas~GIG~aiA~~la~~Ga~V~~~~~~~~~~~-------------~d~~~~~~~~~~~~~~~~~~~~~id~lv~   68 (257)
T d1fjha_           2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEVI-------------ADLSTAEGRKQAIADVLAKCSKGMDGLVL   68 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEE-------------CCTTSHHHHHHHHHHHHTTCTTCCSEEEE
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECChHHHH-------------HHhcCHHHHHHHHHHHHHHhCCCCcEEEE
Confidence            57899999999999999999999999999999764321             133322221        122235899999


Q ss_pred             CCCCCCCCCCChhhHHHHHHHhhhhHHHHHHHHHcC--CCCCCcEEEEeeeeeeeeCCCCCccc----------------
Q 018503          123 LAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVF----------------  184 (355)
Q Consensus       123 ~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~~~~v~~Ss~~~~~yg~~~~~~~----------------  184 (355)
                      +|+....    .+.......+|..+...+.+.....  .........+++.... +-.....+.                
T Consensus        69 ~Ag~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~i~s~~  143 (257)
T d1fjha_          69 CAGLGPQ----TKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASA-HLAFDKNPLALALEAGEEAKARAIV  143 (257)
T ss_dssp             CCCCCTT----CSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGG-SSCGGGCTTHHHHHHTCHHHHHHHH
T ss_pred             cCCCCCc----HHHHHHHHHHHHHHHHHHHHHhhhhhhhhccCcceeeeecccc-chhhhhhhhhhhccCCcEEEEeeeh
Confidence            9986422    2233455667777766665543221  0334445555543321 100000000                


Q ss_pred             cC--CCCCCChh-HHHHHHHHHHHHhcc---CCCCeEEEEEecEEEeCCCCcccchHHHH-HHHhC-CCCCCCCcceecc
Q 018503          185 DE--SSPSGNDY-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALAKMIPLF-MMFAG-GPLGSGQQWFSWI  256 (355)
Q Consensus       185 ~e--~~~~~~~y-~~k~~~~~~~~~~~~---~~~~~~~i~Rp~~i~G~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~i  256 (355)
                      ..  ..+....| .+|...+.+.+.+..   .+|+++..|.||.+-.+.......--... ...+. .|+      --+.
T Consensus       144 ~~~~~~~~~~~Y~asKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~Pl------gR~g  217 (257)
T d1fjha_         144 EHAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQDPRYGESIAKFVPPM------GRRA  217 (257)
T ss_dssp             HTCCTTHHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC---------------------CCCST------TSCC
T ss_pred             hccCCCcchHHHHHHhhhhhccccccccccccccccccccccCCcCChhHHhhcCCHHHHHHHHhcCCCC------CCCc
Confidence            00  00011247 677666665555443   35899999999999765421110000000 00111 111      2367


Q ss_pred             cHHHHHHHHHHHHhCCC---CCCceEecCC
Q 018503          257 HLDDIVNLIYEALSNPS---YRGVINGTAP  283 (355)
Q Consensus       257 ~v~Dva~~~~~~~~~~~---~~~~~~i~~~  283 (355)
                      ..+|+|+++..++....   .+..+.+.+|
T Consensus       218 ~p~eva~~v~fL~S~~s~~itG~~i~vDGG  247 (257)
T d1fjha_         218 EPSEMASVIAFLMSPAASYVHGAQIVIDGG  247 (257)
T ss_dssp             CTHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             CHHHHHHHHHHHhCchhCCccCceEEeCCC
Confidence            88999999999997543   3446767665

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=99.19  E-value=2.4e-10  Score=96.18  Aligned_cols=216  Identities=15%  Similarity=0.067  Sum_probs=120.5

Q ss_pred             EEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhc-cC----CC-CCCccCCCeeecC----Ccchhh-------hc
Q 018503           52 TVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAEL-IF----PG-KKTRFFPGVMIAE----EPQWRD-------CI  114 (355)
Q Consensus        52 ~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-~~----~~-~~~~~~~~~d~~~----~~~~~~-------~~  114 (355)
                      ..|||||++.||++++++|+++|++|++++|+.++..+ +.    .. .........+..+    .+.+.+       .+
T Consensus         3 vAlVTGas~GIG~aia~~la~~G~~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (266)
T d1mxha_           3 AAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCSFRAF   82 (266)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHHHHHH
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHHHhhcCCceEEEecccccchhHHHHHHHHHHHHHHHh
Confidence            58999999999999999999999999999998765321 11    00 0000011112221    222322       23


Q ss_pred             CCCcEEEECCCCCCCCCCC--------------hhhHHHHHHHhhhhHHHHHHHHHcCC-------CCCCcEEEEeeeee
Q 018503          115 QGSTAVVNLAGTPIGTRWS--------------SEIKKEIKESRIRVTSKVVDLINESP-------EGVRPSVLVSATAL  173 (355)
Q Consensus       115 ~~~d~vi~~a~~~~~~~~~--------------~~~~~~~~~~n~~~~~~l~~a~~~~~-------~~~~~~v~~Ss~~~  173 (355)
                      ..+|++||+||......+.              ......++..|...............       .....++.+++...
T Consensus        83 g~iDilvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  162 (266)
T d1mxha_          83 GRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAMT  162 (266)
T ss_dssp             SCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEEEEECCGGG
T ss_pred             CCCCEEEECCccCCCCcccccccccchhcccccccccccccccccccccchhhhhccccccccccccccccchhhhhccc
Confidence            4799999999975332111              12233445556555554444433310       11223333433322


Q ss_pred             eeeCCCCCccccCCCCCCChh-HHHHHHHHHHHHhcc---CCCCeEEEEEecEEEeCCCCcccchHHHHHHHhCCCCCCC
Q 018503          174 GYYGTSETEVFDESSPSGNDY-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSG  249 (355)
Q Consensus       174 ~~yg~~~~~~~~e~~~~~~~y-~~k~~~~~~~~~~~~---~~~~~~~i~Rp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~  249 (355)
                                 ....+....| .+|...+.+.+.+..   ..|+++..|.||.+..+.... .....  ......+++  
T Consensus       163 -----------~~~~~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~t~~~~~-~~~~~--~~~~~~pl~--  226 (266)
T d1mxha_         163 -----------DLPLPGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLPPAMP-QETQE--EYRRKVPLG--  226 (266)
T ss_dssp             -----------GSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCCSSSC-HHHHH--HHHTTCTTT--
T ss_pred             -----------cccCcchhhhhhhHHHHhhhHHHHHHHhCccCcEEEEeccCcEeccccCC-HHHHH--HHHhcCCCC--
Confidence                       1112234456 677666655544433   358999999999876553221 11111  222222322  


Q ss_pred             CcceecccHHHHHHHHHHHHhCCC---CCCceEecCCCcc
Q 018503          250 QQWFSWIHLDDIVNLIYEALSNPS---YRGVINGTAPNPV  286 (355)
Q Consensus       250 ~~~~~~i~v~Dva~~~~~~~~~~~---~~~~~~i~~~~~~  286 (355)
                         +-+...+|+|++++.++....   .+..+.+.+|..+
T Consensus       227 ---r~~~~peeva~~v~fL~s~~s~~itG~~i~vDGG~~l  263 (266)
T d1mxha_         227 ---QSEASAAQIADAIAFLVSKDAGYITGTTLKVDGGLIL  263 (266)
T ss_dssp             ---SCCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             ---CCCCCHHHHHHHHHHHhCchhCCccCCeEEECccHhh
Confidence               224679999999999998653   3447888777543

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=99.12  E-value=4.8e-10  Score=97.20  Aligned_cols=164  Identities=12%  Similarity=0.032  Sum_probs=103.7

Q ss_pred             CEEEEEc--CCchHHHHHHHHHHhCCCeEEEEecCCchhhcc------------CCCCCCc-------------------
Q 018503           51 MTVSVTG--ATGFIGRRLVQRLQADNHQVRVLTRSRSKAELI------------FPGKKTR-------------------   97 (355)
Q Consensus        51 ~~IlVtG--atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~------------~~~~~~~-------------------   97 (355)
                      +..||||  ++..||+++++.|.++|.+|+...++.......            .......                   
T Consensus         3 kVAlITGaa~s~GIG~aiA~~la~~GA~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (329)
T d1uh5a_           3 DICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTANDI   82 (329)
T ss_dssp             CEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHTTTTTGGGEETTTEECCEEEEEECCTTCSSGGGC
T ss_pred             cEEEEeCCCCCChHHHHHHHHHHHcCCEEEEEeCchhhhhhhHHHHHHhhhhHHHHHHHhhhhhhhcccccceehhhccc
Confidence            6789999  556999999999999999999987764321100            0000000                   


Q ss_pred             -----cCCCeeecCCcchhhhc-------CCCcEEEECCCCCCC-----CCCChhhHHHHHHHhhhhHHHHHHHHHcCCC
Q 018503           98 -----FFPGVMIAEEPQWRDCI-------QGSTAVVNLAGTPIG-----TRWSSEIKKEIKESRIRVTSKVVDLINESPE  160 (355)
Q Consensus        98 -----~~~~~d~~~~~~~~~~~-------~~~d~vi~~a~~~~~-----~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~  160 (355)
                           ....+|+.+.+.+++++       .++|++||+||....     .+...+.+...+++|+.+...+++++...-.
T Consensus        83 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~k~~~~~m~  162 (329)
T d1uh5a_          83 DEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNIMK  162 (329)
T ss_dssp             CHHHHTSHHHHTCCCCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEE
T ss_pred             chhhhhhhhhhhhhHHHHHHHHHHHHHHhCCCCeeccccccccccCCChhhhhhhhhhhhcccchhHHHHHHHHHHhhcc
Confidence                 00012344555444433       478999999986422     2345677888999999999888888766312


Q ss_pred             CCCcEEEEeeeeeeeeCCCCCccccCCCC-CCChh-HHHHHHHHHHHHhcc----CCCCeEEEEEecEEEe
Q 018503          161 GVRPSVLVSATALGYYGTSETEVFDESSP-SGNDY-LAEVCREWEGTALKV----NKDVRLALIRIGIVLG  225 (355)
Q Consensus       161 ~~~~~v~~Ss~~~~~yg~~~~~~~~e~~~-~~~~y-~~k~~~~~~~~~~~~----~~~~~~~i~Rp~~i~G  225 (355)
                      ...++|.+||.+.  ..   .      .| +...| .+|...+.+.+.+..    ++|+++..|.||.+--
T Consensus       163 ~~GsIv~iss~~~--~~---~------~p~y~~~y~asKaal~~ltr~lA~Ela~~~gIRVNaI~PG~i~T  222 (329)
T d1uh5a_         163 PQSSIISLTYHAS--QK---V------VPGYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKS  222 (329)
T ss_dssp             EEEEEEEEECGGG--TS---C------CTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCC
T ss_pred             cccccccceeehh--cc---c------ccccchhhhhhhccccccchhhHHHHhcccCcEEEEEecCcccc
Confidence            3357888887654  11   1      11 12346 677665555544332    3589999999997743

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

Probab=99.04  E-value=3.3e-11  Score=96.16  Aligned_cols=79  Identities=16%  Similarity=0.176  Sum_probs=63.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCC---CccCCCeeecCCcchhhhcCCCcEEEECCC
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKK---TRFFPGVMIAEEPQWRDCIQGSTAVVNLAG  125 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~---~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~  125 (355)
                      +.++|+||||+|.||+.+++.|++.|++|++++|+.++.........   ......+|+.+.+++.+++.++|+|||+||
T Consensus        22 ~gK~vlItGasgGIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~iDilin~Ag  101 (191)
T d1luaa1          22 KGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAETADDASRAEAVKGAHFVFTAGA  101 (191)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCSHHHHHHHTTTCSEEEECCC
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHhhccchhhcccchHHHHHHHHHHHhccchhhhhhhcccHHHHHHHhcCcCeeeecCc
Confidence            46899999999999999999999999999999999876543322100   001334788899999999999999999998


Q ss_pred             CC
Q 018503          126 TP  127 (355)
Q Consensus       126 ~~  127 (355)
                      ..
T Consensus       102 ~g  103 (191)
T d1luaa1         102 IG  103 (191)
T ss_dssp             TT
T ss_pred             cc
Confidence            63

>d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=98.66  E-value=9.9e-08  Score=71.28  Aligned_cols=114  Identities=16%  Similarity=0.178  Sum_probs=78.5

Q ss_pred             EEEEEcCCchHHHHHHHHHHhCCC--eEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcCCCcEEEECCCCCCC
Q 018503           52 TVSVTGATGFIGRRLVQRLQADNH--QVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTPIG  129 (355)
Q Consensus        52 ~IlVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~~~~  129 (355)
                      ||.|+||+|.+|++++-.|..+|.  ++..++.+..+...+...........-......+..+.++++|+||.+||.+..
T Consensus         2 Kv~IiGA~G~VG~~~A~~l~~~~~~~elvLiDi~~~~~~a~Dl~~~~~~~~~~~~~~~~~~~~~~~~aDivVitag~~~~   81 (144)
T d1mlda1           2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVAADLSHIETRATVKGYLGPEQLPDCLKGCDVVVIPAGVPRK   81 (144)
T ss_dssp             EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHHHHHHTTSSSSCEEEEEESGGGHHHHHTTCSEEEECCSCCCC
T ss_pred             eEEEECCCChHHHHHHHHHHhCCccceEEEEeccccchhhHHHhhhhhhcCCCeEEcCCChHHHhCCCCEEEECCCcCCC
Confidence            799999999999999999998874  788888876554332211110001112234566777888999999999997532


Q ss_pred             CCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEee
Q 018503          130 TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSA  170 (355)
Q Consensus       130 ~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss  170 (355)
                      .   .....+.+..|....+.+++.+.+  .+.+.++.+-|
T Consensus        82 ~---g~sR~~ll~~N~~i~~~i~~~i~~--~~p~~iiivvt  117 (144)
T d1mlda1          82 P---GMTRDDLFNTNATIVATLTAACAQ--HCPDAMICIIS  117 (144)
T ss_dssp             T---TCCGGGGHHHHHHHHHHHHHHHHH--HCTTSEEEECS
T ss_pred             C---CCCcchHHHHHHHHHHHHHHHHHh--cCCCeEEEEec
Confidence            2   223346788999999999999988  44444555443

>d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: MJ0490, lactate/malate dehydrogenase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=98.43  E-value=1.5e-06  Score=64.64  Aligned_cols=102  Identities=20%  Similarity=0.284  Sum_probs=69.8

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhCC--CeEEEEecCCchh--h----ccCCCCCCccCCCeee--cCCcchhhhcCCCcEE
Q 018503           51 MTVSVTGATGFIGRRLVQRLQADN--HQVRVLTRSRSKA--E----LIFPGKKTRFFPGVMI--AEEPQWRDCIQGSTAV  120 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~--~----~~~~~~~~~~~~~~d~--~~~~~~~~~~~~~d~v  120 (355)
                      |||.|+||+|.+|++++..|+.++  .++..+++.++..  +    .+..... ......++  ...+. .+.++++|+|
T Consensus         1 MKV~IiGA~G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~~~g~a~Dl~~~~~-~~~~~~~~~~~~~~d-~~~l~~aDvV   78 (145)
T d1hyea1           1 MKVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALA-GTRSDANIYVESDEN-LRIIDESDVV   78 (145)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHT-TSCCCCEEEEEETTC-GGGGTTCSEE
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCcccccccccchhhhHhhhcccccchhccc-ccccCCccccCCcch-HHHhccceEE
Confidence            789999999999999999999988  4899999875321  1    1110000 00112222  22223 3567899999


Q ss_pred             EECCCCCCCCCCChhhHHHHHHHhhhhHHHHHHHHHc
Q 018503          121 VNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINE  157 (355)
Q Consensus       121 i~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~  157 (355)
                      |.+||.+..   ...+..+.+..|..-.+.+.+.+.+
T Consensus        79 VitAG~~~~---~g~sR~dl~~~Na~iv~~i~~~i~~  112 (145)
T d1hyea1          79 IITSGVPRK---EGMSRMDLAKTNAKIVGKYAKKIAE  112 (145)
T ss_dssp             EECCSCCCC---TTCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEecccccC---CCCChhhhhhhhHHHHHHHHHHHhc
Confidence            999997532   2234567888999999999999887

>d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=98.38  E-value=9.3e-07  Score=65.87  Aligned_cols=101  Identities=16%  Similarity=0.174  Sum_probs=67.4

Q ss_pred             CEEEEEcCCchHHHHHHHHHHh-C--CCeEEEEecCCchhh---ccCCCCCCccCCCee-ecCCcchhhhcCCCcEEEEC
Q 018503           51 MTVSVTGATGFIGRRLVQRLQA-D--NHQVRVLTRSRSKAE---LIFPGKKTRFFPGVM-IAEEPQWRDCIQGSTAVVNL  123 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~-~--g~~V~~~~r~~~~~~---~~~~~~~~~~~~~~d-~~~~~~~~~~~~~~d~vi~~  123 (355)
                      |||.|+|++|.+|++++-.|.. .  ..++..++..+....   .+.....   ..... +...+.. +.+++.|+||.+
T Consensus         1 MKV~IiGaaG~VG~~~a~~l~~~~~~~~el~L~D~~~~~~g~a~Dl~h~~~---~~~~~~~~~~~~~-~~~~~aDvvvit   76 (145)
T d2cmda1           1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPVTPGVAVDLSHIPT---AVKIKGFSGEDAT-PALEGADVVLIS   76 (145)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHSCTTCEEEEECSSTTHHHHHHHHHTSCS---SCEEEEECSSCCH-HHHTTCSEEEEC
T ss_pred             CEEEEEcCCChHHHHHHHHHHhCCCCCcEEEEecccccchhHHHHHHCCcc---ccCCcEEEcCCCc-cccCCCCEEEEC
Confidence            7999999999999999988764 3  478999987543211   1111100   11111 2233344 467899999999


Q ss_pred             CCCCCCCCCChhhHHHHHHHhhhhHHHHHHHHHcC
Q 018503          124 AGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINES  158 (355)
Q Consensus       124 a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~  158 (355)
                      ||.+....   ..-.+++..|..-.+.+.+.+.+.
T Consensus        77 aG~~~k~g---~~R~dl~~~N~~i~~~v~~~i~~~  108 (145)
T d2cmda1          77 AGVRRKPG---MDRSDLFNVNAGIVKNLVQQVAKT  108 (145)
T ss_dssp             CSCCCCTT---CCGGGGHHHHHHHHHHHHHHHHHH
T ss_pred             CCccCCCC---cchhhHHHHHHHHHHHHHHHHHhh
Confidence            99753322   233467789999999999999883

>d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Lactobacillus pentosus [TaxId: 1589]

Probab=98.38  E-value=3.1e-07  Score=68.75  Aligned_cols=113  Identities=15%  Similarity=0.234  Sum_probs=69.7

Q ss_pred             cCCCCEEEEEcCCchHHHHHHHHHHhCC--CeEEEEecCCchhhccC----CCCCCccCCCeeecCCcchhhhcCCCcEE
Q 018503           47 KASQMTVSVTGATGFIGRRLVQRLQADN--HQVRVLTRSRSKAELIF----PGKKTRFFPGVMIAEEPQWRDCIQGSTAV  120 (355)
Q Consensus        47 ~~~~~~IlVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~----~~~~~~~~~~~d~~~~~~~~~~~~~~d~v  120 (355)
                      |..+|||.|+|+ |++|..++..|+.+|  .+|..+++++...+...    .... ..... .+. ..+. +.++++|+|
T Consensus         2 m~~~~KI~IIGa-G~VG~~~A~~l~~~~~~~elvL~D~~~~~~~g~a~Dl~~a~~-~~~~~-~~~-~~d~-~~~~~adiv   76 (146)
T d1ez4a1           2 MPNHQKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQA-FTAPK-KIY-SGEY-SDCKDADLV   76 (146)
T ss_dssp             BTTBCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGG-GSCCC-EEE-ECCG-GGGTTCSEE
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhcCCCcEEEEeecccchhHHHHHHHhcccc-ccCCc-eEe-eccH-HHhccccEE
Confidence            345689999995 999999999999987  69999999875432110    0000 00111 111 1122 346799999


Q ss_pred             EECCCCCCCCCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEe
Q 018503          121 VNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVS  169 (355)
Q Consensus       121 i~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~S  169 (355)
                      |.+||.+..   ......+....|+...+.+.+.+.+  .+.+.++.+-
T Consensus        77 vitag~~~~---~g~~r~~l~~~N~~i~~~~~~~i~~--~~p~aivivv  120 (146)
T d1ez4a1          77 VITAGAPQK---PGESRLDLVNKNLNILSSIVKPVVD--SGFDGIFLVA  120 (146)
T ss_dssp             EECCCC-------------CHHHHHHHHHHHHHHHHH--TTCCSEEEEC
T ss_pred             EEecccccC---CCCCHHHHHHHHHHHHHHHHHHHhh--cCCCcEEEEe
Confidence            999986422   2233456778899999999999988  4445555443

>d1t4ba1 c.2.1.3 (A:1-133,A:355-367) Aspartate beta-semialdehyde dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=98.31  E-value=2e-06  Score=64.03  Aligned_cols=69  Identities=16%  Similarity=0.208  Sum_probs=43.0

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhCC----CeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcCCCcEEEECCC
Q 018503           51 MTVSVTGATGFIGRRLVQRLQADN----HQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG  125 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~g----~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~  125 (355)
                      +||.|+||||++|+.+++.|+++.    .+++++.++..........     .......+..+. ..++++|++|.+++
T Consensus         2 kkVaIvGATG~VGqeli~~Ll~~~~~p~~~l~~~~ss~s~g~~~~~~-----~~~~~~~~~~~~-~~~~~~DivF~a~~   74 (146)
T d1t4ba1           2 QNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQLGQAAPSFG-----GTTGTLQDAFDL-EALKALDIIVTCQG   74 (146)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSSTTSBCCGGG-----TCCCBCEETTCH-HHHHTCSEEEECSC
T ss_pred             cEEEEECCccHHHHHHHHHHHhCCCCCeeEEEEeecccccccccccc-----CCceeeecccch-hhhhcCcEEEEecC
Confidence            589999999999999999888763    3677776665443322111     001111111111 23568999999985

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=98.29  E-value=8.3e-07  Score=65.44  Aligned_cols=73  Identities=14%  Similarity=0.248  Sum_probs=55.2

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhh-cCCCcEEEECCC
Q 018503           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDC-IQGSTAVVNLAG  125 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~-~~~~d~vi~~a~  125 (355)
                      |+|+|+|+ |.+|+++++.|.+.|++|++++++++........... .....|..|++.+.++ ++++|+++-+..
T Consensus         1 M~IvI~G~-G~~G~~la~~L~~~g~~v~vid~d~~~~~~~~~~~~~-~vi~Gd~~~~~~l~~~~i~~a~~vv~~t~   74 (132)
T d1lssa_           1 MYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEIDA-LVINGDCTKIKTLEDAGIEDADMYIAVTG   74 (132)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCSS-EEEESCTTSHHHHHHTTTTTCSEEEECCS
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCCcceecCChhhhhhhhhhhhh-hhccCcccchhhhhhcChhhhhhhcccCC
Confidence            79999996 9999999999999999999999998765543221110 0223477788888776 468999998753

>d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=98.28  E-value=5e-07  Score=68.45  Aligned_cols=104  Identities=15%  Similarity=0.190  Sum_probs=66.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCC-------eEEEEecCC--chhhccC---CCCCCccCCCeeecCCcchhhhcCC
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNH-------QVRVLTRSR--SKAELIF---PGKKTRFFPGVMIAEEPQWRDCIQG  116 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~-------~V~~~~r~~--~~~~~~~---~~~~~~~~~~~d~~~~~~~~~~~~~  116 (355)
                      .+|||.|+||+|++|++++..|...+.       ....+.-..  .......   ....  ....-.....+...+.+++
T Consensus         3 ~p~KV~IiGA~G~VG~~~a~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~   80 (154)
T d1y7ta1           3 APVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCA--FPLLAGLEATDDPKVAFKD   80 (154)
T ss_dssp             CCEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTT--CTTEEEEEEESCHHHHTTT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhccccccccchhHhHhccccchhhHcCchhhhhccc--cccccccccCCchhhhccc
Confidence            457999999999999999999998642       122222221  1111100   0000  0111123334455678899


Q ss_pred             CcEEEECCCCCCCCCCChhhHHHHHHHhhhhHHHHHHHHHc
Q 018503          117 STAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINE  157 (355)
Q Consensus       117 ~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~  157 (355)
                      +|+||.++|.+..   ...+..+++..|..-.+.+.+.+.+
T Consensus        81 advViitaG~~~~---pg~~r~dl~~~N~~i~~~~~~~i~k  118 (154)
T d1y7ta1          81 ADYALLVGAAPRK---AGMERRDLLQVNGKIFTEQGRALAE  118 (154)
T ss_dssp             CSEEEECCCCCCC---TTCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccEEEeecCcCCC---CCCcHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999997532   3344567888999999999999887

>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Saccharopine reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=98.27  E-value=4.2e-07  Score=70.91  Aligned_cols=75  Identities=17%  Similarity=0.237  Sum_probs=53.5

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcCCCcEEEECCC
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG  125 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~  125 (355)
                      .++|+|+|| |++|+++++.|.+.||+|++++|+.++...+............+..+.......+...|.++.+..
T Consensus         2 ~K~IliiGa-G~~G~~~a~~L~~~g~~V~v~dr~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~i~~~~   76 (182)
T d1e5qa1           2 TKSVLMLGS-GFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGVQHSTPISLDVNDDAALDAEVAKHDLVISLIP   76 (182)
T ss_dssp             CCEEEEECC-STTHHHHHHHHHTTTCEEEEEESCHHHHHHHHTTCTTEEEEECCTTCHHHHHHHHTTSSEEEECSC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECChHHHHHHHhcccccccccccccchhhhHhhhhccceeEeecc
Confidence            379999985 999999999999999999999999998877655422000111122233455666778888887653

>d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]

Probab=98.25  E-value=4.7e-06  Score=64.04  Aligned_cols=103  Identities=13%  Similarity=0.176  Sum_probs=69.0

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhC---C----CeEEEEecCCchhh--cc---CCCCCCccCCC-eeecCCcchhhhcCC
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQAD---N----HQVRVLTRSRSKAE--LI---FPGKKTRFFPG-VMIAEEPQWRDCIQG  116 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~---g----~~V~~~~r~~~~~~--~~---~~~~~~~~~~~-~d~~~~~~~~~~~~~  116 (355)
                      ..||.|+||+|.||++++-.|+..   |    .+++.++.......  ..   .....   ... -...-.....+.+++
T Consensus        24 ~~kV~I~GA~G~Ig~~l~~~La~g~v~g~~~~i~L~L~di~~~~~~l~g~~mdl~d~a---~~~~~~~~~~~~~~~~~~~  100 (175)
T d7mdha1          24 LVNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSL---YPLLREVSIGIDPYEVFED  100 (175)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTT---CTTEEEEEEESCHHHHTTT
T ss_pred             CcEEEEECCCcHHHHHHHHHHHcCcccCCCceEEEEEecCccccchhcchhhhhcccc---cccccCccccccchhhccC
Confidence            348999999999999999999874   2    15555565543221  10   01100   111 122234456678899


Q ss_pred             CcEEEECCCCCCCCCCChhhHHHHHHHhhhhHHHHHHHHHcC
Q 018503          117 STAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINES  158 (355)
Q Consensus       117 ~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~  158 (355)
                      +|+||..+|.+.   .......+.+..|..-.+.+.+++.+.
T Consensus       101 aDvVvi~ag~~r---kpg~tR~Dll~~N~~I~k~~~~~i~~~  139 (175)
T d7mdha1         101 VDWALLIGAKPR---GPGMERAALLDINGQIFADQGKALNAV  139 (175)
T ss_dssp             CSEEEECCCCCC---CTTCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CceEEEeeccCC---CCCCcHHHHHHHHHHHHHHHHHHHHhh
Confidence            999999999752   234445688889999999999999884

>d1mb4a1 c.2.1.3 (A:1-132,A:355-369) Aspartate beta-semialdehyde dehydrogenase {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Vibrio cholerae [TaxId: 666]

Probab=98.16  E-value=1.2e-05  Score=59.50  Aligned_cols=69  Identities=20%  Similarity=0.273  Sum_probs=41.6

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhCC----CeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcCCCcEEEECCC
Q 018503           51 MTVSVTGATGFIGRRLVQRLQADN----HQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG  125 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~g----~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~  125 (355)
                      |||.|+||||++|+.|++.|+++.    .++..++.+..........     ..........+ ...++++|+||.+..
T Consensus         1 mKVaIiGATGyvG~eLi~lLl~~~~~p~~~i~~~ss~~~~gk~~~~~-----~~~~~~~~~~~-~~~~~~~DvvF~alp   73 (147)
T d1mb4a1           1 MRVGLVGWRGMVGSVLMQRMVEERDFDLIEPVFFSTSQIGVPAPNFG-----KDAGMLHDAFD-IESLKQLDAVITCQG   73 (147)
T ss_dssp             CEEEEESCSSHHHHHHHHHHHHTTGGGGSEEEEEESSCCSSBCCCSS-----SCCCBCEETTC-HHHHTTCSEEEECSC
T ss_pred             CEEEEECCccHHHHHHHHHHHhcCCCCceEEEEeccccccccccccC-----Ccceeeecccc-hhhhccccEEEEecC
Confidence            789999999999999999888753    3666555543332221110     00011111111 234578999999974

>d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chlorobium vibrioforme [TaxId: 1098]

Probab=98.12  E-value=7e-06  Score=60.99  Aligned_cols=103  Identities=17%  Similarity=0.163  Sum_probs=69.6

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhCC--CeEEEEecCCchhhccCCC---CCCccCCCeeecCCcchhhhcCCCcEEEECCC
Q 018503           51 MTVSVTGATGFIGRRLVQRLQADN--HQVRVLTRSRSKAELIFPG---KKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG  125 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~---~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~  125 (355)
                      |||.|+|| |.+|++++..|+..+  .++..+++++.........   ..........+...+. .+.++++|+|+.+||
T Consensus         1 mKI~IIGa-G~VG~~la~~l~~~~l~~el~L~Di~~~~~~~~~~d~~~~~~~~~~~~~i~~~~~-~~~~~dadvvvitag   78 (142)
T d1guza1           1 MKITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGSND-YADTANSDIVIITAG   78 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEESC-GGGGTTCSEEEECCS
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCCceEEEeccccccchhhhhhhhcccchhcccceEEecCC-HHHhcCCeEEEEEEe
Confidence            78999996 999999999999987  5999999988654322110   0000011222322222 345789999999999


Q ss_pred             CCCCCCCChhhHHHHHHHhhhhHHHHHHHHHcC
Q 018503          126 TPIGTRWSSEIKKEIKESRIRVTSKVVDLINES  158 (355)
Q Consensus       126 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~  158 (355)
                      .+...   ...-.+....|..-.+.+.+.+.+.
T Consensus        79 ~~~~~---g~~r~~l~~~N~~i~~~i~~~i~~~  108 (142)
T d1guza1          79 LPRKP---GMTREDLLMKNAGIVKEVTDNIMKH  108 (142)
T ss_dssp             CCCCT---TCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cCCCC---CCchHHHHHHHHHHHHHHHHHhhcc
Confidence            75322   2234577889999999999988873

>d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=98.11  E-value=4e-06  Score=64.25  Aligned_cols=65  Identities=25%  Similarity=0.265  Sum_probs=47.2

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcCCCcEEEECC
Q 018503           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLA  124 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a  124 (355)
                      |||.|+| .|.+|+.+++.|.+.||+|++++|+++..........      +|..  ....+.++++|+||-+.
T Consensus         1 MkI~iIG-~G~mG~~lA~~l~~~g~~V~~~d~~~~~~~~a~~~~~------~~~~--~~~~~~~~~~DiIilav   65 (165)
T d2f1ka2           1 MKIGVVG-LGLIGASLAGDLRRRGHYLIGVSRQQSTCEKAVERQL------VDEA--GQDLSLLQTAKIIFLCT   65 (165)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTS------CSEE--ESCGGGGTTCSEEEECS
T ss_pred             CEEEEEe-ecHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHhhc------ccee--eeecccccccccccccC
Confidence            7899998 6999999999999999999999999766544332211      1111  11124568899999764

>d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Clostridium thermocellum [TaxId: 1515]

Probab=98.08  E-value=9.3e-06  Score=60.14  Aligned_cols=100  Identities=17%  Similarity=0.228  Sum_probs=64.7

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhCCC--eEEEEecCCchhhc----cCCCCCCccCCCeeecCCcchhhhcCCCcEEEECC
Q 018503           51 MTVSVTGATGFIGRRLVQRLQADNH--QVRVLTRSRSKAEL----IFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLA  124 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~----~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a  124 (355)
                      +||.|+|+ |.+|+.++-.|+.++.  ++..++++.+....    +.....  ......+..  .-.+.++++|+|+.+|
T Consensus         2 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~g~a~Dl~~~~~--~~~~~~~~~--~~~~~~~~adivvita   76 (142)
T d1y6ja1           2 SKVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLP--FMGQMSLYA--GDYSDVKDCDVIVVTA   76 (142)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCC--CTTCEEEC----CGGGGTTCSEEEECC
T ss_pred             CeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeccCCccceeeeeeccCcc--cCCCeeEee--CcHHHhCCCceEEEec
Confidence            58999996 9999999999999874  89999988765321    111110  011222222  2234578999999999


Q ss_pred             CCCCCCCCChhhHHHHHHHhhhhHHHHHHHHHcC
Q 018503          125 GTPIGTRWSSEIKKEIKESRIRVTSKVVDLINES  158 (355)
Q Consensus       125 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~  158 (355)
                      |...   .......+.+..|..-.+.+++.+.++
T Consensus        77 g~~~---~~~~~r~~l~~~N~~i~~~i~~~i~~~  107 (142)
T d1y6ja1          77 GANR---KPGETRLDLAKKNVMIAKEVTQNIMKY  107 (142)
T ss_dssp             CC---------CHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cccc---CcCcchhHHhhHHHHHHHHHHHHhhcc
Confidence            8642   223445678889999999999998883

>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Ketopantoate reductase PanE
species: Escherichia coli [TaxId: 562]

Probab=98.04  E-value=1.3e-05  Score=61.31  Aligned_cols=72  Identities=15%  Similarity=0.074  Sum_probs=48.4

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcCCCcEEEECCC
Q 018503           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG  125 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~  125 (355)
                      |||+|+|+ |.+|+.++..|.+.||+|+.++|+.............  .......-.....+...++|+||.+.-
T Consensus         1 MkI~IiGa-G~iG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~D~iii~vk   72 (167)
T d1ks9a2           1 MKITVLGC-GALGQLWLTALCKQGHEVQGWLRVPQPYCSVNLVETD--GSIFNESLTANDPDFLATSDLLLVTLK   72 (167)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCSEEEEEEECTT--SCEEEEEEEESCHHHHHTCSEEEECSC
T ss_pred             CEEEEECc-CHHHHHHHHHHHHCCCceEEEEcCHHHhhhhccccCC--ccccccccccchhhhhcccceEEEeec
Confidence            79999996 9999999999999999999999988765433221100  111111111122344567999998864

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=98.04  E-value=1.7e-06  Score=68.57  Aligned_cols=40  Identities=38%  Similarity=0.514  Sum_probs=36.4

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhcc
Q 018503           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELI   90 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~   90 (355)
                      |||.|+||+|.+|++|++.|++.||+|++.+|++++...+
T Consensus         1 Mki~vigGaG~iG~alA~~la~~G~~V~l~~R~~e~~~~l   40 (212)
T d1jaya_           1 MRVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAK   40 (212)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHH
T ss_pred             CEEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHH
Confidence            7899999999999999999999999999999998765544

>d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Toxoplasma gondii [TaxId: 5811]

Probab=98.02  E-value=1.1e-05  Score=60.77  Aligned_cols=118  Identities=13%  Similarity=0.116  Sum_probs=73.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCC-eEEEEecCCchhhccCCCCCC--c-cCCCeeecCCcchhhhcCCCcEEEECC
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRSKAELIFPGKKT--R-FFPGVMIAEEPQWRDCIQGSTAVVNLA  124 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~--~-~~~~~d~~~~~~~~~~~~~~d~vi~~a  124 (355)
                      +++||.|+|+ |.+|+.++..|...+. ++..++.+++...........  . ......+......++.++++|+|+.++
T Consensus         6 k~~KI~IIGa-G~VG~~lA~~l~~~~~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~~~~~~~~~~adiVvita   84 (154)
T d1pzga1           6 RRKKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRAEYSYEAALTGADCVIVTA   84 (154)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEEECSHHHHHTTCSEEEECC
T ss_pred             CCCcEEEECC-CHHHHHHHHHHHhCCCceEEEEEeccccchhHHHHHhhhccccCCeeEEeccCchhhhhcCCCeEEEec
Confidence            4579999996 9999999988888774 899898877653322110000  0 001112222344567788999999999


