Citrus Sinensis ID: 018512

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350----
Protein Sequence
MEFSSEANQRIARISAHLYPPNLQENSCLRQAKCRAKGGAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSIQKGISFSKK
Secondary Structure (PSIPRED)
ccccHHHHHHHHHHHHcccccccccHHHHHHHHHcccccccccEEEEEcccccccHHHHHHHHHcccccEEEEEEccccccHHHHcccccccccEEEEcccccHHHHHccccEEEEcccccccccccHHHHHHHHHHHHHHHHHHHHHHccccEEEEEccccccHHHHHHHHHHHHcccccccEEEEcccHHHHHHHHHHHHHccccccccEEEEccccccccccccccccccccccHHHHHHHHHHHHccccEEEEccccccccHHHHHHHHHHHHHHHHHHHcccccccEEEEEEcccccccEEEEEEEEcccEEEEEEccccccHHHHHHHHHHHHHHHHHHHHHHHHHcc
Secondary Structure Prediction (SSPRO)
ccccccHHHHHHHHHHHcccHHHHHHHHHHHHHHHccccccccEEEEEccccccHHHHHHHHHHcccccEEEEEEcccHHHHHHHHcccccccEEEEEEcHHHHHHHHccccEEEEccccccccccccHHHHHHHHHHHHHHHHHHHccccccEEEEccccHHHHHHHHHHHHHHccccccccEEEccHHHHHHHHHHHHHHccccHHHcEccEEEcccHHHEEEcHHHcEccccccHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHccccccEEEEEEEcccccccEEEEEEEEEccEEEEEcccccccHHHHHHHHHHHHHHHHHHHHHHHHHcc
Coil and Loop (DISEMBL)
MEFSSEANQRIARISahlyppnlqensclRQAKCRAKGGAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYdvvntpgvtadishmdtgavvrgflgqpqlenaltgmdlviipagvprkpgmtrddlfnINAGIVRTLCEGIakccpnatvnlisnpvnstvPIAAEVFkkagtydpkkllGVTMLDVVRANTFVAEVlgldprdvdvpvvgghagvtilpllsqvkppcsftqEETEYLTNRIQNGGTEVVeakagagsaTLSMAYAAVKFADACLRGLRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEeifqlgplneyerIGLEKAKKELAGSIQkgisfskk
Flexible Loop (DISEMBL)
MEFSSEANQRIARIsahlyppnlQENSCLRQAKCRAKGGAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEvlgldprdvdvpVVGGHAGVTilpllsqvkpPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEifqlgplneYERIGLEKAKKElagsiqkgisfskk
Low Complexity Region (SEG)
MEFSSEANQRIARISAHLYPPNLQENSCLRQAKCRAKGGAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEvlgldprdvdvpvvggHAGVTILPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSIQKGISFSKK
Disordered region (IsUnstruct)
**************SAHLYPPNLQENSCLRQAKCRAKGGAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQLGPLNEYERIGL********************
Disordered Region (DISOPRED)
********************************************VAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSIQKGISFSKK
Disordered Region (DISEMBL)
*********RIARISAHLYPPNLQENSCLRQAKCRAKGGAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSIQKGISFSKK
Disordered Region (DISPRO)
*********************************CRAKGGAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSIQKGISFSKK
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MEFSSEANQRIARISAHLYPPNLQENSCLRQAKCRAKGGAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSIQKGISFSKK
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	354	2.2.26 [Sep-21-2011]
P19446	356	Malate dehydrogenase, gly	N/A	no	0.991	0.985	0.883	0.0
P46488	356	Malate dehydrogenase, gly	N/A	no	0.997	0.991	0.878	0.0
O82399	354	Probable malate dehydroge	yes	no	0.985	0.985	0.847	1e-174
Q42972	356	Malate dehydrogenase, gly	yes	no	1.0	0.994	0.848	1e-174
P37228	353	Malate dehydrogenase, gly	no	no	0.997	1.0	0.833	1e-172
Q9ZP05	354	Malate dehydrogenase, gly	no	no	1.0	1.0	0.853	1e-170
Q9XFW3	358	Malate dehydrogenase 2, g	N/A	no	1.0	0.988	0.837	1e-167
Q43743	358	Malate dehydrogenase 1, g	N/A	no	1.0	0.988	0.837	1e-166
P17783	347	Malate dehydrogenase, mit	N/A	no	0.872	0.890	0.676	1e-118
Q9ZP06	341	Malate dehydrogenase 1, m	no	no	0.937	0.973	0.626	1e-117

>sp|P19446|MDHG_CITLA Malate dehydrogenase, glyoxysomal OS=Citrullus lanatus PE=1 SV=1

 Score =  637 bits (1644), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 312/353 (88%), Positives = 331/353 (93%), Gaps = 2/353 (0%)

Query: 1   MEFSSEANQRIARISAHLYPP--NLQENSCLRQAKCRAKGGAAGFKVAILGAAGGIGQPL 58
           M+   + NQRIARISAHL+PP   ++E+S LR+A CRAKGGA GFKVAILGAAGGIGQPL
Sbjct: 1   MQPIPDVNQRIARISAHLHPPKSQMEESSALRRANCRAKGGAPGFKVAILGAAGGIGQPL 60

Query: 59  AMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA 118
           AMLMK+NPLVSVLHLYDVVN PGVTADISHMDTGAVVRGFLGQ QLE ALTGMDL+I+PA
Sbjct: 61  AMLMKMNPLVSVLHLYDVVNAPGVTADISHMDTGAVVRGFLGQQQLEAALTGMDLIIVPA 120

Query: 119 GVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGT 178
           GVPRKPGMTRDDLF INAGIV+TLCEGIAKCCP A VNLISNPVNSTVPIAAEVFKKAGT
Sbjct: 121 GVPRKPGMTRDDLFKINAGIVKTLCEGIAKCCPRAIVNLISNPVNSTVPIAAEVFKKAGT 180

Query: 179 YDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPCSFTQ 238
           YDPK+LLGVTMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPP SFTQ
Sbjct: 181 YDPKRLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPSSFTQ 240

Query: 239 EETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECAFVAS 298
           EE  YLT+RIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRGLRGDAGV+ECAFV+S
Sbjct: 241 EEISYLTDRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVIECAFVSS 300

Query: 299 QVTELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSIQKGISF 351
           QVTELPFFASKVRLGR G EE++ LGPLNEYERIGLEKAKKELAGSI+KG+SF
Sbjct: 301 QVTELPFFASKVRLGRNGIEEVYSLGPLNEYERIGLEKAKKELAGSIEKGVSF 353

Citrullus lanatus (taxid: 3654)
EC: 1EC: .EC: 1EC: .EC: 1EC: .EC: 3EC: 7

>sp|P46488|MDHG_CUCSA Malate dehydrogenase, glyoxysomal OS=Cucumis sativus GN=MDHG PE=2 SV=1

 Score =  635 bits (1637), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 312/355 (87%), Positives = 331/355 (93%), Gaps = 2/355 (0%)

Query: 1   MEFSSEANQRIARISAHLYPPNLQ--ENSCLRQAKCRAKGGAAGFKVAILGAAGGIGQPL 58
           M+   + NQRIARISAHL+PP  Q  E+S LR+A CRAKGGA GFKVAILGAAGGIGQPL
Sbjct: 1   MQPIPDVNQRIARISAHLHPPKYQMEESSVLRRANCRAKGGAPGFKVAILGAAGGIGQPL 60

Query: 59  AMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA 118
           AMLMK+NPLVSVLHLYDVVN PGVTADISHMDTGAVVRGFLGQ QLE ALTGMDLV+IPA
Sbjct: 61  AMLMKMNPLVSVLHLYDVVNAPGVTADISHMDTGAVVRGFLGQQQLERALTGMDLVVIPA 120

Query: 119 GVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGT 178
           GVPRKPGMTRDDLF INAGIV+TLCEGIAKCCP A VNLISNPVNSTVPIAAEVFKKAGT
Sbjct: 121 GVPRKPGMTRDDLFKINAGIVKTLCEGIAKCCPTAIVNLISNPVNSTVPIAAEVFKKAGT 180

Query: 179 YDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPCSFTQ 238
           YDPK+LLGVTMLDVVRANTFVAEVLGLDPRDV+VPVVGGHAGVTILPLLSQVKPP SFTQ
Sbjct: 181 YDPKRLLGVTMLDVVRANTFVAEVLGLDPRDVNVPVVGGHAGVTILPLLSQVKPPSSFTQ 240

Query: 239 EETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECAFVAS 298
           EE  YLT+RIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECAFV+S
Sbjct: 241 EEINYLTDRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECAFVSS 300

Query: 299 QVTELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSIQKGISFSK 353
           QVTELPFFA+KVRLGR G +E++ LGPLNEYERIGLEKAKKELAGSI+KG+SF +
Sbjct: 301 QVTELPFFATKVRLGRNGIDEVYSLGPLNEYERIGLEKAKKELAGSIEKGVSFIR 355

Cucumis sativus (taxid: 3659)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 3

EC: 7

>sp|O82399|MDHG2_ARATH Probable malate dehydrogenase, glyoxysomal OS=Arabidopsis thaliana GN=At2g22780 PE=1 SV=1

 Score =  611 bits (1575), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 299/353 (84%), Positives = 323/353 (91%), Gaps = 4/353 (1%)

Query: 6   EANQRIARISAHLYPPNLQ----ENSCLRQAKCRAKGGAAGFKVAILGAAGGIGQPLAML 61
           + NQRIARISAHL PPNL     + S L +  CRAKGG+ GFKVAILGAAGGIGQPLAML
Sbjct: 2   DPNQRIARISAHLNPPNLHNQIADGSGLNRVACRAKGGSPGFKVAILGAAGGIGQPLAML 61

Query: 62  MKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVP 121
           MK+NPLVSVLHLYDV N PGVTADISHMDT AVVRGFLGQPQLE ALTGMDLVIIPAGVP
Sbjct: 62  MKMNPLVSVLHLYDVANAPGVTADISHMDTSAVVRGFLGQPQLEEALTGMDLVIIPAGVP 121

Query: 122 RKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDP 181
           RKPGMTRDDLFNINAGIVRTL E IAKCCP A VN+ISNPVNSTVPIAAEVFKKAGT+DP
Sbjct: 122 RKPGMTRDDLFNINAGIVRTLSEAIAKCCPKAIVNIISNPVNSTVPIAAEVFKKAGTFDP 181

Query: 182 KKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPCSFTQEET 241
           KKL+GVTMLDVVRANTFVAEV+ LDPR+V+VPVVGGHAGVTILPLLSQVKPPCSFTQ+E 
Sbjct: 182 KKLMGVTMLDVVRANTFVAEVMSLDPREVEVPVVGGHAGVTILPLLSQVKPPCSFTQKEI 241

Query: 242 EYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECAFVASQVT 301
           EYLT+RIQNGGTEVVEAKAGAGSATLSMAYAAV+FADACLRGLRGDA +VECA+VAS VT
Sbjct: 242 EYLTDRIQNGGTEVVEAKAGAGSATLSMAYAAVEFADACLRGLRGDANIVECAYVASHVT 301

Query: 302 ELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSIQKGISFSKK 354
           ELPFFASKVRLGR G +E++ LGPLNEYER+GLEKAKKEL+ SI KG++F+KK
Sbjct: 302 ELPFFASKVRLGRCGIDEVYGLGPLNEYERMGLEKAKKELSVSIHKGVTFAKK 354

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 3

EC: 7

>sp|Q42972|MDHG_ORYSJ Malate dehydrogenase, glyoxysomal OS=Oryza sativa subsp. japonica GN=Os12g0632700 PE=1 SV=3

 Score =  610 bits (1572), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 302/356 (84%), Positives = 326/356 (91%), Gaps = 2/356 (0%)

Query: 1   MEFSSEANQRIARISAHLYPP--NLQENSCLRQAKCRAKGGAAGFKVAILGAAGGIGQPL 58
           ME ++ A +R+ R+++HL PP   ++E+  LR + CRAKG A GFKVAILGA+GGIGQPL
Sbjct: 1   MEDAAAAARRMERLASHLRPPASQMEESPLLRGSNCRAKGAAPGFKVAILGASGGIGQPL 60

Query: 59  AMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA 118
           A+LMK+NPLVSVLHLYDVVNTPGVTADISHM+TGAVVRGFLGQPQLENALTGMDLVIIPA
Sbjct: 61  ALLMKMNPLVSVLHLYDVVNTPGVTADISHMNTGAVVRGFLGQPQLENALTGMDLVIIPA 120

Query: 119 GVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGT 178
           GVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNA VN+ISNPVNSTVPIAAEVFKKAGT
Sbjct: 121 GVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNAIVNVISNPVNSTVPIAAEVFKKAGT 180

Query: 179 YDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPCSFTQ 238
           YDPK+LLGVT LDVVRANTFVAEVLGLDPRDV+VPV+GGHAGVTILPLLSQV PPCSFT 
Sbjct: 181 YDPKRLLGVTTLDVVRANTFVAEVLGLDPRDVNVPVIGGHAGVTILPLLSQVNPPCSFTS 240

Query: 239 EETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECAFVAS 298
           EE  YLT RIQNGGTEVVEAKAGAGSATLSMAYAA KFADACLRGLRGDAG+VEC+FVAS
Sbjct: 241 EEISYLTTRIQNGGTEVVEAKAGAGSATLSMAYAASKFADACLRGLRGDAGIVECSFVAS 300

Query: 299 QVTELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSIQKGISFSKK 354
           QVTELPFFASKVRLGR G EEI  LGPLNE+ER GLEKAKKELA SIQKG++F  K
Sbjct: 301 QVTELPFFASKVRLGRCGIEEILSLGPLNEFERAGLEKAKKELAESIQKGVAFINK 356

Oryza sativa subsp. japonica (taxid: 39947)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 3

EC: 7

>sp|P37228|MDHG_SOYBN Malate dehydrogenase, glyoxysomal OS=Glycine max PE=2 SV=2

 Score =  606 bits (1562), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 295/354 (83%), Positives = 324/354 (91%), Gaps = 1/354 (0%)

Query: 1   MEFSSEANQRIARISAHLYPPNLQENSCLRQAKCRAKGGAAGFKVAILGAAGGIGQPLAM 60
           ME +S A+ RI+RI+ HL P   +++ CL+++ CRAKGG +GFKVAILGAAGGIGQPLAM
Sbjct: 1   MEANSGASDRISRIAGHLRP-QREDDVCLKRSDCRAKGGVSGFKVAILGAAGGIGQPLAM 59

Query: 61  LMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGV 120
           LMK+NPLVS+LHLYDVVNTPGVT+DISHMDTGAVVRGFLGQ QLE+AL GMDLVIIPAGV
Sbjct: 60  LMKMNPLVSLLHLYDVVNTPGVTSDISHMDTGAVVRGFLGQQQLEDALIGMDLVIIPAGV 119

Query: 121 PRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYD 180
           PRKPGMTRDDLFNINAGIV+TLCE IAKCCP A VN+ISNPVNSTVPIAAEVFK+AGTYD
Sbjct: 120 PRKPGMTRDDLFNINAGIVKTLCEAIAKCCPKAIVNVISNPVNSTVPIAAEVFKRAGTYD 179

Query: 181 PKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPCSFTQEE 240
           PK+LLGVTMLDVVRANTFVAEVLG+DPRDVDVPVVGGHAG+TILPLLSQ+KPPCSFT +E
Sbjct: 180 PKRLLGVTMLDVVRANTFVAEVLGVDPRDVDVPVVGGHAGITILPLLSQIKPPCSFTPKE 239

Query: 241 TEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECAFVASQV 300
            EYLT RIQNGG EVVEAKAGAGSATLSMAYAAVKFADACL  LRGDAG++ECA+VASQV
Sbjct: 240 IEYLTGRIQNGGPEVVEAKAGAGSATLSMAYAAVKFADACLHALRGDAGIIECAYVASQV 299

Query: 301 TELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSIQKGISFSKK 354
           TELPFFASKVRLGR G EEI  LGPLN+YER  LEKAKKELA SI+KGISF +K
Sbjct: 300 TELPFFASKVRLGRVGVEEILPLGPLNDYERESLEKAKKELAASIEKGISFIRK 353

Glycine max (taxid: 3847)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 3

EC: 7

>sp|Q9ZP05|MDHG1_ARATH Malate dehydrogenase, glyoxysomal OS=Arabidopsis thaliana GN=At5g09660 PE=1 SV=1

 Score =  597 bits (1538), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 302/354 (85%), Positives = 323/354 (91%)

Query: 1   MEFSSEANQRIARISAHLYPPNLQENSCLRQAKCRAKGGAAGFKVAILGAAGGIGQPLAM 60
           MEF  +ANQRIARISAHL P    +NS + +  CRAKGG  GFKVAILGAAGGIGQ L++
Sbjct: 1   MEFRGDANQRIARISAHLTPQMEAKNSVIGRENCRAKGGNPGFKVAILGAAGGIGQSLSL 60

Query: 61  LMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGV 120
           LMK+NPLVS+LHLYDVVN PGVTAD+SHMDTGAVVRGFLG  QLE+ALTGMDLVIIPAG+
Sbjct: 61  LMKMNPLVSLLHLYDVVNAPGVTADVSHMDTGAVVRGFLGAKQLEDALTGMDLVIIPAGI 120

Query: 121 PRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYD 180
           PRKPGMTRDDLF INAGIV+TLCEG+AKCCPNA VNLISNPVNSTVPIAAEVFKKAGTYD
Sbjct: 121 PRKPGMTRDDLFKINAGIVKTLCEGVAKCCPNAIVNLISNPVNSTVPIAAEVFKKAGTYD 180

Query: 181 PKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPCSFTQEE 240
           PKKLLGVT LDV RANTFVAEVLGLDPR+VDVPVVGGHAGVTILPLLSQVKPP SFT +E
Sbjct: 181 PKKLLGVTTLDVARANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPPSSFTPQE 240

Query: 241 TEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECAFVASQV 300
            EYLTNRIQNGGTEVVEAKAGAGSATLSMAYAA KFADACLRGLRGDA VVEC+FVASQV
Sbjct: 241 IEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAAKFADACLRGLRGDANVVECSFVASQV 300

Query: 301 TELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSIQKGISFSKK 354
           TEL FFA+KVRLGR GAEE++QLGPLNEYERIGLEKAK ELAGSIQKG+ F +K
Sbjct: 301 TELAFFATKVRLGRTGAEEVYQLGPLNEYERIGLEKAKDELAGSIQKGVEFIRK 354

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 3

EC: 7

>sp|Q9XFW3|MDHG2_BRANA Malate dehydrogenase 2, glyoxysomal OS=Brassica napus GN=MDH2 PE=3 SV=1

 Score =  588 bits (1516), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 300/358 (83%), Positives = 324/358 (90%), Gaps = 4/358 (1%)

Query: 1   MEFSSEANQRIARISAHLYP---PNLQ-ENSCLRQAKCRAKGGAAGFKVAILGAAGGIGQ 56
           MEF  +AN+RIA ISAHL P   P ++ +NS + +  CRAKGG  GFKVAILGAAGGIGQ
Sbjct: 1   MEFRGDANKRIAMISAHLQPSFTPQMEAKNSVMGRENCRAKGGNPGFKVAILGAAGGIGQ 60

Query: 57  PLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVII 116
            L++LMK+NPLVS+LHLYDVVN PGVTAD+SHMDTGAVVRGFLG  QLE+ALTGMDLVII
Sbjct: 61  SLSLLMKMNPLVSLLHLYDVVNAPGVTADVSHMDTGAVVRGFLGAKQLEDALTGMDLVII 120

Query: 117 PAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKA 176
           PAGVPRKPGMTRDDLF INAGIV+TLCEG+AKCCPNA VNLISNPVNSTV IAAEVFKKA
Sbjct: 121 PAGVPRKPGMTRDDLFKINAGIVKTLCEGVAKCCPNAIVNLISNPVNSTVAIAAEVFKKA 180

Query: 177 GTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPCSF 236
           GTYDPKKLLGVT LDV RANTFVAEVLGLDPR+VDVPVVGGHAGVTILPLLSQVKPP SF
Sbjct: 181 GTYDPKKLLGVTTLDVARANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPPSSF 240

Query: 237 TQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECAFV 296
           T  E EYLTNRIQNGGTEVVEAKAGAGSATLSMAYAA KFADACLRGLRGDA V+EC+FV
Sbjct: 241 TPSEIEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAAKFADACLRGLRGDANVIECSFV 300

Query: 297 ASQVTELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSIQKGISFSKK 354
           ASQVTEL FFA+KVRLGR GAEE+FQLGPLNEYER+GLEKAK+ELAGSIQKG+ F +K
Sbjct: 301 ASQVTELAFFATKVRLGRTGAEEVFQLGPLNEYERVGLEKAKEELAGSIQKGVDFIRK 358

Brassica napus (taxid: 3708)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 3

EC: 7

>sp|Q43743|MDHG1_BRANA Malate dehydrogenase 1, glyoxysomal OS=Brassica napus GN=MDH1 PE=2 SV=2

 Score =  585 bits (1509), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 300/358 (83%), Positives = 322/358 (89%), Gaps = 4/358 (1%)

Query: 1   MEFSSEANQRIARISAHLYP---PNLQ-ENSCLRQAKCRAKGGAAGFKVAILGAAGGIGQ 56
           MEF  +A +RIA ISAHL P   P ++ +NS +    CRAKGG  GFKVAILGAAGGIGQ
Sbjct: 1   MEFRGDAYKRIAMISAHLQPSFTPQMEAKNSVMGLESCRAKGGNPGFKVAILGAAGGIGQ 60

Query: 57  PLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVII 116
            L++LMK+NPLVS+LHLYDVVN PGVTAD+SHMDTGAVVRGFLG  QLE+ALTGMDLVII
Sbjct: 61  SLSLLMKMNPLVSLLHLYDVVNAPGVTADVSHMDTGAVVRGFLGAKQLEDALTGMDLVII 120

Query: 117 PAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKA 176
           PAGVPRKPGMTRDDLF INAGIVRTLCEG+AKCCPNA VNLISNPVNSTV IAAEVFKKA
Sbjct: 121 PAGVPRKPGMTRDDLFKINAGIVRTLCEGVAKCCPNAIVNLISNPVNSTVAIAAEVFKKA 180

Query: 177 GTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPCSF 236
           GTYDPKKLLGVT LDV RANTFVAEVLGLDPR+VDVPVVGGHAGVTILPLLSQVKPP SF
Sbjct: 181 GTYDPKKLLGVTTLDVARANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPPSSF 240

Query: 237 TQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECAFV 296
           T  E EYLTNRIQNGGTEVVEAKAGAGSATLSMAYAA KFADACLRGLRGDA V+EC+FV
Sbjct: 241 TPSEIEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAAKFADACLRGLRGDANVIECSFV 300

Query: 297 ASQVTELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSIQKGISFSKK 354
           ASQVTEL FFA+KVRLGR GAEE+FQLGPLNEYER+GLEKAK+ELAGSIQKG+ F +K
Sbjct: 301 ASQVTELAFFATKVRLGRTGAEEVFQLGPLNEYERVGLEKAKEELAGSIQKGVDFIRK 358

Brassica napus (taxid: 3708)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 3

EC: 7

>sp|P17783|MDHM_CITLA Malate dehydrogenase, mitochondrial OS=Citrullus lanatus GN=MMDH PE=1 SV=1

 Score =  423 bits (1088), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 209/309 (67%), Positives = 245/309 (79%)

Query: 44  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQ 103
           KVA+LGAAGGIGQPLA+LMK+NPLVS L LYD+  TPGV AD+ H++T + V G++G+ Q
Sbjct: 36  KVAVLGAAGGIGQPLALLMKLNPLVSKLALYDIAGTPGVAADVGHVNTRSEVTGYVGEEQ 95

Query: 104 LENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVN 163
           L  AL G D+VIIPAGVPRKPGMTRDDLFNINAGIV++LC  IAK CPNA +N+ISNPVN
Sbjct: 96  LGKALEGSDVVIIPAGVPRKPGMTRDDLFNINAGIVKSLCTAIAKYCPNALINMISNPVN 155

Query: 164 STVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTI 223
           STVPIAAEVFKKAGTYD KKL GVT LDVVRA TF A    +   +V+VPV+GGHAG+TI
Sbjct: 156 STVPIAAEVFKKAGTYDEKKLFGVTTLDVVRAKTFYAGKANVPVAEVNVPVIGGHAGITI 215

Query: 224 LPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRG 283
           LPL SQ  P  + + +    LT R Q+GGTEVVEAKAG GSATLSMAYA   FADACL+G
Sbjct: 216 LPLFSQATPRANLSDDTIVALTKRTQDGGTEVVEAKAGKGSATLSMAYAGALFADACLKG 275

Query: 284 LRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAG 343
           L G   VVEC+FV S VTELPFFASKV+LG+ G E +  LGPL+++E+ GLEK K EL  
Sbjct: 276 LNGVPDVVECSFVQSTVTELPFFASKVKLGKNGVESVLDLGPLSDFEKEGLEKLKPELKA 335

Query: 344 SIQKGISFS 352
           SI+KGI F+
Sbjct: 336 SIEKGIQFA 344

Citrullus lanatus (taxid: 3654)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 3

EC: 7

>sp|Q9ZP06|MDHM1_ARATH Malate dehydrogenase 1, mitochondrial OS=Arabidopsis thaliana GN=At1g53240 PE=1 SV=1

 Score =  421 bits (1083), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 210/335 (62%), Positives = 253/335 (75%), Gaps = 3/335 (0%)

Query: 23  LQENSCLRQAKCR---AKGGAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT 79
           ++ ++  +QA  R   + G     KVAILGAAGGIGQPLA+LMK+NPLVS L LYD+ NT
Sbjct: 7   VRSSASAKQAVIRRSFSSGSVPERKVAILGAAGGIGQPLALLMKLNPLVSSLSLYDIANT 66

Query: 80  PGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIV 139
           PGV AD+ H++T + V G++G   L  AL G DLVIIPAGVPRKPGMTRDDLFNINAGIV
Sbjct: 67  PGVAADVGHINTRSEVVGYMGDDNLAKALEGADLVIIPAGVPRKPGMTRDDLFNINAGIV 126

Query: 140 RTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFV 199
           + LC  IAK CP+A +N+ISNPVNSTVPIAAE+FKKAG YD KKL GVT LDVVRA TF 
Sbjct: 127 KNLCTAIAKYCPHALINMISNPVNSTVPIAAEIFKKAGMYDEKKLFGVTTLDVVRARTFY 186

Query: 200 AEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAK 259
           A    +   +V+VPV+GGHAGVTILPL SQ  P  + + +    LT R Q+GGTEVVEAK
Sbjct: 187 AGKANVPVAEVNVPVIGGHAGVTILPLFSQATPQANLSSDILTALTKRTQDGGTEVVEAK 246

Query: 260 AGAGSATLSMAYAAVKFADACLRGLRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEE 319
           AG GSATLSMAYA   FADACL+GL G   V+EC++V S +TELPFFASKVRLG+ G EE
Sbjct: 247 AGKGSATLSMAYAGALFADACLKGLNGVPDVIECSYVQSTITELPFFASKVRLGKNGVEE 306

Query: 320 IFQLGPLNEYERIGLEKAKKELAGSIQKGISFSKK 354
           +  LGPL+++E+ GLE  K EL  SI+KG+ F+ +
Sbjct: 307 VLDLGPLSDFEKEGLEALKPELKSSIEKGVKFANQ 341

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 3

EC: 7

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	354
359475502	356	PREDICTED: malate dehydrogenase, glyoxys	1.0	0.994	0.907	0.0
255562058	356	malate dehydrogenase, putative [Ricinus	1.0	0.994	0.898	0.0
118489009	354	unknown [Populus trichocarpa x Populus d	0.994	0.994	0.892	0.0
224103817	354	predicted protein [Populus trichocarpa]	0.994	0.994	0.889	0.0
60593475	362	Chain A, Mature And Translocatable Forms	0.991	0.969	0.883	1e-180
126894	356	RecName: Full=Malate dehydrogenase, glyo	0.991	0.985	0.883	1e-180
158712040	354	malate dehydrogenase [Perilla frutescens	0.985	0.985	0.895	1e-180
224056321	356	predicted protein [Populus trichocarpa]	1.0	0.994	0.890	1e-180
1170897	356	RecName: Full=Malate dehydrogenase, glyo	0.997	0.991	0.878	1e-179
359496625	356	PREDICTED: malate dehydrogenase, glyoxys	1.0	0.994	0.884	1e-179

>gi|359475502|ref|XP_003631692.1| PREDICTED: malate dehydrogenase, glyoxysomal [Vitis vinifera] gi|147774268|emb|CAN65552.1| hypothetical protein VITISV_033330 [Vitis vinifera] gi|297736349|emb|CBI25072.3| unnamed protein product [Vitis vinifera]

 Score =  660 bits (1702), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 323/356 (90%), Positives = 341/356 (95%), Gaps = 2/356 (0%)

Query: 1   MEFSSEANQRIARISAHLYPP--NLQENSCLRQAKCRAKGGAAGFKVAILGAAGGIGQPL 58
           M+ ++EANQRIAR+SAHLYP    ++E+S LR+A CRAKGGA GFKVAILGAAGGIGQPL
Sbjct: 1   MQPTAEANQRIARLSAHLYPSVRQMEESSVLRRANCRAKGGAPGFKVAILGAAGGIGQPL 60

Query: 59  AMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA 118
           AMLMK+NPLVSVLHLYDVVN PGVTADISHMDTGAVVRGFLGQPQLE+ALTGMDLVIIPA
Sbjct: 61  AMLMKMNPLVSVLHLYDVVNAPGVTADISHMDTGAVVRGFLGQPQLESALTGMDLVIIPA 120

Query: 119 GVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGT 178
           GVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNA VNLISNPVNSTVPIAAEVFKKAGT
Sbjct: 121 GVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNAIVNLISNPVNSTVPIAAEVFKKAGT 180

Query: 179 YDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPCSFTQ 238
           YDPK+LLGVTMLDVVRANTFVAEVLGLDPR+VDVPVVGGH+GVTILPLLSQVKPPCSFT 
Sbjct: 181 YDPKRLLGVTMLDVVRANTFVAEVLGLDPREVDVPVVGGHSGVTILPLLSQVKPPCSFTP 240

Query: 239 EETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECAFVAS 298
           EET+YLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVEC FVAS
Sbjct: 241 EETQYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECTFVAS 300

Query: 299 QVTELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSIQKGISFSKK 354
           QVTELPFFA+KVRLGR GAEEI+QLGPLNEYER+GLEKAKKELAGSI KGISF +K
Sbjct: 301 QVTELPFFATKVRLGRSGAEEIYQLGPLNEYERVGLEKAKKELAGSIAKGISFIRK 356

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255562058|ref|XP_002522037.1| malate dehydrogenase, putative [Ricinus communis] gi|223538636|gb|EEF40237.1| malate dehydrogenase, putative [Ricinus communis]

 Score =  654 bits (1687), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 320/356 (89%), Positives = 338/356 (94%), Gaps = 2/356 (0%)

Query: 1   MEFSSEANQRIARISAHLYPPNLQE--NSCLRQAKCRAKGGAAGFKVAILGAAGGIGQPL 58
           M+ S+EA QRIARISAHL+PPN Q   +S L++A CRAKGG+ GFKVAILGAAGGIGQPL
Sbjct: 1   MDSSAEAAQRIARISAHLHPPNFQMEGSSALKRADCRAKGGSPGFKVAILGAAGGIGQPL 60

Query: 59  AMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA 118
           AMLMK+NPLVSVLHLYDVVN PGVTADISHMDTGAVVRGFLGQPQLENALTGMDLV+IPA
Sbjct: 61  AMLMKMNPLVSVLHLYDVVNAPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVVIPA 120

Query: 119 GVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGT 178
           GVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCP A VNLISNPVNSTVPIAAEVFKKAGT
Sbjct: 121 GVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPRAIVNLISNPVNSTVPIAAEVFKKAGT 180

Query: 179 YDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPCSFTQ 238
           YDPK+LLGVTMLDVVRANTFVAEVLGLDPR+VDVPVVGGHAGVTILPLLSQVKPPCSFT 
Sbjct: 181 YDPKRLLGVTMLDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPPCSFTS 240

Query: 239 EETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECAFVAS 298
           EETEYLT RIQ+GGTEVV+AKAGAGSATLSMAYAAVKFADACLRGLRGDAG+VEC+FVAS
Sbjct: 241 EETEYLTKRIQDGGTEVVQAKAGAGSATLSMAYAAVKFADACLRGLRGDAGIVECSFVAS 300

Query: 299 QVTELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSIQKGISFSKK 354
           QVTELPFFA+KVRLGR GAEE++QLGPLNEYERIGLEKAKKEL  SIQKGISF KK
Sbjct: 301 QVTELPFFATKVRLGRNGAEEVYQLGPLNEYERIGLEKAKKELEASIQKGISFIKK 356

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|118489009|gb|ABK96312.1| unknown [Populus trichocarpa x Populus deltoides]

 Score =  640 bits (1652), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 316/354 (89%), Positives = 333/354 (94%), Gaps = 2/354 (0%)

Query: 3   FSSEANQRIARISAHLYPPNLQ-ENSC-LRQAKCRAKGGAAGFKVAILGAAGGIGQPLAM 60
             S ANQRIAR+SAHL PPN Q E SC L++  CRAKGGA GFKVAILGAAGGIGQPLAM
Sbjct: 1   MESVANQRIARVSAHLQPPNSQMEESCVLKRTDCRAKGGAPGFKVAILGAAGGIGQPLAM 60

Query: 61  LMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGV 120
           LMK+NPLVSVLHLYDVVN PGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGV
Sbjct: 61  LMKMNPLVSVLHLYDVVNAPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGV 120

Query: 121 PRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYD 180
           PRKPGMTRDDLF INAGIVRTLCEG+AKCCPNA VNLISNPVNSTVPIAAEVFKKAGTYD
Sbjct: 121 PRKPGMTRDDLFKINAGIVRTLCEGVAKCCPNAIVNLISNPVNSTVPIAAEVFKKAGTYD 180

Query: 181 PKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPCSFTQEE 240
           PK+LLGVTMLDVVRANTFVAEVLGLDPR+VDVPVVGGHAGVTILPLLSQ KPP SFT EE
Sbjct: 181 PKRLLGVTMLDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQAKPPSSFTPEE 240

Query: 241 TEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECAFVASQV 300
           TEYLT RIQ+GGTEVV+AKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECAFVAS+V
Sbjct: 241 TEYLTKRIQDGGTEVVQAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECAFVASEV 300

Query: 301 TELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSIQKGISFSKK 354
           TELPFFA+KVRLGR+GAEE++QLGPLNEYER+GL+KAKKELA SIQKG SF +K
Sbjct: 301 TELPFFATKVRLGRRGAEEVYQLGPLNEYERVGLQKAKKELAESIQKGTSFIRK 354

Source: Populus trichocarpa x Populus deltoides

Species: Populus trichocarpa x Populus deltoides

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224103817|ref|XP_002313205.1| predicted protein [Populus trichocarpa] gi|118487242|gb|ABK95449.1| unknown [Populus trichocarpa] gi|222849613|gb|EEE87160.1| predicted protein [Populus trichocarpa]

 Score =  640 bits (1651), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 315/354 (88%), Positives = 334/354 (94%), Gaps = 2/354 (0%)

Query: 3   FSSEANQRIARISAHLYPPNLQ-ENSC-LRQAKCRAKGGAAGFKVAILGAAGGIGQPLAM 60
             S ANQRIAR+SAHL PPN Q E SC L++  CRAKGGA GFKVAILGAAGGIGQPLAM
Sbjct: 1   MESVANQRIARVSAHLQPPNSQMEESCVLKRTDCRAKGGAPGFKVAILGAAGGIGQPLAM 60

Query: 61  LMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGV 120
           LMK+NPLVSVLHLYDVVN PGVTADISHMDTGAVVRGFLGQPQLE+ALTGMDLVIIPAGV
Sbjct: 61  LMKMNPLVSVLHLYDVVNAPGVTADISHMDTGAVVRGFLGQPQLESALTGMDLVIIPAGV 120

Query: 121 PRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYD 180
           PRKPGMTRDDLF INAGIVRTLCEG+AKCCPNA VNLISNPVNSTVPIAAEVFKKAGTYD
Sbjct: 121 PRKPGMTRDDLFKINAGIVRTLCEGVAKCCPNAIVNLISNPVNSTVPIAAEVFKKAGTYD 180

Query: 181 PKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPCSFTQEE 240
           PK+LLGVTMLDVVRANTFVAEVLGLDPR+VDVPVVGGHAGVTILPLLSQ KPP SFT EE
Sbjct: 181 PKRLLGVTMLDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQAKPPSSFTPEE 240

Query: 241 TEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECAFVASQV 300
           TEYLT RIQ+GGTEVV+AKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECAF+AS+V
Sbjct: 241 TEYLTKRIQDGGTEVVQAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECAFIASEV 300

Query: 301 TELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSIQKGISFSKK 354
           TELPFFA+KVRLGR+GAEE++QLGPLNEYER+GL+KAKKELA SIQKGISF +K
Sbjct: 301 TELPFFATKVRLGRRGAEEVYQLGPLNEYERVGLQKAKKELAESIQKGISFIRK 354

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|60593475|pdb|1SEV|A Chain A, Mature And Translocatable Forms Of Glyoxysomal Malate Dehydrogenase Have Different Activities And Stabilities But Similar Crystal Structures gi|60593476|pdb|1SEV|B Chain B, Mature And Translocatable Forms Of Glyoxysomal Malate Dehydrogenase Have Different Activities And Stabilities But Similar Crystal Structures

 Score =  637 bits (1644), Expect = e-180,   Method: Compositional matrix adjust.
 Identities = 312/353 (88%), Positives = 331/353 (93%), Gaps = 2/353 (0%)

Query: 1   MEFSSEANQRIARISAHLYPP--NLQENSCLRQAKCRAKGGAAGFKVAILGAAGGIGQPL 58
           M+   + NQRIARISAHL+PP   ++E+S LR+A CRAKGGA GFKVAILGAAGGIGQPL
Sbjct: 1   MQPIPDVNQRIARISAHLHPPKSQMEESSALRRANCRAKGGAPGFKVAILGAAGGIGQPL 60

Query: 59  AMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA 118
           AMLMK+NPLVSVLHLYDVVN PGVTADISHMDTGAVVRGFLGQ QLE ALTGMDL+I+PA
Sbjct: 61  AMLMKMNPLVSVLHLYDVVNAPGVTADISHMDTGAVVRGFLGQQQLEAALTGMDLIIVPA 120

Query: 119 GVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGT 178
           GVPRKPGMTRDDLF INAGIV+TLCEGIAKCCP A VNLISNPVNSTVPIAAEVFKKAGT
Sbjct: 121 GVPRKPGMTRDDLFKINAGIVKTLCEGIAKCCPRAIVNLISNPVNSTVPIAAEVFKKAGT 180

Query: 179 YDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPCSFTQ 238
           YDPK+LLGVTMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPP SFTQ
Sbjct: 181 YDPKRLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPSSFTQ 240

Query: 239 EETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECAFVAS 298
           EE  YLT+RIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRGLRGDAGV+ECAFV+S
Sbjct: 241 EEISYLTDRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVIECAFVSS 300

Query: 299 QVTELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSIQKGISF 351
           QVTELPFFASKVRLGR G EE++ LGPLNEYERIGLEKAKKELAGSI+KG+SF
Sbjct: 301 QVTELPFFASKVRLGRNGIEEVYSLGPLNEYERIGLEKAKKELAGSIEKGVSF 353

Source: Citrullus lanatus

Species: Citrullus lanatus

Genus: Citrullus

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|126894|sp|P19446.1|MDHG_CITLA RecName: Full=Malate dehydrogenase, glyoxysomal; Flags: Precursor gi|167284|gb|AAA33041.1| glyoxysomal malate dehydrogenase precursor (EC 1.1.1.37) [Citrullus lanatus subsp. vulgaris]

 Score =  637 bits (1644), Expect = e-180,   Method: Compositional matrix adjust.
 Identities = 312/353 (88%), Positives = 331/353 (93%), Gaps = 2/353 (0%)

Query: 1   MEFSSEANQRIARISAHLYPP--NLQENSCLRQAKCRAKGGAAGFKVAILGAAGGIGQPL 58
           M+   + NQRIARISAHL+PP   ++E+S LR+A CRAKGGA GFKVAILGAAGGIGQPL
Sbjct: 1   MQPIPDVNQRIARISAHLHPPKSQMEESSALRRANCRAKGGAPGFKVAILGAAGGIGQPL 60

Query: 59  AMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA 118
           AMLMK+NPLVSVLHLYDVVN PGVTADISHMDTGAVVRGFLGQ QLE ALTGMDL+I+PA
Sbjct: 61  AMLMKMNPLVSVLHLYDVVNAPGVTADISHMDTGAVVRGFLGQQQLEAALTGMDLIIVPA 120

Query: 119 GVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGT 178
           GVPRKPGMTRDDLF INAGIV+TLCEGIAKCCP A VNLISNPVNSTVPIAAEVFKKAGT
Sbjct: 121 GVPRKPGMTRDDLFKINAGIVKTLCEGIAKCCPRAIVNLISNPVNSTVPIAAEVFKKAGT 180

Query: 179 YDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPCSFTQ 238
           YDPK+LLGVTMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPP SFTQ
Sbjct: 181 YDPKRLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPSSFTQ 240

Query: 239 EETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECAFVAS 298
           EE  YLT+RIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRGLRGDAGV+ECAFV+S
Sbjct: 241 EEISYLTDRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVIECAFVSS 300

Query: 299 QVTELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSIQKGISF 351
           QVTELPFFASKVRLGR G EE++ LGPLNEYERIGLEKAKKELAGSI+KG+SF
Sbjct: 301 QVTELPFFASKVRLGRNGIEEVYSLGPLNEYERIGLEKAKKELAGSIEKGVSF 353

Source: Citrullus lanatus subsp. vulgaris

Species: Citrullus lanatus

Genus: Citrullus

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|158712040|gb|ABW79813.1| malate dehydrogenase [Perilla frutescens]

 Score =  637 bits (1644), Expect = e-180,   Method: Compositional matrix adjust.
 Identities = 316/353 (89%), Positives = 331/353 (93%), Gaps = 4/353 (1%)

Query: 6   EANQRIARISAHLYPPNLQENS----CLRQAKCRAKGGAAGFKVAILGAAGGIGQPLAML 61
           EANQRIARISAHL+P N Q  S     LR A CRAKGGA GFKVAILGAAGGIGQPL+ML
Sbjct: 2   EANQRIARISAHLHPSNPQMGSEHHPILRAADCRAKGGAPGFKVAILGAAGGIGQPLSML 61

Query: 62  MKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVP 121
           MK+NPLVSVLHLYDVVN PGVTAD+SHMDTGAVVRGFLGQPQLE+ALTGMDLVIIPAGVP
Sbjct: 62  MKMNPLVSVLHLYDVVNAPGVTADVSHMDTGAVVRGFLGQPQLESALTGMDLVIIPAGVP 121

Query: 122 RKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDP 181
           RKPGMTRDDLFNINAGIVRTLCEGIAK CPNA VNLISNPVNSTVPIAAEVFKKAGTYDP
Sbjct: 122 RKPGMTRDDLFNINAGIVRTLCEGIAKSCPNAIVNLISNPVNSTVPIAAEVFKKAGTYDP 181

Query: 182 KKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPCSFTQEET 241
           KKLLGVTMLDVVRANTFVAEVLGLDPR+V VPVVGGHAGVTILPLLSQVKPPCSFT EET
Sbjct: 182 KKLLGVTMLDVVRANTFVAEVLGLDPREVSVPVVGGHAGVTILPLLSQVKPPCSFTPEET 241

Query: 242 EYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECAFVASQVT 301
           EYLT RIQ+GGTEVV+AKAGAGSATLSMAYAAVKFAD CLRGL+GDAG+VECAFVASQVT
Sbjct: 242 EYLTKRIQDGGTEVVQAKAGAGSATLSMAYAAVKFADLCLRGLKGDAGIVECAFVASQVT 301

Query: 302 ELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSIQKGISFSKK 354
           +LPFFA+KVRLGR GAEE+FQLGPLNEYER+GLEKAKKELA SIQKG+SF KK
Sbjct: 302 DLPFFATKVRLGRGGAEEVFQLGPLNEYERVGLEKAKKELAVSIQKGVSFIKK 354

Source: Perilla frutescens

Species: Perilla frutescens

Genus: Perilla

Family: Lamiaceae

Order: Lamiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224056321|ref|XP_002298801.1| predicted protein [Populus trichocarpa] gi|222846059|gb|EEE83606.1| predicted protein [Populus trichocarpa]

 Score =  637 bits (1643), Expect = e-180,   Method: Compositional matrix adjust.
 Identities = 317/356 (89%), Positives = 335/356 (94%), Gaps = 2/356 (0%)

Query: 1   MEFSSEANQRIARISAHLYPPNLQ-ENSC-LRQAKCRAKGGAAGFKVAILGAAGGIGQPL 58
           ME   EA+QRIARISAHL PPN Q E SC L++A CRAKGGA GFKVAILGAAGGIGQPL
Sbjct: 1   MESIREASQRIARISAHLQPPNSQTEESCVLKRADCRAKGGAPGFKVAILGAAGGIGQPL 60

Query: 59  AMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA 118
           AMLMK+NP VSVLHLYDVVNTPGVTADI HMDTGAVVRGFLGQPQLENALTGMDLVIIPA
Sbjct: 61  AMLMKMNPSVSVLHLYDVVNTPGVTADIGHMDTGAVVRGFLGQPQLENALTGMDLVIIPA 120

Query: 119 GVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGT 178
           GVPRKPGMTRDDLFNINAGIV TLCEGIAKCCPNA VNLISNPVNSTVPIAAEVFKKAGT
Sbjct: 121 GVPRKPGMTRDDLFNINAGIVITLCEGIAKCCPNAIVNLISNPVNSTVPIAAEVFKKAGT 180

Query: 179 YDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPCSFTQ 238
           YDPK+LLGVTMLDVVRANTFVAEVLGL P++VDVPVVGGHAGVTILPLLSQVKPP SFT 
Sbjct: 181 YDPKRLLGVTMLDVVRANTFVAEVLGLHPKEVDVPVVGGHAGVTILPLLSQVKPPSSFTP 240

Query: 239 EETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECAFVAS 298
           EETEYLT RIQ+GGTEVV+AKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECAFVAS
Sbjct: 241 EETEYLTKRIQDGGTEVVQAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECAFVAS 300

Query: 299 QVTELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSIQKGISFSKK 354
           +VTELPFFA+KVRLGR+GAEE++QLGPLNEYER+GL +AKKELA SIQKG+SF +K
Sbjct: 301 EVTELPFFATKVRLGRRGAEEVYQLGPLNEYERVGLGRAKKELAESIQKGVSFIRK 356

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|1170897|sp|P46488.1|MDHG_CUCSA RecName: Full=Malate dehydrogenase, glyoxysomal; Flags: Precursor gi|695311|gb|AAC41647.1| glyoxysomal malate dehydrogenase [Cucumis sativus]

 Score =  635 bits (1637), Expect = e-179,   Method: Compositional matrix adjust.
 Identities = 312/355 (87%), Positives = 331/355 (93%), Gaps = 2/355 (0%)

Query: 1   MEFSSEANQRIARISAHLYPPNLQ--ENSCLRQAKCRAKGGAAGFKVAILGAAGGIGQPL 58
           M+   + NQRIARISAHL+PP  Q  E+S LR+A CRAKGGA GFKVAILGAAGGIGQPL
Sbjct: 1   MQPIPDVNQRIARISAHLHPPKYQMEESSVLRRANCRAKGGAPGFKVAILGAAGGIGQPL 60

Query: 59  AMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA 118
           AMLMK+NPLVSVLHLYDVVN PGVTADISHMDTGAVVRGFLGQ QLE ALTGMDLV+IPA
Sbjct: 61  AMLMKMNPLVSVLHLYDVVNAPGVTADISHMDTGAVVRGFLGQQQLERALTGMDLVVIPA 120

Query: 119 GVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGT 178
           GVPRKPGMTRDDLF INAGIV+TLCEGIAKCCP A VNLISNPVNSTVPIAAEVFKKAGT
Sbjct: 121 GVPRKPGMTRDDLFKINAGIVKTLCEGIAKCCPTAIVNLISNPVNSTVPIAAEVFKKAGT 180

Query: 179 YDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPCSFTQ 238
           YDPK+LLGVTMLDVVRANTFVAEVLGLDPRDV+VPVVGGHAGVTILPLLSQVKPP SFTQ
Sbjct: 181 YDPKRLLGVTMLDVVRANTFVAEVLGLDPRDVNVPVVGGHAGVTILPLLSQVKPPSSFTQ 240

Query: 239 EETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECAFVAS 298
           EE  YLT+RIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECAFV+S
Sbjct: 241 EEINYLTDRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECAFVSS 300

Query: 299 QVTELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSIQKGISFSK 353
           QVTELPFFA+KVRLGR G +E++ LGPLNEYERIGLEKAKKELAGSI+KG+SF +
Sbjct: 301 QVTELPFFATKVRLGRNGIDEVYSLGPLNEYERIGLEKAKKELAGSIEKGVSFIR 355

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359496625|ref|XP_002263670.2| PREDICTED: malate dehydrogenase, glyoxysomal [Vitis vinifera] gi|297739396|emb|CBI29427.3| unnamed protein product [Vitis vinifera]

 Score =  634 bits (1636), Expect = e-179,   Method: Compositional matrix adjust.
 Identities = 315/356 (88%), Positives = 332/356 (93%), Gaps = 2/356 (0%)

Query: 1   MEFSSEANQRIARISAHLYPPNLQ--ENSCLRQAKCRAKGGAAGFKVAILGAAGGIGQPL 58
           M  +S+ANQRIARISAHL P N Q  E+S L +  CRAKGGA GFKVAILGAAGGIGQPL
Sbjct: 1   MHPTSDANQRIARISAHLQPSNFQMGESSGLSRENCRAKGGAPGFKVAILGAAGGIGQPL 60

Query: 59  AMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA 118
           AMLMK+NPLVSVLHLYDVVNTPGVT+DISHMDTGAVVRGFLGQ QLE+ALTGMDLVIIPA
Sbjct: 61  AMLMKMNPLVSVLHLYDVVNTPGVTSDISHMDTGAVVRGFLGQQQLEDALTGMDLVIIPA 120

Query: 119 GVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGT 178
           GVPRKPGMTRDDLFNINAGIV+TLCEGIAKCCPNA VNLISNPVNSTVPIAAEVFKKAGT
Sbjct: 121 GVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPNAIVNLISNPVNSTVPIAAEVFKKAGT 180

Query: 179 YDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPCSFTQ 238
           +DPK+LLGVTMLDVVRANTFVAEVLGLDPR+VDVPVVGGHAGVTILPLLSQVKPPCSFT 
Sbjct: 181 FDPKRLLGVTMLDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPPCSFTP 240

Query: 239 EETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECAFVAS 298
           EE +YLT RIQNGGTEVVEAKAGAGSATLSMAYAAVKFAD CLRGLRGDAGV++CA+V S
Sbjct: 241 EEIDYLTARIQNGGTEVVEAKAGAGSATLSMAYAAVKFADTCLRGLRGDAGVIQCAYVFS 300

Query: 299 QVTELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSIQKGISFSKK 354
           QVTELPFFASKVRLGR GAEEI+ LGPLNEYER GLEKAKKELA SIQKGISF +K
Sbjct: 301 QVTELPFFASKVRLGRTGAEEIYPLGPLNEYERAGLEKAKKELASSIQKGISFIRK 356

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	354
TAIR|locus:2062240	354	PMDH1 "peroxisomal NAD-malate	0.985	0.985	0.813	1.2e-147
TAIR|locus:2144781	363	PMDH2 "peroxisomal NAD-malate	0.847	0.826	0.81	2.4e-124
TAIR|locus:2009605	341	mMDH1 "mitochondrial malate de	0.937	0.973	0.608	1.6e-102
TAIR|locus:2086340	341	mMDH2 "mitochondrial malate de	0.878	0.912	0.646	8.8e-102
TAIR|locus:2079177	403	MDH "malate dehydrogenase" [Ar	0.887	0.779	0.604	4.1e-97
FB|FBgn0262559	336	Mdh2 "Malate dehydrogenase 2"	0.889	0.937	0.555	1.8e-87
UNIPROTKB|E1BVT3	337	MDH2 "Malate dehydrogenase" [G	0.903	0.949	0.540	2e-86
UNIPROTKB|I3LP41	338	MDH2 "Malate dehydrogenase" [S	0.875	0.917	0.548	2.4e-85
UNIPROTKB|P00346	338	MDH2 "Malate dehydrogenase, mi	0.875	0.917	0.548	2.4e-85
WB|WBGene00003162	341	mdh-2 [Caenorhabditis elegans	0.918	0.953	0.541	4.9e-85

TAIR|locus:2062240 PMDH1 "peroxisomal NAD-malate dehydrogenase 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 1442 (512.7 bits), Expect = 1.2e-147, P = 1.2e-147
 Identities = 287/353 (81%), Positives = 308/353 (87%)

Query:     6 EANQRIARISAHLYPPNLQ----ENSCLRQAKCRAKGGAAGFKVAILGAAGGIGQPLAML 61
             + NQRIARISAHL PPNL     + S L +  CRAKGG+ GFKVAILGAAGGIGQPLAML
Sbjct:     2 DPNQRIARISAHLNPPNLHNQIADGSGLNRVACRAKGGSPGFKVAILGAAGGIGQPLAML 61

Query:    62 MKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVP 121
             MK+NPLVSVLHLYDV N PGVTADISHMDT AVVRGFLGQPQLE ALTGMDLVIIPAGVP
Sbjct:    62 MKMNPLVSVLHLYDVANAPGVTADISHMDTSAVVRGFLGQPQLEEALTGMDLVIIPAGVP 121

Query:   122 RKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDP 181
             RKPGMTRDDLFNINAGIVRTL E IAKCCP A VN+ISNPVNSTVPIAAEVFKKAGT+DP
Sbjct:   122 RKPGMTRDDLFNINAGIVRTLSEAIAKCCPKAIVNIISNPVNSTVPIAAEVFKKAGTFDP 181

Query:   182 KKLLGVTMLDVVRANTFVAEXXXXXXXXXXXXXXXXHAGVTILPLLSQVKPPCSFTQEET 241
             KKL+GVTMLDVVRANTFVAE                HAGVTILPLLSQVKPPCSFTQ+E 
Sbjct:   182 KKLMGVTMLDVVRANTFVAEVMSLDPREVEVPVVGGHAGVTILPLLSQVKPPCSFTQKEI 241

Query:   242 EYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECAFVASQVT 301
             EYLT+RIQNGGTEVVEAKAGAGSATLSMAYAAV+FADACLRGLRGDA +VECA+VAS VT
Sbjct:   242 EYLTDRIQNGGTEVVEAKAGAGSATLSMAYAAVEFADACLRGLRGDANIVECAYVASHVT 301

Query:   302 ELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSIQKGISFSKK 354
             ELPFFASKVRLGR G +E++ LGPLNEYER+GLEKAKKEL+ SI KG++F+KK
Sbjct:   302 ELPFFASKVRLGRCGIDEVYGLGPLNEYERMGLEKAKKELSVSIHKGVTFAKK 354

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0005975 "carbohydrate metabolic process" evidence=IEA

GO:0006108 "malate metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0016615 "malate dehydrogenase activity" evidence=IEA;ISS

GO:0016616 "oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor" evidence=IEA

GO:0030060 "L-malate dehydrogenase activity" evidence=IEA

GO:0044262 "cellular carbohydrate metabolic process" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0005777 "peroxisome" evidence=IDA

GO:0031998 "regulation of fatty acid beta-oxidation" evidence=IGI;IMP

GO:0009507 "chloroplast" evidence=IDA

GO:0080093 "regulation of photorespiration" evidence=IMP

GO:0006635 "fatty acid beta-oxidation" evidence=RCA

GO:0007031 "peroxisome organization" evidence=RCA

GO:0009062 "fatty acid catabolic process" evidence=RCA

TAIR|locus:2144781 PMDH2 "peroxisomal NAD-malate dehydrogenase 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 1222 (435.2 bits), Expect = 2.4e-124, P = 2.4e-124
 Identities = 243/300 (81%), Positives = 258/300 (86%)

Query:     1 MEFSSEANQRIARISAHLYPPNLQENSCLRQAKCRAKGGAAGFKVAILGAAGGIGQPLAM 60
             MEF  +ANQRIARISAHL P    +NS + +  CRAKGG  GFKVAILGAAGGIGQ L++
Sbjct:     1 MEFRGDANQRIARISAHLTPQMEAKNSVIGRENCRAKGGNPGFKVAILGAAGGIGQSLSL 60

Query:    61 LMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGV 120
             LMK+NPLVS+LHLYDVVN PGVTAD+SHMDTGAVVRGFLG  QLE+ALTGMDLVIIPAG+
Sbjct:    61 LMKMNPLVSLLHLYDVVNAPGVTADVSHMDTGAVVRGFLGAKQLEDALTGMDLVIIPAGI 120

Query:   121 PRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYD 180
             PRKPGMTRDDLF INAGIV+TLCEG+AKCCPNA VNLISNPVNSTVPIAAEVFKKAGTYD
Sbjct:   121 PRKPGMTRDDLFKINAGIVKTLCEGVAKCCPNAIVNLISNPVNSTVPIAAEVFKKAGTYD 180

Query:   181 PKKLLGVTMLDVVRANTFVAEXXXXXXXXXXXXXXXXHAGVTILPLLSQVKPPCSFTQEE 240
             PKKLLGVT LDV RANTFVAE                HAGVTILPLLSQVKPP SFT +E
Sbjct:   181 PKKLLGVTTLDVARANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPPSSFTPQE 240

Query:   241 TEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECAFVASQV 300
              EYLTNRIQNGGTEVVEAKAGAGSATLSMAYAA KFADACLRGLRGDA VVEC+FVASQV
Sbjct:   241 IEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAAKFADACLRGLRGDANVVECSFVASQV 300

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0005975 "carbohydrate metabolic process" evidence=IEA

GO:0006108 "malate metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0016615 "malate dehydrogenase activity" evidence=IEA;ISS

GO:0016616 "oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor" evidence=IEA

GO:0030060 "L-malate dehydrogenase activity" evidence=IEA

GO:0044262 "cellular carbohydrate metabolic process" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0009941 "chloroplast envelope" evidence=IDA

GO:0009507 "chloroplast" evidence=IDA

GO:0005773 "vacuole" evidence=IDA

GO:0005777 "peroxisome" evidence=IDA

GO:0031998 "regulation of fatty acid beta-oxidation" evidence=IGI;IMP

GO:0048046 "apoplast" evidence=IDA

GO:0080093 "regulation of photorespiration" evidence=IMP

GO:0000096 "sulfur amino acid metabolic process" evidence=RCA

GO:0000165 "MAPK cascade" evidence=RCA

GO:0006098 "pentose-phosphate shunt" evidence=RCA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=RCA

GO:0006364 "rRNA processing" evidence=RCA

GO:0006546 "glycine catabolic process" evidence=RCA

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0006636 "unsaturated fatty acid biosynthetic process" evidence=RCA

GO:0006655 "phosphatidylglycerol biosynthetic process" evidence=RCA

GO:0006733 "oxidoreduction coenzyme metabolic process" evidence=RCA

GO:0006766 "vitamin metabolic process" evidence=RCA

GO:0008652 "cellular amino acid biosynthetic process" evidence=RCA

GO:0009072 "aromatic amino acid family metabolic process" evidence=RCA

GO:0009106 "lipoate metabolic process" evidence=RCA

GO:0009108 "coenzyme biosynthetic process" evidence=RCA

GO:0009117 "nucleotide metabolic process" evidence=RCA

GO:0009416 "response to light stimulus" evidence=RCA

GO:0009617 "response to bacterium" evidence=RCA

GO:0009657 "plastid organization" evidence=RCA

GO:0009695 "jasmonic acid biosynthetic process" evidence=RCA

GO:0009853 "photorespiration" evidence=RCA

GO:0009862 "systemic acquired resistance, salicylic acid mediated signaling pathway" evidence=RCA

GO:0009867 "jasmonic acid mediated signaling pathway" evidence=RCA

GO:0009902 "chloroplast relocation" evidence=RCA

GO:0009965 "leaf morphogenesis" evidence=RCA

GO:0010103 "stomatal complex morphogenesis" evidence=RCA

GO:0010207 "photosystem II assembly" evidence=RCA

GO:0010304 "PSII associated light-harvesting complex II catabolic process" evidence=RCA

GO:0010310 "regulation of hydrogen peroxide metabolic process" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

GO:0015994 "chlorophyll metabolic process" evidence=RCA

GO:0015995 "chlorophyll biosynthetic process" evidence=RCA

GO:0016117 "carotenoid biosynthetic process" evidence=RCA

GO:0019216 "regulation of lipid metabolic process" evidence=RCA

GO:0019288 "isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway" evidence=RCA

GO:0019748 "secondary metabolic process" evidence=RCA

GO:0030154 "cell differentiation" evidence=RCA

GO:0031348 "negative regulation of defense response" evidence=RCA

GO:0031408 "oxylipin biosynthetic process" evidence=RCA

GO:0035304 "regulation of protein dephosphorylation" evidence=RCA

GO:0043085 "positive regulation of catalytic activity" evidence=RCA

GO:0044242 "cellular lipid catabolic process" evidence=RCA

GO:0044272 "sulfur compound biosynthetic process" evidence=RCA

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=RCA

GO:0042579 "microbody" evidence=ISS

TAIR|locus:2009605 mMDH1 "mitochondrial malate dehydrogenase 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 1016 (362.7 bits), Expect = 1.6e-102, P = 1.6e-102
 Identities = 204/335 (60%), Positives = 243/335 (72%)

Query:    23 LQENSCLRQAKCR---AKGGAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT 79
             ++ ++  +QA  R   + G     KVAILGAAGGIGQPLA+LMK+NPLVS L LYD+ NT
Sbjct:     7 VRSSASAKQAVIRRSFSSGSVPERKVAILGAAGGIGQPLALLMKLNPLVSSLSLYDIANT 66

Query:    80 PGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIV 139
             PGV AD+ H++T + V G++G   L  AL G DLVIIPAGVPRKPGMTRDDLFNINAGIV
Sbjct:    67 PGVAADVGHINTRSEVVGYMGDDNLAKALEGADLVIIPAGVPRKPGMTRDDLFNINAGIV 126

Query:   140 RTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFV 199
             + LC  IAK CP+A +N+ISNPVNSTVPIAAE+FKKAG YD KKL GVT LDVVRA TF 
Sbjct:   127 KNLCTAIAKYCPHALINMISNPVNSTVPIAAEIFKKAGMYDEKKLFGVTTLDVVRARTFY 186

Query:   200 AEXXXXXXXXXXXXXXXXHAGVTILPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAK 259
             A                 HAGVTILPL SQ  P  + + +    LT R Q+GGTEVVEAK
Sbjct:   187 AGKANVPVAEVNVPVIGGHAGVTILPLFSQATPQANLSSDILTALTKRTQDGGTEVVEAK 246

Query:   260 AGAGSATLSMAYAAVKFADACLRGLRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEE 319
             AG GSATLSMAYA   FADACL+GL G   V+EC++V S +TELPFFASKVRLG+ G EE
Sbjct:   247 AGKGSATLSMAYAGALFADACLKGLNGVPDVIECSYVQSTITELPFFASKVRLGKNGVEE 306

Query:   320 IFQLGPLNEYERIGLEKAKKELAGSIQKGISFSKK 354
             +  LGPL+++E+ GLE  K EL  SI+KG+ F+ +
Sbjct:   307 VLDLGPLSDFEKEGLEALKPELKSSIEKGVKFANQ 341

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0005739 "mitochondrion" evidence=ISM;IDA

GO:0005975 "carbohydrate metabolic process" evidence=IEA

GO:0006108 "malate metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0016615 "malate dehydrogenase activity" evidence=IEA

GO:0016616 "oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor" evidence=IEA

GO:0030060 "L-malate dehydrogenase activity" evidence=IEA;IMP

GO:0044262 "cellular carbohydrate metabolic process" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0009409 "response to cold" evidence=IEP

GO:0005618 "cell wall" evidence=IDA

GO:0046686 "response to cadmium ion" evidence=IEP;RCA

GO:0042742 "defense response to bacterium" evidence=IEP

GO:0009651 "response to salt stress" evidence=IEP;RCA

GO:0009507 "chloroplast" evidence=IDA

GO:0005507 "copper ion binding" evidence=IDA

GO:0005829 "cytosol" evidence=RCA

GO:0048046 "apoplast" evidence=IDA

GO:0005794 "Golgi apparatus" evidence=RCA

GO:0006094 "gluconeogenesis" evidence=RCA

GO:0006096 "glycolysis" evidence=RCA

GO:0006833 "water transport" evidence=RCA

GO:0006972 "hyperosmotic response" evidence=RCA

GO:0007030 "Golgi organization" evidence=RCA

GO:0009266 "response to temperature stimulus" evidence=RCA

TAIR|locus:2086340 mMDH2 "mitochondrial malate dehydrogenase 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 1009 (360.2 bits), Expect = 8.8e-102, P = 8.8e-102
 Identities = 201/311 (64%), Positives = 231/311 (74%)

Query:    44 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQ 103
             KV ILGAAGGIGQPL++LMK+NPLVS L LYD+ NTPGV AD+ H++T + V G++G   
Sbjct:    31 KVVILGAAGGIGQPLSLLMKLNPLVSSLSLYDIANTPGVAADVGHINTRSQVSGYMGDDD 90

Query:   104 LENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVN 163
             L  AL G DLVIIPAGVPRKPGMTRDDLFNINAGIV+ L   IAK CP A VN+ISNPVN
Sbjct:    91 LGKALEGADLVIIPAGVPRKPGMTRDDLFNINAGIVKNLSIAIAKYCPQALVNMISNPVN 150

Query:   164 STVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEXXXXXXXXXXXXXXXXHAGVTI 223
             STVPIAAE+FKKAGTYD KKL GVT LDVVRA TF A                 HAG+TI
Sbjct:   151 STVPIAAEIFKKAGTYDEKKLFGVTTLDVVRARTFYAGKSDVNVAEVNVPVVGGHAGITI 210

Query:   224 LPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRG 283
             LPL SQ  P  + + +    LT R Q+GGTEVVEAKAG GSATLSMAYA   FADACL+G
Sbjct:   211 LPLFSQASPQANLSDDLIRALTKRTQDGGTEVVEAKAGKGSATLSMAYAGALFADACLKG 270

Query:   284 LRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAG 343
             L G   VVEC+FV S +TELPFFASKVRLG+ G EE+  LGPL+++E+ GLE  K EL  
Sbjct:   271 LNGVPNVVECSFVQSTITELPFFASKVRLGKNGVEEVLDLGPLSDFEKEGLEALKAELKS 330

Query:   344 SIQKGISFSKK 354
             SI+KGI F+ +
Sbjct:   331 SIEKGIKFANQ 341

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0005739 "mitochondrion" evidence=ISM;IDA

GO:0005975 "carbohydrate metabolic process" evidence=IEA

GO:0006108 "malate metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0016615 "malate dehydrogenase activity" evidence=IEA;ISS

GO:0016616 "oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor" evidence=IEA

GO:0030060 "L-malate dehydrogenase activity" evidence=IEA;IGI

GO:0044262 "cellular carbohydrate metabolic process" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0042742 "defense response to bacterium" evidence=IEP

GO:0016020 "membrane" evidence=IDA

GO:0048046 "apoplast" evidence=IDA

GO:0005507 "copper ion binding" evidence=IDA

GO:0005829 "cytosol" evidence=RCA

GO:0009853 "photorespiration" evidence=RCA

TAIR|locus:2079177 MDH "malate dehydrogenase" [Arabidopsis thaliana (taxid:3702)]

 Score = 965 (344.8 bits), Expect = 4.1e-97, P = 4.1e-97
 Identities = 191/316 (60%), Positives = 237/316 (75%)

Query:    41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLG 100
             A +KVA+LGAAGGIGQPL++L+K++PLVS LHLYD+ N  GV AD+SH +T + VR F G
Sbjct:    81 ASYKVAVLGAAGGIGQPLSLLIKMSPLVSTLHLYDIANVKGVAADLSHCNTPSQVRDFTG 140

Query:   101 QPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISN 160
               +L + L  +++V+IPAGVPRKPGMTRDDLFNINA IV+TL E +A+ CPNA +++ISN
Sbjct:   141 PSELADCLKDVNVVVIPAGVPRKPGMTRDDLFNINANIVKTLVEAVAENCPNAFIHIISN 200

Query:   161 PVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEXXXXXXXXXXXXXXXXHAG 220
             PVNSTVPIAAEV KK G YDPKKL GVT LDVVRANTFV++                HAG
Sbjct:   201 PVNSTVPIAAEVLKKKGVYDPKKLFGVTTLDVVRANTFVSQKKNLKLIDVDVPVIGGHAG 260

Query:   221 VTILPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADAC 280
             +TILPLLS+ KP  +FT EE + LT RIQN GTEVV+AKAGAGSATLSMAYAA +F ++ 
Sbjct:   261 ITILPLLSKTKPSVNFTDEEIQELTVRIQNAGTEVVDAKAGAGSATLSMAYAAARFVESS 320

Query:   281 LRGLRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQ--LGPLNEYERIGLEKAK 338
             LR L GD  V EC+FV S +T+LPFFAS+V++G+ G E + +  L  L EYE+  LE  K
Sbjct:   321 LRALDGDGDVYECSFVESTLTDLPFFASRVKIGKNGLEAVIESDLQGLTEYEQKALEALK 380

Query:   339 KELAGSIQKGISFSKK 354
              EL  SI KG++F+ K
Sbjct:   381 VELKASIDKGVAFANK 396

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0005975 "carbohydrate metabolic process" evidence=IEA

GO:0006108 "malate metabolic process" evidence=IEA

GO:0009507 "chloroplast" evidence=ISM;IDA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0016615 "malate dehydrogenase activity" evidence=IEA;ISS

GO:0016616 "oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor" evidence=IEA

GO:0030060 "L-malate dehydrogenase activity" evidence=IEA;IDA

GO:0044262 "cellular carbohydrate metabolic process" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0009941 "chloroplast envelope" evidence=IDA

GO:0005739 "mitochondrion" evidence=IDA

GO:0009570 "chloroplast stroma" evidence=IDA

GO:0009409 "response to cold" evidence=IEP

GO:0010319 "stromule" evidence=IDA

GO:0005774 "vacuolar membrane" evidence=IDA

GO:0016020 "membrane" evidence=IDA

GO:0048046 "apoplast" evidence=IDA

GO:0009536 "plastid" evidence=IDA

FB|FBgn0262559 Mdh2 "Malate dehydrogenase 2" [Drosophila melanogaster (taxid:7227)]

