Citrus Sinensis ID: 018503

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-----
MDVLLCRASTLTWSQSISPCLHSSAKPFSRCEAKKFRVFCTSDHTQKASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDYLAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPFKYRYVKDALKAIMS
ccccccccccccccccccccccccccccccHHHHHHHHcccccccccccccEEEEEccccHHHHHHHHHHHHcccEEEEEEcccccccccccccccccccccccccccccccccccccEEEEcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHccccccccEEEEEcEEEEEcccccEEEccccccccccHHHHHHHHHHHHHcccccccEEEEEEcEEEccccccHHHHHHHHHccccccccccccccccccHHHHHHHHHHHHHccccccccECcccccccHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHcccccccHHHHHcccccccccHHHHHHHHHc
**VLLCRASTLTWSQSISPCLHSSAKPFSRCEAKKFRVFCTSDHTQKASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDYLAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPFKYRYVKDALKAIMS
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MDVLLCRASTLTWSQSISPCLHSSAKPFSRCEAKKFRVFCTSDHTQKASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDYLAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPFKYRYVKDALKAIMS

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Epimerase family protein SE_0553 probableQ8CPY7
Epimerase family protein SAB0724c probableQ2YSF6
Epimerase family protein SH2119 probableQ4L4J7

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 3OH8, chain A
Confidence level:very confident
Coverage over the Query: 50-89,100-297,319-355
View the alignment between query and template
View the model in PyMOL
Template: 4DA9, chain A
Confidence level:confident
Coverage over the Query: 46-171,190-225,254-285
View the alignment between query and template
View the model in PyMOL