Q ss_pred             CCCCCCC-CC-hhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEe
Q 018503          125 GTPIGTR-WS-SEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVS  169 (355)
Q Consensus       125 ~~~~~~~-~~-~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~S  169 (355)
                      +.+.... +. ...-.+.+..|....+.+++.+.+  .+.+-++.+-
T Consensus        85 g~~~~~g~~~~~~tR~~l~~~n~~iv~~i~~~i~~--~~p~aiviiv  129 (154)
T d1pzga1          85 GLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKK--YCPKTFIIVV  129 (154)
T ss_dssp             SCSSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHH--HCTTCEEEEC
T ss_pred             ccccCCCCCCcccchhhhhhhhHHHHHHHHHHHHh--cCCCcEEEEe
Confidence            8753211 10 112346677899999999998888  3444444443

>d5mdha1 c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=98.00  E-value=1.3e-05  Score=60.42  Aligned_cols=106  Identities=11%  Similarity=0.112  Sum_probs=65.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCC-------CeEEEEecCCchhh--ccCCCCCCccCCC-eeecCCcchhhhcCCCc
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADN-------HQVRVLTRSRSKAE--LIFPGKKTRFFPG-VMIAEEPQWRDCIQGST  118 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g-------~~V~~~~r~~~~~~--~~~~~~~~~~~~~-~d~~~~~~~~~~~~~~d  118 (355)
                      .+|||.|+||+|.+|++++-.|+..+       .+++.++.+.....  .+........... ..+.-.+...+.++++|
T Consensus         2 ~p~KV~IiGA~G~VG~~la~~l~~~~~~~~~~~~~L~l~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d   81 (154)
T d5mdha1           2 EPIRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPLLKDVIATDKEEIAFKDLD   81 (154)
T ss_dssp             CCEEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCTTEEEEEEESCHHHHTTTCS
T ss_pred             CceEEEEECCCCHHHHHHHHHHHHHHhcCCCCccEEEEecCccchhhhhhhhhhhcccccccccccccCcccccccCCce
Confidence            35799999999999999999998653       14555554433221  1100000000111 12222334557788999


Q ss_pred             EEEECCCCCCCCCCChhhHHHHHHHhhhhHHHHHHHHHc
Q 018503          119 AVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINE  157 (355)
Q Consensus       119 ~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~  157 (355)
                      +||.++|.+...   .....+.+..|..-.+.+.+.+.+
T Consensus        82 vVVitag~~~~~---g~sr~dll~~N~~i~k~~~~~i~k  117 (154)
T d5mdha1          82 VAILVGSMPRRD---GMERKDLLKANVKIFKCQGAALDK  117 (154)
T ss_dssp             EEEECCSCCCCT---TCCTTTTHHHHHHHHHHHHHHHHH
T ss_pred             EEEEecccCCCC---CCchhHHHHHhHHHHHHHHHHHHh
Confidence            999999975332   222235678899999999988866

>d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=98.00  E-value=1.6e-05  Score=58.87  Aligned_cols=111  Identities=14%  Similarity=0.148  Sum_probs=72.0

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhCC--CeEEEEecCCchhhccCCCCCC--c-cCCCeeecCCcchhhhcCCCcEEEECCC
Q 018503           51 MTVSVTGATGFIGRRLVQRLQADN--HQVRVLTRSRSKAELIFPGKKT--R-FFPGVMIAEEPQWRDCIQGSTAVVNLAG  125 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~--~-~~~~~d~~~~~~~~~~~~~~d~vi~~a~  125 (355)
                      |||.|+|+ |.+|.+++-.|..+|  .++..++++++...........  . ......+....+. +.++++|+||..||
T Consensus         1 MKI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~alDl~~~~~~~~~~~~i~~~~d~-~~~~~adiVvitag   78 (142)
T d1ojua1           1 MKLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGADY-SLLKGSEIIVVTAG   78 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEESCG-GGGTTCSEEEECCC
T ss_pred             CEEEEECc-CHHHHHHHHHHHhcCcCceEEEEecccchhhHHHHHHhhhccccCCCCccccCCCH-HHhccccEEEEecc
Confidence            79999995 999999999999877  4899999887653211000000  0 0011122222233 46789999999999


Q ss_pred             CCCCCCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEE
Q 018503          126 TPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLV  168 (355)
Q Consensus       126 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~  168 (355)
                      .+...   .....+....|..-.+.+.+.+.+.  +...++.+
T Consensus        79 ~~~~~---g~~r~~l~~~n~~i~~~i~~~i~~~--~p~aiviv  116 (142)
T d1ojua1          79 LARKP---GMTRLDLAHKNAGIIKDIAKKIVEN--APESKILV  116 (142)
T ss_dssp             CCCCS---SCCHHHHHHHHHHHHHHHHHHHHTT--STTCEEEE
T ss_pred             ccCCC---CCchHHHHHHhhHHHHHHHHHHHhh--CCCcEEEE
Confidence            75332   2334577788999999999999883  33444444

>d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=97.99  E-value=6.8e-06  Score=60.81  Aligned_cols=110  Identities=19%  Similarity=0.258  Sum_probs=70.6

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhCC--CeEEEEecCCchhhccCCCCC--CccCCCeeecCCcchhhhcCCCcEEEECCCC
Q 018503           51 MTVSVTGATGFIGRRLVQRLQADN--HQVRVLTRSRSKAELIFPGKK--TRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT  126 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~--~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~  126 (355)
                      |||.|+|+ |.+|++++..|+.++  .++..++++++..........  ........+.. +.. +.++++|+||.+||.
T Consensus         1 mKI~IIGa-G~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~~~Dl~~~~~~~~~~~~~~-~~~-~~~~~adivvitag~   77 (140)
T d1a5za1           1 MKIGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYA-GDY-ADLKGSDVVIVAAGV   77 (140)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEE-CCG-GGGTTCSEEEECCCC
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEecccccccchhccccccccccccccccC-CcH-HHhcCCCEEEEeccc
Confidence            79999996 999999999888876  589999988655432110000  00011112221 222 457899999999997


Q ss_pred             CCCCCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEE
Q 018503          127 PIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLV  168 (355)
Q Consensus       127 ~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~  168 (355)
                      +...   .....+.+..|..-.+.+.+.+.+.  +.+.++.+
T Consensus        78 ~~~~---g~~r~dl~~~N~~I~~~i~~~i~~~--~p~aiviv  114 (140)
T d1a5za1          78 PQKP---GETRLQLLGRNARVMKEIARNVSKY--APDSIVIV  114 (140)
T ss_dssp             CCCS---SCCHHHHHHHHHHHHHHHHHHHHHH--CTTCEEEE
T ss_pred             ccCC---CcchhhhhccccchHHHHHHHHHhc--CCCcEEEE
Confidence            5332   2234567788999999999998883  33344444

>d2hjsa1 c.2.1.3 (A:3-129,A:320-336) Usg-1 protein homolog PA3116 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Usg-1 protein homolog PA3116
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=97.98  E-value=7.6e-06  Score=60.84  Aligned_cols=69  Identities=20%  Similarity=0.244  Sum_probs=43.8

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCC---CeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcCCCcEEEECCC
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADN---HQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG  125 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g---~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~  125 (355)
                      +|+|.|.||||++|+.+++.|.+++   .++..+..+.+..+.....     .....+.+.+  ...+.++|++|.+++
T Consensus         2 ~mnVaIvGATGyvG~eli~lL~~~~hP~~~l~~~~s~~~~Gk~i~~~-----~~~~~~~~~~--~~~~~~~d~vf~a~p   73 (144)
T d2hjsa1           2 PLNVAVVGATGSVGEALVGLLDERDFPLHRLHLLASAESAGQRMGFA-----ESSLRVGDVD--SFDFSSVGLAFFAAA   73 (144)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECTTTTTCEEEET-----TEEEECEEGG--GCCGGGCSEEEECSC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhcCCCceEEEEEeecccCCcceeec-----cccchhccch--hhhhccceEEEecCC
Confidence            4899999999999999999997655   3777766555443332211     1111111211  223457899998875

>d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=97.95  E-value=3.6e-05  Score=57.37  Aligned_cols=102  Identities=25%  Similarity=0.232  Sum_probs=66.9

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCC--eEEEEecCCchhhcc----CCCCCCccCCCeeecCCcchhhhcCCCcEEEEC
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNH--QVRVLTRSRSKAELI----FPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNL  123 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~----~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~  123 (355)
                      ..||.|+|+ |++|++++..|+.+|.  ++..+++.++.....    ...... ......+... . .+.++++|+||.+
T Consensus         6 ~~KI~IiGa-G~vG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~-~~~~~~~~~~-d-~~~l~daDvvvit   81 (148)
T d1ldna1           6 GARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVF-APKPVDIWHG-D-YDDCRDADLVVIC   81 (148)
T ss_dssp             SCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTS-SSSCCEEEEC-C-GGGTTTCSEEEEC
T ss_pred             CCeEEEECc-CHHHHHHHHHHHhcCCCceEEEEeeccccccchhccHhhCccc-cCCCeEEEEC-C-HHHhccceeEEEe
Confidence            468999996 9999999999999874  899999877653211    000000 0111222221 2 2557899999999


Q ss_pred             CCCCCCCCCChhhHHHHHHHhhhhHHHHHHHHHcC
Q 018503          124 AGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINES  158 (355)
Q Consensus       124 a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~  158 (355)
                      +|.+..   ......+.+..|..-.+.+.+.+.++
T Consensus        82 ag~~~~---~~~~R~dl~~~N~~i~~~i~~~i~~~  113 (148)
T d1ldna1          82 AGANQK---PGETRLDLVDKNIAIFRSIVESVMAS  113 (148)
T ss_dssp             CSCCCC---TTTCSGGGHHHHHHHHHHHHHHHHHH
T ss_pred             cccccc---cCcchhHHHHHHHHHHHHHHHHHHhh
Confidence            997532   22223466678888889999888773

>d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]

Probab=97.94  E-value=2.4e-05  Score=57.86  Aligned_cols=100  Identities=17%  Similarity=0.259  Sum_probs=69.2

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhCCC--eEEEEecCCchhhcc----CCCCCCccCCCeeecCCcchhhhcCCCcEEEECC
Q 018503           51 MTVSVTGATGFIGRRLVQRLQADNH--QVRVLTRSRSKAELI----FPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLA  124 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~----~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a  124 (355)
                      .||.|+|+ |.+|++++-.|..+|.  ++..+++++...+..    .....  ......+...+++ +.++++|+||.+|
T Consensus         2 ~Ki~IIGa-G~VG~~~a~~l~~~~l~~ElvL~D~~~~~~~g~a~Dl~~a~~--~~~~~~i~~~~~~-~~~~daDvVVita   77 (143)
T d1llda1           2 TKLAVIGA-GAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSS--FYPTVSIDGSDDP-EICRDADMVVITA   77 (143)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGG--GSTTCEEEEESCG-GGGTTCSEEEECC
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccccchhHHHHHHhccc--cCCCceeecCCCH-HHhhCCcEEEEec
Confidence            48999996 9999999999999874  899999887553311    11000  0111233333344 3578899999999


Q ss_pred             CCCCCCCCChhhHHHHHHHhhhhHHHHHHHHHc
Q 018503          125 GTPIGTRWSSEIKKEIKESRIRVTSKVVDLINE  157 (355)
Q Consensus       125 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~  157 (355)
                      |.+..   ......+.+..|..-.+.+...+.+
T Consensus        78 G~~~~---~g~~R~dl~~~N~~i~~~i~~~i~~  107 (143)
T d1llda1          78 GPRQK---PGQSRLELVGATVNILKAIMPNLVK  107 (143)
T ss_dssp             CCCCC---TTCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccccC---CCCchhhhhhhhHHHHHHHHHHHHh
Confidence            97532   2333457888999999999998888

>d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Haloarcula marismortui [TaxId: 2238]

Probab=97.93  E-value=2e-05  Score=58.16  Aligned_cols=100  Identities=17%  Similarity=0.237  Sum_probs=66.5

Q ss_pred             EEEEEcCCchHHHHHHHHHHhCCC--eEEEEecCCch--hh----ccCCCCCCccCCCeeecCCcchhhhcCCCcEEEEC
Q 018503           52 TVSVTGATGFIGRRLVQRLQADNH--QVRVLTRSRSK--AE----LIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNL  123 (355)
Q Consensus        52 ~IlVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~--~~----~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~  123 (355)
                      ||.|+||+|.+|++++-.|..++.  ++..++.....  ..    .+.....  ......+.. .+. +.++++|+|+.+
T Consensus         2 KV~IiGaaG~VG~~~A~~l~~~~l~~el~L~Di~~~~~~~~g~a~Dl~~~~~--~~~~~~i~~-~~~-~~~~~aDiVvit   77 (142)
T d1o6za1           2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIA--YDSNTRVRQ-GGY-EDTAGSDVVVIT   77 (142)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHT--TTCCCEEEE-CCG-GGGTTCSEEEEC
T ss_pred             eEEEECCCCcHHHHHHHHHHhCCCCCEEEEEecCCcccccceeecchhhccc--ccCCceEee-CCH-HHhhhcCEEEEe
Confidence            799999999999999999999874  78888864322  11    1110000  011112221 122 345799999999


Q ss_pred             CCCCCCCCCChhhHHHHHHHhhhhHHHHHHHHHcC
Q 018503          124 AGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINES  158 (355)
Q Consensus       124 a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~  158 (355)
                      ||.+..   ...+-.+.+..|..-.+.+.+.+.+.
T Consensus        78 aG~~~~---~g~~R~dl~~~N~~I~~~i~~~i~~~  109 (142)
T d1o6za1          78 AGIPRQ---PGQTRIDLAGDNAPIMEDIQSSLDEH  109 (142)
T ss_dssp             CCCCCC---TTCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             cccccc---cCCchhhHHHHHHHHHHHHHHHHHhc
Confidence            997532   23345688899999999999999984

>d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: GDP-mannose 6-dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=97.88  E-value=3e-05  Score=61.23  Aligned_cols=76  Identities=28%  Similarity=0.417  Sum_probs=53.0

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCC-----------eeecCCcchhhhcCCCcE
Q 018503           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPG-----------VMIAEEPQWRDCIQGSTA  119 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~-----------~d~~~~~~~~~~~~~~d~  119 (355)
                      |||.|+| .|++|..++..|++.||+|++++.+.+....+...........           ..+.-..++.++++++|+
T Consensus         1 MkI~ViG-lG~vGl~~a~~la~~g~~V~g~D~n~~~i~~ln~g~~p~~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~d~   79 (202)
T d1mv8a2           1 MRISIFG-LGYVGAVCAGCLSARGHEVIGVDVSSTKIDLINQGKSPIVEPGLEALLQQGRQTGRLSGTTDFKKAVLDSDV   79 (202)
T ss_dssp             CEEEEEC-CSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEESCHHHHHHTCSE
T ss_pred             CEEEEEC-CCHhHHHHHHHHHhCCCcEEEEeCCHHHHHHhcccCCcccchhhhhhhhhhhcccccccCCCHHHHHhhCCE
Confidence            7899998 8999999999999999999999998776554433211000000           011123455666778999


Q ss_pred             EEECCCCC
Q 018503          120 VVNLAGTP  127 (355)
Q Consensus       120 vi~~a~~~  127 (355)
                      ++.|.+-+
T Consensus        80 i~i~VpTP   87 (202)
T d1mv8a2          80 SFICVGTP   87 (202)
T ss_dssp             EEECCCCC
T ss_pred             EEEecCcc
Confidence            99998754

>d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]

Probab=97.88  E-value=4.7e-05  Score=57.23  Aligned_cols=102  Identities=16%  Similarity=0.224  Sum_probs=68.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCC--eEEEEecCCchhhccC----CCCCCccCCCeeecCCcchhhhcCCCcEEEE
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNH--QVRVLTRSRSKAELIF----PGKKTRFFPGVMIAEEPQWRDCIQGSTAVVN  122 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~----~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~  122 (355)
                      +..||.|+|+ |.+|+.++-.|..+|.  ++..++++++......    ....  ...........+. +.++++|+||.
T Consensus        19 ~~~KV~IIGa-G~VG~~~A~~l~~~~l~~ElvLiD~~~~~a~g~alDl~h~~~--~~~~~~~~~~~d~-~~~~~adiVVi   94 (160)
T d1i0za1          19 PNNKITVVGV-GQVGMACAISILGKSLADELALVDVLEDKLKGEMMDLQHGSL--FLQTPKIVADKDY-SVTANSKIVVV   94 (160)
T ss_dssp             CSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGG--GCCCSEEEECSSG-GGGTTCSEEEE
T ss_pred             CCCeEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccchhHHHHHHHhcccc--ccCCCeEEeccch-hhcccccEEEE
Confidence            3469999995 9999999999999985  8999998765542111    1000  0001111122233 45789999999


Q ss_pred             CCCCCCCCCCChhhHHHHHHHhhhhHHHHHHHHHc
Q 018503          123 LAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINE  157 (355)
Q Consensus       123 ~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~  157 (355)
                      .||.+...   ..+..+.+..|....+.+...+.+
T Consensus        95 tAg~~~~~---g~tR~~l~~~N~~i~~~i~~~i~~  126 (160)
T d1i0za1          95 TAGVRQQE---GESRLNLVQRNVNVFKFIIPQIVK  126 (160)
T ss_dssp             CCSCCCCT---TCCGGGGHHHHHHHHHHHHHHHHH
T ss_pred             ecCCcccc---CcchHHHHHHHHHHHHHHHHHHHh
Confidence            99975332   222346677899999999998888

>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamyl tRNA-reductase middle domain
species: Archaeon Methanopyrus kandleri [TaxId: 2320]

Probab=97.87  E-value=6.4e-06  Score=62.39  Aligned_cols=72  Identities=25%  Similarity=0.290  Sum_probs=57.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCC-eEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcCCCcEEEECCCCC
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTP  127 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~~  127 (355)
                      ..++|||+|+ |-+|+.+++.|...|. +|+++.|+.++...+...     + +....+.+++.+.+.++|+||.+.+.+
T Consensus        23 ~~~~ilviGa-G~~g~~v~~~L~~~g~~~i~v~nRt~~ka~~l~~~-----~-~~~~~~~~~~~~~l~~~Divi~atss~   95 (159)
T d1gpja2          23 HDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARD-----L-GGEAVRFDELVDHLARSDVVVSATAAP   95 (159)
T ss_dssp             TTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHH-----H-TCEECCGGGHHHHHHTCSEEEECCSSS
T ss_pred             ccCeEEEECC-CHHHHHHHHHHHhcCCcEEEEEcCcHHHHHHHHHh-----h-hcccccchhHHHHhccCCEEEEecCCC
Confidence            3479999996 9999999999999997 699999988776655432     1 245566778888889999999998753

>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn bsu222
species: Bacillus subtilis [TaxId: 1423]

Probab=97.85  E-value=2.5e-05  Score=57.34  Aligned_cols=72  Identities=19%  Similarity=0.170  Sum_probs=55.8

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhh-cCCCcEEEECCC
Q 018503           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDC-IQGSTAVVNLAG  125 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~-~~~~d~vi~~a~  125 (355)
                      |+++|+| .|.+|+++++.|.+.|++|++++.+++...........  ....|..+++.+.++ +.++|.||-+.+
T Consensus         1 k~~iIiG-~G~~G~~la~~L~~~g~~vvvid~d~~~~~~~~~~~~~--~~~gd~~~~~~l~~a~i~~a~~vi~~~~   73 (134)
T d2hmva1           1 KQFAVIG-LGRFGGSIVKELHRMGHEVLAVDINEEKVNAYASYATH--AVIANATEENELLSLGIRNFEYVIVAIG   73 (134)
T ss_dssp             CCEEEEC-CSHHHHHHHHHHHHTTCCCEEEESCHHHHHHTTTTCSE--EEECCTTCTTHHHHHTGGGCSEEEECCC
T ss_pred             CEEEEEC-CCHHHHHHHHHHHHCCCeEEEecCcHHHHHHHHHhCCc--ceeeecccchhhhccCCccccEEEEEcC
Confidence            4688998 59999999999999999999999999887766544321  122467788888776 578999887764

>d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chloroflexus aurantiacus [TaxId: 1108]

Probab=97.83  E-value=3.8e-05  Score=56.77  Aligned_cols=111  Identities=14%  Similarity=0.161  Sum_probs=66.8

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhCC-CeEEEEecCCchhhccCCCCCC---ccCCCeeecCCcchhhhcCCCcEEEECCCC
Q 018503           51 MTVSVTGATGFIGRRLVQRLQADN-HQVRVLTRSRSKAELIFPGKKT---RFFPGVMIAEEPQWRDCIQGSTAVVNLAGT  126 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~---~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~  126 (355)
                      +||.|+|+ |.+|.+++-.|..++ .++..++..++...........   .......+....+. +.+++.|+||-+||.
T Consensus         2 ~KI~IIGa-G~VG~~~A~~l~~~~l~dl~l~D~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~d~-~~~~~advvvitag~   79 (142)
T d1uxja1           2 KKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGTNNY-ADTANSDVIVVTSGA   79 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESCG-GGGTTCSEEEECCSC
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCcceEEEEeeccccchhHHHHhhccccccCCCCEEEecCcH-HHhcCCCEEEEeeec
Confidence            68999995 999999999998877 4899999877653321110000   00001122222233 346789999999997


Q ss_pred             CCCCCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEE
Q 018503          127 PIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLV  168 (355)
Q Consensus       127 ~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~  168 (355)
                      +..   ......+.+..|..-.+.+++.+.+.  +.+-++.+
T Consensus        80 ~~~---~~~~r~dl~~~N~~i~~~i~~~i~k~--~p~aiviv  116 (142)
T d1uxja1          80 PRK---PGMSREDLIKVNADITRACISQAAPL--SPNAVIIM  116 (142)
T ss_dssp             C------------CHHHHHHHHHHHHHHHGGG--CTTCEEEE
T ss_pred             cCC---cCcchhHHHhHHHHHHHHHHHHHhcc--CCCceEEE
Confidence            522   22333466788999999999999883  33444444

>d1diha1 c.2.1.3 (A:2-130,A:241-273) Dihydrodipicolinate reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Escherichia coli [TaxId: 562]

Probab=97.81  E-value=2.3e-05  Score=59.22  Aligned_cols=75  Identities=15%  Similarity=0.133  Sum_probs=44.8

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhC-CCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcCCCcEEEECC
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQAD-NHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLA  124 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a  124 (355)
                      .+||+|.|++|.+|+.|++.+.+. +.++.+....+..................++.-.+++...++.+|+||...
T Consensus         4 ~ikI~i~Ga~GrMG~~i~~~i~~~~~~~lv~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~DViIDFs   79 (162)
T d1diha1           4 NIRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGSDAGELAGAGKTGVTVQSSLDAVKDDFDVFIDFT   79 (162)
T ss_dssp             BEEEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTTCSCCTTCSSSSSCCSCCEESCSTTTTTSCSEEEECS
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecccchhccchhhhhhccccCCceeeccHHHHhcccceEEEec
Confidence            479999999999999999999886 677766543322211111000000011112222334556677899999885

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=97.77  E-value=1.5e-05  Score=61.27  Aligned_cols=74  Identities=23%  Similarity=0.192  Sum_probs=51.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcCCCcEEEECCC
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG  125 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~  125 (355)
                      ...+|||+||+|-+|...++.+...|.+|+++++++++.......+.   ...+|..+.........++|+||.+.|
T Consensus        27 ~g~~VlI~ga~G~vG~~aiqlak~~G~~vi~~~~~~~~~~~~~~lGa---~~~i~~~~~~~~~~~~~g~D~v~d~~G  100 (171)
T d1iz0a2          27 PGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPLALGA---EEAATYAEVPERAKAWGGLDLVLEVRG  100 (171)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHHHTTC---SEEEEGGGHHHHHHHTTSEEEEEECSC
T ss_pred             CCCEEEEEeccccchhhhhhhhccccccccccccccccccccccccc---ceeeehhhhhhhhhccccccccccccc
Confidence            34689999999999999999999999999999998876555443321   111233222222223358999999876

>d2g17a1 c.2.1.3 (A:1-153,A:309-334) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC
species: Salmonella typhimurium [TaxId: 90371]

Probab=97.73  E-value=2.4e-05  Score=60.55  Aligned_cols=74  Identities=22%  Similarity=0.302  Sum_probs=44.2

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhC-CCeEEEEec-CCc--hhhcc---CCCCCCccCCCeeecCCcchhhhcCCCcEEEE
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQAD-NHQVRVLTR-SRS--KAELI---FPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVN  122 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~-g~~V~~~~r-~~~--~~~~~---~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~  122 (355)
                      ||||.|+|||||+|+.|++.|.++ ..+|..+.. +..  ..+..   .....  ......+...+.......++|++|.
T Consensus         1 MikVaIiGATGyvG~eLlrlL~~HP~~ei~~l~~~s~~~~aGk~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~dvvf~   78 (179)
T d2g17a1           1 MLNTLIVGASGYAGAELVSYVNRHPHMTITALTVSAQSNDAGKLISDLHPQLK--GIVDLPLQPMSDVRDFSADVDVVFL   78 (179)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHCTTEEEEEEEEETTCTTTTCBHHHHCGGGT--TTCCCBEEEESCGGGTCTTCCEEEE
T ss_pred             CcEEEEECcccHHHHHHHHHHHhCCCCceEeeEeecccccccccccccccccc--cccccccccchhhhhhhcccceeec
Confidence            479999999999999999999998 567766543 221  11111   00000  0111122233344445678999999


Q ss_pred             CCC
Q 018503          123 LAG  125 (355)
Q Consensus       123 ~a~  125 (355)
                      +..
T Consensus        79 alp   81 (179)
T d2g17a1          79 ATA   81 (179)
T ss_dssp             CSC
T ss_pred             ccc
Confidence            864

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=97.73  E-value=1.4e-05  Score=62.17  Aligned_cols=74  Identities=16%  Similarity=0.087  Sum_probs=54.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhc-----CCCcEEEEC
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCI-----QGSTAVVNL  123 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~-----~~~d~vi~~  123 (355)
                      ...+|||+||+|.+|...++.....|.+|+++++++++.........   ...++..+.+..+...     .++|+||++
T Consensus        29 ~G~~VlV~ga~ggvG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~Ga---~~vi~~~~~~~~~~~~~~~~~~Gvd~v~D~  105 (182)
T d1v3va2          29 GGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLKQIGF---DAAFNYKTVNSLEEALKKASPDGYDCYFDN  105 (182)
T ss_dssp             SSCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTC---SEEEETTSCSCHHHHHHHHCTTCEEEEEES
T ss_pred             CCCEEEEEeCCCchhHHHHHHHHccCCEEEEeCCCHHHHHHHHhhhh---hhhcccccccHHHHHHHHhhcCCCceeEEe
Confidence            34689999999999999999999999999999998877655444332   2224444554444333     379999999


Q ss_pred             CC
Q 018503          124 AG  125 (355)
Q Consensus       124 a~  125 (355)
                      .|
T Consensus       106 vG  107 (182)
T d1v3va2         106 VG  107 (182)
T ss_dssp             SC
T ss_pred             cC
Confidence            86

>d1vkna1 c.2.1.3 (A:1-144,A:308-339) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC
species: Thermotoga maritima [TaxId: 2336]

Probab=97.72  E-value=1.6e-05  Score=60.98  Aligned_cols=74  Identities=14%  Similarity=0.151  Sum_probs=44.7

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCC-CeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcCCCcEEEECCC
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADN-HQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG  125 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~  125 (355)
                      ||||.|+||||++|+.|++.|.++. .+|..+..+......+..... ......+ ....+.+.+.+++|+|+.+..
T Consensus         1 MikVaIvGATGyvG~eLirlL~~HP~~ei~~l~s~~~aG~~i~~~~p-~~~~~~~-~~~~~~~~~~~~~dvvf~a~p   75 (176)
T d1vkna1           1 MIRAGIIGATGYTGLELVRLLKNHPEAKITYLSSRTYAGKKLEEIFP-STLENSI-LSEFDPEKVSKNCDVLFTALP   75 (176)
T ss_dssp             CEEEEEESTTSHHHHHHHHHHHHCTTEEEEEEECSTTTTSBHHHHCG-GGCCCCB-CBCCCHHHHHHHCSEEEECCS
T ss_pred             CeEEEEECCCcHHHHHHHHHHHhCCCceEEEeeccccCCCcccccCc-hhhcccc-ccccCHhHhccccceEEEccc
Confidence            4699999999999999999999864 577777654443332211000 0011111 122233344457999998875

>d2cvoa1 c.2.1.3 (A:68-218,A:384-415) Putative semialdehyde dehydrogenase {Rice (Oryza sativa) [TaxId: 4530]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Putative semialdehyde dehydrogenase
species: Rice (Oryza sativa) [TaxId: 4530]

Probab=97.72  E-value=1.8e-05  Score=61.46  Aligned_cols=76  Identities=17%  Similarity=0.187  Sum_probs=45.0

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHhCC-CeEEEEecCCchhhccCCCCCCccCCCeeec-CCcchhhhcCCCcEEEECCC
Q 018503           48 ASQMTVSVTGATGFIGRRLVQRLQADN-HQVRVLTRSRSKAELIFPGKKTRFFPGVMIA-EEPQWRDCIQGSTAVVNLAG  125 (355)
Q Consensus        48 ~~~~~IlVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~-~~~~~~~~~~~~d~vi~~a~  125 (355)
                      ++++||.|+||||++|+.|++.|.++. .++..+..+............  .....+.. ........+.++|+|+.+..
T Consensus         3 ~~kikVaIlGATGyvG~elirLL~~HP~~ei~~l~S~~~aG~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~Dvvf~alp   80 (183)
T d2cvoa1           3 GEEVRIAVLGASGYTGAEIVRLLANHPQFRIKVMTADRKAGEQFGSVFP--HLITQDLPNLVAVKDADFSNVDAVFCCLP   80 (183)
T ss_dssp             SSCEEEEEESCSSHHHHHHHHHHTTCSSEEEEEEECSTTTTSCHHHHCG--GGTTSCCCCCBCGGGCCGGGCSEEEECCS
T ss_pred             CCccEEEEECcccHHHHHHHHHHHhCCCceEEEEeccccCCCccccccc--cccccccccchhhhhhhhcccceeeeccc
Confidence            345799999999999999999999974 577766544333222110000  00001111 12222334567999998875

>d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Aquifex aeolicus [TaxId: 63363]

Probab=97.71  E-value=6.9e-05  Score=57.33  Aligned_cols=68  Identities=10%  Similarity=0.055  Sum_probs=46.3

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhCCC--eEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcCCCcEEEECCC
Q 018503           51 MTVSVTGATGFIGRRLVQRLQADNH--QVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG  125 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~  125 (355)
                      ++|+|+| .|.+|..+++.|.+.|+  +|++++++.+.........    .  .|....+.-.....++|.||.+..
T Consensus         2 k~I~IIG-~G~mG~sla~~L~~~g~~~~I~~~D~~~~~~~~a~~~~----~--~~~~~~~~~~~~~~~~dlIila~p   71 (171)
T d2g5ca2           2 QNVLIVG-VGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLG----I--IDEGTTSIAKVEDFSPDFVMLSSP   71 (171)
T ss_dssp             CEEEEES-CSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTT----S--CSEEESCGGGGGGTCCSEEEECSC
T ss_pred             CEEEEEc-cCHHHHHHHHHHHhcCCCeEEEEEECChHHHHHHHHhh----c--chhhhhhhhhhhccccccccccCC
Confidence            5799998 79999999999999985  8999999887655433321    1  222212222223347899998863

>d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Glycinamide ribonucleotide transformylase PurT, N-domain
species: Escherichia coli [TaxId: 562]

Probab=97.70  E-value=4.8e-05  Score=53.42  Aligned_cols=70  Identities=13%  Similarity=0.168  Sum_probs=53.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcC--CCcEEEEC
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ--GSTAVVNL  123 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--~~d~vi~~  123 (355)
                      ...||.|+| +|++|+-++....+.|+++++++.+++.........    +...++.|.+.+.++..  ++|+|-.=
T Consensus        10 ~~~kigIlG-gGQL~rMla~aA~~lG~~v~v~d~~~~~PA~~va~~----~i~~~~~d~~~l~~~~~~~~~DviT~E   81 (111)
T d1kjqa2          10 AATRVMLLG-SGELGKEVAIECQRLGVEVIAVDRYADAPAMHVAHR----SHVINMLDGDALRRVVELEKPHYIVPE   81 (111)
T ss_dssp             TCCEEEEES-CSHHHHHHHHHHHTTTCEEEEEESSTTCGGGGGSSE----EEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred             CCCEEEEEe-CCHHHHHHHHHHHHCCCEEEEEcCCCCCchhhcCCe----EEECCCCCHHHHHHHHHhhCCceEEEE
Confidence            346899999 799999999999999999999999876544433221    33457778888877663  68998643

>d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Streptococcus pyogenes [TaxId: 1314]

Probab=97.69  E-value=1.1e-05  Score=60.75  Aligned_cols=65  Identities=15%  Similarity=0.215  Sum_probs=49.7

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcCCCcEEEECC
Q 018503           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLA  124 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a  124 (355)
                      |||.++| +|.+|+++++.|++.|++|++.+|+.++...+....      ++..  ..+..++++++|+||-+.
T Consensus         1 MkIg~IG-~G~mG~al~~~l~~~~~~i~v~~r~~~~~~~l~~~~------g~~~--~~~~~~~~~~~dvIilav   65 (152)
T d2ahra2           1 MKIGIIG-VGKMASAIIKGLKQTPHELIISGSSLERSKEIAEQL------ALPY--AMSHQDLIDQVDLVILGI   65 (152)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHTTSSCEEEEECSSHHHHHHHHHHH------TCCB--CSSHHHHHHTCSEEEECS
T ss_pred             CEEEEEe-ccHHHHHHHHHHHhCCCeEEEEcChHHhHHhhcccc------ceee--echhhhhhhccceeeeec
Confidence            7899998 899999999999999999999999887665543221      1112  234566677899999775

>d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Salmonella typhimurium [TaxId: 90371]

Probab=97.68  E-value=1.1e-05  Score=61.35  Aligned_cols=65  Identities=12%  Similarity=0.221  Sum_probs=51.5

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcCCCcEEEECCC
Q 018503           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG  125 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~  125 (355)
                      |||.|+| .|.+|..+++.|++.||+|++.+|++++...+....       ..  -.++..++++++|+||-|..
T Consensus         1 MkIgiIG-lG~MG~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~-------~~--~~~~~~e~~~~~d~ii~~v~   65 (161)
T d1vpda2           1 MKVGFIG-LGIMGKPMSKNLLKAGYSLVVSDRNPEAIADVIAAG-------AE--TASTAKAIAEQCDVIITMLP   65 (161)
T ss_dssp             CEEEEEC-CSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTT-------CE--ECSSHHHHHHHCSEEEECCS
T ss_pred             CEEEEEe-hhHHHHHHHHHHHHCCCeEEEEeCCcchhHHHHHhh-------hh--hcccHHHHHhCCCeEEEEcC
Confidence            7899999 899999999999999999999999988766554321       11  13455667778999998863

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.66  E-value=2e-05  Score=60.75  Aligned_cols=73  Identities=14%  Similarity=0.145  Sum_probs=51.9

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhh---hc--CCCcEEEECC
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRD---CI--QGSTAVVNLA  124 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~---~~--~~~d~vi~~a  124 (355)
                      ..+|||+||+|-+|...++.+...|.+|+++++++++.......+.   ..-+|..+.+..++   ..  +++|+|+.+.
T Consensus        29 g~~VlV~Ga~G~vG~~aiq~a~~~G~~vi~~~~~~~~~~~~~~~Ga---~~vi~~~~~~~~~~i~~~t~~~g~d~v~d~~  105 (174)
T d1yb5a2          29 GESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIVLQNGA---HEVFNHREVNYIDKIKKYVGEKGIDIIIEML  105 (174)
T ss_dssp             TCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTC---SEEEETTSTTHHHHHHHHHCTTCEEEEEESC
T ss_pred             CCEEEEEeccccccccccccccccCcccccccccccccccccccCc---ccccccccccHHHHhhhhhccCCceEEeecc
Confidence            4589999999999999999999999999999998766544433221   12244444443333   22  2589999987


Q ss_pred             C
Q 018503          125 G  125 (355)
Q Consensus       125 ~  125 (355)
                      +
T Consensus       106 g  106 (174)
T d1yb5a2         106 A  106 (174)
T ss_dssp             H
T ss_pred             c
Confidence            5

>d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=97.64  E-value=2.4e-05  Score=59.44  Aligned_cols=66  Identities=17%  Similarity=0.281  Sum_probs=52.0

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcCCCcEEEECCC
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG  125 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~  125 (355)
                      |+||.|+| .|.+|+.+++.|+++||+|++.+|+.++...+...         .........++++.+|+|+-+..
T Consensus         1 M~kIg~IG-lG~MG~~iA~~L~~~g~~v~~~d~~~~~~~~~~~~---------~~~~~~~~~e~~~~~diii~~v~   66 (162)
T d3cuma2           1 MKQIAFIG-LGHMGAPMATNLLKAGYLLNVFDLVQSAVDGLVAA---------GASAARSARDAVQGADVVISMLP   66 (162)
T ss_dssp             CCEEEEEC-CSTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHHT---------TCEECSSHHHHHTSCSEEEECCS
T ss_pred             CCEEEEEE-EHHHHHHHHHHHHHCCCeEEEEECchhhhhhhhhh---------hccccchhhhhccccCeeeeccc
Confidence            36899998 89999999999999999999999998776554432         11223456677888999998864