 Score = 874 (312.7 bits), Expect = 1.8e-87, P = 1.8e-87
 Identities = 175/315 (55%), Positives = 223/315 (70%)

Query:    38 GGAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRG 97
             G    +KV + GAAGGIGQPL++L+K NPLV+ L LYD+V+TPGV AD+SH+DT +   G
Sbjct:    20 GQQNNYKVTVCGAAGGIGQPLSLLLKQNPLVTDLALYDIVHTPGVAADLSHIDTKSKTAG 79

Query:    98 FLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNL 157
             F+G  QL ++L G D+V+IPAGVPRKPGMTRDDLFN+NAGI++ +   IAK CP A V +
Sbjct:    80 FIGADQLGDSLKGSDVVVIPAGVPRKPGMTRDDLFNVNAGIIKDISNSIAKNCPKALVAI 139

Query:   158 ISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEXXXXXXXXXXXXXXXX 217
             I+NPVN+ VPIAAE+ KKAG YDPK+L GV+ LDVVRA  F+                  
Sbjct:   140 ITNPVNTCVPIAAEILKKAGVYDPKRLFGVSTLDVVRARAFIGHALGVDPQTVQIPVIGG 199

Query:   218 HAGVTILPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFA 277
             H+GVTILP+LSQ +P     Q+  E LT RIQ  GTEVV+AKAGAGSATLSMAYA  +FA
Sbjct:   200 HSGVTILPVLSQSQPLFKGNQDTIEKLTVRIQEAGTEVVKAKAGAGSATLSMAYAGARFA 259

Query:   278 DACLRGLRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKA 337
              + L+GL G+  V+EC++V S VTE  FF++ + LG+ G +E   L  LN+YE+  LE A
Sbjct:   260 GSLLKGLNGEKNVIECSYVQSTVTEATFFSTPLVLGKNGVQENLGLPKLNDYEKKLLEAA 319

Query:   338 KKELAGSIQKGISFS 352
               EL  +IQKGI F+
Sbjct:   320 IPELKKNIQKGIDFA 334

GO:0005739 "mitochondrion" evidence=IDA;TAS

GO:0030060 "L-malate dehydrogenase activity" evidence=ISS;TAS

GO:0005759 "mitochondrial matrix" evidence=ISS

GO:0006099 "tricarboxylic acid cycle" evidence=ISS;IDA

GO:0000166 "nucleotide binding" evidence=IEA

GO:0006108 "malate metabolic process" evidence=IEA

GO:0044262 "cellular carbohydrate metabolic process" evidence=IEA

GO:0005811 "lipid particle" evidence=IDA

GO:0043067 "regulation of programmed cell death" evidence=IMP

GO:0035070 "salivary gland histolysis" evidence=IMP

GO:0016615 "malate dehydrogenase activity" evidence=IDA

GO:0043068 "positive regulation of programmed cell death" evidence=IMP

GO:0006919 "activation of cysteine-type endopeptidase activity involved in apoptotic process" evidence=IMP

GO:0035209 "pupal development" evidence=IMP

UNIPROTKB|E1BVT3 MDH2 "Malate dehydrogenase" [Gallus gallus (taxid:9031)]

 Score = 864 (309.2 bits), Expect = 2.0e-86, P = 2.0e-86
 Identities = 174/322 (54%), Positives = 222/322 (68%)

Query:    34 CRAKGGAA--GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDT 91
             CR    +A    KVA+LGA+GGIGQPL++L+K +PLVS L LYD+ +TPGV AD+SH++T
Sbjct:    13 CRGLATSAQNNAKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVAADLSHIET 72

Query:    92 GAVVRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCP 151
              A V+GFLG  QL   L G D+V+IPAGVPRKPGMTRDDLFN NA IV TL    AK CP
Sbjct:    73 RANVKGFLGPEQLPECLKGCDVVVIPAGVPRKPGMTRDDLFNTNASIVATLTTACAKHCP 132

Query:   152 NATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEXXXXXXXXXX 211
              A + +ISNPVNST+PI +EVFKK G Y+P ++ GVT LD+VRANTFVAE          
Sbjct:   133 EAMICIISNPVNSTIPITSEVFKKHGVYNPNRIFGVTTLDIVRANTFVAELKGLDPARVS 192

Query:   212 XXXXXXHAGVTILPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAY 271
                   HAG TI+PL+SQ  P   F Q++ E LT RIQ  GTEVV+AKAGAGSATLSMAY
Sbjct:   193 VPVIGGHAGKTIIPLISQCTPKVDFPQDQLEKLTGRIQEAGTEVVKAKAGAGSATLSMAY 252

Query:   272 AAVKFADACLRGLRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQLGPLNEYER 331
             A  +F  + +  + G  GV+EC+FV S+ TE P+F++ + LG+ G E+   +G +  +E 
Sbjct:   253 AGARFVFSLVDAMNGKEGVIECSFVRSEETESPYFSTPLLLGKNGIEKNLGIGKITPFEE 312

Query:   332 IGLEKAKKELAGSIQKGISFSK 353
               + +A  EL  SI+KG  F+K
Sbjct:   313 KMVAEAMAELKASIKKGEDFAK 334

GO:0000166 "nucleotide binding" evidence=IEA

GO:0006108 "malate metabolic process" evidence=IEA

GO:0044262 "cellular carbohydrate metabolic process" evidence=IEA

GO:0006099 "tricarboxylic acid cycle" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0005743 "mitochondrial inner membrane" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

GO:0006475 "internal protein amino acid acetylation" evidence=IEA

GO:0030060 "L-malate dehydrogenase activity" evidence=IEA

UNIPROTKB|I3LP41 MDH2 "Malate dehydrogenase" [Sus scrofa (taxid:9823)]

 Score = 854 (305.7 bits), Expect = 2.4e-85, P = 2.4e-85
 Identities = 170/310 (54%), Positives = 219/310 (70%)

Query:    44 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQ 103
             KVA+LGA+GGIGQPL++L+K +PLVS L LYD+ +TPGV AD+SH++T A V+G+LG  Q
Sbjct:    26 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVAADLSHIETRATVKGYLGPEQ 85

Query:   104 LENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVN 163
             L + L G D+V+IPAGVPRKPGMTRDDLFN NA IV TL    A+ CP+A + +ISNPVN
Sbjct:    86 LPDCLKGCDVVVIPAGVPRKPGMTRDDLFNTNATIVATLTAACAQHCPDAMICIISNPVN 145

Query:   164 STVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEXXXXXXXXXXXXXXXXHAGVTI 223
             ST+PI AEVFKK G Y+P K+ GVT LD+VRAN FVAE                HAG TI
Sbjct:   146 STIPITAEVFKKHGVYNPNKIFGVTTLDIVRANAFVAELKGLDPARVSVPVIGGHAGKTI 205

Query:   224 LPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRG 283
             +PL+SQ  P   F Q++   LT RIQ  GTEVV+AKAGAGSATLSMAYA  +F  + +  
Sbjct:   206 IPLISQCTPKVDFPQDQLSTLTGRIQEAGTEVVKAKAGAGSATLSMAYAGARFVFSLVDA 265

Query:   284 LRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAG 343
             + G  GVVEC+FV SQ T+ P+F++ + LG++G E+   +G ++ +E   + +A  EL  
Sbjct:   266 MNGKEGVVECSFVKSQETDCPYFSTPLLLGKKGIEKNLGIGKISPFEEKMIAEAIPELKA 325

Query:   344 SIQKGISFSK 353
             SI+KG  F K
Sbjct:   326 SIKKGEEFVK 335

GO:0030060 "L-malate dehydrogenase activity" evidence=IEA

GO:0006099 "tricarboxylic acid cycle" evidence=IEA

GO:0044262 "cellular carbohydrate metabolic process" evidence=IEA

GO:0006108 "malate metabolic process" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

UNIPROTKB|P00346 MDH2 "Malate dehydrogenase, mitochondrial" [Sus scrofa (taxid:9823)]

 Score = 854 (305.7 bits), Expect = 2.4e-85, P = 2.4e-85
 Identities = 170/310 (54%), Positives = 219/310 (70%)

Query:    44 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQ 103
             KVA+LGA+GGIGQPL++L+K +PLVS L LYD+ +TPGV AD+SH++T A V+G+LG  Q
Sbjct:    26 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVAADLSHIETRATVKGYLGPEQ 85

Query:   104 LENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVN 163
             L + L G D+V+IPAGVPRKPGMTRDDLFN NA IV TL    A+ CP+A + +ISNPVN
Sbjct:    86 LPDCLKGCDVVVIPAGVPRKPGMTRDDLFNTNATIVATLTAACAQHCPDAMICIISNPVN 145

Query:   164 STVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEXXXXXXXXXXXXXXXXHAGVTI 223
             ST+PI AEVFKK G Y+P K+ GVT LD+VRAN FVAE                HAG TI
Sbjct:   146 STIPITAEVFKKHGVYNPNKIFGVTTLDIVRANAFVAELKGLDPARVSVPVIGGHAGKTI 205

Query:   224 LPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRG 283
             +PL+SQ  P   F Q++   LT RIQ  GTEVV+AKAGAGSATLSMAYA  +F  + +  
Sbjct:   206 IPLISQCTPKVDFPQDQLSTLTGRIQEAGTEVVKAKAGAGSATLSMAYAGARFVFSLVDA 265

Query:   284 LRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAG 343
             + G  GVVEC+FV SQ T+ P+F++ + LG++G E+   +G ++ +E   + +A  EL  
Sbjct:   266 MNGKEGVVECSFVKSQETDCPYFSTPLLLGKKGIEKNLGIGKISPFEEKMIAEAIPELKA 325

Query:   344 SIQKGISFSK 353
             SI+KG  F K
Sbjct:   326 SIKKGEEFVK 335

GO:0006475 "internal protein amino acid acetylation" evidence=ISS

GO:0005759 "mitochondrial matrix" evidence=IEA

GO:0030060 "L-malate dehydrogenase activity" evidence=IEA

GO:0006099 "tricarboxylic acid cycle" evidence=IEA

GO:0044262 "cellular carbohydrate metabolic process" evidence=IEA

GO:0006108 "malate metabolic process" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

WB|WBGene00003162 mdh-2 [Caenorhabditis elegans (taxid:6239)]

 Score = 851 (304.6 bits), Expect = 4.9e-85, P = 4.9e-85
 Identities = 178/329 (54%), Positives = 228/329 (69%)

Query:    26 NSCLRQAKCRAKGGAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTAD 85
             NS LR    R    A   KVA+LGAAGGIGQPL +L+K +PLV+ L LYDVVNTPGV AD
Sbjct:    14 NSGLRAVSVRHSSQAP--KVALLGAAGGIGQPLGLLLKQDPLVAHLALYDVVNTPGVAAD 71

Query:    86 ISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEG 145
             +SH+D+ A V    G  +L  A+   D+++IPAGVPRKPGMTRDDLFN NAGIVR L   
Sbjct:    72 LSHIDSNAKVTAHTGPKELYAAVENADVIVIPAGVPRKPGMTRDDLFNTNAGIVRDLAAV 131

Query:   146 IAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEXXXX 205
             IAK  P A + +I+NPVNSTVPIA+EV KKAG YDPK++ GVT LDVVR+  FV+E    
Sbjct:   132 IAKASPKALIAIITNPVNSTVPIASEVLKKAGVYDPKRVFGVTTLDVVRSQAFVSELKGH 191

Query:   206 XXXXXXXXXXXXHAGVTILPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSA 265
                         HAG+TI+PLLSQVKP   F++EE   LT RIQ+ GTEVV AKAGAGSA
Sbjct:   192 DASKTVVPVVGGHAGITIIPLLSQVKPSTKFSEEEISKLTPRIQDAGTEVVNAKAGAGSA 251

Query:   266 TLSMAYAAVKFADACLRGLRGDAGVVECAFVASQVTE-LPFFASKVRLGRQGAEEIFQLG 324
             TLSMA A  +FA+A +RG++G+  V +CA+VAS   + + +F++ V LG  G E+I  +G
Sbjct:   252 TLSMALAGARFANALVRGIKGEKNV-QCAYVASDAVKGVEYFSTPVELGPNGVEKILGVG 310

Query:   325 PLNEYERIGLEKAKKELAGSIQKGISFSK 353
              ++ YE+  ++ +  EL  +I KG++F K
Sbjct:   311 KVSAYEQKLIDASVPELNKNIAKGVAFVK 339

GO:0030060 "L-malate dehydrogenase activity" evidence=IEA;ISS

GO:0006108 "malate metabolic process" evidence=IEA;ISS

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0016615 "malate dehydrogenase activity" evidence=IEA

GO:0016616 "oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor" evidence=IEA

GO:0044262 "cellular carbohydrate metabolic process" evidence=IEA

GO:0009792 "embryo development ending in birth or egg hatching" evidence=IMP

GO:0040010 "positive regulation of growth rate" evidence=IMP

GO:0008340 "determination of adult lifespan" evidence=IMP

GO:0006898 "receptor-mediated endocytosis" evidence=IMP

GO:0071688 "striated muscle myosin thick filament assembly" evidence=IMP

GO:0040007 "growth" evidence=IMP

GO:0002119 "nematode larval development" evidence=IMP

GO:0005739 "mitochondrion" evidence=ISS;IDA

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Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
C0PZQ4	MDH_SALPC	1, ., 1, ., 1, ., 3, 7	0.5541	0.8757	0.9935	yes	no
Q43744	MDHM_BRANA	1, ., 1, ., 1, ., 3, 7	0.6090	0.9265	0.9618	N/A	no
Q43743	MDHG1_BRANA	1, ., 1, ., 1, ., 3, 7	0.8379	1.0	0.9888	N/A	no
B5BGR3	MDH_SALPK	1, ., 1, ., 1, ., 3, 7	0.5541	0.8757	0.9935	yes	no
Q5NVR2	MDHM_PONAB	1, ., 1, ., 1, ., 3, 7	0.5806	0.8757	0.9171	yes	no
Q1CEJ3	MDH_YERPN	1, ., 1, ., 1, ., 3, 7	0.5498	0.8672	0.9839	yes	no
Q9KUT3	MDH_VIBCH	1, ., 1, ., 1, ., 3, 7	0.5559	0.8728	0.9935	yes	no
A9R584	MDH_YERPG	1, ., 1, ., 1, ., 3, 7	0.5498	0.8672	0.9839	yes	no
Q42972	MDHG_ORYSJ	1, ., 1, ., 1, ., 3, 7	0.8483	1.0	0.9943	yes	no
Q1CBY7	MDH_YERPA	1, ., 1, ., 1, ., 3, 7	0.5498	0.8672	0.9839	yes	no
P08249	MDHM_MOUSE	1, ., 1, ., 1, ., 3, 7	0.5806	0.8757	0.9171	yes	no
P46487	MDHM_EUCGU	1, ., 1, ., 1, ., 3, 7	0.6698	0.8785	0.8962	N/A	no
B7LRL0	MDH_ESCF3	1, ., 1, ., 1, ., 3, 7	0.5477	0.8757	0.9935	yes	no
P83373	MDHM_FRAAN	1, ., 1, ., 1, ., 3, 7	0.6623	0.8785	0.9174	N/A	no
A9N855	MDH_SALPB	1, ., 1, ., 1, ., 3, 7	0.5541	0.8757	0.9935	yes	no
P17783	MDHM_CITLA	1, ., 1, ., 1, ., 3, 7	0.6763	0.8728	0.8904	N/A	no
Q9ZP05	MDHG1_ARATH	1, ., 1, ., 1, ., 3, 7	0.8531	1.0	1.0	no	no
A7FMU2	MDH_YERP3	1, ., 1, ., 1, ., 3, 7	0.5498	0.8672	0.9839	yes	no
P46488	MDHG_CUCSA	1, ., 1, ., 1, ., 3, 7	0.8788	0.9971	0.9915	N/A	no
P61892	MDH_YERPE	1, ., 1, ., 1, ., 3, 7	0.5498	0.8672	0.9839	yes	no
A7MWD3	MDH_VIBHB	1, ., 1, ., 1, ., 3, 7	0.5718	0.8728	0.9935	yes	no
A4TRK3	MDH_YERPP	1, ., 1, ., 1, ., 3, 7	0.5498	0.8672	0.9839	yes	no
Q32LG3	MDHM_BOVIN	1, ., 1, ., 1, ., 3, 7	0.5774	0.8757	0.9171	yes	no
Q7MP97	MDH_VIBVY	1, ., 1, ., 1, ., 3, 7	0.5591	0.8700	0.9935	yes	no
Q9XFW3	MDHG2_BRANA	1, ., 1, ., 1, ., 3, 7	0.8379	1.0	0.9888	N/A	no
P37228	MDHG_SOYBN	1, ., 1, ., 1, ., 3, 7	0.8333	0.9971	1.0	no	no
P0C7R5	MDH_YERPS	1, ., 1, ., 1, ., 3, 7	0.5498	0.8672	0.9839	yes	no
Q7MYW9	MDH_PHOLL	1, ., 1, ., 1, ., 3, 7	0.5530	0.8672	0.9839	yes	no
O02640	MDHM_CAEEL	1, ., 1, ., 1, ., 3, 7	0.5683	0.9180	0.9530	yes	no
P40926	MDHM_HUMAN	1, ., 1, ., 1, ., 3, 7	0.5806	0.8757	0.9171	yes	no
B4T769	MDH_SALNS	1, ., 1, ., 1, ., 3, 7	0.5541	0.8757	0.9935	yes	no
B1IQP3	MDH_ECOLC	1, ., 1, ., 1, ., 3, 7	0.5509	0.8757	0.9935	yes	no
B4TWK9	MDH_SALSV	1, ., 1, ., 1, ., 3, 7	0.5541	0.8757	0.9935	yes	no
B1JMK1	MDH_YERPY	1, ., 1, ., 1, ., 3, 7	0.5498	0.8672	0.9839	yes	no
P04636	MDHM_RAT	1, ., 1, ., 1, ., 3, 7	0.5774	0.8757	0.9171	yes	no
C6DKH1	MDH_PECCP	1, ., 1, ., 1, ., 3, 7	0.5559	0.8728	0.9903	yes	no
P19446	MDHG_CITLA	1, ., 1, ., 1, ., 3, 7	0.8838	0.9915	0.9859	N/A	no
Q5R030	MDH_IDILO	1, ., 1, ., 1, ., 3, 7	0.5641	0.8672	0.9903	yes	no
Q42686	MDHM_CHLRE	1, ., 1, ., 1, ., 3, 7	0.6442	0.8757	0.8310	N/A	no
P00346	MDHM_PIG	1, ., 1, ., 1, ., 3, 7	0.5806	0.8757	0.9171	yes	no
P25077	MDH_SALTY	1, ., 1, ., 1, ., 3, 7	0.5541	0.8757	0.9935	yes	no
O82399	MDHG2_ARATH	1, ., 1, ., 1, ., 3, 7	0.8470	0.9858	0.9858	yes	no
B2K2N5	MDH_YERPB	1, ., 1, ., 1, ., 3, 7	0.5498	0.8672	0.9839	yes	no
B7VID0	MDH_VIBSL	1, ., 1, ., 1, ., 3, 7	0.5591	0.8728	0.9935	yes	no
Q87SU7	MDH_VIBPA	1, ., 1, ., 1, ., 3, 7	0.5654	0.8728	0.9935	yes	no
Q4R568	MDHM_MACFA	1, ., 1, ., 1, ., 3, 7	0.5806	0.8757	0.9171	N/A	no
Q8Z3E0	MDH_SALTI	1, ., 1, ., 1, ., 3, 7	0.5541	0.8757	0.9935	N/A	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	1.1.1	0.998
3rd Layer	1.1.1.37	0.994

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Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	354
PLN00106	323	PLN00106, PLN00106, malate dehydrogenase	0.0
cd01337	310	cd01337, MDH_glyoxysomal_mitochondrial, Glyoxysoma	0.0
TIGR01772	312	TIGR01772, MDH_euk_gproteo, malate dehydrogenase,	1e-151
PRK05086	312	PRK05086, PRK05086, malate dehydrogenase; Provisio	1e-145
PTZ00325	321	PTZ00325, PTZ00325, malate dehydrogenase; Provisio	1e-142
COG0039	313	COG0039, Mdh, Malate/lactate dehydrogenases [Energ	4e-80
pfam02866	173	pfam02866, Ldh_1_C, lactate/malate dehydrogenase,	5e-58
pfam00056	142	pfam00056, Ldh_1_N, lactate/malate dehydrogenase,	3e-54
cd01339	300	cd01339, LDH-like_MDH, L-lactate dehydrogenase-lik	5e-47
PRK06223	307	PRK06223, PRK06223, malate dehydrogenase; Reviewed	6e-46
cd00650	263	cd00650, LDH_MDH_like, NAD-dependent, lactate dehy	3e-36
PTZ00117	319	PTZ00117, PTZ00117, malate dehydrogenase; Provisio	6e-34
PTZ00082	321	PTZ00082, PTZ00082, L-lactate dehydrogenase; Provi	7e-32
cd00300	300	cd00300, LDH_like, L-lactate dehydrogenase-like en	1e-31
TIGR01763	305	TIGR01763, MalateDH_bact, malate dehydrogenase, NA	2e-27
cd05294	309	cd05294, LDH-like_MDH_nadp, A lactate dehydrogenas	1e-23
TIGR01771	299	TIGR01771, L-LDH-NAD, L-lactate dehydrogenase	2e-22
cd05291	306	cd05291, HicDH_like, L-2-hydroxyisocapronate dehyd	1e-20
cd00704	323	cd00704, MDH, Malate dehydrogenase	6e-18
cd05292	308	cd05292, LDH_2, A subgroup of L-lactate dehydrogen	9e-18
TIGR01759	323	TIGR01759, MalateDH-SF1, malate dehydrogenase	5e-16
cd05290	307	cd05290, LDH_3, A subgroup of L-lactate dehydrogen	6e-15
cd05293	312	cd05293, LDH_1, A subgroup of L-lactate dehydrogen	9e-14
TIGR01758	324	TIGR01758, MDH_euk_cyt, malate dehydrogenase, NAD-	2e-13
PRK00066	315	PRK00066, ldh, L-lactate dehydrogenase; Reviewed	7e-13
PLN02602	350	PLN02602, PLN02602, lactate dehydrogenase	2e-12
cd01336	325	cd01336, MDH_cytoplasmic_cytosolic, Cytoplasmic an	2e-11
TIGR01756	313	TIGR01756, LDH_protist, lactate dehydrogenase	3e-10
PLN00135	309	PLN00135, PLN00135, malate dehydrogenase	6e-08
cd01338	322	cd01338, MDH_choloroplast_like, Chloroplast-like m	8e-08
PRK05442	326	PRK05442, PRK05442, malate dehydrogenase; Provisio	1e-05
PLN00112	444	PLN00112, PLN00112, malate dehydrogenase (NADP); P	0.002

>gnl|CDD|215058 PLN00106, PLN00106, malate dehydrogenase

 Score =  656 bits (1694), Expect = 0.0
 Identities = 249/314 (79%), Positives = 271/314 (86%)

Query: 34  CRAKGGAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGA 93
           CRAKGGA GFKVA+LGAAGGIGQPL++LMK+NPLVS LHLYD+ NTPGV AD+SH++T A
Sbjct: 10  CRAKGGAPGFKVAVLGAAGGIGQPLSLLMKMNPLVSELHLYDIANTPGVAADVSHINTPA 69

Query: 94  VVRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNA 153
            VRGFLG  QL +AL G DLVIIPAGVPRKPGMTRDDLFNINAGIV+TLCE +AK CPNA
Sbjct: 70  QVRGFLGDDQLGDALKGADLVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEAVAKHCPNA 129

Query: 154 TVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVP 213
            VN+ISNPVNSTVPIAAEV KKAG YDPKKL GVT LDVVRANTFVAE  GLDP DVDVP
Sbjct: 130 LVNIISNPVNSTVPIAAEVLKKAGVYDPKKLFGVTTLDVVRANTFVAEKKGLDPADVDVP 189

Query: 214 VVGGHAGVTILPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAA 273
           VVGGHAG+TILPLLSQ  P  SFT EE E LT RIQNGGTEVVEAKAGAGSATLSMAYAA
Sbjct: 190 VVGGHAGITILPLLSQATPKVSFTDEEIEALTKRIQNGGTEVVEAKAGAGSATLSMAYAA 249

Query: 274 VKFADACLRGLRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQLGPLNEYERIG 333
            +FADACLRGL G+A VVEC++V S+VTELPFFASKVRLGR G EE+  LGPL+EYE+ G
Sbjct: 250 ARFADACLRGLNGEADVVECSYVQSEVTELPFFASKVRLGRNGVEEVLGLGPLSEYEQKG 309

Query: 334 LEKAKKELAGSIQK 347
           LE  K EL  SI+K
Sbjct: 310 LEALKPELKASIEK 323

Length = 323

>gnl|CDD|133422 cd01337, MDH_glyoxysomal_mitochondrial, Glyoxysomal and mitochondrial malate dehydrogenases

 Score =  570 bits (1471), Expect = 0.0
 Identities = 212/309 (68%), Positives = 253/309 (81%)

Query: 43  FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQP 102
            KVA+LGAAGGIGQPL++L+K+NPLVS L LYD+VNTPGV AD+SH++T A V G+LG  
Sbjct: 1   VKVAVLGAAGGIGQPLSLLLKLNPLVSELALYDIVNTPGVAADLSHINTPAKVTGYLGPE 60

Query: 103 QLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPV 162
           +L+ AL G D+V+IPAGVPRKPGMTRDDLFNINAGIVR L   +AK CP A + +ISNPV
Sbjct: 61  ELKKALKGADVVVIPAGVPRKPGMTRDDLFNINAGIVRDLATAVAKACPKALILIISNPV 120

Query: 163 NSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVT 222
           NSTVPIAAEV KKAG YDPK+L GVT LDVVRANTFVAE+LGLDP  V+VPV+GGH+GVT
Sbjct: 121 NSTVPIAAEVLKKAGVYDPKRLFGVTTLDVVRANTFVAELLGLDPAKVNVPVIGGHSGVT 180

Query: 223 ILPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLR 282
           ILPLLSQ +PP +F QEE E LT+RIQ GG EVV+AKAGAGSATLSMAYA  +FA++ LR
Sbjct: 181 ILPLLSQCQPPFTFDQEEIEALTHRIQFGGDEVVKAKAGAGSATLSMAYAGARFANSLLR 240

Query: 283 GLRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELA 342
           GL+G+ GV+ECA+V S VTE PFFA+ V LG+ G E+   LG LN+YE+  LE A  EL 
Sbjct: 241 GLKGEKGVIECAYVESDVTEAPFFATPVELGKNGVEKNLGLGKLNDYEKKLLEAALPELK 300

Query: 343 GSIQKGISF 351
            +I+KG+ F
Sbjct: 301 KNIEKGVDF 309

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. Length = 310

>gnl|CDD|130833 TIGR01772, MDH_euk_gproteo, malate dehydrogenase, NAD-dependent

 Score =  428 bits (1103), Expect = e-151
 Identities = 185/312 (59%), Positives = 233/312 (74%), Gaps = 1/312 (0%)

Query: 44  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQ 103
           KVA+LGAAGGIGQPL++L+K+ P VS L LYD+    GV AD+SH+ T A V+GF G+  
Sbjct: 1   KVAVLGAAGGIGQPLSLLLKLQPYVSELSLYDIAGAAGVAADLSHIPTAASVKGFSGEEG 60

Query: 104 LENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVN 163
           LENAL G D+V+IPAGVPRKPGMTRDDLFN+NAGIV+ L   +A+ CP A + +I+NPVN
Sbjct: 61  LENALKGADVVVIPAGVPRKPGMTRDDLFNVNAGIVKDLVAAVAESCPKAMILVITNPVN 120

Query: 164 STVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTI 223
           STVPIAAEV KK G YDP KL GVT LD+VRANTFVAE+ G DP +V+VPV+GGH+G TI
Sbjct: 121 STVPIAAEVLKKKGVYDPNKLFGVTTLDIVRANTFVAELKGKDPMEVNVPVIGGHSGETI 180

Query: 224 LPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRG 283
           +PL+SQ      FT+++ E L +RIQN GTEVV+AKAGAGSATLSMA+A  +F  + +RG
Sbjct: 181 IPLISQCPGKVLFTEDQLEALIHRIQNAGTEVVKAKAGAGSATLSMAFAGARFVLSLVRG 240

Query: 284 LRGDAGVVECAFVASQ-VTELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELA 342
           L+G+ GVVECA+V S  VTE  FFA+ + LG+ G E+   +G L+ +E   L  A  EL 
Sbjct: 241 LKGEEGVVECAYVESDGVTEATFFATPLLLGKNGVEKRLGIGKLSSFEEKMLNGALPELK 300

Query: 343 GSIQKGISFSKK 354
            +I+KG  F   
Sbjct: 301 KNIKKGEEFVAS 312

This model represents the NAD-dependent malate dehydrogenase found in eukaryotes and certain gamma proteobacteria. The enzyme is involved in the citric acid cycle as well as the glyoxalate cycle. Several isoforms exidt in eukaryotes. In S. cereviseae, for example, there are cytoplasmic, mitochondrial and peroxisomal forms. Although malate dehydrogenases have in some cases been mistaken for lactate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of lactate dehydrogenases [Energy metabolism, TCA cycle]. Length = 312

>gnl|CDD|235340 PRK05086, PRK05086, malate dehydrogenase; Provisional

 Score =  412 bits (1061), Expect = e-145
 Identities = 176/313 (56%), Positives = 214/313 (68%), Gaps = 4/313 (1%)

Query: 44  KVAILGAAGGIGQPLAMLMKIN-PLVSVLHLYDVVN-TPGVTADISHMDTGAVVRGFLGQ 101
           KVA+LGAAGGIGQ LA+L+K   P  S L LYD+   TPGV  D+SH+ T   ++GF G+
Sbjct: 2   KVAVLGAAGGIGQALALLLKTQLPAGSELSLYDIAPVTPGVAVDLSHIPTAVKIKGFSGE 61

Query: 102 PQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNP 161
                AL G D+V+I AGV RKPGM R DLFN+NAGIV+ L E +AK CP A + +I+NP
Sbjct: 62  -DPTPALEGADVVLISAGVARKPGMDRSDLFNVNAGIVKNLVEKVAKTCPKACIGIITNP 120

Query: 162 VNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGV 221
           VN+TV IAAEV KKAG YD  KL GVT LDV+R+ TFVAE+ G  P +V+VPV+GGH+GV
Sbjct: 121 VNTTVAIAAEVLKKAGVYDKNKLFGVTTLDVIRSETFVAELKGKQPGEVEVPVIGGHSGV 180

Query: 222 TILPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACL 281
           TILPLLSQV P  SFT++E   LT RIQN GTEVVEAKAG GSATLSM  AA +F  + +
Sbjct: 181 TILPLLSQV-PGVSFTEQEVADLTKRIQNAGTEVVEAKAGGGSATLSMGQAAARFGLSLV 239

Query: 282 RGLRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKEL 341
           R L+G+ GVVECA+V        FFA  V LG+ G EE   +G L+ +E+  LE     L
Sbjct: 240 RALQGEQGVVECAYVEGDGKYARFFAQPVLLGKNGVEERLPIGTLSAFEQNALEGMLDTL 299

Query: 342 AGSIQKGISFSKK 354
              I  G  F  K
Sbjct: 300 KKDIALGEEFVNK 312

Length = 312

>gnl|CDD|240360 PTZ00325, PTZ00325, malate dehydrogenase; Provisional

 Score =  405 bits (1042), Expect = e-142
 Identities = 192/313 (61%), Positives = 234/313 (74%), Gaps = 3/313 (0%)

Query: 43  FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQP 102
           FKVA+LGAAGGIGQPL++L+K NP VS L LYD+V  PGV AD+SH+DT A V G+    
Sbjct: 9   FKVAVLGAAGGIGQPLSLLLKQNPHVSELSLYDIVGAPGVAADLSHIDTPAKVTGYADGE 68

Query: 103 QLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPV 162
             E AL G DLV+I AGVPRKPGMTRDDLFN NA IVR L   +A   P A V ++SNPV
Sbjct: 69  LWEKALRGADLVLICAGVPRKPGMTRDDLFNTNAPIVRDLVAAVASSAPKAIVGIVSNPV 128

Query: 163 NSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVT 222
           NSTVPIAAE  KKAG YDP+KL GVT LDVVRA  FVAE LG++P DV+VPVVGGH+GVT
Sbjct: 129 NSTVPIAAETLKKAGVYDPRKLFGVTTLDVVRARKFVAEALGMNPYDVNVPVVGGHSGVT 188

Query: 223 ILPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLR 282
           I+PLLSQ     S  +E+ E +T+R+Q GG EVV+AK GAGSATLSMAYAA +++ + L+
Sbjct: 189 IVPLLSQT--GLSLPEEQVEQITHRVQVGGDEVVKAKEGAGSATLSMAYAAAEWSTSVLK 246

Query: 283 GLRGDAGVVECAFVASQVT-ELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKEL 341
            LRGD G+VECAFV S +  E PFF+S V LG++G E +  +GPLN YE   LE A  +L
Sbjct: 247 ALRGDKGIVECAFVESDMRPECPFFSSPVELGKEGVERVLPIGPLNAYEEELLEAAVPDL 306

Query: 342 AGSIQKGISFSKK 354
             +I+KG+ F++K
Sbjct: 307 KKNIEKGLEFARK 319

Length = 321

>gnl|CDD|223117 COG0039, Mdh, Malate/lactate dehydrogenases [Energy production and conversion]

 Score =  247 bits (632), Expect = 4e-80
 Identities = 113/319 (35%), Positives = 166/319 (52%), Gaps = 21/319 (6%)

Query: 44  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLGQ 101
           KVA++GA G +G  LA L+ +  L S L L D+      GV  D+SH          +  
Sbjct: 2   KVAVIGA-GNVGSSLAFLLLLQGLGSELVLIDINEEKAEGVALDLSHAAAPLGSDVKITG 60

Query: 102 PQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNP 161
                 L G D+V+I AGVPRKPGMTR DL   NA IV+ + + IAK  P+A V +++NP
Sbjct: 61  DGDYEDLKGADIVVITAGVPRKPGMTRLDLLEKNAKIVKDIAKAIAKYAPDAIVLVVTNP 120

Query: 162 VNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGV 221
           V+    IA +    +G    + +   T+LD  R  TF+AE LG+ P+DV   V+G H G 
Sbjct: 121 VDILTYIAMKF---SGFPKNRVIGSGTVLDSARFRTFLAEKLGVSPKDVHAYVIGEH-GD 176

Query: 222 TILPLLSQV----KPPCSF----TQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAA 273
           T++PL SQ     KP        T+E+ E L  R++N G E++EAK GAG      A A 
Sbjct: 177 TMVPLWSQATVGGKPLEELLKEDTEEDLEELIERVRNAGAEIIEAK-GAG-TYYGPAAAL 234

Query: 274 VKFADACLRGLRGDAGVVECAFVASQ-VTELPFFASKVRLGRQGAEEIFQLGPLNEYERI 332
            +  +A LR  +    +    ++  +   E  +F     LG+ G EEI +L  L++ E+ 
Sbjct: 235 ARMVEAILRDEK--RVLPVSVYLDGEYGVEDVYFGVPAVLGKNGVEEILEL-LLSDDEQE 291

Query: 333 GLEKAKKELAGSIQKGISF 351
            L+K+ +EL  +I+     
Sbjct: 292 KLDKSAEELKKNIELVKEL 310

Length = 313

>gnl|CDD|202437 pfam02866, Ldh_1_C, lactate/malate dehydrogenase, alpha/beta C-terminal domain

 Score =  185 bits (471), Expect = 5e-58
 Identities = 79/176 (44%), Positives = 103/176 (58%), Gaps = 16/176 (9%)

Query: 188 TMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAG----------VTILPLLSQVKPPCSFT 237
           T LD  RA TF+AE  G+DPR V+V V+G H+G          VTI+PL+SQVK     T
Sbjct: 1   TTLDTARARTFLAEKFGVDPRSVNVYVIGEHSGTQFPDWSHAKVTIIPLISQVKENLKDT 60

Query: 238 QEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRGLRGD--AGVVECAF 295
             E E L  R+QN G EV+EAK  AGS T SMAYAA + A A LRG  G    GV    +
Sbjct: 61  DWELEELIERVQNAGYEVIEAK--AGSTTYSMAYAAARIAKAILRGTGGVLSVGVYLDGY 118

Query: 296 VASQVTELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSIQKGISF 351
                 +  +F+  V LG+ G E++ ++ PLN++ER  LEK+  EL   I+KG +F
Sbjct: 119 Y--GSPDDIYFSVPVVLGKDGVEKVVEILPLNDFEREKLEKSAAELKKEIEKGFAF 172

L-lactate dehydrogenases are metabolic enzymes which catalyze the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyze the interconversion of malate to oxaloacetate. The enzyme participates in the citric acid cycle. L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. Length = 173

>gnl|CDD|200963 pfam00056, Ldh_1_N, lactate/malate dehydrogenase, NAD binding domain

 Score =  174 bits (444), Expect = 3e-54
 Identities = 60/145 (41%), Positives = 80/145 (55%), Gaps = 6/145 (4%)

Query: 44  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVV--NTPGVTADISHMDTGAVVRGFLGQ 101
           KVA++GA GG+G  LA  + +  L   L L D+      GV  D+SH  T   V G +G 
Sbjct: 2   KVAVVGAGGGVGSSLAFALALQGLADELVLVDINKDKAEGVAMDLSHGSTFLSVPGIVGG 61

Query: 102 PQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNP 161
                AL   D+V+I AGVPRKPGMTR DL N NAGI + +   IAK  P+A V ++SNP
Sbjct: 62  DD-YEALKDADVVVITAGVPRKPGMTRLDLLNRNAGIFKDIVPAIAKSAPDAIVLVVSNP 120

Query: 162 VNSTVPIAAEVFKKAGTYDPKKLLG 186
           V+    IA +V   +G    + +  
Sbjct: 121 VDILTYIAWKV---SGLPPERVIGS 142

L-lactate dehydrogenases are metabolic enzymes which catalyze the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyze the interconversion of malate to oxaloacetate. The enzyme participates in the citric acid cycle. L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. N-terminus (this family) is a Rossmann NAD-binding fold. C-terminus is an unusual alpha+beta fold. Length = 142

>gnl|CDD|133424 cd01339, LDH-like_MDH, L-lactate dehydrogenase-like malate dehydrogenase proteins

 Score =  161 bits (409), Expect = 5e-47
 Identities = 102/323 (31%), Positives = 158/323 (48%), Gaps = 46/323 (14%)

Query: 45  VAILGAAGGIGQPLAMLMKINPLVSVLHLYDVV-NTP-GVTADISHM----DTGAVVRGF 98
           ++I+GA G +G  LA L+ +  L  V+ L D+V   P G   DIS       +   V G 
Sbjct: 1   ISIIGA-GNVGATLAQLLALKELGDVV-LLDIVEGLPQGKALDISQAAPILGSDTKVTGT 58

Query: 99  LGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLI 158
                +  +    D+V+I AG+PRKPGM+RDDL   NA IV+ + E I K  PNA V ++
Sbjct: 59  NDYEDIAGS----DVVVITAGIPRKPGMSRDDLLGTNAKIVKEVAENIKKYAPNAIVIVV 114

Query: 159 SNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRANTFVAEVLGLDPRDVDVPVVGG 217
           +NP++        V  KA  +   +++G+  +LD  R   F+AE LG+  +DV   V+GG
Sbjct: 115 TNPLDVMT----YVAYKASGFPRNRVIGMAGVLDSARFRYFIAEELGVSVKDVQAMVLGG 170

Query: 218 HAGVTILPLLSQV----KPPCSF-TQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYA 272
           H G T++PL         P     T+EE + +  R +NGG E+V      GSA  + A A
Sbjct: 171 H-GDTMVPLPRYSTVGGIPLTELITKEEIDEIVERTRNGGAEIVNLL-KTGSAYYAPAAA 228

Query: 273 AVKFADACLRG----------LRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQ 322
             +  +A L+           L G+ G+ +          +P     V LG+ G E+I +
Sbjct: 229 IAEMVEAILKDKKRVLPCSAYLEGEYGIKDIFV------GVP-----VVLGKNGVEKIIE 277

Query: 323 LGPLNEYERIGLEKAKKELAGSI 345
           L  L + E+   +K+ + +   I
Sbjct: 278 L-DLTDEEKEAFDKSVESVKELI 299

Members of this subfamily have an LDH-like structure and an MDH enzymatic activity. Some members, like MJ0490 from Methanococcus jannaschii, exhibit both MDH and LDH activities. Tetrameric MDHs, including those from phototrophic bacteria, are more similar to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. Length = 300

>gnl|CDD|180477 PRK06223, PRK06223, malate dehydrogenase; Reviewed

 Score =  158 bits (402), Expect = 6e-46
 Identities = 102/325 (31%), Positives = 169/325 (52%), Gaps = 44/325 (13%)

Query: 44  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVV-NTP-GVTADISHMDTGAVVRGFLGQ 101
           K++I+GA G +G  LA L+ +  L  V+ L+D+V   P G   DI+     A V GF  +
Sbjct: 4   KISIIGA-GNVGATLAHLLALKELGDVV-LFDIVEGVPQGKALDIAEA---APVEGFDTK 58

Query: 102 PQLEN---ALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLI 158
               N    + G D+V+I AGVPRKPGM+RDDL  INA I++ + EGI K  P+A V ++
Sbjct: 59  ITGTNDYEDIAGSDVVVITAGVPRKPGMSRDDLLGINAKIMKDVAEGIKKYAPDAIVIVV 118

Query: 159 SNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRANTFVAEVLGLDPRDVDVPVVGG 217
           +NPV++   +A     K   +   +++G+  +LD  R  TF+AE L +  +DV   V+GG
Sbjct: 119 TNPVDAMTYVA----LKESGFPKNRVIGMAGVLDSARFRTFIAEELNVSVKDVTAFVLGG 174

Query: 218 HAGVTILPLLSQ-----VKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYA 272
           H G +++PL+       +      ++E+ + +  R + GG E+V      GSA  + A +
Sbjct: 175 H-GDSMVPLVRYSTVGGIPLEDLLSKEKLDEIVERTRKGGAEIVGLL-KTGSAYYAPAAS 232

Query: 273 AVKFADACLRG----------LRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQ 322
             +  +A L+           L G+ GV +          +P     V+LG+ G E+I +
Sbjct: 233 IAEMVEAILKDKKRVLPCSAYLEGEYGVKDVYV------GVP-----VKLGKNGVEKIIE 281

Query: 323 LGPLNEYERIGLEKAKKELAGSIQK 347
           L  L++ E+   +K+ + +   I+ 
Sbjct: 282 L-ELDDEEKAAFDKSVEAVKKLIEA 305

Length = 307

>gnl|CDD|133419 cd00650, LDH_MDH_like, NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family

 Score =  131 bits (332), Expect = 3e-36
 Identities = 63/192 (32%), Positives = 93/192 (48%), Gaps = 9/192 (4%)

Query: 45  VAILGAAGGIGQPLA--MLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLG 100
           +A++GA G +G  LA  +      L   L LYD+      GV  D+              
Sbjct: 1   IAVIGAGGNVGPALAFGLADGSVLLAIELVLYDIDEEKLKGVAMDLQDAVEPLADIKVSI 60

Query: 101 QPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISN 160
                 A    D+VII AGV RKPGM R DL   N  IV+ + + I K  P+A + ++SN
Sbjct: 61  TDDPYEAFKDADVVIITAGVGRKPGMGRLDLLKRNVPIVKEIGDNIEKYSPDAWIIVVSN 120

Query: 161 PVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAG 220
           PV+    I   +  +      +K++G+  LD +R    +AE LG+DP DV V ++G H G
Sbjct: 121 PVD----IITYLVWRYSGLPKEKVIGLGTLDPIRFRRILAEKLGVDPDDVKVYILGEHGG 176

Query: 221 VTILPLLSQVKP 232
            + +P  S V+ 
Sbjct: 177 -SQVPDWSTVRI 187

Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. Length = 263

>gnl|CDD|173409 PTZ00117, PTZ00117, malate dehydrogenase; Provisional

 Score =  127 bits (320), Expect = 6e-34
 Identities = 95/305 (31%), Positives = 149/305 (48%), Gaps = 31/305 (10%)

Query: 44  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVV-NTP-GVTADISH-MDTGAVVRGFLG 100
           K++++GA G IG  +A+L+    L  V+ LYDV+   P G   D+ H           LG
Sbjct: 7   KISMIGA-GQIGSTVALLILQKNLGDVV-LYDVIKGVPQGKALDLKHFSTLVGSNINILG 64

Query: 101 QPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISN 160
               E  +   D+V+I AGV RK  MTR+DL  IN  I++++ E + K CPNA V  ++N
Sbjct: 65  TNNYE-DIKDSDVVVITAGVQRKEEMTREDLLTINGKIMKSVAESVKKYCPNAFVICVTN 123

Query: 161 PVNSTVPIAAEVFKKAGTYDPKKLLGVT-MLDVVRANTFVAEVLGLDPRDVDVPVVGGHA 219
           P++       +VF++       K+ G+  +LD  R    +AE LG+ P DV   V+GGH 
Sbjct: 124 PLD----CMVKVFQEKSGIPSNKICGMAGVLDSSRFRCNLAEKLGVSPGDVSAVVIGGH- 178

Query: 220 GVTILPLLSQVK----PPCSF------TQEETEYLTNRIQNGGTEVVEAKAGAGSATLSM 269
           G  ++PL         P   F      T++E   +  + +N G E+V+     GSA  + 
Sbjct: 179 GDLMVPLPRYCTVNGIPLSDFVKKGAITEKEINEIIKKTRNMGGEIVKL-LKKGSAFFAP 237

Query: 270 AYAAVKFADACLRGLRGDAGVVECAFVAS---QVTELPFFASKVRLGRQGAEEIFQLGPL 326
           A A V   +A L+  +    V+ C+   +       L F    V +G +G E++ +L  L
Sbjct: 238 AAAIVAMIEAYLKDEK---RVLVCSVYLNGQYNCKNL-FVGVPVVIGGKGIEKVIEL-EL 292

Query: 327 NEYER 331
           N  E+
Sbjct: 293 NAEEK 297

Length = 319

>gnl|CDD|173376 PTZ00082, PTZ00082, L-lactate dehydrogenase; Provisional

 Score =  121 bits (306), Expect = 7e-32
 Identities = 105/319 (32%), Positives = 172/319 (53%), Gaps = 36/319 (11%)

Query: 44  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVV-NTP-GVTADISHMDTGAVVR-GFLG 100
           K++++G+ G IG  +A L+ +  L  V+ L+D+V N P G   DISH +  A      +G
Sbjct: 8   KISLIGS-GNIGGVMAYLIVLKNLGDVV-LFDIVKNIPQGKALDISHSNVIAGSNSKVIG 65

Query: 101 QPQLENALTGMDLVIIPAGVPRKPGMT-----RDDLFNINAGIVRTLCEGIAKCCPNATV 155
               E+ + G D+VI+ AG+ ++PG +     RDDL  +NA I+  + EGI K CPNA V
Sbjct: 66  TNNYED-IAGSDVVIVTAGLTKRPGKSDKEWNRDDLLPLNAKIMDEVAEGIKKYCPNAFV 124

Query: 156 NLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVT-MLDVVRANTFVAEVLGLDPRDVDVPV 214
            +I+NP++  V    ++ ++       K+ G+  +LD  R  T++AE LG++PRDV   V
Sbjct: 125 IVITNPLDVMV----KLLQEHSGLPKNKVCGMAGVLDSSRLRTYIAEKLGVNPRDVHASV 180

Query: 215 VGGHAGVTILPLLSQVK----PPCSF------TQEETEYLTNRIQNGGTEVVEAKAGAGS 264
           +G H G  ++PL   V     P   F      TQEE + +  R +N G E+V+   G GS
Sbjct: 181 IGAH-GDKMVPLPRYVTVGGIPLSEFIKKGLITQEEIDEIVERTRNTGKEIVDL-LGTGS 238

Query: 265 ATLSMAYAAVKFADACLRGLRGDAGVVEC-AFVASQ--VTELPFFASKVRLGRQGAEEIF 321
           A  + A AA++ A+A L+  +    V+ C A++  Q    ++ +  +   +G  G E+I 
Sbjct: 239 AYFAPAAAAIEMAEAYLKDKK---RVLPCSAYLEGQYGHKDI-YMGTPAVIGANGVEKII 294

Query: 322 QLGPLNEYERIGLEKAKKE 340
           +L  L   E+   +++ KE
Sbjct: 295 EL-DLTPEEQKKFDESIKE 312

Length = 321

>gnl|CDD|133418 cd00300, LDH_like, L-lactate dehydrogenase-like enzymes

 Score =  120 bits (303), Expect = 1e-31
 Identities = 89/318 (27%), Positives = 140/318 (44%), Gaps = 44/318 (13%)

Query: 45  VAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHM----DTGAVVRGF 98
           + I+GA G +G  +A  +    L S L L DV      G   D+SH      TG +VRG 
Sbjct: 1   ITIIGA-GNVGAAVAFALIAKGLASELVLVDVNEEKAKGDALDLSHASAFLATGTIVRG- 58

Query: 99  LGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLI 158
                        D+V+I AG PRKPG TR DL N NA I+R++   + K  P+A + ++
Sbjct: 59  ----GDYADAADADIVVITAGAPRKPGETRLDLINRNAPILRSVITNLKKYGPDAIILVV 114

Query: 159 SNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRANTFVAEVLGLDPRDVDVPVVGG 217
           SNPV+    I   V +K       +++G  T+LD  R  + +AE L +DP+ V   V+G 
Sbjct: 115 SNPVD----ILTYVAQKLSGLPKNRVIGSGTLLDSARFRSLLAEKLDVDPQSVHAYVLGE 170

Query: 218 HAGVTILPLLSQVK-------PPCSFTQEETEYLTNRIQNGGTEVVEAKAGA----GSAT 266
           H G + +   S              FT+ + E +   ++  G E++  K        +A 
Sbjct: 171 H-GDSQVVAWSTATVGGLPLEELAPFTKLDLEAIEEEVRTSGYEIIRLKGATNYGIATAI 229

Query: 267 LSMAYAAVKFADACL---RGLRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQL 323
             +  + +      L       G  G+ + A        +P       +GR+G   I ++
Sbjct: 230 ADIVKSILLDERRVLPVSAVQEGQYGIEDVAL------SVP-----AVVGREGVVRILEI 278

Query: 324 GPLNEYERIGLEKAKKEL 341
            PL E E   L+K+ + L
Sbjct: 279 -PLTEDEEAKLQKSAEAL 295

Members of this subfamily are tetrameric NAD-dependent 2-hydroxycarboxylate dehydrogenases including LDHs, L-2-hydroxyisocaproate dehydrogenases (L-HicDH), and LDH-like malate dehydrogenases (MDH). Dehydrogenases catalyze the conversion of carbonyl compounds to alcohols or amino acids. LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. L-HicDH catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. Length = 300

>gnl|CDD|233562 TIGR01763, MalateDH_bact, malate dehydrogenase, NAD-dependent

 Score =  109 bits (274), Expect = 2e-27
 Identities = 89/313 (28%), Positives = 152/313 (48%), Gaps = 36/313 (11%)

Query: 44  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGF----L 99
           K++++GA G +G   A  +    L  ++ L DVV        +   +   V  GF     
Sbjct: 3   KISVIGA-GFVGATTAFRLAEKELADLV-LLDVVEGIPQGKALDMYEASPV-GGFDTKVT 59

Query: 100 GQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS 159
           G     +     D+V+I AG+PRKPGM+R+DL ++NAGIVR +   I +  PN  + ++S
Sbjct: 60  GTNNYADT-ANSDIVVITAGLPRKPGMSREDLLSMNAGIVREVTGRIMEHSPNPIIVVVS 118

Query: 160 NPVNSTVPIAAEVFKKAGTYDPKKLLGVT-MLDVVRANTFVAEVLGLDPRDVDVPVVGGH 218
           NP+++   +A +       +  ++++G   +LD  R  TF+A  LG+  +DV   V+GGH
Sbjct: 119 NPLDAMTYVAWQK----SGFPKERVIGQAGVLDSARFRTFIAMELGVSVQDVTACVLGGH 174

Query: 219 AGVTILPL----------LSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSATLS 268
            G  ++PL          ++ +        E    +  R + GG E+V      GSA  +
Sbjct: 175 -GDAMVPLVRYSTVAGIPVADLISA-----ERIAEIVERTRKGGGEIVNL-LKQGSAYYA 227

Query: 269 MAYAAVKFADACLRGLRGDAGVVEC-AFVASQV-TELPFFASKVRLGRQGAEEIFQLGPL 326
            A + V+  +A L+  +    V+ C A++  Q   +  +    V LG+ G E I++L  L
Sbjct: 228 PAASVVEMVEAILKDRK---RVLPCAAYLDGQYGIDGIYVGVPVILGKNGVEHIYEL-KL 283

Query: 327 NEYERIGLEKAKK 339
           ++ E   L K+ K
Sbjct: 284 DQSELALLNKSAK 296

This enzyme converts malate into oxaloacetate in the citric acid cycle. The critical residues which discriminate malate dehydrogenase from lactate dehydrogenase have been characterized , and have been used to set the cutoffs for this model. Sequences showing [aflimv][ap]R[rk]pgM[st] and [ltv][ilm]gGhgd were kept above trusted, while those in which the capitalized residues in the patterns were found to be Q, E and E were kept below the noise cutoff. Some sequences in the grey zone have been annotated as malate dehydrogenases, but none have been characterized. Phylogenetically, a clade of sequences from eukaryotes such as Toxoplasma and Plasmodium which include a characterized lactate dehydrogenase and show abiguous critical residue patterns appears to be more closely related to these bacterial sequences than other eukaryotic sequences. These are relatively long branch and have been excluded from the model. All other sequences falling below trusted appear to be phylogenetically outside of the clade including the trusted hits. The annotation of Botryococcus braunii as lactate dehydrogenase appears top be in error. This was initially annotated as MDH by Swiss-Prot and then changed. The rationale for either of these annotations is not traceable [Energy metabolism, TCA cycle]. Length = 305

>gnl|CDD|133430 cd05294, LDH-like_MDH_nadp, A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity

 Score = 98.6 bits (246), Expect = 1e-23
 Identities = 66/243 (27%), Positives = 115/243 (47%), Gaps = 43/243 (17%)

Query: 44  KVAILGAAGGIGQPLAMLMKINPLVSVLHL-----------------YDVVNTPGVTADI 86
           KV+I+GA+G +G   A+L+    +V  ++L                 YD +   G+ A+I
Sbjct: 2   KVSIIGASGRVGSATALLLAKEDVVKEINLISRPKSLEKLKGLRLDIYDALAAAGIDAEI 61

Query: 87  SHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGI 146
                 + V              G D+VII AGVPRK GM+R DL   NA IV+   + I
Sbjct: 62  KISSDLSDV-------------AGSDIVIITAGVPRKEGMSRLDLAKKNAKIVKKYAKQI 108

Query: 147 AKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRANTFVAEVLGL 205
           A+  P+  + +++NPV+     A    K++G +D  ++ G+ T LD +R    +A+   +
Sbjct: 109 AEFAPDTKILVVTNPVDVMTYKA---LKESG-FDKNRVFGLGTHLDSLRFKVAIAKHFNV 164

Query: 206 DPRDVDVPVVGGHAGVTILPLLSQ-------VKPPCSFTQEETEYLTNRIQNGGTEVVEA 258
              +V   ++G H G +++PL+S        +K    +   + E +   ++N G  ++  
Sbjct: 165 HISEVHTRIIGEH-GDSMVPLISSTSIGGIPIKRFPEYKDFDVEKIVETVKNAGQNIISL 223

Query: 259 KAG 261
           K G
Sbjct: 224 KGG 226

The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)- binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenase, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. Length = 309

>gnl|CDD|233566 TIGR01771, L-LDH-NAD, L-lactate dehydrogenase

 Score = 95.0 bits (237), Expect = 2e-22
 Identities = 64/248 (25%), Positives = 111/248 (44%), Gaps = 26/248 (10%)

Query: 108 LTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVP 167
               DLV+I AG P+KPG TR +L   N  I++++   + K   +    + +NPV+    
Sbjct: 62  CKDADLVVITAGAPQKPGETRLELVGRNVRIMKSIVPEVVKSGFDGIFLVATNPVD---- 117

Query: 168 IAAEVFKKAGTYDPKKLLGV-TMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPL 226
           I   V  K   +   +++G  T+LD  R    +AE LG+DP+ V   ++G H G + +P+
Sbjct: 118 ILTYVAWKLSGFPKNRVIGSGTVLDTARLRYLLAEKLGVDPQSVHAYIIGEH-GDSEVPV 176

Query: 227 LSQVK----PPCSF---TQEETEYLTNRI----QNGGTEVVEAKAGAGSATLSMAYAAVK 275
            S       P   +      ET+     I    ++   E++  K   G+    +  A  +
Sbjct: 177 WSSATIGGVPLLDYLKAKGTETDLDLEEIEKEVRDAAYEIINRK---GATYYGIGMAVAR 233

Query: 276 FADACLRGLRGDAGVVEC-AFVASQVTELPFFASKVR-LGRQGAEEIFQLGPLNEYERIG 333
             +A L        V+   A++  +      +      LGR G EEI +L PL++ E+  
Sbjct: 234 IVEAILHDEN---RVLPVSAYLDGEYGIKDVYIGVPAVLGRNGVEEIIEL-PLSDEEKEA 289

Query: 334 LEKAKKEL 341
            +K+ + L
Sbjct: 290 FQKSAETL 297

This model represents the NAD-dependent L-lactate dehydrogenases from bacteria and eukaryotes. This enzyme function as as the final step in anaerobic glycolysis. Although lactate dehydrogenases have in some cases been mistaken for malate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of malate dehydrogenases [Energy metabolism, Anaerobic, Energy metabolism, Glycolysis/gluconeogenesis]. Length = 299

>gnl|CDD|133427 cd05291, HicDH_like, L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases

 Score = 90.6 bits (226), Expect = 1e-20
 Identities = 67/261 (25%), Positives = 110/261 (42%), Gaps = 47/261 (18%)

Query: 111 MDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAA 170
            D+V+I AG P+KPG TR DL   NA I++++   I     +    + SNPV+    +  
Sbjct: 69  ADIVVITAGAPQKPGETRLDLLEKNAKIMKSIVPKIKASGFDGIFLVASNPVD----VIT 124

Query: 171 EVFKKAGTYDPKKLLGV-TMLDVVRANTFVAEVLGLDPRDVDVPVVGGH----------- 218
            V +K       +++G  T LD  R    +AE L +DPR V   V+G H           
Sbjct: 125 YVVQKLSGLPKNRVIGTGTSLDTARLRRALAEKLNVDPRSVHAYVLGEHGDSQFVAWSTV 184

Query: 219 --AGVTILPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKF 276
              G  +L LL + K     ++ + + +   ++  G E++  K   G+    +A A  + 
Sbjct: 185 TVGGKPLLDLLKEGK----LSELDLDEIEEDVRKAGYEIINGK---GATYYGIATALARI 237

Query: 277 ADACLRG----------LRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQLGPL 326
             A L            L G+ G  +            +      +GR G EE+ +L  L
Sbjct: 238 VKAILNDENAILPVSAYLDGEYGEKDV-----------YIGVPAIIGRNGVEEVIEL-DL 285

Query: 327 NEYERIGLEKAKKELAGSIQK 347
            E E+   EK+   +  +I+K
Sbjct: 286 TEEEQEKFEKSADIIKENIKK 306

L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. Length = 306

>gnl|CDD|133420 cd00704, MDH, Malate dehydrogenase

 Score = 83.1 bits (206), Expect = 6e-18
 Identities = 72/262 (27%), Positives = 104/262 (39%), Gaps = 48/262 (18%)

Query: 44  KVAILGAAGGIGQPLA-------MLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAV-- 94
            V I GAAG IG  L        +     P++  LHL D+         +  ++   +  
Sbjct: 2   HVLITGAAGQIGYNLLFLIASGELFGDDQPVI--LHLLDI------PPAMKALEGVVMEL 53

Query: 95  -------VRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIA 147
                  ++G +     E A   +D+ I+    PRKPGM R DL   NA I +   E + 
Sbjct: 54  QDCAFPLLKGVVITTDPEEAFKDVDVAILVGAFPRKPGMERADLLRKNAKIFKEQGEALN 113

Query: 148 KCC-PNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEVLGLD 206
           K   P   V ++ NP N+   IA    K A    PK    +T LD  RA   VA  LG+ 
Sbjct: 114 KVAKPTVKVLVVGNPANTNALIAL---KNAPNLPPKNFTALTRLDHNRAKAQVARKLGVR 170

Query: 207 PRDV-DVPVVGGHAGVTILPLLSQ-------------VKPPCSFTQEETEYLTNRIQNGG 252
             DV +V + G H+  T +P LS                    +  +E       +Q  G
Sbjct: 171 VSDVKNVIIWGNHSN-TQVPDLSNAVVYGPGGTEWVLDLLDEEWLNDE---FVKTVQKRG 226

Query: 253 TEVVEAKAGAGSATLSMAYAAV 274
             +++ + GA SA  S A A  
Sbjct: 227 AAIIKKR-GASSA-ASAAKAIA 246

Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. Length = 323

>gnl|CDD|133428 cd05292, LDH_2, A subgroup of L-lactate dehydrogenases

 Score = 82.2 bits (204), Expect = 9e-18
 Identities = 92/330 (27%), Positives = 142/330 (43%), Gaps = 52/330 (15%)

Query: 44  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTA---DISH-MDTGAVVRGFL 99
           KVAI+GA G +G   A  + +  L S + L D+ N         D++H       VR + 
Sbjct: 2   KVAIVGA-GFVGSTTAYALLLRGLASEIVLVDI-NKAKAEGEAMDLAHGTPFVKPVRIYA 59

Query: 100 GQPQ-LENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLI 158
           G     + A    D+V+I AG  +KPG TR DL   N  I + +   I K  P+A + ++
Sbjct: 60  GDYADCKGA----DVVVITAGANQKPGETRLDLLKRNVAIFKEIIPQILKYAPDAILLVV 115

Query: 159 SNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRANTFVAEVLGLDPRDVDVPVVGG 217
           +NPV+    +   V  K     P +++G  T+LD  R    + E LG+DPR V   ++G 
Sbjct: 116 TNPVD----VLTYVAYKLSGLPPNRVIGSGTVLDTARFRYLLGEHLGVDPRSVHAYIIGE 171

Query: 218 H-------------AGVTILPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGA-- 262
           H              GV +         P  F +E  E +   ++N   E++E K GA  
Sbjct: 172 HGDSEVAVWSSANIGGVPLDEFCKLCGRP--FDEEVREEIFEEVRNAAYEIIERK-GATY 228

Query: 263 ---GSATLSMAYAAVKFADACL---RGLRGDAGVVECAFVASQVTELPFFASKVRLGRQG 316
              G A   +  A ++  ++ L     L G  G+ + A        LP     V  GR G
Sbjct: 229 YAIGLALARIVEAILRDENSVLTVSSLLDGQYGIKDVAL------SLP---CIV--GRSG 277

Query: 317 AEEIFQLGPLNEYERIGLEKAKKELAGSIQ 346
            E +    PL+E E   L  + + L  +I+
Sbjct: 278 VERVLPP-PLSEEEEEALRASAEVLKEAIE 306

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed predominantly of bacterial LDHs and a few fungal LDHs. Bacterial LDHs may be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. Length = 308

>gnl|CDD|130820 TIGR01759, MalateDH-SF1, malate dehydrogenase

 Score = 77.4 bits (191), Expect = 5e-16
 Identities = 90/324 (27%), Positives = 137/324 (42%), Gaps = 38/324 (11%)

Query: 44  KVAILGAAGGIGQPLA-------MLMKINPLVSVLHLYDVVNT----PGVTADISHMDTG 92
           +VA+ GAAG IG  L        +  K  P+V  LHL D+        GV  ++   D  
Sbjct: 5   RVAVTGAAGQIGYSLLFRIASGELFGKDQPVV--LHLLDIPPAMKALEGVAMEL--EDCA 60

Query: 93  -AVVRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC- 150
             ++ G +     E A   +D  ++    PRKPGM R DL + N  I +   + + K   
Sbjct: 61  FPLLAGVVATTDPEEAFKDVDAALLVGAFPRKPGMERADLLSKNGKIFKEQGKALNKVAK 120

Query: 151 PNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDV 210
            +  V ++ NP N+   IA+   K A    PK    +T LD  RA   +A   G+   DV
Sbjct: 121 KDVKVLVVGNPANTNALIAS---KNAPDIPPKNFSAMTRLDHNRAKYQLAAKAGVPVSDV 177

Query: 211 -DVPVVGGHAGVTILPLLSQVK---PPCSFTQEETEYLTN----RIQNGGTEVVEAKAGA 262
            +V + G H+  T +P  +       P     ++ ++L       +Q  G  V+EA+ GA
Sbjct: 178 KNVIIWGNHSN-TQVPDFTHATVDGRPVKEVIKDDKWLEGEFIPTVQQRGAAVIEAR-GA 235

Query: 263 GSATLSMAYAAVKFADACLRGLRGDAGVVECAFVASQ-----VTELPFFASKVRLGRQGA 317
            SA  S A AA+      + G     G      V S      + E   F+  V     G 
Sbjct: 236 SSA-ASAANAAIDHVRDWVTGTP--EGDWVSMGVYSDGNPYGIPEGIIFSFPVTCKGDGE 292

Query: 318 EEIFQLGPLNEYERIGLEKAKKEL 341
            EI +  PL+++ R  L+  + EL
Sbjct: 293 WEIVEGLPLDDFVRGKLDATEDEL 316

This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms. Length = 323

>gnl|CDD|133426 cd05290, LDH_3, A subgroup of L-lactate dehydrogenases

 Score = 73.9 bits (182), Expect = 6e-15
 Identities = 57/193 (29%), Positives = 82/193 (42%), Gaps = 31/193 (16%)

Query: 107 ALTGMDLVIIPAGVPRKPGMT--RDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNS 164
                D+++I AG    PG T  R DL   NA I+R +   I K    A + LI+NP++ 
Sbjct: 65  DCADADIIVITAGPSIDPGNTDDRLDLAQTNAKIIREIMGNITKVTKEAVIILITNPLDI 124

Query: 165 TVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTI 223
            V IAA  F     Y   K++G  TMLD  R    VA+  G+DP++V   V+G H G   
Sbjct: 125 AVYIAATEFD----YPANKVIGTGTMLDTARLRRIVADKYGVDPKNVTGYVLGEH-GSHA 179

Query: 224 LPLLSQV---------------KPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSATLS 268
            P+ S V               K P        + L   +     +V   K G  +A ++
Sbjct: 180 FPVWSLVNIAGLPLDELEALFGKEPID-----KDELLEEVVQAAYDVFNRK-GWTNAGIA 233

Query: 269 MAYAAVKFADACL 281
              +A +   A L
Sbjct: 234 K--SASRLIKAIL 244

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of some bacterial LDHs from firmicutes, gammaproteobacteria, and actinobacteria. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenase, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. Length = 307

>gnl|CDD|133429 cd05293, LDH_1, A subgroup of L-lactate dehydrogenases

 Score = 70.7 bits (174), Expect = 9e-14
 Identities = 82/337 (24%), Positives = 135/337 (40%), Gaps = 57/337 (16%)

Query: 42  GFKVAILGA-AGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGF 98
             KV ++G    G+   +++L K   L   L L DVV     G   D+ H   G+    F
Sbjct: 3   RNKVTVVGVGQVGMACAISILAK--GLADELVLVDVVEDKLKGEAMDLQH---GSA---F 54

Query: 99  LGQPQLE-----NALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNA 153
           L  P++E     +      +VI+ AG  +  G +R DL   N  I + +   + K  PNA
Sbjct: 55  LKNPKIEADKDYSVTANSKVVIVTAGARQNEGESRLDLVQRNVDIFKGIIPKLVKYSPNA 114

Query: 154 TVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRANTFVAEVLGLDPRDVDV 212
            + ++SNPV+    I   V  K       +++G    LD  R    +AE LG+ P  V  
Sbjct: 115 ILLVVSNPVD----IMTYVAWKLSGLPKHRVIGSGCNLDSARFRYLIAERLGVAPSSVHG 170

Query: 213 PVVGGH--------AGVTI--LPLLSQVKPPCSFTQEETEY-LTNRIQNGGTEVVEAKAG 261
            ++G H        +GV +  + L        +    E    +  ++ +   EV++ K  
Sbjct: 171 WIIGEHGDSSVPVWSGVNVAGVRLQDLNPDIGTDKDPEKWKEVHKQVVDSAYEVIKLK-- 228

Query: 262 AGSATLSMAYAAVKFADACLRGLR----------GDAGVVECAFVASQVTELPFFASKVR 311
            G  + ++  +     DA LR             G  G+ +  F++     LP       
Sbjct: 229 -GYTSWAIGLSVADLVDAILRNTGRVHSVSTLVKGLHGIEDEVFLS-----LP-----CI 277

Query: 312 LGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSIQKG 348
           LG  G   + +  PL E E+  L+K+   L   +QK 
Sbjct: 278 LGENGITHVIKQ-PLTEEEQEKLQKSADTLW-EVQKQ 312

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. Length = 312

>gnl|CDD|130819 TIGR01758, MDH_euk_cyt, malate dehydrogenase, NAD-dependent

 Score = 70.3 bits (172), Expect = 2e-13
 Identities = 69/254 (27%), Positives = 104/254 (40%), Gaps = 31/254 (12%)

Query: 44  KVAILGAAGGIGQPLA-------MLMKINPLVSVLHLYDVVNTPGVTADISH--MDTG-A 93
           +V + GAAG IG  L        ML K  P++  LHL D+     V   +    MD    
Sbjct: 1   RVVVTGAAGQIGYALLPMIARGRMLGKDQPII--LHLLDIPPAMKVLEGVVMELMDCAFP 58

Query: 94  VVRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAK-CCPN 152
           ++ G +       A T +D+ I+    PRK GM R DL + N  I +     + K    +
Sbjct: 59  LLDGVVPTHDPAVAFTDVDVAILVGAFPRKEGMERRDLLSKNVKIFKEQGRALDKLAKKD 118

Query: 153 ATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDV-D 211
             V ++ NP N+   + +     A +  PK    +T LD  RA   VAE  G+   DV +
Sbjct: 119 CKVLVVGNPANTNALVLSNY---APSIPPKNFSALTRLDHNRALAQVAERAGVPVSDVKN 175