>d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Conserved hypothetical protein MTH1747
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=97.61  E-value=6.5e-05  Score=56.31  Aligned_cols=65  Identities=17%  Similarity=0.211  Sum_probs=49.1

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcCCCcEEEECCC
Q 018503           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG  125 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~  125 (355)
                      |||.|+| .|.+|+.+++.|+++||+|++.++..++.......       .+.+  .++..++++++|+||-+..
T Consensus         1 MkIgiIG-~G~mG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~-------~~~~--~~~~~e~~~~~diIi~~v~   65 (152)
T d1i36a2           1 LRVGFIG-FGEVAQTLASRLRSRGVEVVTSLEGRSPSTIERAR-------TVGV--TETSEEDVYSCPVVISAVT   65 (152)
T ss_dssp             CEEEEES-CSHHHHHHHHHHHHTTCEEEECCTTCCHHHHHHHH-------HHTC--EECCHHHHHTSSEEEECSC
T ss_pred             CEEEEEc-HHHHHHHHHHHHHHCCCeEEEEcCchhHHHHHhhh-------cccc--cccHHHHHhhcCeEEEEec
Confidence            7899998 79999999999999999999998877665433221       1222  2345677888999998863

>d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH
species: Lactobacillus confusus [TaxId: 1583]

Probab=97.59  E-value=6.3e-05  Score=55.72  Aligned_cols=113  Identities=12%  Similarity=0.118  Sum_probs=67.6

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhCC--CeEEEEecCCchhhccCCCCCCc-cC--CCeeecCCcchhhhcCCCcEEEECCC
Q 018503           51 MTVSVTGATGFIGRRLVQRLQADN--HQVRVLTRSRSKAELIFPGKKTR-FF--PGVMIAEEPQWRDCIQGSTAVVNLAG  125 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~-~~--~~~d~~~~~~~~~~~~~~d~vi~~a~  125 (355)
                      +||.|+| +|++|..++-.|+.+|  .++..+++++............. ..  ....+. .... +.++++|+||.+||
T Consensus         2 kKI~IIG-aG~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~~~Dl~~a~~~~~~~~~~~-~~d~-~~l~~adiVVitaG   78 (146)
T d1hyha1           2 RKIGIIG-LGNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIV-INDW-AALADADVVISTLG   78 (146)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEE-ESCG-GGGTTCSEEEECCS
T ss_pred             CeEEEEC-cCHHHHHHHHHHHhcCCCceEEEEecccchhhhHHHhhhccccccCCcccee-ccCH-HHhccccEEEEecc
Confidence            6899999 5999999999999877  48999998776532111000000 00  011111 1122 44689999999999


Q ss_pred             CCCCCC-CChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEE
Q 018503          126 TPIGTR-WSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLV  168 (355)
Q Consensus       126 ~~~~~~-~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~  168 (355)
                      .+.... .....-.+.+..|..-.+.+.+.+++  .+...++.+
T Consensus        79 ~~~~~~~~~g~~R~~l~~~N~~i~~~i~~~i~~--~~p~aiviv  120 (146)
T d1hyha1          79 NIKLQQDNPTGDRFAELKFTSSMVQSVGTNLKE--SGFHGVLVV  120 (146)
T ss_dssp             CGGGTC-------CTTHHHHHHHHHHHHHHHHH--TTCCSEEEE
T ss_pred             ccccccccCCccHHHHHHHHHHHHHHHHHHHhh--cCCCeEEEE
Confidence            642111 11112234567899999999998888  344444443

>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase
species: Arthrobacter, strain 1c [TaxId: 1663]

Probab=97.59  E-value=7.2e-05  Score=57.90  Aligned_cols=73  Identities=14%  Similarity=0.076  Sum_probs=49.8

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCc-cCCCee-----ecCCcchhhhcCCCcEEEECC
Q 018503           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTR-FFPGVM-----IAEEPQWRDCIQGSTAVVNLA  124 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~d-----~~~~~~~~~~~~~~d~vi~~a  124 (355)
                      |||.|+| +|.+|..++..|.++||+|.+++|+++............ .....+     .....+..+.++++|+||.+.
T Consensus         2 k~iaIiG-aG~~G~~~A~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~aD~iii~v   80 (184)
T d1bg6a2           2 KTYAVLG-LGNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLAVKDADVILIVV   80 (184)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHTSEEEESSSCCEEECCSEEESCHHHHHTTCSEEEECS
T ss_pred             CEEEEEC-ccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCCchhhhhhhhhhhhhhhhhhhHhHhcCCCEEEEEE
Confidence            7999999 599999999999999999999999876544332111000 000000     011234677888999999875

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.59  E-value=2.7e-05  Score=60.47  Aligned_cols=73  Identities=16%  Similarity=-0.005  Sum_probs=52.9

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchh---hhc--CCCcEEEECC
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWR---DCI--QGSTAVVNLA  124 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~---~~~--~~~d~vi~~a  124 (355)
                      ..+|||+||+|.+|...++.+...|.+|+++++++++.+.+...+.   ...++..+++..+   +..  +++|+||.+.
T Consensus        26 g~~VlI~ga~g~vG~~~iqla~~~g~~vi~~~~~~~~~~~l~~~Ga---~~vi~~~~~~~~~~v~~~t~~~g~d~v~d~~  102 (183)
T d1pqwa_          26 GERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLSRLGV---EYVGDSRSVDFADEILELTDGYGVDVVLNSL  102 (183)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHTTCC---SEEEETTCSTHHHHHHHHTTTCCEEEEEECC
T ss_pred             CCEEEEECCCCCcccccchhhccccccceeeecccccccccccccc---cccccCCccCHHHHHHHHhCCCCEEEEEecc
Confidence            4589999999999999999998899999999998876665554432   1123434443223   322  3689999998


Q ss_pred             C
Q 018503          125 G  125 (355)
Q Consensus       125 ~  125 (355)
                      +
T Consensus       103 g  103 (183)
T d1pqwa_         103 A  103 (183)
T ss_dssp             C
T ss_pred             c
Confidence            7

>d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=97.58  E-value=0.00044  Score=53.13  Aligned_cols=73  Identities=25%  Similarity=0.340  Sum_probs=51.1

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCch--hhccCCCCCC----ccCCCeeecCCcchhhhcCCCcEEEECC
Q 018503           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSK--AELIFPGKKT----RFFPGVMIAEEPQWRDCIQGSTAVVNLA  124 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~--~~~~~~~~~~----~~~~~~d~~~~~~~~~~~~~~d~vi~~a  124 (355)
                      |||.|+| +|..|.+++..|.+.|++|+..+|..+.  ..........    ......++.-.+++.++++++|+||.+.
T Consensus         1 MkI~ViG-aG~~GtalA~~la~~g~~V~l~~r~~~~~~~~~i~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ad~Ii~av   79 (180)
T d1txga2           1 MIVSILG-AGAMGSALSVPLVDNGNEVRIWGTEFDTEILKSISAGREHPRLGVKLNGVEIFWPEQLEKCLENAEVVLLGV   79 (180)
T ss_dssp             CEEEEES-CCHHHHHHHHHHHHHCCEEEEECCGGGHHHHHHHHTTCCBTTTTBCCCSEEEECGGGHHHHHTTCSEEEECS
T ss_pred             CEEEEEC-CCHHHHHHHHHHHHCCCEEEEEEecccHHHHHHHhhhhhhhhhcchhccccccccccHHHHHhccchhhccc
Confidence            7999999 6999999999999999999999986443  1111111000    0011233445667888899999999875

>d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=97.58  E-value=0.00014  Score=54.10  Aligned_cols=115  Identities=11%  Similarity=0.150  Sum_probs=69.9

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCC-CeEEEEecCCchhhccCCCCCCc-cC--CCeeecCCcchhhhcCCCcEEEECCC
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADN-HQVRVLTRSRSKAELIFPGKKTR-FF--PGVMIAEEPQWRDCIQGSTAVVNLAG  125 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~-~~--~~~d~~~~~~~~~~~~~~d~vi~~a~  125 (355)
                      ++||.|+|+ |.+|++++..|..++ .++..++++++............ .+  ....+.. ....+.++++|+||.+++
T Consensus         3 ~~KI~IIGa-G~VG~~~a~~l~~~~l~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~v~~-~~~~~~~~~advvvitag   80 (150)
T d1t2da1           3 KAKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSG-SNTYDDLAGADVVIVTAG   80 (150)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEE-ECCGGGGTTCSEEEECCS
T ss_pred             CCeEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccCCcceeeecchhhhccccCCCcEEEe-cccccccCCCcEEEEecc
Confidence            368999995 999999998887776 48888998776543221100000 00  0111111 122355688999999999


Q ss_pred             CCCCCC-C-ChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEE
Q 018503          126 TPIGTR-W-SSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLV  168 (355)
Q Consensus       126 ~~~~~~-~-~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~  168 (355)
                      ...... + ....-.+.+..|....+.+.+.+.+.  ..+.++.+
T Consensus        81 ~~~~~g~~~~~~~R~~l~~~N~~iv~~i~~~i~~~--~p~aiviv  123 (150)
T d1t2da1          81 FTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKN--CPNAFIIV  123 (150)
T ss_dssp             CSSCTTCCSTTCCGGGGHHHHHHHHHHHHHHHHHH--CTTSEEEE
T ss_pred             cccCCCCCccccchhHHHHHHHHHHHHHHHHHHhc--CCCeEEEE
Confidence            753211 1 11123456788999999999988883  33444443

>d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.56  E-value=8.2e-05  Score=55.82  Aligned_cols=102  Identities=14%  Similarity=0.222  Sum_probs=64.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCC--eEEEEecCCchhhc----cCCCCCCccCCCeeecCCcchhhhcCCCcEEEE
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNH--QVRVLTRSRSKAEL----IFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVN  122 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~----~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~  122 (355)
                      +..||.|+|+ |.+|.+++..|..+|.  ++..++++.+....    +.....  ....-......+. +.++++|+||.
T Consensus        18 ~~~KI~IIGa-G~VG~~~A~~l~~~~l~~elvL~D~~~~~a~g~alDl~~~~~--~~~~~~~~~~~d~-~~~~~adivvi   93 (159)
T d2ldxa1          18 SRCKITVVGV-GDVGMACAISILLKGLADELALVDADTDKLRGEALDLQHGSL--FLSTPKIVFGKDY-NVSANSKLVII   93 (159)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHTTTSCSEEEEECSCHHHHHHHHHHHHHTTT--TCSCCEEEEESSG-GGGTTEEEEEE
T ss_pred             CCCeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCchhhhccHHHHhCcch--hcCCCeEEeccch-hhhccccEEEE
Confidence            4468999995 9999999999999874  89999988654321    111000  0010011111223 44578999999


Q ss_pred             CCCCCCCCCCChhhHHHHHHHhhhhHHHHHHHHHc
Q 018503          123 LAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINE  157 (355)
Q Consensus       123 ~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~  157 (355)
                      +||.+....   ....+.++.|....+.+...+.+
T Consensus        94 tag~~~~~~---~~R~dll~~N~~i~~~i~~~i~~  125 (159)
T d2ldxa1          94 TAGARMVSG---QTRLDLLQRNVAIMKAIVPGVIQ  125 (159)
T ss_dssp             CCSCCCCTT---TCSSCTTHHHHHHHHHHTTTHHH
T ss_pred             ecccccCCC---CCHHHHHHHHHHHHHHHHHHHhc
Confidence            999753322   22235567788888888887776

>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=97.52  E-value=5.3e-05  Score=49.12  Aligned_cols=40  Identities=30%  Similarity=0.311  Sum_probs=36.0

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhc
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAEL   89 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~   89 (355)
                      .++|||+||+|-+|...++.+...|++|+++++++++.+.
T Consensus        32 ~~~vlI~gasGgVG~~aiQlak~~G~~Vi~~t~s~~k~~~   71 (77)
T d1o8ca2          32 DGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEY   71 (77)
T ss_dssp             GCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHH
T ss_pred             CCcEEEEeCCCcHHHHHHHHHHHcCCeEEEEECCHHHHHH
Confidence            4689999999999999999988899999999999877554

>d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Haemophilus influenzae [TaxId: 727]

Probab=97.52  E-value=5.6e-05  Score=56.68  Aligned_cols=37  Identities=19%  Similarity=0.325  Sum_probs=33.8

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCch
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSK   86 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~   86 (355)
                      ++||.|+||.|.+|+.+++.|.+.||+|.+.+|+...
T Consensus         9 ~~kI~iIGg~G~mG~~la~~L~~~G~~V~~~d~~~~~   45 (152)
T d2pv7a2           9 IHKIVIVGGYGKLGGLFARYLRASGYPISILDREDWA   45 (152)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCGG
T ss_pred             CCeEEEEcCCCHHHHHHHHHHHHcCCCcEeccccccc
Confidence            4689999999999999999999999999999997644

>d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Trypanosome (Leishmania mexicana) [TaxId: 5665]

Probab=97.52  E-value=3e-05  Score=60.46  Aligned_cols=76  Identities=18%  Similarity=0.242  Sum_probs=52.4

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCC-ccCCCe----eecCCcchhhhcCCCcEEEE
Q 018503           48 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKT-RFFPGV----MIAEEPQWRDCIQGSTAVVN  122 (355)
Q Consensus        48 ~~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~----d~~~~~~~~~~~~~~d~vi~  122 (355)
                      +.|+||.|+| +|..|++++..|.+.||+|+..+|+++....+...... ...+.+    ++.-..++.++++++|+||.
T Consensus         5 ~~m~KI~ViG-aG~wGtAlA~~La~~g~~V~l~~r~~~~~~~i~~~~~n~~yl~~~~l~~~i~~t~~l~~a~~~ad~iii   83 (189)
T d1n1ea2           5 LYLNKAVVFG-SGAFGTALAMVLSKKCREVCVWHMNEEEVRLVNEKRENVLFLKGVQLASNITFTSDVEKAYNGAEIILF   83 (189)
T ss_dssp             CCEEEEEEEC-CSHHHHHHHHHHHTTEEEEEEECSCHHHHHHHHHHTBCTTTSTTCBCCTTEEEESCHHHHHTTCSCEEE
T ss_pred             ceeceEEEEC-CCHHHHHHHHHHHHcCCeEEEEEecHHHHHHHhhcccccccccccccccccccchhhhhccCCCCEEEE
Confidence            3445899999 79999999999999999999999987654432211000 001112    22223467888999999998


Q ss_pred             CC
Q 018503          123 LA  124 (355)
Q Consensus       123 ~a  124 (355)
                      +.
T Consensus        84 av   85 (189)
T d1n1ea2          84 VI   85 (189)
T ss_dssp             CS
T ss_pred             cC
Confidence            75

>d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=97.48  E-value=0.00012  Score=52.71  Aligned_cols=70  Identities=10%  Similarity=0.144  Sum_probs=49.3

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcC-----CCcEEEECCC
Q 018503           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ-----GSTAVVNLAG  125 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-----~~d~vi~~a~  125 (355)
                      |||.|.|++|..|+.|++.+.++|+++.+....... ..+...     -.-+|++.++.+.+.++     +...|+-..|
T Consensus         1 mki~i~G~~GrMG~~i~~~~~~~~~~l~~~id~~~~-~~~~~~-----DVvIDFS~p~~~~~~l~~~~~~~~p~ViGTTG   74 (128)
T d1vm6a3           1 MKYGIVGYSGRMGQEIQKVFSEKGHELVLKVDVNGV-EELDSP-----DVVIDFSSPEALPKTVDLCKKYRAGLVLGTTA   74 (128)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEEETTEE-EECSCC-----SEEEECSCGGGHHHHHHHHHHHTCEEEECCCS
T ss_pred             CEEEEECCCCHHHHHHHHHHhcCCCeEEEEECCCcH-HHhccC-----CEEEEecCHHHHHHHHHHHHhcCCCEEEEcCC
Confidence            789999999999999999999999988765432221 111111     22378888887766553     6778887766


Q ss_pred             C
Q 018503          126 T  126 (355)
Q Consensus       126 ~  126 (355)
                      .
T Consensus        75 ~   75 (128)
T d1vm6a3          75 L   75 (128)
T ss_dssp             C
T ss_pred             C
Confidence            4

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=97.46  E-value=3.8e-05  Score=59.35  Aligned_cols=73  Identities=15%  Similarity=0.084  Sum_probs=54.3

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchh---hhc--CCCcEEEECC
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWR---DCI--QGSTAVVNLA  124 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~---~~~--~~~d~vi~~a  124 (355)
                      ..+|+|+||+|.+|...++.....|.+|+++++++++.+.....+.   ...+|..+++..+   ++.  .++|+|+.+.
T Consensus        29 g~~Vlv~ga~g~vG~~~iqlak~~Ga~Vi~~~~s~~k~~~~~~lGa---~~vi~~~~~d~~~~v~~~t~g~g~d~v~d~~  105 (179)
T d1qora2          29 DEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALKAGA---WQVINYREEDLVERLKEITGGKKVRVVYDSV  105 (179)
T ss_dssp             TCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHTC---SEEEETTTSCHHHHHHHHTTTCCEEEEEECS
T ss_pred             CCEEEEEccccccchHHHHHHHHhCCeEeecccchHHHHHHHhcCC---eEEEECCCCCHHHHHHHHhCCCCeEEEEeCc
Confidence            4689999999999999999999999999999999987665544332   2235555554333   333  2579999998


Q ss_pred             C
Q 018503          125 G  125 (355)
Q Consensus       125 ~  125 (355)
                      +
T Consensus       106 g  106 (179)
T d1qora2         106 G  106 (179)
T ss_dssp             C
T ss_pred             c
Confidence            6

>d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Short chain L-3-hydroxyacyl CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.44  E-value=0.00018  Score=56.04  Aligned_cols=76  Identities=20%  Similarity=0.253  Sum_probs=50.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCC-------C-ccCCC------------eeecCCc
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKK-------T-RFFPG------------VMIAEEP  108 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-------~-~~~~~------------~d~~~~~  108 (355)
                      +-+||.|+|| |.+|+.++..++..||+|++++++++..........       . .....            ..+.-..
T Consensus         3 ~IkkvaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~l~~a~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~   81 (192)
T d1f0ya2           3 IVKHVTVIGG-GLMGAGIAQVAAATGHTVVLVDQTEDILAKSKKGIEESLRKVAKKKFAENPKAGDEFVEKTLSTIATST   81 (192)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHTEEEES
T ss_pred             eeEEEEEECc-CHHHHHHHHHHHhCCCcEEEEECChHHHHHHHhhHHHHHHHHHHhhhhccchhhHHHHHHHHhhccccc
Confidence            4469999995 999999999999999999999999865332111000       0 00000            0112233


Q ss_pred             chhhhcCCCcEEEECCC
Q 018503          109 QWRDCIQGSTAVVNLAG  125 (355)
Q Consensus       109 ~~~~~~~~~d~vi~~a~  125 (355)
                      ++.++++++|.||-+..
T Consensus        82 d~~~a~~~ad~ViEav~   98 (192)
T d1f0ya2          82 DAASVVHSTDLVVEAIV   98 (192)
T ss_dssp             CHHHHTTSCSEEEECCC
T ss_pred             hhHhhhcccceehhhcc
Confidence            55677889999999974

>d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Neisseria meningitidis, serogroup B [TaxId: 487]

Probab=97.41  E-value=6e-05  Score=56.52  Aligned_cols=64  Identities=16%  Similarity=0.182  Sum_probs=46.7

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhCC-CeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcCCCcEEEECC
Q 018503           51 MTVSVTGATGFIGRRLVQRLQADN-HQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLA  124 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a  124 (355)
                      |||.++| +|.+|+++++.|++.| ++|++.+|++++...+....      .+...+..   +.++++|+||.+.
T Consensus         1 MkI~fIG-~G~MG~ai~~~l~~~~~~~i~v~~r~~~~~~~l~~~~------~~~~~~~~---~~v~~~Div~lav   65 (152)
T d1yqga2           1 MNVYFLG-GGNMAAAVAGGLVKQGGYRIYIANRGAEKRERLEKEL------GVETSATL---PELHSDDVLILAV   65 (152)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHHCSCEEEEECSSHHHHHHHHHHT------CCEEESSC---CCCCTTSEEEECS
T ss_pred             CEEEEEc-CcHHHHHHHHHHHHCCCCcEEEEeCChhHHHHhhhhc------cccccccc---ccccccceEEEec
Confidence            7899999 6999999999999877 99999999987766554321      12332221   1246689999774

>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD
species: Escherichia coli [TaxId: 562]

Probab=97.40  E-value=0.00036  Score=47.20  Aligned_cols=70  Identities=17%  Similarity=0.200  Sum_probs=47.9

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhc-cCCCCCCccCCCeeecCCcchhhhcCCCcEEEECCCCC
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAEL-IFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTP  127 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~~  127 (355)
                      ++||+|+|. |-.|..+++.|.+.|++|++.+.+...... ....     ...+.+...+  ...+.++|.||..-|.+
T Consensus         5 ~K~v~ViGl-G~sG~s~a~~L~~~g~~v~~~D~~~~~~~~~~~~~-----~~~~~~~~~~--~~~~~~~d~vi~SPGi~   75 (93)
T d2jfga1           5 GKNVVIIGL-GLTGLSCVDFFLARGVTPRVMDTRMTPPGLDKLPE-----AVERHTGSLN--DEWLMAADLIVASPGIA   75 (93)
T ss_dssp             TCCEEEECC-SHHHHHHHHHHHHTTCCCEEEESSSSCTTGGGSCT-----TSCEEESBCC--HHHHHHCSEEEECTTSC
T ss_pred             CCEEEEEeE-CHHHHHHHHHHHHCCCEEEEeeCCcCchhHHHHhh-----ccceeecccc--hhhhccCCEEEECCCCC
Confidence            478999995 999999999999999999999987653321 1111     1112222211  23456789999988764

>d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Sheep (Ovis orientalis aries) [TaxId: 9940]

Probab=97.35  E-value=0.00032  Score=53.80  Aligned_cols=73  Identities=11%  Similarity=0.177  Sum_probs=54.4

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcCCCcEEEECCC
Q 018503           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG  125 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~  125 (355)
                      .+|.|+| .|.+|..+++.|++.||+|++.+|++++...+....... .........+++...+..+|.++-+..
T Consensus         3 ~nIg~IG-lG~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~-~~~~~a~~~~~~~~~~~~~~~ii~~~~   75 (176)
T d2pgda2           3 ADIALIG-LAVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLANEAKG-TKVLGAHSLEEMVSKLKKPRRIILLVK   75 (176)
T ss_dssp             BSEEEEC-CSHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHHTTTTT-SSCEECSSHHHHHHHBCSSCEEEECSC
T ss_pred             CcEEEEe-EhHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHhcccc-ccccchhhhhhhhhhhcccceEEEecC
Confidence            4799999 799999999999999999999999998876654332100 111223455677777888999988753

>d1u7za_ c.72.3.1 (A:) Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB)
species: Escherichia coli [TaxId: 562]

Probab=97.32  E-value=0.00023  Score=56.73  Aligned_cols=64  Identities=13%  Similarity=0.136  Sum_probs=43.9

Q ss_pred             cCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchh----hhcCCCcEEEECCCCC
Q 018503           57 GATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWR----DCIQGSTAVVNLAGTP  127 (355)
Q Consensus        57 GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~----~~~~~~d~vi~~a~~~  127 (355)
                      -+||..|.+|++.+..+|++|+.+.........  ..     ...+.+...+++.    +.++++|++|++|+..
T Consensus        29 ~SSGk~G~aiA~~~~~~Ga~V~li~g~~~~~~p--~~-----~~~~~~~t~~~m~~~~~~~~~~~D~~i~aAAvs   96 (223)
T d1u7za_          29 HSSGKMGFAIAAAAARRGANVTLVSGPVSLPTP--PF-----VKRVDVMTALEMEAAVNASVQQQNIFIGCAAVA   96 (223)
T ss_dssp             CCCSHHHHHHHHHHHHTTCEEEEEECSCCCCCC--TT-----EEEEECCSHHHHHHHHHHHGGGCSEEEECCBCC
T ss_pred             CCcHHHHHHHHHHHHHcCCchhhhhcccccCcc--cc-----cccceehhhHHHHHHHHhhhccceeEeeeechh
Confidence            358999999999999999999999886543211  00     1123333444433    3446899999999974

>d2gz1a1 c.2.1.3 (A:2-127,A:330-357) Aspartate beta-semialdehyde dehydrogenase {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=97.32  E-value=0.00022  Score=53.33  Aligned_cols=67  Identities=27%  Similarity=0.348  Sum_probs=39.5

Q ss_pred             EEEEEcCCchHHHHHHHHHHhCCC---eEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcCCCcEEEECCC
Q 018503           52 TVSVTGATGFIGRRLVQRLQADNH---QVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG  125 (355)
Q Consensus        52 ~IlVtGatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~  125 (355)
                      ||.|+||||++|..|++.|.++.+   ++..+..+.+........     ..  .....+.....+.+.|.++.+++
T Consensus         3 kVaIvGATGyvG~eLirlL~~H~fp~~~l~~~~s~~s~G~~~~~~-----~~--~~~~~~~~~~~~~~~d~~f~~~~   72 (154)
T d2gz1a1           3 TVAVVGATGAVGAQMIKMLEESTLPIDKIRYLASARSAGKSLKFK-----DQ--DITIEETTETAFEGVDIALFSAG   72 (154)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTCCSCEEEEEEEECGGGTTCEEEET-----TE--EEEEEECCTTTTTTCSEEEECSC
T ss_pred             EEEEECCCcHHHHHHHHHHHcCCCCceEEEEeccccccccccccc-----CC--cccccccchhhhhhhhhhhhccC
Confidence            799999999999999999988854   444444332222221111     11  11111222234457899888875

>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=97.28  E-value=0.00016  Score=55.38  Aligned_cols=74  Identities=22%  Similarity=0.122  Sum_probs=49.9

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCC-cchhhhc--CCCcEEEECCCC
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEE-PQWRDCI--QGSTAVVNLAGT  126 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~-~~~~~~~--~~~d~vi~~a~~  126 (355)
                      ..+|||.||+|-+|...++.....|.+|+++++++++.......+.   ...+|..+. ++..+..  +++|+||.+.|-
T Consensus        32 g~~VLI~gaaGGVG~~aiQlak~~Ga~Viat~~s~~k~~~~~~lGa---~~vi~~~~~~~~~~~~~~~~gvD~vid~vgg  108 (176)
T d1xa0a2          32 RGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLRVLGA---KEVLAREDVMAERIRPLDKQRWAAAVDPVGG  108 (176)
T ss_dssp             GCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHHHTTC---SEEEECC---------CCSCCEEEEEECSTT
T ss_pred             CCEEEEEeccchHHHHHHHHHHHcCCceEEecCchHHHHHHHhccc---ceeeecchhHHHHHHHhhccCcCEEEEcCCc
Confidence            3579999999999999999999999999999999887665544322   111222111 1111222  378999999874

>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=97.25  E-value=7.7e-05  Score=57.35  Aligned_cols=72  Identities=21%  Similarity=0.117  Sum_probs=50.3

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcC-CCcEEEECCC
Q 018503           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ-GSTAVVNLAG  125 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-~~d~vi~~a~  125 (355)
                      .+|||+||+|-+|...++.....|.+|+++++++++.......+.   ...+|..+.+..+.+.+ ..|.+|++.+
T Consensus        33 ~~vlV~gasGGVG~~aiQlAk~~Ga~Via~~~~~~k~~~~~~lGa---d~vi~~~~~~~~~~l~~~~~~~vvD~Vg  105 (177)
T d1o89a2          33 GEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYLKSLGA---SRVLPRDEFAESRPLEKQVWAGAIDTVG  105 (177)
T ss_dssp             CEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHHHHTE---EEEEEGGGSSSCCSSCCCCEEEEEESSC
T ss_pred             CcEEEEEccccchHHHHHHHHHcCCCeEEEecchhHHHHHHhhcc---ccccccccHHHHHHHHhhcCCeeEEEcc
Confidence            379999999999999999999999999999999888665543321   11133323322222222 3689998876

>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=97.24  E-value=5.2e-05  Score=57.72  Aligned_cols=73  Identities=23%  Similarity=0.165  Sum_probs=50.0

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecC--Ccchhhhc-CCCcEEEECCCC
Q 018503           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAE--EPQWRDCI-QGSTAVVNLAGT  126 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~-~~~d~vi~~a~~  126 (355)
                      .+|||+||+|-+|...++.....|.+|+++++++++...+.....   ...++..+  .+.+...- +++|+|+.+.+-
T Consensus        25 ~~VLV~gaaGgVG~~avQlAk~~Ga~Viat~~s~~k~~~~~~lGa---d~vi~~~~~~~~~~~~~~~~gvd~vid~vgg  100 (167)
T d1tt7a2          25 GSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYLKQLGA---SEVISREDVYDGTLKALSKQQWQGAVDPVGG  100 (167)
T ss_dssp             CCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHHHHHTC---SEEEEHHHHCSSCCCSSCCCCEEEEEESCCT
T ss_pred             CEEEEeCCcchHHHHHHHHHHHcCCceEEEecCHHHHHHHHhhcc---cceEeccchhchhhhcccCCCceEEEecCcH
Confidence            469999999999999999888899999999999887665544322   11111111  11111111 368999999873

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=97.17  E-value=0.00022  Score=54.25  Aligned_cols=73  Identities=18%  Similarity=0.097  Sum_probs=52.6

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcCCCcEEEECCCC
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT  126 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~  126 (355)
                      ..+|+|.|+ |-+|...++.+...|.+++++++++++.......+.   ...+|..+.+......+++|++|.+.+.
T Consensus        31 G~~VlI~Ga-G~vG~~a~qlak~~Ga~~i~~~~~~~~~~~a~~lGa---d~~i~~~~~~~~~~~~~~~D~vid~~g~  103 (168)
T d1uufa2          31 GKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKREAAKALGA---DEVVNSRNADEMAAHLKSFDFILNTVAA  103 (168)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHTC---SEEEETTCHHHHHTTTTCEEEEEECCSS
T ss_pred             CCEEEEecc-chHHHHHHHHhhcccccchhhccchhHHHHHhccCC---cEEEECchhhHHHHhcCCCceeeeeeec
Confidence            468999985 889999999999899999999998876543332221   1124444455555555789999999874

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=97.13  E-value=0.00044  Score=52.51  Aligned_cols=73  Identities=21%  Similarity=0.091  Sum_probs=51.5

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcc-hhhhcCCCcEEEECCCC
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQ-WRDCIQGSTAVVNLAGT  126 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~-~~~~~~~~d~vi~~a~~  126 (355)
                      ..+|+|+|+ |.+|...++.+...|.+|+++++++++.+.....+.   ...++..+.+. .++...++|+++.+.+.
T Consensus        28 g~~vlI~Ga-G~vG~~a~q~ak~~G~~vi~~~~~~~k~~~a~~lGa---~~~i~~~~~~~~~~~~~~~~d~vi~~~~~  101 (168)
T d1piwa2          28 GKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDAMKMGA---DHYIATLEEGDWGEKYFDTFDLIVVCASS  101 (168)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHHTC---SEEEEGGGTSCHHHHSCSCEEEEEECCSC
T ss_pred             CCEEEEECC-CCcchhHHHHhhhccccccccccchhHHHHhhccCC---cEEeeccchHHHHHhhhcccceEEEEecC
Confidence            468999986 999999999888889999999999887654433221   11234333333 44445678999998775

>d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Escherichia coli [TaxId: 562]

Probab=97.05  E-value=0.00037  Score=53.09  Aligned_cols=73  Identities=14%  Similarity=0.103  Sum_probs=50.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcCCCcEEEECCCC
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT  126 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~  126 (355)
                      ..++|+|+| +|..+++++..|.+.|.+|+++.|+.++...+......  ...+...+.+..  ...++|+||++...
T Consensus        17 ~~k~vlIlG-aGGaarai~~al~~~g~~i~I~nRt~~ka~~l~~~~~~--~~~~~~~~~~~~--~~~~~dliIN~Tp~   89 (170)
T d1nyta1          17 PGLRILLIG-AGGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAH--TGSIQALSMDEL--EGHEFDLIINATSS   89 (170)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGG--GSSEEECCSGGG--TTCCCSEEEECCSC
T ss_pred             CCCEEEEEC-CcHHHHHHHHHhcccceEEEeccchHHHHHHHHHHHhh--cccccccccccc--cccccceeeccccc
Confidence            357999999 58899999999999999999999998876654332110  111222222222  23578999999764

>d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Siroheme synthase CysG, domain 1
species: Salmonella typhimurium [TaxId: 90371]

Probab=97.01  E-value=0.001  Score=46.62  Aligned_cols=71  Identities=10%  Similarity=0.066  Sum_probs=49.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcCCCcEEEECCC
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG  125 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~  125 (355)
                      .+++|+|+| .|.+|..-++.|++.|.+|++++............     ...+.+.....-...+.+++.|+.+.+
T Consensus        11 ~~k~vlVvG-~G~va~~ka~~ll~~ga~v~v~~~~~~~~~~~~~~-----~~~i~~~~~~~~~~dl~~~~lv~~at~   81 (113)
T d1pjqa1          11 RDRDCLIVG-GGDVAERKARLLLEAGARLTVNALTFIPQFTVWAN-----EGMLTLVEGPFDETLLDSCWLAIAATD   81 (113)
T ss_dssp             BTCEEEEEC-CSHHHHHHHHHHHHTTBEEEEEESSCCHHHHHHHT-----TTSCEEEESSCCGGGGTTCSEEEECCS
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCeEEEEeccCChHHHHHHh-----cCCceeeccCCCHHHhCCCcEEeecCC
Confidence            357999999 69999999999999999999998766543322111     122344433333445678898887754

>d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Putative formate dehydrogenase
species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]

Probab=96.95  E-value=0.0012  Score=50.62  Aligned_cols=62  Identities=24%  Similarity=0.233  Sum_probs=49.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcCCCcEEEECCCC
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT  126 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~  126 (355)
                      ..++|.|.| .|.||+.+++.|..-|.+|++.+|++....               ..-.++++++++.+|+|+.+...
T Consensus        41 ~gk~vgIiG-~G~IG~~va~~l~~~g~~v~~~d~~~~~~~---------------~~~~~~l~ell~~sDiv~~~~pl  102 (181)
T d1qp8a1          41 QGEKVAVLG-LGEIGTRVGKILAALGAQVRGFSRTPKEGP---------------WRFTNSLEEALREARAAVCALPL  102 (181)
T ss_dssp             TTCEEEEES-CSTHHHHHHHHHHHTTCEEEEECSSCCCSS---------------SCCBSCSHHHHTTCSEEEECCCC
T ss_pred             cCceEEEec-cccccccceeeeeccccccccccccccccc---------------eeeeechhhhhhccchhhccccc
Confidence            457999999 899999999999999999999998764311               11124678889999999877654

>d1f06a1 c.2.1.3 (A:1-118,A:269-320) Diaminopimelic acid dehydrogenase (DAPDH) {Corynebacterium glutamicum [TaxId: 1718]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Diaminopimelic acid dehydrogenase (DAPDH)
species: Corynebacterium glutamicum [TaxId: 1718]

Probab=96.94  E-value=0.00098  Score=50.60  Aligned_cols=66  Identities=11%  Similarity=0.186  Sum_probs=44.5

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHhC-CCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcCCCcEEEECCC
Q 018503           48 ASQMTVSVTGATGFIGRRLVQRLQAD-NHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG  125 (355)
Q Consensus        48 ~~~~~IlVtGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~  125 (355)
                      |+++||.|.| +|++|+.+++.|.+. +.+++++.........         .  ......++...+..++|+|+.+..
T Consensus         1 M~kirvgiiG-~G~ig~~~~~~l~~~~~~elvav~~~~~~~~~---------~--~~~~~~~~~~~~~~~~D~Vvi~tp   67 (170)
T d1f06a1           1 MTNIRVAIVG-YGNLGRSVEKLIAKQPDMDLVGIFSRRATLDT---------K--TPVFDVADVDKHADDVDVLFLCMG   67 (170)
T ss_dssp             CCCEEEEEEC-CSHHHHHHHHHHTTCSSEEEEEEEESSSCCSS---------S--SCEEEGGGGGGTTTTCSEEEECSC
T ss_pred             CCcceEEEEC-ChHHHHHHHHHHHhCCCcEEEEEEeccccccc---------c--cccccchhhhhhccccceEEEeCC
Confidence            3457999999 799999999999886 6788876554432111         1  122223344555678999998865

>d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Trypanosoma brucei [TaxId: 5691]

Probab=96.85  E-value=0.00032  Score=53.89  Aligned_cols=73  Identities=21%  Similarity=0.344  Sum_probs=49.1

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCC-ccCCCee-ecCCcchhhhcCCCcEEEECC
Q 018503           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKT-RFFPGVM-IAEEPQWRDCIQGSTAVVNLA  124 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~d-~~~~~~~~~~~~~~d~vi~~a  124 (355)
                      |||.|+| .|.+|.++++.|+++||+|++.+|++++...+...... ....... ..+.+.+...+...+.++-+.
T Consensus         2 MkIGvIG-lG~MG~~ma~~L~~~G~~V~~~dr~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (178)
T d1pgja2           2 MDVGVVG-LGVMGANLALNIAEKGFKVAVFNRTYSKSEEFMKANASAPFAGNLKAFETMEAFAASLKKPRKALILV   76 (178)
T ss_dssp             BSEEEEC-CSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTTTSTTGGGEEECSCHHHHHHHBCSSCEEEECC
T ss_pred             CEEEEEe-ehHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHcCCccccccchhhhhhhhHHHHhcccceEEEEee
Confidence            7899999 99999999999999999999999998877655332110 0011111 123334555556666666554

>d1dlja2 c.2.1.6 (A:1-196) UDP-glucose dehydrogenase (UDPGDH) {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: UDP-glucose dehydrogenase (UDPGDH)
species: Streptococcus pyogenes [TaxId: 1314]

Probab=96.81  E-value=0.0013  Score=51.22  Aligned_cols=39  Identities=28%  Similarity=0.438  Sum_probs=32.8

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccC
Q 018503           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIF   91 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~   91 (355)
                      |||.|+| .|++|..++..| ++||+|++++-++.....+.
T Consensus         1 MkI~ViG-lG~vGl~~a~~~-a~g~~V~g~Din~~~v~~l~   39 (196)
T d1dlja2           1 MKIAVAG-SGYVGLSLGVLL-SLQNEVTIVDILPSKVDKIN   39 (196)
T ss_dssp             CEEEEEC-CSHHHHHHHHHH-TTTSEEEEECSCHHHHHHHH
T ss_pred             CEEEEEC-CChhHHHHHHHH-HCCCcEEEEECCHHHHHHHh
Confidence            7999998 899999998755 57999999999887655543

>d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Fatty oxidation complex alpha subunit, middle domain
species: Pseudomonas fragi [TaxId: 296]

Probab=96.80  E-value=0.00044  Score=53.43  Aligned_cols=36  Identities=14%  Similarity=0.230  Sum_probs=32.8

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchh
Q 018503           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKA   87 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~   87 (355)
                      +||.|+|| |.+|+.++..++..|++|++++++++..
T Consensus         5 ~~vaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~l   40 (186)
T d1wdka3           5 KQAAVLGA-GIMGGGIAYQSASKGTPILMKDINEHGI   40 (186)
T ss_dssp             SSEEEECC-HHHHHHHHHHHHHTTCCEEEECSSHHHH
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCeEEEEECCHHHH
Confidence            57999995 9999999999999999999999987653

>d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Haemophilus influenzae [TaxId: 727]

Probab=96.76  E-value=0.00038  Score=52.99  Aligned_cols=73  Identities=14%  Similarity=0.128  Sum_probs=49.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcCCCcEEEECCCC
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT  126 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~  126 (355)
                      ..++|+|.| +|..|++++..|.+.+-+|+++.|+.++...+.....  ....+...+.+  ...+.++|+||++...
T Consensus        17 ~~k~vlIlG-aGGaarai~~aL~~~~~~i~I~nR~~~~a~~l~~~~~--~~~~~~~~~~~--~~~~~~~diiIN~tp~   89 (171)
T d1p77a1          17 PNQHVLILG-AGGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQ--PYGNIQAVSMD--SIPLQTYDLVINATSA   89 (171)
T ss_dssp             TTCEEEEEC-CSHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHG--GGSCEEEEEGG--GCCCSCCSEEEECCCC
T ss_pred             CCCEEEEEC-CcHHHHHHHHHHcccCceeeeccchHHHHHHHHHHHh--hccccchhhhc--cccccccceeeecccc
Confidence            347899999 6888999999999988899999999877665433210  01111111111  1235689999999764

>d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase-like protein HI0607
species: Haemophilus influenzae [TaxId: 727]

Probab=96.75  E-value=0.00067  Score=51.36  Aligned_cols=66  Identities=15%  Similarity=0.260  Sum_probs=46.7

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCC-eEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcCCCcEEEECCCC
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT  126 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~  126 (355)
                      .++|+|+| +|..|++++..|.+.|. +|+++.|+.++...+...     +....+ +.  +  ...++|+|||+...
T Consensus        17 ~~~vlIlG-aGGaarai~~aL~~~g~~~I~I~nR~~~ka~~L~~~-----~~~~~~-~~--~--~~~~~DliINaTpi   83 (167)
T d1npya1          17 NAKVIVHG-SGGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAAL-----YGYAYI-NS--L--ENQQADILVNVTSI   83 (167)
T ss_dssp             TSCEEEEC-SSTTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHH-----HTCEEE-SC--C--TTCCCSEEEECSST
T ss_pred             CCeEEEEC-CCHHHHHHHHHHHHCCCCEEEEecccHHHHHHHHHh-----hhhhhh-hc--c--cccchhhheecccc
Confidence            46899999 59999999999999996 899999998876654332     111111 11  1  12468999998654

>d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-lactate dehydrogenase
species: Lactobacillus helveticus [TaxId: 1587]

Probab=96.72  E-value=0.00075  Score=52.44  Aligned_cols=65  Identities=17%  Similarity=0.089  Sum_probs=48.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcCCCcEEEECCCC
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT  126 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~  126 (355)
                      ..++|.|.| .|.||+.+++.|..-|.+|++.++..+.....            +....++++++++.+|+|+.+...
T Consensus        42 ~gk~vgIiG-~G~IG~~va~~l~~fg~~V~~~d~~~~~~~~~------------~~~~~~~l~~~l~~sDii~~~~pl  106 (197)
T d1j4aa1          42 RDQVVGVVG-TGHIGQVFMQIMEGFGAKVITYDIFRNPELEK------------KGYYVDSLDDLYKQADVISLHVPD  106 (197)
T ss_dssp             GGSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCCHHHHH------------TTCBCSCHHHHHHHCSEEEECSCC
T ss_pred             cCCeEEEec-ccccchhHHHhHhhhcccccccCccccccccc------------ceeeeccccccccccccccccCCc
Confidence            347999999 89999999999999999999998765543221            112345677788888988776643

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=96.72  E-value=0.0014  Score=50.34  Aligned_cols=73  Identities=21%  Similarity=0.136  Sum_probs=49.8

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCC-eEEEEecCCchhhccCCCCCCccCCCeeecCCc------chhhhc--CCCcEE
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEP------QWRDCI--QGSTAV  120 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~------~~~~~~--~~~d~v  120 (355)
                      ..+|||+|+ |-+|...++.+...|. +|+++++++++.+.....+.   ...++..+.+      .+.+..  .++|+|
T Consensus        29 G~~VlV~Ga-G~iG~~~~~~ak~~Ga~~Vi~~~~~~~~~~~a~~lGa---~~vi~~~~~~~~~~~~~i~~~~~~~g~Dvv  104 (182)
T d1vj0a2          29 GKTVVIQGA-GPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEEIGA---DLTLNRRETSVEERRKAIMDITHGRGADFI  104 (182)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHHTTC---SEEEETTTSCHHHHHHHHHHHTTTSCEEEE
T ss_pred             CCEEEEECC-Cccchhheecccccccccccccccccccccccccccc---eEEEeccccchHHHHHHHHHhhCCCCceEE
Confidence            468999996 9999999999999997 79999998877654433221   1123333332      122322  268999


Q ss_pred             EECCCC
Q 018503          121 VNLAGT  126 (355)
Q Consensus       121 i~~a~~  126 (355)
                      |.+.|.
T Consensus       105 id~vG~  110 (182)
T d1vj0a2         105 LEATGD  110 (182)
T ss_dssp             EECSSC
T ss_pred             eecCCc
Confidence            999874

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=96.71  E-value=0.0022  Score=48.43  Aligned_cols=73  Identities=23%  Similarity=0.179  Sum_probs=48.3

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeec----CCcchhhhc-----CCCcEE
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIA----EEPQWRDCI-----QGSTAV  120 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~----~~~~~~~~~-----~~~d~v  120 (355)
                      ..+|+|+| +|-+|...++.+...|.+|+++++++.+.+.......   ...+...    +.+.+.+.+     .++|+|
T Consensus        27 g~~vlV~G-~G~vG~~~~~~ak~~Ga~vi~v~~~~~r~~~a~~~ga---~~~~~~~~~~~~~~~~~~~~~~~~g~g~D~v  102 (170)
T d1e3ja2          27 GTTVLVIG-AGPIGLVSVLAAKAYGAFVVCTARSPRRLEVAKNCGA---DVTLVVDPAKEEESSIIERIRSAIGDLPNVT  102 (170)
T ss_dssp             TCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTC---SEEEECCTTTSCHHHHHHHHHHHSSSCCSEE
T ss_pred             CCEEEEEc-ccccchhhHhhHhhhcccccccchHHHHHHHHHHcCC---cEEEeccccccccchhhhhhhcccccCCcee
Confidence            35899997 7999999999998899999999999887654333211   0001111    111222222     368999


Q ss_pred             EECCCC
Q 018503          121 VNLAGT  126 (355)
Q Consensus       121 i~~a~~  126 (355)
                      |.++|.
T Consensus       103 id~~g~  108 (170)
T d1e3ja2         103 IDCSGN  108 (170)
T ss_dssp             EECSCC
T ss_pred             eecCCC
Confidence            999874

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=96.71  E-value=0.00057  Score=51.93  Aligned_cols=74  Identities=19%  Similarity=0.128  Sum_probs=51.1

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCC-CeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhc-----CCCcEEEEC
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADN-HQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCI-----QGSTAVVNL  123 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~-----~~~d~vi~~  123 (355)
                      ..+|+|+|++|-+|...++.+...| .+|+++++++++.......+.   ...++..+.+..++..     .++|+||.+
T Consensus        28 g~~vlV~G~~G~vG~~~~~~~~~~g~~~V~~~~~~~~~~~~~~~~Ga---~~~i~~~~~~~~~~~~~~~~~~~~d~vid~  104 (170)
T d1jvba2          28 TKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGA---DYVINASMQDPLAEIRRITESKGVDAVIDL  104 (170)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHHHTC---SEEEETTTSCHHHHHHHHTTTSCEEEEEES
T ss_pred             CCEEEEEeccccceeeeeecccccccccccccccchhhHHHHHHcCC---ceeeccCCcCHHHHHHHHhhcccchhhhcc
Confidence            3589999999999999999999888 589999988876554433221   1123434444333332     358999999


Q ss_pred             CCC
Q 018503          124 AGT  126 (355)
Q Consensus       124 a~~  126 (355)
                      ++.
T Consensus       105 ~g~  107 (170)
T d1jvba2         105 NNS  107 (170)
T ss_dssp             CCC
T ss_pred             ccc
Confidence            874

>d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Thermotoga maritima [TaxId: 2336]

Probab=96.63  E-value=0.007  Score=40.00  Aligned_cols=70  Identities=11%  Similarity=0.072  Sum_probs=46.1

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcCCCcEEEECCCCC
Q 018503           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTP  127 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~~  127 (355)
                      |||.++|-.|-==+.|++.|.++|+.|.+.++........+..      .++.+.-... .+-+.++|.||...+.+
T Consensus         2 ~~ihfiGIgG~GMs~LA~~L~~~G~~VsGSD~~~~~~t~~L~~------~Gi~i~~gh~-~~~i~~~d~vV~SsAI~   71 (89)
T d1j6ua1           2 MKIHFVGIGGIGMSAVALHEFSNGNDVYGSNIEETERTAYLRK------LGIPIFVPHS-ADNWYDPDLVIKTPAVR   71 (89)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHHH------TTCCEESSCC-TTSCCCCSEEEECTTCC
T ss_pred             cEEEEEeECHHHHHHHHHHHHhCCCeEEEEeCCCChhHHHHHH------CCCeEEeeec-ccccCCCCEEEEecCcC
Confidence            7999998655444579999999999999999987543332221      1123321111 12236799999998874

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.60  E-value=0.0033  Score=47.56  Aligned_cols=72  Identities=19%  Similarity=0.059  Sum_probs=48.4

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCC-eEEEEecCCchhhccCCCCCCccCCCeeecCCcch---hhhc-----CCCcEE
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQW---RDCI-----QGSTAV  120 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~---~~~~-----~~~d~v  120 (355)
                      ..+|+|+|+ |-+|...++.+...|. +|+++++++.+.....+.+    ...+...+.++.   .+.+     .++|+|
T Consensus        27 gd~VlI~G~-G~iG~~~~~~a~~~G~~~Vi~~d~~~~rl~~a~~~G----a~~~~~~~~~~~~~~~~~~~~~~g~g~Dvv  101 (171)
T d1pl8a2          27 GHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIG----ADLVLQISKESPQEIARKVEGQLGCKPEVT  101 (171)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTT----CSEEEECSSCCHHHHHHHHHHHHTSCCSEE
T ss_pred             CCEEEEECC-CccHHHHHHHHHHcCCceEEeccCCHHHHHHHHHhC----CcccccccccccccccccccccCCCCceEE
Confidence            358999985 9999999999999998 7999999987765433322    111222222222   2222     378999


Q ss_pred             EECCCC
Q 018503          121 VNLAGT  126 (355)
Q Consensus       121 i~~a~~  126 (355)
                      |.+.|.
T Consensus       102 id~~G~  107 (171)
T d1pl8a2         102 IECTGA  107 (171)
T ss_dssp             EECSCC
T ss_pred             EeccCC
Confidence            999874

>d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Transcription corepressor CtbP
species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]

Probab=96.59  E-value=0.0016  Score=50.39  Aligned_cols=67  Identities=18%  Similarity=0.151  Sum_probs=48.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcCCCcEEEECCCC
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT  126 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~  126 (355)
                      ..++|.|+| .|.||+.+++.|..-|.+|++.++........          ...+...++++++++.+|+|+.+...
T Consensus        48 ~gktvgIiG-~G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~----------~~~~~~~~~l~~ll~~sD~i~~~~pl  114 (193)
T d1mx3a1          48 RGETLGIIG-LGRVGQAVALRAKAFGFNVLFYDPYLSDGVER----------ALGLQRVSTLQDLLFHSDCVTLHCGL  114 (193)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECTTSCTTHHH----------HHTCEECSSHHHHHHHCSEEEECCCC
T ss_pred             eCceEEEec-cccccccceeeeeccccceeeccCcccccchh----------hhccccccchhhccccCCEEEEeecc
Confidence            457999999 89999999999999999999999875432211          11223345677777778887766543

>d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.58  E-value=0.0028  Score=45.65  Aligned_cols=72  Identities=21%  Similarity=0.240  Sum_probs=47.6

Q ss_pred             EEEEEcCCchHHHHHHHHHHhC-CCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhc-----CCCcEEEECCC
Q 018503           52 TVSVTGATGFIGRRLVQRLQAD-NHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCI-----QGSTAVVNLAG  125 (355)
Q Consensus        52 ~IlVtGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~-----~~~d~vi~~a~  125 (355)
                      ||.|.|++|..|+.+++.+.+. ++++.+..-..+..........   -.-+|++.++.+.+.+     .++..|+-..|
T Consensus         1 kI~v~Ga~GrMG~~i~~~i~~~~~~~l~~~~d~~~~~~~~~~~~~---DvvIDFS~p~~~~~~~~~~~~~~~~~ViGTTG   77 (135)
T d1yl7a1           1 RVGVLGAKGKVGATMVRAVAAADDLTLSAELDAGDPLSLLTDGNT---EVVIDFTHPDVVMGNLEFLIDNGIHAVVGTTG   77 (135)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTSEEEEEECTTCCTHHHHTTTC---SEEEECCCTTTHHHHHHHHHHTTCEEEECCCC
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCchhhhccccC---CEEEEcccHHHHHHHHHHHHhcCCCEEEeccc
Confidence            6999999999999999998775 6887765433322222211110   2347888888766554     36788886666


Q ss_pred             C
Q 018503          126 T  126 (355)
Q Consensus       126 ~  126 (355)
                      .
T Consensus        78 ~   78 (135)
T d1yl7a1          78 F   78 (135)
T ss_dssp             C
T ss_pred             c
Confidence            4

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=96.55  E-value=0.00076  Score=51.46  Aligned_cols=73  Identities=12%  Similarity=-0.012  Sum_probs=49.4

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCC-eEEEEecCCchhhccCCCCCCccCCCeeecCCcc---hhhhc--CCCcEEEEC
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQ---WRDCI--QGSTAVVNL  123 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~---~~~~~--~~~d~vi~~  123 (355)
                      ..+|+|.|+ |-+|...++.+...|. +|+++++++.+.......+.   ...++..+.+.   +.++.  .++|+||.+
T Consensus        28 g~~VlI~Ga-G~vGl~~~q~ak~~Ga~~Vi~~d~~~~r~~~a~~lGa---~~~i~~~~~~~~~~v~~~t~g~G~D~vid~  103 (174)
T d1jqba2          28 GSSVVVIGI-GAVGLMGIAGAKLRGAGRIIGVGSRPICVEAAKFYGA---TDILNYKNGHIEDQVMKLTNGKGVDRVIMA  103 (174)
T ss_dssp             TCCEEEECC-SHHHHHHHHHHHTTTCSCEEEECCCHHHHHHHHHHTC---SEEECGGGSCHHHHHHHHTTTSCEEEEEEC
T ss_pred             CCEEEEEcC-CcchhhhhhhhhcccccccccccchhhhHHHHHhhCc---cccccccchhHHHHHHHHhhccCcceEEEc
Confidence            357999985 9999999999998996 79999998876554333221   11234444333   33333  258999999


Q ss_pred             CCC
Q 018503          124 AGT  126 (355)
Q Consensus       124 a~~  126 (355)
                      +|.
T Consensus       104 ~g~  106 (174)
T d1jqba2         104 GGG  106 (174)
T ss_dssp             SSC
T ss_pred             cCC
Confidence            984

>d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Putative shikimate dehydrogenase YdiB
species: Escherichia coli [TaxId: 562]

Probab=96.51  E-value=0.0017  Score=49.84  Aligned_cols=76  Identities=8%  Similarity=0.110  Sum_probs=52.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCC-eEEEEecCCchhhccCCC-------CCCccCCCeeecCCcchhhhcCCCcEE
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRSKAELIFPG-------KKTRFFPGVMIAEEPQWRDCIQGSTAV  120 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~-------~~~~~~~~~d~~~~~~~~~~~~~~d~v  120 (355)
                      ..++|+|+| +|..|++++..|.+.|. +++++.|+.+........       .. ......++.+.+.+.+.+.++|+|
T Consensus        17 ~~k~vlIlG-aGGaarai~~al~~~g~~~i~i~nR~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~dii   94 (182)
T d1vi2a1          17 KGKTMVLLG-AGGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTD-CVVTVTDLADQQAFAEALASADIL   94 (182)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSS-CEEEEEETTCHHHHHHHHHTCSEE
T ss_pred             CCCEEEEEC-CcHHHHHHHHHHhhcCCceEeeeccchHHHHHHHHHHHHHHhhcC-cceEeeecccccchhhhhccccee
Confidence            347999999 58999999999999985 899999987654332110       00 001123455566677777899999


Q ss_pred             EECCCC
Q 018503          121 VNLAGT  126 (355)
Q Consensus       121 i~~a~~  126 (355)
                      |++...
T Consensus        95 IN~Tp~  100 (182)
T d1vi2a1          95 TNGTKV  100 (182)
T ss_dssp             EECSST
T ss_pred             ccccCC
Confidence            999764

>d2csua1 c.2.1.8 (A:1-129) Acetate-CoA ligase alpha chain, AcdA, N-terminal domain {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Acetate-CoA ligase alpha chain, AcdA, N-terminal domain
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=96.48  E-value=0.0074  Score=43.09  Aligned_cols=88  Identities=15%  Similarity=0.175  Sum_probs=59.1

Q ss_pred             CCEEEEEcCC---chHHHHHHHHHHhCC-CeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcCCCcEEEECCC
Q 018503           50 QMTVSVTGAT---GFIGRRLVQRLQADN-HQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG  125 (355)
Q Consensus        50 ~~~IlVtGat---G~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~  125 (355)
                      +++|+|+|||   |..|..+.+.|.+.| ++|+.+....+..   .           ...-..++.++-..+|.++-+..
T Consensus         8 PksIAVVGaS~~~~~~g~~v~~~L~~~~~g~v~pVnP~~~~i---~-----------G~~~y~sl~dlp~~vDlvvi~vp   73 (129)
T d2csua1           8 PKGIAVIGASNDPKKLGYEVFKNLKEYKKGKVYPVNIKEEEV---Q-----------GVKAYKSVKDIPDEIDLAIIVVP   73 (129)
T ss_dssp             CSEEEEETCCSCTTSHHHHHHHHHTTCCSSEEEEECSSCSEE---T-----------TEECBSSTTSCSSCCSEEEECSC
T ss_pred             CCeEEEEccCCCCCCcHHHHHHHHHHcCCCcEEEeccCcccc---C-----------CeEeecchhhcCCCCceEEEecC
Confidence            4689999999   999999999998766 7999886543221   1           11123345555567899987753


Q ss_pred             CCCCCCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEeeee
Q 018503          126 TPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATA  172 (355)
Q Consensus       126 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss~~  172 (355)
                      .                   ..+..+++.|.+  .+++.++.+|+..
T Consensus        74 ~-------------------~~~~~~~~~~~~--~g~~~~vi~s~Gf   99 (129)
T d2csua1          74 K-------------------RFVKDTLIQCGE--KGVKGVVIITAGF   99 (129)
T ss_dssp             H-------------------HHHHHHHHHHHH--HTCCEEEECCCSS
T ss_pred             h-------------------HHhHHHHHHHHH--cCCCEEEEecccc
Confidence            1                   122355666666  5888888887753

>d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Haemophilus influenzae [TaxId: 727]

Probab=96.38  E-value=0.0052  Score=41.36  Aligned_cols=73  Identities=14%  Similarity=0.078  Sum_probs=47.4

Q ss_pred             cCCCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhc-cCCCCCCccCCCeeecCCcchhhhcCCCcEEEECCC
Q 018503           47 KASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAEL-IFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG  125 (355)
Q Consensus        47 ~~~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~  125 (355)
                      +...++|.++|..|--=++|++.|.++||+|.+.++..+.... +...       ++.+.....- +.+.++|.||...+
T Consensus         5 ~~~~~~ihfiGigG~GMs~LA~~L~~~G~~VsGSD~~~~~~~~~L~~~-------Gi~v~~g~~~-~~i~~~d~vV~S~A   76 (96)
T d1p3da1           5 MRRVQQIHFIGIGGAGMSGIAEILLNEGYQISGSDIADGVVTQRLAQA-------GAKIYIGHAE-EHIEGASVVVVSSA   76 (96)
T ss_dssp             CTTCCEEEEETTTSTTHHHHHHHHHHHTCEEEEEESCCSHHHHHHHHT-------TCEEEESCCG-GGGTTCSEEEECTT
T ss_pred             chhCCEEEEEEECHHHHHHHHHHHHhCCCEEEEEeCCCChhhhHHHHC-------CCeEEECCcc-ccCCCCCEEEECCC
Confidence            4445799999854433377899999999999999997654332 2222       1333322222 23468999999988


Q ss_pred             CC
Q 018503          126 TP  127 (355)
Q Consensus       126 ~~  127 (355)
                      .+
T Consensus        77 I~   78 (96)
T d1p3da1          77 IK   78 (96)
T ss_dssp             SC
T ss_pred             cC
Confidence            64

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=96.31  E-value=0.0024  Score=48.03  Aligned_cols=72  Identities=24%  Similarity=0.136  Sum_probs=48.7

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhh---hcCCCcEEEECCC
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRD---CIQGSTAVVNLAG  125 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~---~~~~~d~vi~~a~  125 (355)
                      ..+|+|.|+ |-+|...++.+...|.+|+++++++.+.+.....+.   ...+|..+.+..++   ...+.|.+|.+++
T Consensus        28 g~~VlV~Ga-G~vG~~~~~~ak~~G~~Vi~~~~~~~~~~~a~~~Ga---~~~i~~~~~~~~~~~~~~~~g~~~~i~~~~  102 (166)
T d1llua2          28 GQWVAISGI-GGLGHVAVQYARAMGLHVAAIDIDDAKLELARKLGA---SLTVNARQEDPVEAIQRDIGGAHGVLVTAV  102 (166)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTC---SEEEETTTSCHHHHHHHHHSSEEEEEECCS
T ss_pred             CCEEEEeec-cccHHHHHHHHHHcCCccceecchhhHHHhhhccCc---cccccccchhHHHHHHHhhcCCcccccccc
Confidence            458999885 999999999988899999999999877654443321   12234444443333   3346666666655

>d1y81a1 c.2.1.8 (A:6-121) Hypothetical protein PF0725 {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PF0725
species: Pyrococcus furiosus [TaxId: 2261]

Probab=96.31  E-value=0.014  Score=40.73  Aligned_cols=61  Identities=11%  Similarity=0.152  Sum_probs=43.1

Q ss_pred             CEEEEEcCC---chHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcCCCcEEEECCC
Q 018503           51 MTVSVTGAT---GFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG  125 (355)
Q Consensus        51 ~~IlVtGat---G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~  125 (355)
                      ++|.|+|+|   |..|..+.+.|++.||+|+.+....+.            ..  .+.-..++.++-..+|.++-+..
T Consensus         2 KsIAVvGaS~~~~k~g~~v~~~L~~~g~~V~pVnP~~~~------------i~--G~~~y~sl~~lp~~~D~vvi~vp   65 (116)
T d1y81a1           2 RKIALVGASKNPAKYGNIILKDLLSKGFEVLPVNPNYDE------------IE--GLKCYRSVRELPKDVDVIVFVVP   65 (116)
T ss_dssp             CEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSE------------ET--TEECBSSGGGSCTTCCEEEECSC
T ss_pred             cEEEEEcccCCCCCcHHHHHHHHHHCCCEEEEEcccccc------------cc--CccccccchhccccceEEEEEeC
Confidence            579999988   789999999999999999887543221            11  11223455566667899887753

>d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-2-hydroxyisocaproate dehydrogenase
species: Lactobacillus casei [TaxId: 1582]

Probab=96.26  E-value=0.0029  Score=49.15  Aligned_cols=64  Identities=22%  Similarity=0.215  Sum_probs=47.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcCCCcEEEECCCC
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT  126 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~  126 (355)
                      ..++|.|.| .|.||+.+++.|..-|.+|++.++......          ...++   ..+++++++.+|+|+.+...
T Consensus        44 ~~ktvgIiG-~G~IG~~va~~l~~fg~~v~~~d~~~~~~~----------~~~~~---~~~l~~l~~~~D~v~~~~pl  107 (199)
T d1dxya1          44 GQQTVGVMG-TGHIGQVAIKLFKGFGAKVIAYDPYPMKGD----------HPDFD---YVSLEDLFKQSDVIDLHVPG  107 (199)
T ss_dssp             GGSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCCSSC----------CTTCE---ECCHHHHHHHCSEEEECCCC
T ss_pred             cceeeeeee-cccccccccccccccceeeeccCCccchhh----------hcchh---HHHHHHHHHhcccceeeecc
Confidence            347899999 899999999999999999999998654321          11122   23577778888988766543

>d2d59a1 c.2.1.8 (A:4-142) Hypothetical protein PH1109 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PH1109
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=96.24  E-value=0.0098  Score=43.02  Aligned_cols=62  Identities=11%  Similarity=-0.001  Sum_probs=43.9

Q ss_pred             CCEEEEEcCC---chHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcCCCcEEEECCC
Q 018503           50 QMTVSVTGAT---GFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG  125 (355)
Q Consensus        50 ~~~IlVtGat---G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~  125 (355)
                      .++|+|+|+|   +..|..+++.|.+.||+|+.+.-....   .         .  ...-..++.++-..+|.|+-+..
T Consensus        19 ~ksIAVVGaS~~~~~~g~~v~~~L~~~g~~v~pVnP~~~~---i---------~--G~~~~~sl~dlp~~iD~v~i~vp   83 (139)
T d2d59a1          19 YKKIALVGASPKPERDANIVMKYLLEHGYDVYPVNPKYEE---V---------L--GRKCYPSVLDIPDKIEVVDLFVK   83 (139)
T ss_dssp             CCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSE---E---------T--TEECBSSGGGCSSCCSEEEECSC
T ss_pred             CCeEEEEeecCCCCCchHHHHHHHHHCCCEEEEECCcccc---c---------C--CCcccccccccCccceEEEEEeC
Confidence            4689999998   789999999999999999887543211   1         1  11123455555567899887753

>d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=96.24  E-value=0.0051  Score=47.25  Aligned_cols=64  Identities=14%  Similarity=0.043  Sum_probs=48.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcCCCcEEEECCCC
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT  126 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~  126 (355)
                      ..++|.|.| .|.||+.+++.|..-|.+|++.++......             ......++++++++.+|+|+.++..
T Consensus        43 ~~~~vgiiG-~G~IG~~va~~l~~fg~~v~~~d~~~~~~~-------------~~~~~~~~l~ell~~sDii~i~~pl  106 (188)
T d1sc6a1          43 RGKKLGIIG-YGHIGTQLGILAESLGMYVYFYDIENKLPL-------------GNATQVQHLSDLLNMSDVVSLHVPE  106 (188)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCCCCC-------------TTCEECSCHHHHHHHCSEEEECCCS
T ss_pred             cceEEEEee-cccchhhhhhhcccccceEeeccccccchh-------------hhhhhhhhHHHHHhhccceeecccC
Confidence            347899998 899999999999999999999998643211             0112234677888889998877654

>d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Formate dehydrogenase
species: Pseudomonas sp., strain 101 [TaxId: 306]

Probab=96.17  E-value=0.0045  Score=47.58  Aligned_cols=68  Identities=16%  Similarity=0.128  Sum_probs=49.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcCCCcEEEECCCC
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT  126 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~  126 (355)
                      ..++|.|.| .|.||+.+++.|..-|.+|.+.++.........         ...+....++.++++.+|+|+.+...
T Consensus        43 ~~~~vgiiG-~G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~---------~~~~~~~~~l~~~l~~sD~v~~~~pl  110 (188)
T d2naca1          43 EAMHVGTVA-AGRIGLAVLRRLAPFDVHLHYTDRHRLPESVEK---------ELNLTWHATREDMYPVCDVVTLNCPL  110 (188)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHGGGTCEEEEECSSCCCHHHHH---------HHTCEECSSHHHHGGGCSEEEECSCC
T ss_pred             cccceeecc-ccccchhhhhhhhccCceEEEEeeccccccccc---------cccccccCCHHHHHHhccchhhcccc
Confidence            347899999 899999999999999999999998654322111         11233456677778888887666543

>d1a9xa3 c.30.1.1 (A:1-127) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=96.15  E-value=0.0039  Score=44.00  Aligned_cols=75  Identities=13%  Similarity=0.080  Sum_probs=51.8

Q ss_pred             CCCCEEEEEcC----------CchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcC--
Q 018503           48 ASQMTVSVTGA----------TGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ--  115 (355)
Q Consensus        48 ~~~~~IlVtGa----------tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--  115 (355)
                      ...+||||+|+          --+.+.+.++.|.+.|++++.+..++....--.....   ...++-...+.+.++++  
T Consensus         5 ~~~kkvlilGsGp~~IGq~~EfDy~~~~a~~alke~g~~~iliN~NP~TVstd~d~aD---~lYfePlt~e~v~~Ii~~E   81 (127)
T d1a9xa3           5 TDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVINVNSNPATIMTDPEMAD---ATYIEPIHWEVVRKIIEKE   81 (127)
T ss_dssp             SSCCEEEEECCCSCBTTBCTHHHHHHHHHHHHHHHHTCEEEEECSCTTCGGGCGGGSS---EEECSCCCHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCcCcccccchhHHHHHHHHHHHHHcCCeEEEecCchHhhhcChhhcc---eeeeecCCHHHHHHHHHHh
Confidence            34579999997          3478999999999999999999988865322111100   11234446667777774  


Q ss_pred             CCcEEEECCC
Q 018503          116 GSTAVVNLAG  125 (355)
Q Consensus       116 ~~d~vi~~a~  125 (355)
                      ++|.|+-..|
T Consensus        82 ~pd~il~~~G   91 (127)
T d1a9xa3          82 RPDAVLPTMG   91 (127)
T ss_dssp             CCSEEECSSS
T ss_pred             CcCCeEEEee
Confidence            7999986655

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=96.14  E-value=0.01  Score=44.91  Aligned_cols=73  Identities=11%  Similarity=0.090  Sum_probs=50.5

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCC-CeEEEEecCCchhhccCCCCCCccCCCeeecCCcc----hhhhc--CCCcEEEE
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADN-HQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQ----WRDCI--QGSTAVVN  122 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~----~~~~~--~~~d~vi~  122 (355)
                      ..+|+|+| .|-+|...++.+...| .+|+++++++++.+.-...+.   ...++..+.+.    +.+..  .++|++|.
T Consensus        30 g~tVlI~G-~GgvGl~ai~~ak~~G~~~Vi~vd~~~~kl~~Ak~~GA---~~~in~~~~~~~~~~~~~~~~g~G~d~vi~  105 (176)
T d1d1ta2          30 GSTCVVFG-LGGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAMAVGA---TECISPKDSTKPISEVLSEMTGNNVGYTFE  105 (176)
T ss_dssp             TCEEEEEC-CSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHHTC---SEEECGGGCSSCHHHHHHHHHTSCCCEEEE
T ss_pred             CCEEEEEC-CCchhHHHHHHHHHcCCceEEEecCcHHHHHHHHhcCC---cEEECccccchHHHHHHHHhccccceEEEE
Confidence            34799998 5999999999999998 589999999987654433221   12234344332    22222  47999999


Q ss_pred             CCCC
Q 018503          123 LAGT  126 (355)
Q Consensus       123 ~a~~  126 (355)
                      +.+.
T Consensus       106 ~~g~  109 (176)
T d1d1ta2         106 VIGH  109 (176)
T ss_dssp             CSCC
T ss_pred             eCCc
Confidence            9874

>d2czca2 c.2.1.3 (A:1-139,A:302-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=96.13  E-value=0.0085  Score=45.12  Aligned_cols=77  Identities=13%  Similarity=0.100  Sum_probs=45.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhC-CCeEEEEecCC-chhh-ccCCCC-CC-c-cCCC------eeecCCcchhhhcCC
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQAD-NHQVRVLTRSR-SKAE-LIFPGK-KT-R-FFPG------VMIAEEPQWRDCIQG  116 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~-g~~V~~~~r~~-~~~~-~~~~~~-~~-~-~~~~------~d~~~~~~~~~~~~~  116 (355)
                      |++||.|-| .|.||+.+++.|.++ +.+|+++.... .... .+.... .. . ....      ..+.....+..+..+
T Consensus         1 M~irIaING-fGRIGR~v~Ral~~~~dieiVaINd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (172)
T d2czca2           1 MKVKVGVNG-YGTIGKRVAYAVTKQDDMELIGITKTKPDFEAYRAKELGIPVYAASEEFIPRFEKEGFEVAGTLNDLLEK   79 (172)
T ss_dssp             CCEEEEEEC-CSHHHHHHHHHHHTCTTEEEEEEEESSCSHHHHHHHHTTCCEEESSGGGHHHHHHHTCCCSCBHHHHHTT
T ss_pred             CcEEEEEEC-CCHHHHHHHHHHHhCCCceEEEEecCCChHHHHHhhhcCceeecccccceeeecccCccccchhhhhhcc
Confidence            457999999 799999999999886 47887776432 2211 111100 00 0 0000      001122355566678


Q ss_pred             CcEEEECCCC
Q 018503          117 STAVVNLAGT  126 (355)
Q Consensus       117 ~d~vi~~a~~  126 (355)
                      +|+|+-|.|.
T Consensus        80 vDvViEcTG~   89 (172)
T d2czca2          80 VDIIVDATPG   89 (172)
T ss_dssp             CSEEEECCST
T ss_pred             CCEEEECCCC
Confidence            9999999985

>d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.11  E-value=0.0043  Score=45.98  Aligned_cols=68  Identities=18%  Similarity=0.116  Sum_probs=52.0

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcCCCcEEEECCCC
Q 018503           48 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT  126 (355)
Q Consensus        48 ~~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~  126 (355)
                      ...+++.|+| .|.+|+.+++.|...|.+|++....+-....-.          .|-.....+++++...|++|-+.|.
T Consensus        22 l~Gk~v~V~G-yG~iG~g~A~~~rg~G~~V~v~e~dp~~al~A~----------~dG~~v~~~~~a~~~adivvtaTGn   89 (163)
T d1li4a1          22 IAGKVAVVAG-YGDVGKGCAQALRGFGARVIITEIDPINALQAA----------MEGYEVTTMDEACQEGNIFVTTTGC   89 (163)
T ss_dssp             CTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH----------HTTCEECCHHHHTTTCSEEEECSSC
T ss_pred             ecCCEEEEec-cccccHHHHHHHHhCCCeeEeeecccchhHHhh----------cCceEeeehhhhhhhccEEEecCCC
Confidence            3567899999 999999999999999999999999875432211          1222333567788889999998875

>d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: L-alanine dehydrogenase
species: Phormidium lapideum [TaxId: 32060]

Probab=96.10  E-value=0.0027  Score=47.25  Aligned_cols=75  Identities=9%  Similarity=0.109  Sum_probs=58.3