Query: 212 VPVVGGHAGVTILPLLSQVKPPCSFTQEETEYLTNR-----------IQNGGTEVVEAKA 260
           V + G H+  T  P ++         Q+                   +Q  G  ++ A+ 
Sbjct: 176 VIIWGNHSS-TQYPDVNHATVTKGGKQKPVREAIKDDAYLDGEFITTVQQRGAAIIRAR- 233

Query: 261 GAGSATLSMAYAAV 274
              S+ LS A AAV
Sbjct: 234 -KLSSALSAAKAAV 246

This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography. Length = 324

>gnl|CDD|178836 PRK00066, ldh, L-lactate dehydrogenase; Reviewed

 Score = 68.0 bits (167), Expect = 7e-13
 Identities = 64/251 (25%), Positives = 107/251 (42%), Gaps = 36/251 (14%)

Query: 110 GMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIA 169
             DLV+I AG P+KPG TR DL   N  I +++   +     +    + SNPV+    I 
Sbjct: 73  DADLVVITAGAPQKPGETRLDLVEKNLKIFKSIVGEVMASGFDGIFLVASNPVD----IL 128

Query: 170 AEVFKKAGTYDPKKLLGV-TMLDVVRANTFVAEVLGLDPRDVDVPVVGGH---------- 218
                K   +  ++++G  T LD  R    ++E L +DPR V   ++G H          
Sbjct: 129 TYATWKLSGFPKERVIGSGTSLDSARFRYMLSEKLDVDPRSVHAYIIGEHGDTEFPVWSH 188

Query: 219 AGVTILPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFA- 277
           A V  +PL   ++    + +E+ + +   +++   E++E K GA    ++MA A +  A 
Sbjct: 189 ANVAGVPLEEYLEENEQYDEEDLDEIFENVRDAAYEIIEKK-GATYYGIAMALARITKAI 247

Query: 278 ----DACL---RGLRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQLGPLNEYE 330
               +A L     L G  G  +            +      + R G  EI +L PLN+ E
Sbjct: 248 LNNENAVLPVSAYLEGQYGEEDV-----------YIGVPAVVNRNGIREIVEL-PLNDDE 295

Query: 331 RIGLEKAKKEL 341
           +     +   L
Sbjct: 296 KQKFAHSADVL 306

Length = 315

>gnl|CDD|178212 PLN02602, PLN02602, lactate dehydrogenase

 Score = 67.5 bits (165), Expect = 2e-12
 Identities = 82/326 (25%), Positives = 140/326 (42%), Gaps = 39/326 (11%)

Query: 44  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVV--NTPGVTADISHMDTGAVVRGFLGQ 101
           KV+++G  G +G  +A  +    L   L L DV      G   D+ H         FL +
Sbjct: 39  KVSVVGV-GNVGMAIAQTILTQDLADELALVDVNPDKLRGEMLDLQH------AAAFLPR 91

Query: 102 PQL----ENALT-GMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVN 156
            ++    + A+T G DL I+ AG  + PG +R +L   N  + R +   +AK  P+  + 
Sbjct: 92  TKILASTDYAVTAGSDLCIVTAGARQIPGESRLNLLQRNVALFRKIIPELAKYSPDTILL 151

Query: 157 LISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRANTFVAEVLGLDPRDVDVPVV 215
           ++SNPV+    +A   +K +G +   +++G  T LD  R    +A+ L ++ +DV   +V
Sbjct: 152 IVSNPVDVLTYVA---WKLSG-FPANRVIGSGTNLDSSRFRFLIADHLDVNAQDVQAYIV 207

Query: 216 GGH-------------AGVTILPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGA 262
           G H              GV +L  L   K   ++ +E  E +   + +   EV++ K   
Sbjct: 208 GEHGDSSVALWSSVSVGGVPVLSFLE--KQQIAYEKETLEEIHRAVVDSAYEVIKLK--- 262

Query: 263 GSATLSMAYAAVKFADACLRGLRGDAGVVECAFVASQVTELPFFAS-KVRLGRQGAEEIF 321
           G  + ++ Y+      + LR  R    V   A     + E   F S   +LGR G   + 
Sbjct: 263 GYTSWAIGYSVASLVRSLLRDQRRIHPVSVLAKGFHGIDEGDVFLSLPAQLGRNGVLGVV 322

Query: 322 QLGPLNEYERIGLEKAKKELAGSIQK 347
            +  L + E   L K+ K L     +
Sbjct: 323 NV-HLTDEEAERLRKSAKTLWEVQSQ 347

Length = 350

>gnl|CDD|133421 cd01336, MDH_cytoplasmic_cytosolic, Cytoplasmic and cytosolic Malate dehydrogenases

 Score = 64.2 bits (157), Expect = 2e-11
 Identities = 64/255 (25%), Positives = 105/255 (41%), Gaps = 33/255 (12%)

Query: 44  KVAILGAAGGIGQPLA-------MLMKINPLVSVLHLYDVVNTPGVTADIS-HMDTGA-- 93
           +V + GAAG I   L        +     P++  LHL D+         +   +   A  
Sbjct: 4   RVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVI--LHLLDIPPALKALEGVVMELQDCAFP 61

Query: 94  VVRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PN 152
           +++  +     E A   +D+ I+   +PRK GM R DL   N  I +   E + K    N
Sbjct: 62  LLKSVVATTDPEEAFKDVDVAILVGAMPRKEGMERKDLLKANVKIFKEQGEALDKYAKKN 121

Query: 153 ATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDV-D 211
             V ++ NP N+   I     K A +   +    +T LD  RA + +A  LG+   DV +
Sbjct: 122 VKVLVVGNPANTNALILL---KYAPSIPKENFTALTRLDHNRAKSQIALKLGVPVSDVKN 178

Query: 212 VPVVGGHAGVTILPLLSQ--------VKPPCSFTQEETEYLTN----RIQNGGTEVVEAK 259
           V + G H+  T  P ++          KP     +++  +L       +Q  G  V++A+
Sbjct: 179 VIIWGNHSS-TQYPDVNHATVELNGKGKPAREAVKDD-AWLNGEFISTVQKRGAAVIKAR 236

Query: 260 AGAGSATLSMAYAAV 274
               SA +S A A  
Sbjct: 237 -KLSSA-MSAAKAIC 249

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. Length = 325

>gnl|CDD|130817 TIGR01756, LDH_protist, lactate dehydrogenase

 Score = 60.3 bits (146), Expect = 3e-10
 Identities = 37/135 (27%), Positives = 59/135 (43%), Gaps = 4/135 (2%)

Query: 97  GFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATV 155
           G +   +LE A   +D   + A VP KPG  R DL   N  I +   E +++   P   V
Sbjct: 47  GTIVTTKLEEAFKDIDCAFLVASVPLKPGEVRADLLTKNTPIFKATGEALSEYAKPTVKV 106

Query: 156 NLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVV 215
            +I NPVN+   +A      A     +    + MLD  RA + +A  L +    +   VV
Sbjct: 107 LVIGNPVNTNCLVA---MLHAPKLSAENFSSLCMLDHNRAVSRIASKLKVPVDHIYHVVV 163

Query: 216 GGHAGVTILPLLSQV 230
            G+   +++  L+  
Sbjct: 164 WGNHAESMVADLTHA 178

This model represents a family of protist lactate dehydrogenases which have aparrently evolved from a recent protist malate dehydrogenase ancestor. Lactate dehydrogenase converts the hydroxyl at C-2 of lactate to a carbonyl in the product, pyruvate. The preference of this enzyme for NAD or NADP has not been determined. A critical residue in malate dehydrogenase, arginine-91 (T. vaginalis numbering) has been mutated to a leucine, eliminating the positive charge which complemeted the carboxylate in malate which is absent in lactate. Several other more subtle changes are proposed to make the active site smaller to accomadate the less bulky lactate molecule. Length = 313

>gnl|CDD|177744 PLN00135, PLN00135, malate dehydrogenase

 Score = 53.2 bits (128), Expect = 6e-08
 Identities = 46/175 (26%), Positives = 83/175 (47%), Gaps = 17/175 (9%)

Query: 49  GAAGGIGQPLAM-LMKINPLVSVLHLYDVVNTPGVTADISHMDTG-AVVRGFLGQPQLEN 106
           G   G  QP+ + ++ I P    L+        GV  ++  +D    +++G +    +  
Sbjct: 5   GVMLGPDQPVILHMLDIPPAAEALN--------GVKMEL--IDAAFPLLKGVVATTDVVE 54

Query: 107 ALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNST 165
           A  G+++ ++  G PRK GM R D+ + N  I ++    + K   P+  V +++NP N+ 
Sbjct: 55  ACKGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKSQASALEKHAAPDCKVLVVANPANTN 114

Query: 166 VPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDV-DVPVVGGHA 219
             I  E    A +   K +  +T LD  RA   ++E LG+   DV +V + G H+
Sbjct: 115 ALILKEF---APSIPEKNITCLTRLDHNRALGQISERLGVPVSDVKNVIIWGNHS 166

Length = 309

>gnl|CDD|133423 cd01338, MDH_choloroplast_like, Chloroplast-like malate dehydrogenases

 Score = 53.0 bits (128), Expect = 8e-08
 Identities = 63/252 (25%), Positives = 101/252 (40%), Gaps = 31/252 (12%)

Query: 44  KVAILGAAGGIGQPL-------AMLMKINPLVSVLHLYDVVNT----PGVTADISHMDTG 92
           +VA+ GAAG IG  L        M     P++  L L ++        GV  ++   +  
Sbjct: 4   RVAVTGAAGQIGYSLLFRIASGEMFGPDQPVI--LQLLELPQALKALEGVAMEL---EDC 58

Query: 93  A--VVRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAK-C 149
           A  ++   +       A    D  ++    PR PGM R DL   N  I     + +    
Sbjct: 59  AFPLLAEIVITDDPNVAFKDADWALLVGAKPRGPGMERADLLKANGKIFTAQGKALNDVA 118

Query: 150 CPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRD 209
             +  V ++ NP N+   IA    K A    P     +T LD  RA + +A+  G+   D
Sbjct: 119 SRDVKVLVVGNPCNTNALIAM---KNAPDIPPDNFTAMTRLDHNRAKSQLAKKAGVPVTD 175

Query: 210 VDVPVVGGHAGVTILPLLSQVK---PPCSFTQEETEYLTN----RIQNGGTEVVEAKAGA 262
           V   V+ G+   T  P  +       P +    +  +L +     +Q  G  +++A+ GA
Sbjct: 176 VKNMVIWGNHSPTQYPDFTNATIGGKPAAEVINDRAWLEDEFIPTVQKRGAAIIKAR-GA 234

Query: 263 GSATLSMAYAAV 274
            SA  S A AA+
Sbjct: 235 SSAA-SAANAAI 245

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. Length = 322

>gnl|CDD|235468 PRK05442, PRK05442, malate dehydrogenase; Provisional

 Score = 46.3 bits (111), Expect = 1e-05
 Identities = 68/253 (26%), Positives = 107/253 (42%), Gaps = 33/253 (13%)

Query: 44  KVAILGAAGGIGQPL-------AMLMKINPLVSVLHLYDVVNTPGVTA---DISHMDTGA 93
           +VA+ GAAG IG  L        ML K  P++  L L ++   P + A    +  +D  A
Sbjct: 6   RVAVTGAAGQIGYSLLFRIASGDMLGKDQPVI--LQLLEI--PPALKALEGVVMELDDCA 61

Query: 94  --VVRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC- 150
             ++ G +       A    D+ ++    PR PGM R DL   N  I     + + +   
Sbjct: 62  FPLLAGVVITDDPNVAFKDADVALLVGARPRGPGMERKDLLEANGAIFTAQGKALNEVAA 121

Query: 151 PNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDV 210
            +  V ++ NP N+   IA    K A     +    +T LD  RA + +A   G+   D+
Sbjct: 122 RDVKVLVVGNPANTNALIAM---KNAPDLPAENFTAMTRLDHNRALSQLAAKAGVPVADI 178

Query: 211 -DVPVVGGHAGVTILPLLSQV----KPPCSFTQEETEYLTN----RIQNGGTEVVEAKAG 261
             + V G H+  T  P         KP      ++  +L +     +Q  G  ++EA+ G
Sbjct: 179 KKMTVWGNHSA-TQYPDFRHATIDGKPAAEVINDQ-AWLEDTFIPTVQKRGAAIIEAR-G 235

Query: 262 AGSATLSMAYAAV 274
           A SA  S A AA+
Sbjct: 236 ASSAA-SAANAAI 247

Length = 326

>gnl|CDD|215060 PLN00112, PLN00112, malate dehydrogenase (NADP); Provisional

 Score = 39.4 bits (92), Expect = 0.002
 Identities = 28/79 (35%), Positives = 35/79 (44%), Gaps = 10/79 (12%)

Query: 121 PRKPGMTRDDLFNINAGIV----RTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKA 176
           PR PGM R DL +IN  I     + L E +A    N  V ++ NP N+   I     K A
Sbjct: 187 PRGPGMERADLLDINGQIFAEQGKALNE-VAS--RNVKVIVVGNPCNTNALIC---LKNA 240

Query: 177 GTYDPKKLLGVTMLDVVRA 195
                K    +T LD  RA
Sbjct: 241 PNIPAKNFHALTRLDENRA 259

Length = 444

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	354
cd01337	310	MDH_glyoxysomal_mitochondrial Glyoxysomal and mito	100.0
TIGR01772	312	MDH_euk_gproteo malate dehydrogenase, NAD-dependen	100.0
COG0039	313	Mdh Malate/lactate dehydrogenases [Energy producti	100.0
PLN00106	323	malate dehydrogenase	100.0
PTZ00325	321	malate dehydrogenase; Provisional	100.0
cd05290	307	LDH_3 A subgroup of L-lactate dehydrogenases. L-la	100.0
KOG1495	332	consensus Lactate dehydrogenase [Energy production	100.0
PRK05086	312	malate dehydrogenase; Provisional	100.0
PLN02602	350	lactate dehydrogenase	100.0
TIGR01759	323	MalateDH-SF1 malate dehydrogenase. This model repr	100.0
cd05293	312	LDH_1 A subgroup of L-lactate dehydrogenases. L-la	100.0
PRK00066	315	ldh L-lactate dehydrogenase; Reviewed	100.0
TIGR01771	299	L-LDH-NAD L-lactate dehydrogenase. This model repr	100.0
PRK05442	326	malate dehydrogenase; Provisional	100.0
cd00704	323	MDH Malate dehydrogenase. Malate dehydrogenase (MD	100.0
PLN00112	444	malate dehydrogenase (NADP); Provisional	100.0
TIGR01757	387	Malate-DH_plant malate dehydrogenase, NADP-depende	100.0
PTZ00117	319	malate dehydrogenase; Provisional	100.0
cd05291	306	HicDH_like L-2-hydroxyisocapronate dehydrogenases	100.0
cd01338	322	MDH_choloroplast_like Chloroplast-like malate dehy	100.0
PTZ00082	321	L-lactate dehydrogenase; Provisional	100.0
KOG1494	345	consensus NAD-dependent malate dehydrogenase [Ener	100.0
cd00300	300	LDH_like L-lactate dehydrogenase-like enzymes. Mem	100.0
TIGR01763	305	MalateDH_bact malate dehydrogenase, NAD-dependent.	100.0
cd05292	308	LDH_2 A subgroup of L-lactate dehydrogenases. L-la	100.0
TIGR01758	324	MDH_euk_cyt malate dehydrogenase, NAD-dependent. T	100.0
cd01336	325	MDH_cytoplasmic_cytosolic Cytoplasmic and cytosoli	100.0
cd01339	300	LDH-like_MDH L-lactate dehydrogenase-like malate d	100.0
PRK06223	307	malate dehydrogenase; Reviewed	100.0
cd05294	309	LDH-like_MDH_nadp A lactate dehydrogenases-like st	100.0
PLN00135	309	malate dehydrogenase	100.0
cd05295	452	MDH_like Malate dehydrogenase-like. These MDH-like	100.0
TIGR01756	313	LDH_protist lactate dehydrogenase. This model repr	100.0
cd00650	263	LDH_MDH_like NAD-dependent, lactate dehydrogenase-	100.0
KOG1496	332	consensus Malate dehydrogenase [Energy production	100.0
PF02866	174	Ldh_1_C: lactate/malate dehydrogenase, alpha/beta	100.0
PF00056	141	Ldh_1_N: lactate/malate dehydrogenase, NAD binding	99.97
cd05197	425	GH4_glycoside_hydrolases Glycoside Hydrases Family	99.97
PRK15076	431	alpha-galactosidase; Provisional	99.97
cd05296	419	GH4_P_beta_glucosidase Glycoside Hydrolases Family	99.97
cd05298	437	GH4_GlvA_pagL_like Glycoside Hydrolases Family 4;	99.96
COG1486	442	CelF Alpha-galactosidases/6-phospho-beta-glucosida	99.95
cd05297	423	GH4_alpha_glucosidase_galactosidase Glycoside Hydr	99.94
PF02056	183	Glyco_hydro_4: Family 4 glycosyl hydrolase; InterP	99.83
COG1004	414	Ugd Predicted UDP-glucose 6-dehydrogenase [Cell en	98.89
PF02737	180	3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD bind	98.73
COG1250	307	FadB 3-hydroxyacyl-CoA dehydrogenase [Lipid metabo	98.72
PF01073	280	3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso	98.66
PRK07066	321	3-hydroxybutyryl-CoA dehydrogenase; Validated	98.58
PLN02166	436	dTDP-glucose 4,6-dehydratase	98.57
COG1086	588	Predicted nucleoside-diphosphate sugar epimerases	98.56
PRK07819	286	3-hydroxybutyryl-CoA dehydrogenase; Validated	98.52
PRK15181	348	Vi polysaccharide biosynthesis protein TviC; Provi	98.52
PF03721	185	UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogen	98.5
PF02719	293	Polysacc_synt_2: Polysaccharide biosynthesis prote	98.5
TIGR02441	737	fa_ox_alpha_mit fatty acid oxidation complex, alph	98.46
TIGR02437	714	FadB fatty oxidation complex, alpha subunit FadB.	98.44
PRK11730	715	fadB multifunctional fatty acid oxidation complex	98.44
TIGR01915	219	npdG NADPH-dependent F420 reductase. This model re	98.43
KOG2304	298	consensus 3-hydroxyacyl-CoA dehydrogenase [Lipid t	98.4
PLN02427	386	UDP-apiose/xylose synthase	98.4
PRK11154	708	fadJ multifunctional fatty acid oxidation complex	98.39
TIGR02440	699	FadJ fatty oxidation complex, alpha subunit FadJ.	98.39
PRK08293	287	3-hydroxybutyryl-CoA dehydrogenase; Validated	98.39
KOG1502	327	consensus Flavonol reductase/cinnamoyl-CoA reducta	98.33
PLN00198	338	anthocyanidin reductase; Provisional	98.32
PF01210	157	NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate	98.3
PLN02662	322	cinnamyl-alcohol dehydrogenase family protein	98.3
PLN02206	442	UDP-glucuronate decarboxylase	98.29
PLN02650	351	dihydroflavonol-4-reductase	98.27
COG1087	329	GalE UDP-glucose 4-epimerase [Cell envelope biogen	98.27
TIGR02622	349	CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member	98.27
PRK08125	660	bifunctional UDP-glucuronic acid decarboxylase/UDP	98.24
PLN02695	370	GDP-D-mannose-3',5'-epimerase	98.24
TIGR02279	503	PaaC-3OHAcCoADH 3-hydroxyacyl-CoA dehydrogenase Pa	98.22
PLN02353	473	probable UDP-glucose 6-dehydrogenase	98.22
PRK06035	291	3-hydroxyacyl-CoA dehydrogenase; Validated	98.22
TIGR01181	317	dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This	98.2
CHL00194	317	ycf39 Ycf39; Provisional	98.19
PRK05808	282	3-hydroxybutyryl-CoA dehydrogenase; Validated	98.19
PLN02214	342	cinnamoyl-CoA reductase	98.18
TIGR03589	324	PseB UDP-N-acetylglucosamine 4,6-dehydratase. This	98.17
PRK11908	347	NAD-dependent epimerase/dehydratase family protein	98.14
COG0451	314	WcaG Nucleoside-diphosphate-sugar epimerases [Cell	98.11
TIGR03466	328	HpnA hopanoid-associated sugar epimerase. The sequ	98.1
PRK08268	507	3-hydroxy-acyl-CoA dehydrogenase; Validated	98.1
PRK06130	311	3-hydroxybutyryl-CoA dehydrogenase; Validated	98.08
PLN02572	442	UDP-sulfoquinovose synthase	98.07
PRK07530	292	3-hydroxybutyryl-CoA dehydrogenase; Validated	98.07
PRK10084	352	dTDP-glucose 4,6 dehydratase; Provisional	98.06
PRK09260	288	3-hydroxybutyryl-CoA dehydrogenase; Validated	98.04
PRK06129	308	3-hydroxyacyl-CoA dehydrogenase; Validated	98.04
PLN02545	295	3-hydroxybutyryl-CoA dehydrogenase	98.03
TIGR01472	343	gmd GDP-mannose 4,6-dehydratase. Excluded from thi	98.03
PRK10217	355	dTDP-glucose 4,6-dehydratase; Provisional	98.03
PRK06194	287	hypothetical protein; Provisional	98.02
PLN02896	353	cinnamyl-alcohol dehydrogenase	98.02
PRK07531	495	bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioe	98.02
PLN02778	298	3,5-epimerase/4-reductase	98.01
PRK10675	338	UDP-galactose-4-epimerase; Provisional	98.01
PLN02989	325	cinnamyl-alcohol dehydrogenase family protein	97.98
COG0240	329	GpsA Glycerol-3-phosphate dehydrogenase [Energy pr	97.98
PLN02260	668	probable rhamnose biosynthetic enzyme	97.97
PF13460	183	NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X	97.92
PLN02583	297	cinnamoyl-CoA reductase	97.91
PLN03209	576	translocon at the inner envelope of chloroplast su	97.91
PLN02986	322	cinnamyl-alcohol dehydrogenase family protein	97.9
TIGR03026	411	NDP-sugDHase nucleotide sugar dehydrogenase. All o	97.88
PRK15057	388	UDP-glucose 6-dehydrogenase; Provisional	97.87
PLN02653	340	GDP-mannose 4,6-dehydratase	97.87
TIGR01777	292	yfcH conserved hypothetical protein TIGR01777. Thi	97.87
COG1088	340	RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope	97.87
PF03807	96	F420_oxidored: NADP oxidoreductase coenzyme F420-d	97.85
COG2085	211	Predicted dinucleotide-binding enzymes [General fu	97.85
KOG1429	350	consensus dTDP-glucose 4-6-dehydratase/UDP-glucuro	97.82
PRK09987	299	dTDP-4-dehydrorhamnose reductase; Provisional	97.8
PRK06522	304	2-dehydropantoate 2-reductase; Reviewed	97.77
PRK07201	657	short chain dehydrogenase; Provisional	97.74
PRK00094	325	gpsA NAD(P)H-dependent glycerol-3-phosphate dehydr	97.73
PRK12921	305	2-dehydropantoate 2-reductase; Provisional	97.71
PLN02253	280	xanthoxin dehydrogenase	97.71
PRK14619	308	NAD(P)H-dependent glycerol-3-phosphate dehydrogena	97.69
PRK11150	308	rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro	97.68
PLN02240	352	UDP-glucose 4-epimerase	97.67
PRK13394	262	3-hydroxybutyrate dehydrogenase; Provisional	97.66
KOG1430	361	consensus C-3 sterol dehydrogenase/3-beta-hydroxys	97.65
PTZ00345	365	glycerol-3-phosphate dehydrogenase; Provisional	97.65
TIGR01214	287	rmlD dTDP-4-dehydrorhamnose reductase. This enzyme	97.65
PLN02657	390	3,8-divinyl protochlorophyllide a 8-vinyl reductas	97.64
PRK08229	341	2-dehydropantoate 2-reductase; Provisional	97.64
PF03446	163	NAD_binding_2: NAD binding domain of 6-phosphogluc	97.64
PRK05865	854	hypothetical protein; Provisional	97.62
PRK08643	256	acetoin reductase; Validated	97.61
PLN02686	367	cinnamoyl-CoA reductase	97.61
PF01370	236	Epimerase: NAD dependent epimerase/dehydratase fam	97.59
TIGR02197	314	heptose_epim ADP-L-glycero-D-manno-heptose-6-epime	97.59
COG1748	389	LYS9 Saccharopine dehydrogenase and related protei	97.57
PRK14620	326	NAD(P)H-dependent glycerol-3-phosphate dehydrogena	97.56
PRK06249	313	2-dehydropantoate 2-reductase; Provisional	97.56
PRK14618	328	NAD(P)H-dependent glycerol-3-phosphate dehydrogena	97.56
PRK05866	293	short chain dehydrogenase; Provisional	97.55
PRK12384	259	sorbitol-6-phosphate dehydrogenase; Provisional	97.54
PRK15182	425	Vi polysaccharide biosynthesis protein TviB; Provi	97.54
PRK08267	260	short chain dehydrogenase; Provisional	97.54
TIGR01179	328	galE UDP-glucose-4-epimerase. This enzyme intercon	97.53
PRK12320	699	hypothetical protein; Provisional	97.53
PRK07523	255	gluconate 5-dehydrogenase; Provisional	97.52
PRK05717	255	oxidoreductase; Validated	97.51
PRK11064	415	wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Pro	97.49
PRK12829	264	short chain dehydrogenase; Provisional	97.49
TIGR03376	342	glycerol3P_DH glycerol-3-phosphate dehydrogenase (	97.48
PRK12429	258	3-hydroxybutyrate dehydrogenase; Provisional	97.48
PRK12937	245	short chain dehydrogenase; Provisional	97.48
PRK07102	243	short chain dehydrogenase; Provisional	97.47
PRK12439	341	NAD(P)H-dependent glycerol-3-phosphate dehydrogena	97.47
PRK07231	251	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.47
PRK07326	237	short chain dehydrogenase; Provisional	97.47
PRK07814	263	short chain dehydrogenase; Provisional	97.44
PRK08340	259	glucose-1-dehydrogenase; Provisional	97.44
PRK06180	277	short chain dehydrogenase; Provisional	97.43
PRK06924	251	short chain dehydrogenase; Provisional	97.43
PRK14982	340	acyl-ACP reductase; Provisional	97.43
PRK05876	275	short chain dehydrogenase; Provisional	97.41
PF10727	127	Rossmann-like: Rossmann-like domain; InterPro: IPR	97.4
PRK07576	264	short chain dehydrogenase; Provisional	97.39
PRK06482	276	short chain dehydrogenase; Provisional	97.37
PRK07806	248	short chain dehydrogenase; Provisional	97.37
PLN00141	251	Tic62-NAD(P)-related group II protein; Provisional	97.37
PRK10538	248	malonic semialdehyde reductase; Provisional	97.37
PRK12827	249	short chain dehydrogenase; Provisional	97.36
PRK07417	279	arogenate dehydrogenase; Reviewed	97.35
PRK07666	239	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.35
PRK07069	251	short chain dehydrogenase; Validated	97.35
PRK06172	253	short chain dehydrogenase; Provisional	97.34
PRK09135	249	pteridine reductase; Provisional	97.34
PRK07067	257	sorbitol dehydrogenase; Provisional	97.34
TIGR01832	248	kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod	97.33
PRK05875	276	short chain dehydrogenase; Provisional	97.33
PRK08278	273	short chain dehydrogenase; Provisional	97.33
PRK12828	239	short chain dehydrogenase; Provisional	97.32
PRK06124	256	gluconate 5-dehydrogenase; Provisional	97.31
TIGR01746	367	Thioester-redct thioester reductase domain. It has	97.3
PLN02996	491	fatty acyl-CoA reductase	97.3
PRK07832	272	short chain dehydrogenase; Provisional	97.3
TIGR03206	250	benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr	97.29
PRK08945	247	putative oxoacyl-(acyl carrier protein) reductase;	97.29
PRK08265	261	short chain dehydrogenase; Provisional	97.28
PRK06914	280	short chain dehydrogenase; Provisional	97.28
PRK06181	263	short chain dehydrogenase; Provisional	97.26
PRK12936	245	3-ketoacyl-(acyl-carrier-protein) reductase NodG;	97.26
PRK12939	250	short chain dehydrogenase; Provisional	97.26
COG0300	265	DltE Short-chain dehydrogenases of various substra	97.24
PRK12746	254	short chain dehydrogenase; Provisional	97.23
PRK07856	252	short chain dehydrogenase; Provisional	97.22
PRK07890	258	short chain dehydrogenase; Provisional	97.22
TIGR01830	239	3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re	97.22
PRK12745	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	97.22
PRK07502	307	cyclohexadienyl dehydrogenase; Validated	97.21
PRK06128	300	oxidoreductase; Provisional	97.21
PRK06182	273	short chain dehydrogenase; Validated	97.19
TIGR02354	200	thiF_fam2 thiamine biosynthesis protein ThiF, fami	97.18
PRK08213	259	gluconate 5-dehydrogenase; Provisional	97.17
PRK06701	290	short chain dehydrogenase; Provisional	97.17
PRK07024	257	short chain dehydrogenase; Provisional	97.17
PRK06138	252	short chain dehydrogenase; Provisional	97.16
PRK12826	251	3-ketoacyl-(acyl-carrier-protein) reductase; Revie	97.16
PRK09291	257	short chain dehydrogenase; Provisional	97.16
TIGR00872	298	gnd_rel 6-phosphogluconate dehydrogenase (decarbox	97.16
PLN02725	306	GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas	97.15
PRK07774	250	short chain dehydrogenase; Provisional	97.15
PRK08655	437	prephenate dehydrogenase; Provisional	97.15
COG4221	246	Short-chain alcohol dehydrogenase of unknown speci	97.13
PRK06841	255	short chain dehydrogenase; Provisional	97.13
PLN02688	266	pyrroline-5-carboxylate reductase	97.12
PRK12935	247	acetoacetyl-CoA reductase; Provisional	97.12
PRK06101	240	short chain dehydrogenase; Provisional	97.11
PRK06179	270	short chain dehydrogenase; Provisional	97.11
TIGR01963	255	PHB_DH 3-hydroxybutyrate dehydrogenase. This model	97.11
PRK05650	270	short chain dehydrogenase; Provisional	97.11
PF04321	286	RmlD_sub_bind: RmlD substrate binding domain; Inte	97.11
PRK08085	254	gluconate 5-dehydrogenase; Provisional	97.1
PRK12481	251	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	97.1
PRK07097	265	gluconate 5-dehydrogenase; Provisional	97.1
PRK07680	273	late competence protein ComER; Validated	97.1
PRK08993	253	2-deoxy-D-gluconate 3-dehydrogenase; Validated	97.1
PRK11880	267	pyrroline-5-carboxylate reductase; Reviewed	97.09
PRK05854	313	short chain dehydrogenase; Provisional	97.09
PRK08589	272	short chain dehydrogenase; Validated	97.09
PRK07063	260	short chain dehydrogenase; Provisional	97.09
PF01118	121	Semialdhyde_dh: Semialdehyde dehydrogenase, NAD bi	97.09
PLN02260	668	probable rhamnose biosynthetic enzyme	97.09
PLN00016	378	RNA-binding protein; Provisional	97.07
TIGR03325	262	BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro	97.07
COG2084	286	MmsB 3-hydroxyisobutyrate dehydrogenase and relate	97.07
PRK12825	249	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.06
PRK06935	258	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	97.05
PRK05855	582	short chain dehydrogenase; Validated	97.05
PRK06113	255	7-alpha-hydroxysteroid dehydrogenase; Validated	97.05
COG2910	211	Putative NADH-flavin reductase [General function p	97.04
PRK07424	406	bifunctional sterol desaturase/short chain dehydro	97.04
PRK05653	246	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.04
PRK07109	334	short chain dehydrogenase; Provisional	97.03
TIGR02415	254	23BDH acetoin reductases. One member of this famil	97.02
PRK07478	254	short chain dehydrogenase; Provisional	97.02
TIGR01505	291	tartro_sem_red 2-hydroxy-3-oxopropionate reductase	97.02
PRK11559	296	garR tartronate semialdehyde reductase; Provisiona	97.02
PRK05557	248	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.02
PRK06545	359	prephenate dehydrogenase; Validated	97.02
PRK08642	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.01
PRK12823	260	benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat	97.01
PRK08277	278	D-mannonate oxidoreductase; Provisional	97.0
PRK06197	306	short chain dehydrogenase; Provisional	96.99
PRK06500	249	short chain dehydrogenase; Provisional	96.99
PRK06949	258	short chain dehydrogenase; Provisional	96.99
PRK05993	277	short chain dehydrogenase; Provisional	96.99
PRK08628	258	short chain dehydrogenase; Provisional	96.99
PRK05565	247	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.99
COG0677	436	WecC UDP-N-acetyl-D-mannosaminuronate dehydrogenas	96.98
PRK07825	273	short chain dehydrogenase; Provisional	96.98
PRK06198	260	short chain dehydrogenase; Provisional	96.98
PRK08226	263	short chain dehydrogenase; Provisional	96.98
COG1090	297	Predicted nucleoside-diphosphate sugar epimerase [	96.98
PRK08339	263	short chain dehydrogenase; Provisional	96.97
PF11975	232	Glyco_hydro_4C: Family 4 glycosyl hydrolase C-term	96.97
PRK08263	275	short chain dehydrogenase; Provisional	96.95
PRK06398	258	aldose dehydrogenase; Validated	96.95
PRK12549	284	shikimate 5-dehydrogenase; Reviewed	96.95
TIGR02632	676	RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc	96.95
PRK07985	294	oxidoreductase; Provisional	96.95
PRK12480	330	D-lactate dehydrogenase; Provisional	96.95
PRK07035	252	short chain dehydrogenase; Provisional	96.93
PRK07634	245	pyrroline-5-carboxylate reductase; Reviewed	96.93
PF05368	233	NmrA: NmrA-like family; InterPro: IPR008030 NmrA i	96.93
PRK08269	314	3-hydroxybutyryl-CoA dehydrogenase; Validated	96.92
PRK09242	257	tropinone reductase; Provisional	96.91
PRK07453	322	protochlorophyllide oxidoreductase; Validated	96.91
PRK08264	238	short chain dehydrogenase; Validated	96.9
PRK07060	245	short chain dehydrogenase; Provisional	96.9
PRK12367	245	short chain dehydrogenase; Provisional	96.9
PRK12744	257	short chain dehydrogenase; Provisional	96.89
PRK12743	256	oxidoreductase; Provisional	96.89
PRK12747	252	short chain dehydrogenase; Provisional	96.88
PRK09072	263	short chain dehydrogenase; Provisional	96.87
PRK06196	315	oxidoreductase; Provisional	96.86
PRK05867	253	short chain dehydrogenase; Provisional	96.86
PRK08936	261	glucose-1-dehydrogenase; Provisional	96.86
PRK12742	237	oxidoreductase; Provisional	96.86
PRK15461	296	NADH-dependent gamma-hydroxybutyrate dehydrogenase	96.85
PRK08507	275	prephenate dehydrogenase; Validated	96.85
PRK06139	330	short chain dehydrogenase; Provisional	96.85
PRK08063	250	enoyl-(acyl carrier protein) reductase; Provisiona	96.84
TIGR03649	285	ergot_EASG ergot alkaloid biosynthesis protein, AF	96.84
PRK06077	252	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.84
PRK08219	227	short chain dehydrogenase; Provisional	96.84
PRK07454	241	short chain dehydrogenase; Provisional	96.83
COG0569	225	TrkA K+ transport systems, NAD-binding component [	96.83
PRK07679	279	pyrroline-5-carboxylate reductase; Reviewed	96.83
PRK11199	374	tyrA bifunctional chorismate mutase/prephenate deh	96.83
PRK06928	277	pyrroline-5-carboxylate reductase; Reviewed	96.81
PLN02256	304	arogenate dehydrogenase	96.81
PF01488	135	Shikimate_DH: Shikimate / quinate 5-dehydrogenase;	96.8
PRK06947	248	glucose-1-dehydrogenase; Provisional	96.8
PRK06057	255	short chain dehydrogenase; Provisional	96.78
PRK05884	223	short chain dehydrogenase; Provisional	96.77
PRK09186	256	flagellin modification protein A; Provisional	96.76
PF03949	255	Malic_M: Malic enzyme, NAD binding domain; InterPr	96.75
PRK07074	257	short chain dehydrogenase; Provisional	96.75
PF02558	151	ApbA: Ketopantoate reductase PanE/ApbA; InterPro:	96.75
PRK07023	243	short chain dehydrogenase; Provisional	96.75
PRK09009	235	C factor cell-cell signaling protein; Provisional	96.75
PLN02780	320	ketoreductase/ oxidoreductase	96.75
PRK08251	248	short chain dehydrogenase; Provisional	96.75
PTZ00142	470	6-phosphogluconate dehydrogenase; Provisional	96.74
PRK06200	263	2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog	96.73
PRK07904	253	short chain dehydrogenase; Provisional	96.73
PRK06123	248	short chain dehydrogenase; Provisional	96.72
PRK12490	299	6-phosphogluconate dehydrogenase-like protein; Rev	96.72
PRK09134	258	short chain dehydrogenase; Provisional	96.71
TIGR01831	239	fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas	96.71
cd05312	279	NAD_bind_1_malic_enz NAD(P) binding domain of mali	96.71
PRK06171	266	sorbitol-6-phosphate 2-dehydrogenase; Provisional	96.69
PRK05693	274	short chain dehydrogenase; Provisional	96.67
PRK12491	272	pyrroline-5-carboxylate reductase; Reviewed	96.67
PRK07677	252	short chain dehydrogenase; Provisional	96.67
PRK08324	681	short chain dehydrogenase; Validated	96.67
PRK08220	252	2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated	96.66
PRK08703	239	short chain dehydrogenase; Provisional	96.66
cd01078	194	NAD_bind_H4MPT_DH NADP binding domain of methylene	96.65
COG1091	281	RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo	96.64
PRK13243	333	glyoxylate reductase; Reviewed	96.63
PRK07831	262	short chain dehydrogenase; Provisional	96.63
PRK06463	255	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.62
PRK05872	296	short chain dehydrogenase; Provisional	96.62
PRK06523	260	short chain dehydrogenase; Provisional	96.61
PRK07062	265	short chain dehydrogenase; Provisional	96.61
COG1893	307	ApbA Ketopantoate reductase [Coenzyme metabolism]	96.61
PRK09599	301	6-phosphogluconate dehydrogenase-like protein; Rev	96.61
PRK06114	254	short chain dehydrogenase; Provisional	96.6
PF00899	135	ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a	96.59
cd05213	311	NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain	96.59
PRK05599	246	hypothetical protein; Provisional	96.58
TIGR02685	267	pter_reduc_Leis pteridine reductase. Pteridine red	96.58
PRK08177	225	short chain dehydrogenase; Provisional	96.57
PRK07775	274	short chain dehydrogenase; Provisional	96.56
PRK07792	306	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.56
cd01065	155	NAD_bind_Shikimate_DH NAD(P) binding domain of Shi	96.55
PRK08416	260	7-alpha-hydroxysteroid dehydrogenase; Provisional	96.54
PRK07201	657	short chain dehydrogenase; Provisional	96.53
PRK06550	235	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.53
TIGR02356	202	adenyl_thiF thiazole biosynthesis adenylyltransfer	96.53
KOG1371	343	consensus UDP-glucose 4-epimerase/UDP-sulfoquinovo	96.53
PRK08217	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.52
PRK08818	370	prephenate dehydrogenase; Provisional	96.51
PRK15469	312	ghrA bifunctional glyoxylate/hydroxypyruvate reduc	96.5
PRK05786	238	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.5
KOG1205	282	consensus Predicted dehydrogenase [Secondary metab	96.5
cd01487	174	E1_ThiF_like E1_ThiF_like. Member of superfamily o	96.49
PRK05708	305	2-dehydropantoate 2-reductase; Provisional	96.48
PRK05479	330	ketol-acid reductoisomerase; Provisional	96.46
PLN02503	605	fatty acyl-CoA reductase 2	96.46
PTZ00431	260	pyrroline carboxylate reductase; Provisional	96.42
PRK14194	301	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.42
PRK12824	245	acetoacetyl-CoA reductase; Provisional	96.42
PRK07574	385	formate dehydrogenase; Provisional	96.41
PRK15059	292	tartronate semialdehyde reductase; Provisional	96.41
PRK07577	234	short chain dehydrogenase; Provisional	96.41
TIGR01829	242	AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy	96.4
PF01113	124	DapB_N: Dihydrodipicolinate reductase, N-terminus;	96.4
PRK12938	246	acetyacetyl-CoA reductase; Provisional	96.39
PRK07578	199	short chain dehydrogenase; Provisional	96.39
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.39
PRK08644	212	thiamine biosynthesis protein ThiF; Provisional	96.35
PLN02712	667	arogenate dehydrogenase	96.35
cd00762	254	NAD_bind_malic_enz NAD(P) binding domain of malic	96.31
COG0345	266	ProC Pyrroline-5-carboxylate reductase [Amino acid	96.31
PRK06483	236	dihydromonapterin reductase; Provisional	96.31
cd01483	143	E1_enzyme_family Superfamily of activating enzymes	96.28
PRK06940	275	short chain dehydrogenase; Provisional	96.26
PRK06476	258	pyrroline-5-carboxylate reductase; Reviewed	96.25
PLN03139	386	formate dehydrogenase; Provisional	96.24
COG1712	255	Predicted dinucleotide-utilizing enzyme [General f	96.24
PRK06953	222	short chain dehydrogenase; Provisional	96.23
TIGR02853	287	spore_dpaA dipicolinic acid synthetase, A subunit.	96.23
PRK06484	520	short chain dehydrogenase; Validated	96.22
PRK07984	262	enoyl-(acyl carrier protein) reductase; Provisiona	96.21
cd05311	226	NAD_bind_2_malic_enz NAD(P) binding domain of mali	96.21
PRK12475	338	thiamine/molybdopterin biosynthesis MoeB-like prot	96.2
PRK08605	332	D-lactate dehydrogenase; Validated	96.19
KOG2305	313	consensus 3-hydroxyacyl-CoA dehydrogenase [Lipid t	96.18
PF02826	178	2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy	96.17
COG0287	279	TyrA Prephenate dehydrogenase [Amino acid transpor	96.16
PRK06125	259	short chain dehydrogenase; Provisional	96.16
PRK08306	296	dipicolinate synthase subunit A; Reviewed	96.14
PRK06079	252	enoyl-(acyl carrier protein) reductase; Provisiona	96.12
PRK06718	202	precorrin-2 dehydrogenase; Reviewed	96.12
KOG2666	481	consensus UDP-glucose/GDP-mannose dehydrogenase [C	96.1
PRK14806	735	bifunctional cyclohexadienyl dehydrogenase/ 3-phos	96.09
PRK06484	520	short chain dehydrogenase; Validated	96.09
PRK13304	265	L-aspartate dehydrogenase; Reviewed	96.09
TIGR00873	467	gnd 6-phosphogluconate dehydrogenase, decarboxylat	96.08
PF03435	386	Saccharop_dh: Saccharopine dehydrogenase ; InterPr	96.05
PRK07688	339	thiamine/molybdopterin biosynthesis ThiF/MoeB-like	96.05
PRK00048	257	dihydrodipicolinate reductase; Provisional	96.04
cd00757	228	ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1	96.03
TIGR02371	325	ala_DH_arch alanine dehydrogenase, Archaeoglobus f	95.98
KOG4039	238	consensus Serine/threonine kinase TIP30/CC3 [Signa	95.96
PLN02928	347	oxidoreductase family protein	95.95
PRK13302	271	putative L-aspartate dehydrogenase; Provisional	95.94
PF02423	313	OCD_Mu_crystall: Ornithine cyclodeaminase/mu-cryst	95.91
PRK08291	330	ectoine utilization protein EutC; Validated	95.91
PLN02494	477	adenosylhomocysteinase	95.9
KOG1201	300	consensus Hydroxysteroid 17-beta dehydrogenase 11	95.88
TIGR01724	341	hmd_rel H2-forming N(5),N(10)-methenyltetrahydrome	95.87
PRK08303	305	short chain dehydrogenase; Provisional	95.84
PRK08017	256	oxidoreductase; Provisional	95.82
TIGR02355	240	moeB molybdopterin synthase sulfurylase MoeB. This	95.82
PF07993	249	NAD_binding_4: Male sterility protein; InterPro: I	95.82
PLN02350	493	phosphogluconate dehydrogenase (decarboxylating)	95.81
cd00401	413	AdoHcyase S-adenosyl-L-homocysteine hydrolase (Ado	95.8
PLN02712	667	arogenate dehydrogenase	95.79
TIGR01035	417	hemA glutamyl-tRNA reductase. This enzyme, togethe	95.78
PRK08618	325	ornithine cyclodeaminase; Validated	95.78
PRK06719	157	precorrin-2 dehydrogenase; Validated	95.77
PRK08862	227	short chain dehydrogenase; Provisional	95.77
TIGR00936	406	ahcY adenosylhomocysteinase. This enzyme hydrolyze	95.77
PRK07340	304	ornithine cyclodeaminase; Validated	95.76
TIGR01850	346	argC N-acetyl-gamma-glutamyl-phosphate reductase,	95.75
PRK07533	258	enoyl-(acyl carrier protein) reductase; Provisiona	95.73
PRK08223	287	hypothetical protein; Validated	95.72
TIGR00465	314	ilvC ketol-acid reductoisomerase. This is the seco	95.71
TIGR01470	205	cysG_Nterm siroheme synthase, N-terminal domain. T	95.7
PRK07041	230	short chain dehydrogenase; Provisional	95.7
PRK06603	260	enoyl-(acyl carrier protein) reductase; Provisiona	95.7
PRK05690	245	molybdopterin biosynthesis protein MoeB; Provision	95.66
PRK06141	314	ornithine cyclodeaminase; Validated	95.64
PRK08415	274	enoyl-(acyl carrier protein) reductase; Provisiona	95.63
cd01485	198	E1-1_like Ubiquitin activating enzyme (E1), repeat	95.61
TIGR01692	288	HIBADH 3-hydroxyisobutyrate dehydrogenase. This en	95.56
PTZ00075	476	Adenosylhomocysteinase; Provisional	95.56
TIGR02992	326	ectoine_eutC ectoine utilization protein EutC. Mem	95.56
TIGR01500	256	sepiapter_red sepiapterin reductase. This model de	95.55
PRK03659	601	glutathione-regulated potassium-efflux system prot	95.52
PRK09730	247	putative NAD(P)-binding oxidoreductase; Provisiona	95.46
PRK14106	450	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	95.46
PRK14874	334	aspartate-semialdehyde dehydrogenase; Provisional	95.46
PLN02968	381	Probable N-acetyl-gamma-glutamyl-phosphate reducta	95.45
PRK06407	301	ornithine cyclodeaminase; Provisional	95.44
TIGR01745	366	asd_gamma aspartate-semialdehyde dehydrogenase, ga	95.43
PRK00045	423	hemA glutamyl-tRNA reductase; Reviewed	95.43
PRK09496	453	trkA potassium transporter peripheral membrane com	95.41
PRK06598	369	aspartate-semialdehyde dehydrogenase; Reviewed	95.41
cd01080	168	NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of	95.38
PRK07877	722	hypothetical protein; Provisional	95.36
PRK05476	425	S-adenosyl-L-homocysteine hydrolase; Provisional	95.35
PRK07589	346	ornithine cyclodeaminase; Validated	95.35
PRK07791	286	short chain dehydrogenase; Provisional	95.34
PRK07411	390	hypothetical protein; Validated	95.31
PRK08690	261	enoyl-(acyl carrier protein) reductase; Provisiona	95.29
PRK06505	271	enoyl-(acyl carrier protein) reductase; Provisiona	95.26
PRK05671	336	aspartate-semialdehyde dehydrogenase; Reviewed	95.25
PRK06823	315	ornithine cyclodeaminase; Validated	95.24
cd01079	197	NAD_bind_m-THF_DH NAD binding domain of methylene-	95.24
TIGR01327	525	PGDH D-3-phosphoglycerate dehydrogenase. This mode	95.23
PLN02383	344	aspartate semialdehyde dehydrogenase	95.22
cd01492	197	Aos1_SUMO Ubiquitin activating enzyme (E1) subunit	95.2
TIGR01289	314	LPOR light-dependent protochlorophyllide reductase	95.19
PRK13581	526	D-3-phosphoglycerate dehydrogenase; Provisional	95.18
PF02882	160	THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cycl	95.15
PRK09424	509	pntA NAD(P) transhydrogenase subunit alpha; Provis	95.15
PF00106	167	adh_short: short chain dehydrogenase alcohol dehyd	95.14
PRK12859	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	95.14
COG0136	334	Asd Aspartate-semialdehyde dehydrogenase [Amino ac	95.14
KOG0409	327	consensus Predicted dehydrogenase [General functio	95.13
COG0702	275	Predicted nucleoside-diphosphate-sugar epimerases	95.12
smart00822	180	PKS_KR This enzymatic domain is part of bacterial	95.11
TIGR03443	1389	alpha_am_amid L-aminoadipate-semialdehyde dehydrog	95.11
PRK07370	258	enoyl-(acyl carrier protein) reductase; Validated	95.1
TIGR00518	370	alaDH alanine dehydrogenase. The family of known L	95.09
PRK08159	272	enoyl-(acyl carrier protein) reductase; Provisiona	95.08
PRK08594	257	enoyl-(acyl carrier protein) reductase; Provisiona	95.08
PRK13529	563	malate dehydrogenase; Provisional	95.06
PRK05600	370	thiamine biosynthesis protein ThiF; Validated	95.03
COG0686	371	Ald Alanine dehydrogenase [Amino acid transport an	94.99
PRK01438	480	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	94.98
PRK15116	268	sulfur acceptor protein CsdL; Provisional	94.94
PRK08762	376	molybdopterin biosynthesis protein MoeB; Validated	94.92
PRK06199	379	ornithine cyclodeaminase; Validated	94.92
cd01491	286	Ube1_repeat1 Ubiquitin activating enzyme (E1), rep	94.92
PLN03129	581	NADP-dependent malic enzyme; Provisional	94.91
PRK06436	303	glycerate dehydrogenase; Provisional	94.9
PRK12748	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	94.88
COG2344	211	AT-rich DNA-binding protein [General function pred	94.87
PRK05597	355	molybdopterin biosynthesis protein MoeB; Validated	94.86
PRK14192	283	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.85
COG0289	266	DapB Dihydrodipicolinate reductase [Amino acid tra	94.82
PRK11889	436	flhF flagellar biosynthesis regulator FlhF; Provis	94.82
PRK06728	347	aspartate-semialdehyde dehydrogenase; Provisional	94.8
PF13241	103	NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_	94.79
PLN00203	519	glutamyl-tRNA reductase	94.77
COG0002	349	ArgC Acetylglutamate semialdehyde dehydrogenase [A	94.73

>cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases

Probab=100.00  E-value=3.6e-67  Score=498.05  Aligned_cols=309  Identities=68%  Similarity=1.075  Sum_probs=280.8

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcCCCCC
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVPR  122 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~ag~~~  122 (354)
                      |||+||||+|+||+++|+.|+.+++..||+|+|++.++|+++||+|+.....++.+..++|++++++|||+||++||.|+
T Consensus         1 ~KI~IIGaaG~VG~~~a~~l~~~~~~~elvLiDi~~a~g~alDL~~~~~~~~i~~~~~~~~~y~~~~daDivvitaG~~~   80 (310)
T cd01337           1 VKVAVLGAAGGIGQPLSLLLKLNPLVSELALYDIVNTPGVAADLSHINTPAKVTGYLGPEELKKALKGADVVVIPAGVPR   80 (310)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEecCccceeehHhHhCCCcceEEEecCCCchHHhcCCCCEEEEeCCCCC
Confidence            69999999899999999999999999999999998678999999998744456643233466799999999999999999


Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCCchHHHHHHHHHhCCCCCCCEEEeccchHHHHHHHHHHH
Q 018512          123 KPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEV  202 (354)
Q Consensus       123 ~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~~~~~~~~~~p~~kviG~t~ld~~r~~~~la~~  202 (354)
                      ++|++|.|++..|+++++++++.+++++|++|+|++|||+|++++++++++++.+++|++||||+|.||+.|+++++|++
T Consensus        81 k~g~tR~dll~~N~~i~~~i~~~i~~~~p~a~vivvtNPvDv~~~i~t~~~~~~s~~p~~rviG~~~LDs~R~~~~la~~  160 (310)
T cd01337          81 KPGMTRDDLFNINAGIVRDLATAVAKACPKALILIISNPVNSTVPIAAEVLKKAGVYDPKRLFGVTTLDVVRANTFVAEL  160 (310)
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEccCchhhHHHHHHHHHHHhcCCCHHHEEeeechHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999889999999999999


Q ss_pred             hCCCCCCCcceEEeec-CCccccccccccCCCCCCChHHHHHHHHHHhcchhHHHhhhccCCcchhhHHHHHHHHHHHHH
Q 018512          203 LGLDPRDVDVPVVGGH-AGVTILPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACL  281 (354)
Q Consensus       203 l~v~~~~v~~~v~G~h-g~~~~vp~~s~~~v~~~~~~~~~~~i~~~v~~~~~~i~~~~~~kg~~~~s~A~a~~~ii~si~  281 (354)
                      +|+++++|+++||||| |+ ++||+||++.+...++++++++|.+++++++++|++.|.|||+++||+|.++++++++|+
T Consensus       161 l~v~~~~V~~~v~GeHsGd-s~vp~~S~~~~~~~~~~~~~~~i~~~v~~~g~~Ii~~k~gkg~t~~~~a~a~~~iv~aIl  239 (310)
T cd01337         161 LGLDPAKVNVPVIGGHSGV-TILPLLSQCQPPFTFDQEEIEALTHRIQFGGDEVVKAKAGAGSATLSMAYAGARFANSLL  239 (310)
T ss_pred             hCcCHHHEEEEEEecCCCC-ceecccccccccccCCHHHHHHHHHHHHHHHHHHHhCccCCCCcchhHHHHHHHHHHHHH
Confidence            9999999999999999 89 999999999875456666689999999999999999766789999999999999999999


Q ss_pred             hccCCCCcEEEeeeeeccCCCccEEEEeEEEcCCCeEEeccCCCCCHHHHHHHHHHHHHHHHHHHHhhhhh
Q 018512          282 RGLRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSIQKGISFS  352 (354)
Q Consensus       282 ~~~~~~~~v~~~~~~~g~~~~~~~~svPv~ig~~Gv~~i~~~~~L~~~E~~~l~~sa~~i~~~~~~~~~~~  352 (354)
                      +|+++++.++++++++|+-.+++|+|+||++|++|+++++++++|+++|+++|++|++.|++.+++|++|+
T Consensus       240 ~~~~~~~~~~~~s~~~~~g~~~v~~s~P~~ig~~Gv~~i~~l~~L~~~E~~~l~~S~~~i~~~~~~g~~~~  310 (310)
T cd01337         240 RGLKGEKGVIECAYVESDVTEAPFFATPVELGKNGVEKNLGLGKLNDYEKKLLEAALPELKKNIEKGVDFV  310 (310)
T ss_pred             HhcCCCcceEEEEEEeccCCCceEEEEEEEEeCCeEEEEeCCCCCCHHHHHHHHHHHHHHHHHHhhhcccC
Confidence            88655555778887766535789999999999999999998525999999999999999999999999875

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>TIGR01772 MDH_euk_gproteo malate dehydrogenase, NAD-dependent

Probab=100.00  E-value=4.5e-67  Score=498.25  Aligned_cols=311  Identities=59%  Similarity=0.949  Sum_probs=281.3

Q ss_pred             eEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcCCCCCC
Q 018512           44 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVPRK  123 (354)
Q Consensus        44 kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~ag~~~~  123 (354)
                      ||+||||+|+||+++|+.|+.+++..||+|+|++++.|+++||+|......++.+.+.++++++++|||+||+++|.+++
T Consensus         1 KV~IiGaaG~VG~~~a~~l~~~~~~~elvL~Di~~a~g~a~DL~~~~~~~~i~~~~~~~~~~~~~~daDivvitaG~~~~   80 (312)
T TIGR01772         1 KVAVLGAAGGIGQPLSLLLKLQPYVSELSLYDIAGAAGVAADLSHIPTAASVKGFSGEEGLENALKGADVVVIPAGVPRK   80 (312)
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCcEEEEecCCCCcEEEchhhcCCcCceEEEecCCCchHHHcCCCCEEEEeCCCCCC
Confidence            79999999999999999999999889999999988889999999976333444322223457899999999999999999


Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCCchHHHHHHHHHhCCCCCCCEEEeccchHHHHHHHHHHHh
Q 018512          124 PGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEVL  203 (354)
Q Consensus       124 ~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~~~~~~~~~~p~~kviG~t~ld~~r~~~~la~~l  203 (354)
                      +|++|+|++..|+++++++++.|++++|++++|++|||+|++++++++++++.+|||++||||+|.||+.||++++|+++
T Consensus        81 ~g~~R~dll~~N~~I~~~i~~~i~~~~p~~iiivvsNPvDv~~~i~t~~~~~~sg~p~~rViG~g~LDsaR~r~~la~~l  160 (312)
T TIGR01772        81 PGMTRDDLFNVNAGIVKDLVAAVAESCPKAMILVITNPVNSTVPIAAEVLKKKGVYDPNKLFGVTTLDIVRANTFVAELK  160 (312)
T ss_pred             CCccHHHHHHHhHHHHHHHHHHHHHhCCCeEEEEecCchhhHHHHHHHHHHHhcCCChHHEEeeecchHHHHHHHHHHHh
Confidence            99999999999999999999999999999999999999999999889999999999999999998799999999999999


Q ss_pred             CCCCCCCcceEEeecCCccccccccccCCCCCCChHHHHHHHHHHhcchhHHHhhhccCCcchhhHHHHHHHHHHHHHhc
Q 018512          204 GLDPRDVDVPVVGGHAGVTILPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRG  283 (354)
Q Consensus       204 ~v~~~~v~~~v~G~hg~~~~vp~~s~~~v~~~~~~~~~~~i~~~v~~~~~~i~~~~~~kg~~~~s~A~a~~~ii~si~~~  283 (354)
                      |+++++|+++||||||+.+++|+||.++....++++++++|.+++++++++|++.|+|||+++||+|.++++++++|+++
T Consensus       161 ~v~~~~v~~~ViGeHg~~s~vp~~S~~~~~~~~~~~~~~~i~~~v~~~g~~Ii~~k~gkg~t~~~ia~a~~~iv~ail~~  240 (312)
T TIGR01772       161 GKDPMEVNVPVIGGHSGETIIPLISQCPGKVLFTEDQLEALIHRIQNAGTEVVKAKAGAGSATLSMAFAGARFVLSLVRG  240 (312)
T ss_pred             CCCHHHeEEEEEEecCCCccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCccCCCChhHHHHHHHHHHHHHHHHh
Confidence            99999999999999986589999999986444666668999999999999999976678999999999999999999975


Q ss_pred             cCCCCcEEEeeeeeccC-CCccEEEEeEEEcCCCeEEeccCCCCCHHHHHHHHHHHHHHHHHHHHhhhhhcC
Q 018512          284 LRGDAGVVECAFVASQV-TELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSIQKGISFSKK  354 (354)
Q Consensus       284 ~~~~~~v~~~~~~~g~~-~~~~~~svPv~ig~~Gv~~i~~~~~L~~~E~~~l~~sa~~i~~~~~~~~~~~~~  354 (354)
                      ..+++.++|+++++|+| ++++|||+||+||++|+++++++++|+++|+++|++|++.|++.+++|++|++.
T Consensus       241 ~~d~~~v~~~s~~~g~yg~~~v~~s~P~~ig~~Gv~~i~~~~~L~~~E~~~l~~S~~~i~~~~~~g~~~~~~  312 (312)
T TIGR01772       241 LKGEEGVVECAYVESDGVTEATFFATPLLLGKNGVEKRLGIGKLSSFEEKMLNGALPELKKNIKKGEEFVAS  312 (312)
T ss_pred             hCCCccEEEEEEEccCCCcCceEEEEEEEEcCCeeEEEEccCCCCHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence            33334688988889998 789999999999999999999844899999999999999999999999999873

Although malate dehydrogenases have in some cases been mistaken for lactate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of lactate dehydrogenases.

>COG0039 Mdh Malate/lactate dehydrogenases [Energy production and conversion]

Probab=100.00  E-value=1.5e-65  Score=481.99  Aligned_cols=297  Identities=38%  Similarity=0.584  Sum_probs=270.2

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCCC--CeEEEEeCCCcHHhhhCCCcEEEEcC
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTG--AVVRGFLGQPQLENALTGMDLVIIPA  118 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~~--~~v~~~~~~~d~~~al~~aDvVIi~a  118 (354)
                      +||+|||| |+||+++++.|+..++..|++|+|+++  ++|.++||.|+.+.  ...+.. .+.+ +++|+|||+||++|
T Consensus         1 ~KVaviGa-G~VG~s~a~~l~~~~~~~el~LiDi~~~~~~G~a~DL~~~~~~~~~~~~i~-~~~~-y~~~~~aDiVvitA   77 (313)
T COG0039           1 MKVAVIGA-GNVGSSLAFLLLLQGLGSELVLIDINEEKAEGVALDLSHAAAPLGSDVKIT-GDGD-YEDLKGADIVVITA   77 (313)
T ss_pred             CeEEEECC-ChHHHHHHHHHhcccccceEEEEEcccccccchhcchhhcchhccCceEEe-cCCC-hhhhcCCCEEEEeC
Confidence            59999999 999999999998778878999999996  79999999998753  234433 2245 58899999999999


Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCCchHHHHHHHHHhCCCCCCCEEEe-ccchHHHHHH
Q 018512          119 GVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRANT  197 (354)
Q Consensus       119 g~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~~~~~~~~~~p~~kviG~-t~ld~~r~~~  197 (354)
                      |.||+|||+|+|++..|.++++++++++.++|||++++++|||+|++||++    ++.+|+|++||||+ |.||++||++
T Consensus        78 G~prKpGmtR~DLl~~Na~I~~~i~~~i~~~~~d~ivlVvtNPvD~~ty~~----~k~sg~p~~rvig~gt~LDsaR~~~  153 (313)
T COG0039          78 GVPRKPGMTRLDLLEKNAKIVKDIAKAIAKYAPDAIVLVVTNPVDILTYIA----MKFSGFPKNRVIGSGTVLDSARFRT  153 (313)
T ss_pred             CCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhCCCeEEEEecCcHHHHHHHH----HHhcCCCccceecccchHHHHHHHH
Confidence            999999999999999999999999999999999999999999999998765    89999999999999 8999999999


Q ss_pred             HHHHHhCCCCCCCcceEEeecCCccccccccccCCCC----C----CChHHHHHHHHHHhcchhHHHhhhccCCcchhhH
Q 018512          198 FVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPC----S----FTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSM  269 (354)
Q Consensus       198 ~la~~l~v~~~~v~~~v~G~hg~~~~vp~~s~~~v~~----~----~~~~~~~~i~~~v~~~~~~i~~~~~~kg~~~~s~  269 (354)
                      ++|+++|+++++|+++|+|+||+ ++||+||++++..    .    .++++++++.+++++++++|+++| |.| +.||+
T Consensus       154 ~lae~~~v~~~~V~~~ViGeHGd-t~vp~~S~a~v~G~pl~~~~~~~~~~~~~~i~~~v~~~g~eII~~k-G~~-t~~~~  230 (313)
T COG0039         154 FLAEKLGVSPKDVHAYVIGEHGD-TMVPLWSQATVGGKPLEELLKEDTEEDLEELIERVRNAGAEIIEAK-GAG-TYYGP  230 (313)
T ss_pred             HHHHHhCCChhHceeeEeccCCC-ceEEeeeeeeECCEEHHHHhhcccHhHHHHHHHHHHhhHHHHHHcc-Ccc-chhhH
Confidence            99999999999999999999999 9999999999853    1    234567899999999999999976 444 99999


Q ss_pred             HHHHHHHHHHHHhccCCCCcEEEee-eeeccC-CCccEEEEeEEEcCCCeEEeccCCCCCHHHHHHHHHHHHHHHHHHHH
Q 018512          270 AYAAVKFADACLRGLRGDAGVVECA-FVASQV-TELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSIQK  347 (354)
Q Consensus       270 A~a~~~ii~si~~~~~~~~~v~~~~-~~~g~~-~~~~~~svPv~ig~~Gv~~i~~~~~L~~~E~~~l~~sa~~i~~~~~~  347 (354)
                      |.++++++++|++|++   +++|++ +++|+| ++++|+|+|+++|++|+++++++ +|+++|+++|++|++.|++.++.
T Consensus       231 A~a~a~~~~ail~d~~---~vl~~s~~l~G~yg~~dv~~gvP~~lg~~Gv~~iie~-~l~~~E~~~l~~s~~~lk~~i~~  306 (313)
T COG0039         231 AAALARMVEAILRDEK---RVLPVSVYLDGEYGVEDVYFGVPAVLGKNGVEEILEL-LLSDDEQEKLDKSAEELKKNIEL  306 (313)
T ss_pred             HHHHHHHHHHHHcCCC---ceEEEEEeecCccCcCCeEEEeeEEEcCCCcEEEecC-CCCHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999985   489997 789999 89999999999999999999996 99999999999999999999999


Q ss_pred             hhhhhc
Q 018512          348 GISFSK  353 (354)
Q Consensus       348 ~~~~~~  353 (354)
                      +.+++.
T Consensus       307 ~~~~~~  312 (313)
T COG0039         307 VKELVL  312 (313)
T ss_pred             HHHhhc
Confidence            987764

>PLN00106 malate dehydrogenase

Probab=100.00  E-value=1.2e-63  Score=476.58  Aligned_cols=315  Identities=79%  Similarity=1.208  Sum_probs=284.9

Q ss_pred             hhcccCCCCCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCC
Q 018512           32 AKCRAKGGAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGM  111 (354)
Q Consensus        32 ~~~~~~~~~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~a  111 (354)
                      ..||.+++.++.||+||||+|+||+++++.|+.+++..|++|+|+++++++++||.|+.....+..+..++|++++++||
T Consensus         8 ~~~~~~~~~~~~KV~IiGaaG~VG~~~a~~l~~~~~~~el~L~Di~~~~g~a~Dl~~~~~~~~i~~~~~~~d~~~~l~~a   87 (323)
T PLN00106          8 RACRAKGGAPGFKVAVLGAAGGIGQPLSLLMKMNPLVSELHLYDIANTPGVAADVSHINTPAQVRGFLGDDQLGDALKGA   87 (323)
T ss_pred             hccccccCCCCCEEEEECCCCHHHHHHHHHHHhCCCCCEEEEEecCCCCeeEchhhhCCcCceEEEEeCCCCHHHHcCCC
Confidence            45788888888999999999999999999999999989999999988888999999987644555544566788999999


Q ss_pred             cEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCCchHHHHHHHHHhCCCCCCCEEEeccch
Q 018512          112 DLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLD  191 (354)
Q Consensus       112 DvVIi~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~~~~~~~~~~p~~kviG~t~ld  191 (354)
                      |+||++||.++++|++|.|++..|.++++++++++++++|+++|+++|||+|.+++++++++++.+++|++|+||+|.||
T Consensus        88 DiVVitAG~~~~~g~~R~dll~~N~~i~~~i~~~i~~~~p~aivivvSNPvD~~~~i~t~~~~~~s~~p~~~viG~~~LD  167 (323)
T PLN00106         88 DLVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEAVAKHCPNALVNIISNPVNSTVPIAAEVLKKAGVYDPKKLFGVTTLD  167 (323)
T ss_pred             CEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCCCccccHHHHHHHHHHcCCCCcceEEEEecch
Confidence            99999999999999999999999999999999999999999999999999997777777788999999999999998899


Q ss_pred             HHHHHHHHHHHhCCCCCCCcceEEeecCCccccccccccCCCCCCChHHHHHHHHHHhcchhHHHhhhccCCcchhhHHH
Q 018512          192 VVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAY  271 (354)
Q Consensus       192 ~~r~~~~la~~l~v~~~~v~~~v~G~hg~~~~vp~~s~~~v~~~~~~~~~~~i~~~v~~~~~~i~~~~~~kg~~~~s~A~  271 (354)
                      ++||++++|+++|+++.+|+++|+||||+.++||+||++.+...++++++++|.+++++++++|++.|.|||+++||+|.
T Consensus       168 s~Rl~~~lA~~lgv~~~~V~~~ViGeHg~~s~vp~~S~~~~~~~~~~~~~~~i~~~v~~~g~~Ii~~k~~kg~t~~~~a~  247 (323)
T PLN00106        168 VVRANTFVAEKKGLDPADVDVPVVGGHAGITILPLLSQATPKVSFTDEEIEALTKRIQNGGTEVVEAKAGAGSATLSMAY  247 (323)
T ss_pred             HHHHHHHHHHHhCCChhheEEEEEEeCCCccEeeehhcceecccCCHHHHHHHHHHHHHHHHHHHhCccCCCCchHHHHH
Confidence            99999999999999999999999999965489999999976434666678999999999999999975568999999999


Q ss_pred             HHHHHHHHHHhccCCCCcEEEeeeeeccCCCccEEEEeEEEcCCCeEEeccCCCCCHHHHHHHHHHHHHHHHHHH
Q 018512          272 AAVKFADACLRGLRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSIQ  346 (354)
Q Consensus       272 a~~~ii~si~~~~~~~~~v~~~~~~~g~~~~~~~~svPv~ig~~Gv~~i~~~~~L~~~E~~~l~~sa~~i~~~~~  346 (354)
                      ++++++++|++|+++++.++||++++++|.+++|||+||+||++|+++++++++|+++|+++|++|++.|++.++
T Consensus       248 a~~~ii~ail~~~~~~~~v~~~s~~~~~~~~~v~~s~P~~ig~~Gv~~i~~~~~L~~~E~~~l~~S~~~i~~~~~  322 (323)
T PLN00106        248 AAARFADACLRGLNGEADVVECSYVQSEVTELPFFASKVRLGRNGVEEVLGLGPLSEYEQKGLEALKPELKASIE  322 (323)
T ss_pred             HHHHHHHHHHhccCCCceEEEEEEECcccCCceEEEEEEEEcCCeeEEEcCCCCCCHHHHHHHHHHHHHHHHHhh
Confidence            999999999998765656999998777763349999999999999999999559999999999999999998875

>PTZ00325 malate dehydrogenase; Provisional

Probab=100.00  E-value=6.6e-62  Score=464.14  Aligned_cols=313  Identities=61%  Similarity=0.968  Sum_probs=279.1