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcCCCcEEEECCCCC
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTP  127 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~~  127 (355)
                      +-+|+|+| .|-.|..-++.....|.+|++++.+.+..+.+.....  .....-..+.+.+.+.++++|+||.++-.+
T Consensus        32 pa~V~ViG-aGvaG~~A~~~A~~lGA~V~~~D~~~~~l~~l~~~~~--~~~~~~~~~~~~l~~~~~~aDivI~aalip  106 (168)
T d1pjca1          32 PGKVVILG-GGVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFG--SRVELLYSNSAEIETAVAEADLLIGAVLVP  106 (168)
T ss_dssp             CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHG--GGSEEEECCHHHHHHHHHTCSEEEECCCCT
T ss_pred             CcEEEEEC-CChHHHHHHHHHhhCCCEEEEEeCcHHHHHHHHHhhc--ccceeehhhhhhHHHhhccCcEEEEeeecC
Confidence            35899999 6999999999999999999999999887655433210  012233446678888999999999999765

>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.04  E-value=0.0017  Score=50.04  Aligned_cols=72  Identities=18%  Similarity=0.069  Sum_probs=46.3

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhCCCe-EEEEecCCchhhccCC-CCCCccCCCeeecCCcch---hhhc-CCCcEEEECC
Q 018503           51 MTVSVTGATGFIGRRLVQRLQADNHQ-VRVLTRSRSKAELIFP-GKKTRFFPGVMIAEEPQW---RDCI-QGSTAVVNLA  124 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~g~~-V~~~~r~~~~~~~~~~-~~~~~~~~~~d~~~~~~~---~~~~-~~~d~vi~~a  124 (355)
                      .+|||+||+|-+|+..++.....|.+ |++++++.++...+.. ...   ...+|..+++..   .++. +++|+|+.+.
T Consensus        32 etVLI~gaaGgVG~~aiQlak~~Ga~~vi~~~~~~e~~~~l~~~~ga---d~vi~~~~~~~~~~~~~~~~~GvDvv~D~v  108 (187)
T d1vj1a2          32 QTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQEKCLFLTSELGF---DAAVNYKTGNVAEQLREACPGGVDVYFDNV  108 (187)
T ss_dssp             CEEEESSTTSTTGGGHHHHHHHTTCSEEEEEESSHHHHHHHHHHSCC---SEEEETTSSCHHHHHHHHCTTCEEEEEESS
T ss_pred             CEEEEECCCchhhHHHHHHHHHcCCcceecccchHHHHhhhhhcccc---eEEeeccchhHHHHHHHHhccCceEEEecC
Confidence            57999999999999999999889975 5555666555443321 111   222444443322   2222 3799999998


Q ss_pred             C
Q 018503          125 G  125 (355)
Q Consensus       125 ~  125 (355)
                      |
T Consensus       109 G  109 (187)
T d1vj1a2         109 G  109 (187)
T ss_dssp             C
T ss_pred             C
Confidence            6

>d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=95.97  E-value=0.0067  Score=42.83  Aligned_cols=36  Identities=19%  Similarity=0.301  Sum_probs=32.5

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCch
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSK   86 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~   86 (355)
                      .++|+|.| .|++|-.++..|.+.|.+|+.+.+++.-
T Consensus        30 ~~~vvIIG-gG~iG~E~A~~l~~~g~~Vtli~~~~~~   65 (121)
T d1d7ya2          30 QSRLLIVG-GGVIGLELAATARTAGVHVSLVETQPRL   65 (121)
T ss_dssp             TCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSSST
T ss_pred             CCeEEEEC-cchhHHHHHHHhhcccceEEEEeecccc
Confidence            46899999 6999999999999999999999998753

>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Rck domain from putative potassium channel Kch
species: Escherichia coli [TaxId: 562]

Probab=95.97  E-value=0.0065  Score=44.88  Aligned_cols=72  Identities=10%  Similarity=0.061  Sum_probs=51.7

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhc----cCCCCCCccCCCeeecCCcchhhhc-CCCcEEEECCC
Q 018503           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAEL----IFPGKKTRFFPGVMIAEEPQWRDCI-QGSTAVVNLAG  125 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~----~~~~~~~~~~~~~d~~~~~~~~~~~-~~~d~vi~~a~  125 (355)
                      .+|+|+| .|-+|+.+++.|.+.|++|++++.+++....    ......  .....|..+++.+.++- +++|+||-+..
T Consensus         4 nHiII~G-~g~~g~~l~~~L~~~~~~v~vId~d~~~~~~~~~~~~~~~~--~vi~Gd~~d~~~L~~a~i~~a~~vi~~~~   80 (153)
T d1id1a_           4 DHFIVCG-HSILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGDNA--DVIPGDSNDSSVLKKAGIDRCRAILALSD   80 (153)
T ss_dssp             SCEEEEC-CSHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHCTTC--EEEESCTTSHHHHHHHTTTTCSEEEECSS
T ss_pred             CEEEEEC-CCHHHHHHHHHHHHcCCCEEEEeccchhHHHHHHHhhcCCc--EEEEccCcchHHHHHhccccCCEEEEccc
Confidence            3699999 5999999999999999999999998754221    111110  12345777888776654 57899998864

>d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=95.96  E-value=0.0072  Score=42.34  Aligned_cols=35  Identities=23%  Similarity=0.339  Sum_probs=32.0

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCc
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRS   85 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~   85 (355)
                      +++|+|+| .|++|-.++..|.+.|.+|+++.|.+.
T Consensus        22 p~~v~IiG-gG~ig~E~A~~l~~~G~~Vtlve~~~~   56 (117)
T d1ebda2          22 PKSLVVIG-GGYIGIELGTAYANFGTKVTILEGAGE   56 (117)
T ss_dssp             CSEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             CCeEEEEC-CCccceeeeeeecccccEEEEEEecce
Confidence            36899999 699999999999999999999998764

>d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-glycerate dehydrogenase
species: Hyphomicrobium methylovorum [TaxId: 84]

Probab=95.92  E-value=0.0053  Score=47.21  Aligned_cols=68  Identities=16%  Similarity=0.118  Sum_probs=48.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcCCCcEEEECCCC
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT  126 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~  126 (355)
                      ..+++.|+| .|.||+.+++.+..-|.+|.+.++..........         ......++++++++.+|+|+.+...
T Consensus        46 ~g~tvgIiG-~G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~~---------~~~~~~~~l~~ll~~sD~v~l~~pl  113 (191)
T d1gdha1          46 DNKTLGIYG-FGSIGQALAKRAQGFDMDIDYFDTHRASSSDEAS---------YQATFHDSLDSLLSVSQFFSLNAPS  113 (191)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECSSCCCHHHHHH---------HTCEECSSHHHHHHHCSEEEECCCC
T ss_pred             cccceEEee-cccchHHHHHHHHhhccccccccccccccchhhc---------ccccccCCHHHHHhhCCeEEecCCC
Confidence            357899999 8999999999999999999999886543221111         1122345677788888887766543

>d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=95.84  E-value=0.007  Score=42.79  Aligned_cols=36  Identities=17%  Similarity=0.218  Sum_probs=32.5

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCch
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSK   86 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~   86 (355)
                      +++++|+| +|++|-.++..|.+.|.+|+.+.|.+.-
T Consensus        23 p~~~vIiG-~G~ig~E~A~~l~~lG~~Vtii~~~~~~   58 (122)
T d1v59a2          23 PKRLTIIG-GGIIGLEMGSVYSRLGSKVTVVEFQPQI   58 (122)
T ss_dssp             CSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred             CCeEEEEC-CCchHHHHHHHHHhhCcceeEEEecccc
Confidence            36899999 6999999999999999999999997643

>d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Plasmodium falciparum [TaxId: 5833]

Probab=95.84  E-value=0.007  Score=42.43  Aligned_cols=35  Identities=14%  Similarity=0.391  Sum_probs=32.0

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCc
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRS   85 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~   85 (355)
                      +++|+|.| .|++|-.++..|.+.|.+|+.+.|.+.
T Consensus        22 p~~v~IiG-gG~iG~E~A~~l~~~g~~Vtlv~~~~~   56 (117)
T d1onfa2          22 SKKIGIVG-SGYIAVELINVIKRLGIDSYIFARGNR   56 (117)
T ss_dssp             CSEEEEEC-CSHHHHHHHHHHHTTTCEEEEECSSSS
T ss_pred             CCEEEEEC-CchHHHHHHHHHHhccccceeeehhcc
Confidence            47899999 699999999999999999999999764

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=95.84  E-value=0.0033  Score=47.70  Aligned_cols=73  Identities=12%  Similarity=0.071  Sum_probs=46.2

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCCe-EEEEecCCchhhccCCCCCCccCCCeeecCCcchh---hhc-CCCcEEEECC
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNHQ-VRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWR---DCI-QGSTAVVNLA  124 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~~-V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~---~~~-~~~d~vi~~a  124 (355)
                      ..+|+|+|+ |.+|...++.+...|.+ |+++++++.+.......+.   ..-+|..+.+..+   ++. .++|+||.+.
T Consensus        29 g~~VlI~G~-G~iG~~~~~~ak~~g~~~v~~~~~~~~k~~~a~~~Ga---~~~i~~~~~~~~~~i~~~t~gg~D~vid~~  104 (174)
T d1f8fa2          29 ASSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVESRLELAKQLGA---THVINSKTQDPVAAIKEITDGGVNFALEST  104 (174)
T ss_dssp             TCEEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHHTC---SEEEETTTSCHHHHHHHHTTSCEEEEEECS
T ss_pred             CCEEEEeCC-CHHHhhhhhcccccccceeeeeccHHHHHHHHHHcCC---eEEEeCCCcCHHHHHHHHcCCCCcEEEEcC
Confidence            458999996 99999999998888875 4556666655443332211   1123444443333   222 2589999998


Q ss_pred             CC
Q 018503          125 GT  126 (355)
Q Consensus       125 ~~  126 (355)
                      |.
T Consensus       105 G~  106 (174)
T d1f8fa2         105 GS  106 (174)
T ss_dssp             CC
T ss_pred             Cc
Confidence            74

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=95.83  E-value=0.0096  Score=45.04  Aligned_cols=73  Identities=14%  Similarity=0.097  Sum_probs=49.5

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCC-CeEEEEecCCchhhccCCCCCCccCCCeeecCCc-chhhhc-----CCCcEEEE
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADN-HQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEP-QWRDCI-----QGSTAVVN  122 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~-~~~~~~-----~~~d~vi~  122 (355)
                      ..+|+|.|+ |.+|...+.++...| .+|+++++++++.........   ...++..+.+ .+.+..     .++|++|.
T Consensus        29 GdtVlV~Ga-GG~G~~~~~~~~~~g~~~Vi~~~~~~~k~~~a~~~Ga---~~~i~~~~~~~~~~~~~~~~~~~G~D~vid  104 (176)
T d2jhfa2          29 GSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGA---TECVNPQDYKKPIQEVLTEMSNGGVDFSFE  104 (176)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTC---SEEECGGGCSSCHHHHHHHHTTSCBSEEEE
T ss_pred             CCEEEEECC-CCcHHHHHHHHHHcCCceEEeecCcHHHHHHHHHhCC---eeEEecCCchhHHHHHHHHHhcCCCCEEEe
Confidence            458999998 568999999999987 589999999887665544322   1123333322 232222     37999999


Q ss_pred             CCCC
Q 018503          123 LAGT  126 (355)
Q Consensus       123 ~a~~  126 (355)
                      +.|.
T Consensus       105 ~~G~  108 (176)
T d2jhfa2         105 VIGR  108 (176)
T ss_dssp             CSCC
T ss_pred             cCCc
Confidence            9874

>d2dt5a2 c.2.1.12 (A:78-203) Transcriptional repressor Rex, C-terminal domain {Thermus aquaticus [TaxId: 271]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Transcriptional repressor Rex, C-terminal domain
domain: Transcriptional repressor Rex, C-terminal domain
species: Thermus aquaticus [TaxId: 271]

Probab=95.82  E-value=0.013  Score=41.59  Aligned_cols=90  Identities=12%  Similarity=0.130  Sum_probs=58.4

Q ss_pred             EEEEEcCCchHHHHHHHHHHh-CCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcC-CCcEEEECCCCCCC
Q 018503           52 TVSVTGATGFIGRRLVQRLQA-DNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ-GSTAVVNLAGTPIG  129 (355)
Q Consensus        52 ~IlVtGatG~iG~~l~~~L~~-~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-~~d~vi~~a~~~~~  129 (355)
                      +|+|.| +|.+|+.|++.+.. .+|+++++..+.......       ...++.+...+.+.+..+ .++.++-+..    
T Consensus         5 ~v~I~G-aG~~G~~l~~~l~~~~~~~iv~fiDdd~~k~G~-------~I~Gi~V~~~~~l~~~~~~~i~iai~~i~----   72 (126)
T d2dt5a2           5 GLCIVG-MGRLGSALADYPGFGESFELRGFFDVDPEKVGR-------PVRGGVIEHVDLLPQRVPGRIEIALLTVP----   72 (126)
T ss_dssp             EEEEEC-CSHHHHHHHHCSCCCSSEEEEEEEESCTTTTTC-------EETTEEEEEGGGHHHHSTTTCCEEEECSC----
T ss_pred             eEEEEc-CCHHHHHHHHhHhhcCCcEEEEEEeCchHhcCC-------EECCEEEecHHHHHHHHhhcccEEEEeCC----
Confidence            799999 79999999998764 478988876654332111       134466677788877775 4666665542    


Q ss_pred             CCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEee
Q 018503          130 TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSA  170 (355)
Q Consensus       130 ~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~Ss  170 (355)
                          .           ...+.+++.|.+  .+++.+.-++.
T Consensus        73 ----~-----------~~~~~I~d~l~~--~gIk~I~~f~~   96 (126)
T d2dt5a2          73 ----R-----------EAAQKAADLLVA--AGIKGILNFAP   96 (126)
T ss_dssp             ----H-----------HHHHHHHHHHHH--HTCCEEEECSS
T ss_pred             ----H-----------HHHHHHHHHHHH--cCCCEEeecCc
Confidence                1           122356677777  57876655443

>d1obba1 c.2.1.5 (A:2-172) Alpha-glucosidase AglA {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Alpha-glucosidase AglA
species: Thermotoga maritima [TaxId: 2336]

Probab=95.81  E-value=0.01  Score=44.72  Aligned_cols=77  Identities=17%  Similarity=0.168  Sum_probs=50.1

Q ss_pred             CCEEEEEcCCchHHHH--HHHHHHhC----CCeEEEEecCCchhhccCCCC---CCccCCCeeecCCcchhhhcCCCcEE
Q 018503           50 QMTVSVTGATGFIGRR--LVQRLQAD----NHQVRVLTRSRSKAELIFPGK---KTRFFPGVMIAEEPQWRDCIQGSTAV  120 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~--l~~~L~~~----g~~V~~~~r~~~~~~~~~~~~---~~~~~~~~d~~~~~~~~~~~~~~d~v  120 (355)
                      .|||.|+|| |.+|..  ++..|+..    +.++..++.++++.+......   .........+....+..++++++|+|
T Consensus         2 ~mKI~iIGa-Gsvg~t~~~~~~l~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~i~~~td~~eaL~dad~V   80 (171)
T d1obba1           2 SVKIGIIGA-GSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDAILTIAKKYVEEVGADLKFEKTMNLDDVIIDADFV   80 (171)
T ss_dssp             CCEEEEETT-TCHHHHHHHHHHHHTCGGGTTCEEEEECSCHHHHHHHHHHHHHHHHHTTCCCEEEEESCHHHHHTTCSEE
T ss_pred             CcEEEEECC-CHHHhHHHHHHHHHhccccCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCCeEEEEeCChhhcccCCCeE
Confidence            379999995 888865  44445543    469999999877543211000   00002234555666788889999999


Q ss_pred             EECCCCC
Q 018503          121 VNLAGTP  127 (355)
Q Consensus       121 i~~a~~~  127 (355)
                      +..++..
T Consensus        81 v~~~~~g   87 (171)
T d1obba1          81 INTAMVG   87 (171)
T ss_dssp             EECCCTT
T ss_pred             eeecccc
Confidence            9998753

>d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=95.80  E-value=0.0012  Score=50.51  Aligned_cols=76  Identities=16%  Similarity=0.147  Sum_probs=49.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCcc-CCCeeecCCcchhhhcCCCcEEEECCCC
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRF-FPGVMIAEEPQWRDCIQGSTAVVNLAGT  126 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~d~~~~~~~~~~~~~~d~vi~~a~~  126 (355)
                      ..++|+|+| +|..+++++..|.+.| +|+++.|+.++...+........ .......+.+.+.....+.|.+|++...
T Consensus        17 ~~k~vlIlG-aGG~arai~~aL~~~~-~i~I~nR~~~ka~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~dliIn~tp~   93 (177)
T d1nvta1          17 KDKNIVIYG-AGGAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEKLNKKFGEEVKFSGLDVDLDGVDIIINATPI   93 (177)
T ss_dssp             CSCEEEEEC-CSHHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHHHHTCCHHHHEEEECTTCCCTTCCEEEECSCT
T ss_pred             CCCEEEEEC-CcHHHHHHHHHHcccc-ceeeehhhhhHHHHHHHHHHHhhchhhhhhhhhhhhhhccchhhhhccCCcc
Confidence            457999999 6889999999997777 99999999887655432100000 0001112334445556678999999764

>d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=95.79  E-value=0.0078  Score=42.11  Aligned_cols=34  Identities=21%  Similarity=0.325  Sum_probs=31.5

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCc
Q 018503           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRS   85 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~   85 (355)
                      ++|+|+| .|++|-.++..|.+.|.+|+.+.|.+.
T Consensus        22 ~~vvIiG-gG~ig~E~A~~l~~~G~~Vtlve~~~~   55 (116)
T d1gesa2          22 ERVAVVG-AGYIGVELGGVINGLGAKTHLFEMFDA   55 (116)
T ss_dssp             SEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             CEEEEEC-CChhhHHHHHHhhccccEEEEEeecch
Confidence            6899999 699999999999999999999999764

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=95.73  E-value=0.0087  Score=45.24  Aligned_cols=73  Identities=16%  Similarity=0.098  Sum_probs=50.3

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCC-eEEEEecCCchhhccCCCCCCccCCCeeecCCcc-hhhhc-----CCCcEEEE
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQ-WRDCI-----QGSTAVVN  122 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~-~~~~~-----~~~d~vi~  122 (355)
                      ..+|+|.|+ |-+|...++.+...|. +|+++++++++.+.....+.   ...+|..+.+. +.+..     .++|+||.
T Consensus        28 G~~VlV~Ga-GgvGl~a~~~ak~~G~~~Vi~~d~~~~kl~~a~~lGa---~~~i~~~~~d~~~~~~~~~~~~~G~d~vid  103 (174)
T d1p0fa2          28 GSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGA---TECLNPKDYDKPIYEVICEKTNGGVDYAVE  103 (174)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHTTC---SEEECGGGCSSCHHHHHHHHTTSCBSEEEE
T ss_pred             CCEEEEECC-CchhHHHHHHHHHcCCceeeccCChHHHHHHHHHcCC---cEEEcCCCchhHHHHHHHHhcCCCCcEEEE
Confidence            458999985 9999999999999985 79999998877654443322   22234443332 22222     37899999


Q ss_pred             CCCC
Q 018503          123 LAGT  126 (355)
Q Consensus       123 ~a~~  126 (355)
                      +.+.
T Consensus       104 ~~g~  107 (174)
T d1p0fa2         104 CAGR  107 (174)
T ss_dssp             CSCC
T ss_pred             cCCC
Confidence            9874

>d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Azotobacter vinelandii [TaxId: 354]

Probab=95.72  E-value=0.0093  Score=41.93  Aligned_cols=35  Identities=26%  Similarity=0.260  Sum_probs=32.2

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCc
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRS   85 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~   85 (355)
                      +++++|+| +|+||-.++..|.+.|.+|+++.|+..
T Consensus        22 p~~i~IiG-~G~ig~E~A~~l~~~G~~Vtiv~~~~~   56 (119)
T d3lada2          22 PGKLGVIG-AGVIGLELGSVWARLGAEVTVLEAMDK   56 (119)
T ss_dssp             CSEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             CCeEEEEC-CChHHHHHHHHHHHcCCceEEEEeecc
Confidence            46899999 699999999999999999999999764

>d1nvmb1 c.2.1.3 (B:1-131,B:287-312) Acetaldehyde dehydrogenase (acylating) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Acetaldehyde dehydrogenase (acylating)
species: Pseudomonas sp. [TaxId: 306]

Probab=95.71  E-value=0.0022  Score=47.68  Aligned_cols=71  Identities=13%  Similarity=0.102  Sum_probs=38.7

Q ss_pred             CCCEEEEEcCCchHHHHH-HHHHHhC-CCeEEEE-ecCCchhh-ccCCCCCCccCCCeeecCCcchhhh--cCCCcEEEE
Q 018503           49 SQMTVSVTGATGFIGRRL-VQRLQAD-NHQVRVL-TRSRSKAE-LIFPGKKTRFFPGVMIAEEPQWRDC--IQGSTAVVN  122 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l-~~~L~~~-g~~V~~~-~r~~~~~~-~~~~~~~~~~~~~~d~~~~~~~~~~--~~~~d~vi~  122 (355)
                      .++||.|+| +|.+|+.+ .+.|... ..+++++ +|++.... ......    .......+.+.+.+.  +.++|+||.
T Consensus         3 kkirvaIIG-aG~ig~~~~~~~l~~~~~~el~avas~~~~~~~~~~a~~~----~i~~~~~~~d~l~~~~~~~~iDiVf~   77 (157)
T d1nvmb1           3 QKLKVAIIG-SGNIGTDLMIKVLRNAKYLEMGAMVGIDAASDGLARAQRM----GVTTTYAGVEGLIKLPEFADIDFVFD   77 (157)
T ss_dssp             SCEEEEEEC-CSHHHHHHHHHHHHHCSSEEEEEEECSCTTCHHHHHHHHT----TCCEESSHHHHHHHSGGGGGEEEEEE
T ss_pred             CCcEEEEEc-CcHHHHHHHHHHHhhCCcceEEEEEecchhccchhhhhhc----CCcccccceeeeeecccccccCEEEE
Confidence            457999999 99999865 5555444 4577776 45544221 111110    011111123334332  347899998


Q ss_pred             CC
Q 018503          123 LA  124 (355)
Q Consensus       123 ~a  124 (355)
                      +.
T Consensus        78 AT   79 (157)
T d1nvmb1          78 AT   79 (157)
T ss_dssp             CS
T ss_pred             cC
Confidence            75

>d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=95.67  E-value=0.011  Score=41.82  Aligned_cols=35  Identities=23%  Similarity=0.367  Sum_probs=31.7

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCc
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRS   85 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~   85 (355)
                      .++|+|.| .|++|-.++..|.+.|.+|+.+.+.+.
T Consensus        30 ~k~vvViG-gG~iG~E~A~~l~~~g~~Vtlie~~~~   64 (123)
T d1nhpa2          30 VNNVVVIG-SGYIGIEAAEAFAKAGKKVTVIDILDR   64 (123)
T ss_dssp             CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             CCEEEEEC-ChHHHHHHHHHhhccceEEEEEEecCc
Confidence            46899998 699999999999999999999988764

>d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Rhodotorula gracilis [TaxId: 5286]

Probab=95.64  E-value=0.0088  Score=48.01  Aligned_cols=35  Identities=34%  Similarity=0.397  Sum_probs=31.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCC
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSR   84 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~   84 (355)
                      +.+||+|+| +|..|-..+..|.++|++|+++.|..
T Consensus         5 ~~~kVvVIG-aGiaGl~~A~~L~~~G~~V~vier~~   39 (268)
T d1c0pa1           5 SQKRVVVLG-SGVIGLSSALILARKGYSVHILARDL   39 (268)
T ss_dssp             CSCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred             CCCcEEEEC-ccHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            346899999 69999999999999999999999864

>d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Phenylalanine dehydrogenase
species: Rhodococcus sp., M4 [TaxId: 1831]

Probab=95.61  E-value=0.011  Score=45.58  Aligned_cols=67  Identities=16%  Similarity=0.133  Sum_probs=48.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhc-CCCcEEEECCCC
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCI-QGSTAVVNLAGT  126 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~-~~~d~vi~~a~~  126 (355)
                      ..++|+|-| .|.+|+++++.|.+.|.+|++.+.+..........       ..+..+.++   ++ .++|+++-||..
T Consensus        26 ~gk~v~IqG-~G~VG~~~A~~L~~~Gakvvv~d~d~~~~~~~~~~-------g~~~~~~~~---~~~~~~DI~iPcA~~   93 (201)
T d1c1da1          26 DGLTVLVQG-LGAVGGSLASLAAEAGAQLLVADTDTERVAHAVAL-------GHTAVALED---VLSTPCDVFAPCAMG   93 (201)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHT-------TCEECCGGG---GGGCCCSEEEECSCS
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEecchHHHHHHHHhh-------cccccCccc---cccccceeeeccccc
Confidence            457999998 89999999999999999999988876554432221       133444433   34 379999988753

>d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=95.56  E-value=0.01  Score=45.22  Aligned_cols=66  Identities=24%  Similarity=0.160  Sum_probs=47.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcCCCcEEEECCCC
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT  126 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~  126 (355)
                      ..+++.|+| .|.||+.+++.+..-|.+|++.++..........        .+   ...+++++++++|+|+.+...
T Consensus        43 ~~k~vgiiG-~G~IG~~va~~~~~fg~~v~~~d~~~~~~~~~~~--------~~---~~~~l~ell~~sDiv~~~~Pl  108 (184)
T d1ygya1          43 FGKTVGVVG-LGRIGQLVAQRIAAFGAYVVAYDPYVSPARAAQL--------GI---ELLSLDDLLARADFISVHLPK  108 (184)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECTTSCHHHHHHH--------TC---EECCHHHHHHHCSEEEECCCC
T ss_pred             cceeeeecc-ccchhHHHHHHhhhccceEEeecCCCChhHHhhc--------Cc---eeccHHHHHhhCCEEEEcCCC
Confidence            347899988 8999999999999999999999987655332111        01   233566777888887766543

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=95.53  E-value=0.016  Score=43.69  Aligned_cols=73  Identities=18%  Similarity=0.112  Sum_probs=48.5

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCC-eEEEEecCCchhhccCCCCCCccCCCeeecCCc-chhhhc-----CCCcEEEE
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEP-QWRDCI-----QGSTAVVN  122 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~-~~~~~~-----~~~d~vi~  122 (355)
                      ..+|+|+| +|-+|...++.+...|. .|++.++++.+.......+.   ...++..+.+ ......     .++|+||.
T Consensus        29 G~~VlV~G-~G~iGl~a~~~ak~~Ga~~Vi~~d~~~~r~~~a~~~Ga---~~~i~~~~~~~~~~~~~~~~~~~G~d~vie  104 (174)
T d1e3ia2          29 GSTCAVFG-LGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALGA---TDCLNPRELDKPVQDVITELTAGGVDYSLD  104 (174)
T ss_dssp             TCEEEEEC-CSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTC---SEEECGGGCSSCHHHHHHHHHTSCBSEEEE
T ss_pred             CCEEEEEC-CChHHHHHHHHHHHhCCceeeeeccchHHHHHHHHhCC---CcccCCccchhhhhhhHhhhhcCCCcEEEE
Confidence            35899998 69999999999999996 68888888876544333221   1112322222 222222     47999999


Q ss_pred             CCCC
Q 018503          123 LAGT  126 (355)
Q Consensus       123 ~a~~  126 (355)
                      +.|.
T Consensus       105 ~~G~  108 (174)
T d1e3ia2         105 CAGT  108 (174)
T ss_dssp             SSCC
T ss_pred             eccc
Confidence            9985

>d1edza1 c.2.1.7 (A:149-319) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=95.52  E-value=0.015  Score=43.51  Aligned_cols=79  Identities=15%  Similarity=0.061  Sum_probs=51.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeee--cCCcchhhhcCCCcEEEECCCC
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMI--AEEPQWRDCIQGSTAVVNLAGT  126 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~--~~~~~~~~~~~~~d~vi~~a~~  126 (355)
                      .+++|.|+|-|.-+|+.++..|+++|..|+.+......................++  ...+.+++....+|+||..+|.
T Consensus        28 ~GK~vvVIGrS~iVG~Pla~lL~~~gaTVt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lk~~~~~aDIvIsavG~  107 (171)
T d1edza1          28 YGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQKFTRGESLKLNKHHVEDLGEYSEDLLKKCSLDSDVVITGVPS  107 (171)
T ss_dssp             TTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEEEESCCCSSCCCCEEEEEEECCHHHHHHHHHHCSEEEECCCC
T ss_pred             CCCEEEEECCccccHHHHHHHHHHCCCEEEEeccccccccccccceeeeeeccccccccchhHHhhccccCCEEEEccCC
Confidence            46899999999999999999999999999877755332111111100000001112  2345577777789999999886


Q ss_pred             C
Q 018503          127 P  127 (355)
Q Consensus       127 ~  127 (355)
                      +
T Consensus       108 p  108 (171)
T d1edza1         108 E  108 (171)
T ss_dssp             T
T ss_pred             C
Confidence            4

>d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.51  E-value=0.011  Score=41.90  Aligned_cols=35  Identities=17%  Similarity=0.296  Sum_probs=32.0

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCc
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRS   85 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~   85 (355)
                      +++++|+| .|++|-.++..|.+.|.+|+.+.|++.
T Consensus        22 pk~vvIvG-gG~iG~E~A~~l~~~G~~Vtlv~~~~~   56 (125)
T d3grsa2          22 PGRSVIVG-AGYIAVEMAGILSALGSKTSLMIRHDK   56 (125)
T ss_dssp             CSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             CCEEEEEc-CCccHHHHHHHHhcCCcEEEEEeeccc
Confidence            36899999 699999999999999999999999764

>d3etja2 c.30.1.1 (A:1-78) N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain
species: Escherichia coli [TaxId: 562]

Probab=95.51  E-value=0.0089  Score=38.20  Aligned_cols=37  Identities=27%  Similarity=0.216  Sum_probs=32.7

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhh
Q 018503           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAE   88 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~   88 (355)
                      |+|.|+| +|++|+-++..-.+.|+++++++-+++...
T Consensus         2 k~vgIlG-~GQLgrMl~~Aa~~LG~~v~vldp~~~~pa   38 (78)
T d3etja2           2 KQVCVLG-NGQLGRMLRQAGEPLGIAVWPVGLDAEPAA   38 (78)
T ss_dssp             EEEEEEB-CSHHHHHHHHHHGGGTEEEEEECTTSCGGG
T ss_pred             CEEEEEc-CCHHHHHHHHHHHHcCCEEEEEcCCCCCcc
Confidence            6899999 799999999999999999999998765543

>d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=95.43  E-value=0.011  Score=41.26  Aligned_cols=35  Identities=26%  Similarity=0.325  Sum_probs=31.6

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCc
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRS   85 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~   85 (355)
                      +++++|.| .|++|-.++..|.+.|++|+.+.|.+.
T Consensus        21 p~~vvIiG-gG~~G~E~A~~l~~~g~~Vtlve~~~~   55 (115)
T d1lvla2          21 PQHLVVVG-GGYIGLELGIAYRKLGAQVSVVEARER   55 (115)
T ss_dssp             CSEEEEEC-CSHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred             CCeEEEEC-CCHHHHHHHHHHhhcccceEEEeeecc
Confidence            36899999 699999999999999999999988764

>d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=95.40  E-value=0.013  Score=41.98  Aligned_cols=36  Identities=22%  Similarity=0.343  Sum_probs=32.7

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCch
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSK   86 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~   86 (355)
                      .++|+|+| +|++|-.++..|.+.|.+|+.+.+.+.-
T Consensus        35 ~k~v~VIG-gG~iG~E~A~~l~~~g~~Vtvie~~~~~   70 (133)
T d1q1ra2          35 DNRLVVIG-GGYIGLEVAATAIKANMHVTLLDTAARV   70 (133)
T ss_dssp             TCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSSST
T ss_pred             CCEEEEEC-CchHHHHHHHHHHhhCcceeeeeecccc
Confidence            46899999 7999999999999999999999998753

>d2i76a2 c.2.1.6 (A:2-154) Hypothetical protein TM1727 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM1727
species: Thermotoga maritima [TaxId: 2336]

Probab=95.37  E-value=0.0022  Score=47.57  Aligned_cols=62  Identities=16%  Similarity=0.119  Sum_probs=37.8

Q ss_pred             EEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcCCCcEEEECC
Q 018503           53 VSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLA  124 (355)
Q Consensus        53 IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a  124 (355)
                      |-++| +|.+|+++++.|.+.++.+.+.+|+.++...+.....      ...   .+..++++..|+||-+.
T Consensus         2 IgfIG-~G~mg~~l~~~L~~~~~~~~v~~R~~~~~~~l~~~~~------~~~---~~~~~~~~~~DiVil~v   63 (153)
T d2i76a2           2 LNFVG-TGTLTRFFLECLKDRYEIGYILSRSIDRARNLAEVYG------GKA---ATLEKHPELNGVVFVIV   63 (153)
T ss_dssp             CEEES-CCHHHHHHHHTTC----CCCEECSSHHHHHHHHHHTC------CCC---CSSCCCCC---CEEECS
T ss_pred             EEEEe-CcHHHHHHHHHHHhCCCEEEEEeCChhhhcchhhccc------ccc---cchhhhhccCcEEEEec
Confidence            44677 8999999999886655545678998887766544321      111   23345677899999885

>d1a9xa4 c.30.1.1 (A:556-676) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=95.33  E-value=0.021  Score=39.60  Aligned_cols=73  Identities=8%  Similarity=0.032  Sum_probs=49.2

Q ss_pred             CCEEEEEcCC----------chHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcC--CC
Q 018503           50 QMTVSVTGAT----------GFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ--GS  117 (355)
Q Consensus        50 ~~~IlVtGat----------G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--~~  117 (355)
                      .+||||+|+.          -+.+.+.++.|.+.|++++.+..++....--.....   ...++-...+.+.++++  ++
T Consensus         4 ~kkvlViGsGp~rIGq~~EfDy~~~~a~~aLk~~g~~~IliN~NPeTVstd~d~aD---~lYfeplt~e~v~~Ii~~E~p   80 (121)
T d1a9xa4           4 REKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNCNPETVSTDYDTSD---RLYFEPVTLEDVLEIVRIEKP   80 (121)
T ss_dssp             SCEEEEECCCSCBTTBCHHHHHHHHHHHHHHHHTTCEEEEECCCTTSSTTSTTSSS---EEECCCCSHHHHHHHHHHHCC
T ss_pred             CCEEEEECCCcCcccccchhhHHHHHHHHHHHhcCCeEEEEecChhhhhcChhhcC---ceEEccCCHHHHHHHHHHhCC
Confidence            4799999963          378999999999999999999988865432111110   11233335566666663  78


Q ss_pred             cEEEECCC
Q 018503          118 TAVVNLAG  125 (355)
Q Consensus       118 d~vi~~a~  125 (355)
                      |.|+-..|
T Consensus        81 ~~ii~~~G   88 (121)
T d1a9xa4          81 KGVIVQYG   88 (121)
T ss_dssp             SEEECSSS
T ss_pred             CEEEeehh
Confidence            98886655

>d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=95.29  E-value=0.012  Score=41.42  Aligned_cols=34  Identities=26%  Similarity=0.441  Sum_probs=31.0

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCc
Q 018503           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRS   85 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~   85 (355)
                      ++|+|.| .|++|-.++..|.+.|++|+.+.|++.
T Consensus        33 ~~vvIiG-gG~iG~E~A~~l~~~g~~Vtlv~~~~~   66 (122)
T d1xhca2          33 GEAIIIG-GGFIGLELAGNLAEAGYHVKLIHRGAM   66 (122)
T ss_dssp             SEEEEEE-CSHHHHHHHHHHHHTTCEEEEECSSSC
T ss_pred             CcEEEEC-CcHHHHHHHHHhhcccceEEEEecccc
Confidence            6899999 699999999999999999999998753

>d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=95.25  E-value=0.013  Score=41.40  Aligned_cols=33  Identities=21%  Similarity=0.232  Sum_probs=30.1

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecC
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRS   83 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~   83 (355)
                      +++++|+| .|+||-.++..|.+.|.+|+.+.|+
T Consensus        20 P~~vvIIG-gG~iG~E~A~~l~~lG~~Vtii~~~   52 (122)
T d1h6va2          20 PGKTLVVG-ASYVALECAGFLAGIGLDVTVMVRS   52 (122)
T ss_dssp             CCSEEEEC-CSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred             CCeEEEEC-CCccHHHHHHHHhhcCCeEEEEEec
Confidence            35899999 6999999999999999999999875

>d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Escherichia coli [TaxId: 562]

Probab=95.19  E-value=0.024  Score=41.90  Aligned_cols=56  Identities=20%  Similarity=0.336  Sum_probs=43.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcCCCcEEEECCCCC
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTP  127 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~~  127 (355)
                      .+++|+|.|-+..+|+.++..|.++|..|+.+.....                       .+.+.++++|+||.++|.+
T Consensus        36 ~GK~v~VIGrS~~VG~Pla~lL~~~gatVt~~h~~t~-----------------------~l~~~~~~ADivI~a~G~p   91 (166)
T d1b0aa1          36 FGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTK-----------------------NLRHHVENADLLIVAVGKP   91 (166)
T ss_dssp             TTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSCS-----------------------CHHHHHHHCSEEEECSCCT
T ss_pred             ccceEEEEeccccccHHHHHHHHHhhccccccccccc-----------------------hhHHHHhhhhHhhhhccCc
Confidence            4689999999999999999999999999987654321                       2334456688888888764

>d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Leucine dehydrogenase
species: Bacillus sphaericus [TaxId: 1421]

Probab=95.12  E-value=0.012  Score=46.39  Aligned_cols=69  Identities=14%  Similarity=0.131  Sum_probs=49.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcCCCcEEEECCCC
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT  126 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~  126 (355)
                      ..++|+|-| -|.+|+++++.|.+.|.+|++.+.+.........      ....+..+.+++-  -.++|+++-||-.
T Consensus        38 ~g~~v~IqG-~GnVG~~~a~~L~~~Gakvv~~d~~~~~~~~~~~------~~g~~~~~~~~~~--~~~cDIl~PcA~~  106 (230)
T d1leha1          38 EGLAVSVQG-LGNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVA------EEGADAVAPNAIY--GVTCDIFAPCALG  106 (230)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH------HHCCEECCGGGTT--TCCCSEEEECSCS
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCEEEeecccHHHHHHHHH------hcCCcccCCcccc--cccccEecccccc
Confidence            467999999 8999999999999999999998877654433221      1123444444332  1379999999864

>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=95.04  E-value=0.0091  Score=44.70  Aligned_cols=72  Identities=24%  Similarity=0.077  Sum_probs=48.1

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCc---chhhhcCCCcEEEECCC
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEP---QWRDCIQGSTAVVNLAG  125 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~---~~~~~~~~~d~vi~~a~  125 (355)
                      ..+|+|.| +|-+|...++.+...|.+|+++++++++.......+.   ...++..+.+   .+.+...+.|.+|.+++
T Consensus        28 g~~vlv~G-~G~iG~~a~~~a~~~g~~v~~~~~~~~r~~~~k~~Ga---~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  102 (168)
T d1rjwa2          28 GEWVAIYG-IGGLGHVAVQYAKAMGLNVVAVDIGDEKLELAKELGA---DLVVNPLKEDAAKFMKEKVGGVHAAVVTAV  102 (168)
T ss_dssp             TCEEEEEC-CSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTC---SEEECTTTSCHHHHHHHHHSSEEEEEESSC
T ss_pred             CCEEEEee-cccchhhhhHHHhcCCCeEeccCCCHHHhhhhhhcCc---ceecccccchhhhhcccccCCCceEEeecC
Confidence            35899987 5999999999999999999999998887655443321   1112322332   23444456777777765

>d1s6ya1 c.2.1.5 (A:4-172) 6-phospho-beta-glucosidase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: 6-phospho-beta-glucosidase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=94.99  E-value=0.06  Score=40.13  Aligned_cols=109  Identities=9%  Similarity=0.028  Sum_probs=59.9

Q ss_pred             CCEEEEEcC-CchHHHHHHHHHHhCC----CeEEEEecCCchh--hccCCCC---CCccCCCeeecCCcchhhhcCCCcE
Q 018503           50 QMTVSVTGA-TGFIGRRLVQRLQADN----HQVRVLTRSRSKA--ELIFPGK---KTRFFPGVMIAEEPQWRDCIQGSTA  119 (355)
Q Consensus        50 ~~~IlVtGa-tG~iG~~l~~~L~~~g----~~V~~~~r~~~~~--~~~~~~~---~~~~~~~~d~~~~~~~~~~~~~~d~  119 (355)
                      +|||.|+|| +.+.+..++..+....    -++..++.+++..  +......   .........+....+..+.++++|+
T Consensus         1 k~KI~iIGaGs~~~~~~~~~l~~~~~~~~~~eI~L~Di~e~~~~~~~~d~~~~~~~~~~~~~~~~~~~td~~~al~gaDv   80 (169)
T d1s6ya1           1 RLKIATIGGGSSYTPELVEGLIKRYHELPVGELWLVDIPEGKEKLEIVGALAKRMVEKAGVPIEIHLTLDRRRALDGADF   80 (169)
T ss_dssp             CEEEEEETTTCTTHHHHHHHHHHTTTTCCEEEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCCEEEEESCHHHHHTTCSE
T ss_pred             CcEEEEECCChhhHHHHHHHHHHhccccCCCEEEEEcCCccHHHHHHHHHHHHHHHHhcCCCceeeecCCchhhcCCCCE
Confidence            379999996 3355566666555432    4888888877542  2111000   0000112344445566778899999


Q ss_pred             EEECCCCCCCCCCChh-----------------hHHHHHHHhhhhHHHHHHHHHcC
Q 018503          120 VVNLAGTPIGTRWSSE-----------------IKKEIKESRIRVTSKVVDLINES  158 (355)
Q Consensus       120 vi~~a~~~~~~~~~~~-----------------~~~~~~~~n~~~~~~l~~a~~~~  158 (355)
                      ||.+|+......+...                 .-......|+...+.+++.+.+.
T Consensus        81 Vv~ta~~~~~~~~~r~~~i~~~~gi~~~~t~g~~~~~~~~~n~~i~~~i~~~i~~~  136 (169)
T d1s6ya1          81 VTTQFRVGGLEARAKDERIPLKYGVIGQETNGPGGLFKGLRTIPVILDIIRDMEEL  136 (169)
T ss_dssp             EEECCCTTHHHHHHHHHHTGGGGTCCCCSSSTHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEccccCCCCCeehhhhhhhhcCceeccccCcchhhhccccHHHHHHHHHHHhhc
Confidence            9999986421111100                 00111235667777888887773

>d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Dihydroxypyridine hydroxylase DhpH
species: Arthrobacter nicotinovorans [TaxId: 29320]

Probab=94.96  E-value=0.017  Score=46.36  Aligned_cols=37  Identities=22%  Similarity=0.245  Sum_probs=32.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCch
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSK   86 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~   86 (355)
                      +.+||+|+| .|..|..++..|.++|++|+++.|++..
T Consensus         3 ~~~kV~IiG-aG~aGl~~A~~L~~~G~~v~v~Er~~~~   39 (265)
T d2voua1           3 TTDRIAVVG-GSISGLTAALMLRDAGVDVDVYERSPQP   39 (265)
T ss_dssp             CCSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred             CCCcEEEEC-cCHHHHHHHHHHHHCCCCEEEEeCCCCC
Confidence            347999999 6999999999999999999999987643

>d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.95  E-value=0.049  Score=40.49  Aligned_cols=36  Identities=17%  Similarity=0.194  Sum_probs=32.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCC
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSR   84 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~   84 (355)
                      .+++|.|+|-+..+|+.|+..|.++|..|+.+....
T Consensus        38 ~Gk~vvVIGrS~iVGrPLa~lL~~~gatVt~~~~~t   73 (170)
T d1a4ia1          38 AGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKT   73 (170)
T ss_dssp             TTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC
T ss_pred             ccceEEEEecCCccchHHHHHHHhccCceEEEeccc
Confidence            468999999999999999999999999999876644

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=94.86  E-value=0.015  Score=43.74  Aligned_cols=73  Identities=10%  Similarity=0.046  Sum_probs=46.6

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCC-eEEEEecCCchhhccCCCCCCccCCCeeecCC-cchhhhc-----CCCcEEEE
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRSKAELIFPGKKTRFFPGVMIAEE-PQWRDCI-----QGSTAVVN  122 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~-~~~~~~~-----~~~d~vi~  122 (355)
                      ..+|+|.|+ |.+|...++.+...|. .|+++++++++.+.....+.   ...++..+. +.+.+.+     .++|+||.
T Consensus        29 G~tVlI~Ga-GGvG~~aiq~ak~~G~~~vi~~~~~~~k~~~ak~lGa---~~~i~~~~~~~~~~~~~~~~~~~g~D~vid  104 (176)
T d2fzwa2          29 GSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGA---TECINPQDFSKPIQEVLIEMTDGGVDYSFE  104 (176)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHHTC---SEEECGGGCSSCHHHHHHHHTTSCBSEEEE
T ss_pred             CCEEEEecc-hhHHHHHHHHHHHHhcCceEEEcccHHHHHHHHHhCC---cEEEeCCchhhHHHHHHHHHcCCCCcEeee
Confidence            358999997 6789999999998885 67777777766543333221   112333322 3333322     37999999


Q ss_pred             CCCC
Q 018503          123 LAGT  126 (355)
Q Consensus       123 ~a~~  126 (355)
                      +.|.
T Consensus       105 ~~G~  108 (176)
T d2fzwa2         105 CIGN  108 (176)
T ss_dssp             CSCC
T ss_pred             cCCC
Confidence            9874

>d1b7go1 c.2.1.3 (O:1-138,O:301-340) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=94.86  E-value=0.026  Score=42.56  Aligned_cols=33  Identities=21%  Similarity=0.471  Sum_probs=28.0

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhC-CCeEEEEecCC
Q 018503           51 MTVSVTGATGFIGRRLVQRLQAD-NHQVRVLTRSR   84 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~-g~~V~~~~r~~   84 (355)
                      -||.|.| .|.||+.+++.|.++ +.+|+++....
T Consensus         2 IKVaING-fGRIGR~v~Ral~~~~dievVaInd~~   35 (178)
T d1b7go1           2 VNVAVNG-YGTIGKRVADAIIKQPDMKLVGVAKTS   35 (178)
T ss_dssp             EEEEEEC-CSHHHHHHHHHHHTCTTEEEEEEECSS
T ss_pred             eEEEEEC-CCHHHHHHHHHHHhCCCCEEEEEECCC
Confidence            4899999 899999999999987 57888876543

>d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: 2,4-dienoyl-CoA reductase, middle domain
species: Escherichia coli [TaxId: 562]

Probab=94.80  E-value=0.029  Score=42.40  Aligned_cols=38  Identities=21%  Similarity=0.305  Sum_probs=33.8

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCch
Q 018503           48 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSK   86 (355)
Q Consensus        48 ~~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~   86 (355)
                      ..+++|+|+| +|..|-.-+..|.++||+|+++.+.+.-
T Consensus        41 ~~~k~V~IIG-aGPAGL~AA~~la~~G~~Vtl~E~~~~~   78 (179)
T d1ps9a3          41 VQKKNLAVVG-AGPAGLAFAINAAARGHQVTLFDAHSEI   78 (179)
T ss_dssp             SSCCEEEEEC-CSHHHHHHHHHHHTTTCEEEEEESSSSS
T ss_pred             CCCcEEEEEC-ccHHHHHHHHHHHhhccceEEEeccCcc
Confidence            3457999999 7999999999999999999999997643

>d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Klebsiella pneumoniae [TaxId: 573]

Probab=94.74  E-value=0.02  Score=47.72  Aligned_cols=35  Identities=23%  Similarity=0.502  Sum_probs=32.1

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCc
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRS   85 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~   85 (355)
                      +|||+|+| +|.-|-..|..|.++|++|.++.++..
T Consensus         2 ~KKI~IIG-aG~sGL~aA~~L~k~G~~V~viEk~~~   36 (314)
T d2bi7a1           2 SKKILIVG-AGFSGAVIGRQLAEKGHQVHIIDQRDH   36 (314)
T ss_dssp             CCEEEEEC-CSHHHHHHHHHHHTTTCEEEEEESSSS
T ss_pred             CCEEEEEC-CcHHHHHHHHHHHhCCCCEEEEECCCC
Confidence            47999999 799999999999999999999998764

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=94.71  E-value=0.019  Score=43.09  Aligned_cols=71  Identities=20%  Similarity=0.195  Sum_probs=46.0

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhCC-CeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhc-----CCCcEEEECC
Q 018503           51 MTVSVTGATGFIGRRLVQRLQADN-HQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCI-----QGSTAVVNLA  124 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~-----~~~d~vi~~a  124 (355)
                      .+|+|.|+ |.+|...++.+...| ..|+++++++++.........   ...++. +.+.+....     .++|+||.++
T Consensus        34 ~~vli~Ga-G~vG~~~~~~a~~~g~~~vv~~~~~~~k~~~~~~~ga---~~~i~~-~~~~~~~~~~~~~~~g~d~vid~~  108 (172)
T d1h2ba2          34 AYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKLKLAERLGA---DHVVDA-RRDPVKQVMELTRGRGVNVAMDFV  108 (172)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHHHTTC---SEEEET-TSCHHHHHHHHTTTCCEEEEEESS
T ss_pred             CEEEEeCC-ChHHHHHHHHHHhhcCcccccccchhHHHHHHhhccc---ceeecC-cccHHHHHHHhhCCCCceEEEEec
Confidence            57999885 999999999988877 477778888766554443321   111222 223333222     2689999998


Q ss_pred             CC
Q 018503          125 GT  126 (355)
Q Consensus       125 ~~  126 (355)
                      +.
T Consensus       109 g~  110 (172)
T d1h2ba2         109 GS  110 (172)
T ss_dssp             CC
T ss_pred             Cc
Confidence            74

>d2gv8a2 c.3.1.5 (A:181-287) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavin-dependent monoxygenase SPBP16F5.08c
species: Schizosaccharomyces pombe [TaxId: 4896]

Probab=94.70  E-value=0.02  Score=39.28  Aligned_cols=37  Identities=16%  Similarity=0.038  Sum_probs=29.7

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCc
Q 018503           48 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRS   85 (355)
Q Consensus        48 ~~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~   85 (355)
                      -..|+|+|.| +|.-|.-++..|.+..-+++...|...
T Consensus        30 f~gK~VlVVG-~g~Sa~dia~~l~~~ak~v~~~~~r~~   66 (107)
T d2gv8a2          30 FVGESVLVVG-GASSANDLVRHLTPVAKHPIYQSLLGG   66 (107)
T ss_dssp             GTTCCEEEEC-SSHHHHHHHHHHTTTSCSSEEEECTTC
T ss_pred             cCCCeEEEEC-CCCCHHHHHHHHHHhcCEEEEEEecCc
Confidence            3568999999 799999999999988766666666543

>d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=94.69  E-value=0.02  Score=40.47  Aligned_cols=35  Identities=14%  Similarity=0.193  Sum_probs=31.8

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCc
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRS   85 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~   85 (355)
                      +++++|.| .|++|-.++..|.+.|.+|+.+.+.+.
T Consensus        26 p~~vvIiG-gG~IG~E~A~~~~~~G~~Vtive~~~~   60 (125)
T d1ojta2          26 PGKLLIIG-GGIIGLEMGTVYSTLGSRLDVVEMMDG   60 (125)
T ss_dssp             CSEEEEES-CSHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred             CCeEEEEC-CCHHHHHHHHHhhcCCCEEEEEEeecc
Confidence            36899999 699999999999999999999999764

>d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=94.68  E-value=0.018  Score=40.65  Aligned_cols=36  Identities=19%  Similarity=0.255  Sum_probs=32.7

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCch
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSK   86 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~   86 (355)
                      +++++|+| .|++|-.++..|.+.|.+|+++.|++.-
T Consensus        25 p~~~viiG-~G~iglE~A~~~~~~G~~Vtvi~~~~~~   60 (123)
T d1dxla2          25 PKKLVVIG-AGYIGLEMGSVWGRIGSEVTVVEFASEI   60 (123)
T ss_dssp             CSEEEESC-CSHHHHHHHHHHHHHTCEEEEECSSSSS
T ss_pred             CCeEEEEc-cchHHHHHHHHHHhcCCeEEEEEEcccc
Confidence            36899999 6999999999999999999999998754

>d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Nicotinamide nucleotide transhydrogenase dI component
species: Rhodospirillum rubrum [TaxId: 1085]

Probab=94.48  E-value=0.045  Score=41.08  Aligned_cols=74  Identities=15%  Similarity=0.057  Sum_probs=53.4

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCee----------------------ecCCc
Q 018503           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVM----------------------IAEEP  108 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d----------------------~~~~~  108 (355)
                      -+|+|+| .|-.|..-++.....|..|++++.+....+.+......  +..++                      ....+
T Consensus        30 a~VvViG-aGvaG~~Aa~~A~~lGA~V~v~D~~~~~~~~l~~l~~~--~i~~~~~~~~~~~~~~gyA~~~s~~~~~~~~~  106 (183)
T d1l7da1          30 ARVLVFG-VGVAGLQAIATAKRLGAVVMATDVRAATKEQVESLGGK--FITVDDEAMKTAETAGGYAKEMGEEFRKKQAE  106 (183)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCSTTHHHHHHTTCE--ECCC-----------------------CCHHH
T ss_pred             cEEEEEc-CcHHHHHHHHHHHHcCCEEEEEeccHHHHHHHHHhhcc--eEEEeccccccccccccchhhcCHHHHHHHHH
Confidence            4899999 69999999999999999999999998776655432110  11110                      01233


Q ss_pred             chhhhcCCCcEEEECCCCC
Q 018503          109 QWRDCIQGSTAVVNLAGTP  127 (355)
Q Consensus       109 ~~~~~~~~~d~vi~~a~~~  127 (355)
                      .+.+.++++|+||-.+-.+
T Consensus       107 ~l~~~l~~aDlVI~talip  125 (183)
T d1l7da1         107 AVLKELVKTDIAITTALIP  125 (183)
T ss_dssp             HHHHHHTTCSEEEECCCCT
T ss_pred             HHHHHHHhhhhheeeeecC
Confidence            4566678999999998775

>d1u8xx1 c.2.1.5 (X:3-169) Maltose-6'-phosphate glucosidase GlvA {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Maltose-6'-phosphate glucosidase GlvA
species: Bacillus subtilis [TaxId: 1423]

Probab=94.46  E-value=0.022  Score=42.53  Aligned_cols=76  Identities=11%  Similarity=0.133  Sum_probs=45.5

Q ss_pred             CEEEEEcCCchHHHH-HHHHHHhC-----CCeEEEEecCCchhhccCCCC---CCccCCCeeecCCcchhhhcCCCcEEE
Q 018503           51 MTVSVTGATGFIGRR-LVQRLQAD-----NHQVRVLTRSRSKAELIFPGK---KTRFFPGVMIAEEPQWRDCIQGSTAVV  121 (355)
Q Consensus        51 ~~IlVtGatG~iG~~-l~~~L~~~-----g~~V~~~~r~~~~~~~~~~~~---~~~~~~~~d~~~~~~~~~~~~~~d~vi  121 (355)
                      .||.|+|| |.+|.. ++..|+..     +-+|..++.++++.+......   .........+.-..+..++++++|+||
T Consensus         4 ~KI~iIGa-Gsv~~~~~~~~ll~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~eal~~AD~Vv   82 (167)
T d1u8xx1           4 FSIVIAGG-GSTFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIAGACDVFIREKAPDIEFAATTDPEEAFTDVDFVM   82 (167)
T ss_dssp             EEEEEECT-TSSSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHHHHHHHHHHHHHHCTTSEEEEESCHHHHHSSCSEEE
T ss_pred             ceEEEECC-ChhhhHHHHHHHHhhhhhcCCCEEEEEcCChhHHHHHHHHHHHHHHHhCCCcceEecCChhhccCCCCEEE
Confidence            58999997 545543 44455442     248999999887654211100   000011233334456778899999999


Q ss_pred             ECCCCC
Q 018503          122 NLAGTP  127 (355)
Q Consensus       122 ~~a~~~  127 (355)
                      ..++..
T Consensus        83 itag~~   88 (167)
T d1u8xx1          83 AHIRVG   88 (167)
T ss_dssp             ECCCTT
T ss_pred             ECCCcC
Confidence            999864

>d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Molybdenum cofactor biosynthesis protein MoeB
domain: Molybdenum cofactor biosynthesis protein MoeB
species: Escherichia coli [TaxId: 562]

Probab=94.40  E-value=0.11  Score=41.32  Aligned_cols=33  Identities=21%  Similarity=0.234  Sum_probs=28.9

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhCCC-eEEEEecCC
Q 018503           51 MTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSR   84 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~   84 (355)
                      .+|+|.| .|.+|++++..|...|. +++.++.+.
T Consensus        31 ~~VliiG-~GglGs~va~~La~~Gvg~i~lvD~D~   64 (247)
T d1jw9b_          31 SRVLIVG-LGGLGCAASQYLASAGVGNLTLLDFDT   64 (247)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred             CCEEEEC-CCHHHHHHHHHHHHcCCCeEEEECCcc
Confidence            5899999 79999999999999996 788887654

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=94.35  E-value=0.023  Score=43.66  Aligned_cols=73  Identities=16%  Similarity=0.060  Sum_probs=47.1

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCC-eEEEEecCCchhhccCCCCCCccCCCeeecCCc---chhhhcC--CCcEEEEC
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEP---QWRDCIQ--GSTAVVNL  123 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~---~~~~~~~--~~d~vi~~  123 (355)
                      ..+|+|+| +|-+|...+..+...|. +|+++++++++.......+.   ...++..+.+   .+.++..  ++|++|.+
T Consensus        26 G~tVlV~G-aG~vGl~a~~~ak~~ga~~Vi~~d~~~~rl~~a~~~Ga---~~~~~~~~~~~~~~i~~~t~g~g~D~vid~  101 (195)
T d1kola2          26 GSTVYVAG-AGPVGLAAAASARLLGAAVVIVGDLNPARLAHAKAQGF---EIADLSLDTPLHEQIAALLGEPEVDCAVDA  101 (195)
T ss_dssp             TCEEEEEC-CSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTC---EEEETTSSSCHHHHHHHHHSSSCEEEEEEC
T ss_pred             CCEEEEEC-cCHHHHHHHHHHHhhcccceeeecccchhhHhhhhccc---cEEEeCCCcCHHHHHHHHhCCCCcEEEEEC
Confidence            45899998 59999888888877775 88888888776554333221   1111112222   2333333  68999999


Q ss_pred             CCC
Q 018503          124 AGT  126 (355)
Q Consensus       124 a~~  126 (355)
                      .|.
T Consensus       102 vG~  104 (195)
T d1kola2         102 VGF  104 (195)
T ss_dssp             CCT
T ss_pred             ccc
Confidence            885

>d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase
species: Xanthobacter sp., py2 [TaxId: 35809]

Probab=94.25  E-value=0.038  Score=38.60  Aligned_cols=35  Identities=20%  Similarity=0.155  Sum_probs=31.8

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCc
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRS   85 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~   85 (355)
                      .++|+|.| +|++|-.++..|.+.|.+|+.+.|.+.
T Consensus        22 ~~~vvVvG-gG~ig~E~A~~l~~~g~~vt~i~~~~~   56 (121)
T d1mo9a2          22 GSTVVVVG-GSKTAVEYGCFFNATGRRTVMLVRTEP   56 (121)
T ss_dssp             CSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCT
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHhcchhheEeeccch
Confidence            46899999 799999999999999999999999764

>d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Myxococcus xanthus [TaxId: 34]

Probab=94.24  E-value=0.021  Score=46.73  Aligned_cols=34  Identities=26%  Similarity=0.431  Sum_probs=31.2

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCc
Q 018503           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRS   85 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~   85 (355)
                      |+|+|+| +|.-|-..+..|.++|++|+++.+++.
T Consensus         1 m~V~IIG-aG~aGL~aA~~L~~~G~~V~vlE~~~~   34 (347)
T d2ivda1           1 MNVAVVG-GGISGLAVAHHLRSRGTDAVLLESSAR   34 (347)
T ss_dssp             CCEEEEC-CBHHHHHHHHHHHTTTCCEEEECSSSS
T ss_pred             CeEEEEC-CCHHHHHHHHHHHhCCCCEEEEecCCC
Confidence            6899999 599999999999999999999998754

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=94.18  E-value=0.051  Score=40.70  Aligned_cols=73  Identities=15%  Similarity=0.064  Sum_probs=47.0

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCC-CeEEEEecCCchhhccCCCCCCccCCCeeecCCcch-hh---hc--CCCcEEEE
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADN-HQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQW-RD---CI--QGSTAVVN  122 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~-~~---~~--~~~d~vi~  122 (355)
                      ..+|+|+|+ |-+|...+..+...| .+|+++++++++.+.....+.   ...++..+.+.. .+   ..  .++|++|.
T Consensus        29 g~~VlI~G~-Gg~g~~~~~~~~~~g~~~Vi~~~~~~~rl~~a~~~GA---d~~in~~~~~~~~~~~~~~~~~~G~d~vid  104 (175)
T d1cdoa2          29 GSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGA---TDFVNPNDHSEPISQVLSKMTNGGVDFSLE  104 (175)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTC---CEEECGGGCSSCHHHHHHHHHTSCBSEEEE
T ss_pred             CCEEEEEec-CCccchHHHHHHHHhhchheeecchHHHHHHHHHcCC---cEEEcCCCcchhHHHHHHhhccCCcceeee
Confidence            358999996 557777777777775 589999998887665444332   222344333322 22   22  37999999


Q ss_pred             CCCC
Q 018503          123 LAGT  126 (355)
Q Consensus       123 ~a~~  126 (355)
                      +.|.
T Consensus       105 ~~G~  108 (175)
T d1cdoa2         105 CVGN  108 (175)
T ss_dssp             CSCC
T ss_pred             ecCC
Confidence            9874

>d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]

Probab=94.16  E-value=0.031  Score=41.04  Aligned_cols=70  Identities=13%  Similarity=0.144  Sum_probs=53.2

Q ss_pred             cCCCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcCCCcEEEECCCC
Q 018503           47 KASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT  126 (355)
Q Consensus        47 ~~~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~  126 (355)
                      +...++++|.| -|.+|+-+++.|...|-+|+++..+|-...+-.       ...+.+   ..++++++..|++|-+.|.
T Consensus        20 ~laGk~vvV~G-YG~vGrG~A~~~rg~Ga~V~V~E~DPi~alqA~-------mdGf~v---~~~~~a~~~aDi~vTaTGn   88 (163)
T d1v8ba1          20 LISGKIVVICG-YGDVGKGCASSMKGLGARVYITEIDPICAIQAV-------MEGFNV---VTLDEIVDKGDFFITCTGN   88 (163)
T ss_dssp             CCTTSEEEEEC-CSHHHHHHHHHHHHHTCEEEEECSCHHHHHHHH-------TTTCEE---CCHHHHTTTCSEEEECCSS
T ss_pred             eecCCEEEEec-ccccchhHHHHHHhCCCEEEEEecCchhhHHHH-------hcCCcc---CchhHccccCcEEEEcCCC
Confidence            34567899999 999999999999999999999999885432211       222333   4566888889999999885


Q ss_pred             C
Q 018503          127 P  127 (355)
Q Consensus       127 ~  127 (355)
                      .
T Consensus        89 ~   89 (163)
T d1v8ba1          89 V   89 (163)
T ss_dssp             S
T ss_pred             C
Confidence            3

>d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 2
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=94.09  E-value=0.029  Score=42.74  Aligned_cols=35  Identities=9%  Similarity=0.140  Sum_probs=31.3

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCC-eEEEEecCCc
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRS   85 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~   85 (355)
                      ++||+|+| +|..|-..+..|.+.|+ +|+++.|++.
T Consensus         4 ~~kVaIIG-aGpaGl~aA~~l~~~G~~~V~v~E~~~~   39 (196)
T d1gtea4           4 SAKIALLG-AGPASISCASFLARLGYSDITIFEKQEY   39 (196)
T ss_dssp             GCCEEEEC-CSHHHHHHHHHHHHTTCCCEEEEESSSS
T ss_pred             CCEEEEEC-ChHHHHHHHHHHHHCCCCeEEEEEecCc
Confidence            47899999 69999999999999998 5999998764

>d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Escherichia coli [TaxId: 562]

Probab=93.92  E-value=0.031  Score=40.74  Aligned_cols=35  Identities=20%  Similarity=0.396  Sum_probs=29.7

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhC--CCeEEEEecCCc
Q 018503           51 MTVSVTGATGFIGRRLVQRLQAD--NHQVRVLTRSRS   85 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~   85 (355)
                      ++|.|.|+||-||....+-+.+.  .++|.+++-...
T Consensus         2 K~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~Lsa~~N   38 (151)
T d1q0qa2           2 KQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAGKN   38 (151)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHCTTTEEEEEEEESSC
T ss_pred             CeEEEEcCCcHHHHHHHHHHHhCCCCcEEEEEEecCc
Confidence            57999999999999999999886  478988876543

>d1cf2o1 c.2.1.3 (O:1-138,O:304-336) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Methanothermus fervidus [TaxId: 2180]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Methanothermus fervidus [TaxId: 2180]

Probab=93.91  E-value=0.066  Score=39.96  Aligned_cols=32  Identities=19%  Similarity=0.486  Sum_probs=26.7

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhCC-CeEEEEecC
Q 018503           51 MTVSVTGATGFIGRRLVQRLQADN-HQVRVLTRS   83 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~g-~~V~~~~r~   83 (355)
                      ++|.|-| -|.||+.+++.|.+++ .+|+++...
T Consensus         2 ~~VgING-fGRIGR~v~R~l~~~~di~vvaInd~   34 (171)
T d1cf2o1           2 KAVAING-YGTVGKRVADAIAQQDDMKVIGVSKT   34 (171)
T ss_dssp             EEEEEEC-CSHHHHHHHHHHHTSSSEEEEEEEES
T ss_pred             eEEEEEc-CcHHHHHHHHHHHhCCCceEEEEecC
Confidence            5899998 8999999999998875 677776653

>d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Zymomonas mobilis [TaxId: 542]

Probab=93.76  E-value=0.03  Score=40.82  Aligned_cols=36  Identities=39%  Similarity=0.496  Sum_probs=30.5

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhC--CCeEEEEecCCc
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQAD--NHQVRVLTRSRS   85 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~   85 (355)
                      +++|.|+|+||-||....+-+.+.  .++|.+++-...
T Consensus         2 pK~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~lsa~~N   39 (150)
T d1r0ka2           2 PRTVTVLGATGSIGHSTLDLIERNLDRYQVIALTANRN   39 (150)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTGGGEEEEEEEESSC
T ss_pred             CcEEEEECCCcHHHHHHHHHHHcCCCCcEEEEEEeCCC
Confidence            368999999999999999999875  589998876543

>d2cvza2 c.2.1.6 (A:2-157) Hydroxyisobutyrate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=93.63  E-value=0.058  Score=39.57  Aligned_cols=37  Identities=24%  Similarity=0.253  Sum_probs=30.2

Q ss_pred             EEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhcc
Q 018503           52 TVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELI   90 (355)
Q Consensus        52 ~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~   90 (355)
                      ||.++| .|.+|..+++.|++.|+.+ +..|+.++....
T Consensus         2 kIg~IG-lG~MG~~ma~~L~~~g~~~-~~~~~~~~~~~~   38 (156)
T d2cvza2           2 KVAFIG-LGAMGYPMAGHLARRFPTL-VWNRTFEKALRH   38 (156)
T ss_dssp             CEEEEC-CSTTHHHHHHHHHTTSCEE-EECSSTHHHHHH
T ss_pred             eEEEEe-HHHHHHHHHHHHHhCCCEE-EEeCCHHHHHHH
Confidence            689999 7999999999999999876 567777665443

>d1vkza2 c.30.1.1 (A:4-93) Glycinamide ribonucleotide synthetase (GAR-syn), N-domain {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Glycinamide ribonucleotide synthetase (GAR-syn), N-domain
species: Thermotoga maritima [TaxId: 2336]

Probab=93.62  E-value=0.16  Score=33.09  Aligned_cols=32  Identities=13%  Similarity=0.160  Sum_probs=27.3

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhCCCeEEEEecC
Q 018503           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRS   83 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~   83 (355)
                      |||||+| +|-=-.+|+..|.++.++|+++--+
T Consensus         1 MkVLviG-sGgREHAia~~l~~s~~~v~~~pGN   32 (90)
T d1vkza2           1 VRVHILG-SGGREHAIGWAFAKQGYEVHFYPGN   32 (90)
T ss_dssp             CEEEEEE-CSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred             CEEEEEC-CCHHHHHHHHHHhcCCCeEEEecCC
Confidence            7999999 6777889999999999999987543

>d1tlta1 c.2.1.3 (A:5-127,A:268-308) Virulence factor MviM {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Virulence factor MviM
species: Escherichia coli [TaxId: 562]

Probab=93.54  E-value=0.038  Score=40.96  Aligned_cols=66  Identities=18%  Similarity=0.206  Sum_probs=42.0

Q ss_pred             CCEEEEEcCCchHHHH-HHHHHHhC-CCeEEEEe-cCCchhhccCCCCCCccCCCeeecCCcchhhhcCCCcEEEECC
Q 018503           50 QMTVSVTGATGFIGRR-LVQRLQAD-NHQVRVLT-RSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLA  124 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~-l~~~L~~~-g~~V~~~~-r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a  124 (355)
                      +|||.|+| +|.+|+. .++.|... +.+++++. ++++........     + ++.+  .+.++.+.+++|+|+-+.
T Consensus         1 Kiri~iIG-~G~~g~~~~~~~l~~~~~~~i~~v~d~~~~~~~~~~~~-----~-~~~~--~~~~~~l~~~~D~V~I~t   69 (164)
T d1tlta1           1 KLRIGVVG-LGGIAQKAWLPVLAAASDWTLQGAWSPTRAKALPICES-----W-RIPY--ADSLSSLAASCDAVFVHS   69 (164)
T ss_dssp             CEEEEEEC-CSTHHHHTHHHHHHSCSSEEEEEEECSSCTTHHHHHHH-----H-TCCB--CSSHHHHHTTCSEEEECS
T ss_pred             CCEEEEEc-CCHHHHHHHHHHHHhCCCcEEEEEEechhHhhhhhhhc-----c-cccc--cccchhhhhhcccccccc
Confidence            37899999 7999975 56777664 67877655 555544433221     1 1233  334556667899998775

>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: L-aminoacid oxidase
species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]

Probab=93.47  E-value=0.043  Score=45.51  Aligned_cols=36  Identities=31%  Similarity=0.408  Sum_probs=32.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCc
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRS   85 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~   85 (355)
                      .+++|+|+| +|..|-..+..|.++|++|+++.+++.
T Consensus        29 ~pkkV~IIG-aG~aGLsaA~~L~~~G~~V~vlE~~~~   64 (370)
T d2iida1          29 NPKHVVIVG-AGMAGLSAAYVLAGAGHQVTVLEASER   64 (370)
T ss_dssp             SCCEEEEEC-CBHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred             CCCeEEEEC-CCHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence            457999999 799999999999999999999998764

>d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Potassium channel-related protein MthK
species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]

Probab=93.41  E-value=0.023  Score=40.37  Aligned_cols=69  Identities=14%  Similarity=0.087  Sum_probs=48.4

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhc-CCCcEEEECC
Q 018503           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCI-QGSTAVVNLA  124 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~-~~~d~vi~~a  124 (355)
                      ++|+|.| -|-+|+.+++.|  ++++|.+++.+++..........  .....|..+++.+.++- .+++.+|-+.
T Consensus         1 kHivI~G-~g~~g~~l~~~L--~~~~i~vi~~d~~~~~~~~~~~~--~~i~Gd~~~~~~L~~a~i~~A~~vi~~~   70 (129)
T d2fy8a1           1 RHVVICG-WSESTLECLREL--RGSEVFVLAEDENVRKKVLRSGA--NFVHGDPTRVSDLEKANVRGARAVIVNL   70 (129)
T ss_dssp             CCEEEES-CCHHHHHHHHTS--CGGGEEEEESCTTHHHHHHHTTC--EEEESCTTSHHHHHHTTCTTCSEEEECC
T ss_pred             CEEEEEC-CCHHHHHHHHHH--cCCCCEEEEcchHHHHHHHhcCc--cccccccCCHHHHHHhhhhcCcEEEEec
Confidence            3588888 699999999998  46678888888876554432211  12335777887776643 5789998775

>d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, middle domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=93.15  E-value=0.077  Score=41.73  Aligned_cols=38  Identities=16%  Similarity=0.211  Sum_probs=33.5

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCch
Q 018503           48 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSK   86 (355)
Q Consensus        48 ~~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~   86 (355)
                      ...++|+|+| +|..|-..+..|.+.|++|+++.++..-
T Consensus        47 ~~~k~VvIIG-aGpAGl~aA~~l~~~G~~v~l~E~~~~~   84 (233)
T d1djqa3          47 KNKDSVLIVG-AGPSGSEAARVLMESGYTVHLTDTAEKI   84 (233)
T ss_dssp             SSCCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSSST
T ss_pred             cCCceEEEEc-ccHHHHHHHHHHHHhccceeeEeecccc
Confidence            3457999999 6999999999999999999999987643

>d1iuka_ c.2.1.8 (A:) Hypothetical protein TT1466 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein TT1466
species: Thermus thermophilus [TaxId: 274]

Probab=93.03  E-value=0.12  Score=36.91  Aligned_cols=64  Identities=14%  Similarity=0.045  Sum_probs=42.4

Q ss_pred             CCEEEEEcCC---chHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcCCCcEEEECCC
Q 018503           50 QMTVSVTGAT---GFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG  125 (355)
Q Consensus        50 ~~~IlVtGat---G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~  125 (355)
                      .++|.|+|||   +..|..+++.|.+.||+++.+.-++.. ....           ...-..++.++-..+|.|+-+..
T Consensus        13 pksIAVVGaS~~~~k~g~~v~~~L~~~g~~~~~v~~~~~~-~~i~-----------g~~~~~~l~~i~~~iD~v~v~~p   79 (136)
T d1iuka_          13 AKTIAVLGAHKDPSRPAHYVPRYLREQGYRVLPVNPRFQG-EELF-----------GEEAVASLLDLKEPVDILDVFRP   79 (136)
T ss_dssp             CCEEEEETCCSSTTSHHHHHHHHHHHTTCEEEEECGGGTT-SEET-----------TEECBSSGGGCCSCCSEEEECSC
T ss_pred             CCeEEEEeecCCCCCchHHHHHHHhcCCCCceEEEecccc-ceee-----------ceecccchhhccCCCceEEEecc
Confidence            3689999998   679999999999999998876543321 1111           11122344444457898887753