Q ss_pred             CCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcCC
Q 018512           40 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG  119 (354)
Q Consensus        40 ~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~ag  119 (354)
                      .++.||+||||+|+||+++++.|+..+...+|+|+|++.+.++++||.|......+..+....+++++++|||+||+++|
T Consensus         6 ~~~~KI~IiGaaG~VGs~~a~~l~~~~~~~elvL~Di~~~~g~a~Dl~~~~~~~~v~~~td~~~~~~~l~gaDvVVitaG   85 (321)
T PTZ00325          6 LKMFKVAVLGAAGGIGQPLSLLLKQNPHVSELSLYDIVGAPGVAADLSHIDTPAKVTGYADGELWEKALRGADLVLICAG   85 (321)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEecCCCcccccchhhcCcCceEEEecCCCchHHHhCCCCEEEECCC
Confidence            34569999999899999999999988988899999995588999999997653344433222344689999999999999


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCCchHHHHHHHHHhCCCCCCCEEEeccchHHHHHHHH
Q 018512          120 VPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFV  199 (354)
Q Consensus       120 ~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~~~~~~~~~~p~~kviG~t~ld~~r~~~~l  199 (354)
                      .++++|++|.|++..|++++++++++|++++|+++|+++|||+|++++++.+.+++.+++|++||||++.||++||++++
T Consensus        86 ~~~~~~~tR~dll~~N~~i~~~i~~~i~~~~~~~iviv~SNPvdv~~~~~~~~~~~~sg~p~~~viG~g~LDs~R~r~~l  165 (321)
T PTZ00325         86 VPRKPGMTRDDLFNTNAPIVRDLVAAVASSAPKAIVGIVSNPVNSTVPIAAETLKKAGVYDPRKLFGVTTLDVVRARKFV  165 (321)
T ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCcHHHHHHHHHhhhhhccCCChhheeechhHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999886444568999999999999779999999999


Q ss_pred             HHHhCCCCCCCcceEEeecCCccccccccccCCCCCCChHHHHHHHHHHhcchhHHHhhhccCCcchhhHHHHHHHHHHH
Q 018512          200 AEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADA  279 (354)
Q Consensus       200 a~~l~v~~~~v~~~v~G~hg~~~~vp~~s~~~v~~~~~~~~~~~i~~~v~~~~~~i~~~~~~kg~~~~s~A~a~~~ii~s  279 (354)
                      |+++|++|++|+++||||||+.++||+||.+..  ++++++++++.+++++++++|++.|.|||+|+||+|.++++++++
T Consensus       166 a~~l~v~~~~V~~~VlGeHGd~s~v~~~S~~g~--~l~~~~~~~i~~~v~~~g~~Ii~~k~~kg~t~~g~a~a~~~i~~a  243 (321)
T PTZ00325        166 AEALGMNPYDVNVPVVGGHSGVTIVPLLSQTGL--SLPEEQVEQITHRVQVGGDEVVKAKEGAGSATLSMAYAAAEWSTS  243 (321)
T ss_pred             HHHhCcChhheEEEEEeecCCcccccchhccCC--CCCHHHHHHHHHHHHHHHHHHHhcccCCCCchHHHHHHHHHHHHH
Confidence            999999999999999999998449999999943  566777999999999999999998666799999999999999999


Q ss_pred             HHhccCCCCcEEEeeeeeccC-CCccEEEEeEEEcCCCeEEeccCCCCCHHHHHHHHHHHHHHHHHHHHhhhhhcC
Q 018512          280 CLRGLRGDAGVVECAFVASQV-TELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSIQKGISFSKK  354 (354)
Q Consensus       280 i~~~~~~~~~v~~~~~~~g~~-~~~~~~svPv~ig~~Gv~~i~~~~~L~~~E~~~l~~sa~~i~~~~~~~~~~~~~  354 (354)
                      |++|..+++.++++++++|+| .+++|+|+||++|++|+++++++++|+++|+++|++|++.|++.++++++|.++
T Consensus       244 il~~~~~~~~v~~~~~~~g~yg~~~v~~s~P~~ig~~Gv~~i~~~~~L~~~E~~~l~~S~~~i~~~~~~~~~~~~~  319 (321)
T PTZ00325        244 VLKALRGDKGIVECAFVESDMRPECPFFSSPVELGKEGVERVLPIGPLNAYEEELLEAAVPDLKKNIEKGLEFARK  319 (321)
T ss_pred             HHhhcCCCCCeEEEEEEecCCCCCCeEEEEEEEEcCCeeEEEcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            998744344588888889999 689999999999999999999833999999999999999999999999998764

>cd05290 LDH_3 A subgroup of L-lactate dehydrogenases

Probab=100.00  E-value=2e-62  Score=466.43  Aligned_cols=286  Identities=27%  Similarity=0.392  Sum_probs=259.5

Q ss_pred             eEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCCC---CeEEEEeCCCcHHhhhCCCcEEEEcC
Q 018512           44 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTG---AVVRGFLGQPQLENALTGMDLVIIPA  118 (354)
Q Consensus        44 kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~~---~~v~~~~~~~d~~~al~~aDvVIi~a  118 (354)
                      ||+|||+ |+||+++|+.|+.+++.+||+|+|+++  ++|+++||.|....   ..++..  .+| +++++|||+||++|
T Consensus         1 Ki~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~a~g~a~DL~~~~~~~~~~~~~i~--~~~-y~~~~~aDivvita   76 (307)
T cd05290           1 KLVVIGA-GHVGSAVLNYALALGLFSEIVLIDVNEGVAEGEALDFHHATALTYSTNTKIR--AGD-YDDCADADIIVITA   76 (307)
T ss_pred             CEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHHHHHHHhhhccCCCCCEEEE--ECC-HHHhCCCCEEEECC
Confidence            7999999 999999999999999999999999987  78999999997532   235544  246 58899999999999


Q ss_pred             CCCCCCCCC--HHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCCchHHHHHHHHHhCCCCCCCEEEe-ccchHHHH
Q 018512          119 GVPRKPGMT--RDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRA  195 (354)
Q Consensus       119 g~~~~~g~~--r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~~~~~~~~~~p~~kviG~-t~ld~~r~  195 (354)
                      |.|+++|++  |+|++..|+++++++++++.+++|++++|++|||+|++||++    ++.+|||++||||+ |.||+.||
T Consensus        77 G~~~kpg~tr~R~dll~~N~~I~~~i~~~i~~~~p~~i~ivvsNPvDv~t~~~----~k~sg~p~~rviG~gt~LDs~R~  152 (307)
T cd05290          77 GPSIDPGNTDDRLDLAQTNAKIIREIMGNITKVTKEAVIILITNPLDIAVYIA----ATEFDYPANKVIGTGTMLDTARL  152 (307)
T ss_pred             CCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEecCcHHHHHHHH----HHHhCcChhheecccchHHHHHH
Confidence            999999999  699999999999999999999999999999999999998764    78899999999999 99999999


Q ss_pred             HHHHHHHhCCCCCCCcceEEeecCCccccccccccCCCC-C---------CChHHHHHHHHHHhcchhHHHhhhccCCcc
Q 018512          196 NTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPC-S---------FTQEETEYLTNRIQNGGTEVVEAKAGAGSA  265 (354)
Q Consensus       196 ~~~la~~l~v~~~~v~~~v~G~hg~~~~vp~~s~~~v~~-~---------~~~~~~~~i~~~v~~~~~~i~~~~~~kg~~  265 (354)
                      ++++|+++|+++++|+++||||||+ +++|+||++++++ +         ..+.+++++.+++++++++|++   +||++
T Consensus       153 ~~~la~~l~v~~~~V~~~ViGeHGd-s~vp~wS~~~v~g~~l~~~~~~~~~~~~~~~~i~~~v~~~g~~Ii~---~KG~t  228 (307)
T cd05290         153 RRIVADKYGVDPKNVTGYVLGEHGS-HAFPVWSLVNIAGLPLDELEALFGKEPIDKDELLEEVVQAAYDVFN---RKGWT  228 (307)
T ss_pred             HHHHHHHhCCCcccEEEEEEecCCC-ceEEeeeeeEECCEEHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHH---ccCee
Confidence            9999999999999999999999999 9999999998753 1         1222478999999999999999   57999


Q ss_pred             hhhHHHHHHHHHHHHHhccCCCCcEEEee-eeeccC-CCccEEEEeEEEcCCCeEEeccCCCCCHHHHHHHHHHHHHHHH
Q 018512          266 TLSMAYAAVKFADACLRGLRGDAGVVECA-FVASQV-TELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAG  343 (354)
Q Consensus       266 ~~s~A~a~~~ii~si~~~~~~~~~v~~~~-~~~g~~-~~~~~~svPv~ig~~Gv~~i~~~~~L~~~E~~~l~~sa~~i~~  343 (354)
                      +|++|.++++++++|++|.+   .++|++ +++|+| ++++|+|+||+||++|+++++++ +|+++|+++|++|++.|++
T Consensus       229 ~~~ia~a~~~ii~ail~d~~---~v~~vsv~~~G~yg~~~v~~svP~~ig~~Gv~~i~~l-~L~~~E~~~l~~s~~~i~~  304 (307)
T cd05290         229 NAGIAKSASRLIKAILLDER---SILPVCTLLSGEYGLSDVALSLPTVIGAKGIERVLEI-PLDEWELEKLHKSAKAIRE  304 (307)
T ss_pred             hHHHHHHHHHHHHHHHhCCC---eEEEEEEeeCCccCCCCEEEEEEEEEeCCCceEecCC-CCCHHHHHHHHHHHHHHHH
Confidence            99999999999999998865   488887 679999 78999999999999999999995 9999999999999999997


Q ss_pred             HH
Q 018512          344 SI  345 (354)
Q Consensus       344 ~~  345 (354)
                      .+
T Consensus       305 ~~  306 (307)
T cd05290         305 TI  306 (307)
T ss_pred             Hh
Confidence            65

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of some bacterial LDHs from firmicutes, gammaproteobacteria, and actinobacteria. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenase, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>KOG1495 consensus Lactate dehydrogenase [Energy production and conversion]

Probab=100.00  E-value=3.4e-62  Score=439.52  Aligned_cols=289  Identities=23%  Similarity=0.356  Sum_probs=264.5

Q ss_pred             CCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCCC---CeEEEEeCCCcHHhhhCCCcEE
Q 018512           40 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTG---AVVRGFLGQPQLENALTGMDLV  114 (354)
Q Consensus        40 ~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~~---~~v~~~~~~~d~~~al~~aDvV  114 (354)
                      .+..||+|+|+ |+||.++|..++.+++.+|++|+|.++  ++|++|||+|...+   +.+..   ..|+ .+.+|+++|
T Consensus        18 ~~~~KItVVG~-G~VGmAca~siL~k~Ladel~lvDv~~dklkGE~MDLqH~s~f~~~~~V~~---~~Dy-~~sa~S~lv   92 (332)
T KOG1495|consen   18 FKHNKITVVGV-GQVGMACAISILLKGLADELVLVDVNEDKLKGEMMDLQHGSAFLSTPNVVA---SKDY-SVSANSKLV   92 (332)
T ss_pred             ccCceEEEEcc-chHHHHHHHHHHHhhhhhceEEEecCcchhhhhhhhhccccccccCCceEe---cCcc-cccCCCcEE
Confidence            33569999999 999999999999999999999999988  79999999998642   33332   3575 779999999


Q ss_pred             EEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCCchHHHHHHHHHhCCCCCCCEEEe-ccchHH
Q 018512          115 IIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVV  193 (354)
Q Consensus       115 Ii~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~~~~~~~~~~p~~kviG~-t~ld~~  193 (354)
                      |+|||..+++|++|++++++|+.+++.+.+++.+|.|+++++++|||+|++||++    ||.+|||.+||||. |+||+.
T Consensus        93 IiTAGarq~~gesRL~lvQrNV~ifK~iip~lv~ySpd~~llvvSNPVDilTYv~----wKLSgfP~nRViGsGcnLDsa  168 (332)
T KOG1495|consen   93 IITAGARQSEGESRLDLVQRNVDIFKAIIPALVKYSPDCILLVVSNPVDILTYVT----WKLSGFPKNRVIGSGCNLDSA  168 (332)
T ss_pred             EEecCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEecCchHHHHHHH----HHHcCCcccceeccCcCccHH
Confidence            9999999999999999999999999999999999999999999999999998764    99999999999999 999999


Q ss_pred             HHHHHHHHHhCCCCCCCcceEEeecCCccccccccccCCCC------------CCChHHHHHHHHHHhcchhHHHhhhcc
Q 018512          194 RANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPC------------SFTQEETEYLTNRIQNGGTEVVEAKAG  261 (354)
Q Consensus       194 r~~~~la~~l~v~~~~v~~~v~G~hg~~~~vp~~s~~~v~~------------~~~~~~~~~i~~~v~~~~~~i~~~~~~  261 (354)
                      |||++++++||++|+++++|++||||| +.||.||...+.+            ..+++.|+++.++|.+.+|+|+++   
T Consensus       169 RFryLi~~~Lg~~pss~hgwIiGEHGd-SsV~vWSgvniAGv~l~~l~~~~~t~~d~e~w~eihK~v~~sayevikl---  244 (332)
T KOG1495|consen  169 RFRYLIGNRLGVHPSSCHGWIIGEHGD-SSVPVWSGVNIAGVSLKDLNPDLGTDYDPENWKEIHKQVVDSAYEVIKL---  244 (332)
T ss_pred             HHHHHHHHHhCCCcccceEEEeeccCC-ccceecccccccceEHhHhChhhcCCCCHHHHHHHHHHHHHHHHHHHHh---
Confidence            999999999999999999999999999 9999999998631            356678999999999999999995   


Q ss_pred             CCcchhhHHHHHHHHHHHHHhccCCCCcEEEee-eeeccC--CCccEEEEeEEEcCCCeEEeccCCCCCHHHHHHHHHHH
Q 018512          262 AGSATLSMAYAAVKFADACLRGLRGDAGVVECA-FVASQV--TELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAK  338 (354)
Q Consensus       262 kg~~~~s~A~a~~~ii~si~~~~~~~~~v~~~~-~~~g~~--~~~~~~svPv~ig~~Gv~~i~~~~~L~~~E~~~l~~sa  338 (354)
                      ||+|+|++|.++++++++|+.|++.   +.|++ .++|.|  .+|+|||+||++|++|+..++.. +|+++|.++|++||
T Consensus       245 KGyTswaIglsva~l~~ail~n~~~---i~~Vst~~kg~~gI~~dVflSlPc~l~~~Gi~~vv~~-~Lt~~E~akL~kSa  320 (332)
T KOG1495|consen  245 KGYTSWAIGLSVADLAQAILRNLRR---IHPVSTMVKGLYGIDDDVFLSLPCLLGANGITHVVKQ-KLTDEEVAKLKKSA  320 (332)
T ss_pred             cCchHHHHHHHHHHHHHHHHhCcCc---eeeeeeccccccCCCCceEEecceeecCCchhhhhcc-cCCHHHHHHHHHHH
Confidence            6999999999999999999999874   88888 579998  67999999999999999999996 99999999999999


Q ss_pred             HHHHHHH
Q 018512          339 KELAGSI  345 (354)
Q Consensus       339 ~~i~~~~  345 (354)
                      +.|.+..
T Consensus       321 ~tl~~~q  327 (332)
T KOG1495|consen  321 KTLLEAQ  327 (332)
T ss_pred             HHHHHHH
Confidence            9998654

>PRK05086 malate dehydrogenase; Provisional

Probab=100.00  E-value=2.9e-61  Score=460.10  Aligned_cols=310  Identities=56%  Similarity=0.880  Sum_probs=277.0

Q ss_pred             CeEEEEcCCCchHHHHHHHHHh-CCCCcEEEEEecCC-chhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcCCC
Q 018512           43 FKVAILGAAGGIGQPLAMLMKI-NPLVSVLHLYDVVN-TPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGV  120 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~-~~~~~ei~L~D~~~-~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~ag~  120 (354)
                      |||+||||+|.+|+++++.|.. .+...+++|+|+++ ..++++|+.|......+..+ ..++++++++|+|+||+++|.
T Consensus         1 ~KI~IIGAsG~VG~aia~~l~~~~~~~~el~L~d~~~~~~g~alDl~~~~~~~~i~~~-~~~d~~~~l~~~DiVIitaG~   79 (312)
T PRK05086          1 MKVAVLGAAGGIGQALALLLKTQLPAGSELSLYDIAPVTPGVAVDLSHIPTAVKIKGF-SGEDPTPALEGADVVLISAGV   79 (312)
T ss_pred             CEEEEECCCCHHHHHHHHHHHcCCCCccEEEEEecCCCCcceehhhhcCCCCceEEEe-CCCCHHHHcCCCCEEEEcCCC
Confidence            7999999999999999998865 46677999999977 56778999885322234431 235767899999999999999


Q ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCCchHHHHHHHHHhCCCCCCCEEEeccchHHHHHHHHH
Q 018512          121 PRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVA  200 (354)
Q Consensus       121 ~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~~~~~~~~~~p~~kviG~t~ld~~r~~~~la  200 (354)
                      ++++|++|.|++..|+++++++++.|++++|+++|+++|||+|++|+++++++++.+|+|++||||+|.||+.|+++++|
T Consensus        80 ~~~~~~~R~dll~~N~~i~~~ii~~i~~~~~~~ivivvsNP~D~~t~~~~~~~~~~sg~p~~rvig~~~Lds~R~~~~ia  159 (312)
T PRK05086         80 ARKPGMDRSDLFNVNAGIVKNLVEKVAKTCPKACIGIITNPVNTTVAIAAEVLKKAGVYDKNKLFGVTTLDVIRSETFVA  159 (312)
T ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEccCchHHHHHHHHHHHHHhcCCCHHHEEeeecHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999998888899999999999998899999999999


Q ss_pred             HHhCCCCCCCcceEEeecCCccccccccccCCCCCCChHHHHHHHHHHhcchhHHHhhhccCCcchhhHHHHHHHHHHHH
Q 018512          201 EVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADAC  280 (354)
Q Consensus       201 ~~l~v~~~~v~~~v~G~hg~~~~vp~~s~~~v~~~~~~~~~~~i~~~v~~~~~~i~~~~~~kg~~~~s~A~a~~~ii~si  280 (354)
                      +++|+++++|+++||||||+.++||+||++ -+.++++++++++.+++++++++|++.|.|+|+++||+|.++++++++|
T Consensus       160 ~~l~~~~~~v~~~v~GeHg~~s~~p~~S~~-~g~~l~~~~~~~i~~~v~~~g~~ii~~k~~~g~t~~~~a~a~~~~v~ai  238 (312)
T PRK05086        160 ELKGKQPGEVEVPVIGGHSGVTILPLLSQV-PGVSFTEQEVADLTKRIQNAGTEVVEAKAGGGSATLSMGQAAARFGLSL  238 (312)
T ss_pred             HHhCCChhheEEEEEEecCCCceecccccc-CCccCCHHHHHHHHHHHHHHHHHHHhcccCCCCchhhHHHHHHHHHHHH
Confidence            999999999999999999665899999999 3336777779999999999999999976677999999999999999999


Q ss_pred             HhccCCCCcEEEeeeeeccCCCccEEEEeEEEcCCCeEEeccCCCCCHHHHHHHHHHHHHHHHHHHHhhhhhcC
Q 018512          281 LRGLRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSIQKGISFSKK  354 (354)
Q Consensus       281 ~~~~~~~~~v~~~~~~~g~~~~~~~~svPv~ig~~Gv~~i~~~~~L~~~E~~~l~~sa~~i~~~~~~~~~~~~~  354 (354)
                      ++++++++.++|+++++|+-.+++|||+||+||++|+++++++++|+++|+++|++|++.|++.+++|++|+++
T Consensus       239 ~~~~~~~~~v~~~~~~~~~g~~~v~~s~P~~ig~~Gv~~i~~~~~L~~~E~~~l~~s~~~i~~~~~~g~~~~~~  312 (312)
T PRK05086        239 VRALQGEQGVVECAYVEGDGKYARFFAQPVLLGKNGVEERLPIGTLSAFEQNALEGMLDTLKKDIALGEEFVNK  312 (312)
T ss_pred             HhcCCCCCcEEEEEEEeccCCcceEEEEEEEEcCCeeEEEcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhcC
Confidence            98865555699988777653468999999999999999999955999999999999999999999999999975

>PLN02602 lactate dehydrogenase

Probab=100.00  E-value=1.4e-61  Score=467.01  Aligned_cols=311  Identities=23%  Similarity=0.339  Sum_probs=272.4

Q ss_pred             ccchhhhhhhhccc-CCCCCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCC-CCeEEEE
Q 018512           23 LQENSCLRQAKCRA-KGGAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDT-GAVVRGF   98 (354)
Q Consensus        23 ~~~~~~~~~~~~~~-~~~~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~-~~~v~~~   98 (354)
                      +++..++++...+. -...+.+||+|||+ |+||+++++.|+..++..||+|+|+++  ++|+++||+|+.. ....+..
T Consensus        17 ~~~~~~~~~~~~~~~m~~~~~~KI~IIGa-G~VG~~~a~~l~~~~l~~el~LiDi~~~~~~g~a~DL~~~~~~~~~~~i~   95 (350)
T PLN02602         17 LSQAFFKPIHNSSPPSPTRRHTKVSVVGV-GNVGMAIAQTILTQDLADELALVDVNPDKLRGEMLDLQHAAAFLPRTKIL   95 (350)
T ss_pred             hhhhhhhcccccccccccCCCCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCCchhhHHHHHHHhhhhcCCCCEEE
Confidence            57777776665554 21122269999998 999999999999999999999999987  7899999999863 2223332


Q ss_pred             eCCCcHHhhhCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCCchHHHHHHHHHhCC
Q 018512           99 LGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGT  178 (354)
Q Consensus        99 ~~~~d~~~al~~aDvVIi~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~~~~~~~~~  178 (354)
                       .++|+ ++++|||+||++||.++++|++|.|++.+|++++++++++|+++||++|+|++|||+|++|+++    ++.+|
T Consensus        96 -~~~dy-~~~~daDiVVitAG~~~k~g~tR~dll~~N~~I~~~i~~~I~~~~p~~ivivvtNPvdv~t~~~----~k~sg  169 (350)
T PLN02602         96 -ASTDY-AVTAGSDLCIVTAGARQIPGESRLNLLQRNVALFRKIIPELAKYSPDTILLIVSNPVDVLTYVA----WKLSG  169 (350)
T ss_pred             -eCCCH-HHhCCCCEEEECCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCchHHHHHHH----HHHhC
Confidence             23465 6699999999999999999999999999999999999999999999999999999999998764    78889


Q ss_pred             CCCCCEEEe-ccchHHHHHHHHHHHhCCCCCCCcceEEeecCCccccccccccCCCC------------CCChHHHHHHH
Q 018512          179 YDPKKLLGV-TMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPC------------SFTQEETEYLT  245 (354)
Q Consensus       179 ~p~~kviG~-t~ld~~r~~~~la~~l~v~~~~v~~~v~G~hg~~~~vp~~s~~~v~~------------~~~~~~~~~i~  245 (354)
                      ||++||||+ |.||+.|+++++|+++|+++++|+++||||||+ +++|+||.+++.+            .+++++++++.
T Consensus       170 ~p~~rviG~gt~LDs~R~r~~lA~~l~v~~~~V~~~ViGeHGd-s~vp~wS~~~i~G~pl~~~~~~~~~~~~~~~~~~i~  248 (350)
T PLN02602        170 FPANRVIGSGTNLDSSRFRFLIADHLDVNAQDVQAYIVGEHGD-SSVALWSSVSVGGVPVLSFLEKQQIAYEKETLEEIH  248 (350)
T ss_pred             CCHHHEEeecchHHHHHHHHHHHHHhCCCccceeeeEEecCCC-ceEeeeeeeeECCEEHHHHhhccCCccCHHHHHHHH
Confidence            999999999 699999999999999999999999999999999 9999999998732            13344578999


Q ss_pred             HHHhcchhHHHhhhccCCcchhhHHHHHHHHHHHHHhccCCCCcEEEee-eeeccC-C--CccEEEEeEEEcCCCeEEec
Q 018512          246 NRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECA-FVASQV-T--ELPFFASKVRLGRQGAEEIF  321 (354)
Q Consensus       246 ~~v~~~~~~i~~~~~~kg~~~~s~A~a~~~ii~si~~~~~~~~~v~~~~-~~~g~~-~--~~~~~svPv~ig~~Gv~~i~  321 (354)
                      +++++++++|++   +||+|+|++|.++++++++|++|.+   .++|++ +++|+| .  +++|+|+||+||++|+++++
T Consensus       249 ~~v~~~g~eIi~---~KG~t~~gia~a~a~ii~ail~d~~---~v~~vsv~~~g~Yg~~~~~v~~s~P~~ig~~Gi~~i~  322 (350)
T PLN02602        249 RAVVDSAYEVIK---LKGYTSWAIGYSVASLVRSLLRDQR---RIHPVSVLAKGFHGIDEGDVFLSLPAQLGRNGVLGVV  322 (350)
T ss_pred             HHHHHHHHHHHh---cCCccHHHHHHHHHHHHHHHHhcCC---CeEEEEEecccccCCCCCCcEEEEEEEEeCCeeEEEe
Confidence            999999999999   5799999999999999999999986   489998 579998 3  79999999999999999999


Q ss_pred             cCCCCCHHHHHHHHHHHHHHHHHHHHh
Q 018512          322 QLGPLNEYERIGLEKAKKELAGSIQKG  348 (354)
Q Consensus       322 ~~~~L~~~E~~~l~~sa~~i~~~~~~~  348 (354)
                      ++ +|+++|+++|++|++.|++.++..
T Consensus       323 ~l-~L~~~E~~~l~~sa~~l~~~~~~~  348 (350)
T PLN02602        323 NV-HLTDEEAERLRKSAKTLWEVQSQL  348 (350)
T ss_pred             cC-CCCHHHHHHHHHHHHHHHHHHHHh
Confidence            95 999999999999999999887754

>TIGR01759 MalateDH-SF1 malate dehydrogenase

Probab=100.00  E-value=1.1e-61  Score=463.73  Aligned_cols=296  Identities=27%  Similarity=0.377  Sum_probs=262.4

Q ss_pred             CCCeEEEEcCCCchHHHHHHHHHhCCCCc-----EEEEEecCC----chhHHHHHhcCCC-C-CeEEEEeCCCcHHhhhC
Q 018512           41 AGFKVAILGAAGGIGQPLAMLMKINPLVS-----VLHLYDVVN----TPGVTADISHMDT-G-AVVRGFLGQPQLENALT  109 (354)
Q Consensus        41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~-----ei~L~D~~~----~~g~~~dl~~~~~-~-~~v~~~~~~~d~~~al~  109 (354)
                      +|.||+||||+|+||+++++.|+..++++     ||+|+|+++    ++|+++||+|+.. . ..++..  +++ +++++
T Consensus         2 ~p~KV~IIGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~i~--~~~-~~~~~   78 (323)
T TIGR01759         2 KPVRVAVTGAAGQIGYSLLFRIASGELFGKDQPVVLHLLDIPPAMKALEGVAMELEDCAFPLLAGVVAT--TDP-EEAFK   78 (323)
T ss_pred             CCeEEEEECCCcHHHHHHHHHHHhCCcccCCCccEEEEEecCCcccccchHHHHHhhccccccCCcEEe--cCh-HHHhC
Confidence            57899999988999999999999999988     999999954    6899999999863 1 223322  334 68999


Q ss_pred             CCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCC-CeEEEEecCCCCCchHHHHHHHHHhC-CCCCCCEEEe
Q 018512          110 GMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCP-NATVNLISNPVNSTVPIAAEVFKKAG-TYDPKKLLGV  187 (354)
Q Consensus       110 ~aDvVIi~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p-~a~viv~tNPv~~~~~~~~~~~~~~~-~~p~~kviG~  187 (354)
                      |||+||++||.++++|++|.|++..|++++++++++|.+++| ++++|++|||+|++||++    ++.+ |||++||||+
T Consensus        79 daDvVVitAG~~~k~g~tR~dll~~Na~i~~~i~~~i~~~~~~~~iiivvsNPvDv~t~v~----~k~s~g~p~~rViG~  154 (323)
T TIGR01759        79 DVDAALLVGAFPRKPGMERADLLSKNGKIFKEQGKALNKVAKKDVKVLVVGNPANTNALIA----SKNAPDIPPKNFSAM  154 (323)
T ss_pred             CCCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEeCCcHHHHHHHH----HHHcCCCCHHHEEEe
Confidence            999999999999999999999999999999999999999998 999999999999998765    7888 9999999999


Q ss_pred             ccchHHHHHHHHHHHhCCCCCCCc-ceEEeecCCccccccccccCCCC----C-CChHH--HHHHHHHHhcchhHHHhhh
Q 018512          188 TMLDVVRANTFVAEVLGLDPRDVD-VPVVGGHAGVTILPLLSQVKPPC----S-FTQEE--TEYLTNRIQNGGTEVVEAK  259 (354)
Q Consensus       188 t~ld~~r~~~~la~~l~v~~~~v~-~~v~G~hg~~~~vp~~s~~~v~~----~-~~~~~--~~~i~~~v~~~~~~i~~~~  259 (354)
                      |.||+.||++++|+++|++|++|+ .+||||||+ +++|+||++++.+    . ++++.  +++|.+++++++++|++  
T Consensus       155 t~LDs~R~r~~la~~l~v~~~~V~~~~V~GeHG~-s~v~~~S~~~v~g~pl~~~~~~~~~~~~~i~~~v~~~g~~Ii~--  231 (323)
T TIGR01759       155 TRLDHNRAKYQLAAKAGVPVSDVKNVIIWGNHSN-TQVPDFTHATVDGRPVKEVIKDDKWLEGEFIPTVQQRGAAVIE--  231 (323)
T ss_pred             eHHHHHHHHHHHHHHhCcChHHeEEeEEEecCCC-ceeeccccCEECCccHHHHhcchhhHHHHHHHHHHhhHHHHHh--
Confidence            999999999999999999999995 679999999 9999999998753    1 33333  67899999999999999  


Q ss_pred             ccCCcchh-hHHHHHHHHHHHHHhccCCCCcEEEee-eeec-cC--CCccEEEEeEEEcCCCeEEeccCCCCCHHHHHHH
Q 018512          260 AGAGSATL-SMAYAAVKFADACLRGLRGDAGVVECA-FVAS-QV--TELPFFASKVRLGRQGAEEIFQLGPLNEYERIGL  334 (354)
Q Consensus       260 ~~kg~~~~-s~A~a~~~ii~si~~~~~~~~~v~~~~-~~~g-~~--~~~~~~svPv~ig~~Gv~~i~~~~~L~~~E~~~l  334 (354)
                       +||+++| ++|.++++++++|++|++.. .++|++ +++| +|  |+++|||+||++|++|++++++.++|+++|+++|
T Consensus       232 -~kG~t~~~~~a~a~~~iv~ail~~~~~~-~v~~~s~~~~g~~Yg~~~~v~~s~P~~lg~~Gv~~iv~~l~L~~~E~~~l  309 (323)
T TIGR01759       232 -ARGASSAASAANAAIDHVRDWVTGTPEG-DWVSMGVYSDGNPYGIPEGIIFSFPVTCKGDGEWEIVEGLPLDDFVRGKL  309 (323)
T ss_pred             -ccCCcchHHHHHHHHHHHHHHHcCCCCC-cEEEEEEEeCCcccCCCCCeEEEEEEEEcCCeeEEEcCCCCCCHHHHHHH
Confidence             5689999 57799999999999997322 499998 7899 88  4899999999999999999998339999999999


Q ss_pred             HHHHHHHHHHHHHh
Q 018512          335 EKAKKELAGSIQKG  348 (354)
Q Consensus       335 ~~sa~~i~~~~~~~  348 (354)
                      ++|++.|+++++++
T Consensus       310 ~~sa~~lk~~~~~~  323 (323)
T TIGR01759       310 DATEDELLEEKEEA  323 (323)
T ss_pred             HHHHHHHHHHHhcC
Confidence            99999999998764

This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms.

>cd05293 LDH_1 A subgroup of L-lactate dehydrogenases

Probab=100.00  E-value=2e-61  Score=460.79  Aligned_cols=290  Identities=24%  Similarity=0.337  Sum_probs=261.0

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCCCC-eEEEEeCCCcHHhhhCCCcEEEEcC
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGA-VVRGFLGQPQLENALTGMDLVIIPA  118 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~~~-~v~~~~~~~d~~~al~~aDvVIi~a  118 (354)
                      .+||+|||| |+||+++++.|+..++..||+|+|+++  +.|+++||+|+.... .... ..++|+ ++++|||+||+++
T Consensus         3 ~~Ki~IiGa-G~VG~~~a~~l~~~~~~~el~LiD~~~~~~~g~a~Dl~~~~~~~~~~~v-~~~~dy-~~~~~adivvita   79 (312)
T cd05293           3 RNKVTVVGV-GQVGMACAISILAKGLADELVLVDVVEDKLKGEAMDLQHGSAFLKNPKI-EADKDY-SVTANSKVVIVTA   79 (312)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHHHHHhhccCCCCEE-EECCCH-HHhCCCCEEEECC
Confidence            469999998 999999999999999999999999987  789999999986322 1222 224575 5699999999999


Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCCchHHHHHHHHHhCCCCCCCEEEe-ccchHHHHHH
Q 018512          119 GVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRANT  197 (354)
Q Consensus       119 g~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~~~~~~~~~~p~~kviG~-t~ld~~r~~~  197 (354)
                      |.++++|++|.|++.+|+++++++++.|++++|++|+|++|||+|+++++    +++++|+|++||||+ |.||+.|+++
T Consensus        80 G~~~k~g~~R~dll~~N~~i~~~~~~~i~~~~p~~~vivvsNP~d~~t~~----~~k~sg~p~~~viG~gt~Ld~~R~~~  155 (312)
T cd05293          80 GARQNEGESRLDLVQRNVDIFKGIIPKLVKYSPNAILLVVSNPVDIMTYV----AWKLSGLPKHRVIGSGCNLDSARFRY  155 (312)
T ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEccChHHHHHHH----HHHHhCCCHHHEEecCchHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999765    478899999999999 9999999999


Q ss_pred             HHHHHhCCCCCCCcceEEeecCCccccccccccCCCC------------CCChHHHHHHHHHHhcchhHHHhhhccCCcc
Q 018512          198 FVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPC------------SFTQEETEYLTNRIQNGGTEVVEAKAGAGSA  265 (354)
Q Consensus       198 ~la~~l~v~~~~v~~~v~G~hg~~~~vp~~s~~~v~~------------~~~~~~~~~i~~~v~~~~~~i~~~~~~kg~~  265 (354)
                      ++|+++|+++++|+++||||||+ +++|+||++++.+            ..++++++++.+++++++++|++   +||++
T Consensus       156 ~la~~l~v~~~~v~~~v~GeHG~-s~vp~~S~~~i~g~~l~~~~~~~~~~~~~~~~~~i~~~v~~~g~~Ii~---~kg~t  231 (312)
T cd05293         156 LIAERLGVAPSSVHGWIIGEHGD-SSVPVWSGVNVAGVRLQDLNPDIGTDKDPEKWKEVHKQVVDSAYEVIK---LKGYT  231 (312)
T ss_pred             HHHHHhCCChhhEEEEEeecCCC-CccccceeceECCEEHHHHhhhccccccHHHHHHHHHHHHHHHHHHHH---hcCCc
Confidence            99999999999999999999999 9999999998753            11234588999999999999999   57899


Q ss_pred             hhhHHHHHHHHHHHHHhccCCCCcEEEee-eeeccC--CCccEEEEeEEEcCCCeEEeccCCCCCHHHHHHHHHHHHHHH
Q 018512          266 TLSMAYAAVKFADACLRGLRGDAGVVECA-FVASQV--TELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELA  342 (354)
Q Consensus       266 ~~s~A~a~~~ii~si~~~~~~~~~v~~~~-~~~g~~--~~~~~~svPv~ig~~Gv~~i~~~~~L~~~E~~~l~~sa~~i~  342 (354)
                      +|++|.++++++++|++|.+   .++|++ +++|.|  +++++||+||+||++|+++++++ +|+++|+++|++|++.|+
T Consensus       232 ~~~~a~a~~~ii~ail~d~~---~~~~vsv~~~g~yg~~~d~~~svP~~ig~~Gi~~i~~l-~L~~~E~~~l~~s~~~i~  307 (312)
T cd05293         232 SWAIGLSVADLVDAILRNTG---RVHSVSTLVKGLHGIEDEVFLSLPCILGENGITHVIKQ-PLTEEEQEKLQKSADTLW  307 (312)
T ss_pred             hHHHHHHHHHHHHHHHcCCC---eEEEEEEEeCCccCCCCCeEEEEeEEEeCCceEEEecC-CCCHHHHHHHHHHHHHHH
Confidence            99999999999999999875   488887 678988  58999999999999999999995 999999999999999999


Q ss_pred             HHHH
Q 018512          343 GSIQ  346 (354)
Q Consensus       343 ~~~~  346 (354)
                      +.++
T Consensus       308 ~~~~  311 (312)
T cd05293         308 EVQK  311 (312)
T ss_pred             HHhh
Confidence            8764

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK00066 ldh L-lactate dehydrogenase; Reviewed

Probab=100.00  E-value=6.4e-60  Score=451.45  Aligned_cols=292  Identities=24%  Similarity=0.391  Sum_probs=264.4

Q ss_pred             CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCCC-CeEEEEeCCCcHHhhhCCCcEEEEc
Q 018512           41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTG-AVVRGFLGQPQLENALTGMDLVIIP  117 (354)
Q Consensus        41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~~-~~v~~~~~~~d~~~al~~aDvVIi~  117 (354)
                      .++||+|||| |.||+++++.|+..++.+||+|+|+++  ++|+++||.|+... ..+...  +++ +++++|||+||++
T Consensus         5 ~~~ki~iiGa-G~vG~~~a~~l~~~~~~~el~L~D~~~~~~~g~~~Dl~~~~~~~~~~~i~--~~~-~~~~~~adivIit   80 (315)
T PRK00066          5 QHNKVVLVGD-GAVGSSYAYALVNQGIADELVIIDINKEKAEGDAMDLSHAVPFTSPTKIY--AGD-YSDCKDADLVVIT   80 (315)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCCchhHHHHHHHHhhccccCCeEEE--eCC-HHHhCCCCEEEEe
Confidence            4469999999 999999999999999999999999987  68999999998632 234443  345 4789999999999


Q ss_pred             CCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCCchHHHHHHHHHhCCCCCCCEEEe-ccchHHHHH
Q 018512          118 AGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRAN  196 (354)
Q Consensus       118 ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~~~~~~~~~~p~~kviG~-t~ld~~r~~  196 (354)
                      ||.|+++|++|.|++..|+++++++++.+++++|++|+|++|||+|++++++    ++.+|+|++||||+ |.||+.|++
T Consensus        81 ag~~~k~g~~R~dll~~N~~i~~~i~~~i~~~~~~~~vivvsNP~d~~~~~~----~k~sg~p~~~viG~gt~LDs~R~~  156 (315)
T PRK00066         81 AGAPQKPGETRLDLVEKNLKIFKSIVGEVMASGFDGIFLVASNPVDILTYAT----WKLSGFPKERVIGSGTSLDSARFR  156 (315)
T ss_pred             cCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEccCcHHHHHHHH----HHHhCCCHHHEeecCchHHHHHHH
Confidence            9999999999999999999999999999999999999999999999998754    67789999999999 799999999


Q ss_pred             HHHHHHhCCCCCCCcceEEeecCCccccccccccCCCC-----------CCChHHHHHHHHHHhcchhHHHhhhccCCcc
Q 018512          197 TFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPC-----------SFTQEETEYLTNRIQNGGTEVVEAKAGAGSA  265 (354)
Q Consensus       197 ~~la~~l~v~~~~v~~~v~G~hg~~~~vp~~s~~~v~~-----------~~~~~~~~~i~~~v~~~~~~i~~~~~~kg~~  265 (354)
                      +++|+++|+++++|+++||||||+ +++|+||++++++           .+++++++++.++++++++++++   +||++
T Consensus       157 ~~la~~l~v~~~~V~~~viGeHG~-s~v~~~S~~~v~g~~l~~~~~~~~~~~~~~~~~i~~~v~~~g~~ii~---~kg~t  232 (315)
T PRK00066        157 YMLSEKLDVDPRSVHAYIIGEHGD-TEFPVWSHANVAGVPLEEYLEENEQYDEEDLDEIFENVRDAAYEIIE---KKGAT  232 (315)
T ss_pred             HHHHHHhCCCcccEEEEEEecCCC-cceecceeceECCEEHHHHhhhccCcCHHHHHHHHHHHHHHHHHHHh---cCCee
Confidence            999999999999999999999999 9999999998743           13446688999999999999999   56899


Q ss_pred             hhhHHHHHHHHHHHHHhccCCCCcEEEee-eeeccC-CCccEEEEeEEEcCCCeEEeccCCCCCHHHHHHHHHHHHHHHH
Q 018512          266 TLSMAYAAVKFADACLRGLRGDAGVVECA-FVASQV-TELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAG  343 (354)
Q Consensus       266 ~~s~A~a~~~ii~si~~~~~~~~~v~~~~-~~~g~~-~~~~~~svPv~ig~~Gv~~i~~~~~L~~~E~~~l~~sa~~i~~  343 (354)
                      +|++|.++++++++|+++.+   .++|++ +++|+| ++++|||+||++|++|+++++++ +|+++|+++|++|+++|++
T Consensus       233 ~~~~a~~~~~i~~ail~~~~---~v~~~sv~~~g~yg~~~v~~S~Pv~ig~~Gv~~i~~l-~L~~~E~~~L~~s~~~l~~  308 (315)
T PRK00066        233 YYGIAMALARITKAILNNEN---AVLPVSAYLEGQYGEEDVYIGVPAVVNRNGIREIVEL-PLNDDEKQKFAHSADVLKE  308 (315)
T ss_pred             hHHHHHHHHHHHHHHHcCCC---eEEEEEEEeccccCCCCEEEEeEEEEeCCcEEEEcCC-CCCHHHHHHHHHHHHHHHH
Confidence            99999999999999999865   488998 679999 78999999999999999999995 9999999999999999999


Q ss_pred             HHHHh
Q 018512          344 SIQKG  348 (354)
Q Consensus       344 ~~~~~  348 (354)
                      .++..
T Consensus       309 ~~~~~  313 (315)
T PRK00066        309 IMDEA  313 (315)
T ss_pred             HHHHh
Confidence            98764

>TIGR01771 L-LDH-NAD L-lactate dehydrogenase

Probab=100.00  E-value=2.5e-60  Score=450.96  Aligned_cols=281  Identities=24%  Similarity=0.419  Sum_probs=254.0

Q ss_pred             EEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCCC--CeEEEEeCCCcHHhhhCCCcEEEEcCCCCC
Q 018512           47 ILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTG--AVVRGFLGQPQLENALTGMDLVIIPAGVPR  122 (354)
Q Consensus        47 IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~~--~~v~~~~~~~d~~~al~~aDvVIi~ag~~~  122 (354)
                      |||+ |+||+++++.|+..++.+||+|+|+++  ++|+++||+|+...  ..++..  .++ +++++|||+||++||.|+
T Consensus         1 iIGa-G~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~i~--~~~-~~~~~daDivVitag~~r   76 (299)
T TIGR01771         1 IIGA-GNVGSSTAFALLNQGIADEIVLIDINKDKAEGEAMDLQHAASFLPTPKKIR--SGD-YSDCKDADLVVITAGAPQ   76 (299)
T ss_pred             CCCc-CHHHHHHHHHHHhcCCCCEEEEEeCCCChhhHHHHHHHHhhcccCCCeEEe--cCC-HHHHCCCCEEEECCCCCC
Confidence            6898 999999999999999999999999987  79999999998642  223432  345 588999999999999999


Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCCchHHHHHHHHHhCCCCCCCEEEe-ccchHHHHHHHHHH
Q 018512          123 KPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRANTFVAE  201 (354)
Q Consensus       123 ~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~~~~~~~~~~p~~kviG~-t~ld~~r~~~~la~  201 (354)
                      ++||+|.|++..|+++++++++++++++|++++|++|||+|++|++    +++.+++|++||||+ |.||+.|+++++|+
T Consensus        77 k~g~~R~dll~~N~~i~~~~~~~i~~~~p~~~vivvsNP~d~~t~~----~~~~sg~p~~~viG~gt~LDs~R~~~~la~  152 (299)
T TIGR01771        77 KPGETRLELVGRNVRIMKSIVPEVVKSGFDGIFLVATNPVDILTYV----AWKLSGFPKNRVIGSGTVLDTARLRYLLAE  152 (299)
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHH----HHHHhCCCHHHEEeccchHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999999865    478889999999999 89999999999999


Q ss_pred             HhCCCCCCCcceEEeecCCccccccccccCCCC-C---C-------ChHHHHHHHHHHhcchhHHHhhhccCCcchhhHH
Q 018512          202 VLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPC-S---F-------TQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMA  270 (354)
Q Consensus       202 ~l~v~~~~v~~~v~G~hg~~~~vp~~s~~~v~~-~---~-------~~~~~~~i~~~v~~~~~~i~~~~~~kg~~~~s~A  270 (354)
                      ++|+++++|+++|||+||+ +++|+||++++.+ +   +       .+.+++++.+++++++++|++   +||+++|++|
T Consensus       153 ~l~v~~~~V~~~v~GeHG~-s~vp~~S~~~v~g~pl~~~~~~~~~~~~~~~~~i~~~v~~~g~~ii~---~kG~t~~~~a  228 (299)
T TIGR01771       153 KLGVDPQSVHAYIIGEHGD-SEVPVWSSATIGGVPLLDYLKAKGTETDLDLEEIEKEVRDAAYEIIN---RKGATYYGIG  228 (299)
T ss_pred             HhCcCcCeEEEEEEecCCC-ceeeceeeeEECCEEHHHHhhhcccccHHHHHHHHHHHHHHHHHHhh---cCCeeeHHHH
Confidence            9999999999999999999 9999999998743 1   1       133467999999999999999   5789999999


Q ss_pred             HHHHHHHHHHHhccCCCCcEEEee-eeeccC-CCccEEEEeEEEcCCCeEEeccCCCCCHHHHHHHHHHHHHHHH
Q 018512          271 YAAVKFADACLRGLRGDAGVVECA-FVASQV-TELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAG  343 (354)
Q Consensus       271 ~a~~~ii~si~~~~~~~~~v~~~~-~~~g~~-~~~~~~svPv~ig~~Gv~~i~~~~~L~~~E~~~l~~sa~~i~~  343 (354)
                      .++++++++|++|++   .++||+ +++|+| .+++|||+||+||++|+++++++ +|+++|+++|++|++.|++
T Consensus       229 ~a~~~~i~ail~d~~---~v~~~s~~~~g~yg~~~~~~s~P~~ig~~Gv~~i~~l-~L~~~E~~~l~~s~~~ik~  299 (299)
T TIGR01771       229 MAVARIVEAILHDEN---RVLPVSAYLDGEYGIKDVYIGVPAVLGRNGVEEIIEL-PLSDEEKEAFQKSAETLKK  299 (299)
T ss_pred             HHHHHHHHHHHcCCC---cEEEEEEEecccCCCCCEEEEEEEEEeCCeeEEEccC-CCCHHHHHHHHHHHHHHhC
Confidence            999999999999975   489997 779999 67899999999999999999995 9999999999999999974

This model represents the NAD-dependent L-lactate dehydrogenases from bacteria and eukaryotes. This enzyme function as as the final step in anaerobic glycolysis. Although lactate dehydrogenases have in some cases been mistaken for malate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of malate dehydrogenases.

>PRK05442 malate dehydrogenase; Provisional

Probab=100.00  E-value=6.2e-60  Score=452.15  Aligned_cols=298  Identities=22%  Similarity=0.301  Sum_probs=262.4

Q ss_pred             CCCeEEEEcCCCchHHHHHHHHHhCCCCc-----EEEEEecCC----chhHHHHHhcCCC-C-CeEEEEeCCCcHHhhhC
Q 018512           41 AGFKVAILGAAGGIGQPLAMLMKINPLVS-----VLHLYDVVN----TPGVTADISHMDT-G-AVVRGFLGQPQLENALT  109 (354)
Q Consensus        41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~-----ei~L~D~~~----~~g~~~dl~~~~~-~-~~v~~~~~~~d~~~al~  109 (354)
                      +|+||+||||+|+||+++++.|+..++++     +|+|+|+++    ++|+++||+|+.. . ..++..  +++ +++++
T Consensus         3 ~~~KV~IiGaaG~VG~~~a~~l~~~~~~~~~~~~el~LiDi~~~~~~~~g~a~Dl~~~~~~~~~~~~i~--~~~-y~~~~   79 (326)
T PRK05442          3 APVRVAVTGAAGQIGYSLLFRIASGDMLGKDQPVILQLLEIPPALKALEGVVMELDDCAFPLLAGVVIT--DDP-NVAFK   79 (326)
T ss_pred             CCcEEEEECCCcHHHHHHHHHHHhhhhcCCCCccEEEEEecCCcccccceeehhhhhhhhhhcCCcEEe--cCh-HHHhC
Confidence            46799999988999999999999988888     999999954    6899999999862 1 234332  344 68999


Q ss_pred             CCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecCCCCCchHHHHHHHHHhC-CCCCCCEEEe
Q 018512          110 GMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNSTVPIAAEVFKKAG-TYDPKKLLGV  187 (354)
Q Consensus       110 ~aDvVIi~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~-p~a~viv~tNPv~~~~~~~~~~~~~~~-~~p~~kviG~  187 (354)
                      |||+||++||.++++|++|.|++..|++++++++++|.+++ |++++|++|||+|++||++    ++.+ |||++||||+
T Consensus        80 daDiVVitaG~~~k~g~tR~dll~~Na~i~~~i~~~i~~~~~~~~iiivvsNPvDv~t~v~----~k~s~g~p~~rViG~  155 (326)
T PRK05442         80 DADVALLVGARPRGPGMERKDLLEANGAIFTAQGKALNEVAARDVKVLVVGNPANTNALIA----MKNAPDLPAENFTAM  155 (326)
T ss_pred             CCCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeCCchHHHHHHH----HHHcCCCCHHHEEee
Confidence            99999999999999999999999999999999999999988 7999999999999998765    6777 9999999999


Q ss_pred             ccchHHHHHHHHHHHhCCCCCCCcce-EEeecCCccccccccccCCCC----C-CChHH--HHHHHHHHhcchhHHHhhh
Q 018512          188 TMLDVVRANTFVAEVLGLDPRDVDVP-VVGGHAGVTILPLLSQVKPPC----S-FTQEE--TEYLTNRIQNGGTEVVEAK  259 (354)
Q Consensus       188 t~ld~~r~~~~la~~l~v~~~~v~~~-v~G~hg~~~~vp~~s~~~v~~----~-~~~~~--~~~i~~~v~~~~~~i~~~~  259 (354)
                      |.||+.||++++|+++++++++|+++ ||||||+ +++|+||++++..    . +++.+  +++|.+++++++++|++  
T Consensus       156 t~LDs~R~r~~la~~l~v~~~~V~~~vV~GeHG~-s~~~~~S~~~v~g~pl~~~~~~~~~~~~~i~~~v~~~g~~Ii~--  232 (326)
T PRK05442        156 TRLDHNRALSQLAAKAGVPVADIKKMTVWGNHSA-TQYPDFRHATIDGKPAAEVINDQAWLEDTFIPTVQKRGAAIIE--  232 (326)
T ss_pred             eHHHHHHHHHHHHHHhCcChHHeEEeEEEECCcC-ceeeccccCEECCEEHHHHccchhhHHHHHHHHHHhhHHHHHh--
Confidence            99999999999999999999999986 5999999 9999999998853    1 34433  57899999999999999  


Q ss_pred             ccCCcchhhHHHH-HHHHHHHHHhccCCCCcEEEee-eeeccC--CCccEEEEeEEEcCCCeEEeccCCCCCHHHHHHHH
Q 018512          260 AGAGSATLSMAYA-AVKFADACLRGLRGDAGVVECA-FVASQV--TELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLE  335 (354)
Q Consensus       260 ~~kg~~~~s~A~a-~~~ii~si~~~~~~~~~v~~~~-~~~g~~--~~~~~~svPv~ig~~Gv~~i~~~~~L~~~E~~~l~  335 (354)
                       +||+++|++|.+ +++++++|++|.+.+ .++|++ +++|+|  |+++|||+||++| +|+++++..++|+++|+++|+
T Consensus       233 -~kG~t~~~~a~~~~~~iv~ail~~~~~~-~i~~~sv~~~g~ygi~~~v~~s~P~~ig-~Gv~~iv~~l~L~~~E~~~l~  309 (326)
T PRK05442        233 -ARGASSAASAANAAIDHVRDWVLGTPEG-DWVSMGVPSDGSYGIPEGLIFGFPVTCE-NGEYEIVQGLEIDDFSREKID  309 (326)
T ss_pred             -CcCCccHHHHHHHHHHHHHHHHhCCCCC-eEEEEEEEecCccCCcCCeEEEEEEEEc-CcEEEEeCCCCCCHHHHHHHH
Confidence             578999999999 599999999995222 499998 569999  5899999999999 999999653499999999999


Q ss_pred             HHHHHHHHHHHHhhhh
Q 018512          336 KAKKELAGSIQKGISF  351 (354)
Q Consensus       336 ~sa~~i~~~~~~~~~~  351 (354)
                      +|+++|+++.+.+..+
T Consensus       310 ~s~~~l~~~~~~~~~~  325 (326)
T PRK05442        310 ATLAELEEERDAVKHL  325 (326)
T ss_pred             HHHHHHHHHHHHHHhh
Confidence            9999999999887654

>cd00704 MDH Malate dehydrogenase

Probab=100.00  E-value=2.3e-59  Score=448.31  Aligned_cols=294  Identities=28%  Similarity=0.381  Sum_probs=260.1

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCc-----EEEEEecCC----chhHHHHHhcCCC--CCeEEEEeCCCcHHhhhCCC
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVS-----VLHLYDVVN----TPGVTADISHMDT--GAVVRGFLGQPQLENALTGM  111 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~-----ei~L~D~~~----~~g~~~dl~~~~~--~~~v~~~~~~~d~~~al~~a  111 (354)
                      .||+||||+|+||+++++.|+..++++     +|+|+|+++    ++++++||.|+..  .......  . +.+++++||
T Consensus         1 ~KV~IiGAaG~VG~~~a~~L~~~~~~~~~~~~~l~L~Di~~~~~~~~g~~~Dl~d~~~~~~~~~~i~--~-~~~~~~~~a   77 (323)
T cd00704           1 LHVLITGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPPAMKALEGVVMELQDCAFPLLKGVVIT--T-DPEEAFKDV   77 (323)
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCccCCCCceEEEEEecCCccCccceeeeehhhhcccccCCcEEe--c-ChHHHhCCC
Confidence            389999999999999999999988877     599999985    6888999999852  1223321  2 346899999


Q ss_pred             cEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecCCCCCchHHHHHHHHHhCC-CCCCCEEEecc
Q 018512          112 DLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNSTVPIAAEVFKKAGT-YDPKKLLGVTM  189 (354)
Q Consensus       112 DvVIi~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~-p~a~viv~tNPv~~~~~~~~~~~~~~~~-~p~~kviG~t~  189 (354)
                      |+||++||.|+++|++|.|++..|++++++++++|++++ |++++|++|||+|++|+++    ++.+| +|++||||+|.
T Consensus        78 DiVVitAG~~~~~g~tR~dll~~N~~i~~~i~~~i~~~~~~~~iiivvsNPvD~~t~~~----~k~sg~~p~~~vig~t~  153 (323)
T cd00704          78 DVAILVGAFPRKPGMERADLLRKNAKIFKEQGEALNKVAKPTVKVLVVGNPANTNALIA----LKNAPNLPPKNFTALTR  153 (323)
T ss_pred             CEEEEeCCCCCCcCCcHHHHHHHhHHHHHHHHHHHHHhCCCCeEEEEeCCcHHHHHHHH----HHHcCCCCHHHEEEeeH
Confidence            999999999999999999999999999999999999996 9999999999999998764    78889 59999999999


Q ss_pred             chHHHHHHHHHHHhCCCCCCC-cceEEeecCCccccccccccCCCC-C--------CChH-HHHHHHHHHhcchhHHHhh
Q 018512          190 LDVVRANTFVAEVLGLDPRDV-DVPVVGGHAGVTILPLLSQVKPPC-S--------FTQE-ETEYLTNRIQNGGTEVVEA  258 (354)
Q Consensus       190 ld~~r~~~~la~~l~v~~~~v-~~~v~G~hg~~~~vp~~s~~~v~~-~--------~~~~-~~~~i~~~v~~~~~~i~~~  258 (354)
                      ||+.||++++|++++++|++| .++||||||+ +++|+||++++.. +        ++++ ..++|.+++++++++|++ 
T Consensus       154 LDs~R~r~~la~~l~v~~~~V~~~~V~GeHG~-s~v~~~S~~~v~g~~~~~~~~~~~~~~~~~~~i~~~v~~~~~~Ii~-  231 (323)
T cd00704         154 LDHNRAKAQVARKLGVRVSDVKNVIIWGNHSN-TQVPDLSNAVVYGPGGTEWVLDLLDEEWLNDEFVKTVQKRGAAIIK-  231 (323)
T ss_pred             HHHHHHHHHHHHHhCcCHHHceeeeEEecccC-ceeeccccceecCccHHHhcccccChHHHHHHHHHHHHhhHHHHHh-
Confidence            999999999999999999999 5689999999 9999999998743 1        2222 257899999999999999 


Q ss_pred             hccCCcchhh-HHHHHHHHHHHHHhccCCCCcEEEee-eeeccC---CCccEEEEeEEEcCCCeEEeccCCCCCHHHHHH
Q 018512          259 KAGAGSATLS-MAYAAVKFADACLRGLRGDAGVVECA-FVASQV---TELPFFASKVRLGRQGAEEIFQLGPLNEYERIG  333 (354)
Q Consensus       259 ~~~kg~~~~s-~A~a~~~ii~si~~~~~~~~~v~~~~-~~~g~~---~~~~~~svPv~ig~~Gv~~i~~~~~L~~~E~~~  333 (354)
                        +||+++|+ +|.++++++++|++|++.+ .++||+ +++|+|   |+++|||+||+||++|++++.++ +|+++|+++
T Consensus       232 --~kg~t~~~~~a~a~~~iv~ail~~~~~~-~v~~~s~~~~g~y~gi~~~v~~s~P~~ig~~Gv~~v~~l-~L~~~E~~~  307 (323)
T cd00704         232 --KRGASSAASAAKAIADHVKDWLFGTPPG-EIVSMGVYSPGNPYGIPPGIVFSFPCTCKGGGWHVVEDL-KLNDWLREK  307 (323)
T ss_pred             --ccCcchhHHHHHHHHHHHHHHHhCCCCC-cEEEEEEEeCCccCCCCCceEEEEEEEEcCCEEEEecCC-CCCHHHHHH
Confidence              46889996 6999999999999998744 499998 789988   47999999999999999999995 999999999


Q ss_pred             HHHHHHHHHHHHHHhh
Q 018512          334 LEKAKKELAGSIQKGI  349 (354)
Q Consensus       334 l~~sa~~i~~~~~~~~  349 (354)
                      |++|++.|+++.+.++
T Consensus       308 l~~s~~~l~~~~~~~~  323 (323)
T cd00704         308 LKATEEELIEEKEIAL  323 (323)
T ss_pred             HHHHHHHHHHHHHhhC
Confidence            9999999999988764

Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PLN00112 malate dehydrogenase (NADP); Provisional

Probab=100.00  E-value=5.4e-59  Score=457.90  Aligned_cols=299  Identities=22%  Similarity=0.268  Sum_probs=263.5

Q ss_pred             CCCCeEEEEcCCCchHHHHHHHHHhC-------CCCcEEEEEecCC--chhHHHHHhcCCC--CCeEEEEeCCCcHHhhh
Q 018512           40 AAGFKVAILGAAGGIGQPLAMLMKIN-------PLVSVLHLYDVVN--TPGVTADISHMDT--GAVVRGFLGQPQLENAL  108 (354)
Q Consensus        40 ~~~~kI~IiGa~G~vG~~~a~~l~~~-------~~~~ei~L~D~~~--~~g~~~dl~~~~~--~~~v~~~~~~~d~~~al  108 (354)
                      .++.||+||||+|+||+++++.|+.+       ++..||+|+|+++  ++|+++||+|+.+  ...+..  .+++ ++++
T Consensus        98 ~~~~KV~IIGAaG~VG~~~A~~L~~~~v~g~~~~i~~eLvliD~~~~~a~G~amDL~daa~~~~~~v~i--~~~~-ye~~  174 (444)
T PLN00112         98 KKLINVAVSGAAGMISNHLLFKLASGEVFGPDQPIALKLLGSERSKQALEGVAMELEDSLYPLLREVSI--GIDP-YEVF  174 (444)
T ss_pred             CCCeEEEEECCCcHHHHHHHHHHHhcccccCCCCcccEEEEEcCCcchhHHHHHHHHHhhhhhcCceEE--ecCC-HHHh
Confidence            44689999999999999999999998       6677999999988  7999999999863  122332  2345 5889


Q ss_pred             CCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhh-hCCCeEEEEecCCCCCchHHHHHHHHHhCCCCCCCEEEe
Q 018512          109 TGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAK-CCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV  187 (354)
Q Consensus       109 ~~aDvVIi~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~-~~p~a~viv~tNPv~~~~~~~~~~~~~~~~~p~~kviG~  187 (354)
                      +|||+||++||.|+++|++|.|++..|++++++++++|.+ ++|+++||++|||+|++|+++    ++.+++|++|+||+
T Consensus       175 kdaDiVVitAG~prkpG~tR~dLl~~N~~I~k~i~~~I~~~a~p~~ivIVVsNPvDv~t~v~----~k~sg~~~~rViGt  250 (444)
T PLN00112        175 QDAEWALLIGAKPRGPGMERADLLDINGQIFAEQGKALNEVASRNVKVIVVGNPCNTNALIC----LKNAPNIPAKNFHA  250 (444)
T ss_pred             CcCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEcCCcHHHHHHHH----HHHcCCCCcceEEe
Confidence            9999999999999999999999999999999999999999 589999999999999998765    78889999999999


Q ss_pred             -ccchHHHHHHHHHHHhCCCCCCC-cceEEeecCCccccccccccCCCC-C----CChHH--HHHHHHHHhcchhHHHhh
Q 018512          188 -TMLDVVRANTFVAEVLGLDPRDV-DVPVVGGHAGVTILPLLSQVKPPC-S----FTQEE--TEYLTNRIQNGGTEVVEA  258 (354)
Q Consensus       188 -t~ld~~r~~~~la~~l~v~~~~v-~~~v~G~hg~~~~vp~~s~~~v~~-~----~~~~~--~~~i~~~v~~~~~~i~~~  258 (354)
                       |.||++||+++||+++||++++| +++||||||+ ++||+||++++++ +    +++.+  +++|.+++++++++|++ 
T Consensus       251 gT~LDsaR~r~~LA~~l~V~~~~V~~~~V~GeHGd-sqvp~wS~a~V~G~pl~e~i~~~~~~~~ei~~~v~~~g~~Ii~-  328 (444)
T PLN00112        251 LTRLDENRAKCQLALKAGVFYDKVSNVTIWGNHST-TQVPDFLNAKINGLPVKEVITDHKWLEEEFTPKVQKRGGVLIK-  328 (444)
T ss_pred             eccHHHHHHHHHHHHHhCcCHHHcccceEEecCCC-ceeeccceeEECCccHHHhhccccchHHHHHHHHHHHHHHHHh-
Confidence             89999999999999999999999 5699999999 9999999999853 2    23333  67899999999999999 


Q ss_pred             hccCCcchh-hHHHHHHHHHHHHHhccCCCCcEEEee-eeec-cC--CCccEEEEeEEEcCCCeEEec-cCCCCCHHHHH
Q 018512          259 KAGAGSATL-SMAYAAVKFADACLRGLRGDAGVVECA-FVAS-QV--TELPFFASKVRLGRQGAEEIF-QLGPLNEYERI  332 (354)
Q Consensus       259 ~~~kg~~~~-s~A~a~~~ii~si~~~~~~~~~v~~~~-~~~g-~~--~~~~~~svPv~ig~~Gv~~i~-~~~~L~~~E~~  332 (354)
                        +||++.| ++|.++++++++|+++.+. +.++|++ +++| +|  ++|++||+||++|++|+++++ ++ +|+++|++
T Consensus       329 --~kG~t~~~s~a~ai~~~I~ail~~~d~-~~vlpvsv~l~G~~YGi~~dv~~SvPvvig~~Gv~~Iv~el-~L~~~E~~  404 (444)
T PLN00112        329 --KWGRSSAASTAVSIADAIKSLVTPTPE-GDWFSTGVYTDGNPYGIAEGLVFSMPCRSKGDGDYEIVKDV-EIDDYLRE  404 (444)
T ss_pred             --ccCchhHHHHHHHHHHHHHHHHcCCCC-CeEEEEEEEeCCcccCCCCCeEEEeEEEEeCCeeEEECCCC-CCCHHHHH
Confidence              5677777 9999999999999954433 2599998 6799 58  589999999999999999999 65 99999999


Q ss_pred             HHHHHHHHHHHHHHHhhhh
Q 018512          333 GLEKAKKELAGSIQKGISF  351 (354)
Q Consensus       333 ~l~~sa~~i~~~~~~~~~~  351 (354)
                      +|++|+++|.++.+.+..+
T Consensus       405 ~l~~Sa~~L~~e~~~~~~~  423 (444)
T PLN00112        405 RIKKSEAELLAEKRCVAHL  423 (444)
T ss_pred             HHHHHHHHHHHHHHHHHHH
Confidence            9999999999999887654

>TIGR01757 Malate-DH_plant malate dehydrogenase, NADP-dependent

Probab=100.00  E-value=1e-58  Score=449.78  Aligned_cols=300  Identities=22%  Similarity=0.256  Sum_probs=261.4

Q ss_pred             CCCCCeEEEEcCCCchHHHHHHHHHhCCCCc-----EEEEE--ecCC--chhHHHHHhcCCC-C-CeEEEEeCCCcHHhh
Q 018512           39 GAAGFKVAILGAAGGIGQPLAMLMKINPLVS-----VLHLY--DVVN--TPGVTADISHMDT-G-AVVRGFLGQPQLENA  107 (354)
Q Consensus        39 ~~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~-----ei~L~--D~~~--~~g~~~dl~~~~~-~-~~v~~~~~~~d~~~a  107 (354)
                      ..++.||+||||+|+||+++|+.|+..++++     .|+|+  |+++  ++|+++||.|+.+ . ..+...  +++ +++
T Consensus        41 ~~~p~KV~IIGAaG~VG~~~A~~l~~~~l~~~~~ei~L~L~diD~~~~~a~g~a~DL~d~a~~~~~~v~i~--~~~-y~~  117 (387)
T TIGR01757        41 WKKTVNVAVSGAAGMISNHLLFMLASGEVFGQDQPIALKLLGSERSKEALEGVAMELEDSLYPLLREVSIG--IDP-YEV  117 (387)
T ss_pred             CCCCeEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEeccCccchhhhHHHHHHHHhhhhhcCceEEe--cCC-HHH
Confidence            4457899999999999999999999999887     57777  5555  7899999999862 1 223322  345 588


Q ss_pred             hCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecCCCCCchHHHHHHHHHhCCCCCCCEEE
Q 018512          108 LTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLG  186 (354)
Q Consensus       108 l~~aDvVIi~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~-p~a~viv~tNPv~~~~~~~~~~~~~~~~~p~~kviG  186 (354)
                      ++|||+||++||.|+++|++|.|++..|+++++++++.|++++ |++++|++|||+|++|+++    ++.+++|++|+||
T Consensus       118 ~kdaDIVVitAG~prkpg~tR~dll~~N~~I~k~i~~~I~~~a~~~~iviVVsNPvDv~t~v~----~k~sg~~~~rviG  193 (387)
T TIGR01757       118 FEDADWALLIGAKPRGPGMERADLLDINGQIFADQGKALNAVASKNCKVLVVGNPCNTNALIA----MKNAPNIPRKNFH  193 (387)
T ss_pred             hCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCCcHHHHHHHH----HHHcCCCcccEEE
Confidence            9999999999999999999999999999999999999999987 9999999999999998765    7888999999999


Q ss_pred             e-ccchHHHHHHHHHHHhCCCCCCC-cceEEeecCCccccccccccCCCC-C----CChHH--HHHHHHHHhcchhHHHh
Q 018512          187 V-TMLDVVRANTFVAEVLGLDPRDV-DVPVVGGHAGVTILPLLSQVKPPC-S----FTQEE--TEYLTNRIQNGGTEVVE  257 (354)
Q Consensus       187 ~-t~ld~~r~~~~la~~l~v~~~~v-~~~v~G~hg~~~~vp~~s~~~v~~-~----~~~~~--~~~i~~~v~~~~~~i~~  257 (354)
                      + |.||++||+++||+++++++++| +++||||||+ +++|+||++++.+ +    +++.+  +++|.+++++++++|++
T Consensus       194 ~gT~LDsaR~r~~LA~~l~v~~~~V~~~~V~GeHGd-s~vp~~S~a~V~G~pl~~~~~~~~~~~~ei~~~v~~~g~eIi~  272 (387)
T TIGR01757       194 ALTRLDENRAKCQLALKSGKFYTSVSNVTIWGNHST-TQVPDFVNAKIGGRPAKEVIKDTKWLEEEFTPTVQKRGGALIK  272 (387)
T ss_pred             ecchhHHHHHHHHHHHHHCcChhHcceeEEEecCCC-cEEecceeeEECCEEhHHhcccccchHHHHHHHHHHHHHHHHh
Confidence            9 89999999999999999999999 5999999999 9999999998753 2    22223  68899999999999999


Q ss_pred             hhccCCcchh-hHHHHHHHHHHHHHhccCCCCcEEEee-eeecc-C--CCccEEEEeEEEcCCCeEEec-cCCCCCHHHH
Q 018512          258 AKAGAGSATL-SMAYAAVKFADACLRGLRGDAGVVECA-FVASQ-V--TELPFFASKVRLGRQGAEEIF-QLGPLNEYER  331 (354)
Q Consensus       258 ~~~~kg~~~~-s~A~a~~~ii~si~~~~~~~~~v~~~~-~~~g~-~--~~~~~~svPv~ig~~Gv~~i~-~~~~L~~~E~  331 (354)
                         +||++.| ++|.++++++++|+++.+.+ .++|++ +++|+ |  ++++|||+||++|++|+++++ ++ +|+++|+
T Consensus       273 ---~KG~t~~~s~a~ai~~~i~ai~~g~d~~-~il~vsv~~~Ge~YGi~~gv~~S~Pvvig~~Gv~~Iv~~l-~L~~~E~  347 (387)
T TIGR01757       273 ---KWGRSSAASTAVSIADAIKSLVVPTPEG-DWFSTGVYTDGNPYGIAEGLVFSMPCRSKGDGDYELATDV-SMDDFLR  347 (387)
T ss_pred             ---ccCchhHHHHHHHHHHHHHHHhcCCCCC-eEEEEEEEeCCcccCCCCCEEEEEEEEEeCCEEEEECCCC-CCCHHHH
Confidence               4677777 99999999999999554332 599998 56996 8  489999999999999999996 75 9999999


Q ss_pred             HHHHHHHHHHHHHHHHhhhh
Q 018512          332 IGLEKAKKELAGSIQKGISF  351 (354)
Q Consensus       332 ~~l~~sa~~i~~~~~~~~~~  351 (354)
                      ++|++|++.|+++.+.+++.
T Consensus       348 ~~l~~Sa~~L~~e~~~~~~~  367 (387)
T TIGR01757       348 ERIRKSEDELLKEKECVAHL  367 (387)
T ss_pred             HHHHHHHHHHHHHHHHHHHh
Confidence            99999999999999988764

This model represents the NADP-dependent malate dehydrogenase found in plants, mosses and green algae and localized to the chloroplast. Malate dehydrogenase converts oxaloacetate into malate, a critical step in the C4 cycle which allows circumvention of the effects of photorespiration. Malate is subsequenctly transported from the chloroplast to the cytoplasm (and then to the bundle sheath cells in C4 plants). The plant and moss enzymes are light regulated via cysteine disulfide bonds. The enzyme from Sorghum has been crystallized.