>d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Tobacco (Nicotiana tabacum) [TaxId: 4097]

Probab=92.99  E-value=0.06  Score=43.97  Aligned_cols=34  Identities=24%  Similarity=0.325  Sum_probs=31.2

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCc
Q 018503           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRS   85 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~   85 (355)
                      |||+|+| +|.-|-..+..|.+.|++|+++.+++.
T Consensus         2 KkV~IIG-aG~aGL~aA~~La~~G~~V~vlE~~~~   35 (373)
T d1seza1           2 KRVAVIG-AGVSGLAAAYKLKIHGLNVTVFEAEGK   35 (373)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHTTSCEEEEECSSSS
T ss_pred             CEEEEEC-cCHHHHHHHHHHHhCCCCEEEEeCCCC
Confidence            7899999 799999999999999999999998653

>d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Glycine oxidase ThiO
species: Bacillus sp. [TaxId: 1409]

Probab=92.96  E-value=0.049  Score=43.92  Aligned_cols=32  Identities=22%  Similarity=0.401  Sum_probs=29.7

Q ss_pred             EEEEEcCCchHHHHHHHHHHhCCCeEEEEecCC
Q 018503           52 TVSVTGATGFIGRRLVQRLQADNHQVRVLTRSR   84 (355)
Q Consensus        52 ~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~   84 (355)
                      .|+|+| +|.+|..++.+|.++|++|+++.+..
T Consensus         6 DvvIIG-aGi~Gls~A~~La~~G~~V~vlE~~~   37 (276)
T d1ryia1           6 EAVVIG-GGIIGSAIAYYLAKENKNTALFESGT   37 (276)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             CEEEEC-cCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence            399999 69999999999999999999999865

>d1hwxa1 c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Cow (Bos taurus) [TaxId: 9913]

Probab=92.90  E-value=0.096  Score=42.48  Aligned_cols=35  Identities=20%  Similarity=0.235  Sum_probs=31.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCC
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSR   84 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~   84 (355)
                      ..++|+|-| .|.+|+++++.|.+.|.+|++++-+.
T Consensus        35 ~gktvaIqG-fGnVG~~~A~~L~e~Gakvv~vsD~~   69 (293)
T d1hwxa1          35 GDKTFAVQG-FGNVGLHSMRYLHRFGAKCVAVGESD   69 (293)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEEETT
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEEccc
Confidence            457899999 79999999999999999999988653

>d1w5fa1 c.32.1.1 (A:22-215) Cell-division protein FtsZ {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: Tubulin nucleotide-binding domain-like
superfamily: Tubulin nucleotide-binding domain-like
family: Tubulin, GTPase domain
domain: Cell-division protein FtsZ
species: Thermotoga maritima [TaxId: 2336]

Probab=92.88  E-value=0.14  Score=38.86  Aligned_cols=97  Identities=16%  Similarity=0.188  Sum_probs=60.0

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhCC---CeEEEEecCCchhhccCCCC------CCc--cCCCeee--------cCCcchh
Q 018503           51 MTVSVTGATGFIGRRLVQRLQADN---HQVRVLTRSRSKAELIFPGK------KTR--FFPGVMI--------AEEPQWR  111 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~g---~~V~~~~r~~~~~~~~~~~~------~~~--~~~~~d~--------~~~~~~~  111 (355)
                      |||.|+| -|.-|..++..|.+.+   .+.++++-+...........      ...  .-.+.|.        .+.+.+.
T Consensus         1 ~kI~viG-vGGaG~n~v~~l~~~~~~~v~~iainTD~~~L~~~~a~~ki~iG~~~t~G~G~g~~p~~g~~aa~e~~~~I~   79 (194)
T d1w5fa1           1 LKIKVIG-VGGAGNNAINRMIEIGIHGVEFVAVNTDLQVLEASNADVKIQIGENITRGLGAGGRPEIGEQAALESEEKIR   79 (194)
T ss_dssp             CCEEEEE-EHHHHHHHHHHHHHHCCTTEEEEEEESCHHHHHTCCCSEEEECCTTTTTTSCCTTCHHHHHHHHHHTHHHHH
T ss_pred             CeEEEEE-eCchHHHHHHHHHHcCCCceEEEEEcCCHHHHhcCCcceEEecccccCCCcccccCchhhHhHHHHHHHHHH
Confidence            5799999 7999999999999875   46666666544333211100      000  0001111        1456788


Q ss_pred             hhcCCCcEEEECCCCCCCCCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCC
Q 018503          112 DCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVR  163 (355)
Q Consensus       112 ~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~  163 (355)
                      +.++++|.||-+||....             +-..++-.+.+.+++  .+..
T Consensus        80 ~~l~~~d~vfi~AGlGGg-------------TGtgaapviA~~ake--~g~l  116 (194)
T d1w5fa1          80 EVLQDTHMVFITAGFGGG-------------TGTGASPVIAKIAKE--MGIL  116 (194)
T ss_dssp             HHTTTCSEEEEEEETTSS-------------HHHHHHHHHHHHHHH--TTCE
T ss_pred             HHhcCCCeEEEEEecCCC-------------cccchHHHHHHHHHH--cCCc
Confidence            889999999999998543             223344456788888  4543

>d2gv8a1 c.3.1.5 (A:3-180,A:288-444) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavin-dependent monoxygenase SPBP16F5.08c
species: Schizosaccharomyces pombe [TaxId: 4896]

Probab=92.84  E-value=0.072  Score=44.47  Aligned_cols=37  Identities=24%  Similarity=0.347  Sum_probs=31.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCC--CeEEEEecCCch
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADN--HQVRVLTRSRSK   86 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~   86 (355)
                      .++||+|+| +|.-|-..+..|+++|  ++|+++.|+..-
T Consensus         3 ~~KrVaIIG-aG~sGl~~A~~L~~~~~~~~v~vfEk~~~i   41 (335)
T d2gv8a1           3 TIRKIAIIG-AGPSGLVTAKALLAEKAFDQVTLFERRGSP   41 (335)
T ss_dssp             SCCEEEEEC-CSHHHHHHHHHHHTTTCCSEEEEECSSSSS
T ss_pred             CCCeEEEEC-cCHHHHHHHHHHHHhCCCCCEEEEECCCCC
Confidence            447899999 6999999999998876  699999998753

>d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit
species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]

Probab=92.79  E-value=0.064  Score=39.96  Aligned_cols=34  Identities=18%  Similarity=0.247  Sum_probs=29.6

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCC--CeEEEEecCC
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADN--HQVRVLTRSR   84 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~   84 (355)
                      .+||+|+| .|++|-.++..|.+.+  .+|+++.+.+
T Consensus         2 gkrivIvG-gG~~G~e~A~~l~~~~~~~~Vtlie~~~   37 (186)
T d1fcda1           2 GRKVVVVG-GGTGGATAAKYIKLADPSIEVTLIEPNT   37 (186)
T ss_dssp             CCEEEEEC-CSHHHHHHHHHHHHHCTTSEEEEECSCS
T ss_pred             CCcEEEEC-ccHHHHHHHHHHHHcCCCCcEEEEECCC
Confidence            47999999 6999999999999977  4888888765

>d1up7a1 c.2.1.5 (A:1-162) 6-phospho-beta-glucosidase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: 6-phospho-beta-glucosidase
species: Thermotoga maritima [TaxId: 2336]

Probab=92.68  E-value=0.031  Score=41.50  Aligned_cols=76  Identities=12%  Similarity=0.053  Sum_probs=44.1

Q ss_pred             CEEEEEcCCchHHHHHHH-HHHh-C----CCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcCCCcEEEECC
Q 018503           51 MTVSVTGATGFIGRRLVQ-RLQA-D----NHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLA  124 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~-~L~~-~----g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a  124 (355)
                      |||.|+|| |-+|...+- .|+. .    ..++..++.++++................++.-.....+.++++|+||..|
T Consensus         1 mKIaiIGa-Gs~g~~~~~~~l~~~~~~~~~~el~L~Did~~k~~~~~d~~~~~~~~~~~~~~t~~~~~~l~~aDvVVita   79 (162)
T d1up7a1           1 MRIAVIGG-GSSYTPELVKGLLDISEDVRIDEVIFYDIDEEKQKIVVDFVKRLVKDRFKVLISDTFEGAVVDAKYVIFQF   79 (162)
T ss_dssp             CEEEEETT-TCTTHHHHHHHHHHHTTTSCCCEEEEECSCHHHHHHHHHHHHHHHTTSSEEEECSSHHHHHTTCSEEEECC
T ss_pred             CEEEEECC-CHHHHHHHHHHHHhcccccCccEEEEEecCcHHHHHHHHHHHhhhccCceEEEecCcccccCCCCEEEEec
Confidence            78999997 556655553 2322 1    368999999877644211100000011122222344567789999999999


Q ss_pred             CCC
Q 018503          125 GTP  127 (355)
Q Consensus       125 ~~~  127 (355)
                      +..
T Consensus        80 ~~~   82 (162)
T d1up7a1          80 RPG   82 (162)
T ss_dssp             CTT
T ss_pred             ccC
Confidence            863

>d1nhpa1 c.3.1.5 (A:1-119,A:243-321) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=92.67  E-value=0.064  Score=40.98  Aligned_cols=33  Identities=21%  Similarity=0.278  Sum_probs=28.9

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhC--CCeEEEEecCC
Q 018503           51 MTVSVTGATGFIGRRLVQRLQAD--NHQVRVLTRSR   84 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~   84 (355)
                      |||+|+| .|++|-.++..|.+.  +.+|+.+.|..
T Consensus         1 ~KVvIIG-gG~~G~e~A~~l~~~~~~~~V~v~~~~~   35 (198)
T d1nhpa1           1 MKVIVLG-SSHGGYEAVEELLNLHPDAEIQWYEKGD   35 (198)
T ss_dssp             CEEEEEC-SSHHHHHHHHHHHHHCTTSEEEEEESSS
T ss_pred             CEEEEEC-CcHHHHHHHHHHHhcCCCCeEEEEeCCC
Confidence            7999999 699999999999886  56899988865

>d2vapa1 c.32.1.1 (A:23-231) Cell-division protein FtsZ {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: Tubulin nucleotide-binding domain-like
superfamily: Tubulin nucleotide-binding domain-like
family: Tubulin, GTPase domain
domain: Cell-division protein FtsZ
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=92.51  E-value=0.17  Score=38.82  Aligned_cols=104  Identities=16%  Similarity=0.203  Sum_probs=62.0

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCC---eEEEEecCCchhhccCCCC----CCccCC----Ceee--------cCCcch
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNH---QVRVLTRSRSKAELIFPGK----KTRFFP----GVMI--------AEEPQW  110 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~~~~~~~----~~~~~~----~~d~--------~~~~~~  110 (355)
                      +.||.|+| -|.-|..++..|.+.|.   +.++++-+...........    ......    +.|.        .+.+.+
T Consensus        15 ~~ki~ViG-vGGaG~n~v~~l~~~~~~~v~~iainTD~~~L~~~~~~~ki~ig~~~t~g~Gag~~p~~g~~aa~e~~~~I   93 (209)
T d2vapa1          15 KAKITVVG-CGGAGNNTITRLKMEGIEGAKTVAINTDAQQLIRTKADKKILIGKKLTRGLGAGGNPKIGEEAAKESAEEI   93 (209)
T ss_dssp             CCCEEEEE-EHHHHHHHHHHHHHHTCTTEEEEEEESBHHHHHTSCCSEEEECCTTTTTTBCCTTCHHHHHHHHHHTHHHH
T ss_pred             CCcEEEEE-eCChHHHHHHHHHHcCCCceEEEEEeCCHHHHhcCCcchhcccccccccccccccchHHHHHHHHHHHHHH
Confidence            36899999 79999999999999763   5566665543333221100    000000    0010        144577


Q ss_pred             hhhcCCCcEEEECCCCCCCCCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEe
Q 018503          111 RDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVS  169 (355)
Q Consensus       111 ~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~S  169 (355)
                      .+.++++|.||-+||....             +-..++-.+.+.+++  .+...+-+++
T Consensus        94 ~~~l~~~d~vfi~AGlGGG-------------TGsgaapvia~~ake--~g~lvv~ivt  137 (209)
T d2vapa1          94 KAAIQDSDMVFITCGLGGG-------------TGTGSAPVVAEISKK--IGALTVAVVT  137 (209)
T ss_dssp             HHHHTTCSEEEEEEETTSS-------------HHHHHHHHHHHHHHH--TTCEEEEEEE
T ss_pred             HHhccCCCEEEEEEeCCCC-------------ccccHHHHHHHHHHH--cCCcEEEEEe
Confidence            8888999999999997533             122334456788888  4554343333

>d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: p-Hydroxybenzoate hydroxylase, PHBH
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=92.42  E-value=0.045  Score=44.61  Aligned_cols=35  Identities=26%  Similarity=0.287  Sum_probs=31.7

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCch
Q 018503           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSK   86 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~   86 (355)
                      .+|+|+| .|..|..++..|.+.|++|.++.|+++.
T Consensus         3 ~~V~IvG-aGp~Gl~~A~~L~~~G~~v~vlE~~~~~   37 (292)
T d1k0ia1           3 TQVAIIG-AGPSGLLLGQLLHKAGIDNVILERQTPD   37 (292)
T ss_dssp             CSEEEEC-CSHHHHHHHHHHHHHTCCEEEECSSCHH
T ss_pred             CCEEEEC-cCHHHHHHHHHHHHCCCCEEEEeCCCCC
Confidence            4799999 5999999999999999999999998754

>d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=92.30  E-value=0.073  Score=38.73  Aligned_cols=34  Identities=12%  Similarity=0.291  Sum_probs=30.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecC
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRS   83 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~   83 (355)
                      ..++|||+|| |.+|..-++.|++.|.+|++++-.
T Consensus        12 ~gkrvLViGg-G~va~~ka~~Ll~~GA~VtVvap~   45 (150)
T d1kyqa1          12 KDKRILLIGG-GEVGLTRLYKLMPTGCKLTLVSPD   45 (150)
T ss_dssp             TTCEEEEEEE-SHHHHHHHHHHGGGTCEEEEEEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCC
Confidence            4579999995 999999999999999999999653

>d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, C-terminal domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=92.21  E-value=0.1  Score=38.10  Aligned_cols=35  Identities=20%  Similarity=0.354  Sum_probs=29.5

Q ss_pred             CEEEEE-cCCchHHHHHHHHHHhCCCeEEEEecCCc
Q 018503           51 MTVSVT-GATGFIGRRLVQRLQADNHQVRVLTRSRS   85 (355)
Q Consensus        51 ~~IlVt-GatG~iG~~l~~~L~~~g~~V~~~~r~~~   85 (355)
                      .+++|. .+.||+|..+++.|.+.|++|+.+.+.+.
T Consensus        40 ~~vvi~d~ggg~ig~e~A~~la~~G~~Vtlv~~~~~   75 (156)
T d1djqa2          40 KRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVHL   75 (156)
T ss_dssp             SEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSCT
T ss_pred             CceEEEecCCChHHHHHHHHHHHcCCeEEEEecCCc
Confidence            456665 34699999999999999999999999764

>d1yovb1 c.111.1.2 (B:12-437) UBA3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: UBA3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.18  E-value=0.38  Score=41.36  Aligned_cols=33  Identities=30%  Similarity=0.440  Sum_probs=28.9

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhCCC-eEEEEecCC
Q 018503           51 MTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSR   84 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~   84 (355)
                      +||||+|+ |.+|.++++.|...|. +++.++.+.
T Consensus        38 ~kVlvvG~-GglG~ei~k~L~~~Gvg~i~lvD~D~   71 (426)
T d1yovb1          38 CKVLVIGA-GGLGCELLKNLALSGFRQIHVIDMDT   71 (426)
T ss_dssp             CCEEEECS-STTHHHHHHHHHTTTCCCEEEECCCB
T ss_pred             CeEEEECC-CHHHHHHHHHHHHcCCCeEEEEECCC
Confidence            58999995 7799999999999996 888888764

>d1ydwa1 c.2.1.3 (A:6-133,A:305-360) Probable oxidoreductase At4g09670 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Probable oxidoreductase At4g09670
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=92.13  E-value=0.039  Score=41.84  Aligned_cols=69  Identities=16%  Similarity=0.233  Sum_probs=42.7

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhC-CCeEEEE-ecCCchhhccCCCCCCccCCCeeecCCcchhhhc--CCCcEEEECC
Q 018503           51 MTVSVTGATGFIGRRLVQRLQAD-NHQVRVL-TRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCI--QGSTAVVNLA  124 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~-g~~V~~~-~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~--~~~d~vi~~a  124 (355)
                      +||.|+| +|.+|+..++.|... +.+|+++ ++++++.........  ......+  .+++++++  .++|+|+-+.
T Consensus         2 iki~iIG-~G~~g~~~~~~l~~~~~~~i~ai~d~~~~~~~~~~~~~~--~~~~~~~--~~~~~~ll~~~~iD~v~I~t   74 (184)
T d1ydwa1           2 IRIGVMG-CADIARKVSRAIHLAPNATISGVASRSLEKAKAFATANN--YPESTKI--HGSYESLLEDPEIDALYVPL   74 (184)
T ss_dssp             EEEEEES-CCTTHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHHTT--CCTTCEE--ESSHHHHHHCTTCCEEEECC
T ss_pred             eEEEEEc-CCHHHHHHHHHHHhCCCCEEEEEEeCCccccccchhccc--cccceee--cCcHHHhhhccccceeeecc
Confidence            6899999 799999999999886 6788875 555554433221110  0111122  23455555  3689998764

>d3c96a1 c.3.1.2 (A:4-182,A:294-402) Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Monooxygenase PhzS
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=92.01  E-value=0.11  Score=41.73  Aligned_cols=35  Identities=20%  Similarity=0.325  Sum_probs=31.1

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCC-CeEEEEecCCc
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADN-HQVRVLTRSRS   85 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~   85 (355)
                      +++|+|+| .|..|..++..|.+.| ++|.++.|++.
T Consensus         1 ~~~V~IvG-aG~aGl~~A~~L~~~Gi~~V~V~Er~~~   36 (288)
T d3c96a1           1 PIDILIAG-AGIGGLSCALALHQAGIGKVTLLESSSE   36 (288)
T ss_dssp             CCEEEEEC-CSHHHHHHHHHHHHTTCSEEEEEESSSS
T ss_pred             CCEEEEEC-cCHHHHHHHHHHHhCCCCeEEEEeCCCC
Confidence            37899999 6999999999999999 58999998764

>d1i8ta1 c.4.1.3 (A:1-244,A:314-367) UDP-galactopyranose mutase, N-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=91.99  E-value=0.065  Score=44.03  Aligned_cols=34  Identities=21%  Similarity=0.377  Sum_probs=30.8

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCc
Q 018503           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRS   85 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~   85 (355)
                      ..|+|+| +|..|..++..|.+.|++|.++.+++.
T Consensus         2 ~dv~IIG-aG~sGl~~A~~L~~~g~~V~iiEk~~~   35 (298)
T d1i8ta1           2 YDYIIVG-SGLFGAVCANELKKLNKKVLVIEKRNH   35 (298)
T ss_dssp             EEEEEEC-CSHHHHHHHHHHGGGTCCEEEECSSSS
T ss_pred             ccEEEEC-CcHHHHHHHHHHHhCCCcEEEEECCCC
Confidence            3699999 799999999999999999999998764

>d1lc0a1 c.2.1.3 (A:2-128,A:247-291) Biliverdin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Biliverdin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=91.69  E-value=0.085  Score=39.32  Aligned_cols=26  Identities=23%  Similarity=0.373  Sum_probs=21.2

Q ss_pred             cCCCCEEEEEcCCchHHHHHHHHHHhC
Q 018503           47 KASQMTVSVTGATGFIGRRLVQRLQAD   73 (355)
Q Consensus        47 ~~~~~~IlVtGatG~iG~~l~~~L~~~   73 (355)
                      ...+++|+|+| +|.+|+..++.|.+.
T Consensus         4 ~~~k~kv~iIG-~G~~g~~h~~~l~~~   29 (172)
T d1lc0a1           4 NSGKFGVVVVG-VGRAGSVRLRDLKDP   29 (172)
T ss_dssp             CCCSEEEEEEC-CSHHHHHHHHHHTSH
T ss_pred             CCCCcEEEEEc-CCHHHHHHHHHHHhC
Confidence            34557999999 699999999888764

>d1kifa1 c.4.1.2 (A:1-194,A:288-339) D-aminoacid oxidase, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=91.65  E-value=0.013  Score=46.38  Aligned_cols=27  Identities=33%  Similarity=0.447  Sum_probs=24.2

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhCCCeEE
Q 018503           51 MTVSVTGATGFIGRRLVQRLQADNHQVR   78 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~g~~V~   78 (355)
                      |||+|+| +|.+|...+.+|+++|++|+
T Consensus         1 mkV~VIG-aGi~GlstA~~L~~~G~~v~   27 (246)
T d1kifa1           1 MRVVVIG-AGVIGLSTALCIHERYHSVL   27 (246)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHHHTTTS
T ss_pred             CEEEEEC-chHHHHHHHHHHHHCCCCce
Confidence            7899999 69999999999999997543

>d1xeaa1 c.2.1.3 (A:2-122,A:267-312) Putative oxidoreductase VCA1048 {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Putative oxidoreductase VCA1048
species: Vibrio cholerae [TaxId: 666]

Probab=91.44  E-value=0.093  Score=38.86  Aligned_cols=67  Identities=15%  Similarity=0.159  Sum_probs=40.4

Q ss_pred             CEEEEEcCCchHHHH-HHHHHHhC-CCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcCCCcEEEECC
Q 018503           51 MTVSVTGATGFIGRR-LVQRLQAD-NHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLA  124 (355)
Q Consensus        51 ~~IlVtGatG~iG~~-l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a  124 (355)
                      |||.|+| +|.+|+. .+..|.+. +.++.+++++++..........   ... -+.|.+++-+  .++|+|+-+.
T Consensus         2 irvgiiG-~G~~~~~~~~~~l~~~~~~~~~~~d~~~~~~~~~~~~~~---~~~-~~~~~~~ll~--~~iD~V~I~t   70 (167)
T d1xeaa1           2 LKIAMIG-LGDIAQKAYLPVLAQWPDIELVLCTRNPKVLGTLATRYR---VSA-TCTDYRDVLQ--YGVDAVMIHA   70 (167)
T ss_dssp             EEEEEEC-CCHHHHHTHHHHHTTSTTEEEEEECSCHHHHHHHHHHTT---CCC-CCSSTTGGGG--GCCSEEEECS
T ss_pred             eEEEEEc-CCHHHHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHhcc---ccc-ccccHHHhcc--cccceecccc
Confidence            6899999 6888865 56677665 5688878877766554432211   111 1223333322  3789988764

>d1q1ra1 c.3.1.5 (A:2-114,A:248-319) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=91.26  E-value=0.11  Score=38.86  Aligned_cols=35  Identities=20%  Similarity=0.282  Sum_probs=29.4

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCc
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRS   85 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~   85 (355)
                      .++|+|+| +|++|-.++..|.+.|.+|.++.+...
T Consensus         3 ~~~VvIIG-gG~~G~e~A~~l~~~g~~v~v~~~~~~   37 (185)
T d1q1ra1           3 NDNVVIVG-TGLAGVEVAFGLRASGWEGNIRLVGDA   37 (185)
T ss_dssp             SCEEEEEC-CSHHHHHHHHHHHHTTCCSEEEEECSC
T ss_pred             CCCEEEEC-CcHHHHHHHHHHHHcCCceEEEEecCc
Confidence            46899999 799999999999999988777665543

>d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: GDI-like N domain
domain: Guanine nucleotide dissociation inhibitor, GDI
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=91.20  E-value=0.11  Score=40.88  Aligned_cols=33  Identities=27%  Similarity=0.306  Sum_probs=30.3

Q ss_pred             EEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCc
Q 018503           52 TVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRS   85 (355)
Q Consensus        52 ~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~   85 (355)
                      -|+|+| +|..|...+..|.++|++|.++.+++.
T Consensus         7 DviViG-aG~~Gl~~A~~La~~G~~V~vlE~~~~   39 (297)
T d2bcgg1           7 DVIVLG-TGITECILSGLLSVDGKKVLHIDKQDH   39 (297)
T ss_dssp             SEEEEC-CSHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred             CEEEEC-cCHHHHHHHHHHHHCCCCEEEEcCCCC
Confidence            389999 899999999999999999999999864

>d2bw0a2 c.65.1.1 (A:1-203) 10-formyltetrahydrofolate dehydrogenase domain 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Formyltransferase
superfamily: Formyltransferase
family: Formyltransferase
domain: 10-formyltetrahydrofolate dehydrogenase domain 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.99  E-value=0.14  Score=39.29  Aligned_cols=32  Identities=22%  Similarity=0.430  Sum_probs=28.2

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhCCCeEEEEecC
Q 018503           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRS   83 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~   83 (355)
                      |||+++| ++..|..+.+.|++.||+|.++.-.
T Consensus         1 MkI~~~G-~~~~~~~~l~~L~~~~~~i~~V~t~   32 (203)
T d2bw0a2           1 MKIAVIG-QSLFGQEVYCHLRKEGHEVVGVFTV   32 (203)
T ss_dssp             CEEEEEC-CHHHHHHHHHHHHHTTCEEEEEEEC
T ss_pred             CEEEEEc-CCHHHHHHHHHHHHCCCcEEEEEcC
Confidence            7999998 7889999999999999999977643

>d1h6da1 c.2.1.3 (A:51-212,A:375-433) Glucose-fructose oxidoreductase, N-terminal domain {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glucose-fructose oxidoreductase, N-terminal domain
species: Zymomonas mobilis [TaxId: 542]

Probab=90.90  E-value=0.088  Score=41.11  Aligned_cols=71  Identities=11%  Similarity=0.149  Sum_probs=42.8

Q ss_pred             CEEEEEcCCchHHH-HHHHHHHhC-CCeEEEE-ecCCchhhccCCCCCCccCCCeeecCCcchhhhcC--CCcEEEECCC
Q 018503           51 MTVSVTGATGFIGR-RLVQRLQAD-NHQVRVL-TRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ--GSTAVVNLAG  125 (355)
Q Consensus        51 ~~IlVtGatG~iG~-~l~~~L~~~-g~~V~~~-~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--~~d~vi~~a~  125 (355)
                      -||.|+| +|.+|+ ++++.+... +.+|+++ +|++++.........   .....+...++++++++  ++|+|+-+..
T Consensus        34 iriaiIG-~G~~~~~~~~~~~~~~~~~~ivav~d~~~~~a~~~~~~~~---i~~~~~~~~~d~~ell~~~~iD~V~I~tp  109 (221)
T d1h6da1          34 FGYAIVG-LGKYALNQILPGFAGCQHSRIEALVSGNAEKAKIVAAEYG---VDPRKIYDYSNFDKIAKDPKIDAVYIILP  109 (221)
T ss_dssp             EEEEEEC-CSHHHHHTHHHHTTTCSSEEEEEEECSCHHHHHHHHHHTT---CCGGGEECSSSGGGGGGCTTCCEEEECSC
T ss_pred             EEEEEEc-CcHHHHHHHHHHHHhCCCceEEEEecCCHHHHHHHHHhhc---cccccccccCchhhhcccccceeeeeccc
Confidence            4899999 799996 677777665 6788865 566555443322111   11112223345666664  6899987653

>d1fmta2 c.65.1.1 (A:1-206) Methionyl-tRNAfmet formyltransferase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Formyltransferase
superfamily: Formyltransferase
family: Formyltransferase
domain: Methionyl-tRNAfmet formyltransferase
species: Escherichia coli [TaxId: 562]

Probab=90.81  E-value=0.2  Score=38.44  Aligned_cols=35  Identities=17%  Similarity=0.208  Sum_probs=29.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCC
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSR   84 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~   84 (355)
                      .+|||+++| ++..+..+.+.|++.|++|.++.-.+
T Consensus         2 ~~mKI~f~G-~~~~~~~~L~~L~~~~~~i~~Vit~~   36 (206)
T d1fmta2           2 ESLRIIFAG-TPDFAARHLDALLSSGHNVVGVFTQP   36 (206)
T ss_dssp             CCCEEEEEE-CSHHHHHHHHHHHHTTCEEEEEECCC
T ss_pred             CCcEEEEEC-CCHHHHHHHHHHHhCCCCEEEEEeCC
Confidence            358999998 68899999999999999988766443

>d1aoga2 c.3.1.5 (A:170-286) Trypanothione reductase {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Trypanosoma cruzi [TaxId: 5693]

Probab=90.80  E-value=0.18  Score=34.77  Aligned_cols=35  Identities=26%  Similarity=0.346  Sum_probs=28.0

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHh---CCCeEEEEecCCc
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQA---DNHQVRVLTRSRS   85 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~---~g~~V~~~~r~~~   85 (355)
                      +++++|.|| |++|-.++..|.+   +|.+|+.+.|.+.
T Consensus        20 p~~v~ivGg-G~ig~E~A~~l~~l~~~~~~Vtli~~~~~   57 (117)
T d1aoga2          20 PRRVLTVGG-GFISVEFAGIFNAYKPKDGQVTLCYRGEM   57 (117)
T ss_dssp             CSEEEEECS-SHHHHHHHHHHHHHCCTTCEEEEEESSSS
T ss_pred             CCeEEEECC-cHHHHHHHHHhhhcccCCcEEEEEeccch
Confidence            368999994 9999999976654   4678999988653

>d1p9oa_ c.72.3.1 (A:) Phosphopantothenoylcysteine synthetase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Phosphopantothenoylcysteine synthetase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.70  E-value=0.12  Score=42.12  Aligned_cols=35  Identities=23%  Similarity=0.155  Sum_probs=30.4

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCc
Q 018503           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRS   85 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~   85 (355)
                      =|.+=--+||..|.+|++.++.+|++|+.+.+..+
T Consensus        37 VR~ItN~SSGk~G~alA~~~~~~Ga~V~li~g~~s   71 (290)
T d1p9oa_          37 VRFLDNFSSGRRGATSAEAFLAAGYGVLFLYRARS   71 (290)
T ss_dssp             SEEEEECCCCHHHHHHHHHHHHTTCEEEEEEETTS
T ss_pred             ceEeCCCCchHHHHHHHHHHHHcCCEEEEEecCCc
Confidence            46777778999999999999999999999987643

>d1gtma1 c.2.1.7 (A:181-419) Glutamate dehydrogenase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=90.30  E-value=0.54  Score=36.82  Aligned_cols=35  Identities=20%  Similarity=0.283  Sum_probs=29.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHh-CCCeEEEEecCC
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQA-DNHQVRVLTRSR   84 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~-~g~~V~~~~r~~   84 (355)
                      ..++|+|-| -|.+|+++++.|.+ .|..|++++-+.
T Consensus        31 ~g~~v~IqG-fGnVG~~~a~~L~~~~G~kvv~vsD~~   66 (239)
T d1gtma1          31 KGKTIAIQG-YGNAGYYLAKIMSEDFGMKVVAVSDSK   66 (239)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCCEEEEEECSS
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHhcCcceeeccccc
Confidence            457999999 79999999999986 499999887654

>d1d7ya1 c.3.1.5 (A:5-115,A:237-308) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=90.23  E-value=0.068  Score=40.20  Aligned_cols=33  Identities=21%  Similarity=0.252  Sum_probs=26.7

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecC
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRS   83 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~   83 (355)
                      +.+|+|+| +|++|-.++..|.+.|+++.++.++
T Consensus         3 ~a~VvIIG-gG~~G~e~A~~l~~~g~~v~i~~~~   35 (183)
T d1d7ya1           3 KAPVVVLG-AGLASVSFVAELRQAGYQGLITVVG   35 (183)
T ss_dssp             CSSEEEEC-CSHHHHHHHHHHHHHTCCSCEEEEE
T ss_pred             CCCEEEEC-ccHHHHHHHHHHHhcCCceEEEEEe
Confidence            34699999 7999999999999988766555543

>d2dw4a2 c.3.1.2 (A:274-654,A:764-831) Lysine-specific histone demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Lysine-specific histone demethylase 1, LSD1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.10  E-value=0.22  Score=41.16  Aligned_cols=35  Identities=23%  Similarity=0.290  Sum_probs=31.2

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCc
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRS   85 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~   85 (355)
                      ..||+|+| +|.-|-.-+..|.+.|++|+++-.+..
T Consensus         5 ~~kViVIG-aG~aGL~aA~~L~~~G~~V~VlEa~~r   39 (449)
T d2dw4a2           5 TGKVIIIG-SGVSGLAAARQLQSFGMDVTLLEARDR   39 (449)
T ss_dssp             CCEEEEEC-CBHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             CCcEEEEC-CCHHHHHHHHHHHhCCCCEEEEeCCCC
Confidence            35899999 799999999999999999999987654

>d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: N,N-dimethylglycine oxidase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=90.09  E-value=0.14  Score=41.80  Aligned_cols=32  Identities=22%  Similarity=0.509  Sum_probs=29.0

Q ss_pred             EEEEEcCCchHHHHHHHHHHhCCC-eEEEEecCC
Q 018503           52 TVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSR   84 (355)
Q Consensus        52 ~IlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~   84 (355)
                      +|+|+| +|.+|..++.+|.++|+ +|+++.|+.
T Consensus         3 dViIIG-aGi~G~s~A~~La~~G~~~V~liE~~~   35 (305)
T d1pj5a2           3 RIVIIG-AGIVGTNLADELVTRGWNNITVLDQGP   35 (305)
T ss_dssp             CEEEEC-CSHHHHHHHHHHHHTTCCCEEEECSSC
T ss_pred             CEEEEC-cCHHHHHHHHHHHHcCCCcEEEEeCCC
Confidence            699999 69999999999999995 799999874

>d1feca2 c.3.1.5 (A:170-286) Trypanothione reductase {Crithidia fasciculata [TaxId: 5656]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Crithidia fasciculata [TaxId: 5656]

Probab=90.02  E-value=0.23  Score=34.11  Aligned_cols=35  Identities=20%  Similarity=0.251  Sum_probs=29.0

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHh---CCCeEEEEecCCc
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQA---DNHQVRVLTRSRS   85 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~---~g~~V~~~~r~~~   85 (355)
                      +++++|+| .|++|-.++..|.+   .|.+|+.+.|++.
T Consensus        18 p~~v~IiG-gG~ig~E~A~~l~~~~~~g~~Vtli~~~~~   55 (117)
T d1feca2          18 PKRALCVG-GGYISIEFAGIFNAYKARGGQVDLAYRGDM   55 (117)
T ss_dssp             CSEEEEEC-SSHHHHHHHHHHHHHSCTTCEEEEEESSSS
T ss_pred             CCeEEEEC-CChHHHHHHHHhHhhcccccccceeccccc
Confidence            36899999 69999999986654   4889999998764

>d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus sp., strain b0618 [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Sarcosine oxidase
species: Bacillus sp., strain b0618 [TaxId: 1409]

Probab=89.96  E-value=0.15  Score=40.94  Aligned_cols=32  Identities=19%  Similarity=0.210  Sum_probs=29.3

Q ss_pred             EEEEEcCCchHHHHHHHHHHhCCCeEEEEecCC
Q 018503           52 TVSVTGATGFIGRRLVQRLQADNHQVRVLTRSR   84 (355)
Q Consensus        52 ~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~   84 (355)
                      -|+|+| +|..|..++.+|.++|++|+++.+..
T Consensus         5 DvvIIG-aGi~Gls~A~~La~~G~~V~viE~~~   36 (281)
T d2gf3a1           5 DVIVVG-AGSMGMAAGYQLAKQGVKTLLVDAFD   36 (281)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHTTCCEEEECSSC
T ss_pred             CEEEEC-cCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence            389999 69999999999999999999999864

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=89.81  E-value=0.2  Score=37.80  Aligned_cols=37  Identities=19%  Similarity=0.148  Sum_probs=31.4

Q ss_pred             CEEEE-EcCCchHHHHHHHHHHhCCCeEEEEecCCchh
Q 018503           51 MTVSV-TGATGFIGRRLVQRLQADNHQVRVLTRSRSKA   87 (355)
Q Consensus        51 ~~IlV-tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~   87 (355)
                      .+++| .||+|.+|...++.....|.+|++++|+.+..
T Consensus        30 ~~vli~~ga~g~vG~~aiqlAk~~Ga~vI~~v~~~~~~   67 (189)
T d1gu7a2          30 KDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNL   67 (189)
T ss_dssp             TCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTH
T ss_pred             CEEEEEeCCCchHHHHHHHHHhhcCCeEEEEEeccccc
Confidence            35676 58999999999999988999999999887654

>d2blna2 c.65.1.1 (A:1-203) Polymyxin resistance protein ArnA, N-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Formyltransferase
superfamily: Formyltransferase
family: Formyltransferase
domain: Polymyxin resistance protein ArnA, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=89.44  E-value=0.23  Score=37.98  Aligned_cols=33  Identities=15%  Similarity=0.095  Sum_probs=27.7

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCC
Q 018503           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSR   84 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~   84 (355)
                      |||+|+| ++-.|..+++.|++.|++|.++.-.+
T Consensus         1 Mkiv~~~-~~~~g~~~l~~L~~~g~~I~~Vvt~~   33 (203)
T d2blna2           1 MKTVVFA-YHDMGCLGIEALLAAGYEISAIFTHT   33 (203)
T ss_dssp             CEEEEEE-CHHHHHHHHHHHHHTTCEEEEEECCC
T ss_pred             CeEEEEe-cCHHHHHHHHHHHHCCCCEEEEEcCC
Confidence            7899997 56689999999999999998766433

>d1yova1 c.111.1.2 (A:6-534) Amyloid beta precursor protein-binding protein 1, APPBP1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: Amyloid beta precursor protein-binding protein 1, APPBP1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.19  E-value=0.72  Score=40.82  Aligned_cols=33  Identities=12%  Similarity=0.223  Sum_probs=28.0

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhCCC-eEEEEecCC
Q 018503           51 MTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSR   84 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~   84 (355)
                      .+|+|+|+ |.+|..+++.|...|. .++.++.+.
T Consensus        26 s~VlvvG~-gglG~Ei~knLvl~GVg~itivD~d~   59 (529)
T d1yova1          26 AHVCLINA-TATGTEILKNLVLPGIGSFTIIDGNQ   59 (529)
T ss_dssp             CEEEECCC-SHHHHHHHHHHHTTTCSEEEEECCSB
T ss_pred             CCEEEECC-CHHHHHHHHHHHHhcCCEEEEEcCCc
Confidence            58999995 7899999999999995 788877653

>d1xhca1 c.3.1.5 (A:1-103,A:226-289) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=89.14  E-value=0.22  Score=36.45  Aligned_cols=31  Identities=26%  Similarity=0.414  Sum_probs=27.0

Q ss_pred             EEEEEcCCchHHHHHHHHHHhCCCeEEEEecCC
Q 018503           52 TVSVTGATGFIGRRLVQRLQADNHQVRVLTRSR   84 (355)
Q Consensus        52 ~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~   84 (355)
                      ||+|+| .|++|-.++..|. ++.+|+++.+.+
T Consensus         2 rVvIIG-gG~~G~e~A~~l~-~~~~Vtvv~~~~   32 (167)
T d1xhca1           2 KVVIVG-NGPGGFELAKQLS-QTYEVTVIDKEP   32 (167)
T ss_dssp             EEEEEC-CSHHHHHHHHHHT-TTSEEEEECSSS
T ss_pred             eEEEEC-CcHHHHHHHHHHH-cCCCEEEEeccc
Confidence            799999 6999999999985 478999998754

>d1v9la1 c.2.1.7 (A:180-421) Glutamate dehydrogenase {Pyrobaculum islandicum [TaxId: 2277]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Pyrobaculum islandicum [TaxId: 2277]

Probab=88.66  E-value=0.35  Score=38.07  Aligned_cols=35  Identities=23%  Similarity=0.304  Sum_probs=31.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCC
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSR   84 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~   84 (355)
                      ..++|+|-| -|.+|+++++.|.+.|.+|++++...
T Consensus        30 ~g~~v~IqG-fGnVG~~~a~~L~~~Gakvv~vsD~~   64 (242)
T d1v9la1          30 EGKTVAIQG-MGNVGRWTAYWLEKMGAKVIAVSDIN   64 (242)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEEECSS
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEeeccc
Confidence            457999998 89999999999999999999888654

>d1zh8a1 c.2.1.3 (A:4-131,A:276-328) Hypothetical protein TM0312 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM0312
species: Thermotoga maritima [TaxId: 2336]

Probab=88.38  E-value=0.18  Score=37.77  Aligned_cols=68  Identities=16%  Similarity=0.224  Sum_probs=40.7

Q ss_pred             CCCEEEEEcCCchHHHH-HHHHHHhCC--CeEEEE-ecCCchhhccCCCCCCccCCCeeecCCcchhhhcC--CCcEEEE
Q 018503           49 SQMTVSVTGATGFIGRR-LVQRLQADN--HQVRVL-TRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ--GSTAVVN  122 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~-l~~~L~~~g--~~V~~~-~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--~~d~vi~  122 (355)
                      +++||.|+| +|.+|+. .++.+.+.+  .+|+++ +++++........     +....+  .++++++++  ++|+|+-
T Consensus         2 kkirigiIG-~G~~g~~~h~~~l~~~~~~~~i~~v~d~~~~~~~~~~~~-----~~~~~~--~~~~~ell~~~~id~v~I   73 (181)
T d1zh8a1           2 RKIRLGIVG-CGIAARELHLPALKNLSHLFEITAVTSRTRSHAEEFAKM-----VGNPAV--FDSYEELLESGLVDAVDL   73 (181)
T ss_dssp             CCEEEEEEC-CSHHHHHTHHHHHHTTTTTEEEEEEECSSHHHHHHHHHH-----HSSCEE--ESCHHHHHHSSCCSEEEE
T ss_pred             CCcEEEEEc-CCHHHHHHHHHHHHhCCCCeEEEEEEeccHhhhhhhhcc-----ccccce--eeeeeccccccccceeec
Confidence            456999999 7999986 477777643  577765 4555444332221     111111  245566664  6899987


Q ss_pred             CC
Q 018503          123 LA  124 (355)
Q Consensus       123 ~a  124 (355)
                      +.
T Consensus        74 ~t   75 (181)
T d1zh8a1          74 TL   75 (181)
T ss_dssp             CC
T ss_pred             cc
Confidence            64

>d1b26a1 c.2.1.7 (A:179-412) Glutamate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=88.32  E-value=0.73  Score=35.88  Aligned_cols=35  Identities=26%  Similarity=0.327  Sum_probs=29.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHh-CCCeEEEEecCC
Q 018503           49 SQMTVSVTGATGFIGRRLVQRLQA-DNHQVRVLTRSR   84 (355)
Q Consensus        49 ~~~~IlVtGatG~iG~~l~~~L~~-~g~~V~~~~r~~   84 (355)
                      ..++|+|-| .|.+|+++++.|.+ .|..|++++-+.
T Consensus        30 ~g~~vaIqG-~GnVG~~~a~~L~~e~Ga~vv~vsd~~   65 (234)
T d1b26a1          30 KKATVAVQG-FGNVGQFAALLISQELGSKVVAVSDSR   65 (234)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHHHCCEEEEEEETT
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHhcCCceEEeecCC
Confidence            457999998 89999999999975 599999887543

>d1ofua1 c.32.1.1 (A:11-208) Cell-division protein FtsZ {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: Tubulin nucleotide-binding domain-like
superfamily: Tubulin nucleotide-binding domain-like
family: Tubulin, GTPase domain
domain: Cell-division protein FtsZ
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=88.04  E-value=1.6  Score=32.76  Aligned_cols=96  Identities=15%  Similarity=0.194  Sum_probs=58.8

Q ss_pred             EEEEEcCCchHHHHHHHHHHhCC---CeEEEEecCCchhhccCCCCC----C----ccCCCeee--------cCCcchhh
Q 018503           52 TVSVTGATGFIGRRLVQRLQADN---HQVRVLTRSRSKAELIFPGKK----T----RFFPGVMI--------AEEPQWRD  112 (355)
Q Consensus        52 ~IlVtGatG~iG~~l~~~L~~~g---~~V~~~~r~~~~~~~~~~~~~----~----~~~~~~d~--------~~~~~~~~  112 (355)
                      +|.|+| -|..|..++..|.+.+   .+.++++-+............    .    ..-...|.        .+.+.+.+
T Consensus         3 ~IkViG-vGGaG~n~v~~~~~~~~~~v~~iainTD~~~L~~~~~~~ki~iG~~~~~g~G~gg~p~~g~~aa~e~~~~I~~   81 (198)
T d1ofua1           3 VIKVIG-VGGGGGNAVNHMAKNNVEGVEFICANTDAQALKNIAARTVLQLGPGVTKGLGAGANPEVGRQAALEDRERISE   81 (198)
T ss_dssp             CEEEEE-EHHHHHHHHHHHHHTTCCSEEEEEEESBTGGGSSCSCSEEEECCHHHHTTBCCCSCHHHHHHHHHHTHHHHHH
T ss_pred             eEEEEE-ECchHHHHHHHHHHcCCCCeEEEEEeCcHHHHhcCCccceeccccccccCCCCCCChHHHHHHHHHHHHHHHH
Confidence            588888 7999999999999986   467777665544332111000    0    00001111        14557788


Q ss_pred             hcCCCcEEEECCCCCCCCCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCC
Q 018503          113 CIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVR  163 (355)
Q Consensus       113 ~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~  163 (355)
                      .+++.|.||-+||....             +-..++-.+.+.+++  .+.-
T Consensus        82 ~l~~~d~vfi~AGlGGG-------------TGtgaapviA~~ake--~g~l  117 (198)
T d1ofua1          82 VLEGADMVFITTGMGGG-------------TGTGAAPIIAEVAKE--MGIL  117 (198)
T ss_dssp             HHTTCSEEEEEEETTSS-------------HHHHHHHHHHHHHHH--TTCE
T ss_pred             HhCCCCeEEEEecCCCC-------------ccccHHHHHHHHHHH--cCCC
Confidence            88999999999998543             122334456788888  4543

>d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Glycosyl transferases group 1
domain: Glycogen synthase 1, GlgA
species: Pyrococcus abyssi [TaxId: 29292]

Probab=87.89  E-value=0.17  Score=43.32  Aligned_cols=32  Identities=28%  Similarity=0.361  Sum_probs=24.5

Q ss_pred             CEEEEEcC------CchHH---HHHHHHHHhCCCeEEEEec
Q 018503           51 MTVSVTGA------TGFIG---RRLVQRLQADNHQVRVLTR   82 (355)
Q Consensus        51 ~~IlVtGa------tG~iG---~~l~~~L~~~g~~V~~~~r   82 (355)
                      ||||+++.      +|.+|   .+|++.|.+.||+|++++.
T Consensus         1 MkIl~~~~~~pP~~~GG~~~~~~~La~~L~~~Gh~V~Vvtp   41 (437)
T d2bisa1           1 MKVLLLGFEFLPVKVGGLAEALTAISEALASLGHEVLVFTP   41 (437)
T ss_dssp             CEEEEECSCCTTCCSSSHHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred             CEEEEECCccCCcccCCHHHHHHHHHHHHHHcCCEEEEEec
Confidence            67888653      34444   6779999999999999874

>d1x7da_ c.2.1.13 (A:) Ornithine cyclodeaminase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Ornithine cyclodeaminase-like
domain: Ornithine cyclodeaminase
species: Pseudomonas putida [TaxId: 303]

Probab=87.79  E-value=0.33  Score=40.30  Aligned_cols=73  Identities=8%  Similarity=0.179  Sum_probs=54.3

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHh-CC-CeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcCCCcEEEECCC
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQA-DN-HQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG  125 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~-~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~  125 (355)
                      ..++.|+| +|..+..-++.+.+ .+ .+|++.+|++++...+.....  ...++++.-.++++++++++|+|+-+.+
T Consensus       128 a~~l~iiG-~G~QA~~~~~a~~~v~~i~~V~v~~r~~~~~~~~~~~l~--~~~g~~v~~~~s~~eav~~ADIi~t~Ta  202 (340)
T d1x7da_         128 ARKMALIG-NGAQSEFQALAFHKHLGIEEIVAYDTDPLATAKLIANLK--EYSGLTIRRASSVAEAVKGVDIITTVTA  202 (340)
T ss_dssp             CCEEEEEC-CSTTHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHT--TCTTCEEEECSSHHHHHTTCSEEEECCC
T ss_pred             CceEEEEc-ccHHHHHHHHHHhhhcceeeeEEEecChHHHHHHHHhhh--hccCCCceecCCHHHHHhcCCceeeccc
Confidence            36899999 89999999998876 35 589999999876554422110  0334667677889999999999998765

>d1b5qa1 c.3.1.2 (A:5-293,A:406-463) Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Polyamine oxidase
species: Maize (Zea mays) [TaxId: 4577]

Probab=87.66  E-value=0.27  Score=38.76  Aligned_cols=33  Identities=24%  Similarity=0.380  Sum_probs=29.7

Q ss_pred             EEEEEcCCchHHHHHHHHHHhCCC-eEEEEecCCc
Q 018503           52 TVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRS   85 (355)
Q Consensus        52 ~IlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~   85 (355)
                      +|+|+| +|..|-..+..|.+.|+ +|+++.+++.
T Consensus         2 ~V~IIG-aG~aGL~aA~~L~~~G~~~V~vlE~~~~   35 (347)
T d1b5qa1           2 RVIVVG-AGMSGISAAKRLSEAGITDLLILEATDH   35 (347)
T ss_dssp             CEEEEC-CBHHHHHHHHHHHHTTCCCEEEECSSSS
T ss_pred             CEEEEC-CcHHHHHHHHHHHhCCCCcEEEEECCCC
Confidence            699999 69999999999999995 7999998754

>d1m6ia2 c.3.1.5 (A:264-400) Apoptosis-inducing factor (AIF) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Apoptosis-inducing factor (AIF)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.53  E-value=0.45  Score=33.63  Aligned_cols=36  Identities=22%  Similarity=0.374  Sum_probs=29.6

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHh----CCCeEEEEecCCch
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQA----DNHQVRVLTRSRSK   86 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~----~g~~V~~~~r~~~~   86 (355)
                      .++|+|.| .|++|-.++..|.+    .|.+|+.+.+.+..
T Consensus        37 ~k~i~IvG-gG~~G~E~A~~l~~~~~~~g~~Vt~i~~~~~~   76 (137)
T d1m6ia2          37 VKSITIIG-GGFLGSELACALGRKARALGTEVIQLFPEKGN   76 (137)
T ss_dssp             CSEEEEEC-CSHHHHHHHHHHHHHHHHHTCEEEEECSSSST
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHHHHHhcCCEEEEecccccC
Confidence            36899999 59999999998863    58999999987643

>d1np3a2 c.2.1.6 (A:1-182) Class I ketol-acid reductoisomerase (KARI) {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Class I ketol-acid reductoisomerase (KARI)
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=87.17  E-value=0.35  Score=35.58  Aligned_cols=65  Identities=20%  Similarity=0.207  Sum_probs=49.8

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcCCCcEEEECC
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLA  124 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a  124 (355)
                      .++|.|+| -|-.|++=+.-|.+.|.+|++--|..++......      ..++++   -++.++.+..|+|..+.
T Consensus        16 ~k~IaViG-YGsQG~AhAlNLrDSG~~V~VGLr~gs~s~~~A~------~~Gf~v---~~~~eA~~~aDiim~L~   80 (182)
T d1np3a2          16 GKKVAIIG-YGSQGHAHACNLKDSGVDVTVGLRSGSATVAKAE------AHGLKV---ADVKTAVAAADVVMILT   80 (182)
T ss_dssp             TSCEEEEC-CSHHHHHHHHHHHHTTCCEEEECCTTCHHHHHHH------HTTCEE---ECHHHHHHTCSEEEECS
T ss_pred             CCEEEEEe-eCcHhHHHHhhhhhcCCCEEEEcCCCCccHHHHh------hhcccc---ccHHHHhhhcCeeeeec
Confidence            47899999 9999999999999999999998887654322211      122333   46677888999999886

>d1w4xa1 c.3.1.5 (A:10-154,A:390-542) Phenylacetone monooxygenase {Thermobifida fusca [TaxId: 2021]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Phenylacetone monooxygenase
species: Thermobifida fusca [TaxId: 2021]

Probab=86.74  E-value=0.38  Score=39.18  Aligned_cols=34  Identities=29%  Similarity=0.439  Sum_probs=31.2

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCc
Q 018503           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRS   85 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~   85 (355)
                      ..|+|+| +|+.|-..+..|.+.|.+|.++.+.++
T Consensus         8 ~dV~IIG-AG~sGl~~a~~L~~~G~~v~i~Ek~~~   41 (298)
T d1w4xa1           8 VDVLVVG-AGFSGLYALYRLRELGRSVHVIETAGD   41 (298)
T ss_dssp             EEEEEEC-CSHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred             CCEEEEC-ccHHHHHHHHHHHhCCCCEEEEEcCCC
Confidence            4799999 699999999999999999999998765

>d2nu7a1 c.2.1.8 (A:2-120) Succinyl-CoA synthetase, alpha-chain, N-terminal (CoA-binding) domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Succinyl-CoA synthetase, alpha-chain, N-terminal (CoA-binding) domain
species: Escherichia coli [TaxId: 562]

Probab=86.71  E-value=3.2  Score=28.01  Aligned_cols=37  Identities=16%  Similarity=0.021  Sum_probs=32.1

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchh
Q 018503           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKA   87 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~   87 (355)
                      .||+|-|-||..|+.-+++.++-|-+|.+-+......
T Consensus         7 trVlvQGiTG~~G~~ht~~m~~yGT~vVaGVtPgkgG   43 (119)
T d2nu7a1           7 TKVICQGFTGSQGTFHSEQAIAYGTKMVGGVTPGKGG   43 (119)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHTCEEEEEECTTCTT
T ss_pred             CcEEEEcCCCcHHHHHHHHHHHhCCceEEEEccCCCC
Confidence            5899999999999999999999999998877755443

>d1bgva1 c.2.1.7 (A:195-449) Glutamate dehydrogenase {Clostridium symbiosum [TaxId: 1512]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Clostridium symbiosum [TaxId: 1512]

Probab=86.55  E-value=0.33  Score=38.51  Aligned_cols=35  Identities=17%  Similarity=0.199  Sum_probs=31.1

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHhCCCeEEEEecC
Q 018503           48 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRS   83 (355)
Q Consensus        48 ~~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~   83 (355)
                      .+.++|+|-| .|.+|+++++.|.+.|.+|++++-+
T Consensus        34 l~g~~v~IQG-fGnVG~~~a~~L~e~GakvvavsD~   68 (255)
T d1bgva1          34 LVGKTVALAG-FGNVAWGAAKKLAELGAKAVTLSGP   68 (255)
T ss_dssp             STTCEEEECC-SSHHHHHHHHHHHHHTCEEEEEEET
T ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEEecC
Confidence            3557999999 8999999999999999999988764

>d2v5za1 c.3.1.2 (A:6-289,A:402-500) Monoamine oxidase B {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Monoamine oxidase B
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.92  E-value=0.41  Score=39.48  Aligned_cols=32  Identities=28%  Similarity=0.331  Sum_probs=29.4

Q ss_pred             EEEEcCCchHHHHHHHHHHhCCCeEEEEecCCc
Q 018503           53 VSVTGATGFIGRRLVQRLQADNHQVRVLTRSRS   85 (355)
Q Consensus        53 IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~   85 (355)
                      |+|+| +|..|-..+..|.++|++|+++.++..
T Consensus         2 ViVIG-aG~aGL~aA~~L~~~G~~V~VlE~~~~   33 (383)
T d2v5za1           2 VVVVG-GGISGMAAAKLLHDSGLNVVVLEARDR   33 (383)
T ss_dssp             EEEEC-CBHHHHHHHHHHHHTTCCEEEEESSSS
T ss_pred             EEEEC-CCHHHHHHHHHHHhCCCCEEEEecCCC
Confidence            78999 799999999999999999999998664

>d1n4wa1 c.3.1.2 (A:9-318,A:451-507) Cholesterol oxidase of GMC family {Streptomyces sp. [TaxId: 1931]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Cholesterol oxidase of GMC family
species: Streptomyces sp. [TaxId: 1931]

Probab=85.88  E-value=0.37  Score=40.33  Aligned_cols=31  Identities=26%  Similarity=0.265  Sum_probs=28.7

Q ss_pred             EEEEcCCchHHHHHHHHHHhCCCeEEEEecCC
Q 018503           53 VSVTGATGFIGRRLVQRLQADNHQVRVLTRSR   84 (355)
Q Consensus        53 IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~   84 (355)
                      |+|+| +|+-|..++.+|.+.|++|.++-+..
T Consensus         5 VIVVG-sG~aG~v~A~rLaeaG~~VlvLEaG~   35 (367)
T d1n4wa1           5 AVVIG-TGYGAAVSALRLGEAGVQTLMLEMGQ   35 (367)
T ss_dssp             EEEEC-CSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred             EEEeC-cCHHHHHHHHHHHHCcCeEEEEecCC
Confidence            88999 89999999999999999999999853

>d2nvwa1 c.2.1.3 (A:2-154,A:374-457) Galactose/lactose metabolism regulatory protein GAL80 {Yeast (Kluyveromyces lactis) [TaxId: 28985]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Galactose/lactose metabolism regulatory protein GAL80
species: Yeast (Kluyveromyces lactis) [TaxId: 28985]

Probab=84.57  E-value=0.76  Score=35.85  Aligned_cols=71  Identities=11%  Similarity=0.098  Sum_probs=40.9

Q ss_pred             CCCEEEEEcCC---chHHHHHHHHHHhC--CCeEEEE-ecCCchhhccCCCCCCccCCCeeecCCcchhhhcC--CCcEE
Q 018503           49 SQMTVSVTGAT---GFIGRRLVQRLQAD--NHQVRVL-TRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ--GSTAV  120 (355)
Q Consensus        49 ~~~~IlVtGat---G~iG~~l~~~L~~~--g~~V~~~-~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--~~d~v  120 (355)
                      .++||.|+|..   |+++..-+..+.+.  +.+|+++ +++.+..........   ....  ...++++++++  ++|+|
T Consensus        15 k~irvgiIG~G~~~~~~~~~h~~ai~~~~~~~~ivav~d~~~~~~~~~~~~~~---~~~~--~~~~~~~~l~~~~~iD~V   89 (237)
T d2nvwa1          15 RPIRVGFVGLTSGKSWVAKTHFLAIQQLSSQFQIVALYNPTLKSSLQTIEQLQ---LKHA--TGFDSLESFAQYKDIDMI   89 (237)
T ss_dssp             CCEEEEEECCCSTTSHHHHTHHHHHHHTTTTEEEEEEECSCHHHHHHHHHHTT---CTTC--EEESCHHHHHHCTTCSEE
T ss_pred             CCeEEEEEecCccccHHHHHHHHHHHhcCCCeEEEEEEcCCHHHHHHHHHhcc---cccc--eeecchhhccccccccee
Confidence            45799999964   46777777777653  5788875 455444333222110   1111  12345555553  68888


Q ss_pred             EECC
Q 018503          121 VNLA  124 (355)
Q Consensus       121 i~~a  124 (355)
                      +-+.
T Consensus        90 ~i~t   93 (237)
T d2nvwa1          90 VVSV   93 (237)
T ss_dssp             EECS
T ss_pred             eccC
Confidence            8875

>d1euca1 c.2.1.8 (A:1-130) Succinyl-CoA synthetase, alpha-chain, N-terminal (CoA-binding) domain {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Succinyl-CoA synthetase, alpha-chain, N-terminal (CoA-binding) domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=84.54  E-value=3.9  Score=28.06  Aligned_cols=37  Identities=19%  Similarity=0.023  Sum_probs=32.3

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchh
Q 018503           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKA   87 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~   87 (355)
                      .||+|-|-||..|+.-+++.++-|-+|.+-+......
T Consensus        16 TrVivQGiTG~~G~~ht~~m~~YGT~iVaGVtPgKgG   52 (130)
T d1euca1          16 TKVICQGFTGKQGTFHSQQALEYGTNLVGGTTPGKGG   52 (130)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHTCEEEEEECTTCTT
T ss_pred             CeEEEEcCCCcHHHHHHHHHHHhcCCeEEeeccCCCC
Confidence            5899999999999999999999999998877655443

>d1gado1 c.2.1.3 (O:0-148,O:313-330) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Escherichia coli [TaxId: 562]

Probab=83.69  E-value=1.3  Score=32.22  Aligned_cols=33  Identities=21%  Similarity=0.364  Sum_probs=27.9

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhC-CCeEEEEecCC
Q 018503           51 MTVSVTGATGFIGRRLVQRLQAD-NHQVRVLTRSR   84 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~-g~~V~~~~r~~   84 (355)
                      |||.|-| =|.||+.+.+.++++ ..+|.++.-..
T Consensus         2 ikigING-FGRIGR~v~R~~~~~~~i~ivaINd~~   35 (166)
T d1gado1           2 IKVGING-FGRIGRIVFRAAQKRSDIEIVAINDLL   35 (166)
T ss_dssp             EEEEEEC-CSHHHHHHHHHHHTCSSEEEEEEECSS
T ss_pred             eEEEEEC-CcHHHHHHHHHHhhCCCeEEEEEeCCC
Confidence            6899999 899999999999997 47888877543

>d1oi7a1 c.2.1.8 (A:1-121) Succinyl-CoA synthetase, alpha-chain, N-terminal (CoA-binding) domain {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Succinyl-CoA synthetase, alpha-chain, N-terminal (CoA-binding) domain
species: Thermus thermophilus [TaxId: 274]

Probab=83.25  E-value=5  Score=27.14  Aligned_cols=37  Identities=16%  Similarity=0.137  Sum_probs=32.2

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCchh
Q 018503           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKA   87 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~   87 (355)
                      .||+|-|-||..|+.-+++.++-|-+|.+-+......
T Consensus         8 trVivQGiTG~~G~~ht~~m~~yGT~iVaGVtPgkgG   44 (121)
T d1oi7a1           8 TRVLVQGITGREGQFHTKQMLTYGTKIVAGVTPGKGG   44 (121)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHTCEEEEEECTTCTT
T ss_pred             CcEEEEcCCCcHHHHHHHHHHHhCCceEeeeecCCCC
Confidence            4899999999999999999999999998877755443

>d1cjca2 c.4.1.1 (A:6-106,A:332-460) Adrenodoxin reductase of mitochondrial p450 systems {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Adrenodoxin reductase of mitochondrial p450 systems
species: Cow (Bos taurus) [TaxId: 9913]

Probab=83.13  E-value=0.69  Score=35.66  Aligned_cols=35  Identities=20%  Similarity=0.252  Sum_probs=30.3

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhC--CCeEEEEecCCch
Q 018503           51 MTVSVTGATGFIGRRLVQRLQAD--NHQVRVLTRSRSK   86 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~   86 (355)
                      .||+|+| +|--|-..+..|.+.  ||+|+++.+.+..
T Consensus         2 ~kv~iIG-aGpaGl~aA~~L~~~~~~~~V~v~e~~~~~   38 (230)
T d1cjca2           2 PQICVVG-SGPAGFYTAQHLLKHHSRAHVDIYEKQLVP   38 (230)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHHCSSCEEEEECSSSSS
T ss_pred             CeEEEEC-ccHHHHHHHHHHHhcCCCCeEEEEeCCCCC
Confidence            3899999 799999999999764  8999999987653

>d1gtea3 c.3.1.1 (A:288-440) Dihydropyrimidine dehydrogenase, domain 3 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 3
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=82.48  E-value=1.6  Score=31.24  Aligned_cols=36  Identities=17%  Similarity=0.054  Sum_probs=29.7

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHhCCC-eEEEEecCC
Q 018503           48 ASQMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSR   84 (355)
Q Consensus        48 ~~~~~IlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~   84 (355)
                      ..+++|+|+| .|.+|.-.+..+++.|. .|+.+.|..
T Consensus        43 ~~~~kVvVIG-GGdtA~D~A~~a~r~GA~~V~vi~rr~   79 (153)
T d1gtea3          43 SIRGAVIVLG-AGDTAFDCATSALRCGARRVFLVFRKG   79 (153)
T ss_dssp             CCCSEEEEEC-SSHHHHHHHHHHHHTTCSEEEEECSSC
T ss_pred             cCCCEEEEEC-CChhHHHHHHHHHHcCCcceeEEEeCC
Confidence            3456899998 69999999999999985 577887754

>d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Peptidoglycan biosynthesis glycosyltransferase MurG
domain: Peptidoglycan biosynthesis glycosyltransferase MurG
species: Escherichia coli [TaxId: 562]

Probab=81.86  E-value=0.88  Score=37.22  Aligned_cols=34  Identities=29%  Similarity=0.391  Sum_probs=23.8

Q ss_pred             CEEEEEcC-C-chH--HHHHHHHHHhCCCeEEEEecCC
Q 018503           51 MTVSVTGA-T-GFI--GRRLVQRLQADNHQVRVLTRSR   84 (355)
Q Consensus        51 ~~IlVtGa-t-G~i--G~~l~~~L~~~g~~V~~~~r~~   84 (355)
                      |||+|++| | |-+  +.+|+++|.++||+|..++...
T Consensus         1 kkili~~~GtGGHv~~a~al~~~L~~~G~eV~~i~~~~   38 (351)
T d1f0ka_           1 KRLMVMAGGTGGHVFPGLAVAHHLMAQGWQVRWLGTAD   38 (351)
T ss_dssp             CEEEEECCSSHHHHHHHHHHHHHHHTTTCEEEEEECTT
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHHHHhCCCEEEEEEeCC
Confidence            47887763 3 333  3358899999999998877543

>d2i0za1 c.3.1.8 (A:1-192,A:362-420) Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Flavoprotein BC4706
species: Bacillus cereus [TaxId: 1396]

Probab=81.61  E-value=0.86  Score=35.45  Aligned_cols=34  Identities=21%  Similarity=0.194  Sum_probs=30.6

Q ss_pred             EEEEEcCCchHHHHHHHHHHhCCCeEEEEecCCch
Q 018503           52 TVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSK   86 (355)
Q Consensus        52 ~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~   86 (355)
                      -|+|+| +|..|...+..|.+.|++|.++.+++..
T Consensus         4 DViIIG-aG~aGl~aA~~la~~G~~V~liEk~~~~   37 (251)
T d2i0za1           4 DVIVIG-GGPSGLMAAIGAAEEGANVLLLDKGNKL   37 (251)
T ss_dssp             SEEEEC-CSHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred             CEEEEC-cCHHHHHHHHHHHHCCCcEEEEeCCCCC
Confidence            489999 6999999999999999999999987643

>d1omoa_ c.2.1.13 (A:) Archaeal alanine dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Ornithine cyclodeaminase-like
domain: Archaeal alanine dehydrogenase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=81.44  E-value=0.47  Score=39.05  Aligned_cols=70  Identities=11%  Similarity=0.048  Sum_probs=46.4

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHhC-C-CeEEEEecCCchhhccCCCCCCccCCCeeecCCcchhhhcCCCcEEEECCC
Q 018503           50 QMTVSVTGATGFIGRRLVQRLQAD-N-HQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG  125 (355)
Q Consensus        50 ~~~IlVtGatG~iG~~l~~~L~~~-g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~  125 (355)
                      ..++.|+| +|.+++..++.|... . .+|++.+|++++...+.....   ...++.  ..+..+.+.++|+|+.+..
T Consensus       125 ~~~l~iiG-aG~QA~~~~~al~~~~~i~~i~v~~r~~e~~~~~~~~~~---~~~~~~--~~~~~~a~~~aDiV~taT~  196 (320)
T d1omoa_         125 SSVFGFIG-CGTQAYFQLEALRRVFDIGEVKAYDVREKAAKKFVSYCE---DRGISA--SVQPAEEASRCDVLVTTTP  196 (320)
T ss_dssp             CCEEEEEC-CSHHHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHH---HTTCCE--EECCHHHHTSSSEEEECCC
T ss_pred             ccEEEEec-CcccHHHHHHHHHHHhhhhhcccccCCHHHHHHHHHHHH---hcCCcc--ccchhhhhccccEEEEecc
Confidence            35788988 899999999998873 4 589999999877654432110   001111  1123455678999998765

>d1rq2a1 c.32.1.1 (A:8-205) Cell-division protein FtsZ {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: Tubulin nucleotide-binding domain-like
superfamily: Tubulin nucleotide-binding domain-like
family: Tubulin, GTPase domain
domain: Cell-division protein FtsZ
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=80.68  E-value=1.8  Score=32.49  Aligned_cols=102  Identities=15%  Similarity=0.157  Sum_probs=59.6

Q ss_pred             EEEEEcCCchHHHHHHHHHHhCC---CeEEEEecCCchhhccCCC-----CC-Cc--cCCCee--------ecCCcchhh
Q 018503           52 TVSVTGATGFIGRRLVQRLQADN---HQVRVLTRSRSKAELIFPG-----KK-TR--FFPGVM--------IAEEPQWRD  112 (355)
Q Consensus        52 ~IlVtGatG~iG~~l~~~L~~~g---~~V~~~~r~~~~~~~~~~~-----~~-~~--~~~~~d--------~~~~~~~~~  112 (355)
                      +|-|+| -|.-|..++..|.+.+   .+.+++.-+..........     .. .+  .-.+.|        ..+.+.+.+
T Consensus         3 ~IkViG-vGGaG~n~vn~~~~~~~~~v~~iainTD~~~L~~~~~~~ki~iG~~~t~G~Gagg~p~~g~~aa~e~~~~I~~   81 (198)
T d1rq2a1           3 VIKVVG-IGGGGVNAVNRMIEQGLKGVEFIAINTDAQALLMSDADVKLDVGRDSTRGLGAGADPEVGRKAAEDAKDEIEE   81 (198)
T ss_dssp             CEEEEE-EHHHHHHHHHHHHHTTCCSEEEEEEESCHHHHHHCCCSEEEECCTTTC-----CCCHHHHHHHHHHTHHHHHH
T ss_pred             eEEEEE-eCchHHHHHHHHHHcCCCCceEEEEcchHHHHhcCCcchhhccccccccCCCcCcChhhhHhhHHHHHHHHHH
Confidence            466788 6888999999999986   3666666543332221110     00 00  000111        115667888


Q ss_pred             hcCCCcEEEECCCCCCCCCCChhhHHHHHHHhhhhHHHHHHHHHcCCCCCCcEEEEe
Q 018503          113 CIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVS  169 (355)
Q Consensus       113 ~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~S  169 (355)
                      .+++.|.||-+||....             +-..++-.+.+.+++  .+.-.+-+++
T Consensus        82 ~l~~~d~vfi~AGlGGg-------------TGtGaaPviA~iake--~g~l~v~ivt  123 (198)
T d1rq2a1          82 LLRGADMVFVTAGEGGG-------------TGTGGAPVVASIARK--LGALTVGVVT  123 (198)
T ss_dssp             HHTTCSEEEEEEETTSS-------------HHHHHHHHHHHHHHH--HTCEEEEEEE
T ss_pred             HhcCCCEEEEEEecCCC-------------CCcchHHHHHHHHHH--cCCcEEEEEe
Confidence            89999999999998543             122334456788888  4544343333

>d2g82a1 c.2.1.3 (A:1-148,A:311-330) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Thermus aquaticus [TaxId: 271]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Thermus aquaticus [TaxId: 271]

Probab=80.58  E-value=0.82  Score=33.53  Aligned_cols=32  Identities=28%  Similarity=0.511  Sum_probs=28.6

Q ss_pred             CEEEEEcCCchHHHHHHHHHHhCCCeEEEEecC
Q 018503           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRS   83 (355)
Q Consensus        51 ~~IlVtGatG~iG~~l~~~L~~~g~~V~~~~r~   83 (355)
                      |||.|-| =|.||+.+.+.|.+++.+|.++.-.
T Consensus         1 ikigING-fGRIGR~~~R~l~~~~i~iv~INd~   32 (168)
T d2g82a1           1 MKVGING-FGRIGRQVFRILHSRGVEVALINDL   32 (168)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHHTCCEEEEECS
T ss_pred             CEEEEEC-CcHHHHHHHHHHhcCCCEEEEECCC
Confidence            6899998 8999999999999999999888754

>d1sbza_ c.34.1.1 (A:) Probable aromatic acid decarboxylase Pad1 {Escherichia coli O157:H7 [TaxId: 83334]}

class: Alpha and beta proteins (a/b)
fold: Homo-oligomeric flavin-containing Cys decarboxylases, HFCD
superfamily: Homo-oligomeric flavin-containing Cys decarboxylases, HFCD
family: Homo-oligomeric flavin-containing Cys decarboxylases, HFCD
domain: Probable aromatic acid decarboxylase Pad1
species: Escherichia coli O157:H7 [TaxId: 83334]

Probab=80.09  E-value=1.1  Score=33.55  Aligned_cols=30  Identities=37%  Similarity=0.515  Sum_probs=23.3

Q ss_pred             EEEEcCCc-hHHHHHHHHHHhC-CCeEEEEec
Q 018503           53 VSVTGATG-FIGRRLVQRLQAD-NHQVRVLTR   82 (355)
Q Consensus        53 IlVtGatG-~iG~~l~~~L~~~-g~~V~~~~r   82 (355)
                      +.||||+| ..+..+++.|.+. |++|.++.-
T Consensus         5 lgITGas~a~~a~~ll~~L~~~~g~~V~vv~T   36 (186)
T d1sbza_           5 VGMTGATGAPLGVALLQALREMPNVETHLVMS   36 (186)
T ss_dssp             EEECSSSCHHHHHHHHHHHHTCTTCEEEEEEC
T ss_pred             EEEccHHHHHHHHHHHHHHHHhcCCEEEEEEC
Confidence            44789888 5588999999985 889877654