>PTZ00117 malate dehydrogenase; Provisional

Probab=100.00  E-value=3.5e-58  Score=440.55  Aligned_cols=297  Identities=31%  Similarity=0.514  Sum_probs=265.5

Q ss_pred             CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCCC--CeEEEEeCCCcHHhhhCCCcEEEE
Q 018512           41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTG--AVVRGFLGQPQLENALTGMDLVII  116 (354)
Q Consensus        41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~~--~~v~~~~~~~d~~~al~~aDvVIi  116 (354)
                      +.+||+|||| |+||+++++.++..++ .+|+|+|+++  +.+.++|+.|....  ...+. ..++|+ ++++|||+||+
T Consensus         4 ~~~KI~IIGa-G~vG~~ia~~l~~~~~-~~l~L~Di~~~~~~g~~lDl~~~~~~~~~~~~i-~~~~d~-~~l~~ADiVVi   79 (319)
T PTZ00117          4 KRKKISMIGA-GQIGSTVALLILQKNL-GDVVLYDVIKGVPQGKALDLKHFSTLVGSNINI-LGTNNY-EDIKDSDVVVI   79 (319)
T ss_pred             CCcEEEEECC-CHHHHHHHHHHHHCCC-CeEEEEECCCccchhHHHHHhhhccccCCCeEE-EeCCCH-HHhCCCCEEEE
Confidence            3469999999 9999999999998887 5899999987  57889999997532  12333 234676 58999999999


Q ss_pred             cCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCCchHHHHHHHHHhCCCCCCCEEEec-cchHHHH
Q 018512          117 PAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVT-MLDVVRA  195 (354)
Q Consensus       117 ~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~~~~~~~~~~p~~kviG~t-~ld~~r~  195 (354)
                      ++|.++++|++|.|++..|.++++++++.|+++||++|+|++|||+|+++++    +++.+++|++||+|+| .||+.|+
T Consensus        80 tag~~~~~g~~r~dll~~n~~i~~~i~~~i~~~~p~a~vivvsNP~di~t~~----~~~~s~~p~~rviG~gt~lds~R~  155 (319)
T PTZ00117         80 TAGVQRKEEMTREDLLTINGKIMKSVAESVKKYCPNAFVICVTNPLDCMVKV----FQEKSGIPSNKICGMAGVLDSSRF  155 (319)
T ss_pred             CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecChHHHHHHH----HHHhhCCCcccEEEecchHHHHHH
Confidence            9999999999999999999999999999999999999999999999999765    4788899999999995 8999999


Q ss_pred             HHHHHHHhCCCCCCCcceEEeecCCccccccccccCCCC----------CCChHHHHHHHHHHhcchhHHHhhhccCCcc
Q 018512          196 NTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPC----------SFTQEETEYLTNRIQNGGTEVVEAKAGAGSA  265 (354)
Q Consensus       196 ~~~la~~l~v~~~~v~~~v~G~hg~~~~vp~~s~~~v~~----------~~~~~~~~~i~~~v~~~~~~i~~~~~~kg~~  265 (354)
                      ++.+|+++|+++++|+++|+||||+ +++|+||++++++          .+.+++++++.+++++++++|++.+ |||++
T Consensus       156 ~~~la~~l~v~~~~v~~~viGeHg~-~~v~~~s~~~v~g~p~~~~~~~~~~~~~~~~~i~~~v~~~g~~ii~~~-~kg~t  233 (319)
T PTZ00117        156 RCNLAEKLGVSPGDVSAVVIGGHGD-LMVPLPRYCTVNGIPLSDFVKKGAITEKEINEIIKKTRNMGGEIVKLL-KKGSA  233 (319)
T ss_pred             HHHHHHHhCCCcccceEEEeecCCC-cEEeceeeceECCEEHHHHhhccccCHHHHHHHHHHHHHHHHHHHhhc-CCCCh
Confidence            9999999999999999999999999 9999999998742          2456668899999999999999975 78999


Q ss_pred             hhhHHHHHHHHHHHHHhccCCCCcEEEee-eeeccC-CCccEEEEeEEEcCCCeEEeccCCCCCHHHHHHHHHHHHHHHH
Q 018512          266 TLSMAYAAVKFADACLRGLRGDAGVVECA-FVASQV-TELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAG  343 (354)
Q Consensus       266 ~~s~A~a~~~ii~si~~~~~~~~~v~~~~-~~~g~~-~~~~~~svPv~ig~~Gv~~i~~~~~L~~~E~~~l~~sa~~i~~  343 (354)
                      +||+|.++++++++|++|.+   .++|++ +++|+| .+++|||+||+||++|+++++++ +|+++|+++|++|++.|++
T Consensus       234 ~~~~a~a~~~~~~ail~~~~---~v~~~s~~~~g~yg~~~~~~s~P~~ig~~Gv~~i~~l-~l~~~E~~~l~~s~~~l~~  309 (319)
T PTZ00117        234 FFAPAAAIVAMIEAYLKDEK---RVLVCSVYLNGQYNCKNLFVGVPVVIGGKGIEKVIEL-ELNAEEKELFDKSIESIQE  309 (319)
T ss_pred             HHHHHHHHHHHHHHHhcCCC---eEEEEEEEeccccCCCCeEEEEEEEEeCCeEEEEeCC-CCCHHHHHHHHHHHHHHHH
Confidence            99999999999999999875   499998 679999 46999999999999999999995 9999999999999999999


Q ss_pred             HHHHhhhh
Q 018512          344 SIQKGISF  351 (354)
Q Consensus       344 ~~~~~~~~  351 (354)
                      .++....+
T Consensus       310 ~~~~~~~~  317 (319)
T PTZ00117        310 LTQKAKAL  317 (319)
T ss_pred             HHHHHHHh
Confidence            99877654

>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases

Probab=100.00  E-value=1.3e-58  Score=441.80  Aligned_cols=288  Identities=25%  Similarity=0.399  Sum_probs=258.9

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCC--CCeEEEEeCCCcHHhhhCCCcEEEEcC
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDT--GAVVRGFLGQPQLENALTGMDLVIIPA  118 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~--~~~v~~~~~~~d~~~al~~aDvVIi~a  118 (354)
                      +||+|||+ |.+|+++++.|+..++..+|+|+|+++  +++.++||.|+..  .......  ..++ +++++||+||+++
T Consensus         1 ~kI~IIGa-G~vG~~~a~~l~~~g~~~ei~l~D~~~~~~~~~a~dL~~~~~~~~~~~~i~--~~~~-~~l~~aDIVIita   76 (306)
T cd05291           1 RKVVIIGA-GHVGSSFAYSLVNQGIADELVLIDINEEKAEGEALDLEDALAFLPSPVKIK--AGDY-SDCKDADIVVITA   76 (306)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHhHhhHHHHhhccCCCeEEE--cCCH-HHhCCCCEEEEcc
Confidence            38999998 999999999999999878999999987  6788999998753  1223332  2454 6799999999999


Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCCchHHHHHHHHHhCCCCCCCEEEe-ccchHHHHHH
Q 018512          119 GVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRANT  197 (354)
Q Consensus       119 g~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~~~~~~~~~~p~~kviG~-t~ld~~r~~~  197 (354)
                      |.|+++|++|.|++.+|+++++++++.|++++|++++|++|||+|++|+++    +++++||++||||+ |.||+.|+++
T Consensus        77 g~~~~~g~~R~dll~~N~~i~~~~~~~i~~~~~~~~vivvsNP~d~~~~~~----~~~~g~p~~~v~g~gt~LDs~R~~~  152 (306)
T cd05291          77 GAPQKPGETRLDLLEKNAKIMKSIVPKIKASGFDGIFLVASNPVDVITYVV----QKLSGLPKNRVIGTGTSLDTARLRR  152 (306)
T ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEecChHHHHHHHH----HHHhCcCHHHEeeccchHHHHHHHH
Confidence            999999999999999999999999999999999999999999999998654    77899999999999 7999999999


Q ss_pred             HHHHHhCCCCCCCcceEEeecCCccccccccccCCCC----------CCChHHHHHHHHHHhcchhHHHhhhccCCcchh
Q 018512          198 FVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPC----------SFTQEETEYLTNRIQNGGTEVVEAKAGAGSATL  267 (354)
Q Consensus       198 ~la~~l~v~~~~v~~~v~G~hg~~~~vp~~s~~~v~~----------~~~~~~~~~i~~~v~~~~~~i~~~~~~kg~~~~  267 (354)
                      ++|+++|+++++|+++|||+||+ +++|+||++++.+          .+.+++++++.+++++++++|++   +||+++|
T Consensus       153 ~la~~l~v~~~~v~~~V~G~Hg~-s~~~~~S~~~v~g~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~ii~---~kg~t~~  228 (306)
T cd05291         153 ALAEKLNVDPRSVHAYVLGEHGD-SQFVAWSTVTVGGKPLLDLLKEGKLSELDLDEIEEDVRKAGYEIIN---GKGATYY  228 (306)
T ss_pred             HHHHHHCCCcccceEEEEecCCC-ceeecceeeEEcCEEHHHHhhccccChHHHHHHHHHHHHHHHHHHH---ccCccHH
Confidence            99999999999999999999999 9999999998743          13345688999999999999999   5799999


Q ss_pred             hHHHHHHHHHHHHHhccCCCCcEEEee-eeeccC-CCccEEEEeEEEcCCCeEEeccCCCCCHHHHHHHHHHHHHHHHHH
Q 018512          268 SMAYAAVKFADACLRGLRGDAGVVECA-FVASQV-TELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSI  345 (354)
Q Consensus       268 s~A~a~~~ii~si~~~~~~~~~v~~~~-~~~g~~-~~~~~~svPv~ig~~Gv~~i~~~~~L~~~E~~~l~~sa~~i~~~~  345 (354)
                      ++|.++++++++|+++.+   .++|++ +++|+| ++++|||+||+||++|+++++++ +|+++|+++|++|+++|++.+
T Consensus       229 ~~a~a~~~~~~ail~~~~---~v~~~s~~~~g~yg~~~v~~s~P~~ig~~Gv~~i~~~-~l~~~E~~~l~~s~~~l~~~~  304 (306)
T cd05291         229 GIATALARIVKAILNDEN---AILPVSAYLDGEYGEKDVYIGVPAIIGRNGVEEVIEL-DLTEEEQEKFEKSADIIKENI  304 (306)
T ss_pred             HHHHHHHHHHHHHHcCCC---EEEEEEEEeccccCCCCEEEEEEEEEeCCCEEEEECC-CCCHHHHHHHHHHHHHHHHHh
Confidence            999999999999999865   488998 679999 78999999999999999999995 999999999999999999876


Q ss_pred             H
Q 018512          346 Q  346 (354)
Q Consensus       346 ~  346 (354)
                      +
T Consensus       305 ~  305 (306)
T cd05291         305 K  305 (306)
T ss_pred             h
Confidence            5

L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine

>cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases

Probab=100.00  E-value=2.1e-58  Score=441.43  Aligned_cols=295  Identities=22%  Similarity=0.306  Sum_probs=262.4

Q ss_pred             CCCeEEEEcCCCchHHHHHHHHHhCCCCc-----EEEEEecCC----chhHHHHHhcCCC--CCeEEEEeCCCcHHhhhC
Q 018512           41 AGFKVAILGAAGGIGQPLAMLMKINPLVS-----VLHLYDVVN----TPGVTADISHMDT--GAVVRGFLGQPQLENALT  109 (354)
Q Consensus        41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~-----ei~L~D~~~----~~g~~~dl~~~~~--~~~v~~~~~~~d~~~al~  109 (354)
                      +|+||+||||+|+||+++++.|+..++++     ||+|+|+++    ++|+++||+|+..  ...++..  +++ +++++
T Consensus         1 ~p~KV~IiGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~i~--~~~-~~~~~   77 (322)
T cd01338           1 KPVRVAVTGAAGQIGYSLLFRIASGEMFGPDQPVILQLLELPQALKALEGVAMELEDCAFPLLAEIVIT--DDP-NVAFK   77 (322)
T ss_pred             CCeEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEEecCCcccccceeehhhhhccccccCceEEe--cCc-HHHhC
Confidence            46799999988999999999999999998     999999954    6899999999863  1234432  344 68899


Q ss_pred             CCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecCCCCCchHHHHHHHHHhC-CCCCCCEEEe
Q 018512          110 GMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNSTVPIAAEVFKKAG-TYDPKKLLGV  187 (354)
Q Consensus       110 ~aDvVIi~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~-p~a~viv~tNPv~~~~~~~~~~~~~~~-~~p~~kviG~  187 (354)
                      |||+||++||.++++|++|.|++..|++++++++++|++++ |++++|++|||+|++|+++    ++.+ +||++||||+
T Consensus        78 daDivvitaG~~~k~g~tR~dll~~N~~i~~~i~~~i~~~~~~~~iiivvsNPvD~~t~~~----~k~sg~~p~~~ViG~  153 (322)
T cd01338          78 DADWALLVGAKPRGPGMERADLLKANGKIFTAQGKALNDVASRDVKVLVVGNPCNTNALIA----MKNAPDIPPDNFTAM  153 (322)
T ss_pred             CCCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEecCcHHHHHHHH----HHHcCCCChHheEEe
Confidence            99999999999999999999999999999999999999999 5999999999999998765    6778 5999999999


Q ss_pred             ccchHHHHHHHHHHHhCCCCCCCcc-eEEeecCCccccccccccCCCC-C----CChHH--HHHHHHHHhcchhHHHhhh
Q 018512          188 TMLDVVRANTFVAEVLGLDPRDVDV-PVVGGHAGVTILPLLSQVKPPC-S----FTQEE--TEYLTNRIQNGGTEVVEAK  259 (354)
Q Consensus       188 t~ld~~r~~~~la~~l~v~~~~v~~-~v~G~hg~~~~vp~~s~~~v~~-~----~~~~~--~~~i~~~v~~~~~~i~~~~  259 (354)
                      |.||+.||++.+|+++|+++++|++ +|||+||+ +++|+||++.+.+ +    +.+.+  +++|.+++++++++|++  
T Consensus       154 t~LDs~Rl~~~la~~lgv~~~~v~~~~V~GeHG~-s~vp~~S~~~v~g~pl~~~~~~~~~~~~~i~~~v~~~g~~Ii~--  230 (322)
T cd01338         154 TRLDHNRAKSQLAKKAGVPVTDVKNMVIWGNHSP-TQYPDFTNATIGGKPAAEVINDRAWLEDEFIPTVQKRGAAIIK--  230 (322)
T ss_pred             hHHHHHHHHHHHHHHhCcChhHeEEEEEEeCCcc-cEEEehhhcEECCEeHHHhcChHhhHHHHHHHHHHhhHHHHHh--
Confidence            9999999999999999999999997 56999999 9999999998742 1    34443  57899999999999999  


Q ss_pred             ccCCcchhhHH-HHHHHHHHHHHhccCCCCcEEEee-eeeccC--CCccEEEEeEEEcCCCeEEeccCCCCCHHHHHHHH
Q 018512          260 AGAGSATLSMA-YAAVKFADACLRGLRGDAGVVECA-FVASQV--TELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLE  335 (354)
Q Consensus       260 ~~kg~~~~s~A-~a~~~ii~si~~~~~~~~~v~~~~-~~~g~~--~~~~~~svPv~ig~~Gv~~i~~~~~L~~~E~~~l~  335 (354)
                       +||+++|++| .++++++++|++|++.+ .++|++ +++|+|  |+++|||+||++|++|+++++++ +|+++|+++|+
T Consensus       231 -~kG~t~~~~~a~a~~~iv~ail~~~~~~-~i~~~sv~~~g~yg~~~~v~~s~P~~ig~~Gv~~i~~l-~L~~~E~~~l~  307 (322)
T cd01338         231 -ARGASSAASAANAAIDHMRDWVLGTPEG-DWFSMAVPSDGSYGIPEGLIFSFPVRSKGGGYEIVEGL-EIDDFAREKID  307 (322)
T ss_pred             -CcCCccHHHHHHHHHHHHHHHhcCCCCC-eEEEEEEEccCccCCCCCeEEEEEEEEeCCEEEEEeCC-CCCHHHHHHHH
Confidence             5789999999 59999999999998522 489998 569999  58999999999999999999996 99999999999


Q ss_pred             HHHHHHHHHHHHh
Q 018512          336 KAKKELAGSIQKG  348 (354)
Q Consensus       336 ~sa~~i~~~~~~~  348 (354)
                      +|++.|+++.+.+
T Consensus       308 ~s~~~l~~~~~~~  320 (322)
T cd01338         308 ATLAELLEEREAV  320 (322)
T ss_pred             HHHHHHHHHHHHh
Confidence            9999999988765

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PTZ00082 L-lactate dehydrogenase; Provisional

Probab=100.00  E-value=7.5e-58  Score=438.03  Aligned_cols=293  Identities=33%  Similarity=0.577  Sum_probs=262.0

Q ss_pred             CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCC--CCeEEEEeCCCcHHhhhCCCcEEEE
Q 018512           41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDT--GAVVRGFLGQPQLENALTGMDLVII  116 (354)
Q Consensus        41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~--~~~v~~~~~~~d~~~al~~aDvVIi  116 (354)
                      +.+||+|||| |+||+++++.++..++. +|+|+|+++  +.+.++|+.|...  ....+.. .++|+ ++++|||+||+
T Consensus         5 ~~~KI~IIGa-G~vG~~ia~~la~~gl~-~i~LvDi~~~~~~~~~ld~~~~~~~~~~~~~I~-~~~d~-~~l~~aDiVI~   80 (321)
T PTZ00082          5 KRRKISLIGS-GNIGGVMAYLIVLKNLG-DVVLFDIVKNIPQGKALDISHSNVIAGSNSKVI-GTNNY-EDIAGSDVVIV   80 (321)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCC-eEEEEeCCCchhhHHHHHHHhhhhccCCCeEEE-ECCCH-HHhCCCCEEEE
Confidence            4469999998 99999999999998874 699999988  5778899998742  1223332 34676 78999999999


Q ss_pred             cCCCCCCCCC-----CHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCCchHHHHHHHHHhCCCCCCCEEEec-cc
Q 018512          117 PAGVPRKPGM-----TRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVT-ML  190 (354)
Q Consensus       117 ~ag~~~~~g~-----~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~~~~~~~~~~p~~kviG~t-~l  190 (354)
                      ++|.++++|+     +|.+++..|++++++++++|+++||++|+|++|||+|++++.    +++.+++|++||+|+| .|
T Consensus        81 tag~~~~~~~~~~~~~r~~~l~~n~~i~~~i~~~i~~~~p~a~~iv~sNP~di~t~~----~~~~sg~p~~rviGlgt~l  156 (321)
T PTZ00082         81 TAGLTKRPGKSDKEWNRDDLLPLNAKIMDEVAEGIKKYCPNAFVIVITNPLDVMVKL----LQEHSGLPKNKVCGMAGVL  156 (321)
T ss_pred             CCCCCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCcHHHHHHH----HHHhcCCChhhEEEecCcc
Confidence            9999999999     999999999999999999999999999999999999999865    4788999999999995 99


Q ss_pred             hHHHHHHHHHHHhCCCCCCCcceEEeecCCccccccccccCCCC----------CCChHHHHHHHHHHhcchhHHHhhhc
Q 018512          191 DVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPC----------SFTQEETEYLTNRIQNGGTEVVEAKA  260 (354)
Q Consensus       191 d~~r~~~~la~~l~v~~~~v~~~v~G~hg~~~~vp~~s~~~v~~----------~~~~~~~~~i~~~v~~~~~~i~~~~~  260 (354)
                      |+.|+++.+|+++|+++++|+++|+||||+ ++||+||++++.+          .++++++++|.+++++++++|++.+ 
T Consensus       157 ds~R~~~~la~~l~v~~~~v~~~viGeHg~-s~v~~~S~~~i~g~~~~~~~~~~~~~~~~~~~i~~~~~~~g~~i~~~~-  234 (321)
T PTZ00082        157 DSSRLRTYIAEKLGVNPRDVHASVIGAHGD-KMVPLPRYVTVGGIPLSEFIKKGLITQEEIDEIVERTRNTGKEIVDLL-  234 (321)
T ss_pred             cHHHHHHHHHHHhCCCcccceeeEEecCCC-ceEecceeeEECCEEHHHhhhcccCCHHHHHHHHHHHHHHHHHHHhhc-
Confidence            999999999999999999999999999999 9999999998742          1455668999999999999999975 


Q ss_pred             cCCcchhhHHHHHHHHHHHHHhccCCCCcEEEee-eeeccC-CCccEEEEeEEEcCCCeEEeccCCCCCHHHHHHHHHHH
Q 018512          261 GAGSATLSMAYAAVKFADACLRGLRGDAGVVECA-FVASQV-TELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAK  338 (354)
Q Consensus       261 ~kg~~~~s~A~a~~~ii~si~~~~~~~~~v~~~~-~~~g~~-~~~~~~svPv~ig~~Gv~~i~~~~~L~~~E~~~l~~sa  338 (354)
                      |||+++||+|.++++++++|++|++   .++||+ +++|+| .+++|+|+||+||++|+++++++ +|+++|+++|++|+
T Consensus       235 gkg~t~~~ia~a~~~i~~ail~d~~---~v~~vs~~~~g~yg~~~v~~s~P~~ig~~Gv~~i~~~-~l~~~E~~~l~~sa  310 (321)
T PTZ00082        235 GTGSAYFAPAAAAIEMAEAYLKDKK---RVLPCSAYLEGQYGHKDIYMGTPAVIGANGVEKIIEL-DLTPEEQKKFDESI  310 (321)
T ss_pred             CCCccHHHHHHHHHHHHHHHHcCCC---cEEEEEEEecccCCCCCeEEEEEEEEeCCeEEEEeCC-CCCHHHHHHHHHHH
Confidence            7899999999999999999999876   489998 679999 67999999999999999999995 99999999999999


Q ss_pred             HHHHHHHHH
Q 018512          339 KELAGSIQK  347 (354)
Q Consensus       339 ~~i~~~~~~  347 (354)
                      +.|++.++.
T Consensus       311 ~~i~~~~~~  319 (321)
T PTZ00082        311 KEVKRLEAL  319 (321)
T ss_pred             HHHHHHHhh
Confidence            999988654

>KOG1494 consensus NAD-dependent malate dehydrogenase [Energy production and conversion]

Probab=100.00  E-value=3.9e-58  Score=415.09  Aligned_cols=337  Identities=69%  Similarity=1.071  Sum_probs=309.0

Q ss_pred             HHHHHHHHhccCCCcccchhhhhhhhcccCCCCCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHh
Q 018512            8 NQRIARISAHLYPPNLQENSCLRQAKCRAKGGAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADIS   87 (354)
Q Consensus         8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~   87 (354)
                      .+++-+.++++.+   .+..+|..      +..+..||+|.||+|-+|+.+..+|+.+++.+++.|||+....|.+.||.
T Consensus         3 ~~~~~~~~~~~~~---~~~~~~~~------~~~~~~KVAvlGAaGGIGQPLSLLlK~np~Vs~LaLYDi~~~~GVaaDlS   73 (345)
T KOG1494|consen    3 LKSLIRSSASLSS---GPKRVFSS------GSQRGLKVAVLGAAGGIGQPLSLLLKLNPLVSELALYDIANTPGVAADLS   73 (345)
T ss_pred             hHHHHHhhhhhcc---CCcccccc------cccCcceEEEEecCCccCccHHHHHhcCcccceeeeeecccCCccccccc
Confidence            3456667777632   22222222      34555699999999999999999999999999999999988899999999


Q ss_pred             cCCCCCeEEEEeCCCcHHhhhCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCCchH
Q 018512           88 HMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVP  167 (354)
Q Consensus        88 ~~~~~~~v~~~~~~~d~~~al~~aDvVIi~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv~~~~~  167 (354)
                      |..+...+.++.+...+++|++|||+|||.||+||+|||+|+|++..|..++++++..+.++||++.+.++|||+|...+
T Consensus        74 HI~T~s~V~g~~g~~~L~~al~~advVvIPAGVPRKPGMTRDDLFn~NAgIv~~l~~aia~~cP~A~i~vIsNPVNstVP  153 (345)
T KOG1494|consen   74 HINTNSSVVGFTGADGLENALKGADVVVIPAGVPRKPGMTRDDLFNINAGIVKTLAAAIAKCCPNALILVISNPVNSTVP  153 (345)
T ss_pred             ccCCCCceeccCChhHHHHHhcCCCEEEecCCCCCCCCCcHHHhhhcchHHHHHHHHHHHhhCccceeEeecCcccccch
Confidence            99988888888777889999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhCCCCCCCEEEeccchHHHHHHHHHHHhCCCC-CCCcceEEeecCCccccccccccCCCCCCChHHHHHHHH
Q 018512          168 IAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEVLGLDP-RDVDVPVVGGHAGVTILPLLSQVKPPCSFTQEETEYLTN  246 (354)
Q Consensus       168 ~~~~~~~~~~~~p~~kviG~t~ld~~r~~~~la~~l~v~~-~~v~~~v~G~hg~~~~vp~~s~~~v~~~~~~~~~~~i~~  246 (354)
                      ++++++++.+.|+++|++|+|.||..|.+.++++.++++| ++++++|+|+|.+.+++|++|+..+...+++++++.|+.
T Consensus       154 IaaevlKk~G~ydpkklfGVTtLDvVRA~tFv~~~~~~~p~~~v~VPVIGGHaG~TIlPLlSQ~~p~~~~~~~~~~~Lt~  233 (345)
T KOG1494|consen  154 IAAEVLKKAGVYDPKKLFGVTTLDVVRANTFVAEVLNLDPAEDVDVPVIGGHAGITIIPLLSQCKPPFRFTDDEIEALTH  233 (345)
T ss_pred             HHHHHHHHcCCCCccceeceehhhhhhHHHHHHHHhCCCchhcCCcceecCcCCceEeeecccCCCcccCCHHHHHHHHH
Confidence            9999999999999999999999999999999999999999 559999999998889999999999888899999999999


Q ss_pred             HHhcchhHHHhhhccCCcchhhHHHHHHHHHHHHHhccCCCCcEEEeeeeeccCCCccEEEEeEEEcCCCeEEeccCCCC
Q 018512          247 RIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQLGPL  326 (354)
Q Consensus       247 ~v~~~~~~i~~~~~~kg~~~~s~A~a~~~ii~si~~~~~~~~~v~~~~~~~g~~~~~~~~svPv~ig~~Gv~~i~~~~~L  326 (354)
                      +++..+.||.++|.|+|+..+|+|+|.++++.+++++.+++..+..|+|+....-+-.||+.|+++|++|++++..+++|
T Consensus       234 RiQ~gGtEVV~AKaGaGSATLSMAyAga~fa~s~lrgl~G~~~v~ecafV~s~~~~~~fFaspv~Lg~~Gv~~v~~l~~l  313 (345)
T KOG1494|consen  234 RIQNGGTEVVKAKAGAGSATLSMAYAGAKFADSLLRGLNGDEDVVECAFVASPVTELPFFATPVTLGKKGVEEVLGLGKL  313 (345)
T ss_pred             HHHhCCceEEEeccCCCchhhhHHHHHHHHHHHHHHHhCCCCCeEEEeEEeccccCccceeceEEecCCceeeecCCCcc
Confidence            99999999999999999999999999999999999999876678899998776546689999999999999999999999


Q ss_pred             CHHHHHHHHHHHHHHHHHHHHhhhhhc
Q 018512          327 NEYERIGLEKAKKELAGSIQKGISFSK  353 (354)
Q Consensus       327 ~~~E~~~l~~sa~~i~~~~~~~~~~~~  353 (354)
                      +++|++.|+.+..+|+..++++.+|++
T Consensus       314 sd~E~~~l~~~~~eLk~sI~KGv~F~~  340 (345)
T KOG1494|consen  314 SDYEEKALEAAKPELKKSIEKGVTFVK  340 (345)
T ss_pred             CHHHHHHHHHHHHHHHHHHHhhHHHHh
Confidence            999999999999999999999999875

>cd00300 LDH_like L-lactate dehydrogenase-like enzymes

Probab=100.00  E-value=2.6e-58  Score=438.25  Aligned_cols=286  Identities=29%  Similarity=0.423  Sum_probs=258.0

Q ss_pred             EEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCCC-CeEEEEeCCCcHHhhhCCCcEEEEcCCCC
Q 018512           45 VAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTG-AVVRGFLGQPQLENALTGMDLVIIPAGVP  121 (354)
Q Consensus        45 I~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~~-~~v~~~~~~~d~~~al~~aDvVIi~ag~~  121 (354)
                      |+|||+ |.||+++++.|+..++..+|+|+|+++  +.++++||.|+... ...+... ++| +++++|||+||+++|.|
T Consensus         1 i~iiGa-G~VG~~~a~~l~~~~~~~el~l~D~~~~~~~g~~~DL~~~~~~~~~~~i~~-~~~-~~~l~~aDiVIitag~p   77 (300)
T cd00300           1 ITIIGA-GNVGAAVAFALIAKGLASELVLVDVNEEKAKGDALDLSHASAFLATGTIVR-GGD-YADAADADIVVITAGAP   77 (300)
T ss_pred             CEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHhHHHhccccCCCeEEE-CCC-HHHhCCCCEEEEcCCCC
Confidence            689999 999999999999999988999999987  68999999998642 2223322 345 47899999999999999


Q ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCCchHHHHHHHHHhCCCCCCCEEEe-ccchHHHHHHHHH
Q 018512          122 RKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRANTFVA  200 (354)
Q Consensus       122 ~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~~~~~~~~~~p~~kviG~-t~ld~~r~~~~la  200 (354)
                      +++|++|.|++.+|+++++++++.|+++||++|+|++|||+|+++++    +++++|+|++||+|+ |.||+.|+++++|
T Consensus        78 ~~~~~~R~~l~~~n~~i~~~~~~~i~~~~p~~~viv~sNP~d~~~~~----~~~~sg~~~~kviG~gt~lDs~r~~~~la  153 (300)
T cd00300          78 RKPGETRLDLINRNAPILRSVITNLKKYGPDAIILVVSNPVDILTYV----AQKLSGLPKNRVIGSGTLLDSARFRSLLA  153 (300)
T ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEccChHHHHHHH----HHHHhCcCHHHEEecCCcHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999865    478889999999999 7999999999999


Q ss_pred             HHhCCCCCCCcceEEeecCCccccccccccCCCC-C------CChHHHHHHHHHHhcchhHHHhhhccCCcchhhHHHHH
Q 018512          201 EVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPC-S------FTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAA  273 (354)
Q Consensus       201 ~~l~v~~~~v~~~v~G~hg~~~~vp~~s~~~v~~-~------~~~~~~~~i~~~v~~~~~~i~~~~~~kg~~~~s~A~a~  273 (354)
                      +++|+++++|+++|+|+||+ +++|+||++++.+ +      .++..++++.+++++++++|++   +||+++|++|.++
T Consensus       154 ~~l~v~~~~v~~~viGeHg~-s~v~~~S~~~v~g~p~~~~~~~~~~~~~~l~~~v~~~~~~ii~---~kg~t~~~~a~a~  229 (300)
T cd00300         154 EKLDVDPQSVHAYVLGEHGD-SQVVAWSTATVGGLPLEELAPFTKLDLEAIEEEVRTSGYEIIR---LKGATNYGIATAI  229 (300)
T ss_pred             HHhCCCcccEEEEEEeccCC-ceeeeeeeeEECCEEHHHhhcccHHHHHHHHHHHHHHHHHHHH---ccCcchHHHHHHH
Confidence            99999999999999999999 9999999998753 1      1334578999999999999999   5789999999999


Q ss_pred             HHHHHHHHhccCCCCcEEEee-eeeccC-CCccEEEEeEEEcCCCeEEeccCCCCCHHHHHHHHHHHHHHHHHH
Q 018512          274 VKFADACLRGLRGDAGVVECA-FVASQV-TELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSI  345 (354)
Q Consensus       274 ~~ii~si~~~~~~~~~v~~~~-~~~g~~-~~~~~~svPv~ig~~Gv~~i~~~~~L~~~E~~~l~~sa~~i~~~~  345 (354)
                      ++++++|+++.+   .++|++ +++|+| ++++|||+||++|++|+++++++ +|+++|+++|++|+++|++.+
T Consensus       230 ~~~~~ai~~~~~---~v~~~s~~~~g~yg~~~~~~s~Pv~ig~~Gi~~i~~l-~L~~~E~~~l~~s~~~l~~~~  299 (300)
T cd00300         230 ADIVKSILLDER---RVLPVSAVQEGQYGIEDVALSVPAVVGREGVVRILEI-PLTEDEEAKLQKSAEALKEVL  299 (300)
T ss_pred             HHHHHHHHcCCC---eEEEEEEEecCccCCCCEEEEEEEEEeCCCeEEEecC-CCCHHHHHHHHHHHHHHHHHh
Confidence            999999999865   489998 579999 78999999999999999999995 999999999999999999765

Members of this subfamily are tetrameric NAD-dependent 2-hydroxycarboxylate dehydrogenases including LDHs, L-2-hydroxyisocaproate dehydrogenases (L-HicDH), and LDH-like malate dehydrogenases (MDH). Dehydrogenases catalyze the conversion of carbonyl compounds to alcohols or amino acids. LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. L-HicDH catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of prot

>TIGR01763 MalateDH_bact malate dehydrogenase, NAD-dependent

Probab=100.00  E-value=7.8e-58  Score=435.45  Aligned_cols=289  Identities=31%  Similarity=0.510  Sum_probs=259.5

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCCC----CeEEEEeCCCcHHhhhCCCcEEEE
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTG----AVVRGFLGQPQLENALTGMDLVII  116 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~~----~~v~~~~~~~d~~~al~~aDvVIi  116 (354)
                      |||+|||+ |.||+.+|+.++..++. +|+|+|+++  ..+.++|+.|....    ..++   .++|+ +++++||+||+
T Consensus         2 ~KV~VIGa-G~vG~~iA~~la~~g~~-~VvlvDi~~~l~~g~a~d~~~~~~~~~~~~~i~---~t~d~-~~~~~aDiVIi   75 (305)
T TIGR01763         2 KKISVIGA-GFVGATTAFRLAEKELA-DLVLLDVVEGIPQGKALDMYEASPVGGFDTKVT---GTNNY-ADTANSDIVVI   75 (305)
T ss_pred             CEEEEECc-CHHHHHHHHHHHHcCCC-eEEEEeCCCChhHHHHHhhhhhhhccCCCcEEE---ecCCH-HHhCCCCEEEE
Confidence            69999999 99999999999998887 799999987  56777888775421    2233   24676 45999999999


Q ss_pred             cCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCCchHHHHHHHHHhCCCCCCCEEEe-ccchHHHH
Q 018512          117 PAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRA  195 (354)
Q Consensus       117 ~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~~~~~~~~~~p~~kviG~-t~ld~~r~  195 (354)
                      ++|.|+++|++|.|++..|++++++++++|.+++|++++|++|||+|++++++    ++.+|+|++||||+ |.||+.|+
T Consensus        76 tag~p~~~~~sR~~l~~~N~~iv~~i~~~I~~~~p~~~iIv~tNP~di~t~~~----~~~sg~~~~rviG~g~~lds~R~  151 (305)
T TIGR01763        76 TAGLPRKPGMSREDLLSMNAGIVREVTGRIMEHSPNPIIVVVSNPLDAMTYVA----WQKSGFPKERVIGQAGVLDSARF  151 (305)
T ss_pred             cCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCcHHHHHHHH----HHHHCcCHHHEEEeccchHHHHH
Confidence            99999999999999999999999999999999999999999999999998654    78899999999999 58999999


Q ss_pred             HHHHHHHhCCCCCCCcceEEeecCCccccccccccCCCC-C----CChHHHHHHHHHHhcchhHHHhhhccCCcchhhHH
Q 018512          196 NTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPC-S----FTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMA  270 (354)
Q Consensus       196 ~~~la~~l~v~~~~v~~~v~G~hg~~~~vp~~s~~~v~~-~----~~~~~~~~i~~~v~~~~~~i~~~~~~kg~~~~s~A  270 (354)
                      ++.+|+++++++++|+++||||||+ +++|+||.+++.+ +    ++++.++++.+++++++++|++.+ |||+++|++|
T Consensus       152 ~~~la~~l~v~~~~v~~~v~GeHg~-s~~~~wS~~~i~g~~~~~~~~~~~~~~l~~~v~~~g~~ii~~~-~kg~t~~~~a  229 (305)
T TIGR01763       152 RTFIAMELGVSVQDVTACVLGGHGD-AMVPLVRYSTVAGIPVADLISAERIAEIVERTRKGGGEIVNLL-KQGSAYYAPA  229 (305)
T ss_pred             HHHHHHHhCcCHHHeeeeEEecCCC-cEEeeeeeeEECCEEHHHhcCHHHHHHHHHHHHHHHHHHHHhc-CCCChHHHHH
Confidence            9999999999999999999999999 9999999998753 2    345558999999999999999975 6899999999


Q ss_pred             HHHHHHHHHHHhccCCCCcEEEee-eeeccC-CCccEEEEeEEEcCCCeEEeccCCCCCHHHHHHHHHHHHHHHHHHHH
Q 018512          271 YAAVKFADACLRGLRGDAGVVECA-FVASQV-TELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSIQK  347 (354)
Q Consensus       271 ~a~~~ii~si~~~~~~~~~v~~~~-~~~g~~-~~~~~~svPv~ig~~Gv~~i~~~~~L~~~E~~~l~~sa~~i~~~~~~  347 (354)
                      .++++++++|++|++   .++|++ +++|+| .+++|+|+||+||++|+++++++ +|+++|+++|++|++.|++.++.
T Consensus       230 ~~~~~i~~ai~~~~~---~v~~~s~~~~~~yg~~~v~~s~P~~ig~~Gv~~i~~~-~l~~~E~~~l~~s~~~i~~~~~~  304 (305)
T TIGR01763       230 ASVVEMVEAILKDRK---RVLPCAAYLDGQYGIDGIYVGVPVILGKNGVEHIYEL-KLDQSELALLNKSAKIVDENCKM  304 (305)
T ss_pred             HHHHHHHHHHhCCCC---eEEEEEEEecccCCCCceEEEEEEEEeCCeEEEEeCC-CCCHHHHHHHHHHHHHHHHHHhc
Confidence            999999999999975   489998 679999 68999999999999999999996 99999999999999999988753

The annotation of Botryococcus braunii as lactate dehydrogenase appears top be in error. This was initially annotated as MDH by Swiss-Prot and then changed. The rationale for either of these annotations is not traceable.

>cd05292 LDH_2 A subgroup of L-lactate dehydrogenases

Probab=100.00  E-value=1.5e-56  Score=427.59  Aligned_cols=288  Identities=28%  Similarity=0.447  Sum_probs=260.3

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCC-CCeEEEEeCCCcHHhhhCCCcEEEEcCC
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDT-GAVVRGFLGQPQLENALTGMDLVIIPAG  119 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~-~~~v~~~~~~~d~~~al~~aDvVIi~ag  119 (354)
                      |||+|||+ |.||+++++.|+..++..+|+|+|+++  +.+.++|+.|... .......  ++++ +++++||+||++++
T Consensus         1 mkI~IIGa-G~VG~~~a~~l~~~g~~~ev~l~D~~~~~~~g~a~dl~~~~~~~~~~~i~--~~d~-~~l~~aDiViita~   76 (308)
T cd05292           1 MKVAIVGA-GFVGSTTAYALLLRGLASEIVLVDINKAKAEGEAMDLAHGTPFVKPVRIY--AGDY-ADCKGADVVVITAG   76 (308)
T ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCCEEEEEECCchhhhhHHHHHHccccccCCeEEe--eCCH-HHhCCCCEEEEccC
Confidence            69999999 999999999999999888999999987  6789999998753 1223332  3565 78999999999999


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCCchHHHHHHHHHhCCCCCCCEEEe-ccchHHHHHHH
Q 018512          120 VPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRANTF  198 (354)
Q Consensus       120 ~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~~~~~~~~~~p~~kviG~-t~ld~~r~~~~  198 (354)
                      .++++|++|.|++..|+++++++++.+++++|+++++++|||+|++++++    ++.+|||++||||+ |.||+.|++++
T Consensus        77 ~~~~~~~~r~dl~~~n~~i~~~~~~~l~~~~~~giiiv~tNP~d~~~~~~----~~~sg~p~~~viG~gt~LDs~R~~~~  152 (308)
T cd05292          77 ANQKPGETRLDLLKRNVAIFKEIIPQILKYAPDAILLVVTNPVDVLTYVA----YKLSGLPPNRVIGSGTVLDTARFRYL  152 (308)
T ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCcHHHHHHHH----HHHHCcCHHHeecccchhhHHHHHHH
Confidence            99999999999999999999999999999999999999999999998764    78889999999999 89999999999


Q ss_pred             HHHHhCCCCCCCcceEEeecCCccccccccccCCCC------------CCChHHHHHHHHHHhcchhHHHhhhccCCcch
Q 018512          199 VAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPC------------SFTQEETEYLTNRIQNGGTEVVEAKAGAGSAT  266 (354)
Q Consensus       199 la~~l~v~~~~v~~~v~G~hg~~~~vp~~s~~~v~~------------~~~~~~~~~i~~~v~~~~~~i~~~~~~kg~~~  266 (354)
                      +|+++++++++|+++|||+||+ +++|+||++++.+            .+++++++++.+++++++++|++   +||+++
T Consensus       153 la~~~~v~~~~v~~~viGeHg~-~~~~~~S~~~v~g~~~~~~~~~~~~~~~~~~~~~l~~~v~~~g~~ii~---~kg~t~  228 (308)
T cd05292         153 LGEHLGVDPRSVHAYIIGEHGD-SEVAVWSSANIGGVPLDEFCKLCGRPFDEEVREEIFEEVRNAAYEIIE---RKGATY  228 (308)
T ss_pred             HHHHhCCCccceeceeeccCCC-cEEecceeeeECCEEHHHHhhhcccccCHHHHHHHHHHHHHHHHHHHH---cCCccH
Confidence            9999999999999999999999 9999999998642            23345688999999999999999   468999


Q ss_pred             hhHHHHHHHHHHHHHhccCCCCcEEEee-eeeccC-CCccEEEEeEEEcCCCeEEeccCCCCCHHHHHHHHHHHHHHHHH
Q 018512          267 LSMAYAAVKFADACLRGLRGDAGVVECA-FVASQV-TELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGS  344 (354)
Q Consensus       267 ~s~A~a~~~ii~si~~~~~~~~~v~~~~-~~~g~~-~~~~~~svPv~ig~~Gv~~i~~~~~L~~~E~~~l~~sa~~i~~~  344 (354)
                      |++|.++++++++|++|.+   .++|++ +++|+| .+++|+|+||+||++|+++++++ +||++|+++|++|++.|++.
T Consensus       229 ~~~a~a~~~i~~ail~~~~---~v~~~s~~~~g~yg~~~~~~s~P~~ig~~Gv~~i~~~-~L~~~E~~~l~~s~~~i~~~  304 (308)
T cd05292         229 YAIGLALARIVEAILRDEN---SVLTVSSLLDGQYGIKDVALSLPCIVGRSGVERVLPP-PLSEEEEEALRASAEVLKEA  304 (308)
T ss_pred             HHHHHHHHHHHHHHHcCCC---cEEEEEEEEcccCCCCCEEEEEEEEEeCCceEEecCC-CCCHHHHHHHHHHHHHHHHH
Confidence            9999999999999999865   489997 679999 57999999999999999999995 99999999999999999988


Q ss_pred             HH
Q 018512          345 IQ  346 (354)
Q Consensus       345 ~~  346 (354)
                      ++
T Consensus       305 ~~  306 (308)
T cd05292         305 IE  306 (308)
T ss_pred             Hh
Confidence            76

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed predominantly of bacterial LDHs and a few fungal LDHs. Bacterial LDHs may be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent

Probab=100.00  E-value=1.4e-56  Score=429.17  Aligned_cols=296  Identities=24%  Similarity=0.321  Sum_probs=254.7

Q ss_pred             eEEEEcCCCchHHHHHHHHHhCCCCc-----EEEEEecCC----chhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEE
Q 018512           44 KVAILGAAGGIGQPLAMLMKINPLVS-----VLHLYDVVN----TPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLV  114 (354)
Q Consensus        44 kI~IiGa~G~vG~~~a~~l~~~~~~~-----ei~L~D~~~----~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvV  114 (354)
                      ||+||||+|+||+++++.|+..+++.     +|+|+|+++    ++++++||.|+.... ...+..+++.+++++|||+|
T Consensus         1 ~V~IiGaaG~VG~~~a~~l~~~~~~~~~~e~el~LiD~~~~~~~a~g~~~Dl~d~~~~~-~~~~~~~~~~~~~~~~aDiV   79 (324)
T TIGR01758         1 RVVVTGAAGQIGYALLPMIARGRMLGKDQPIILHLLDIPPAMKVLEGVVMELMDCAFPL-LDGVVPTHDPAVAFTDVDVA   79 (324)
T ss_pred             CEEEECCCcHHHHHHHHHHHhccccCCCCccEEEEEecCCcccccceeEeehhcccchh-cCceeccCChHHHhCCCCEE
Confidence            69999999999999999999888765     799999954    578999999986311 11122233446899999999


Q ss_pred             EEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecCCCCCchHHHHHHHHHhCCCCCCCEEEe-ccchH
Q 018512          115 IIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDV  192 (354)
Q Consensus       115 Ii~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~-p~a~viv~tNPv~~~~~~~~~~~~~~~~~p~~kviG~-t~ld~  192 (354)
                      |++||.|+++|++|.+++..|++++++++++|.+++ |++++|++|||+|++|+++    ++.+++++.++||+ |.||+
T Consensus        80 VitAG~~~~~~~tr~~ll~~N~~i~k~i~~~i~~~~~~~~iiivvsNPvDv~t~v~----~~~sg~~~~~vig~gt~LDs  155 (324)
T TIGR01758        80 ILVGAFPRKEGMERRDLLSKNVKIFKEQGRALDKLAKKDCKVLVVGNPANTNALVL----SNYAPSIPPKNFSALTRLDH  155 (324)
T ss_pred             EEcCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEeCCcHHHHHHHH----HHHcCCCCcceEEEeeehHH
Confidence            999999999999999999999999999999999996 9999999999999998765    77887777789999 89999


Q ss_pred             HHHHHHHHHHhCCCCCCCc-ceEEeecCCccccccccccCCC-C----C----CChHH--HHHHHHHHhcchhHHHhhhc
Q 018512          193 VRANTFVAEVLGLDPRDVD-VPVVGGHAGVTILPLLSQVKPP-C----S----FTQEE--TEYLTNRIQNGGTEVVEAKA  260 (354)
Q Consensus       193 ~r~~~~la~~l~v~~~~v~-~~v~G~hg~~~~vp~~s~~~v~-~----~----~~~~~--~~~i~~~v~~~~~~i~~~~~  260 (354)
                      +||++++|+++|+++++|+ ++||||||+ +++|+||++++. +    +    ++++.  +++|.+++++++++|++.+ 
T Consensus       156 ~R~r~~la~~l~v~~~~V~~~~V~GeHG~-s~v~~~S~~~v~~g~~~~pl~~~~~~~~~~~~~i~~~v~~~g~~Ii~~k-  233 (324)
T TIGR01758       156 NRALAQVAERAGVPVSDVKNVIIWGNHSS-TQYPDVNHATVTKGGKQKPVREAIKDDAYLDGEFITTVQQRGAAIIRAR-  233 (324)
T ss_pred             HHHHHHHHHHhCCChhhceEeEEEECCCC-CcccccccceecCCCCccCHHHHhcchhhHHHHHHHHHHhCHHHHHhcc-
Confidence            9999999999999999995 699999999 999999999886 3    2    22222  5789999999999999963 


Q ss_pred             cCCcchhhHHHHHHHHHHHHHhccCCCCcEEEee-eeecc-C--CCccEEEEeEEEcCCCeEEeccCCCCCHHHHHHHHH
Q 018512          261 GAGSATLSMAYAAVKFADACLRGLRGDAGVVECA-FVASQ-V--TELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEK  336 (354)
Q Consensus       261 ~kg~~~~s~A~a~~~ii~si~~~~~~~~~v~~~~-~~~g~-~--~~~~~~svPv~ig~~Gv~~i~~~~~L~~~E~~~l~~  336 (354)
                       ++++.|++|.++++++++|+++... +.++|++ +++|+ |  |+++|||+||++|++|++.+.++ +|+++|+++|++
T Consensus       234 -~~~t~~~ia~~~~~i~~ai~~~~~~-~~i~~vs~~~~g~~yg~~~~v~~s~P~~ig~g~~~~i~el-~L~~~E~~~l~~  310 (324)
T TIGR01758       234 -KLSSALSAAKAAVDQMHDWVLGTPE-GTFVSMGVYSDGSPYGVPKGLIFSFPVTCKNGEWKIVEGL-CVDDSSRKKLAL  310 (324)
T ss_pred             -CCCHHHHHHHHHHHHHHHHhcCCCC-CeEEEEEeecCCcccCCCCceEEEEEEEEcCCeEEEecCC-CCCHHHHHHHHH
Confidence             4689999999999999999954332 2599998 67999 8  48999999999996666666665 999999999999


Q ss_pred             HHHHHHHHHHHhh
Q 018512          337 AKKELAGSIQKGI  349 (354)
Q Consensus       337 sa~~i~~~~~~~~  349 (354)
                      |++.|++.++.++
T Consensus       311 s~~~lk~~~~~~~  323 (324)
T TIGR01758       311 TAKELEEERDEAL  323 (324)
T ss_pred             HHHHHHHHHHHhh
Confidence            9999999998875

This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography

>cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases

Probab=100.00  E-value=1.5e-56  Score=429.75  Aligned_cols=296  Identities=24%  Similarity=0.330  Sum_probs=258.6

Q ss_pred             CCCeEEEEcCCCchHHHHHHHHHhCCCCc-----EEEEEecCC----chhHHHHHhcCCC--CCeEEEEeCCCcHHhhhC
Q 018512           41 AGFKVAILGAAGGIGQPLAMLMKINPLVS-----VLHLYDVVN----TPGVTADISHMDT--GAVVRGFLGQPQLENALT  109 (354)
Q Consensus        41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~-----ei~L~D~~~----~~g~~~dl~~~~~--~~~v~~~~~~~d~~~al~  109 (354)
                      +|.||+||||+|+||+++++.|+..++.+     +|+|+|+++    +.++++|+.|+..  ...+..   +.+++++++
T Consensus         1 ~~~kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~~~~~~~g~~~Dl~d~~~~~~~~~~~---~~~~~~~l~   77 (325)
T cd01336           1 EPIRVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPALKALEGVVMELQDCAFPLLKSVVA---TTDPEEAFK   77 (325)
T ss_pred             CCeEEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCCccccccceeeehhhccccccCCcee---cCCHHHHhC
Confidence            46799999999999999999999888764     999999954    5778889999752  122322   356779999


Q ss_pred             CCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecCCCCCchHHHHHHHHHh-CCCCCCCEEEe
Q 018512          110 GMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNSTVPIAAEVFKKA-GTYDPKKLLGV  187 (354)
Q Consensus       110 ~aDvVIi~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~-p~a~viv~tNPv~~~~~~~~~~~~~~-~~~p~~kviG~  187 (354)
                      |||+||++||.+++++++|.+++..|+++++++++.|++++ |++++|++|||+|++++++    ++. +++|+++ ||+
T Consensus        78 ~aDiVI~tAG~~~~~~~~R~~l~~~N~~i~~~i~~~i~~~~~~~~iiivvsNPvD~~t~~~----~k~~~~~~~~~-ig~  152 (325)
T cd01336          78 DVDVAILVGAMPRKEGMERKDLLKANVKIFKEQGEALDKYAKKNVKVLVVGNPANTNALIL----LKYAPSIPKEN-FTA  152 (325)
T ss_pred             CCCEEEEeCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEecCcHHHHHHHH----HHHcCCCCHHH-EEe
Confidence            99999999999999999999999999999999999999997 7999999999999998765    666 5788777 888


Q ss_pred             -ccchHHHHHHHHHHHhCCCCCCCc-ceEEeecCCccccccccccCCC----C-C----CChHH--HHHHHHHHhcchhH
Q 018512          188 -TMLDVVRANTFVAEVLGLDPRDVD-VPVVGGHAGVTILPLLSQVKPP----C-S----FTQEE--TEYLTNRIQNGGTE  254 (354)
Q Consensus       188 -t~ld~~r~~~~la~~l~v~~~~v~-~~v~G~hg~~~~vp~~s~~~v~----~-~----~~~~~--~~~i~~~v~~~~~~  254 (354)
                       |.||+.||++++|+++++++++|+ .+||||||+ +++|+||++++.    . +    +++++  +++|.+++++++++
T Consensus       153 gt~LDs~R~r~~la~~l~v~~~~v~~~~V~GeHG~-s~~~~~S~~~v~~~~~g~~~~~~~~~~~~~~~~i~~~v~~~g~~  231 (325)
T cd01336         153 LTRLDHNRAKSQIALKLGVPVSDVKNVIIWGNHSS-TQYPDVNHATVELNGKGKPAREAVKDDAWLNGEFISTVQKRGAA  231 (325)
T ss_pred             eehHHHHHHHHHHHHHhCcChhhceEeEEEEcCCC-CeeeccccceeecCCCCccHHHHhcccchhHHHHHHHHHhhHHH
Confidence             999999999999999999999996 569999999 999999999885    3 2    22222  58899999999999


Q ss_pred             HHhhhccCCcchhhHHHHHHHHHHHHHhccCCCCcEEEee-eeeccC--CCccEEEEeEEEcCCCeEEeccCCCCCHHHH
Q 018512          255 VVEAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECA-FVASQV--TELPFFASKVRLGRQGAEEIFQLGPLNEYER  331 (354)
Q Consensus       255 i~~~~~~kg~~~~s~A~a~~~ii~si~~~~~~~~~v~~~~-~~~g~~--~~~~~~svPv~ig~~Gv~~i~~~~~L~~~E~  331 (354)
                      |++.+  +|++.||+|.++++++++|++|.+. +.++|++ +++|+|  ++++|||+||+||++|+.++.++ +|+++|+
T Consensus       232 Ii~~~--~g~t~~~~a~~~~~i~~ail~~~~~-~~v~~vs~~~~g~yg~~~~v~~s~P~~ig~~Gv~~i~~~-~L~~~E~  307 (325)
T cd01336         232 VIKAR--KLSSAMSAAKAICDHVHDWWFGTPE-GEFVSMGVYSDGSYGVPEGLIFSFPVTCKNGKWKIVQGL-SIDDFSR  307 (325)
T ss_pred             HHHcc--ccchHHHHHHHHHHHHHHHHcCCCC-CeEEEEEEecCCCcCCCCceEEEEEEEEeCCEEEEecCC-CCCHHHH
Confidence            99963  6799999999999999999998532 2599998 579999  48999999999999999999996 9999999


Q ss_pred             HHHHHHHHHHHHHHHHhh
Q 018512          332 IGLEKAKKELAGSIQKGI  349 (354)
Q Consensus       332 ~~l~~sa~~i~~~~~~~~  349 (354)
                      ++|++|++.|+++++.++
T Consensus       308 ~~l~~s~~~l~~e~~~~~  325 (325)
T cd01336         308 EKIDATAKELVEEKETAL  325 (325)
T ss_pred             HHHHHHHHHHHHHHHhhC
Confidence            999999999999998764

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>cd01339 LDH-like_MDH L-lactate dehydrogenase-like malate dehydrogenase proteins

Probab=100.00  E-value=1.3e-54  Score=413.27  Aligned_cols=287  Identities=34%  Similarity=0.568  Sum_probs=256.3

Q ss_pred             EEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCCC--CeEEEEeCCCcHHhhhCCCcEEEEcCCC
Q 018512           45 VAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTG--AVVRGFLGQPQLENALTGMDLVIIPAGV  120 (354)
Q Consensus        45 I~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~~--~~v~~~~~~~d~~~al~~aDvVIi~ag~  120 (354)
                      |+|||| |+||+.++..++..++. +|+|+|+++  +.+..+|+.+....  ...+.. .++|+ ++++|||+||+++|.
T Consensus         1 I~IIGa-G~vG~~ia~~la~~~l~-eV~L~Di~e~~~~g~~~dl~~~~~~~~~~~~I~-~t~d~-~~l~dADiVIit~g~   76 (300)
T cd01339           1 ISIIGA-GNVGATLAQLLALKELG-DVVLLDIVEGLPQGKALDISQAAPILGSDTKVT-GTNDY-EDIAGSDVVVITAGI   76 (300)
T ss_pred             CEEECC-CHHHHHHHHHHHhCCCc-EEEEEeCCCcHHHHHHHHHHHhhhhcCCCeEEE-EcCCH-HHhCCCCEEEEecCC
Confidence            689999 99999999999998887 999999987  56777888876421  122322 24564 679999999999999


Q ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCCchHHHHHHHHHhCCCCCCCEEEec-cchHHHHHHHH
Q 018512          121 PRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVT-MLDVVRANTFV  199 (354)
Q Consensus       121 ~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~~~~~~~~~~p~~kviG~t-~ld~~r~~~~l  199 (354)
                      |+++|++|.|.+.+|++++++++++|++++|++++|++|||+|++++++    ++++++|++||+|+| .||+.|+++.+
T Consensus        77 p~~~~~~r~e~~~~n~~i~~~i~~~i~~~~p~~~iIv~sNP~di~t~~~----~~~s~~~~~rviGlgt~lds~r~~~~l  152 (300)
T cd01339          77 PRKPGMSRDDLLGTNAKIVKEVAENIKKYAPNAIVIVVTNPLDVMTYVA----YKASGFPRNRVIGMAGVLDSARFRYFI  152 (300)
T ss_pred             CCCcCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCcHHHHHHHH----HHHhCCCHHHEEEecchHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999999998764    788899999999995 89999999999


Q ss_pred             HHHhCCCCCCCcceEEeecCCccccccccccCCCC-C----CChHHHHHHHHHHhcchhHHHhhhccCCcchhhHHHHHH
Q 018512          200 AEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPC-S----FTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAV  274 (354)
Q Consensus       200 a~~l~v~~~~v~~~v~G~hg~~~~vp~~s~~~v~~-~----~~~~~~~~i~~~v~~~~~~i~~~~~~kg~~~~s~A~a~~  274 (354)
                      |+++++++++|+++++|+||+ +++|+||++++.+ +    +++++++++.+++++++++|++.| |||++.|++|.+++
T Consensus       153 a~~l~v~~~~v~~~v~G~hg~-~~~~~~s~~~v~g~~~~~~~~~~~~~~~~~~v~~~~~~ii~~k-~~g~t~~~~a~~~~  230 (300)
T cd01339         153 AEELGVSVKDVQAMVLGGHGD-TMVPLPRYSTVGGIPLTELITKEEIDEIVERTRNGGAEIVNLL-KTGSAYYAPAAAIA  230 (300)
T ss_pred             HHHhCCCccceEEEEEeCCCC-cceecceecEECCEEHHHhcChHHHHHHHHHHHHHHHHHHhhc-CCCchhHHHHHHHH
Confidence            999999999999999999999 9999999999853 2    345568999999999999999976 67999999999999


Q ss_pred             HHHHHHHhccCCCCcEEEee-eeeccC-CCccEEEEeEEEcCCCeEEeccCCCCCHHHHHHHHHHHHHHHHHH
Q 018512          275 KFADACLRGLRGDAGVVECA-FVASQV-TELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSI  345 (354)
Q Consensus       275 ~ii~si~~~~~~~~~v~~~~-~~~g~~-~~~~~~svPv~ig~~Gv~~i~~~~~L~~~E~~~l~~sa~~i~~~~  345 (354)
                      +++++|++|++   .++|++ +++|+| .+++|||+||+||++|+++++++ +|+++|+++|++|++.|++.+
T Consensus       231 ~i~~ail~~~~---~i~~~s~~~~g~yg~~~~~~s~P~~ig~~G~~~~~~l-~l~~~E~~~l~~s~~~l~~~~  299 (300)
T cd01339         231 EMVEAILKDKK---RVLPCSAYLEGEYGIKDIFVGVPVVLGKNGVEKIIEL-DLTDEEKEAFDKSVESVKELI  299 (300)
T ss_pred             HHHHHHHcCCC---cEEEEEEEeccccCCCCeEEEEEEEEeCCeEEEEeCC-CCCHHHHHHHHHHHHHHHHHh
Confidence            99999999865   489998 679999 56999999999999999999996 999999999999999999865

Members of this subfamily have an LDH-like structure and an MDH enzymatic activity. Some members, like MJ0490 from Methanococcus jannaschii, exhibit both MDH and LDH activities. Tetrameric MDHs, including those from phototrophic bacteria, are more similar to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenas

>PRK06223 malate dehydrogenase; Reviewed

Probab=100.00  E-value=3.2e-54  Score=411.92  Aligned_cols=292  Identities=32%  Similarity=0.565  Sum_probs=260.2

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCCC--CeEEEEeCCCcHHhhhCCCcEEEEc
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTG--AVVRGFLGQPQLENALTGMDLVIIP  117 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~~--~~v~~~~~~~d~~~al~~aDvVIi~  117 (354)
                      ++||+|||| |+||++++..++..++. +|+|+|+++  +++.++|+.|....  ...+. ..++|+ +++++||+||++
T Consensus         2 ~~KI~VIGa-G~vG~~ia~~la~~~~~-ev~L~D~~~~~~~~~~~dl~~~~~~~~~~~~i-~~~~d~-~~~~~aDiVii~   77 (307)
T PRK06223          2 RKKISIIGA-GNVGATLAHLLALKELG-DVVLFDIVEGVPQGKALDIAEAAPVEGFDTKI-TGTNDY-EDIAGSDVVVIT   77 (307)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCe-EEEEEECCCchhHHHHHHHHhhhhhcCCCcEE-EeCCCH-HHHCCCCEEEEC
Confidence            479999999 99999999999998877 999999987  57888888876421  11222 234576 679999999999


Q ss_pred             CCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCCchHHHHHHHHHhCCCCCCCEEEe-ccchHHHHH
Q 018512          118 AGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRAN  196 (354)
Q Consensus       118 ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~~~~~~~~~~p~~kviG~-t~ld~~r~~  196 (354)
                      +|.|+++|++|.|.+.+|++++++++++|++++|++|+|++|||+|++|+++    ++++++|++||||+ |.||+.|++
T Consensus        78 ~~~p~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~viv~tNP~d~~~~~~----~~~s~~~~~~viG~gt~lds~r~~  153 (307)
T PRK06223         78 AGVPRKPGMSRDDLLGINAKIMKDVAEGIKKYAPDAIVIVVTNPVDAMTYVA----LKESGFPKNRVIGMAGVLDSARFR  153 (307)
T ss_pred             CCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCcHHHHHHHH----HHHhCCCcccEEEeCCCcHHHHHH
Confidence            9999999999999999999999999999999999999999999999998764    68889999999999 599999999


Q ss_pred             HHHHHHhCCCCCCCcceEEeecCCccccccccccCCCC-C----CChHHHHHHHHHHhcchhHHHhhhccCCcchhhHHH
Q 018512          197 TFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPC-S----FTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAY  271 (354)
Q Consensus       197 ~~la~~l~v~~~~v~~~v~G~hg~~~~vp~~s~~~v~~-~----~~~~~~~~i~~~v~~~~~~i~~~~~~kg~~~~s~A~  271 (354)
                      +.||+++++++++|+++++|+||+ +++|+||++++.+ +    ++++.+++|.++++++++++++.+ +|+++.|++|.
T Consensus       154 ~~la~~l~v~~~~v~~~viGehg~-s~~p~~S~~~v~g~~~~~~~~~~~~~~l~~~v~~~~~~ii~~~-~kg~t~~~~A~  231 (307)
T PRK06223        154 TFIAEELNVSVKDVTAFVLGGHGD-SMVPLVRYSTVGGIPLEDLLSKEKLDEIVERTRKGGAEIVGLL-KTGSAYYAPAA  231 (307)
T ss_pred             HHHHHHhCcChhhCcccEEcCCCC-cceEchhhCEECCEEHHHhCChHHHHHHHHHHHHHHHHHHhhc-ccCChhHHHHH
Confidence            999999999999999999999999 9999999998742 2    455557899999999999999964 57899999999


Q ss_pred             HHHHHHHHHHhccCCCCcEEEee-eeeccC-CCccEEEEeEEEcCCCeEEeccCCCCCHHHHHHHHHHHHHHHHHHHH
Q 018512          272 AAVKFADACLRGLRGDAGVVECA-FVASQV-TELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSIQK  347 (354)
Q Consensus       272 a~~~ii~si~~~~~~~~~v~~~~-~~~g~~-~~~~~~svPv~ig~~Gv~~i~~~~~L~~~E~~~l~~sa~~i~~~~~~  347 (354)
                      ++++++++|+.|.+   .++|++ +++|+| .++++||+||+||++|+++++++ +|+++|+++|++|+++|++.++.
T Consensus       232 ~~~~ii~ail~~~~---~~~~~~v~~~g~yg~~~~~~s~P~~i~~~Gv~~i~~~-~l~~~e~~~l~~s~~~l~~~~~~  305 (307)
T PRK06223        232 SIAEMVEAILKDKK---RVLPCSAYLEGEYGVKDVYVGVPVKLGKNGVEKIIEL-ELDDEEKAAFDKSVEAVKKLIEA  305 (307)
T ss_pred             HHHHHHHHHHcCCC---cEEEEEEEecCcCCCCCeEEEeEEEEeCCeEEEEeCC-CCCHHHHHHHHHHHHHHHHHHHh
Confidence            99999999999865   488887 678998 68999999999999999999995 99999999999999999988874

>cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity

Probab=100.00  E-value=2.4e-54  Score=412.36  Aligned_cols=290  Identities=26%  Similarity=0.437  Sum_probs=257.3

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC----chhHHHHHhcCCC--CCeEEEEeCCCcHHhhhCCCcEEEE
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN----TPGVTADISHMDT--GAVVRGFLGQPQLENALTGMDLVII  116 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~----~~g~~~dl~~~~~--~~~v~~~~~~~d~~~al~~aDvVIi  116 (354)
                      |||+|+||+|.+|++++..|+..++..+|+|+|+++    +++..+|+.|...  ....+.. .++|+ +++++||+||+
T Consensus         1 ~kI~IiGatG~vG~~~a~~l~~~g~~~~v~lvd~~~~~~~l~~~~~dl~d~~~~~~~~~~i~-~~~d~-~~l~~aDiVii   78 (309)
T cd05294           1 MKVSIIGASGRVGSATALLLAKEDVVKEINLISRPKSLEKLKGLRLDIYDALAAAGIDAEIK-ISSDL-SDVAGSDIVII   78 (309)
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEECcccccccccccchhhhchhccCCCcEEE-ECCCH-HHhCCCCEEEE
Confidence            799999988999999999999999988999999954    5778899988632  1122322 23464 67999999999


Q ss_pred             cCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCCchHHHHHHHHHhCCCCCCCEEEe-ccchHHHH
Q 018512          117 PAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRA  195 (354)
Q Consensus       117 ~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~~~~~~~~~~p~~kviG~-t~ld~~r~  195 (354)
                      ++|.|+++|++|.|++..|+++++++++.|.+++|+++||+++||+|++|+++    ++.+++|++|+||+ |.||+.|+
T Consensus        79 tag~p~~~~~~r~dl~~~n~~i~~~~~~~i~~~~~~~~viv~~npvd~~t~~~----~~~~g~~~~~viG~gt~LDs~R~  154 (309)
T cd05294          79 TAGVPRKEGMSRLDLAKKNAKIVKKYAKQIAEFAPDTKILVVTNPVDVMTYKA----LKESGFDKNRVFGLGTHLDSLRF  154 (309)
T ss_pred             ecCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCCchHHHHHHH----HHhcCCCHHHEeeccchHHHHHH
Confidence            99999999999999999999999999999999999999999999999998764    78889999999999 79999999


Q ss_pred             HHHHHHHhCCCCCCCcceEEeecCCccccccccccCCCC-C------CChHHHHHHHHHHhcchhHHHhhhccCCcchhh
Q 018512          196 NTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPC-S------FTQEETEYLTNRIQNGGTEVVEAKAGAGSATLS  268 (354)
Q Consensus       196 ~~~la~~l~v~~~~v~~~v~G~hg~~~~vp~~s~~~v~~-~------~~~~~~~~i~~~v~~~~~~i~~~~~~kg~~~~s  268 (354)
                      +++||+++++++++|+++|+||||+ +++|+||++++.+ +      +.+.+++++.+++++++++|++.   ||++.||
T Consensus       155 ~~~la~~l~v~~~~v~~~viGeHg~-s~~~~~S~~~i~g~~~~~~~~~~~~~~~~i~~~v~~~g~~i~~~---kg~t~~~  230 (309)
T cd05294         155 KVAIAKHFNVHISEVHTRIIGEHGD-SMVPLISSTSIGGIPIKRFPEYKDFDVEKIVETVKNAGQNIISL---KGGSEYG  230 (309)
T ss_pred             HHHHHHHHCcChHHeEEEEEecCCC-ceEeeeeecEECCEEHHHhhcccHHHHHHHHHHHHHHHHHHHHh---cCCchhh
Confidence            9999999999999999999999999 9999999998743 1      22445789999999999999994   6789999


Q ss_pred             HHHHHHHHHHHHHhccCCCCcEEEee-eeeccC--CCccEEEEeEEEcCCCeEEeccCCCCCHHHHHHHHHHHHHHHHHH
Q 018512          269 MAYAAVKFADACLRGLRGDAGVVECA-FVASQV--TELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSI  345 (354)
Q Consensus       269 ~A~a~~~ii~si~~~~~~~~~v~~~~-~~~g~~--~~~~~~svPv~ig~~Gv~~i~~~~~L~~~E~~~l~~sa~~i~~~~  345 (354)
                      +|.++++++++|++|++   .++|++ +++|+|  .+++++|+||+||++|+++++++ +|+++|+++|++|++.|++.+
T Consensus       231 ~a~~~~~ii~ail~~~~---~v~~vsv~~~g~~~~~~~~~~svP~~ig~~Gv~~i~~l-~l~~~E~~~l~~s~~~i~~~~  306 (309)
T cd05294         231 PASAISNLVRTIANDER---RILTVSTYLEGEIDGIRDVCIGVPVKLGKNGIEEIVPI-EMDDDEREAFRKSAEIVKKYT  306 (309)
T ss_pred             HHHHHHHHHHHHHCCCC---eEEEEEEEECCccCCCCCeEEEeEEEEcCCccEEEeCC-CCCHHHHHHHHHHHHHHHHHH
Confidence            99999999999999976   488887 578887  34899999999999999999996 999999999999999999876


Q ss_pred             H
Q 018512          346 Q  346 (354)
Q Consensus       346 ~  346 (354)
                      +
T Consensus       307 ~  307 (309)
T cd05294         307 R  307 (309)
T ss_pred             h
Confidence            5

The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox

>PLN00135 malate dehydrogenase

Probab=100.00  E-value=3.1e-54  Score=409.38  Aligned_cols=272  Identities=22%  Similarity=0.321  Sum_probs=240.9

Q ss_pred             EEEEEecCC----chhHHHHHhcCCC-C-CeEEEEeCCCcHHhhhCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHH
Q 018512           70 VLHLYDVVN----TPGVTADISHMDT-G-AVVRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLC  143 (354)
Q Consensus        70 ei~L~D~~~----~~g~~~dl~~~~~-~-~~v~~~~~~~d~~~al~~aDvVIi~ag~~~~~g~~r~d~~~~n~~~~~~i~  143 (354)
                      .++|+|+++    ++|+++||.|+.. . ..++.   +++.+++++|||+||++||.|+++|++|.|++..|++++++++
T Consensus        15 ~l~L~D~~~~~~~a~g~~~Dl~da~~~~~~~i~~---~~~~y~~~~daDiVVitAG~~~k~g~sR~dll~~N~~I~~~i~   91 (309)
T PLN00135         15 ILHMLDIPPAAEALNGVKMELIDAAFPLLKGVVA---TTDVVEACKGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKSQA   91 (309)
T ss_pred             EEEEecCcccccchhhHHHHHHhhhHHhcCCcEe---cCCHHHHhCCCCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHH
Confidence            899999976    6899999999862 1 22321   3454689999999999999999999999999999999999999


Q ss_pred             HHHhhh-CCCeEEEEecCCCCCchHHHHHHHHHhCCCCCCCEEEe-ccchHHHHHHHHHHHhCCCCCCC-cceEEeecCC
Q 018512          144 EGIAKC-CPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRANTFVAEVLGLDPRDV-DVPVVGGHAG  220 (354)
Q Consensus       144 ~~i~~~-~p~a~viv~tNPv~~~~~~~~~~~~~~~~~p~~kviG~-t~ld~~r~~~~la~~l~v~~~~v-~~~v~G~hg~  220 (354)
                      +.|.++ +|++++|++|||+|++||++    ++.+++|++|+||+ |.||++||++++|+++|+++++| +++||||||+
T Consensus        92 ~~i~~~~~p~aivivvsNPvDv~t~~~----~~~sg~~~~~vig~gt~LDsaR~r~~la~~l~v~~~~V~~~~VlGeHG~  167 (309)
T PLN00135         92 SALEKHAAPDCKVLVVANPANTNALIL----KEFAPSIPEKNITCLTRLDHNRALGQISERLGVPVSDVKNVIIWGNHSS  167 (309)
T ss_pred             HHHHHhcCCCeEEEEeCCcHHHHHHHH----HHHcCCCCccEEEeeehHHHHHHHHHHHHHhCcChhhceeeEEEEcCCC
Confidence            999996 89999999999999998764    78889999999999 89999999999999999999999 6999999999


Q ss_pred             ccccccccccCC----CC-C----CChHH--HHHHHHHHhcchhHHHhhhccCCcchhhHHHHHHHHHHHHHhccCCCCc
Q 018512          221 VTILPLLSQVKP----PC-S----FTQEE--TEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRGLRGDAG  289 (354)
Q Consensus       221 ~~~vp~~s~~~v----~~-~----~~~~~--~~~i~~~v~~~~~~i~~~~~~kg~~~~s~A~a~~~ii~si~~~~~~~~~  289 (354)
                       ++||+||++++    ++ +    +.+++  .++|.+++++++++|++.+  ||++.||+|.++++++++|+++++. ..
T Consensus       168 -s~v~~~S~a~v~~~~~g~p~~e~~~~~~~~~~~i~~~v~~~g~~Ii~~~--kg~t~~~ia~a~~~iv~ai~~~~~~-~~  243 (309)
T PLN00135        168 -TQYPDVNHATVKTPSGEKPVRELVADDAWLNGEFITTVQQRGAAIIKAR--KLSSALSAASSACDHIRDWVLGTPE-GT  243 (309)
T ss_pred             -ceeeccccceEecCCCCcCHHHHhCchhhHHHHHHHHHHHHHHHHHHcc--CccHHHHHHHHHHHHHHHHHhCCcC-Ce
Confidence             99999999988    42 2    23333  5789999999999999953  6899999999999999999995421 25


Q ss_pred             EEEee-eeeccC--CCccEEEEeEEEcCCCeEEeccCCCCCHHHHHHHHHHHHHHHHHHHHhhhhhc
Q 018512          290 VVECA-FVASQV--TELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSIQKGISFSK  353 (354)
Q Consensus       290 v~~~~-~~~g~~--~~~~~~svPv~ig~~Gv~~i~~~~~L~~~E~~~l~~sa~~i~~~~~~~~~~~~  353 (354)
                      ++|++ +++|+|  |+++|||+||++|++|++.+.++ +|+++|+++|++|++.|+++.+.+++.|+
T Consensus       244 v~~vsv~~~g~YGi~~~v~~s~P~vlg~~gve~v~~l-~L~~~E~~~l~~S~~~lk~~~~~~~~~~~  309 (309)
T PLN00135        244 WVSMGVYSDGSYGVPPGLIYSFPVTCEKGEWSIVQGL-SIDEFSRKKMDATAKELKEEKELAYSCLS  309 (309)
T ss_pred             EEEEEEEecCccCCcCCeEEEEEEEEECCEEEEecCC-CCCHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence            99998 679999  48999999999999999999896 99999999999999999999999998764

>cd05295 MDH_like Malate dehydrogenase-like

Probab=100.00  E-value=1.8e-54  Score=425.73  Aligned_cols=294  Identities=16%  Similarity=0.130  Sum_probs=254.1

Q ss_pred             CCCCeEEEEcCCCchHHHHHHHHHhCCCC-----cEEEEEecC--C--chhHHHHHhcCCCC--CeEEEEeCCCcHHhhh
Q 018512           40 AAGFKVAILGAAGGIGQPLAMLMKINPLV-----SVLHLYDVV--N--TPGVTADISHMDTG--AVVRGFLGQPQLENAL  108 (354)
Q Consensus        40 ~~~~kI~IiGa~G~vG~~~a~~l~~~~~~-----~ei~L~D~~--~--~~g~~~dl~~~~~~--~~v~~~~~~~d~~~al  108 (354)
                      .++.+|+|+||+|++|+++++.++....+     -.|+|+|+.  .  ++|+++||+|+.+.  ..+...  +++ ++++
T Consensus       121 ~~p~~V~vtgAag~i~Y~l~~~ia~G~~fG~~~~v~L~LlDi~~~~~~l~G~amDL~D~a~pll~~v~i~--~~~-~ea~  197 (452)
T cd05295         121 INPLQVCITNASAPLCYHLIPSLASGEVFGMEEEISIHLLDSPENLEKLKGLVMEVEDLAFPLLRGISVT--TDL-DVAF  197 (452)
T ss_pred             CCceEEEEecCcHHHHHHHHHHHhCCcccCCCCeEEEEEEcCCCchhhHHHHHHHHHHhHHhhcCCcEEE--ECC-HHHh
Confidence            34579999999999999999999986432     369999994  3  78999999998631  223433  234 6999


Q ss_pred             CCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCC--CeEEEEecCCCCCchHHHHHHHHHhC-CCCCCCEE
Q 018512          109 TGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCP--NATVNLISNPVNSTVPIAAEVFKKAG-TYDPKKLL  185 (354)
Q Consensus       109 ~~aDvVIi~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p--~a~viv~tNPv~~~~~~~~~~~~~~~-~~p~~kvi  185 (354)
                      +|||+||++||.|+++|++|.|++..|++++++++++|.+++|  ++++|++|||+|++|+++    ++.+ ++|++||+
T Consensus       198 ~daDvvIitag~prk~G~~R~DLL~~N~~Ifk~~g~~I~~~a~~~~~VlVv~tNPvD~~t~i~----~k~apgiP~~rVi  273 (452)
T cd05295         198 KDAHVIVLLDDFLIKEGEDLEGCIRSRVAICQLYGPLIEKNAKEDVKVIVAGRTFLNLKTSIL----IKYAPSIPRKNII  273 (452)
T ss_pred             CCCCEEEECCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHH----HHHcCCCCHHHEE
Confidence            9999999999999999999999999999999999999999999  899999999999998765    5666 99999999


Q ss_pred             EeccchHHHHHHHHHHHhCCCCCCC-cceEEeecCCccccccccccCCCC-------------C----CChHH--HHHHH
Q 018512          186 GVTMLDVVRANTFVAEVLGLDPRDV-DVPVVGGHAGVTILPLLSQVKPPC-------------S----FTQEE--TEYLT  245 (354)
Q Consensus       186 G~t~ld~~r~~~~la~~l~v~~~~v-~~~v~G~hg~~~~vp~~s~~~v~~-------------~----~~~~~--~~~i~  245 (354)
                      |++.++++|++++||+++||++++| +++||||||+ ++||+||++++..             +    +.+++  .+++.
T Consensus       274 g~gtlds~R~r~~LA~kl~V~~~~V~~~~VwGeHG~-sqvpd~S~a~V~G~~~a~~~p~~~~~pl~e~i~d~~w~~~~~~  352 (452)
T cd05295         274 AVARLQENRAKALLARKLNVNSAGIKDVIVWGNIGG-NTYIDLSKARVYRYDSAIWGPPNYSRPVLELVHDSKWINGEFV  352 (452)
T ss_pred             EecchHHHHHHHHHHHHhCcCHHHceeeEEEEccCC-ceeeeeeEEEEcccccccccccccCccHHHHhcchhhhHHHHH
Confidence            9966889999999999999999999 6799999999 9999999998732             1    22333  25677


Q ss_pred             HHHhcchhHHHhhhccCCcchhhHHHHHHHHHHHHHhccCCCCcEEEee-eeeccC--CCccEEEEeEEEcCCCeEEecc
Q 018512          246 NRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECA-FVASQV--TELPFFASKVRLGRQGAEEIFQ  322 (354)
Q Consensus       246 ~~v~~~~~~i~~~~~~kg~~~~s~A~a~~~ii~si~~~~~~~~~v~~~~-~~~g~~--~~~~~~svPv~ig~~Gv~~i~~  322 (354)
                      +.++++++   .   +||++.||+|.|+++++++|++|++.+ .++||+ +++|+|  |+|++||+||++|++|++.+.+
T Consensus       353 ~~v~~rg~---~---rkgsT~~siA~A~~~iv~ail~~t~~~-~ilsvsv~sdG~YGip~gv~~S~Pviig~~Gve~V~~  425 (452)
T cd05295         353 ATLKSLSS---S---LNHEAAISPAHAIATTLSYWYHGSPPG-EIFSLGVISEGWYGIPEGIVFSMPVKFQNGSWEVVTD  425 (452)
T ss_pred             HHHHHHHH---h---ccCChHHHHHHHHHHHHHHHHhCCCCC-eEEEEEEeeccccCCcCCEEEEEEEEEeCCeEEEEeC
Confidence            78888877   2   578999999999999999999998533 499998 679999  6899999999999999999999


Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHhh
Q 018512          323 LGPLNEYERIGLEKAKKELAGSIQKGI  349 (354)
Q Consensus       323 ~~~L~~~E~~~l~~sa~~i~~~~~~~~  349 (354)
                      + +|+++|+++|++|+++|.++.+.++
T Consensus       426 L-~L~e~E~~kL~~S~~eL~~E~~~~~  451 (452)
T cd05295         426 L-ELSEILREVLKRITSDLIQEKLVAL  451 (452)
T ss_pred             C-CCCHHHHHHHHHHHHHHHHHHHhhc
Confidence            6 9999999999999999999987764

These MDH-like proteins are related to other groups in the MDH family but do not have conserved substrate and cofactor binding residues. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subgroup are uncharacterized MDH-like proteins from animals. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>TIGR01756 LDH_protist lactate dehydrogenase

Probab=100.00  E-value=3.1e-53  Score=403.52  Aligned_cols=272  Identities=21%  Similarity=0.280  Sum_probs=237.2

Q ss_pred             EEEEEecCC----chhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHH
Q 018512           70 VLHLYDVVN----TPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEG  145 (354)
Q Consensus        70 ei~L~D~~~----~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~ag~~~~~g~~r~d~~~~n~~~~~~i~~~  145 (354)
                      .++|+|+++    ++|+++||.|+. .+.......+++++++++|||+||++||.|+++|++|.|++..|++++++++++
T Consensus        17 ~l~L~D~~~~~~~a~g~a~Dl~d~~-~~~~~~~i~~~~~~~~~~daDiVVitaG~~~k~g~tR~dll~~N~~I~~~i~~~   95 (313)
T TIGR01756        17 CLHLLEIPPALNRLEALAMELEDCA-FPNLAGTIVTTKLEEAFKDIDCAFLVASVPLKPGEVRADLLTKNTPIFKATGEA   95 (313)
T ss_pred             EEEEecCCCccchhHhHHHHHHHhc-cccCCceEecCCHHHHhCCCCEEEECCCCCCCcCCCHHHHHHHHHHHHHHHHHH
Confidence            799999976    689999999987 232211112457778999999999999999999999999999999999999999


Q ss_pred             HhhhCC-CeEEEEecCCCCCchHHHHHHHHHhCCCCCCCEEEe-ccchHHHHHHHHHHHhCCCCCCCcc-eEEeecCCcc
Q 018512          146 IAKCCP-NATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRANTFVAEVLGLDPRDVDV-PVVGGHAGVT  222 (354)
Q Consensus       146 i~~~~p-~a~viv~tNPv~~~~~~~~~~~~~~~~~p~~kviG~-t~ld~~r~~~~la~~l~v~~~~v~~-~v~G~hg~~~  222 (354)
                      |++++| ++++|++|||+|++|+++.   ++.+|||++ +||+ |.||++||++++|++++++|++|+. +||||||+ +
T Consensus        96 i~~~a~~~~ivivvtNPvDv~t~v~~---~~~sg~p~~-vig~gt~LDsaR~r~~la~~l~v~~~~V~~~~V~GeHG~-s  170 (313)
T TIGR01756        96 LSEYAKPTVKVLVIGNPVNTNCLVAM---LHAPKLSAE-NFSSLCMLDHNRAVSRIASKLKVPVDHIYHVVVWGNHAE-S  170 (313)
T ss_pred             HHhhCCCCeEEEEeCCchHHHHHHHH---HHcCCCCHH-HEEecccHHHHHHHHHHHHHhCcChhheeeeEEEECCCC-c
Confidence            999995 5889999999999987641   588999998 9999 8999999999999999999999965 59999999 9


Q ss_pred             ccccccccCC--CC-C------CChH-HHHHHHHHHhcchhHHHhhhccCCcchhhHH-HHHHHHHHHHHhccCCCCcEE
Q 018512          223 ILPLLSQVKP--PC-S------FTQE-ETEYLTNRIQNGGTEVVEAKAGAGSATLSMA-YAAVKFADACLRGLRGDAGVV  291 (354)
Q Consensus       223 ~vp~~s~~~v--~~-~------~~~~-~~~~i~~~v~~~~~~i~~~~~~kg~~~~s~A-~a~~~ii~si~~~~~~~~~v~  291 (354)
                      ++|+||++++  .+ +      ++++ .++++.+++++++++|++   +||+|+|+++ .++++++++|++|++.+ .++
T Consensus       171 ~vp~~S~~~V~~~G~~~~~~~~~~~~~~~~~i~~~v~~~g~~Ii~---~kg~t~~~~~a~ai~~iv~ail~~~~~~-~i~  246 (313)
T TIGR01756       171 MVADLTHAEFTKNGKHQKVFDELCRDYPEPDFFEVIAQRAWKILE---MRGFTSAASPVKASLQHMKAWLFGTRPG-EVL  246 (313)
T ss_pred             eeecccccEEecCCeehhHhhhcCcHhHHHHHHHHHHHHHHHHHh---CcCCcchHHHHHHHHHHHHHHhcCCCCC-eEE
Confidence            9999999988  43 1      2332 367899999999999999   5789999977 69999999999976533 599


Q ss_pred             Eee-eee--ccC--CCccEEEEeEEEcCCCeEEecc-CCCCCHHHHHHHHHHHHHHHHHHHHhhhhh
Q 018512          292 ECA-FVA--SQV--TELPFFASKVRLGRQGAEEIFQ-LGPLNEYERIGLEKAKKELAGSIQKGISFS  352 (354)
Q Consensus       292 ~~~-~~~--g~~--~~~~~~svPv~ig~~Gv~~i~~-~~~L~~~E~~~l~~sa~~i~~~~~~~~~~~  352 (354)
                      ||+ +++  |+|  ++|+++|+||++|++|++++++ + +|+++|+++|++|++.|+++.+.+++.|
T Consensus       247 pvsv~l~~~g~YGi~~~v~~s~P~vig~~Gv~~ive~l-~L~~~E~~~l~~Sa~~l~~e~~~~~~~~  312 (313)
T TIGR01756       247 SMGIPVPEGNPYGIKPGVIFSFPCTVDEDGKVHVVENF-ELNPWLKTKLAQTEKDLFEERETALKAL  312 (313)
T ss_pred             EEEEEecCCCccCCCCCEEEEEEEEEeCCceEEEcCCC-CCCHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence            998 465  388  4799999999999999999999 6 9999999999999999999999998865

This model represents a family of protist lactate dehydrogenases which have aparrently evolved from a recent protist malate dehydrogenase ancestor. Lactate dehydrogenase converts the hydroxyl at C-2 of lactate to a carbonyl in the product, pyruvate. The preference of this enzyme for NAD or NADP has not been determined. A critical residue in malate dehydrogenase, arginine-91 (T. vaginalis numbering) has been mutated to a leucine, eliminating the positive charge which complemeted the carboxylate in malate which is absent in lactate. Several other more subtle changes are proposed to make the active site smaller to accomadate the less bulky lactate molecule.

>cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family

Probab=100.00  E-value=5.6e-50  Score=374.66  Aligned_cols=254  Identities=29%  Similarity=0.441  Sum_probs=229.4

Q ss_pred             EEEEcCCCchHHHHHHHHHhCC--CCcEEEEEecCC--chhHHHHHhcCCCCC-eEEEEeCCCcHHhhhCCCcEEEEcCC
Q 018512           45 VAILGAAGGIGQPLAMLMKINP--LVSVLHLYDVVN--TPGVTADISHMDTGA-VVRGFLGQPQLENALTGMDLVIIPAG  119 (354)
Q Consensus        45 I~IiGa~G~vG~~~a~~l~~~~--~~~ei~L~D~~~--~~g~~~dl~~~~~~~-~v~~~~~~~d~~~al~~aDvVIi~ag  119 (354)
                      |+||||+|.+|+++++.|+..+  ...+|+|+|+++  +++.++|++|+.... ..+.. .++|++++++|||+||+++|
T Consensus         1 I~IIGagG~vG~~ia~~l~~~~~~~~~el~L~D~~~~~l~~~~~dl~~~~~~~~~~~i~-~~~d~~~~~~~aDiVv~t~~   79 (263)
T cd00650           1 IAVIGAGGNVGPALAFGLADGSVLLAIELVLYDIDEEKLKGVAMDLQDAVEPLADIKVS-ITDDPYEAFKDADVVIITAG   79 (263)
T ss_pred             CEEECCCChHHHHHHHHHHhCCCCcceEEEEEeCCcccchHHHHHHHHhhhhccCcEEE-ECCchHHHhCCCCEEEECCC
Confidence            6899998999999999999988  778999999987  688999999875432 23332 35677899999999999999


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCCchHHHHHHHHHhCCCCCCCEEEeccchHHHHHHHH
Q 018512          120 VPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFV  199 (354)
Q Consensus       120 ~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~~~~~~~~~~p~~kviG~t~ld~~r~~~~l  199 (354)
                      .++++|++|.+++.+|++++++++++|+++||++|+|++|||+|++|+++    ++++|+|++|+||+|.+|+.|+++.+
T Consensus        80 ~~~~~g~~r~~~~~~n~~i~~~i~~~i~~~~p~a~~i~~tNP~d~~t~~~----~~~sg~~~~kviG~~~ld~~r~~~~l  155 (263)
T cd00650          80 VGRKPGMGRLDLLKRNVPIVKEIGDNIEKYSPDAWIIVVSNPVDIITYLV----WRYSGLPKEKVIGLGTLDPIRFRRIL  155 (263)
T ss_pred             CCCCcCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCcHHHHHHHH----HHHhCCCchhEEEeecchHHHHHHHH
Confidence            99999999999999999999999999999999999999999999998654    78889999999999559999999999


Q ss_pred             HHHhCCCCCCCcceEEeecCCccccccccccCCCCCCChHHHHHHHHHHhcchhHHHhhhccCCcchhhHHHHHHHHHHH
Q 018512          200 AEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADA  279 (354)
Q Consensus       200 a~~l~v~~~~v~~~v~G~hg~~~~vp~~s~~~v~~~~~~~~~~~i~~~v~~~~~~i~~~~~~kg~~~~s~A~a~~~ii~s  279 (354)
                      |+++|+++++|+++|||+||+ +++|+||+++                                     +|.++++++++
T Consensus       156 a~~l~v~~~~v~~~v~G~hg~-~~~~~~s~~~-------------------------------------~a~~~~~ii~a  197 (263)
T cd00650         156 AEKLGVDPDDVKVYILGEHGG-SQVPDWSTVR-------------------------------------IATSIADLIRS  197 (263)
T ss_pred             HHHhCCCccceEEEEEEcCCC-ceEeccccch-------------------------------------HHHHHHHHHHH
Confidence            999999999999999999999 8999999765                                     67899999999


Q ss_pred             HHhccCCCCcEEEee-eeeccC--CCccEEEEeEEEcCCCeEEeccCCCCCHHHHHHHHHHHHHHHHHH
Q 018512          280 CLRGLRGDAGVVECA-FVASQV--TELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSI  345 (354)
Q Consensus       280 i~~~~~~~~~v~~~~-~~~g~~--~~~~~~svPv~ig~~Gv~~i~~~~~L~~~E~~~l~~sa~~i~~~~  345 (354)
                      |++|++   .++|++ +++|+|  +++++||+||++|++|+++++++ +|+++|+++|+++++.++..+
T Consensus       198 i~~~~~---~~~~v~v~~~g~ygi~~~~~~s~P~~i~~~Gi~~~~~~-~l~~~e~~~l~~s~~~~~~~~  262 (263)
T cd00650         198 LLNDEG---EILPVGVRNNGQIGIPDDVVVSVPCIVGKNGVEEPIEV-GLTDFELEKLQKSADTLKKEL  262 (263)
T ss_pred             HHcCCC---EEEEEEEEeCCccCCcCCEEEEEEEEEeCCceEEEecC-CCCHHHHHHHHHHHHHHHHHh
Confidence            999864   488887 568998  58999999999999999999995 999999999999999999764

Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains

>KOG1496 consensus Malate dehydrogenase [Energy production and conversion]

Probab=100.00  E-value=1.8e-46  Score=332.79  Aligned_cols=304  Identities=25%  Similarity=0.351  Sum_probs=273.0

Q ss_pred             CCCeEEEEcCCCchHHHHHHHHHhCC-----CCcEEEEEecCC----chhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCC
Q 018512           41 AGFKVAILGAAGGIGQPLAMLMKINP-----LVSVLHLYDVVN----TPGVTADISHMDTGAVVRGFLGQPQLENALTGM  111 (354)
Q Consensus        41 ~~~kI~IiGa~G~vG~~~a~~l~~~~-----~~~ei~L~D~~~----~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~a  111 (354)
                      ++.+|.|+||+|.+|+++++.++...     ....++|+|+.+    ++|..++|+++.. |.++.+..++|..++|+|.
T Consensus         3 epirVlVtGAAGqI~ysll~~ia~G~vfG~dQPiiL~lLdi~~~~~~LegV~mELqD~a~-PlL~~Vvattd~~~afkdv   81 (332)
T KOG1496|consen    3 EPIRVLVTGAAGQIGYSLLPMIARGIVFGKDQPIILHLLDIPPMMSVLEGVKMELQDCAL-PLLKGVVATTDEVEAFKDV   81 (332)
T ss_pred             CceEEEeecccchhhHHHHHHHcCceeecCCCceEEEeeCCchHHHHHHHHHHHHHhhhh-hHHHhhhcccChhhhhccC
Confidence            46699999999999999999997631     124899999987    6899999999974 6666655677888999999


Q ss_pred             cEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecCCCCCchHHHHHHHHHhCCCCCCCEEEeccc
Q 018512          112 DLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTML  190 (354)
Q Consensus       112 DvVIi~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~-p~a~viv~tNPv~~~~~~~~~~~~~~~~~p~~kviG~t~l  190 (354)
                      |+.|..++.|+++||+|.|++..|+++++..+..+.+|+ |+.+|+++.||++..+.++   .++++.+|.+++-++|.|
T Consensus        82 ~~ailvGa~PR~eGMERkDll~~NvkIfk~Qg~AL~k~A~~~~KVlVVgNPaNTNali~---~k~ApsIP~kNfs~lTRL  158 (332)
T KOG1496|consen   82 DVAILVGAMPRREGMERKDLLSANVKIFKSQGAALEKYAKPNVKVLVVGNPANTNALIL---KKFAPSIPEKNFSALTRL  158 (332)
T ss_pred             cEEEEeccccCcccchhhhHHhhcceeehhhhHHHHHhcCCCceEEEecCccccchhHH---hhhCCCCchhcchhhhhh
Confidence            999999999999999999999999999999999999998 8999999999999998765   366789999999999999


Q ss_pred             hHHHHHHHHHHHhCCCCCCC-cceEEeecCCccccccccccCCCC---------CCChHHH--HHHHHHHhcchhHHHhh
Q 018512          191 DVVRANTFVAEVLGLDPRDV-DVPVVGGHAGVTILPLLSQVKPPC---------SFTQEET--EYLTNRIQNGGTEVVEA  258 (354)
Q Consensus       191 d~~r~~~~la~~l~v~~~~v-~~~v~G~hg~~~~vp~~s~~~v~~---------~~~~~~~--~~i~~~v~~~~~~i~~~  258 (354)
                      |.+|...++|.++||+.++| +..+||+|+. +|+|+..++++..         .++|+.|  .++...|++|+.-+++.
T Consensus       159 DhNRA~~QlA~klgv~~~~VkNviIWGNHSs-TQyPD~~hA~V~~~~~~~~v~e~v~d~~wL~g~Fi~tVQkRGaavi~a  237 (332)
T KOG1496|consen  159 DHNRALAQLALKLGVPVSDVKNVIIWGNHSS-TQYPDVNHATVNTNGGEKPVKEAVKDDAWLQGEFIETVQKRGAAVIKA  237 (332)
T ss_pred             chhhHHHHHHHhhCCchhhcceeEEeccccc-ccCCCccceeeeccCCcccHHHHhccchhhccchhhHHHhcchHhhhh
Confidence            99999999999999999999 7999999999 9999999998742         2566666  68999999999999997


Q ss_pred             hccCCcchhhHHHHHHHHHHHHHhccCCCCcEEEee-eeeccC--CCccEEEEeEEEcCCCeEEeccCCCCCHHHHHHHH
Q 018512          259 KAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECA-FVASQV--TELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLE  335 (354)
Q Consensus       259 ~~~kg~~~~s~A~a~~~ii~si~~~~~~~~~v~~~~-~~~g~~--~~~~~~svPv~ig~~Gv~~i~~~~~L~~~E~~~l~  335 (354)
                      +  |.++.+|.|.++++++++|+.+++.+. +++++ +.+|.|  |++..||+||++ ++|-|++++..+++++-++++.
T Consensus       238 r--k~SSA~SaA~aacDhi~dw~~gTpeG~-fvSmgV~sDGsYgip~gli~SfPv~~-k~g~wkiVqgl~iddf~r~km~  313 (332)
T KOG1496|consen  238 R--KLSSAMSAAKAACDHIRDWWFGTPEGT-FVSMGVYSDGSYGIPDGLIFSFPVTI-KNGDWKIVQGLPIDDFSREKMD  313 (332)
T ss_pred             h--hhhhhhhHHHhHhhhhhheecCCCCcc-EEEEeeecCCCCCCCCCeEEEcceEe-cCCceEEEcCcchhHHHHHhhh
Confidence            5  678999999999999999999998764 77887 679999  899999999999 7899999998899999999999


Q ss_pred             HHHHHHHHHHHHhhhhhc
Q 018512          336 KAKKELAGSIQKGISFSK  353 (354)
Q Consensus       336 ~sa~~i~~~~~~~~~~~~  353 (354)
                      .++++|.++.+.++..++
T Consensus       314 ~t~~EL~eEkd~a~~~l~  331 (332)
T KOG1496|consen  314 LTAKELKEEKDLAYSCLS  331 (332)
T ss_pred             hhHHHHHHhHHHHHHhhc
Confidence            999999999999998765

>PF02866 Ldh_1_C: lactate/malate dehydrogenase, alpha/beta C-terminal domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR022383 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []

Probab=100.00  E-value=5.9e-33  Score=244.24  Aligned_cols=159  Identities=35%  Similarity=0.552  Sum_probs=145.2

Q ss_pred             ccchHHHHHHHHHHHhCCCCCCCcceEEeecCCccccccccccCCC-----------CCCChHHHHHHHHHHhcchhHHH
Q 018512          188 TMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPP-----------CSFTQEETEYLTNRIQNGGTEVV  256 (354)
Q Consensus       188 t~ld~~r~~~~la~~l~v~~~~v~~~v~G~hg~~~~vp~~s~~~v~-----------~~~~~~~~~~i~~~v~~~~~~i~  256 (354)
                      |.||++||++++|+++|++|.+++++||||||+ ++||+||++++.           ..++++++++|.+++++++++|+
T Consensus         1 T~LDs~R~~~~la~~l~v~~~~v~~~ViGeHg~-s~~~~~S~~~v~g~pl~~~~~~~~~~~~~~~~~l~~~v~~~g~~ii   79 (174)
T PF02866_consen    1 TMLDSARFRYFLAEKLGVNPSSVNAYVIGEHGD-SQVPDWSHAKVGGVPLLSYAKPSGKLSEEELEELTERVRKAGYEII   79 (174)
T ss_dssp             THHHHHHHHHHHHHHHTSGGGGEEEEEEBSSST-TEEEEGGGEEETTEEHHHHHHTTTSSSHHHHHHHHHHHHHHHHHHH
T ss_pred             CccHHHHHHHHHHHHHCcCccceEEEEEecCCc-ceeeeeecccccccccccccccccchhHHhhhccccccEeccceee
Confidence            679999999999999999999999999999999 999999999874           23667788999999999999999


Q ss_pred             hhhccCCcchhhHHHHHHHHHHHHHhccCCCCcEEEee-eeeccC-CCc--cEEEEeEEEcCCCeEEeccCCCCCHHHHH
Q 018512          257 EAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECA-FVASQV-TEL--PFFASKVRLGRQGAEEIFQLGPLNEYERI  332 (354)
Q Consensus       257 ~~~~~kg~~~~s~A~a~~~ii~si~~~~~~~~~v~~~~-~~~g~~-~~~--~~~svPv~ig~~Gv~~i~~~~~L~~~E~~  332 (354)
                      +.|.  |+++||+|.++++++++|++|++   .++|++ +.+|+| .++  +|||+||+||++|++++++.++|+++|++
T Consensus        80 ~~k~--g~t~~s~A~a~~~~v~ail~~~~---~i~~~sv~~~g~yg~~~~~v~~s~P~~ig~~Gv~~i~~~~~L~~~E~~  154 (174)
T PF02866_consen   80 KAKG--GSTSYSIAAAAARIVEAILKDER---RILPVSVYLDGEYGIPDGCVYFSVPVVIGKNGVEKIVEDLPLSEEEQE  154 (174)
T ss_dssp             HHHS--SSCHHHHHHHHHHHHHHHHTTHT---EEEEEEEEEESGGGEESSSEEEEEEEEEETTEEEEEECSBSSTHHHHH
T ss_pred             eecc--ccCcCCHHHHHHHHHHHHhhccc---ccccceeccccccCcccccceecceEEEcCCeeEEEeCCCCCCHHHHH
Confidence            9652  89999999999999999999985   488998 679999 334  99999999999999999984499999999


Q ss_pred             HHHHHHHHHHHHHHHhhhhh
Q 018512          333 GLEKAKKELAGSIQKGISFS  352 (354)
Q Consensus       333 ~l~~sa~~i~~~~~~~~~~~  352 (354)
                      +|++|++.|++.++.+++|+
T Consensus       155 ~l~~sa~~l~~~i~~~~~f~  174 (174)
T PF02866_consen  155 KLKESAKELKKEIEKGLEFV  174 (174)
T ss_dssp             HHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhcC
Confidence            99999999999999999986

L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the C-terminal, and is thought to be an is an unusual alpha+beta fold.; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0055114 oxidation-reduction process; PDB: 4MDH_B 5MDH_A 1GV0_A 1GUZ_D 2EWD_B 2FRM_D 2FNZ_B 2FN7_B 2FM3_A 1LTH_T ....

>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []

Probab=99.97  E-value=1.3e-31  Score=227.67  Aligned_cols=139  Identities=38%  Similarity=0.602  Sum_probs=123.1

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcCCC
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGV  120 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~ag~  120 (354)
                      |||+||||+|+||+++++.|+..++.+||+|+|+++  ++|+++||+|+.............+ +++++|||+||+++|.
T Consensus         1 ~KV~IiGa~G~VG~~~a~~l~~~~l~~ei~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~i~~~~-~~~~~~aDivvitag~   79 (141)
T PF00056_consen    1 MKVAIIGAAGNVGSTLALLLAQQGLADEIVLIDINEDKAEGEALDLSHASAPLPSPVRITSGD-YEALKDADIVVITAGV   79 (141)
T ss_dssp             SEEEEESTTSHHHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHHHHHGSTEEEEEEESS-GGGGTTESEEEETTST
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCceEEeccCcccceeeehhhhhhhhhccccccccccc-ccccccccEEEEeccc
Confidence            799999999999999999999999999999999996  7999999999864332222222234 6889999999999999


Q ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCCchHHHHHHHHHhCCCCCCCEEE
Q 018512          121 PRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLG  186 (354)
Q Consensus       121 ~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~~~~~~~~~~p~~kviG  186 (354)
                      ++++|++|.|++..|+++++++++++++++|+++++++|||+|+++++    +++.+++|++|+||
T Consensus        80 ~~~~g~sR~~ll~~N~~i~~~~~~~i~~~~p~~~vivvtNPvd~~t~~----~~~~s~~~~~kviG  141 (141)
T PF00056_consen   80 PRKPGMSRLDLLEANAKIVKEIAKKIAKYAPDAIVIVVTNPVDVMTYV----AQKYSGFPPNKVIG  141 (141)
T ss_dssp             SSSTTSSHHHHHHHHHHHHHHHHHHHHHHSTTSEEEE-SSSHHHHHHH----HHHHHTSSGGGEEE
T ss_pred             cccccccHHHHHHHhHhHHHHHHHHHHHhCCccEEEEeCCcHHHHHHH----HHHhhCcCcccCcC
Confidence            999999999999999999999999999999999999999999988765    58889999999998

L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....

>cd05197 GH4_glycoside_hydrolases Glycoside Hydrases Family 4

Probab=99.97  E-value=1.2e-29  Score=251.14  Aligned_cols=291  Identities=20%  Similarity=0.181  Sum_probs=191.6

Q ss_pred             CeEEEEcCCCch-HHHHHHHHHhCC---CCcEEEEEecCC-chh----HHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcE
Q 018512           43 FKVAILGAAGGI-GQPLAMLMKINP---LVSVLHLYDVVN-TPG----VTADISHMDTGAVVRGFLGQPQLENALTGMDL  113 (354)
Q Consensus        43 ~kI~IiGa~G~v-G~~~a~~l~~~~---~~~ei~L~D~~~-~~g----~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDv  113 (354)
                      |||+|||| |+. ...+...|+...   ..+||+|+|+++ ...    .+..+.+.. ...++.. .|+|+++|++||||
T Consensus         1 ~KI~iIGg-GS~~tp~li~~l~~~~~~l~~~ei~L~Did~~Rl~~v~~l~~~~~~~~-g~~~~v~-~ttD~~~Al~gADf   77 (425)
T cd05197           1 VKIAIIGG-GSSFTPELVSGLLKTPEELPISEVTLYDIDEERLDIILTIAKRYVEEV-GADIKFE-KTMDLEDAIIDADF   77 (425)
T ss_pred             CEEEEECC-chHhHHHHHHHHHcChhhCCCCEEEEEcCCHHHHHHHHHHHHHHHHhh-CCCeEEE-EeCCHHHHhCCCCE
Confidence            69999999 754 112344555443   358999999998 222    223333222 2345543 36799999999999


Q ss_pred             EEEcCCC------------CCCCCC--------CHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCCchHHHHHHH
Q 018512          114 VIIPAGV------------PRKPGM--------TRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVF  173 (354)
Q Consensus       114 VIi~ag~------------~~~~g~--------~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~~~~  173 (354)
                      ||.+..+            |.+.|.        -......+|+++++++++.|+++||++|+|++|||+|++|+++    
T Consensus        78 Vi~~irvGg~~~r~~De~Iplk~G~~gqeT~G~GG~~~alrni~ii~~i~~~i~~~~P~a~lin~TNP~di~t~a~----  153 (425)
T cd05197          78 VINQFRVGGLTYREKDEQIPLKYGVIGQETVGPGGTFSGLRQIPYVLDIARKXEKLSPDAWYLNFTNPAGEVTEAV----  153 (425)
T ss_pred             EEEeeecCChHHHHHHHhHHHHcCcccccccCcchhhhhhhhHHHHHHHHHHHHHhCCCcEEEecCChHHHHHHHH----
Confidence            9997432            223331        1345678999999999999999999999999999999998654    


Q ss_pred             HHhCCCCCCCEEEeccchHHHHHHHHHHHhCCCCCCCcceEEe-ecCC---------cccccc-----------------
Q 018512          174 KKAGTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVVG-GHAG---------VTILPL-----------------  226 (354)
Q Consensus       174 ~~~~~~p~~kviG~t~ld~~r~~~~la~~l~v~~~~v~~~v~G-~hg~---------~~~vp~-----------------  226 (354)
                      ++.  +|+.||||+|.. +.|+++.+|+.+|+++++|+++++| ||+.         .+..|.                 
T Consensus       154 ~~~--~p~~rviG~c~~-~~r~~~~ia~~lgv~~~~v~~~v~GlnHg~~~s~~~~~G~~l~p~l~~~~~~~~~~~~~~~~  230 (425)
T cd05197         154 RRY--VPPEKAVGLCNV-PIGVMEIVAKLLGESEEKVDWQYAGLNHGIWLNRVRYNGGDVTPKLDEWVEEKSKDWKTENP  230 (425)
T ss_pred             HHh--CCCCcEEEECCC-HHHHHHHHHHHhCCCHHHeEEEEEeccCeEeeEeEEECCeecHHHHHHHHhccCcccccccc
Confidence            666  377899999876 8899999999999999999999999 9974         011111                 


Q ss_pred             -------cccc------CCCCC------CCh----H-------------HHHHHHHHHhcchhHHHh-----hhccCCcc
Q 018512          227 -------LSQV------KPPCS------FTQ----E-------------ETEYLTNRIQNGGTEVVE-----AKAGAGSA  265 (354)
Q Consensus       227 -------~s~~------~v~~~------~~~----~-------------~~~~i~~~v~~~~~~i~~-----~~~~kg~~  265 (354)
                             |...      .+|+.      +.+    +             +..+..+++.+.......     ....++..
T Consensus       231 ~~~~~~~~~~~~~~~~g~~p~~Yl~yy~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~~~~~~~~~~~~~~~~~r~~~  310 (425)
T cd05197         231 FVDQLSPAAIDFYRFYGVLPNPYLRYYLSWDKXRKLEADKEITWKTRADEVGKVEKELFEVYKFIKENPSVVELIKRGGR  310 (425)
T ss_pred             ccccccchHHHHHHhCCCcccCCccccCccchhhhhhHHhhcccCccHHHHHHHHHHHHHHHhhhhhcCChhhhhhcCCc
Confidence                   1100      00110      010    0             001111111110000000     00001223


Q ss_pred             hhhHHHHHHHHHHHHHhccCCCCcEEEeee-eeccC---CCccEEEEeEEEcCCCeEEeccCCCCCHHHHHHHHHHHHHH
Q 018512          266 TLSMAYAAVKFADACLRGLRGDAGVVECAF-VASQV---TELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKEL  341 (354)
Q Consensus       266 ~~s~A~a~~~ii~si~~~~~~~~~v~~~~~-~~g~~---~~~~~~svPv~ig~~Gv~~i~~~~~L~~~E~~~l~~sa~~i  341 (354)
                      .|+  ..+++++++|.+|++.   ++.+++ .+|.+   |+|.++++||+++++|+.++.- ++|++..+++++.-...-
T Consensus       311 ~~~--e~a~~ii~ai~~~~~~---~~~vNv~N~G~I~nLp~d~vVEvp~~v~~~Gi~P~~v-g~lp~~~~~Li~~~~~~e  384 (425)
T cd05197         311 KYS--EAAIPLIRALLNDNGA---RFVVNTRNNGAIANIDDDVVVEVPCLVDKNGPHPIKV-GPLDRFVKGLLRQRKMRE  384 (425)
T ss_pred             ccH--HHHHHHHHHHHcCCCe---EEEEECCCCCCCCCCCCCCEEEEeEEEcCCCceeccc-CCCCHHHHHHHHHHHHHH
Confidence            344  7889999999999763   555554 57776   8899999999999999999866 699998888877755544


Q ss_pred             HHHHHHhh
Q 018512          342 AGSIQKGI  349 (354)
Q Consensus       342 ~~~~~~~~  349 (354)
                      +-.++.++
T Consensus       385 ~l~veAa~  392 (425)
T cd05197         385 RLALEAFL  392 (425)
T ss_pred             HHHHHHHH
Confidence            44454443

Glycoside hydrolases cleave glycosidic bonds to release smaller sugars from oligo- or polysaccharides. Some bacteria simultaneously translocate and phosphorylate disaccharides via the phosphoenolpyruvate-dependent phosphotransferase system (PEP-PTS). After translocation, these phospho-disaccharides may be hydrolyzed by GH4 glycoside hydrolases. Other organisms (such as archaea and Thermotoga maritima) lack the PEP-PTS system, but have several enzymes normally associated with the PEP-PTS operon. GH4 family members include 6-phospho-beta-glucosidases, 6-phospho-alpha-glucosidases, alpha-glucosidases/alpha-glucuronidases (only from Thermotoga), and alpha-galactosidases. They require two cofactors, NAD+ and a divalent metal (Mn2+, Ni2+, Mg2+), for activity. Some also require reducing conditions. GH4 glycoside hydrolases are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families in

>PRK15076 alpha-galactosidase; Provisional

Probab=99.97  E-value=1.2e-29  Score=251.93  Aligned_cols=291  Identities=17%  Similarity=0.146  Sum_probs=196.0

Q ss_pred             CCeEEEEcCCCchHHHHHH--HHH-hCCCC-cEEEEEecCC--ch-hHHHHHhcCC--CCCeEEEEeCCCcHHhhhCCCc
Q 018512           42 GFKVAILGAAGGIGQPLAM--LMK-INPLV-SVLHLYDVVN--TP-GVTADISHMD--TGAVVRGFLGQPQLENALTGMD  112 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~--~l~-~~~~~-~ei~L~D~~~--~~-g~~~dl~~~~--~~~~v~~~~~~~d~~~al~~aD  112 (354)
                      ++||+|||| |++|++.+.  .++ ..++. .||+|+|+++  ++ +... +.+..  .....+.. .++|+++|++|||
T Consensus         1 ~~KIaIIGa-Gsvg~~~~~~~~i~~~~~l~~~evvLvDid~er~~~~~~l-~~~~~~~~~~~~~i~-~ttD~~eal~dAD   77 (431)
T PRK15076          1 MPKITFIGA-GSTVFTKNLLGDILSVPALRDAEIALMDIDPERLEESEIV-ARKLAESLGASAKIT-ATTDRREALQGAD   77 (431)
T ss_pred             CcEEEEECC-CHHHhHHHHHHHHhhCccCCCCEEEEECCCHHHHHHHHHH-HHHHHHhcCCCeEEE-EECCHHHHhCCCC
Confidence            369999999 999998876  665 34443 5999999987  22 2222 33321  12233432 3578889999999


Q ss_pred             EEEEcCCCC-CCCC--------------CCHHHH--------HHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCCchHHH
Q 018512          113 LVIIPAGVP-RKPG--------------MTRDDL--------FNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIA  169 (354)
Q Consensus       113 vVIi~ag~~-~~~g--------------~~r~d~--------~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~  169 (354)
                      |||++++.+ .+++              ++|.|.        +.+|++++++++++|+++||++|+|++|||+|++|+.+
T Consensus        78 fVv~ti~vg~~~~~~~~De~Iplk~G~~~~r~et~G~GG~~~~~r~i~~i~~i~~~i~~~~p~a~iin~tNP~divt~~~  157 (431)
T PRK15076         78 YVINAIQVGGYEPCTVTDFEIPKKYGLRQTIGDTLGIGGIMRALRTIPVLLDICEDMEEVCPDALLLNYVNPMAMNTWAM  157 (431)
T ss_pred             EEeEeeeeCCcchhhhhhhhhHHHcCCeeecccCcCccchhhhhhhHHHHHHHHHHHHHHCCCeEEEEcCChHHHHHHHH
Confidence            999998876 3434              445566        89999999999999999999999999999999997643


Q ss_pred             HHHHHHhCCCCCCCEEEecc--chHHHHHHHHHHHhCCCCCCCcceEEe-ecCC---------ccccccccc---c----
Q 018512          170 AEVFKKAGTYDPKKLLGVTM--LDVVRANTFVAEVLGLDPRDVDVPVVG-GHAG---------VTILPLLSQ---V----  230 (354)
Q Consensus       170 ~~~~~~~~~~p~~kviG~t~--ld~~r~~~~la~~l~v~~~~v~~~v~G-~hg~---------~~~vp~~s~---~----  230 (354)
                          +   ++|+.||||+|+  +++   .+.+|+.+|+++++|++++.| ||..         ++.+|....   .    
T Consensus       158 ----~---~~~~~rviG~c~~~~~~---~~~ia~~l~v~~~~v~~~~~GlNH~~W~~~~~~~G~D~~p~l~~~~~~~~~~  227 (431)
T PRK15076        158 ----N---RYPGIKTVGLCHSVQGT---AEQLARDLGVPPEELRYRCAGINHMAWYLELERKGEDLYPELRAAAAEGQTR  227 (431)
T ss_pred             ----h---cCCCCCEEEECCCHHHH---HHHHHHHhCCCHHHeEEEEEeecchhhheeeeECCcchHHHHHHHHhccCch
Confidence                4   678899999983  554   489999999999999999999 4432         133432110   0    


Q ss_pred             ---CC-----------CC-----------CC----ChHHHHHHHH----HH------hcchhHHH-hhhccCCcchhhHH
Q 018512          231 ---KP-----------PC-----------SF----TQEETEYLTN----RI------QNGGTEVV-EAKAGAGSATLSMA  270 (354)
Q Consensus       231 ---~v-----------~~-----------~~----~~~~~~~i~~----~v------~~~~~~i~-~~~~~kg~~~~s~A  270 (354)
                         .+           +.           .+    .++..+++..    ..      .....+.+ +.+.++..-.-..+
T Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~y~~y~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  307 (431)
T PRK15076        228 CQDKVRYEMLKRFGYFVTESSEHFAEYVPWFIKPGRPDLIERFNIPLDEYPRRCEEQIANWEKEREELANAERIEIKRSR  307 (431)
T ss_pred             hcccccHHHHHHhCCCcccchhhhhhhhcccCcCCCHHHHHHhhcccchhhhhHHHHhhhHHHHHHHhhCCCccccccch
Confidence               01           00           11    2222222221    00      11111111 11111111001134


Q ss_pred             HHHHHHHHHHHhccCCCCcEEEeee-eeccC---CCccEEEEeEEEcCCCeEEeccCCCCCHHHHHHHHHHHHHHHHHHH
Q 018512          271 YAAVKFADACLRGLRGDAGVVECAF-VASQV---TELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSIQ  346 (354)
Q Consensus       271 ~a~~~ii~si~~~~~~~~~v~~~~~-~~g~~---~~~~~~svPv~ig~~Gv~~i~~~~~L~~~E~~~l~~sa~~i~~~~~  346 (354)
                      ..+++++++|.+|.+.   ++.+++ .+|.+   |+|.++++||+++++|+.++.- ++|++..+++++.-...-+-.++
T Consensus       308 e~a~~ii~ai~~~~~~---~~~vnv~N~G~I~~Lp~d~vVEvp~~v~~~G~~P~~~-g~lP~~~~~l~~~~~~~e~l~ve  383 (431)
T PRK15076        308 EYASTIIEAIETGEPS---VIYGNVRNNGLIDNLPQGCCVEVPCLVDRNGIQPTKV-GDLPPQLAALNRTNINVQELTVE  383 (431)
T ss_pred             HHHHHHHHHHhcCCce---EEEEECCCCCcCCCCCCCCEEEEeEEEcCCcceeeec-CCCCHHHHHHHHHHHHHHHHHHH
Confidence            7899999999988763   555554 46776   8899999999999999999876 69999999988776555555555


Q ss_pred             Hhh
Q 018512          347 KGI  349 (354)
Q Consensus       347 ~~~  349 (354)
                      .++
T Consensus       384 Aa~  386 (431)
T PRK15076        384 AAL  386 (431)
T ss_pred             HHH
Confidence            443

>cd05296 GH4_P_beta_glucosidase Glycoside Hydrolases Family 4; Phospho-beta-glucosidase

Probab=99.97  E-value=2.8e-29  Score=248.00  Aligned_cols=286  Identities=19%  Similarity=0.224  Sum_probs=193.6

Q ss_pred             CeEEEEcCCCchHH-HHHHHHHhC-C--CCcEEEEEecC-C--chh---HHHHHhcCCCCCeEEEEeCCCcHHhhhCCCc
Q 018512           43 FKVAILGAAGGIGQ-PLAMLMKIN-P--LVSVLHLYDVV-N--TPG---VTADISHMDTGAVVRGFLGQPQLENALTGMD  112 (354)
Q Consensus        43 ~kI~IiGa~G~vG~-~~a~~l~~~-~--~~~ei~L~D~~-~--~~g---~~~dl~~~~~~~~v~~~~~~~d~~~al~~aD  112 (354)
                      |||+|||| |++-. .+...|+.. .  ..++|+|+|++ +  +..   .+.++.... .+.++.. .|+|+++|++|||
T Consensus         1 ~KI~iIGa-GS~~tp~li~~l~~~~~~l~~~ei~L~Did~~~rl~~v~~~~~~~~~~~-~~~~~v~-~t~d~~~al~gad   77 (419)
T cd05296           1 MKLTIIGG-GSSYTPELIEGLIRRYEELPVTELVLVDIDEEEKLEIVGALAKRMVKKA-GLPIKVH-LTTDRREALEGAD   77 (419)
T ss_pred             CEEEEECC-chHhHHHHHHHHHhccccCCCCEEEEecCChHHHHHHHHHHHHHHHHhh-CCCeEEE-EeCCHHHHhCCCC
Confidence            69999999 76522 234455553 2  35899999999 5  211   122232222 2334443 3679999999999


Q ss_pred             EEEEcCCCCCCCCCCHHH--------------------HHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCCchHHHHHH
Q 018512          113 LVIIPAGVPRKPGMTRDD--------------------LFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEV  172 (354)
Q Consensus       113 vVIi~ag~~~~~g~~r~d--------------------~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~~~  172 (354)
                      |||++++.++.+++++++                    ...+|+++++++++.|+++||++|+|++|||++++|+.    
T Consensus        78 fVi~~~~vg~~~~r~~de~i~~~~Gi~gqET~G~GG~~~a~rni~ii~~i~~~i~~~~Pda~lin~TNP~~ivt~a----  153 (419)
T cd05296          78 FVFTQIRVGGLEARALDERIPLKHGVIGQETTGAGGFAKALRTIPVILDIAEDVEELAPDAWLINFTNPAGIVTEA----  153 (419)
T ss_pred             EEEEEEeeCCcchhhhhhhhHHHcCCccccCCCcchHHHhhhhHHHHHHHHHHHHHHCCCeEEEEecCHHHHHHHH----
Confidence            999998776555444333                    47899999999999999999999999999999999754    


Q ss_pred             HHHhCCCCCCCEEEeccchHHHHHHHHHHHhCCCCCCCcceEEe-ecCC---------cccccc----------------
Q 018512          173 FKKAGTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVVG-GHAG---------VTILPL----------------  226 (354)
Q Consensus       173 ~~~~~~~p~~kviG~t~ld~~r~~~~la~~l~v~~~~v~~~v~G-~hg~---------~~~vp~----------------  226 (354)
                      +++.+   +.||||+|..+ .|+++.+|+.+|+++++|+++++| ||..         ++.+|.                
T Consensus       154 ~~k~~---~~rviGlc~~~-~r~~~~ia~~lg~~~~~v~~~v~GlNH~~w~~~~~~~G~D~~p~l~~~~~~~~~~~~~~~  229 (419)
T cd05296         154 VLRHT---GDRVIGLCNVP-IGLQRRIAELLGVDPEDVFIDYAGLNHLGWLRRVLLDGEDVLPELLEDLAALLSFEEGLL  229 (419)
T ss_pred             HHHhc---cCCEEeeCCcH-HHHHHHHHHHhCCCHHHceEEEEecccceeeeeeeECCcccHHHHHHHhhhccccccccc
Confidence            46765   67999999874 799999999999999999999999 8755         244541                


Q ss_pred             cccc------CCCCC------CChHHHH--------------HHHHHH----hcch----hHHHhhhccCCcchhhHHHH
Q 018512          227 LSQV------KPPCS------FTQEETE--------------YLTNRI----QNGG----TEVVEAKAGAGSATLSMAYA  272 (354)
Q Consensus       227 ~s~~------~v~~~------~~~~~~~--------------~i~~~v----~~~~----~~i~~~~~~kg~~~~s~A~a  272 (354)
                      |+..      .+|+.      +.++..+              ++.+++    ++..    .+.+.   .++...|+  ..
T Consensus       230 ~~~~~~~~~g~~p~~Yl~yy~~~~~~~~~~~~~~~~r~e~~~~~~~~l~~~~~~~~~~~~~~~~~---~r~g~~y~--e~  304 (419)
T cd05296         230 FGPELLRALGALPNEYLRYYYQTDEALEEILEAAGTRGEVVKEVEKELFELYKDPNLDEKPKELE---KRGGAGYS--EA  304 (419)
T ss_pred             hHHHHHHhcCCcccchHHHHCCcHHHHHHhhhhccchHHHHHHHHHHHHHHHhccccccChHhhH---hhcCcchH--HH
Confidence            1111      01110      1121111              111111    1110    00001   12233344  78


Q ss_pred             HHHHHHHHHhccCCCCcEEEeee-eeccC---CCccEEEEeEEEcCCCeEEeccCCCCCHHHHHHHHHHHHHHHHHHHHh
Q 018512          273 AVKFADACLRGLRGDAGVVECAF-VASQV---TELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSIQKG  348 (354)
Q Consensus       273 ~~~ii~si~~~~~~~~~v~~~~~-~~g~~---~~~~~~svPv~ig~~Gv~~i~~~~~L~~~E~~~l~~sa~~i~~~~~~~  348 (354)
                      +++++++|.+|.+.   ++.+++ .+|.+   |+|.++++||.++++|+.++.- ++|++...++++.-...=+-.++.+
T Consensus       305 a~~ii~ai~~~~~~---~~~vNv~N~G~I~~Lp~d~vVEvp~~v~~~G~~P~~v-g~lP~~~~~l~~~~~~~e~l~veAa  380 (419)
T cd05296         305 ALALISAIYNDKGD---IHVVNVRNNGAIPGLPDDAVVEVPCVVDADGAHPLPV-GPLPPAILGLIQQVKAYERLTIEAA  380 (419)
T ss_pred             HHHHHHHHhcCCCc---EEEEECCCCCCCCCCCCCCEEEEeEEEcCCCceeccC-CCCCHHHHHHHHHHHHHHHHHHHHH
Confidence            89999999988763   444554 57776   8899999999999999999866 6999998888766544443344444

Some bacteria simultaneously translocate and phosphorylate disaccharides via the phosphoenolpyruvate-dependent phosphotransferase system (PEP-PTS). After translocation, these phospho-disaccharides may be hydrolyzed by the GH4 glycoside hydrolases such as the phospho-beta-glucosidases. Other organisms (such as archaea and Thermotoga maritima ) lack the PEP-PTS system, but have several enzymes normally associated with the PEP-PTS operon. The 6-phospho-beta-glucosidase from Thermotoga maritima hydrolylzes cellobiose 6-phosphate (6P) into glucose-6P and glucose, in an NAD+ and Mn2+ dependent fashion. The Escherichia coli 6-phospho-beta-glucosidase (also called celF) hydrolyzes a variety of phospho-beta-glucosides including cellobiose-6P, salicin-6P, arbutin-6P, and gentobiose-6P. Phospho-beta-glucosidases are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein

>cd05298 GH4_GlvA_pagL_like Glycoside Hydrolases Family 4; GlvA- and pagL-like glycosidases

Probab=99.96  E-value=6.3e-28  Score=239.22  Aligned_cols=293  Identities=18%  Similarity=0.221  Sum_probs=192.2

Q ss_pred             CeEEEEcCCCch-HHHHHHHHHhCC--C-CcEEEEEecCC-chh----HHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcE
Q 018512           43 FKVAILGAAGGI-GQPLAMLMKINP--L-VSVLHLYDVVN-TPG----VTADISHMDTGAVVRGFLGQPQLENALTGMDL  113 (354)
Q Consensus        43 ~kI~IiGa~G~v-G~~~a~~l~~~~--~-~~ei~L~D~~~-~~g----~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDv  113 (354)
                      |||+|||| |+. +..+...|+...  + .++|+|+|+++ ...    .+..+.+.. ...++.. .|+|+++|++||||
T Consensus         1 ~KI~iIGa-GS~~tp~li~~l~~~~~~l~~~ei~L~DId~~rl~~v~~l~~~~~~~~-g~~~~v~-~Ttdr~eAl~gADf   77 (437)
T cd05298           1 FKIVIAGG-GSTYTPGIVKSLLDRKEDFPLRELVLYDIDAERQEKVAEAVKILFKEN-YPEIKFV-YTTDPEEAFTDADF   77 (437)
T ss_pred             CeEEEECC-cHHHHHHHHHHHHhCcccCCCCEEEEECCCHHHHHHHHHHHHHHHHhh-CCCeEEE-EECCHHHHhCCCCE
Confidence            79999999 754 222344555542  3 58999999998 222    223333222 2345543 36799999999999


Q ss_pred             EEEcCCC------------CCCCCC---C-----HHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCCchHHHHHHH
Q 018512          114 VIIPAGV------------PRKPGM---T-----RDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVF  173 (354)
Q Consensus       114 VIi~ag~------------~~~~g~---~-----r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~~~~  173 (354)
                      ||.+..+            |.+.|.   +     ......||++++.++++.|+++||+||+|++|||++++|+.    +
T Consensus        78 Vi~~irvGg~~~r~~De~Ip~kyGi~gqET~G~GG~~~alRtip~~~~i~~~i~~~~pda~lin~tNP~~~vt~~----~  153 (437)
T cd05298          78 VFAQIRVGGYAMREQDEKIPLKHGVVGQETCGPGGFAYGLRSIGPMIELIDDIEKYSPDAWILNYSNPAAIVAEA----L  153 (437)
T ss_pred             EEEEeeeCCchHHHHHHhHHHHcCcceecCccHHHHHHHHhhHHHHHHHHHHHHHHCCCeEEEEecCcHHHHHHH----H
Confidence            9997432            223332   1     34567899999999999999999999999999999999754    4


Q ss_pred             HHhCCCCCCCEEEeccchHHHHHHHHHHHhCCCCCCCcceEEe-ecCC----------ccccccccc-------------
Q 018512          174 KKAGTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVVG-GHAG----------VTILPLLSQ-------------  229 (354)
Q Consensus       174 ~~~~~~p~~kviG~t~ld~~r~~~~la~~l~v~~~~v~~~v~G-~hg~----------~~~vp~~s~-------------  229 (354)
                      ++.  +|+.||||+|+... .++..+|+.+|+++++++..+.| ||..          ++.+|....             
T Consensus       154 ~~~--~~~~kviGlC~~~~-~~~~~la~~lg~~~~~v~~~~~GlNH~~w~~~~~~~~G~D~~p~l~e~~~~~~~~~~~~~  230 (437)
T cd05298         154 RRL--FPNARILNICDMPI-AIMDSMAAILGLDRKDLEPDYFGLNHFGWFTKIYDKQGEDLLPKLREHVKENGYLPPDSD  230 (437)
T ss_pred             HHH--CCCCCEEEECCcHH-HHHHHHHHHhCCCHHHceEEEEeecchhhhhheEECCCCchHHHHHHHHhccCCCccccc
Confidence            555  77899999998754 47899999999999999999999 3322          133332110             


Q ss_pred             -c---C-------------------CCCC-----C-ChHH--------------HHHHHHHHhcchhHHHhhhccCCcch
Q 018512          230 -V---K-------------------PPCS-----F-TQEE--------------TEYLTNRIQNGGTEVVEAKAGAGSAT  266 (354)
Q Consensus       230 -~---~-------------------v~~~-----~-~~~~--------------~~~i~~~v~~~~~~i~~~~~~kg~~~  266 (354)
                       .   .                   +++.     + .++-              +++..+++.+...++.....-+....
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~g~~~p~~y~~yy~~~~~~~~~~~~~~~~~~e~~~~~~~~l~~~~~~~~~~~~~~~~~~  310 (437)
T cd05298         231 EEHRDPSWNDTFANAKDMMADFPDYLPNTYLQYYLYPDYMVEHSNPNYTRANEVMDGREKRVFEECRKIIETGTAEGSTF  310 (437)
T ss_pred             ccccccCchHHHHHHhhHHHhCCCcCCCchhhHhCChHHHHHHhccccccHHHHHHHHHHHHHHHHhhhhhcCChhhhhh
Confidence             0   0                   1110     0 1110              11111111110000000000000011


Q ss_pred             h--hHHHHHHHHHHHHHhccCCCCcEEEee-eeeccC---CCccEEEEeEEEcCCCeEEeccCCCCCHHHHHHHHHHHHH
Q 018512          267 L--SMAYAAVKFADACLRGLRGDAGVVECA-FVASQV---TELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKE  340 (354)
Q Consensus       267 ~--s~A~a~~~ii~si~~~~~~~~~v~~~~-~~~g~~---~~~~~~svPv~ig~~Gv~~i~~~~~L~~~E~~~l~~sa~~  340 (354)
                      .  ..|.++++++++|++|.+   .+++++ ..+|.|   |+|+++|+||+||++|+.++.- ++|++...++++.-...
T Consensus       311 ~~~~ya~~a~~ii~aI~~d~~---~~~~vnv~n~G~i~nL~~d~~vevP~~v~~~Gi~pi~v-g~lP~~~~~l~~~~~~~  386 (437)
T cd05298         311 HVDVHGEYIVDLAASIAYNTK---ERFLVIVENNGAIPNLPDDAMVEVPAYIGSNGPEPLVV-GKIPTFYKGLMEQQVAY  386 (437)
T ss_pred             hccchHHHHHHHHHHHHcCCC---eEEEEEeecCCccCCCCCCcEEEEEEEEeCCCceeccc-CCCCHHHHHHHHHHHHH
Confidence            0  245889999999999876   478887 457887   6899999999999999999866 69999999887776555


Q ss_pred             HHHHHHHhh
Q 018512          341 LAGSIQKGI  349 (354)
Q Consensus       341 i~~~~~~~~  349 (354)
                      -+-.++.++
T Consensus       387 e~l~veAa~  395 (437)
T cd05298         387 EKLLVEAYL  395 (437)
T ss_pred             HHHHHHHHH
Confidence            555555443

Bacillus subtilis GlvA and Clostridium acetobutylicum pagL are 6-phospho-alpha-glucosidase, catalyzing the hydrolysis of alpha-glucopyranoside bonds to release glucose from oligosaccharides. The substrate specificities of other members of this subgroup are unknown. Some bacteria simultaneously translocate and phosphorylate disaccharides via the phosphoenolpyruvate-dependent phosphotransferase system (PEP_PTS). After translocation, these phospho-disaccharides may be hydrolyzed by the GH4 glycoside hydrolases, which include 6-phospho-beta-glucosidases, 6-phospho-alpha-glucosidases, alpha-glucosidases/alpha-glucuronidases (only from Thermotoga), and alpha-galactosidases. Members of this subfamily are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductas

>COG1486 CelF Alpha-galactosidases/6-phospho-beta-glucosidases, family 4 of glycosyl hydrolases [Carbohydrate transport and metabolism]

Probab=99.95  E-value=3.3e-26  Score=222.78  Aligned_cols=293  Identities=20%  Similarity=0.248  Sum_probs=191.9

Q ss_pred             CCCeEEEEcCCCchHHHH-H-HHHHhCC--CCcEEEEEecCC-chhH----HHHHhcCCCCCeEEEEeCCCcHHhhhCCC
Q 018512           41 AGFKVAILGAAGGIGQPL-A-MLMKINP--LVSVLHLYDVVN-TPGV----TADISHMDTGAVVRGFLGQPQLENALTGM  111 (354)
Q Consensus        41 ~~~kI~IiGa~G~vG~~~-a-~~l~~~~--~~~ei~L~D~~~-~~g~----~~dl~~~~~~~~v~~~~~~~d~~~al~~a  111 (354)
                      +.+||+|||| |+++..- . -.|...+  ...+|+|+|+++ ....    +..+-+.. .+.++.. .++|+++|++||
T Consensus         2 ~~~KI~iIGg-GSt~tp~~v~g~l~~~e~l~~~el~L~Did~~r~~~i~~~~~~~v~~~-g~~~kv~-~ttd~~eAl~gA   78 (442)
T COG1486           2 KKFKIVIIGG-GSTYTPKLLLGDLARTEELPVRELALYDIDEERLKIIAILAKKLVEEA-GAPVKVE-ATTDRREALEGA   78 (442)
T ss_pred             CcceEEEECC-CccccHHHHHHHHhcCccCCcceEEEEeCCHHHHHHHHHHHHHHHHhh-CCCeEEE-EecCHHHHhcCC
Confidence            4579999999 8776653 2 2333333  357999999997 2222    22232222 2335554 367899999999


Q ss_pred             cEEEEcCCC------------CCCCCCC--------HHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCCchHHHHH
Q 018512          112 DLVIIPAGV------------PRKPGMT--------RDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAE  171 (354)
Q Consensus       112 DvVIi~ag~------------~~~~g~~--------r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~~  171 (354)
                      ||||.+..+            |.+.|..        ..-...+++|++.+|++.|+++||+||++++|||+.++|.    
T Consensus        79 dfVi~~~rvG~l~~r~~De~IplkyG~~gqET~G~GGi~~glRtIpvildi~~~m~~~~P~Aw~lNytNP~~~vTe----  154 (442)
T COG1486          79 DFVITQIRVGGLEAREKDERIPLKHGLYGQETNGPGGIFYGLRTIPVILDIAKDMEKVCPNAWMLNYTNPAAIVTE----  154 (442)
T ss_pred             CEEEEEEeeCCcccchhhhccchhhCccccccccccHHHhhcccchHHHHHHHHHHHhCCCceEEeccChHHHHHH----
Confidence            999996432            3444422        2345578999999999999999999999999999999964    


Q ss_pred             HHHHhCCCCCCCEEEeccchHHHHHHHHHHHhCCCC-CCCcceEEe-ecCC---------cccccc--------------
Q 018512          172 VFKKAGTYDPKKLLGVTMLDVVRANTFVAEVLGLDP-RDVDVPVVG-GHAG---------VTILPL--------------  226 (354)
Q Consensus       172 ~~~~~~~~p~~kviG~t~ld~~r~~~~la~~l~v~~-~~v~~~v~G-~hg~---------~~~vp~--------------  226 (354)
                      ++.+.  +|..|+||+|+... .....+|+.||+++ ++++..+.| +|..         .+.+|.              
T Consensus       155 Av~r~--~~~~K~VGlCh~~~-g~~~~lAe~L~~~~~~~l~~~~aGlNH~~w~~~~~~~G~d~~p~l~~~~~~~~~~~~~  231 (442)
T COG1486         155 AVRRL--YPKIKIVGLCHGPI-GIAMELAEVLGLEPREDLRYRVAGLNHMVWILRVRDDGEDLYPELLEALEEGGSPSEP  231 (442)
T ss_pred             HHHHh--CCCCcEEeeCCchH-HHHHHHHHHhCCCchhceeEEEeechhhhhhhHhhhcCccchHHHHHHHhccccCCcc
Confidence            45664  45459999998654 57899999999975 999999999 3322         122221              


Q ss_pred             ---------ccccC----C---CCC------CChH----HHHH------HHHHHhcchhHHHhhh------------ccC
Q 018512          227 ---------LSQVK----P---PCS------FTQE----ETEY------LTNRIQNGGTEVVEAK------------AGA  262 (354)
Q Consensus       227 ---------~s~~~----v---~~~------~~~~----~~~~------i~~~v~~~~~~i~~~~------------~~k  262 (354)
                               |....    .   ++.      +++.    ...+      -.+++.++..+.++.+            ..+
T Consensus       232 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ra~ev~~re~~~~~~~~~~~~~~~p~~~~~~  311 (442)
T COG1486         232 ENKNIQSPVWIDMFLKYGYPVLPSSYHRYYYYPYDMKEKKPDEIEKFGTRANEVMKREKELFELYKKPELKEKPEELEKR  311 (442)
T ss_pred             ccccccCcchHHHHHHhCcCcccCcchhhheehHhhhhccchhhhhcCCCHHHHHHHHHHHHHHHhhhhhhcCchhhhhc
Confidence                     11100    0   000      0000    0000      0111121111111110            112


Q ss_pred             Ccc--hhhHHHHHHHHHHHHHhccCCCCcEEEeee-eeccC---CCccEEEEeEEEcCCCeEEeccCCCCCHHHHHHHHH
Q 018512          263 GSA--TLSMAYAAVKFADACLRGLRGDAGVVECAF-VASQV---TELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEK  336 (354)
Q Consensus       263 g~~--~~s~A~a~~~ii~si~~~~~~~~~v~~~~~-~~g~~---~~~~~~svPv~ig~~Gv~~i~~~~~L~~~E~~~l~~  336 (354)
                      +.+  .|+  .+++++++||++|++.   ++.+++ .+|.+   |+|.++++||.++++|++++.. ++|++.-+++++.
T Consensus       312 ~~~~~~~~--e~a~~ii~Ai~~~~~~---~~~vNv~N~G~I~nlp~D~vVEvpc~Vd~~Gi~P~~~-g~lP~~~~~l~~~  385 (442)
T COG1486         312 IGAGKYSS--EYASNIINAIENNKPS---RIYVNVRNNGAITNLPDDAVVEVPCLVDRNGIHPLAV-GDLPEFVKGLMHT  385 (442)
T ss_pred             CCcccccH--HHHHHHHHHHhcCCce---EEEEEcCCCccccCCCCCeEEEeeEEecCCCCccccc-CCCCHHHHHHHHH
Confidence            222  444  7789999999999864   555554 57876   8999999999999999999877 6999999999888


Q ss_pred             HHHHHHHHHHHhh
Q 018512          337 AKKELAGSIQKGI  349 (354)
Q Consensus       337 sa~~i~~~~~~~~  349 (354)
                      ....-+-.++.++
T Consensus       386 ~i~~e~l~veA~~  398 (442)
T COG1486         386 NINVEELTVEAAL  398 (442)
T ss_pred             HHHHHHHHHHHHH
Confidence            7766655555443

>cd05297 GH4_alpha_glucosidase_galactosidase Glycoside Hydrolases Family 4; Alpha-glucosidases and alpha-galactosidases

Probab=99.94  E-value=1.3e-25  Score=223.19  Aligned_cols=291  Identities=17%  Similarity=0.147  Sum_probs=194.8

Q ss_pred             CeEEEEcCCCchHHHHHH--HHHhC-CC-CcEEEEEecCC--chhHHHHHhcCC--CCCeEEEEeCCCcHHhhhCCCcEE
Q 018512           43 FKVAILGAAGGIGQPLAM--LMKIN-PL-VSVLHLYDVVN--TPGVTADISHMD--TGAVVRGFLGQPQLENALTGMDLV  114 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~--~l~~~-~~-~~ei~L~D~~~--~~g~~~dl~~~~--~~~~v~~~~~~~d~~~al~~aDvV  114 (354)
                      +||+|||| |++|++.+.  .++.. .. ..+|+|+|+++  ++....++.+..  .....+.. .++|+++|++|||+|
T Consensus         1 ~KIaIIGa-Gs~G~a~a~~~~i~~~~~~~g~eV~L~Did~e~l~~~~~~~~~~~~~~~~~~~I~-~ttD~~eal~~AD~V   78 (423)
T cd05297           1 IKIAFIGA-GSVVFTKNLVGDLLKTPELSGSTIALMDIDEERLETVEILAKKIVEELGAPLKIE-ATTDRREALDGADFV   78 (423)
T ss_pred             CeEEEECC-ChHHhHHHHHHHHhcCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHhcCCCeEEE-EeCCHHHHhcCCCEE
Confidence            58999999 999999776  45433 33 34999999987  344444443321  11223332 357888999999999


Q ss_pred             EEcCCCCCCCCCCH----------------------HHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCCchHHHHHH
Q 018512          115 IIPAGVPRKPGMTR----------------------DDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEV  172 (354)
Q Consensus       115 Ii~ag~~~~~g~~r----------------------~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~~~  172 (354)
                      |++++.....+.++                      .....+|++.+.++++.++++||++|++++|||++++|++    
T Consensus        79 i~ai~~~~~~~~~~de~i~~K~g~~~~~~~t~g~ggi~~~~~s~~~i~~ia~~i~~~~p~a~~i~~tNPv~i~t~~----  154 (423)
T cd05297          79 INTIQVGGHEYTETDFEIPEKYGYYQTVGDTSGPGGIFRALRTIPVLLDIARDIEELCPDAWLLNYANPMAELTWA----  154 (423)
T ss_pred             EEeeEecCccchhhhhhhHHHcCeeeeccCCCcHHHHHHHHhhHHHHHHHHHHHHHHCCCCEEEEcCChHHHHHHH----
Confidence            99987654443332                      4566889999999999999999999999999999999754    


Q ss_pred             HHHhCCCCCCCEEEeccchHHHHHHHHHHHhCCCCCCCcceEEe-ecCC---------ccccccccc-----------cC
Q 018512          173 FKKAGTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVVG-GHAG---------VTILPLLSQ-----------VK  231 (354)
Q Consensus       173 ~~~~~~~p~~kviG~t~ld~~r~~~~la~~l~v~~~~v~~~v~G-~hg~---------~~~vp~~s~-----------~~  231 (354)
                      +++.++   .|++|+|+. +.++++.+|+.+|+++++|+++++| ||..         ++.+|....           ..
T Consensus       155 ~~k~~~---~rviG~c~~-~~~~~~~~a~~l~~~~~~v~~~~~GlNH~~w~~~~~~~G~d~~p~l~~~~~~~~~~~~~~~  230 (423)
T cd05297         155 LNRYTP---IKTVGLCHG-VQGTAEQLAKLLGEPPEEVDYQVAGINHMAWLLKFEYNGEDLYPLLDEWIEEGSEEWDQLS  230 (423)
T ss_pred             HHHhCC---CCEEEECCc-HHHHHHHHHHHhCCCHHHeEEEEEeeccHhhhhhheECCcchHHHHHHHHhccCccchhcc
Confidence            477665   799999865 6789999999999999999999999 4422         234442111           11


Q ss_pred             -CC-----------C-------C------CChHHHHHHH--------------HHHhcchh--HHHhh--hccCCcchhh
Q 018512          232 -PP-----------C-------S------FTQEETEYLT--------------NRIQNGGT--EVVEA--KAGAGSATLS  268 (354)
Q Consensus       232 -v~-----------~-------~------~~~~~~~~i~--------------~~v~~~~~--~i~~~--~~~kg~~~~s  268 (354)
                       ++           .       .      ..++......              +.......  ...+.  ....+...| 
T Consensus       231 ~~~~~~~~~~g~~p~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  309 (423)
T cd05297         231 PVRFDMYRRYGLFPTESSEHLSEYVPHYRKETKKIWYGEFNEDEYGGRDEEQGWEWYEERLKLILAEIDKEELDPVKRS-  309 (423)
T ss_pred             cchHHHHHHcCCcccCcchhhhhhccccccchhhHHhhhhcccccchhHHHHHHHHHHhhhhhccchhcchhccccccc-
Confidence             10           0       0      0111111100              00000000  00000  000111223 


Q ss_pred             HHHHHHHHHHHHHhccCCCCcEEEeee-eeccC---CCccEEEEeEEEcCCCeEEeccCCCCCHHHHHHHHHHHHHHHHH
Q 018512          269 MAYAAVKFADACLRGLRGDAGVVECAF-VASQV---TELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGS  344 (354)
Q Consensus       269 ~A~a~~~ii~si~~~~~~~~~v~~~~~-~~g~~---~~~~~~svPv~ig~~Gv~~i~~~~~L~~~E~~~l~~sa~~i~~~  344 (354)
                       +..+++++++|.+|.+.   ++.+++ .+|.+   |+|.++++||+|+++|+.++.. ++|++..+++++.-...-+-.
T Consensus       310 -~e~a~~ii~ai~~~~~~---~~~vnv~N~G~I~~Lp~d~vVEvp~~v~~~G~~p~~~-g~lp~~~~~l~~~~~~~e~l~  384 (423)
T cd05297         310 -GEYASPIIEALVTGKPR---RINGNVPNNGLIPNLPDDVVVEVPALVDRNGIHPEKI-GPLPPQLAALIRPRINVQELA  384 (423)
T ss_pred             -hHHHHHHHHHHhcCCce---EEEEECCCCCCCCCCCCCcEEEEeeEEcCCCceeccc-CCCCHHHHHHHHHHHHHHHHH
Confidence             36789999999998763   555554 57775   8899999999999999999876 699999998887765555545


Q ss_pred             HHHhh
Q 018512          345 IQKGI  349 (354)
Q Consensus       345 ~~~~~  349 (354)
                      ++.++
T Consensus       385 veA~~  389 (423)
T cd05297         385 VEAAL  389 (423)
T ss_pred             HHHHH
Confidence            55443

linked to 3D####ucture

>PF02056 Glyco_hydro_4: Family 4 glycosyl hydrolase; InterPro: IPR001088 O-Glycosyl hydrolases 3

Probab=99.83  E-value=7e-20  Score=160.87  Aligned_cols=152  Identities=22%  Similarity=0.253  Sum_probs=104.3

Q ss_pred             eEEEEcCCCchHHHH--HHHHHhCC-C-CcEEEEEecCC-ch----hHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEE
Q 018512           44 KVAILGAAGGIGQPL--AMLMKINP-L-VSVLHLYDVVN-TP----GVTADISHMDTGAVVRGFLGQPQLENALTGMDLV  114 (354)
Q Consensus        44 kI~IiGa~G~vG~~~--a~~l~~~~-~-~~ei~L~D~~~-~~----g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvV  114 (354)
                      ||+|||| |++-+..  ...+...+ + .+||+|+|+|+ ..    ..+..+.... ...++.. .|+|+++|++|||||
T Consensus         1 KI~iIGa-GS~~~~~~l~~~l~~~~~l~~~ei~L~Did~~RL~~~~~~~~~~~~~~-~~~~~v~-~ttd~~eAl~gADfV   77 (183)
T PF02056_consen    1 KITIIGA-GSTYFPLLLLGDLLRTEELSGSEIVLMDIDEERLEIVERLARRMVEEA-GADLKVE-ATTDRREALEGADFV   77 (183)
T ss_dssp             EEEEETT-TSCCHHHHHHHHHHCTTTSTEEEEEEE-SCHHHHHHHHHHHHHHHHHC-TTSSEEE-EESSHHHHHTTESEE
T ss_pred             CEEEECC-chHhhHHHHHHHHhcCccCCCcEEEEEcCCHHHHHHHHHHHHHHHHhc-CCCeEEE-EeCCHHHHhCCCCEE
Confidence            8999999 8775553  23444443 2 46999999998 11    2223333222 2334432 357999999999999


Q ss_pred             EEcCCC------------CCCCCCC----------HHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCCchHHHHHH
Q 018512          115 IIPAGV------------PRKPGMT----------RDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEV  172 (354)
Q Consensus       115 Ii~ag~------------~~~~g~~----------r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~~~  172 (354)
                      |++...            |.+.|..          ......|++|.+.++++.|+++||+||+||+|||+.++|.    +
T Consensus        78 i~~irvGg~~~r~~De~Ip~k~Gi~~~~~eT~G~GG~~~alRtipv~~~ia~~i~~~~PdAw~iNytNP~~~vt~----a  153 (183)
T PF02056_consen   78 INQIRVGGLEAREIDEEIPLKYGIVGTIQETVGPGGFFRALRTIPVMLDIARDIEELCPDAWLINYTNPMGIVTE----A  153 (183)
T ss_dssp             EE---TTHHHHHHHHHHTGGCCTTT-BTTSSSTHHHHHHHHHHHHHHHHHHHHHHHHTTTSEEEE-SSSHHHHHH----H
T ss_pred             EEEeeecchHHHHHHHHHHHHhCCccccccccCccHHHHHHhhHHHHHHHHHHHHHhCCCcEEEeccChHHHHHH----H
Confidence            997543            4444422          3456789999999999999999999999999999999974    4


Q ss_pred             HHHhCCCCCCCEEEeccchHHHHHHHHHHHhCC
Q 018512          173 FKKAGTYDPKKLLGVTMLDVVRANTFVAEVLGL  205 (354)
Q Consensus       173 ~~~~~~~p~~kviG~t~ld~~r~~~~la~~l~v  205 (354)
                      +.+.  +|..|++|+|+... .+...+|+.||+
T Consensus       154 ~~r~--~~~~k~vGlCh~~~-~~~~~la~~L~~  183 (183)
T PF02056_consen  154 LSRY--TPKIKVVGLCHGPQ-GTRRQLAKLLGM  183 (183)
T ss_dssp             HHHH--STTSEEEEE-SHHH-HHHHHHHHHHT-
T ss_pred             HHHh--CCCCCEEEECCCHH-HHHHHHHHHhCc
Confidence            4554  45579999998654 578999999874

2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 4 GH4 from CAZY comprises enzymes with several known activities; 6-phospho-beta-glucosidase (3.2.1.86 from EC); 6-phospho-alpha-glucosidase (3.2.1.122 from EC); alpha-galactosidase (3.2.1.22 from EC). 6-phospho-alpha-glucosidase requires both NAD(H) and divalent metal (Mn2+, Fe2+, Co2+, or Ni2+) for activity [].; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 1U8X_X 1S6Y_A 3FEF_B 1VJT_A 1UP4_A 1UP6_C 1UP7_E 1OBB_A.

>COG1004 Ugd Predicted UDP-glucose 6-dehydrogenase [Cell envelope biogenesis, outer membrane]

Probab=98.89  E-value=6.1e-08  Score=93.79  Aligned_cols=114  Identities=18%  Similarity=0.286  Sum_probs=82.2

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCch--------------hHHHHHh-cCCCCCeEEEEeCCCcHHhh
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP--------------GVTADIS-HMDTGAVVRGFLGQPQLENA  107 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~--------------g~~~dl~-~~~~~~~v~~~~~~~d~~~a  107 (354)
                      |||+|+|. |+||...+..|+..|+  +|+++|+++.+              |. .+|. +.....+++.   |+|+++|
T Consensus         1 MkI~viGt-GYVGLv~g~~lA~~GH--eVv~vDid~~KV~~ln~g~~PI~EpgL-e~ll~~~~~~gRl~f---Ttd~~~a   73 (414)
T COG1004           1 MKITVIGT-GYVGLVTGACLAELGH--EVVCVDIDESKVELLNKGISPIYEPGL-EELLKENLASGRLRF---TTDYEEA   73 (414)
T ss_pred             CceEEECC-chHHHHHHHHHHHcCC--eEEEEeCCHHHHHHHhCCCCCCcCccH-HHHHHhccccCcEEE---EcCHHHH
Confidence            89999998 9999999999999998  99999998621              11 1121 1111233554   5789999


Q ss_pred             hCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCC-eEEEE-ecCCCCCchHHH
Q 018512          108 LTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPN-ATVNL-ISNPVNSTVPIA  169 (354)
Q Consensus       108 l~~aDvVIi~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~-a~viv-~tNPv~~~~~~~  169 (354)
                      ++++|++|++.|.|.++. -     ..++..+...++.|.++.+. ++|++ .|-|++....+-
T Consensus        74 ~~~adv~fIavgTP~~~d-g-----~aDl~~V~ava~~i~~~~~~~~vvV~KSTVPvGt~~~v~  131 (414)
T COG1004          74 VKDADVVFIAVGTPPDED-G-----SADLSYVEAVAKDIGEILDGKAVVVIKSTVPVGTTEEVR  131 (414)
T ss_pred             HhcCCEEEEEcCCCCCCC-C-----CccHHHHHHHHHHHHhhcCCCeEEEEcCCCCCCchHHHH
Confidence            999999999999998762 1     22456777888888877765 43333 368998776543

>PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1

Probab=98.73  E-value=2.9e-08  Score=87.77  Aligned_cols=118  Identities=25%  Similarity=0.378  Sum_probs=75.7

Q ss_pred             eEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--c-h--hHHHH-Hh---c-CCC--------CCeEEEEeCCCcHH
Q 018512           44 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--T-P--GVTAD-IS---H-MDT--------GAVVRGFLGQPQLE  105 (354)
Q Consensus        44 kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~-~--g~~~d-l~---~-~~~--------~~~v~~~~~~~d~~  105 (354)
                      ||+|+|| |.+|..+|..++..|+  +|+|+|.++  . .  ....+ +.   + ...        ...++.   ++|++
T Consensus         1 ~V~ViGa-G~mG~~iA~~~a~~G~--~V~l~d~~~~~l~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~i~~---~~dl~   74 (180)
T PF02737_consen    1 KVAVIGA-GTMGRGIAALFARAGY--EVTLYDRSPEALERARKRIERLLDRLVRKGRLSQEEADAALARISF---TTDLE   74 (180)
T ss_dssp             EEEEES--SHHHHHHHHHHHHTTS--EEEEE-SSHHHHHHHHHHHHHHHHHHHHTTTTTHHHHHHHHHTEEE---ESSGG
T ss_pred             CEEEEcC-CHHHHHHHHHHHhCCC--cEEEEECChHHHHhhhhHHHHHHhhhhhhccchhhhhhhhhhhccc---ccCHH
Confidence            7999999 9999999999999998  999999987  1 1  11111 11   1 110        123443   35776


Q ss_pred             hhhCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecCCCCCchHHHHHHHHHhCCCCCCCE
Q 018512          106 NALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKL  184 (354)
Q Consensus       106 ~al~~aDvVIi~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~-p~a~viv~tNPv~~~~~~~~~~~~~~~~~p~~kv  184 (354)
                      ++. +||+||.+.              .++.+..+++...+.+.+ |++  |++||...+...   +. ..... .++|+
T Consensus        75 ~~~-~adlViEai--------------~E~l~~K~~~~~~l~~~~~~~~--ilasnTSsl~i~---~l-a~~~~-~p~R~  132 (180)
T PF02737_consen   75 EAV-DADLVIEAI--------------PEDLELKQELFAELDEICPPDT--ILASNTSSLSIS---EL-AAALS-RPERF  132 (180)
T ss_dssp             GGC-TESEEEE-S---------------SSHHHHHHHHHHHHCCS-TTS--EEEE--SSS-HH---HH-HTTSS-TGGGE
T ss_pred             HHh-hhheehhhc--------------cccHHHHHHHHHHHHHHhCCCc--eEEecCCCCCHH---HH-HhccC-cCceE
Confidence            655 999999984              557889999999999998 687  557887765542   21 22223 34678


Q ss_pred             EEecc
Q 018512          185 LGVTM  189 (354)
Q Consensus       185 iG~t~  189 (354)
                      +|+-.
T Consensus       133 ig~Hf  137 (180)
T PF02737_consen  133 IGMHF  137 (180)
T ss_dssp             EEEEE
T ss_pred             EEEec
Confidence            87743

1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B ....

>COG1250 FadB 3-hydroxyacyl-CoA dehydrogenase [Lipid metabolism]

Probab=98.72  E-value=5.9e-08  Score=92.18  Aligned_cols=122  Identities=23%  Similarity=0.307  Sum_probs=85.2

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC---chhH--HH----HHhcCC--C----CCeEEEEeCCCcHHh
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN---TPGV--TA----DISHMD--T----GAVVRGFLGQPQLEN  106 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~---~~g~--~~----dl~~~~--~----~~~v~~~~~~~d~~~  106 (354)
                      .+||+|||| |.+|+.+|..++..|+  +|+|+|+++   .++.  ..    .+....  .    ...+..+..++++ .
T Consensus         3 i~kv~ViGa-G~MG~gIA~~~A~~G~--~V~l~D~~~~~~~~~~~~i~~~l~k~~~~g~l~~~~~~~~l~~i~~~~~~-~   78 (307)
T COG1250           3 IKKVAVIGA-GVMGAGIAAVFALAGY--DVVLKDISPEALERALAYIEKNLEKLVEKGKLTEEEADAALARITPTTDL-A   78 (307)
T ss_pred             ccEEEEEcc-cchhHHHHHHHhhcCC--ceEEEeCCHHHHHHHHHHHHHHHHHHHhcCCCChhhHHHHHhhccccCch-h
Confidence            469999999 9999999999999667  999999986   1111  11    111111  0    1112223334565 4


Q ss_pred             hhCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecCCCCCchHHHHHHHHHhCCCCCCCEE
Q 018512          107 ALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLL  185 (354)
Q Consensus       107 al~~aDvVIi~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~-p~a~viv~tNPv~~~~~~~~~~~~~~~~~p~~kvi  185 (354)
                      ++++||+||.++              .+|.++.+++..++.+++ |++  |+.||.+.+...-++    ..... |+|++
T Consensus        79 ~l~~~DlVIEAv--------------~E~levK~~vf~~l~~~~~~~a--IlASNTSsl~it~ia----~~~~r-per~i  137 (307)
T COG1250          79 ALKDADLVIEAV--------------VEDLELKKQVFAELEALAKPDA--ILASNTSSLSITELA----EALKR-PERFI  137 (307)
T ss_pred             HhccCCEEEEec--------------cccHHHHHHHHHHHHhhcCCCc--EEeeccCCCCHHHHH----HHhCC-chhEE
Confidence            899999999983              778899999999999999 688  669999986654332    22233 46788


Q ss_pred             Eec
Q 018512          186 GVT  188 (354)
Q Consensus       186 G~t  188 (354)
                      |+-
T Consensus       138 G~H  140 (307)
T COG1250         138 GLH  140 (307)
T ss_pred             EEe
Confidence            873

>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones

Probab=98.66  E-value=1.8e-07  Score=88.39  Aligned_cols=111  Identities=19%  Similarity=0.280  Sum_probs=78.6

Q ss_pred             EEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEE-EeCCCcHHhhhCCCcEEEEcCCCCCCC
Q 018512           46 AILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRG-FLGQPQLENALTGMDLVIIPAGVPRKP  124 (354)
Q Consensus        46 ~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~-~~~~~d~~~al~~aDvVIi~ag~~~~~  124 (354)
                      .|+||+||+|++++..|+..+...+|..+|+........++........+.. +....++.+|++|+|+||++|+...-.
T Consensus         1 LVTGgsGflG~~iv~~Ll~~g~~~~Vr~~d~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~a~~g~d~V~H~Aa~~~~~   80 (280)
T PF01073_consen    1 LVTGGSGFLGSHIVRQLLERGYIYEVRVLDRSPPPKFLKDLQKSGVKEYIQGDITDPESLEEALEGVDVVFHTAAPVPPW   80 (280)
T ss_pred             CEEcCCcHHHHHHHHHHHHCCCceEEEEcccccccccchhhhcccceeEEEeccccHHHHHHHhcCCceEEEeCcccccc
Confidence            4899999999999999999986569999998762211122222221101122 223356789999999999998764444


Q ss_pred             C-CCHHHHHHHHHHHHHHHHHHHhhhCCCeEEE
Q 018512          125 G-MTRDDLFNINAGIVRTLCEGIAKCCPNATVN  156 (354)
Q Consensus       125 g-~~r~d~~~~n~~~~~~i~~~i~~~~p~a~vi  156 (354)
                      + .....+..-|+...+++++.+++.+.+.+|.
T Consensus        81 ~~~~~~~~~~vNV~GT~nvl~aa~~~~VkrlVy  113 (280)
T PF01073_consen   81 GDYPPEEYYKVNVDGTRNVLEAARKAGVKRLVY  113 (280)
T ss_pred             CcccHHHHHHHHHHHHHHHHHHHHHcCCCEEEE
Confidence            4 4566788999999999999999887665443

3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process

>PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=98.58  E-value=4.8e-07  Score=86.97  Aligned_cols=118  Identities=16%  Similarity=0.129  Sum_probs=81.5

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC-chhH-----HH---HHhcCCC-----CCeEEEEeCCCcHHhhh
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN-TPGV-----TA---DISHMDT-----GAVVRGFLGQPQLENAL  108 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~-~~g~-----~~---dl~~~~~-----~~~v~~~~~~~d~~~al  108 (354)
                      .||+|||+ |.+|+.+|..++..|+  +|+++|+++ ....     ..   .+.....     ...++.   ++++++++
T Consensus         8 ~~VaVIGa-G~MG~giA~~~a~aG~--~V~l~D~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~---~~~l~~av   81 (321)
T PRK07066          8 KTFAAIGS-GVIGSGWVARALAHGL--DVVAWDPAPGAEAALRANVANAWPALERQGLAPGASPARLRF---VATIEACV   81 (321)
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCC--eEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCChhhHHhhcee---cCCHHHHh
Confidence            58999999 9999999999999998  999999986 1110     00   1111100     112332   45788899


Q ss_pred             CCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCC-CeEEEEecCCCCCchHHHHHHHHHhCCCCCCCEEEe
Q 018512          109 TGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCP-NATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV  187 (354)
Q Consensus       109 ~~aDvVIi~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p-~a~viv~tNPv~~~~~~~~~~~~~~~~~p~~kviG~  187 (354)
                      ++||+||.+.              .+|.++.+++...+.+++| ++  |+.||.+.+...-+    ...... ++|++|+
T Consensus        82 ~~aDlViEav--------------pE~l~vK~~lf~~l~~~~~~~a--IlaSnTS~l~~s~l----a~~~~~-p~R~~g~  140 (321)
T PRK07066         82 ADADFIQESA--------------PEREALKLELHERISRAAKPDA--IIASSTSGLLPTDF----YARATH-PERCVVG  140 (321)
T ss_pred             cCCCEEEECC--------------cCCHHHHHHHHHHHHHhCCCCe--EEEECCCccCHHHH----HHhcCC-cccEEEE
Confidence            9999999984              4567788889999999985 55  66888887654322    222233 3678776

>PLN02166 dTDP-glucose 4,6-dehydratase

Probab=98.57  E-value=6.6e-07  Score=89.78  Aligned_cols=174  Identities=13%  Similarity=0.032  Sum_probs=101.4

Q ss_pred             CCCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcC
Q 018512           39 GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA  118 (354)
Q Consensus        39 ~~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~a  118 (354)
                      +.++|||.|+||+|++|++++..|+..|.  +|+.+|+... +....+.+....+.+..+. .+-+..++.++|+||++|
T Consensus       117 ~~~~mkILVTGatGFIGs~Lv~~Ll~~G~--~V~~ldr~~~-~~~~~~~~~~~~~~~~~~~-~Di~~~~~~~~D~ViHlA  192 (436)
T PLN02166        117 GRKRLRIVVTGGAGFVGSHLVDKLIGRGD--EVIVIDNFFT-GRKENLVHLFGNPRFELIR-HDVVEPILLEVDQIYHLA  192 (436)
T ss_pred             ccCCCEEEEECCccHHHHHHHHHHHHCCC--EEEEEeCCCC-ccHhHhhhhccCCceEEEE-CccccccccCCCEEEECc
Confidence            66779999999999999999999999887  9999997531 1101111111112233221 112234578999999998


Q ss_pred             CCCC--CCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecC-CCCCch--HHHHHHHHHh-CCCCCCCEEEeccchH
Q 018512          119 GVPR--KPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISN-PVNSTV--PIAAEVFKKA-GTYDPKKLLGVTMLDV  192 (354)
Q Consensus       119 g~~~--~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tN-Pv~~~~--~~~~~~~~~~-~~~p~~kviG~t~ld~  192 (354)
                      +...  ....+..+++..|+....++++.+++.+.  .+|++|. -+.-..  ....|-.+.. .-+.+...+|.+.+..
T Consensus       193 a~~~~~~~~~~p~~~~~~Nv~gT~nLleaa~~~g~--r~V~~SS~~VYg~~~~~p~~E~~~~~~~p~~p~s~Yg~SK~~a  270 (436)
T PLN02166        193 CPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA--RFLLTSTSEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTA  270 (436)
T ss_pred             eeccchhhccCHHHHHHHHHHHHHHHHHHHHHhCC--EEEEECcHHHhCCCCCCCCCccccccCCCCCCCCchHHHHHHH
Confidence            7532  12234567788999999999999998763  4554432 111000  0000000000 0112234566666556


Q ss_pred             HHHHHHHHHHhCCCCCCCc-ceEEeec
Q 018512          193 VRANTFVAEVLGLDPRDVD-VPVVGGH  218 (354)
Q Consensus       193 ~r~~~~la~~l~v~~~~v~-~~v~G~h  218 (354)
                      .++...+++..+++..-++ ..++|.+
T Consensus       271 E~~~~~y~~~~~l~~~ilR~~~vYGp~  297 (436)
T PLN02166        271 ETLAMDYHRGAGVEVRIARIFNTYGPR  297 (436)
T ss_pred             HHHHHHHHHHhCCCeEEEEEccccCCC
Confidence            6665556666676544443 3567754

>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=98.56  E-value=1e-06  Score=88.78  Aligned_cols=166  Identities=19%  Similarity=0.222  Sum_probs=111.7

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCCCCeEEEEeC----CCcHHhhhCC--CcE
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLG----QPQLENALTG--MDL  113 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~~~~v~~~~~----~~d~~~al~~--aDv  113 (354)
                      .++|.|+||+|++|+.++..++..++ .+|+++|.++  ......++.+......++.+.+    ...++.++++  .|+
T Consensus       250 gK~vLVTGagGSiGsel~~qil~~~p-~~i~l~~~~E~~~~~i~~el~~~~~~~~~~~~igdVrD~~~~~~~~~~~kvd~  328 (588)
T COG1086         250 GKTVLVTGGGGSIGSELCRQILKFNP-KEIILFSRDEYKLYLIDMELREKFPELKLRFYIGDVRDRDRVERAMEGHKVDI  328 (588)
T ss_pred             CCEEEEeCCCCcHHHHHHHHHHhcCC-CEEEEecCchHHHHHHHHHHHhhCCCcceEEEecccccHHHHHHHHhcCCCce
Confidence            46899999999999999999988765 4999999998  3444455554311223333222    2335688899  999


Q ss_pred             EEEcCCCCCCCCCC--HHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec----CCCCCchHHHHHHHHHhCCCCCCCEEEe
Q 018512          114 VIIPAGVPRKPGMT--RDDLFNINAGIVRTLCEGIAKCCPNATVNLIS----NPVNSTVPIAAEVFKKAGTYDPKKLLGV  187 (354)
Q Consensus       114 VIi~ag~~~~~g~~--r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~t----NPv~~~~~~~~~~~~~~~~~p~~kviG~  187 (354)
                      |+++|....-|-.+  -.+-+..|+-..+++++...+++-+.+|.+.|    ||.+++                    |.
T Consensus       329 VfHAAA~KHVPl~E~nP~Eai~tNV~GT~nv~~aa~~~~V~~~V~iSTDKAV~PtNvm--------------------Ga  388 (588)
T COG1086         329 VFHAAALKHVPLVEYNPEEAIKTNVLGTENVAEAAIKNGVKKFVLISTDKAVNPTNVM--------------------GA  388 (588)
T ss_pred             EEEhhhhccCcchhcCHHHHHHHhhHhHHHHHHHHHHhCCCEEEEEecCcccCCchHh--------------------hH
Confidence            99999877666543  46778999999999999999999888888876    555554                    33


Q ss_pred             ccchHHHHHHHHHHHhCCCCCC---C-cceEEeecCCcccccccccc
Q 018512          188 TMLDVVRANTFVAEVLGLDPRD---V-DVPVVGGHAGVTILPLLSQV  230 (354)
Q Consensus       188 t~ld~~r~~~~la~~l~v~~~~---v-~~~v~G~hg~~~~vp~~s~~  230 (354)
                      |..-...+-..+++..+-....   | .+-|+|..|+  .+|+|.+.
T Consensus       389 TKr~aE~~~~a~~~~~~~~~T~f~~VRFGNVlGSrGS--ViPlFk~Q  433 (588)
T COG1086         389 TKRLAEKLFQAANRNVSGTGTRFCVVRFGNVLGSRGS--VIPLFKKQ  433 (588)
T ss_pred             HHHHHHHHHHHHhhccCCCCcEEEEEEecceecCCCC--CHHHHHHH
Confidence            3222222222222211111122   2 4578998885  89998864

>PRK07819 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=98.52  E-value=9.4e-07  Score=83.82  Aligned_cols=119  Identities=19%  Similarity=0.277  Sum_probs=80.9

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--c-hhH--HH----HHhcCCC---------CCeEEEEeCCCcH
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--T-PGV--TA----DISHMDT---------GAVVRGFLGQPQL  104 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~-~g~--~~----dl~~~~~---------~~~v~~~~~~~d~  104 (354)
                      .||+|||+ |.+|..+|..++..|+  +|+|+|+++  . .+.  ..    .+.+...         ...++   .++++
T Consensus         6 ~~V~ViGa-G~mG~~iA~~~a~~G~--~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~l~---~~~~~   79 (286)
T PRK07819          6 QRVGVVGA-GQMGAGIAEVCARAGV--DVLVFETTEELATAGRNRIEKSLERAVSRGKLTERERDAALARLR---FTTDL   79 (286)
T ss_pred             cEEEEEcc-cHHHHHHHHHHHhCCC--EEEEEECCHHHHHHHHHHHHHHHHHHHhcccCChhhHHHHHhCeE---eeCCH
Confidence            48999999 9999999999999998  999999987  1 111  11    1111110         01233   24576


Q ss_pred             HhhhCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhC--CCeEEEEecCCCCCchHHHHHHHHHhCCCCCC
Q 018512          105 ENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC--PNATVNLISNPVNSTVPIAAEVFKKAGTYDPK  182 (354)
Q Consensus       105 ~~al~~aDvVIi~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~--p~a~viv~tNPv~~~~~~~~~~~~~~~~~p~~  182 (354)
                       +++++||+||.+.              .++.++.+++...+.+.+  |++  |++||........+    ...... +.
T Consensus        80 -~~~~~~d~ViEav--------------~E~~~~K~~l~~~l~~~~~~~~~--il~snTS~~~~~~l----a~~~~~-~~  137 (286)
T PRK07819         80 -GDFADRQLVIEAV--------------VEDEAVKTEIFAELDKVVTDPDA--VLASNTSSIPIMKL----AAATKR-PG  137 (286)
T ss_pred             -HHhCCCCEEEEec--------------ccCHHHHHHHHHHHHHhhCCCCc--EEEECCCCCCHHHH----HhhcCC-Cc
Confidence             6799999999983              567788888999999997  466  44788777554322    233334 35


Q ss_pred             CEEEecc
Q 018512          183 KLLGVTM  189 (354)
Q Consensus       183 kviG~t~  189 (354)
                      |++|+-.
T Consensus       138 r~~g~hf  144 (286)
T PRK07819        138 RVLGLHF  144 (286)
T ss_pred             cEEEEec
Confidence            7877743

>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional

Probab=98.52  E-value=2.4e-06  Score=82.95  Aligned_cols=174  Identities=15%  Similarity=0.025  Sum_probs=103.1

Q ss_pred             CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc--hhHHHHHh-cCC--CCCeEEEEeC----CCcHHhhhCCC
Q 018512           41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADIS-HMD--TGAVVRGFLG----QPQLENALTGM  111 (354)
Q Consensus        41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~--~g~~~dl~-~~~--~~~~v~~~~~----~~d~~~al~~a  111 (354)
                      +++||.|+||+|++|++++..|+..+.  +|+.+|+...  .....++. ...  ....+..+..    ..++.+.++++
T Consensus        14 ~~~~vlVtGatGfiG~~lv~~L~~~g~--~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~~~~~~   91 (348)
T PRK15181         14 APKRWLITGVAGFIGSGLLEELLFLNQ--TVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIRKFTDCQKACKNV   91 (348)
T ss_pred             cCCEEEEECCccHHHHHHHHHHHHCCC--EEEEEeCCCCcchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhhCC
Confidence            457999999999999999999999887  8999998541  11111111 000  0112222211    12345668999


Q ss_pred             cEEEEcCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCCchHHHHHHHHHhCCCCCCCEEEecc
Q 018512          112 DLVIIPAGVPRKP--GMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTM  189 (354)
Q Consensus       112 DvVIi~ag~~~~~--g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~~~~~~~~~~p~~kviG~t~  189 (354)
                      |+||++|+....+  .....+....|+....++.+.+++.+.+-+|...|--+.-...  ...........+...+|.+.
T Consensus        92 d~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~v~~SS~~vyg~~~--~~~~~e~~~~~p~~~Y~~sK  169 (348)
T PRK15181         92 DYVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDAHVSSFTYAASSSTYGDHP--DLPKIEERIGRPLSPYAVTK  169 (348)
T ss_pred             CEEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeechHhhCCCC--CCCCCCCCCCCCCChhhHHH
Confidence            9999998864322  1234556789999999999999987655444333210100000  00000111122345677776


Q ss_pred             chHHHHHHHHHHHhCCCCCCCc-ceEEeec
Q 018512          190 LDVVRANTFVAEVLGLDPRDVD-VPVVGGH  218 (354)
Q Consensus       190 ld~~r~~~~la~~l~v~~~~v~-~~v~G~h  218 (354)
                      +...++...+++..|++...++ +.++|.+
T Consensus       170 ~~~e~~~~~~~~~~~~~~~~lR~~~vyGp~  199 (348)
T PRK15181        170 YVNELYADVFARSYEFNAIGLRYFNVFGRR  199 (348)
T ss_pred             HHHHHHHHHHHHHhCCCEEEEEecceeCcC
Confidence            6666666666777788766664 5788865

>PF03721 UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; InterPro: IPR001732 The UDP-glucose/GDP-mannose dehydrogenases are a small group of enzymes which possesses the ability to catalyse the NAD-dependent 2-fold oxidation of an alcohol to an acid without the release of an aldehyde intermediate [, ]

Probab=98.50  E-value=3.4e-07  Score=81.36  Aligned_cols=123  Identities=20%  Similarity=0.282  Sum_probs=72.8

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcC----------------CCCCeEEEEeCCCcHHh
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHM----------------DTGAVVRGFLGQPQLEN  106 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~----------------~~~~~v~~~~~~~d~~~  106 (354)
                      |||+|||. |+||..+|..|+..|+  +|+.+|+++.  .+..++..                .....++.   ++|.++
T Consensus         1 M~I~ViGl-GyvGl~~A~~lA~~G~--~V~g~D~~~~--~v~~l~~g~~p~~E~~l~~ll~~~~~~~~l~~---t~~~~~   72 (185)
T PF03721_consen    1 MKIAVIGL-GYVGLPLAAALAEKGH--QVIGVDIDEE--KVEALNNGELPIYEPGLDELLKENVSAGRLRA---TTDIEE   72 (185)
T ss_dssp             -EEEEE---STTHHHHHHHHHHTTS--EEEEE-S-HH--HHHHHHTTSSSS-CTTHHHHHHHHHHTTSEEE---ESEHHH
T ss_pred             CEEEEECC-CcchHHHHHHHHhCCC--EEEEEeCChH--HHHHHhhccccccccchhhhhccccccccchh---hhhhhh
Confidence            89999999 9999999999999998  9999999861  11112211                01234554   357788


Q ss_pred             hhCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEe-cCCCCCchHHHHHHHHHhCCC
Q 018512          107 ALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLI-SNPVNSTVPIAAEVFKKAGTY  179 (354)
Q Consensus       107 al~~aDvVIi~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~-p~a~viv~-tNPv~~~~~~~~~~~~~~~~~  179 (354)
                      ++++||++|++.+.|...+.+      -+...+.+.++.|.++. ++.+|++= |-|++..-.++...+.+.++.
T Consensus        73 ai~~adv~~I~VpTP~~~~~~------~Dls~v~~a~~~i~~~l~~~~lvV~~STvppGtt~~~~~~ile~~~~~  141 (185)
T PF03721_consen   73 AIKDADVVFICVPTPSDEDGS------PDLSYVESAIESIAPVLRPGDLVVIESTVPPGTTEELLKPILEKRSGK  141 (185)
T ss_dssp             HHHH-SEEEE----EBETTTS------BETHHHHHHHHHHHHHHCSCEEEEESSSSSTTHHHHHHHHHHHHHCCT
T ss_pred             hhhccceEEEecCCCccccCC------ccHHHHHHHHHHHHHHHhhcceEEEccEEEEeeehHhhhhhhhhhccc
Confidence            899999999999888655321      12234455555555544 34544443 688888765555556666553

The enzymes have a wide range of functions. In plants UDP-glucose dehydrogenase, 1.1.1.22 from EC, is an important enzyme in the synthesis of hemicellulose and pectin [], which are the components of newly formed cell walls; while in zebrafish UDP-glucose dehydrogenase is required for cardiac valve formation []. In Xanthomonas campestris, a plant pathogen, UDP-glucose dehydrogenase is required for virulence []. GDP-mannose dehydrogenase, 1.1.1.132 from EC, catalyses the formation of GDP-mannuronic acid, which is the monomeric unit from which the exopolysaccharide alginate is formed. Alginate is secreted by a number of bacteria, which include Pseudomonas aeruginosa and Azotobacter vinelandii. In P. aeruginosa, alginate is believed to play an important role in the bacteria's resistance to antibiotics and the host immune response [], while in A. vinelandii it is essential for the encystment process []. This entry represents the N-terminal NAD(+)-binding domain. Structural studies indicate that this domain forms an alpha-beta structure containing the six-stranded parallel beta sheet characteristic of the dinucleotide binding Rossman fold [, ].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0055114 oxidation-reduction process; PDB: 3OJO_A 3OJL_A 1MV8_B 1MUU_A 1MFZ_C 3GG2_D 1DLJ_A 1DLI_A 3G79_B 2Y0E_D ....

>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases

Probab=98.50  E-value=6.2e-08  Score=91.31  Aligned_cols=120  Identities=20%  Similarity=0.202  Sum_probs=75.9

Q ss_pred             EEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCCCCeEE----EEeC----CCcHHhhhC--CCc
Q 018512           45 VAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVR----GFLG----QPQLENALT--GMD  112 (354)
Q Consensus        45 I~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~~~~v~----~~~~----~~d~~~al~--~aD  112 (354)
                      |.|+||+|++|+.++..|+..++ .+|+++|+++  ......++........++    .+.+    ...+..+++  +.|
T Consensus         1 VLVTGa~GSIGseL~rql~~~~p-~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~~~l~~~~~~~~pd   79 (293)
T PF02719_consen    1 VLVTGAGGSIGSELVRQLLRYGP-KKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVRDKERLNRIFEEYKPD   79 (293)
T ss_dssp             EEEETTTSHHHHHHHHHHHCCB--SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCCHHHHHHHHTT--T-S
T ss_pred             CEEEccccHHHHHHHHHHHhcCC-CeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeecccCHHHHHHHHhhcCCC
Confidence            68999999999999999998876 4899999987  344445553111111121    1111    122456778  999


Q ss_pred             EEEEcCCCCCCCC--CCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec----CCCCCc
Q 018512          113 LVIIPAGVPRKPG--MTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS----NPVNST  165 (354)
Q Consensus       113 vVIi~ag~~~~~g--~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~t----NPv~~~  165 (354)
                      +|+++|+...-+-  ....+.+..|+-..+++++...+++.+.+|.+.|    ||++++
T Consensus        80 iVfHaAA~KhVpl~E~~p~eav~tNv~GT~nv~~aa~~~~v~~~v~ISTDKAv~Ptnvm  138 (293)
T PF02719_consen   80 IVFHAAALKHVPLMEDNPFEAVKTNVLGTQNVAEAAIEHGVERFVFISTDKAVNPTNVM  138 (293)
T ss_dssp             EEEE------HHHHCCCHHHHHHHHCHHHHHHHHHHHHTT-SEEEEEEECGCSS--SHH
T ss_pred             EEEEChhcCCCChHHhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEccccccCCCCcHH
Confidence            9999998654321  2356778999999999999999999888888876    566555

The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.

>TIGR02441 fa_ox_alpha_mit fatty acid oxidation complex, alpha subunit, mitochondrial

Probab=98.46  E-value=6.3e-07  Score=95.29  Aligned_cols=119  Identities=18%  Similarity=0.227  Sum_probs=84.2

Q ss_pred             CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC---chhH--HHH-H----hcCC-C-------CCeEEEEeCCC
Q 018512           41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN---TPGV--TAD-I----SHMD-T-------GAVVRGFLGQP  102 (354)
Q Consensus        41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~---~~g~--~~d-l----~~~~-~-------~~~v~~~~~~~  102 (354)
                      +..||+|||| |.+|..+|..++..|+  +|+|+|+++   .++.  ..+ +    .... .       ...++.   ++
T Consensus       334 ~i~~v~ViGa-G~MG~gIA~~~a~~G~--~V~l~d~~~~~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~---~~  407 (737)
T TIGR02441       334 PVKTLAVLGA-GLMGAGIAQVSVDKGL--KTVLKDATPAGLDRGQQQVFKGLNKKVKRKKITSLERDSILSNLTP---TL  407 (737)
T ss_pred             cccEEEEECC-CHhHHHHHHHHHhCCC--cEEEecCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhCeEE---eC
Confidence            4468999999 9999999999999998  999999987   1211  111 1    1110 0       122333   45


Q ss_pred             cHHhhhCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecCCCCCchHHHHHHHHHhCCCCC
Q 018512          103 QLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNSTVPIAAEVFKKAGTYDP  181 (354)
Q Consensus       103 d~~~al~~aDvVIi~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~-p~a~viv~tNPv~~~~~~~~~~~~~~~~~p~  181 (354)
                      |+ +++++||+||.+.              .+|.++.+++..++.+++ |++  |++||.+.+-..-++    ..... |
T Consensus       408 ~~-~~~~~aDlViEAv--------------~E~l~~K~~vf~~l~~~~~~~~--ilasNTSsl~i~~la----~~~~~-p  465 (737)
T TIGR02441       408 DY-SGFKNADMVIEAV--------------FEDLSLKHKVIKEVEAVVPPHC--IIASNTSALPIKDIA----AVSSR-P  465 (737)
T ss_pred             CH-HHhccCCeehhhc--------------cccHHHHHHHHHHHHhhCCCCc--EEEEcCCCCCHHHHH----hhcCC-c
Confidence            76 6799999999983              678899999999999999 576  558999886653322    22333 4


Q ss_pred             CCEEEe
Q 018512          182 KKLLGV  187 (354)
Q Consensus       182 ~kviG~  187 (354)
                      +|++|+
T Consensus       466 ~r~ig~  471 (737)
T TIGR02441       466 EKVIGM  471 (737)
T ss_pred             cceEEE
Confidence            688887

Members represent alpha subunit of mitochondrial multifunctional fatty acid degradation enzyme complex. Subunit activities include: enoyl-CoA hydratase (EC 4.2.1.17) & 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35). Some characterization in human, pig, and rat. The beta subunit has activity: acetyl-CoA C-acyltransferase (EC 2.3.1.16).

>TIGR02437 FadB fatty oxidation complex, alpha subunit FadB

Probab=98.44  E-value=8e-07  Score=94.26  Aligned_cols=121  Identities=18%  Similarity=0.205  Sum_probs=85.2

Q ss_pred             CCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC---chhH--HHH----H-hcCC-C-------CCeEEEEeCC
Q 018512           40 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN---TPGV--TAD----I-SHMD-T-------GAVVRGFLGQ  101 (354)
Q Consensus        40 ~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~---~~g~--~~d----l-~~~~-~-------~~~v~~~~~~  101 (354)
                      .+..||+|||| |.+|..+|..++..|+  +|+|+|.++   .++.  +.+    + .+.. .       ...++   .+
T Consensus       311 ~~i~~v~ViGa-G~mG~gIA~~~a~~G~--~V~l~d~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~---~~  384 (714)
T TIGR02437       311 KDVKQAAVLGA-GIMGGGIAYQSASKGT--PIVMKDINQHSLDLGLTEAAKLLNKQVERGRITPAKMAGVLNGIT---PT  384 (714)
T ss_pred             cccceEEEECC-chHHHHHHHHHHhCCC--eEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhHHHHHhCeE---Ee
Confidence            34569999999 9999999999999998  999999986   1111  111    1 1110 0       11233   34


Q ss_pred             CcHHhhhCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecCCCCCchHHHHHHHHHhCCCC
Q 018512          102 PQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNSTVPIAAEVFKKAGTYD  180 (354)
Q Consensus       102 ~d~~~al~~aDvVIi~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~-p~a~viv~tNPv~~~~~~~~~~~~~~~~~p  180 (354)
                      +++ +++++||+||.+.              .+++++.+++..++.+.+ |++  |++||.+.+...-+    ...... 
T Consensus       385 ~~~-~~~~~aDlViEav--------------~E~l~~K~~vf~~l~~~~~~~~--ilasnTS~l~i~~i----a~~~~~-  442 (714)
T TIGR02437       385 LSY-AGFDNVDIVVEAV--------------VENPKVKAAVLAEVEQHVREDA--ILASNTSTISISLL----AKALKR-  442 (714)
T ss_pred             CCH-HHhcCCCEEEEcC--------------cccHHHHHHHHHHHHhhCCCCc--EEEECCCCCCHHHH----HhhcCC-
Confidence            576 6799999999984              567889999999999999 576  56899988665322    222333 


Q ss_pred             CCCEEEec
Q 018512          181 PKKLLGVT  188 (354)
Q Consensus       181 ~~kviG~t  188 (354)
                      |+|++|+-
T Consensus       443 p~r~ig~H  450 (714)
T TIGR02437       443 PENFCGMH  450 (714)
T ss_pred             cccEEEEe
Confidence            56888884

Members represent alpha subunit of multifunctional enzyme complex of the fatty acid degradation cycle. Activities include: enoyl-CoA hydratase (EC 4.2.1.17), dodecenoyl-CoA delta-isomerase activity (EC 5.3.3.8), 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35), 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3). A representative is E. coli FadB. This model excludes the FadJ family represented by SP:P77399.

>PRK11730 fadB multifunctional fatty acid oxidation complex subunit alpha; Reviewed

Probab=98.44  E-value=1.3e-06  Score=92.68  Aligned_cols=119  Identities=18%  Similarity=0.218  Sum_probs=83.9

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--c-hhH--HH----HHh-cCCC--------CCeEEEEeCCCc
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--T-PGV--TA----DIS-HMDT--------GAVVRGFLGQPQ  103 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~-~g~--~~----dl~-~~~~--------~~~v~~~~~~~d  103 (354)
                      ..||+|||| |.+|..+|..++..|+  +|+|+|+++  + .+.  ..    .+. +...        ...++.   ++|
T Consensus       313 i~~v~ViGa-G~mG~gIA~~~a~~G~--~V~l~d~~~~~l~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~i~~---~~~  386 (715)
T PRK11730        313 VKQAAVLGA-GIMGGGIAYQSASKGV--PVIMKDINQKALDLGMTEAAKLLNKQVERGKIDGAKMAGVLSSIRP---TLD  386 (715)
T ss_pred             cceEEEECC-chhHHHHHHHHHhCCC--eEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhHHHHHhCeEE---eCC
Confidence            358999999 9999999999999998  999999986  1 111  11    111 1100        122333   457


Q ss_pred             HHhhhCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCC-CeEEEEecCCCCCchHHHHHHHHHhCCCCCC
Q 018512          104 LENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCP-NATVNLISNPVNSTVPIAAEVFKKAGTYDPK  182 (354)
Q Consensus       104 ~~~al~~aDvVIi~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p-~a~viv~tNPv~~~~~~~~~~~~~~~~~p~~  182 (354)
                      + +++++||+||.+.              .+++++.+++..++.+++| ++  |++||.+.+-..-++    ..... +.
T Consensus       387 ~-~~~~~aDlViEav--------------~E~l~~K~~vf~~l~~~~~~~~--ilasNTSsl~i~~la----~~~~~-p~  444 (715)
T PRK11730        387 Y-AGFERVDVVVEAV--------------VENPKVKAAVLAEVEQKVREDT--ILASNTSTISISLLA----KALKR-PE  444 (715)
T ss_pred             H-HHhcCCCEEEecc--------------cCcHHHHHHHHHHHHhhCCCCc--EEEEcCCCCCHHHHH----hhcCC-Cc
Confidence            6 6799999999983              6678899999999999995 66  558999886543222    23333 46


Q ss_pred             CEEEec
Q 018512          183 KLLGVT  188 (354)
Q Consensus       183 kviG~t  188 (354)
                      |++|+-
T Consensus       445 r~~g~H  450 (715)
T PRK11730        445 NFCGMH  450 (715)
T ss_pred             cEEEEe
Confidence            888873

>TIGR01915 npdG NADPH-dependent F420 reductase

Probab=98.43  E-value=4e-06  Score=76.32  Aligned_cols=102  Identities=19%  Similarity=0.124  Sum_probs=62.8

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCC-C-CCeEEEEeCCCcHHhhhCCCcEEEEcC
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMD-T-GAVVRGFLGQPQLENALTGMDLVIIPA  118 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~-~-~~~v~~~~~~~d~~~al~~aDvVIi~a  118 (354)
                      |||+|||++|++|++++..|...++  +|.++|+++  ......+..+.. . ....+...  .+..++++++|+||++.
T Consensus         1 MkI~IIGG~G~mG~ala~~L~~~G~--~V~v~~r~~~~~~~l~~~~~~~~~~~g~~~~~~~--~~~~ea~~~aDvVilav   76 (219)
T TIGR01915         1 MKIAVLGGTGDQGKGLALRLAKAGN--KIIIGSRDLEKAEEAAAKALEELGHGGSDIKVTG--ADNAEAAKRADVVILAV   76 (219)
T ss_pred             CEEEEEcCCCHHHHHHHHHHHhCCC--EEEEEEcCHHHHHHHHHHHHhhccccCCCceEEE--eChHHHHhcCCEEEEEC
Confidence            7999998449999999999999886  899999876  222222222111 0 01111111  23367899999999985


Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCC
Q 018512          119 GVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNS  164 (354)
Q Consensus       119 g~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv~~  164 (354)
                      ..                ..+.++++.+...-.+.+||-++||...
T Consensus        77 p~----------------~~~~~~l~~l~~~l~~~vvI~~~ngi~~  106 (219)
T TIGR01915        77 PW----------------DHVLKTLESLRDELSGKLVISPVVPLAS  106 (219)
T ss_pred             CH----------------HHHHHHHHHHHHhccCCEEEEeccCcee
Confidence            21                1223333344433334577778899875

This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.

>KOG2304 consensus 3-hydroxyacyl-CoA dehydrogenase [Lipid transport and metabolism]

Probab=98.40  E-value=2.9e-07  Score=82.56  Aligned_cols=124  Identities=23%  Similarity=0.336  Sum_probs=86.9

Q ss_pred             CCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC---c---hhHHHHHhcCC-----CCC---------eEEEEe
Q 018512           40 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN---T---PGVTADISHMD-----TGA---------VVRGFL   99 (354)
Q Consensus        40 ~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~---~---~g~~~dl~~~~-----~~~---------~v~~~~   99 (354)
                      .+...|+|+|| |.+|+.+|+..+..|+  .|.|+|.++   .   ++....+.+..     ..+         .+..+.
T Consensus         9 ~~~~~V~ivGa-G~MGSGIAQv~a~sg~--~V~l~d~~~~aL~~A~~~I~~sl~rvakKk~~~~~~~~~e~v~~~l~ri~   85 (298)
T KOG2304|consen    9 AEIKNVAIVGA-GQMGSGIAQVAATSGL--NVWLVDANEDALSRATKAISSSLKRVAKKKKADDPVALEEFVDDTLDRIK   85 (298)
T ss_pred             ccccceEEEcc-cccchhHHHHHHhcCC--ceEEecCCHHHHHHHHHHHHHHHHHHHhhcccCChhhHHHHHHHHHHHHH
Confidence            34458999999 9999999999999999  999999987   1   22222222211     000         011112


Q ss_pred             CCCcHHhhhCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCC-CeEEEEecCCCCCch-HHHHHHHHHhC
Q 018512          100 GQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCP-NATVNLISNPVNSTV-PIAAEVFKKAG  177 (354)
Q Consensus       100 ~~~d~~~al~~aDvVIi~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p-~a~viv~tNPv~~~~-~~~~~~~~~~~  177 (354)
                      .+++.+.++.+||+||.+              +.+|+.+.+++.+.+.+.|+ ++  |..||...+.- .++     ...
T Consensus        86 ~~tnv~~~v~dadliiEA--------------ivEn~diK~~lF~~l~~~ak~~~--il~tNTSSl~lt~ia-----~~~  144 (298)
T KOG2304|consen   86 TSTNVSDAVSDADLIIEA--------------IVENLDIKRKLFKDLDKIAKSST--ILATNTSSLSLTDIA-----SAT  144 (298)
T ss_pred             HcCCHHHhhhhhHHHHHH--------------HHHhHHHHHHHHHHHHhhcccce--EEeecccceeHHHHH-----hhc
Confidence            246788899999998887              58999999999999999996 55  55799887543 222     221


Q ss_pred             CCCCCCEEEec
Q 018512          178 TYDPKKLLGVT  188 (354)
Q Consensus       178 ~~p~~kviG~t  188 (354)
                       -.+.|+.|+-
T Consensus       145 -~~~srf~GlH  154 (298)
T KOG2304|consen  145 -QRPSRFAGLH  154 (298)
T ss_pred             -cChhhhceee
Confidence             2456888985

>PLN02427 UDP-apiose/xylose synthase

Probab=98.40  E-value=3.6e-06  Score=82.90  Aligned_cols=115  Identities=17%  Similarity=0.094  Sum_probs=74.7

Q ss_pred             CCCCCeEEEEcCCCchHHHHHHHHHhCC-CCcEEEEEecCCchhHHHHHhcCC---CCCeEEEE----eCCCcHHhhhCC
Q 018512           39 GAAGFKVAILGAAGGIGQPLAMLMKINP-LVSVLHLYDVVNTPGVTADISHMD---TGAVVRGF----LGQPQLENALTG  110 (354)
Q Consensus        39 ~~~~~kI~IiGa~G~vG~~~a~~l~~~~-~~~ei~L~D~~~~~g~~~dl~~~~---~~~~v~~~----~~~~d~~~al~~  110 (354)
                      +.++|||.|+||+|++|++++..|+.++ .  +|+.+|++...  ...+....   ....++.+    ....++.+++++
T Consensus        11 ~~~~~~VlVTGgtGfIGs~lv~~L~~~~g~--~V~~l~r~~~~--~~~l~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~   86 (386)
T PLN02427         11 PIKPLTICMIGAGGFIGSHLCEKLMTETPH--KVLALDVYNDK--IKHLLEPDTVPWSGRIQFHRINIKHDSRLEGLIKM   86 (386)
T ss_pred             cccCcEEEEECCcchHHHHHHHHHHhcCCC--EEEEEecCchh--hhhhhccccccCCCCeEEEEcCCCChHHHHHHhhc
Confidence            5677899999999999999999999874 6  89999975421  11111110   01122222    112345678889


Q ss_pred             CcEEEEcCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 018512          111 MDLVIIPAGVPRKP--GMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  159 (354)
Q Consensus       111 aDvVIi~ag~~~~~--g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~t  159 (354)
                      +|+||++|+.....  .....+.+..|+....++++.+++.+ . .+|.+|
T Consensus        87 ~d~ViHlAa~~~~~~~~~~~~~~~~~n~~gt~~ll~aa~~~~-~-r~v~~S  135 (386)
T PLN02427         87 ADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN-K-RLIHFS  135 (386)
T ss_pred             CCEEEEcccccChhhhhhChHHHHHHHHHHHHHHHHHHHhcC-C-EEEEEe
Confidence            99999999854321  12234556788888889999888765 3 445444

>PRK11154 fadJ multifunctional fatty acid oxidation complex subunit alpha; Reviewed

Probab=98.39  E-value=9.2e-07  Score=93.84  Aligned_cols=120  Identities=19%  Similarity=0.321  Sum_probs=84.1

Q ss_pred             CCCeEEEEcCCCchHHHHHHHHH-hCCCCcEEEEEecCC---chh--HHHHH-----hcCC-C-------CCeEEEEeCC
Q 018512           41 AGFKVAILGAAGGIGQPLAMLMK-INPLVSVLHLYDVVN---TPG--VTADI-----SHMD-T-------GAVVRGFLGQ  101 (354)
Q Consensus        41 ~~~kI~IiGa~G~vG~~~a~~l~-~~~~~~ei~L~D~~~---~~g--~~~dl-----~~~~-~-------~~~v~~~~~~  101 (354)
                      +-.||+|||| |.+|..+|..++ ..|+  +|+|+|.++   ..+  .+.+.     .+.. .       ...++.   +
T Consensus       308 ~i~~v~ViGa-G~mG~giA~~~a~~~G~--~V~l~d~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~---~  381 (708)
T PRK11154        308 PVNKVGVLGG-GLMGGGIAYVTATKAGL--PVRIKDINPQGINHALKYSWDLLDKKVKRRHLKPSERDKQMALISG---T  381 (708)
T ss_pred             cccEEEEECC-chhhHHHHHHHHHHcCC--eEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhcEEE---e
Confidence            3468999999 999999999998 7788  999999986   111  11111     1110 0       123443   4


Q ss_pred             CcHHhhhCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecCCCCCchHHHHHHHHHhCCCC
Q 018512          102 PQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNSTVPIAAEVFKKAGTYD  180 (354)
Q Consensus       102 ~d~~~al~~aDvVIi~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~-p~a~viv~tNPv~~~~~~~~~~~~~~~~~p  180 (354)
                      +++ +++++||+||.+.              .+|.++.+++...+.+++ |++  |++||...+...-++    ..... 
T Consensus       382 ~~~-~~~~~aDlViEav--------------~E~~~~K~~v~~~le~~~~~~~--ilasnTS~l~i~~la----~~~~~-  439 (708)
T PRK11154        382 TDY-RGFKHADVVIEAV--------------FEDLALKQQMVAEVEQNCAPHT--IFASNTSSLPIGQIA----AAAAR-  439 (708)
T ss_pred             CCh-HHhccCCEEeecc--------------cccHHHHHHHHHHHHhhCCCCc--EEEECCCCCCHHHHH----HhcCc-
Confidence            576 6899999999983              678899999999999998 677  558999886653322    22233 


Q ss_pred             CCCEEEec
Q 018512          181 PKKLLGVT  188 (354)
Q Consensus       181 ~~kviG~t  188 (354)
                      +.|++|+-
T Consensus       440 p~r~ig~H  447 (708)
T PRK11154        440 PEQVIGLH  447 (708)
T ss_pred             ccceEEEe
Confidence            46888873

>TIGR02440 FadJ fatty oxidation complex, alpha subunit FadJ

Probab=98.39  E-value=2.7e-06  Score=90.15  Aligned_cols=120  Identities=19%  Similarity=0.298  Sum_probs=82.9

Q ss_pred             CCCeEEEEcCCCchHHHHHHHHHh-CCCCcEEEEEecCC--c-hhH--HH-HHhc----CC-C-------CCeEEEEeCC
Q 018512           41 AGFKVAILGAAGGIGQPLAMLMKI-NPLVSVLHLYDVVN--T-PGV--TA-DISH----MD-T-------GAVVRGFLGQ  101 (354)
Q Consensus        41 ~~~kI~IiGa~G~vG~~~a~~l~~-~~~~~ei~L~D~~~--~-~g~--~~-dl~~----~~-~-------~~~v~~~~~~  101 (354)
                      +..||+|||| |.+|+.+|..++. .|+  +|+|+|.++  . .+.  .. .+..    .. .       ...++.   +
T Consensus       303 ~i~~v~ViGa-G~mG~~iA~~~a~~~G~--~V~l~d~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~---~  376 (699)
T TIGR02440       303 KIKKVGILGG-GLMGGGIASVTATKAGI--PVRIKDINPQGINNALKYAWKLLDKGVKRRHMTPAERDNQMALITG---T  376 (699)
T ss_pred             cccEEEEECC-cHHHHHHHHHHHHHcCC--eEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHcCeEE---e
Confidence            4468999999 9999999999884 788  999999986  1 111  11 1111    10 0       122333   4


Q ss_pred             CcHHhhhCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCC-CeEEEEecCCCCCchHHHHHHHHHhCCCC
Q 018512          102 PQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCP-NATVNLISNPVNSTVPIAAEVFKKAGTYD  180 (354)
Q Consensus       102 ~d~~~al~~aDvVIi~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p-~a~viv~tNPv~~~~~~~~~~~~~~~~~p  180 (354)
                      +|+ +++++||+||.++              .+++++.+++..++.++++ ++  |++||.+.+...-++    ..... 
T Consensus       377 ~~~-~~~~~adlViEav--------------~E~l~~K~~v~~~l~~~~~~~~--ilasnTS~l~i~~la----~~~~~-  434 (699)
T TIGR02440       377 TDY-RGFKDVDIVIEAV--------------FEDLALKHQMVKDIEQECAAHT--IFASNTSSLPIGQIA----AAASR-  434 (699)
T ss_pred             CCh-HHhccCCEEEEec--------------cccHHHHHHHHHHHHhhCCCCc--EEEeCCCCCCHHHHH----HhcCC-
Confidence            576 6899999999983              5678899999999999994 66  558999886653332    22233 


Q ss_pred             CCCEEEec
Q 018512          181 PKKLLGVT  188 (354)
Q Consensus       181 ~~kviG~t  188 (354)
                      ++|++|+-
T Consensus       435 p~r~~g~H  442 (699)
T TIGR02440       435 PENVIGLH  442 (699)
T ss_pred             cccEEEEe
Confidence            46888873

Members represent alpha subunit of multifunctional enzyme complex of the fatty acid degradation cycle. Plays a minor role in aerobic beta-oxidation of fatty acids. FadJI complex is necessary for anaerobic growth on short-chain acids with nitrate as an electron acceptor. Activities include: enoyl-CoA hydratase (EC 4.2.1.17),3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35), 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3). A representative is E. coli FadJ (aka YfcX). This model excludes the FadB of TIGR02437 equivalog.

>PRK08293 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=98.39  E-value=3.1e-06  Score=80.25  Aligned_cols=119  Identities=21%  Similarity=0.331  Sum_probs=76.1

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc---hhH--HHHHh-----cCCC---------CCeEEEEeCCCc
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT---PGV--TADIS-----HMDT---------GAVVRGFLGQPQ  103 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~---~g~--~~dl~-----~~~~---------~~~v~~~~~~~d  103 (354)
                      +||+|||+ |.+|..+|..++..|+  +|+++|+++.   +..  ...+.     ....         ...++.   ++|
T Consensus         4 ~kIaViGa-G~mG~~iA~~la~~G~--~V~l~d~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~---~~d   77 (287)
T PRK08293          4 KNVTVAGA-GVLGSQIAFQTAFHGF--DVTIYDISDEALEKAKERIAKLADRYVRDLEATKEAPAEAALNRITL---TTD   77 (287)
T ss_pred             cEEEEECC-CHHHHHHHHHHHhcCC--eEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhHHHHHcCeEE---eCC
Confidence            58999999 9999999999998888  9999999861   111  00110     0000         012332   457


Q ss_pred             HHhhhCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCC-CeEEEEecCCCCCchHHHHHHHHHhCCCCCC
Q 018512          104 LENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCP-NATVNLISNPVNSTVPIAAEVFKKAGTYDPK  182 (354)
Q Consensus       104 ~~~al~~aDvVIi~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p-~a~viv~tNPv~~~~~~~~~~~~~~~~~p~~  182 (354)
                      +++++++||+||++.              ..+.+..+++.+.+.++++ ++  ++++|.......   +. ...... +.
T Consensus        78 ~~~a~~~aDlVieav--------------pe~~~~k~~~~~~l~~~~~~~~--ii~sntSt~~~~---~~-~~~~~~-~~  136 (287)
T PRK08293         78 LAEAVKDADLVIEAV--------------PEDPEIKGDFYEELAKVAPEKT--IFATNSSTLLPS---QF-AEATGR-PE  136 (287)
T ss_pred             HHHHhcCCCEEEEec--------------cCCHHHHHHHHHHHHhhCCCCC--EEEECcccCCHH---HH-HhhcCC-cc
Confidence            778899999999984              2345677777888888775 55  335676654432   21 222232 35


Q ss_pred             CEEEec
Q 018512          183 KLLGVT  188 (354)
Q Consensus       183 kviG~t  188 (354)
                      |++|+.
T Consensus       137 r~vg~H  142 (287)
T PRK08293        137 KFLALH  142 (287)
T ss_pred             cEEEEc
Confidence            777763

>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]

Probab=98.33  E-value=9.9e-06  Score=77.35  Aligned_cols=106  Identities=18%  Similarity=0.133  Sum_probs=76.1

Q ss_pred             CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chh--HHHHHhcCCCCCeEEEE----eCCCcHHhhhCCCc
Q 018512           41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPG--VTADISHMDTGAVVRGF----LGQPQLENALTGMD  112 (354)
Q Consensus        41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g--~~~dl~~~~~~~~v~~~----~~~~d~~~al~~aD  112 (354)
                      ..++|+|+||+|++|+.++..|+++|+  +|+--=+++  .+.  +..+|....  .++..+    ...+.+.+|++|||
T Consensus         5 ~~~~VcVTGAsGfIgswivk~LL~rGY--~V~gtVR~~~~~k~~~~L~~l~~a~--~~l~l~~aDL~d~~sf~~ai~gcd   80 (327)
T KOG1502|consen    5 EGKKVCVTGASGFIGSWIVKLLLSRGY--TVRGTVRDPEDEKKTEHLRKLEGAK--ERLKLFKADLLDEGSFDKAIDGCD   80 (327)
T ss_pred             CCcEEEEeCCchHHHHHHHHHHHhCCC--EEEEEEcCcchhhhHHHHHhcccCc--ccceEEeccccccchHHHHHhCCC
Confidence            457999999999999999999999999  666655554  222  344555332  112221    22345789999999


Q ss_pred             EEEEcCCCCCCCCC-CHHHHHHHHHHHHHHHHHHHhhhC
Q 018512          113 LVIIPAGVPRKPGM-TRDDLFNINAGIVRTLCEGIAKCC  150 (354)
Q Consensus       113 vVIi~ag~~~~~g~-~r~d~~~~n~~~~~~i~~~i~~~~  150 (354)
                      .|+++|....-... .-.+++.-.++...++.+.+.+..
T Consensus        81 gVfH~Asp~~~~~~~~e~~li~pav~Gt~nVL~ac~~~~  119 (327)
T KOG1502|consen   81 GVFHTASPVDFDLEDPEKELIDPAVKGTKNVLEACKKTK  119 (327)
T ss_pred             EEEEeCccCCCCCCCcHHhhhhHHHHHHHHHHHHHhccC
Confidence            99999875432222 234678889999999999999987

>PLN00198 anthocyanidin reductase; Provisional

Probab=98.32  E-value=1.5e-05  Score=76.81  Aligned_cols=177  Identities=15%  Similarity=0.073  Sum_probs=101.7

Q ss_pred             CCCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC-chhHHHHHhcCCCCCeEEEE----eCCCcHHhhhCCCcE
Q 018512           39 GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN-TPGVTADISHMDTGAVVRGF----LGQPQLENALTGMDL  113 (354)
Q Consensus        39 ~~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~-~~g~~~dl~~~~~~~~v~~~----~~~~d~~~al~~aDv  113 (354)
                      +..+++|.|+||+|++|++++..|+..|.  +|++++++. ......++......+.+..+    ....++.++++++|+
T Consensus         6 ~~~~~~vlItG~~GfIG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~   83 (338)
T PLN00198          6 PTGKKTACVIGGTGFLASLLIKLLLQKGY--AVNTTVRDPENQKKIAHLRALQELGDLKIFGADLTDEESFEAPIAGCDL   83 (338)
T ss_pred             CCCCCeEEEECCchHHHHHHHHHHHHCCC--EEEEEECCCCCHHHHHHHHhcCCCCceEEEEcCCCChHHHHHHHhcCCE
Confidence            34567999999999999999999999887  887776654 22211112111111122222    112235677889999


Q ss_pred             EEEcCCCCCCCCCC-HHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecCCCCCc------hHHHHHH------HHHhCCC
Q 018512          114 VIIPAGVPRKPGMT-RDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNST------VPIAAEV------FKKAGTY  179 (354)
Q Consensus       114 VIi~ag~~~~~g~~-r~d~~~~n~~~~~~i~~~i~~~~-p~a~viv~tNPv~~~------~~~~~~~------~~~~~~~  179 (354)
                      ||++|+........ ..+++..|+....++++.+.+.. .+.+|.+.|--+...      .....|-      .... ..
T Consensus        84 vih~A~~~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~~~~~~v~~SS~~~~g~~~~~~~~~~~~E~~~~~~~~~~~-~~  162 (338)
T PLN00198         84 VFHVATPVNFASEDPENDMIKPAIQGVHNVLKACAKAKSVKRVILTSSAAAVSINKLSGTGLVMNEKNWTDVEFLTS-EK  162 (338)
T ss_pred             EEEeCCCCccCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeecceeeeccCCCCCCceeccccCCchhhhhh-cC
Confidence            99999753222122 23456889999999999998764 344444333211100      0000000      0000 12


Q ss_pred             CCCCEEEeccchHHHHHHHHHHHhCCCCCCCc-ceEEeec
Q 018512          180 DPKKLLGVTMLDVVRANTFVAEVLGLDPRDVD-VPVVGGH  218 (354)
Q Consensus       180 p~~kviG~t~ld~~r~~~~la~~l~v~~~~v~-~~v~G~h  218 (354)
                      ++...+|.+.+...++...+++..|++...++ ..++|..
T Consensus       163 ~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~R~~~vyGp~  202 (338)
T PLN00198        163 PPTWGYPASKTLAEKAAWKFAEENNIDLITVIPTLMAGPS  202 (338)
T ss_pred             CccchhHHHHHHHHHHHHHHHHhcCceEEEEeCCceECCC
Confidence            33445666665566666677777787665554 5677865

>PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate

Probab=98.30  E-value=2.5e-06  Score=73.63  Aligned_cols=94  Identities=23%  Similarity=0.324  Sum_probs=62.8

Q ss_pred             eEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCC--C------CCeEEEEeCCCcHHhhhCCCcEEE
Q 018512           44 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMD--T------GAVVRGFLGQPQLENALTGMDLVI  115 (354)
Q Consensus        44 kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~--~------~~~v~~~~~~~d~~~al~~aDvVI  115 (354)
                      ||+|+|| |+.|+++|..|..+++  +|.|+++++.......-.+..  .      ...+..   ++|+++++++||+||
T Consensus         1 KI~ViGa-G~~G~AlA~~la~~g~--~V~l~~~~~~~~~~i~~~~~n~~~~~~~~l~~~i~~---t~dl~~a~~~ad~Ii   74 (157)
T PF01210_consen    1 KIAVIGA-GNWGTALAALLADNGH--EVTLWGRDEEQIEEINETRQNPKYLPGIKLPENIKA---TTDLEEALEDADIII   74 (157)
T ss_dssp             EEEEESS-SHHHHHHHHHHHHCTE--EEEEETSCHHHHHHHHHHTSETTTSTTSBEETTEEE---ESSHHHHHTT-SEEE
T ss_pred             CEEEECc-CHHHHHHHHHHHHcCC--EEEEEeccHHHHHHHHHhCCCCCCCCCcccCccccc---ccCHHHHhCcccEEE
Confidence            8999999 9999999999999997  999999976211112122221  1      112333   468899999999999


Q ss_pred             EcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCC-CeEEEEec
Q 018512          116 IPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCP-NATVNLIS  159 (354)
Q Consensus       116 i~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p-~a~viv~t  159 (354)
                      ++.  |              ....+++++++..+-+ +..++.++
T Consensus        75 iav--P--------------s~~~~~~~~~l~~~l~~~~~ii~~~  103 (157)
T PF01210_consen   75 IAV--P--------------SQAHREVLEQLAPYLKKGQIIISAT  103 (157)
T ss_dssp             E-S-----------------GGGHHHHHHHHTTTSHTT-EEEETS
T ss_pred             ecc--c--------------HHHHHHHHHHHhhccCCCCEEEEec
Confidence            973  2              1246678888888774 44555443

This family represents the N-terminal NAD-binding domain [].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0046168 glycerol-3-phosphate catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 1YJ8_B 2PLA_A 1WPQ_B 1X0V_A 1X0X_A 1BG6_A 1TXG_B 1N1G_A 1M67_A 1JDJ_A ....

>PLN02662 cinnamyl-alcohol dehydrogenase family protein

Probab=98.30  E-value=1.2e-05  Score=76.79  Aligned_cols=113  Identities=17%  Similarity=0.118  Sum_probs=73.7

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCch-hHHHHHhcCC-CCCeEEEE----eCCCcHHhhhCCCcEEE
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP-GVTADISHMD-TGAVVRGF----LGQPQLENALTGMDLVI  115 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~-g~~~dl~~~~-~~~~v~~~----~~~~d~~~al~~aDvVI  115 (354)
                      .+||.|+||+|++|++++..|+..|+  +|++++++... .....+.... ....+..+    .....+.++++++|+||
T Consensus         4 ~~~ilVtGatGfIG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi   81 (322)
T PLN02662          4 GKVVCVTGASGYIASWLVKLLLQRGY--TVKATVRDPNDPKKTEHLLALDGAKERLHLFKANLLEEGSFDSVVDGCEGVF   81 (322)
T ss_pred             CCEEEEECChHHHHHHHHHHHHHCCC--EEEEEEcCCCchhhHHHHHhccCCCCceEEEeccccCcchHHHHHcCCCEEE
Confidence            36999999999999999999999988  88888876521 1112221110 01122221    12234667889999999


Q ss_pred             EcCCCCCCC-CCCHHHHHHHHHHHHHHHHHHHhhh-CCCeEEE
Q 018512          116 IPAGVPRKP-GMTRDDLFNINAGIVRTLCEGIAKC-CPNATVN  156 (354)
Q Consensus       116 i~ag~~~~~-g~~r~d~~~~n~~~~~~i~~~i~~~-~p~a~vi  156 (354)
                      ++|+..... .....+++..|+....++++.+.+. ..+.+|.
T Consensus        82 h~A~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~v~  124 (322)
T PLN02662         82 HTASPFYHDVTDPQAELIDPAVKGTLNVLRSCAKVPSVKRVVV  124 (322)
T ss_pred             EeCCcccCCCCChHHHHHHHHHHHHHHHHHHHHhCCCCCEEEE
Confidence            998754321 1122356778999999999998876 4444333

>PLN02206 UDP-glucuronate decarboxylase

Probab=98.29  E-value=8.1e-06  Score=82.12  Aligned_cols=113  Identities=14%  Similarity=0.049  Sum_probs=75.7

Q ss_pred             CCCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEE
Q 018512           39 GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVII  116 (354)
Q Consensus        39 ~~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi  116 (354)
                      +.+.|||.|+||+|+||++++..|+.+|.  +|+.+|...  .......  +.. .+.++.+.. +-...++.++|+||+
T Consensus       116 ~~~~~kILVTGatGfIGs~Lv~~Ll~~G~--~V~~ld~~~~~~~~~~~~--~~~-~~~~~~i~~-D~~~~~l~~~D~ViH  189 (442)
T PLN02206        116 KRKGLRVVVTGGAGFVGSHLVDRLMARGD--SVIVVDNFFTGRKENVMH--HFS-NPNFELIRH-DVVEPILLEVDQIYH  189 (442)
T ss_pred             ccCCCEEEEECcccHHHHHHHHHHHHCcC--EEEEEeCCCccchhhhhh--hcc-CCceEEEEC-CccChhhcCCCEEEE
Confidence            44568999999999999999999999987  899998753  1111111  111 122333211 122356789999999


Q ss_pred             cCCCCC--CCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 018512          117 PAGVPR--KPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  159 (354)
Q Consensus       117 ~ag~~~--~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~t  159 (354)
                      +|+...  .......+++..|+....++++.+++.+.  .+|++|
T Consensus       190 lAa~~~~~~~~~~p~~~~~~Nv~gt~nLleaa~~~g~--r~V~~S  232 (442)
T PLN02206        190 LACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA--RFLLTS  232 (442)
T ss_pred             eeeecchhhhhcCHHHHHHHHHHHHHHHHHHHHHhCC--EEEEEC
Confidence            987542  11223456788999999999999988753  455444

>PLN02650 dihydroflavonol-4-reductase

Probab=98.27  E-value=1.9e-05  Score=76.54  Aligned_cols=178  Identities=15%  Similarity=0.040  Sum_probs=101.0

Q ss_pred             CCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc-hhHHHHHhcC-CCCCeEEEE----eCCCcHHhhhCCCcE
Q 018512           40 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT-PGVTADISHM-DTGAVVRGF----LGQPQLENALTGMDL  113 (354)
Q Consensus        40 ~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~-~g~~~dl~~~-~~~~~v~~~----~~~~d~~~al~~aDv  113 (354)
                      +..++|.|+||+|++|++++..|+..|.  +|++++++.. .....++... .....+..+    .....+.++++++|+
T Consensus         3 ~~~k~iLVTGatGfIGs~l~~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~d~   80 (351)
T PLN02650          3 SQKETVCVTGASGFIGSWLVMRLLERGY--TVRATVRDPANVKKVKHLLDLPGATTRLTLWKADLAVEGSFDDAIRGCTG   80 (351)
T ss_pred             CCCCEEEEeCCcHHHHHHHHHHHHHCCC--EEEEEEcCcchhHHHHHHHhccCCCCceEEEEecCCChhhHHHHHhCCCE
Confidence            3456999999999999999999999887  8888887651 1111122111 111112221    112345678899999


Q ss_pred             EEEcCCCCCCCCCC-HHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCC-CCCc----hHHHHHHHH---Hh--CCCCCC
Q 018512          114 VIIPAGVPRKPGMT-RDDLFNINAGIVRTLCEGIAKCCPNATVNLISNP-VNST----VPIAAEVFK---KA--GTYDPK  182 (354)
Q Consensus       114 VIi~ag~~~~~g~~-r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNP-v~~~----~~~~~~~~~---~~--~~~p~~  182 (354)
                      ||++|+........ ..+.+..|+....++++.+.+.+.-..||++|.. +..-    .+...+-.+   ..  ...++.
T Consensus        81 ViH~A~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~r~v~~SS~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~  160 (351)
T PLN02650         81 VFHVATPMDFESKDPENEVIKPTVNGMLSIMKACAKAKTVRRIVFTSSAGTVNVEEHQKPVYDEDCWSDLDFCRRKKMTG  160 (351)
T ss_pred             EEEeCCCCCCCCCCchhhhhhHHHHHHHHHHHHHHhcCCceEEEEecchhhcccCCCCCCccCcccCCchhhhhcccccc
Confidence            99998753211112 2356788999999999999886532344444322 1000    000000000   00  000011


Q ss_pred             CEEEeccchHHHHHHHHHHHhCCCCCCCc-ceEEeecC
Q 018512          183 KLLGVTMLDVVRANTFVAEVLGLDPRDVD-VPVVGGHA  219 (354)
Q Consensus       183 kviG~t~ld~~r~~~~la~~l~v~~~~v~-~~v~G~hg  219 (354)
                      ..+|.+.+....+...+++..|++..-++ +.++|...
T Consensus       161 ~~Y~~sK~~~E~~~~~~~~~~gi~~~ilRp~~v~Gp~~  198 (351)
T PLN02650        161 WMYFVSKTLAEKAAWKYAAENGLDFISIIPTLVVGPFI  198 (351)
T ss_pred             chHHHHHHHHHHHHHHHHHHcCCeEEEECCCceECCCC
Confidence            24666665556666667777787765554 56888653

>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]

Probab=98.27  E-value=1.4e-05  Score=75.03  Aligned_cols=165  Identities=16%  Similarity=0.122  Sum_probs=108.0

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEE-EeCCCcHHhhh--CCCcEEEEcCC
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRG-FLGQPQLENAL--TGMDLVIIPAG  119 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~-~~~~~d~~~al--~~aDvVIi~ag  119 (354)
                      |+|.|+||+|++||+.+..|++.|.  +++.+|... .|...-+.... ...+.+ +.+..-+.+.|  ...|.||+.|+
T Consensus         1 ~~iLVtGGAGYIGSHtv~~Ll~~G~--~vvV~DNL~-~g~~~~v~~~~-~~f~~gDi~D~~~L~~vf~~~~idaViHFAa   76 (329)
T COG1087           1 MKVLVTGGAGYIGSHTVRQLLKTGH--EVVVLDNLS-NGHKIALLKLQ-FKFYEGDLLDRALLTAVFEENKIDAVVHFAA   76 (329)
T ss_pred             CeEEEecCcchhHHHHHHHHHHCCC--eEEEEecCC-CCCHHHhhhcc-CceEEeccccHHHHHHHHHhcCCCEEEECcc
Confidence            6899999999999999999999998  999999865 11111111110 011111 11111122222  47899999987


Q ss_pred             CCCCCC--CCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEe-----cCCCCCchHHHHHHHHHhCCCCCCCEEEeccchH
Q 018512          120 VPRKPG--MTRDDLFNINAGIVRTLCEGIAKCCPNATVNLI-----SNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDV  192 (354)
Q Consensus       120 ~~~~~g--~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~-----tNPv~~~~~~~~~~~~~~~~~p~~kviG~t~ld~  192 (354)
                      ...-..  +.-..+...|+-....+.+.|++++.+.+|+-.     .+|..+-  +     .+..-..|.+.+|-+.|..
T Consensus        77 ~~~VgESv~~Pl~Yy~NNv~gTl~Ll~am~~~gv~~~vFSStAavYG~p~~~P--I-----~E~~~~~p~NPYG~sKlm~  149 (329)
T COG1087          77 SISVGESVQNPLKYYDNNVVGTLNLIEAMLQTGVKKFIFSSTAAVYGEPTTSP--I-----SETSPLAPINPYGRSKLMS  149 (329)
T ss_pred             ccccchhhhCHHHHHhhchHhHHHHHHHHHHhCCCEEEEecchhhcCCCCCcc--c-----CCCCCCCCCCcchhHHHHH
Confidence            643211  235678899999999999999999988766543     3454421  1     1222344678899998888


Q ss_pred             HHHHHHHHHHhCCCCCCC-cceEEeec
Q 018512          193 VRANTFVAEVLGLDPRDV-DVPVVGGH  218 (354)
Q Consensus       193 ~r~~~~la~~l~v~~~~v-~~~v~G~h  218 (354)
                      .++-..+++..+....-+ +.-+.|-|
T Consensus       150 E~iL~d~~~a~~~~~v~LRYFN~aGA~  176 (329)
T COG1087         150 EEILRDAAKANPFKVVILRYFNVAGAC  176 (329)
T ss_pred             HHHHHHHHHhCCCcEEEEEecccccCC
Confidence            888888888887654443 34456644

>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase

Probab=98.27  E-value=2.2e-05  Score=76.21  Aligned_cols=174  Identities=14%  Similarity=0.057  Sum_probs=96.3

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCch--hHHHHHhcCCCCCeEEE-EeCCCcHHhhhCC--CcEEEE
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP--GVTADISHMDTGAVVRG-FLGQPQLENALTG--MDLVII  116 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~--g~~~dl~~~~~~~~v~~-~~~~~d~~~al~~--aDvVIi  116 (354)
                      .++|.|+||+|++|++++..|+..|.  +|+.+|++...  .....+........+.. .....++.+.+++  .|+||+
T Consensus         4 ~k~ilItGatG~IG~~l~~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vih   81 (349)
T TIGR02622         4 GKKVLVTGHTGFKGSWLSLWLLELGA--EVYGYSLDPPTSPNLFELLNLAKKIEDHFGDIRDAAKLRKAIAEFKPEIVFH   81 (349)
T ss_pred             CCEEEEECCCChhHHHHHHHHHHCCC--EEEEEeCCCccchhHHHHHhhcCCceEEEccCCCHHHHHHHHhhcCCCEEEE
Confidence            46899999999999999999999887  89999987621  11111211110001111 1111234455554  599999


Q ss_pred             cCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCC-CCCchHHHHHHHHHhCCCCCCCEEEeccchHH
Q 018512          117 PAGVPRKP--GMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNP-VNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVV  193 (354)
Q Consensus       117 ~ag~~~~~--g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNP-v~~~~~~~~~~~~~~~~~p~~kviG~t~ld~~  193 (354)
                      +|+.+...  .......+..|+....++++.+++.+....++++|.. +...... ...+.....+++...+|.+.....
T Consensus        82 ~A~~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~iv~~SS~~vyg~~~~-~~~~~e~~~~~p~~~Y~~sK~~~e  160 (349)
T TIGR02622        82 LAAQPLVRKSYADPLETFETNVMGTVNLLEAIRAIGSVKAVVNVTSDKCYRNDEW-VWGYRETDPLGGHDPYSSSKACAE  160 (349)
T ss_pred             CCcccccccchhCHHHHHHHhHHHHHHHHHHHHhcCCCCEEEEEechhhhCCCCC-CCCCccCCCCCCCCcchhHHHHHH
Confidence            99854221  1223456788999999999999876533345555431 1110000 000011112334456777665555


Q ss_pred             HHHHHHHHHh-------CCCCCCCc-ceEEeec
Q 018512          194 RANTFVAEVL-------GLDPRDVD-VPVVGGH  218 (354)
Q Consensus       194 r~~~~la~~l-------~v~~~~v~-~~v~G~h  218 (354)
                      ++...+++.+       +++...++ +.++|..
T Consensus       161 ~~~~~~~~~~~~~~~~~~i~~~~lR~~~vyGp~  193 (349)
T TIGR02622       161 LVIASYRSSFFGVANFHGIKIASARAGNVIGGG  193 (349)
T ss_pred             HHHHHHHHHhhcccccCCCcEEEEccCcccCCC
Confidence            6656666654       44443443 4566653

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.

>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated

Probab=98.24  E-value=1.4e-05  Score=84.27  Aligned_cols=171  Identities=13%  Similarity=0.039  Sum_probs=101.6

Q ss_pred             CCCCeEEEEcCCCchHHHHHHHHHhC-CCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeC----CCc-HHhhhCCCcE
Q 018512           40 AAGFKVAILGAAGGIGQPLAMLMKIN-PLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLG----QPQ-LENALTGMDL  113 (354)
Q Consensus        40 ~~~~kI~IiGa~G~vG~~~a~~l~~~-~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~----~~d-~~~al~~aDv  113 (354)
                      .+.|||+|+||+|++|++++..|+.. ++  +|+.+|+.... . .++..   ...++.+.+    ..+ +.++++++|+
T Consensus       313 ~~~~~VLVTGatGFIGs~Lv~~Ll~~~g~--~V~~l~r~~~~-~-~~~~~---~~~~~~~~gDl~d~~~~l~~~l~~~D~  385 (660)
T PRK08125        313 KRRTRVLILGVNGFIGNHLTERLLRDDNY--EVYGLDIGSDA-I-SRFLG---HPRFHFVEGDISIHSEWIEYHIKKCDV  385 (660)
T ss_pred             hcCCEEEEECCCchHHHHHHHHHHhCCCc--EEEEEeCCchh-h-hhhcC---CCceEEEeccccCcHHHHHHHhcCCCE
Confidence            35689999999999999999999875 57  99999986521 1 11111   111222111    111 3467899999


Q ss_pred             EEEcCCCCCC--CCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCCch--HHHHHHHHHhCCCC---CCCEEE
Q 018512          114 VIIPAGVPRK--PGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTV--PIAAEVFKKAGTYD---PKKLLG  186 (354)
Q Consensus       114 VIi~ag~~~~--~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv~~~~--~~~~~~~~~~~~~p---~~kviG  186 (354)
                      ||++|+....  ......+++..|+....++.+.++++. ..+|+..|.-+.-..  ....|-.......|   +...+|
T Consensus       386 ViHlAa~~~~~~~~~~~~~~~~~Nv~~t~~ll~a~~~~~-~~~V~~SS~~vyg~~~~~~~~E~~~~~~~~p~~~p~s~Yg  464 (660)
T PRK08125        386 VLPLVAIATPIEYTRNPLRVFELDFEENLKIIRYCVKYN-KRIIFPSTSEVYGMCTDKYFDEDTSNLIVGPINKQRWIYS  464 (660)
T ss_pred             EEECccccCchhhccCHHHHHHhhHHHHHHHHHHHHhcC-CeEEEEcchhhcCCCCCCCcCccccccccCCCCCCccchH
Confidence            9999875432  222345677889999999999999876 334434443221100  00000000000001   223677


Q ss_pred             eccchHHHHHHHHHHHhCCCCCCCc-ceEEeec
Q 018512          187 VTMLDVVRANTFVAEVLGLDPRDVD-VPVVGGH  218 (354)
Q Consensus       187 ~t~ld~~r~~~~la~~l~v~~~~v~-~~v~G~h  218 (354)
                      .+.+...++-..+++..|++...++ ..++|..
T Consensus       465 ~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~  497 (660)
T PRK08125        465 VSKQLLDRVIWAYGEKEGLRFTLFRPFNWMGPR  497 (660)
T ss_pred             HHHHHHHHHHHHHHHhcCCceEEEEEceeeCCC
Confidence            7766666776777778788766665 4578864

>PLN02695 GDP-D-mannose-3',5'-epimerase

Probab=98.24  E-value=1e-05  Score=79.46  Aligned_cols=175  Identities=14%  Similarity=0.051  Sum_probs=100.1

Q ss_pred             CCCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEE--EeCCCcHHhhhCCCcEEEE
Q 018512           39 GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRG--FLGQPQLENALTGMDLVII  116 (354)
Q Consensus        39 ~~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~--~~~~~d~~~al~~aDvVIi  116 (354)
                      .+..|||+|+||+|++|++++..|...|+  +|+.+|+.... .   +........+..  +....++..+++++|+||+
T Consensus        18 ~~~~~~IlVtGgtGfIG~~l~~~L~~~G~--~V~~v~r~~~~-~---~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~Vih   91 (370)
T PLN02695         18 PSEKLRICITGAGGFIASHIARRLKAEGH--YIIASDWKKNE-H---MSEDMFCHEFHLVDLRVMENCLKVTKGVDHVFN   91 (370)
T ss_pred             CCCCCEEEEECCccHHHHHHHHHHHhCCC--EEEEEEecccc-c---cccccccceEEECCCCCHHHHHHHHhCCCEEEE
Confidence            34568999999999999999999999888  99999975311 0   000000011110  1111223456789999999


Q ss_pred             cCCCCCCCC---CCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCCchHHHHH--HHHH-h-CCCCCCCEEEecc
Q 018512          117 PAGVPRKPG---MTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAE--VFKK-A-GTYDPKKLLGVTM  189 (354)
Q Consensus       117 ~ag~~~~~g---~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~~--~~~~-~-~~~p~~kviG~t~  189 (354)
                      +|+.....+   .........|+....++++.+++...+.+|...|.-+.--......  -+.. . ..+.+...+|.+.
T Consensus        92 ~Aa~~~~~~~~~~~~~~~~~~N~~~t~nll~aa~~~~vk~~V~~SS~~vYg~~~~~~~~~~~~E~~~~p~~p~s~Yg~sK  171 (370)
T PLN02695         92 LAADMGGMGFIQSNHSVIMYNNTMISFNMLEAARINGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEK  171 (370)
T ss_pred             cccccCCccccccCchhhHHHHHHHHHHHHHHHHHhCCCEEEEeCchhhcCCccccCcCCCcCcccCCCCCCCCHHHHHH
Confidence            987432111   1123345789999999999998877665554433211110000000  0000 0 0123444666665


Q ss_pred             chHHHHHHHHHHHhCCCCCCCc-ceEEeecC
Q 018512          190 LDVVRANTFVAEVLGLDPRDVD-VPVVGGHA  219 (354)
Q Consensus       190 ld~~r~~~~la~~l~v~~~~v~-~~v~G~hg  219 (354)
                      ....++...+++..|++..-++ ..++|.++
T Consensus       172 ~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~  202 (370)
T PLN02695        172 LATEELCKHYTKDFGIECRIGRFHNIYGPFG  202 (370)
T ss_pred             HHHHHHHHHHHHHhCCCEEEEEECCccCCCC
Confidence            5566665556777787655554 56778654

>TIGR02279 PaaC-3OHAcCoADH 3-hydroxyacyl-CoA dehydrogenase PaaC

Probab=98.22  E-value=5.7e-06  Score=84.42  Aligned_cols=122  Identities=22%  Similarity=0.302  Sum_probs=78.7

Q ss_pred             CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--c-hhH--H-H---HHhcCCC---------CCeEEEEeCCC
Q 018512           41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--T-PGV--T-A---DISHMDT---------GAVVRGFLGQP  102 (354)
Q Consensus        41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~-~g~--~-~---dl~~~~~---------~~~v~~~~~~~  102 (354)
                      +..||+|||+ |.+|+.+|..++..|+  +|+++|+++  . .+.  . .   .+.....         ...++.   ++
T Consensus         4 ~~~kV~VIGa-G~MG~gIA~~la~aG~--~V~l~d~~~e~l~~~~~~i~~~l~~~~~~G~~~~~~~~~~~~~i~~---~~   77 (503)
T TIGR02279         4 NVVTVAVIGA-GAMGAGIAQVAASAGH--QVLLYDIRAEALARAIAGIEARLNSLVTKGKLTAEECERTLKRLIP---VT   77 (503)
T ss_pred             CccEEEEECc-CHHHHHHHHHHHhCCC--eEEEEeCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHhccEE---eC
Confidence            3458999999 9999999999999998  999999986  1 111  0 1   1111110         012332   35


Q ss_pred             cHHhhhCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCCchHHHHHHHHHhCCCCCC
Q 018512          103 QLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPK  182 (354)
Q Consensus       103 d~~~al~~aDvVIi~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~~~~~~~~~~p~~  182 (354)
                      ++ +++++||+||.+.              .++..+.+.+...+.++++... |++||.+.+-..-+++.    ... +.
T Consensus        78 ~~-~~l~~aDlVIEav--------------~E~~~vK~~vf~~l~~~~~~~~-IlasnTStl~i~~iA~~----~~~-p~  136 (503)
T TIGR02279        78 DL-HALADAGLVIEAI--------------VENLEVKKALFAQLEELCPADT-IIASNTSSLSITAIAAG----LAR-PE  136 (503)
T ss_pred             CH-HHhCCCCEEEEcC--------------cCcHHHHHHHHHHHHhhCCCCe-EEEECCCCCCHHHHHHh----cCc-cc
Confidence            66 5689999999983              4456677788888888885432 45788877665322222    222 34


Q ss_pred             CEEEecc
Q 018512          183 KLLGVTM  189 (354)
Q Consensus       183 kviG~t~  189 (354)
                      |++|+-+
T Consensus       137 r~~G~HF  143 (503)
T TIGR02279       137 RVAGLHF  143 (503)
T ss_pred             ceEEEec
Confidence            6767643

This 3-hydroxyacyl-CoA dehydrogenase is involved in the degradation of phenylacetic acid, presumably in steps following the opening of the phenyl ring. The sequences included in this model are all found in aparrent operons with other related genes such as paaA, paaB, paaD, paaE, paaF and paaN. Some genomes contain these other genes without an apparent paaC in the same operon - possibly in these cases a different dehydrogenase involved in fatty acid degradation may fill in the needed activity. This enzyme has domains which are members of the pfam02737 and pfam00725 families.

>PLN02353 probable UDP-glucose 6-dehydrogenase

Probab=98.22  E-value=1e-05  Score=81.85  Aligned_cols=120  Identities=15%  Similarity=0.177  Sum_probs=76.3

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCC---------------CCCeEEEEeCCCcHHh
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMD---------------TGAVVRGFLGQPQLEN  106 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~---------------~~~~v~~~~~~~d~~~  106 (354)
                      +|||+|||+ |+||..+|..|+..|...+|+.+|+++.+  +..+....               ....+..   ++++++
T Consensus         1 ~m~I~ViG~-GyvGl~~A~~lA~~g~g~~V~gvD~~~~~--v~~l~~g~~~~~e~gl~ell~~~~~~~l~~---t~~~~~   74 (473)
T PLN02353          1 MVKICCIGA-GYVGGPTMAVIALKCPDIEVVVVDISVPR--IDAWNSDQLPIYEPGLDEVVKQCRGKNLFF---STDVEK   74 (473)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhcCCCCeEEEEECCHHH--HHHHHcCCCccCCCCHHHHHHHhhcCCEEE---EcCHHH
Confidence            489999999 99999999999998754489999998621  11111110               0111332   457778


Q ss_pred             hhCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEe--cCCCCCchHH
Q 018512          107 ALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLI--SNPVNSTVPI  168 (354)
Q Consensus       107 al~~aDvVIi~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~--tNPv~~~~~~  168 (354)
                      ++++||++|++.+.|...+-...+ -.-++..+.+.++.|.++.+++.+++.  |.|.+..-.+
T Consensus        75 ~i~~advi~I~V~TP~~~~g~~~~-~~~Dls~v~~a~~~i~~~l~~~~lVv~~STvp~Gtt~~~  137 (473)
T PLN02353         75 HVAEADIVFVSVNTPTKTRGLGAG-KAADLTYWESAARMIADVSKSDKIVVEKSTVPVKTAEAI  137 (473)
T ss_pred             HHhcCCEEEEEeCCCCCCCCCcCC-CCCcHHHHHHHHHHHHhhCCCCcEEEEeCCCCCChHHHH
Confidence            899999999999988643110000 012344566777777776654433332  6888776544

>PRK06035 3-hydroxyacyl-CoA dehydrogenase; Validated

Probab=98.22  E-value=8.9e-06  Score=77.24  Aligned_cols=118  Identities=14%  Similarity=0.217  Sum_probs=74.1

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc-hhHH-HH-------Hh---cCCC---------CCeEEEEeCC
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT-PGVT-AD-------IS---HMDT---------GAVVRGFLGQ  101 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~-~g~~-~d-------l~---~~~~---------~~~v~~~~~~  101 (354)
                      .||+|||+ |.+|..++..++..|+  +|+++|+++. .... ..       +.   +...         ...+..   +
T Consensus         4 ~~I~ViGa-G~mG~~iA~~la~~G~--~V~l~d~~~~~l~~~~~~i~~~~~~l~~~~~~g~~~~~~~~~~~~~i~~---~   77 (291)
T PRK06035          4 KVIGVVGS-GVMGQGIAQVFARTGY--DVTIVDVSEEILKNAMELIESGPYGLRNLVEKGKMSEDEAKAIMARIRT---S   77 (291)
T ss_pred             cEEEEECc-cHHHHHHHHHHHhcCC--eEEEEeCCHHHHHHHHHHHHhhhhhHHHHHHcCCCCHHHHHHHHhCcEe---e
Confidence            48999999 9999999999999998  9999999861 1111 00       11   1010         011222   3


Q ss_pred             CcHHhhhCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCC-CeEEEEecCCCCCchHHHHHHHHHhCCCC
Q 018512          102 PQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCP-NATVNLISNPVNSTVPIAAEVFKKAGTYD  180 (354)
Q Consensus       102 ~d~~~al~~aDvVIi~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p-~a~viv~tNPv~~~~~~~~~~~~~~~~~p  180 (354)
                      +++ +++++||+||.+.              ..+.+..+++.+.+.++++ ++++  +||...+...-+    ..... .
T Consensus        78 ~~~-~~~~~aDlVieav--------------~e~~~~k~~~~~~l~~~~~~~~il--~S~tsg~~~~~l----a~~~~-~  135 (291)
T PRK06035         78 TSY-ESLSDADFIVEAV--------------PEKLDLKRKVFAELERNVSPETII--ASNTSGIMIAEI----ATALE-R  135 (291)
T ss_pred             CCH-HHhCCCCEEEEcC--------------cCcHHHHHHHHHHHHhhCCCCeEE--EEcCCCCCHHHH----HhhcC-C
Confidence            455 6789999999984              2234566777777888775 5643  576666543222    22222 2


Q ss_pred             CCCEEEec
Q 018512          181 PKKLLGVT  188 (354)
Q Consensus       181 ~~kviG~t  188 (354)
                      +.|++|+-
T Consensus       136 ~~r~ig~h  143 (291)
T PRK06035        136 KDRFIGMH  143 (291)
T ss_pred             cccEEEEe
Confidence            46788874

>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase

Probab=98.20  E-value=2.3e-05  Score=74.11  Aligned_cols=167  Identities=15%  Similarity=0.053  Sum_probs=96.8

Q ss_pred             eEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc---hhHHHHHhcCCCCCeEEEE----eCCCcHHhhhCC--CcEE
Q 018512           44 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT---PGVTADISHMDTGAVVRGF----LGQPQLENALTG--MDLV  114 (354)
Q Consensus        44 kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~---~g~~~dl~~~~~~~~v~~~----~~~~d~~~al~~--aDvV  114 (354)
                      ||.|+||+|++|++++..|+..+...+|+++|....   .....++...   +.+..+    ....++.+++++  +|+|
T Consensus         1 ~ilItGatG~iG~~l~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~Dl~~~~~~~~~~~~~~~d~v   77 (317)
T TIGR01181         1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVLDKLTYAGNLENLADLEDN---PRYRFVKGDIGDRELVSRLFTEHQPDAV   77 (317)
T ss_pred             CEEEEcCCchHHHHHHHHHHHhCCCCEEEEecCCCcchhhhhhhhhccC---CCcEEEEcCCcCHHHHHHHHhhcCCCEE
Confidence            589999999999999999988763338888886431   1111222211   112221    112345566777  8999


Q ss_pred             EEcCCCCCC--CCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCC-CCC----chHHHHHHHHHhCCCCCCCEEEe
Q 018512          115 IIPAGVPRK--PGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNP-VNS----TVPIAAEVFKKAGTYDPKKLLGV  187 (354)
Q Consensus       115 Ii~ag~~~~--~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNP-v~~----~~~~~~~~~~~~~~~p~~kviG~  187 (354)
                      |++|+....  .......++..|+.....+++.+.+...+..++.+|.. +..    ....     .......+...+|.
T Consensus        78 i~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~v~g~~~~~~~~-----~e~~~~~~~~~Y~~  152 (317)
T TIGR01181        78 VHFAAESHVDRSISGPAAFIETNVVGTYTLLEAVRKYWHEFRFHHISTDEVYGDLEKGDAF-----TETTPLAPSSPYSA  152 (317)
T ss_pred             EEcccccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCceEEEeeccceeCCCCCCCCc-----CCCCCCCCCCchHH
Confidence            999875421  11233456788999999999999887655455555421 100    0000     01112233445666


Q ss_pred             ccchHHHHHHHHHHHhCCCCCCCc-ceEEeec
Q 018512          188 TMLDVVRANTFVAEVLGLDPRDVD-VPVVGGH  218 (354)
Q Consensus       188 t~ld~~r~~~~la~~l~v~~~~v~-~~v~G~h  218 (354)
                      +.....++...+++..+++..-++ ..++|..
T Consensus       153 sK~~~e~~~~~~~~~~~~~~~i~R~~~i~G~~  184 (317)
T TIGR01181       153 SKAASDHLVRAYHRTYGLPALITRCSNNYGPY  184 (317)
T ss_pred             HHHHHHHHHHHHHHHhCCCeEEEEeccccCCC
Confidence            655555665666777777654443 4566643

This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.

>CHL00194 ycf39 Ycf39; Provisional

Probab=98.19  E-value=1.1e-05  Score=77.34  Aligned_cols=108  Identities=11%  Similarity=0.065  Sum_probs=71.9

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEE-EeCCCcHHhhhCCCcEEEEcCCCC
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRG-FLGQPQLENALTGMDLVIIPAGVP  121 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~-~~~~~d~~~al~~aDvVIi~ag~~  121 (354)
                      |||+|+||+|++|++++..|+..|+  +|+.++++....  ..+.+... ..+.. .....++.++++++|+||++++..
T Consensus         1 MkIlVtGatG~iG~~lv~~Ll~~g~--~V~~l~R~~~~~--~~l~~~~v-~~v~~Dl~d~~~l~~al~g~d~Vi~~~~~~   75 (317)
T CHL00194          1 MSLLVIGATGTLGRQIVRQALDEGY--QVRCLVRNLRKA--SFLKEWGA-ELVYGDLSLPETLPPSFKGVTAIIDASTSR   75 (317)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCC--eEEEEEcChHHh--hhHhhcCC-EEEECCCCCHHHHHHHHCCCCEEEECCCCC
Confidence            6999999999999999999999987  899998865211  11121111 11111 112234678899999999986533


Q ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEe
Q 018512          122 RKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLI  158 (354)
Q Consensus       122 ~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~  158 (354)
                      ..   ...++...|.....++++.+++.+.+-+|.+.
T Consensus        76 ~~---~~~~~~~~~~~~~~~l~~aa~~~gvkr~I~~S  109 (317)
T CHL00194         76 PS---DLYNAKQIDWDGKLALIEAAKAAKIKRFIFFS  109 (317)
T ss_pred             CC---CccchhhhhHHHHHHHHHHHHHcCCCEEEEec
Confidence            21   12234567888889999999988766444433

>PRK05808 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=98.19  E-value=1.5e-05  Score=75.36  Aligned_cols=118  Identities=19%  Similarity=0.329  Sum_probs=77.3

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc---hhH--H----HHHhcCC-C--------CCeEEEEeCCCcH
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT---PGV--T----ADISHMD-T--------GAVVRGFLGQPQL  104 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~---~g~--~----~dl~~~~-~--------~~~v~~~~~~~d~  104 (354)
                      .||+|||+ |.+|..++..++..|+  +|+++|+++.   .+.  .    .++.+.. .        ...++.   ++++
T Consensus         4 ~kI~VIG~-G~mG~~ia~~la~~g~--~V~~~d~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~l~~---~~~~   77 (282)
T PRK05808          4 QKIGVIGA-GTMGNGIAQVCAVAGY--DVVMVDISDAAVDRGLATITKSLDRLVKKGKMTEADKEAALARITG---TTDL   77 (282)
T ss_pred             cEEEEEcc-CHHHHHHHHHHHHCCC--ceEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhCeEE---eCCH
Confidence            48999999 9999999999999988  8999999861   111  0    1111111 0        012332   3465


Q ss_pred             HhhhCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCC-CeEEEEecCCCCCchHHHHHHHHHhCCCCCCC
Q 018512          105 ENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCP-NATVNLISNPVNSTVPIAAEVFKKAGTYDPKK  183 (354)
Q Consensus       105 ~~al~~aDvVIi~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p-~a~viv~tNPv~~~~~~~~~~~~~~~~~p~~k  183 (354)
                       +++++||+||+++              ..+....+++.+.+.++++ ++++  .||-.++-...+    ....+.| .|
T Consensus        78 -~~~~~aDlVi~av--------------~e~~~~k~~~~~~l~~~~~~~~il--~s~ts~~~~~~l----a~~~~~~-~r  135 (282)
T PRK05808         78 -DDLKDADLVIEAA--------------TENMDLKKKIFAQLDEIAKPEAIL--ATNTSSLSITEL----AAATKRP-DK  135 (282)
T ss_pred             -HHhccCCeeeecc--------------cccHHHHHHHHHHHHhhCCCCcEE--EECCCCCCHHHH----HHhhCCC-cc
Confidence             5689999999984              3445667788888888875 6643  677777554332    2333333 57


Q ss_pred             EEEec
Q 018512          184 LLGVT  188 (354)
Q Consensus       184 viG~t  188 (354)
                      ++|+-
T Consensus       136 ~ig~h  140 (282)
T PRK05808        136 VIGMH  140 (282)
T ss_pred             eEEee
Confidence            88874

>PLN02214 cinnamoyl-CoA reductase

Probab=98.18  E-value=3.5e-05  Score=74.77  Aligned_cols=170  Identities=15%  Similarity=0.027  Sum_probs=98.3

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCch---hHHHHHhcCCCCCeEEEE----eCCCcHHhhhCCCcEE
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP---GVTADISHMDTGAVVRGF----LGQPQLENALTGMDLV  114 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~---g~~~dl~~~~~~~~v~~~----~~~~d~~~al~~aDvV  114 (354)
                      .++|.|+||+|++|++++..|+..|.  +|+.++++...   .....+...  ...+..+    ....++.++++++|+|
T Consensus        10 ~~~vlVTGatGfIG~~l~~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~d~~~~~~~~~~~d~V   85 (342)
T PLN02214         10 GKTVCVTGAGGYIASWIVKILLERGY--TVKGTVRNPDDPKNTHLRELEGG--KERLILCKADLQDYEALKAAIDGCDGV   85 (342)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcC--EEEEEeCCchhhhHHHHHHhhCC--CCcEEEEecCcCChHHHHHHHhcCCEE
Confidence            46899999999999999999999987  88888876421   111122211  1112221    1223456788999999


Q ss_pred             EEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCC-CCCch-----HHHHHHHHHhCCCC--CCCEEE
Q 018512          115 IIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNP-VNSTV-----PIAAEVFKKAGTYD--PKKLLG  186 (354)
Q Consensus       115 Ii~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNP-v~~~~-----~~~~~~~~~~~~~p--~~kviG  186 (354)
                      |++|+...   ....+.+..|+....++++.+++.+.+.+|++.|-. +....     ....|-.+.....+  +...+|
T Consensus        86 ih~A~~~~---~~~~~~~~~nv~gt~~ll~aa~~~~v~r~V~~SS~~avyg~~~~~~~~~~~E~~~~~~~~~~~p~~~Y~  162 (342)
T PLN02214         86 FHTASPVT---DDPEQMVEPAVNGAKFVINAAAEAKVKRVVITSSIGAVYMDPNRDPEAVVDESCWSDLDFCKNTKNWYC  162 (342)
T ss_pred             EEecCCCC---CCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeccceeeeccCCCCCCcccCcccCCChhhccccccHHH
Confidence            99998542   234566788999999999999987655444433321 11000     00001000000000  112344


Q ss_pred             eccchHHHHHHHHHHHhCCCCCCCc-ceEEeec
Q 018512          187 VTMLDVVRANTFVAEVLGLDPRDVD-VPVVGGH  218 (354)
Q Consensus       187 ~t~ld~~r~~~~la~~l~v~~~~v~-~~v~G~h  218 (354)
                      .+.....++...+++..|++..-++ ..|+|..
T Consensus       163 ~sK~~aE~~~~~~~~~~g~~~v~lRp~~vyGp~  195 (342)
T PLN02214        163 YGKMVAEQAAWETAKEKGVDLVVLNPVLVLGPP  195 (342)
T ss_pred             HHHHHHHHHHHHHHHHcCCcEEEEeCCceECCC
Confidence            4444455555666666677665554 5778864

>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase

Probab=98.17  E-value=1.9e-05  Score=76.03  Aligned_cols=113  Identities=17%  Similarity=0.211  Sum_probs=75.3

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchh--HHHHHhcCCCCCeEEEE----eCCCcHHhhhCCCcEEE
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPG--VTADISHMDTGAVVRGF----LGQPQLENALTGMDLVI  115 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g--~~~dl~~~~~~~~v~~~----~~~~d~~~al~~aDvVI  115 (354)
                      .++|.|+||+|++|++++..|+..+...+|+++|++....  ...++..    ..+..+    ....++.++++++|+||
T Consensus         4 ~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~----~~~~~v~~Dl~d~~~l~~~~~~iD~Vi   79 (324)
T TIGR03589         4 NKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKFPA----PCLRFFIGDVRDKERLTRALRGVDYVV   79 (324)
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHhCC----CcEEEEEccCCCHHHHHHHHhcCCEEE
Confidence            4689999999999999999998876333899999865221  1112211    112211    11234567788999999


Q ss_pred             EcCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 018512          116 IPAGVPRKP--GMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  159 (354)
Q Consensus       116 i~ag~~~~~--g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~t  159 (354)
                      ++||....+  ..+..+.+..|+.....+.+.+.+.+... ||++|
T Consensus        80 h~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~aa~~~~~~~-iV~~S  124 (324)
T TIGR03589        80 HAAALKQVPAAEYNPFECIRTNINGAQNVIDAAIDNGVKR-VVALS  124 (324)
T ss_pred             ECcccCCCchhhcCHHHHHHHHHHHHHHHHHHHHHcCCCE-EEEEe
Confidence            999864322  22345678899999999999999875444 44443

This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.

>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional

Probab=98.14  E-value=2.7e-05  Score=75.45  Aligned_cols=164  Identities=15%  Similarity=0.103  Sum_probs=92.6

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhC-CCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeC-----CCcHHhhhCCCcEEE
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKIN-PLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLG-----QPQLENALTGMDLVI  115 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~-~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~-----~~d~~~al~~aDvVI  115 (354)
                      +|||+|+||+|++|++++..|+.. +.  +|+.+|+....  ..++...   ..++.+..     ...+.++++++|+||
T Consensus         1 m~~ilVtGatGfiGs~l~~~L~~~~~~--~V~~~~r~~~~--~~~~~~~---~~~~~~~~Dl~~~~~~~~~~~~~~d~Vi   73 (347)
T PRK11908          1 MKKVLILGVNGFIGHHLSKRILETTDW--EVYGMDMQTDR--LGDLVNH---PRMHFFEGDITINKEWIEYHVKKCDVIL   73 (347)
T ss_pred             CcEEEEECCCcHHHHHHHHHHHhCCCC--eEEEEeCcHHH--HHHhccC---CCeEEEeCCCCCCHHHHHHHHcCCCEEE
Confidence            469999999999999999999875 55  89999975311  1122111   11222211     112345678999999


Q ss_pred             EcCCCCCC--CCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCC-CCCc---hHHHHHHHHHhCCC------CCCC
Q 018512          116 IPAGVPRK--PGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNP-VNST---VPIAAEVFKKAGTY------DPKK  183 (354)
Q Consensus       116 i~ag~~~~--~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNP-v~~~---~~~~~~~~~~~~~~------p~~k  183 (354)
                      ++|+....  ...........|+....++++.+++.. . .+|.+|.. +.-.   ..+ .+   ..+-+      ++..
T Consensus        74 H~aa~~~~~~~~~~p~~~~~~n~~~~~~ll~aa~~~~-~-~~v~~SS~~vyg~~~~~~~-~e---e~~~~~~~~~~~p~~  147 (347)
T PRK11908         74 PLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYG-K-HLVFPSTSEVYGMCPDEEF-DP---EASPLVYGPINKPRW  147 (347)
T ss_pred             ECcccCChHHhhcCcHHHHHHHHHHHHHHHHHHHhcC-C-eEEEEecceeeccCCCcCc-Cc---cccccccCcCCCccc
Confidence            99875322  122334456778899999999988764 3 44444321 1000   000 00   00000      1222


Q ss_pred             EEEeccchHHHHHHHHHHHhCCCCCCCc-ceEEeec
Q 018512          184 LLGVTMLDVVRANTFVAEVLGLDPRDVD-VPVVGGH  218 (354)
Q Consensus       184 viG~t~ld~~r~~~~la~~l~v~~~~v~-~~v~G~h  218 (354)
                      .+|.+.....+....+++..|++..-++ +.++|.+
T Consensus       148 ~Y~~sK~~~e~~~~~~~~~~~~~~~ilR~~~v~Gp~  183 (347)
T PRK11908        148 IYACSKQLMDRVIWAYGMEEGLNFTLFRPFNWIGPG  183 (347)
T ss_pred             hHHHHHHHHHHHHHHHHHHcCCCeEEEeeeeeeCCC
Confidence            4555544444455555666777665554 4677754

>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=98.11  E-value=2.1e-05  Score=74.27  Aligned_cols=170  Identities=18%  Similarity=0.103  Sum_probs=99.2

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCC-cEEEEcCCCC
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGM-DLVIIPAGVP  121 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~a-DvVIi~ag~~  121 (354)
                      |+|.|+||+|++|++++..|+..|+  +|+.+|+........+ .+... .... ........+++++. |.||++|+..
T Consensus         1 ~~ILVtG~tGfiG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~-~~~~~-~~~d-~~~~~~~~~~~~~~~d~vih~aa~~   75 (314)
T COG0451           1 MRILVTGGAGFIGSHLVERLLAAGH--DVRGLDRLRDGLDPLL-SGVEF-VVLD-LTDRDLVDELAKGVPDAVIHLAAQS   75 (314)
T ss_pred             CeEEEEcCcccHHHHHHHHHHhCCC--eEEEEeCCCccccccc-cccce-eeec-ccchHHHHHHHhcCCCEEEEccccC
Confidence            4599999999999999999999988  9999998652111111 11110 0000 00112234566777 9999998876


Q ss_pred             CCCCCCH---HHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCCch---HHHHHHHHHhCCCCCCCEEEeccchHHHH
Q 018512          122 RKPGMTR---DDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTV---PIAAEVFKKAGTYDPKKLLGVTMLDVVRA  195 (354)
Q Consensus       122 ~~~g~~r---~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv~~~~---~~~~~~~~~~~~~p~~kviG~t~ld~~r~  195 (354)
                      ..++..+   .++...|+...+++++.+++....-+|...|..+..-.   ..+.|-.  ....| ...+|.+.+...+.
T Consensus        76 ~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~~~~v~~ss~~~~~~~~~~~~~~E~~--~~~~p-~~~Yg~sK~~~E~~  152 (314)
T COG0451          76 SVPDSNASDPAEFLDVNVDGTLNLLEAARAAGVKRFVFASSVSVVYGDPPPLPIDEDL--GPPRP-LNPYGVSKLAAEQL  152 (314)
T ss_pred             chhhhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCCCceECCCCCCCCccccc--CCCCC-CCHHHHHHHHHHHH
Confidence            5444332   35789999999999999998333333332221211100   0001100  11112 12466676666666


Q ss_pred             HHHHHHHhCCCCCCCc-ceEEeecCC
Q 018512          196 NTFVAEVLGLDPRDVD-VPVVGGHAG  220 (354)
Q Consensus       196 ~~~la~~l~v~~~~v~-~~v~G~hg~  220 (354)
                      -...++..|++..-++ ..++|....
T Consensus       153 ~~~~~~~~~~~~~ilR~~~vyGp~~~  178 (314)
T COG0451         153 LRAYARLYGLPVVILRPFNVYGPGDK  178 (314)
T ss_pred             HHHHHHHhCCCeEEEeeeeeeCCCCC
Confidence            5666666677777776 468886544

>TIGR03466 HpnA hopanoid-associated sugar epimerase

Probab=98.10  E-value=3e-05  Score=73.80  Aligned_cols=112  Identities=18%  Similarity=0.211  Sum_probs=75.0

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEE-EeCCCcHHhhhCCCcEEEEcCCCC
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRG-FLGQPQLENALTGMDLVIIPAGVP  121 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~-~~~~~d~~~al~~aDvVIi~ag~~  121 (354)
                      |||.|+||+|++|+.++..|+..+.  +|+++|++....  .++.+... ..+.. .....++.++++++|+||++++..
T Consensus         1 ~~vlItG~~G~iG~~l~~~L~~~g~--~V~~~~r~~~~~--~~~~~~~~-~~~~~D~~~~~~l~~~~~~~d~vi~~a~~~   75 (328)
T TIGR03466         1 MKVLVTGATGFVGSAVVRLLLEQGE--EVRVLVRPTSDR--RNLEGLDV-EIVEGDLRDPASLRKAVAGCRALFHVAADY   75 (328)
T ss_pred             CeEEEECCccchhHHHHHHHHHCCC--EEEEEEecCccc--cccccCCc-eEEEeeCCCHHHHHHHHhCCCEEEEeceec
Confidence            5899999999999999999998887  899999865211  11111110 11111 111234567789999999998754


Q ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 018512          122 RKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  159 (354)
Q Consensus       122 ~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~t  159 (354)
                      ........+....|+.....+++.+.+.+.+.+|.+.|
T Consensus        76 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS  113 (328)
T TIGR03466        76 RLWAPDPEEMYAANVEGTRNLLRAALEAGVERVVYTSS  113 (328)
T ss_pred             ccCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEec
Confidence            33334456677889999999999988775444444333

The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.

>PRK08268 3-hydroxy-acyl-CoA dehydrogenase; Validated

Probab=98.10  E-value=2.8e-05  Score=79.51  Aligned_cols=120  Identities=21%  Similarity=0.280  Sum_probs=77.0

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc---hh--HHHH----HhcCCC---------CCeEEEEeCCCcH
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT---PG--VTAD----ISHMDT---------GAVVRGFLGQPQL  104 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~---~g--~~~d----l~~~~~---------~~~v~~~~~~~d~  104 (354)
                      .||+|||+ |.+|..+|..++..|+  +|+++|+++.   .+  ...+    +.....         ...++.   ++++
T Consensus         8 ~~V~VIGa-G~MG~gIA~~la~aG~--~V~l~D~~~e~l~~~~~~i~~~l~~~~~~G~~~~~~~~~~~~~i~~---~~~~   81 (507)
T PRK08268          8 ATVAVIGA-GAMGAGIAQVAAQAGH--TVLLYDARAGAAAAARDGIAARLAKLVEKGKLTAEQADAALARLRP---VEAL   81 (507)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCC--eEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhCeEE---eCCH
Confidence            58999999 9999999999999998  9999999871   11  1111    111110         012333   3465


Q ss_pred             HhhhCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecCCCCCchHHHHHHHHHhCCCCCCC
Q 018512          105 ENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNSTVPIAAEVFKKAGTYDPKK  183 (354)
Q Consensus       105 ~~al~~aDvVIi~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~-p~a~viv~tNPv~~~~~~~~~~~~~~~~~p~~k  183 (354)
                       +++++||+||.+.              .++..+.+.+...+.+.+ |++  |++||...+-..-+    ...... ++|
T Consensus        82 -~~~~~aDlViEav--------------~E~~~vK~~vf~~l~~~~~~~a--ilasntStl~i~~l----a~~~~~-p~r  139 (507)
T PRK08268         82 -ADLADCDLVVEAI--------------VERLDVKQALFAQLEAIVSPDC--ILATNTSSLSITAI----AAALKH-PER  139 (507)
T ss_pred             -HHhCCCCEEEEcC--------------cccHHHHHHHHHHHHhhCCCCc--EEEECCCCCCHHHH----HhhcCC-ccc
Confidence             5688999999983              455667777778888887 566  44566665443222    222233 467


Q ss_pred             EEEeccc
Q 018512          184 LLGVTML  190 (354)
Q Consensus       184 viG~t~l  190 (354)
                      ++|+-.+
T Consensus       140 ~~G~hff  146 (507)
T PRK08268        140 VAGLHFF  146 (507)
T ss_pred             EEEEeec
Confidence            7776433

>PRK06130 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=98.08  E-value=2.2e-05  Score=75.09  Aligned_cols=120  Identities=23%  Similarity=0.334  Sum_probs=70.5

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc--hhHHHHH----hcC---C----CCCeEEEEeCCCcHHhhh
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADI----SHM---D----TGAVVRGFLGQPQLENAL  108 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~--~g~~~dl----~~~---~----~~~~v~~~~~~~d~~~al  108 (354)
                      .+||+|||+ |.+|..++..|+..|+  +|+++|.++.  ......+    ...   .    ....++.   ++++.+++
T Consensus         4 ~~~I~vIGa-G~mG~~iA~~l~~~g~--~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~---~~~~~~~~   77 (311)
T PRK06130          4 IQNLAIIGA-GTMGSGIAALFARKGL--QVVLIDVMEGALERARGVIERALGVYAPLGIASAGMGRIRM---EAGLAAAV   77 (311)
T ss_pred             ccEEEEECC-CHHHHHHHHHHHhCCC--eEEEEECCHHHHHHHHHHHHHHHHHhhhcccHHHHhhceEE---eCCHHHHh
Confidence            358999999 9999999999998887  8999999761  1111111    100   0    0011222   34666789


Q ss_pred             CCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCC-CeEEEEecCCCCCchHHHHHHHHHhCCCCCCCEEEe
Q 018512          109 TGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCP-NATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV  187 (354)
Q Consensus       109 ~~aDvVIi~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p-~a~viv~tNPv~~~~~~~~~~~~~~~~~p~~kviG~  187 (354)
                      ++||+||++..              .......++...+..+++ +.+  ++||...+...-    +..... .+.+++|+
T Consensus        78 ~~aDlVi~av~--------------~~~~~~~~v~~~l~~~~~~~~i--i~s~tsg~~~~~----l~~~~~-~~~~~ig~  136 (311)
T PRK06130         78 SGADLVIEAVP--------------EKLELKRDVFARLDGLCDPDTI--FATNTSGLPITA----IAQAVT-RPERFVGT  136 (311)
T ss_pred             ccCCEEEEecc--------------CcHHHHHHHHHHHHHhCCCCcE--EEECCCCCCHHH----HHhhcC-CcccEEEE
Confidence            99999999841              122344455556666654 543  346665544321    222211 23577776


Q ss_pred             c
Q 018512          188 T  188 (354)
Q Consensus       188 t  188 (354)
                      .
T Consensus       137 h  137 (311)
T PRK06130        137 H  137 (311)
T ss_pred             c
Confidence            4

>PLN02572 UDP-sulfoquinovose synthase

Probab=98.07  E-value=3e-05  Score=78.05  Aligned_cols=187  Identities=14%  Similarity=0.126  Sum_probs=107.8

Q ss_pred             hhhhhhcccCCCCCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc---hh------------HHHHH---hcC
Q 018512           28 CLRQAKCRAKGGAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT---PG------------VTADI---SHM   89 (354)
Q Consensus        28 ~~~~~~~~~~~~~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~---~g------------~~~dl---~~~   89 (354)
                      +-+.+++.+ +..+.+||.|+||+|++|++++..|+..|.  +|+++|+...   ..            ....+   .+.
T Consensus        34 ~~~~~~~~~-~~~~~k~VLVTGatGfIGs~Lv~~L~~~G~--~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  110 (442)
T PLN02572         34 ATPSAPGSS-SSSKKKKVMVIGGDGYCGWATALHLSKRGY--EVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWKEV  110 (442)
T ss_pred             cCCCCCCCC-ccccCCEEEEECCCcHHHHHHHHHHHHCCC--eEEEEeccccccccccccccccccccchHHHHHHHHHh
Confidence            334555555 456668999999999999999999999887  8999985321   00            00011   100


Q ss_pred             CCCCeEEEE----eCCCcHHhhhC--CCcEEEEcCCCCCCC-CC-C---HHHHHHHHHHHHHHHHHHHhhhCCCeEEEEe
Q 018512           90 DTGAVVRGF----LGQPQLENALT--GMDLVIIPAGVPRKP-GM-T---RDDLFNINAGIVRTLCEGIAKCCPNATVNLI  158 (354)
Q Consensus        90 ~~~~~v~~~----~~~~d~~~al~--~aDvVIi~ag~~~~~-g~-~---r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~  158 (354)
                      . ...++.+    .....+.++++  ++|+||++|+..... .. .   ....+..|+....++++.+++++.+..++.+
T Consensus       111 ~-~~~v~~v~~Dl~d~~~v~~~l~~~~~D~ViHlAa~~~~~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~~gv~~~~V~~  189 (442)
T PLN02572        111 S-GKEIELYVGDICDFEFLSEAFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAIKEFAPDCHLVKL  189 (442)
T ss_pred             h-CCcceEEECCCCCHHHHHHHHHhCCCCEEEECCCcccChhhhcChhhHHHHHHHHHHHHHHHHHHHHHhCCCccEEEE
Confidence            0 0112221    11123445565  489999998653211 11 1   1233567999999999999988765444443


Q ss_pred             c-CCCCCc--hHHHHHH-HH------Hh---CCCCCCCEEEeccchHHHHHHHHHHHhCCCCCCCc-ceEEeecC
Q 018512          159 S-NPVNST--VPIAAEV-FK------KA---GTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVD-VPVVGGHA  219 (354)
Q Consensus       159 t-NPv~~~--~~~~~~~-~~------~~---~~~p~~kviG~t~ld~~r~~~~la~~l~v~~~~v~-~~v~G~hg  219 (354)
                      | .-+...  ..+ .+- +.      ..   .-..+...+|.+.+....+...+++.+|++...++ +.++|.+.
T Consensus       190 SS~~vYG~~~~~~-~E~~i~~~~~~~e~~~~~~~~P~s~Yg~SK~a~E~l~~~~~~~~gl~~v~lR~~~vyGp~~  263 (442)
T PLN02572        190 GTMGEYGTPNIDI-EEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVRT  263 (442)
T ss_pred             ecceecCCCCCCC-cccccccccccccccccCCCCCCCcchhHHHHHHHHHHHHHHhcCCCEEEEecccccCCCC
Confidence            3 211100  000 000 00      00   01223467888877666777778888888766664 66888753

>PRK07530 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=98.07  E-value=1.7e-05  Score=75.23  Aligned_cols=121  Identities=21%  Similarity=0.343  Sum_probs=72.0

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc--hhHHH----HHh----cCCCC--------CeEEEEeCCCc
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTA----DIS----HMDTG--------AVVRGFLGQPQ  103 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~--~g~~~----dl~----~~~~~--------~~v~~~~~~~d  103 (354)
                      .+||+|||+ |.+|..++..|+..|+  +|+++|+++.  .....    .+.    .....        ..++.   +++
T Consensus         4 ~~kI~vIGa-G~mG~~iA~~la~~G~--~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~---~~~   77 (292)
T PRK07530          4 IKKVGVIGA-GQMGNGIAHVCALAGY--DVLLNDVSADRLEAGLATINGNLARQVAKGKISEEARAAALARIST---ATD   77 (292)
T ss_pred             CCEEEEECC-cHHHHHHHHHHHHCCC--eEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhCeEe---eCC
Confidence            358999999 9999999999999998  9999999861  11111    111    11000        11332   346


Q ss_pred             HHhhhCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecCCCCCchHHHHHHHHHhCCCCCC
Q 018512          104 LENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNSTVPIAAEVFKKAGTYDPK  182 (354)
Q Consensus       104 ~~~al~~aDvVIi~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~-p~a~viv~tNPv~~~~~~~~~~~~~~~~~p~~  182 (354)
                      + +++++||+||++..              .+....+.+.+.+.+++ |++++  +||.+.+....    +..... .+.
T Consensus        78 ~-~~~~~aD~Vieavp--------------e~~~~k~~~~~~l~~~~~~~~ii--~s~ts~~~~s~----la~~~~-~~~  135 (292)
T PRK07530         78 L-EDLADCDLVIEAAT--------------EDETVKRKIFAQLCPVLKPEAIL--ATNTSSISITR----LASATD-RPE  135 (292)
T ss_pred             H-HHhcCCCEEEEcCc--------------CCHHHHHHHHHHHHhhCCCCcEE--EEcCCCCCHHH----HHhhcC-Ccc
Confidence            5 56899999999842              12234455566777776 46644  46666544321    122222 235


Q ss_pred             CEEEeccc
Q 018512          183 KLLGVTML  190 (354)
Q Consensus       183 kviG~t~l  190 (354)
                      |++|+..+
T Consensus       136 r~~g~h~~  143 (292)
T PRK07530        136 RFIGIHFM  143 (292)
T ss_pred             cEEEeecc
Confidence            67776433

>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional

Probab=98.06  E-value=5.8e-05  Score=73.10  Aligned_cols=176  Identities=15%  Similarity=0.118  Sum_probs=98.9

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEE----EeCCCcHHhhhC--CCcEEEE
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRG----FLGQPQLENALT--GMDLVII  116 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~----~~~~~d~~~al~--~aDvVIi  116 (354)
                      |||.|+||+|++|++++..|+..|.. .++.+|.....+....+........+..    +....++.++++  ++|+||+
T Consensus         1 mkilITGgtG~iG~~l~~~L~~~g~~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih   79 (352)
T PRK10084          1 MKILVTGGAGFIGSAVVRHIINNTQD-SVVNVDKLTYAGNLESLADVSDSERYVFEHADICDRAELDRIFAQHQPDAVMH   79 (352)
T ss_pred             CeEEEECCCcHHhHHHHHHHHHhCCC-eEEEecCCCccchHHHHHhcccCCceEEEEecCCCHHHHHHHHHhcCCCEEEE
Confidence            69999999999999999999988752 4666776431111111221110111211    111223445564  4899999


Q ss_pred             cCCCCCC--CCCCHHHHHHHHHHHHHHHHHHHhhhC-------CC-eEEEEecCC-CCCchHHHH--------HHHHHhC
Q 018512          117 PAGVPRK--PGMTRDDLFNINAGIVRTLCEGIAKCC-------PN-ATVNLISNP-VNSTVPIAA--------EVFKKAG  177 (354)
Q Consensus       117 ~ag~~~~--~g~~r~d~~~~n~~~~~~i~~~i~~~~-------p~-a~viv~tNP-v~~~~~~~~--------~~~~~~~  177 (354)
                      +|+....  ......+++..|+.....+++.++++.       .. ..++.+|-. +.......-        ..+....
T Consensus        80 ~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~~~~~~~~E~~  159 (352)
T PRK10084         80 LAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDEDKKNAFRFHHISTDEVYGDLPHPDEVENSEELPLFTETT  159 (352)
T ss_pred             CCcccCCcchhcCchhhhhhhhHHHHHHHHHHHHhccccccccccceeEEEecchhhcCCCCccccccccccCCCccccC
Confidence            9986432  112235678899999999999998752       11 234434321 111000000        0000111


Q ss_pred             CCCCCCEEEeccchHHHHHHHHHHHhCCCCCCCc-ceEEeecC
Q 018512          178 TYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVD-VPVVGGHA  219 (354)
Q Consensus       178 ~~p~~kviG~t~ld~~r~~~~la~~l~v~~~~v~-~~v~G~hg  219 (354)
                      .+.+...+|.+.....++-..+++.+|++.-.++ ..++|.+.
T Consensus       160 ~~~p~~~Y~~sK~~~E~~~~~~~~~~g~~~vilr~~~v~Gp~~  202 (352)
T PRK10084        160 AYAPSSPYSASKASSDHLVRAWLRTYGLPTIVTNCSNNYGPYH  202 (352)
T ss_pred             CCCCCChhHHHHHHHHHHHHHHHHHhCCCEEEEeccceeCCCc
Confidence            2334567788777677776777788887665554 56788653

>PRK09260 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=98.04  E-value=2.8e-05  Score=73.73  Aligned_cols=100  Identities=20%  Similarity=0.262  Sum_probs=63.1

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc--hhH---HHHH-----hcCCC--------CCeEEEEeCCCcH
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGV---TADI-----SHMDT--------GAVVRGFLGQPQL  104 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~--~g~---~~dl-----~~~~~--------~~~v~~~~~~~d~  104 (354)
                      .||+|||+ |.+|..+|..|+..|+  +|+++|+++.  ...   ..++     .....        ...++.   +.++
T Consensus         2 ~~V~VIG~-G~mG~~iA~~la~~G~--~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~---~~~~   75 (288)
T PRK09260          2 EKLVVVGA-GVMGRGIAYVFAVSGF--QTTLVDIKQEQLESAQQEIASIFEQGVARGKLTEAARQAALARLSY---SLDL   75 (288)
T ss_pred             cEEEEECc-cHHHHHHHHHHHhCCC--cEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhCeEE---eCcH
Confidence            48999999 9999999999999988  8999999861  111   0111     00000        011332   3567


Q ss_pred             HhhhCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCC-CeEEEEecCCCCC
Q 018512          105 ENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCP-NATVNLISNPVNS  164 (354)
Q Consensus       105 ~~al~~aDvVIi~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p-~a~viv~tNPv~~  164 (354)
                      ++++++||+||.+..              .+....+.+...+.++++ +++  +++|...+
T Consensus        76 ~~~~~~aD~Vi~avp--------------e~~~~k~~~~~~l~~~~~~~~i--l~~~tSt~  120 (288)
T PRK09260         76 KAAVADADLVIEAVP--------------EKLELKKAVFETADAHAPAECY--IATNTSTM  120 (288)
T ss_pred             HHhhcCCCEEEEecc--------------CCHHHHHHHHHHHHhhCCCCcE--EEEcCCCC
Confidence            788999999999842              123344555556777764 553  34555443

>PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated

Probab=98.04  E-value=3.1e-05  Score=74.16  Aligned_cols=103  Identities=24%  Similarity=0.259  Sum_probs=65.0

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc--hh-H---H---HHHhcCCC---------CCeEEEEeCCCc
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PG-V---T---ADISHMDT---------GAVVRGFLGQPQ  103 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~--~g-~---~---~dl~~~~~---------~~~v~~~~~~~d  103 (354)
                      .+||+|||+ |.+|++++..|+..|+  +|+++|+++.  .. .   .   ..+.....         ...++.   +.+
T Consensus         2 ~~~V~VIG~-G~mG~~iA~~la~~G~--~V~v~d~~~~~~~~~~~~~~~~l~~l~~~g~~~~~~~~~~~~~i~~---~~~   75 (308)
T PRK06129          2 MGSVAIIGA-GLIGRAWAIVFARAGH--EVRLWDADPAAAAAAPAYIAGRLEDLAAFDLLDGEAPDAVLARIRV---TDS   75 (308)
T ss_pred             CcEEEEECc-cHHHHHHHHHHHHCCC--eeEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCchhhHHHHhcCeEE---ECc
Confidence            368999998 9999999999999998  9999999861  11 0   0   01211110         011332   357


Q ss_pred             HHhhhCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCCc
Q 018512          104 LENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNST  165 (354)
Q Consensus       104 ~~~al~~aDvVIi~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv~~~  165 (354)
                      +.+++++||+|+.+..              .+....+.+...+.+..++..++ .||.....
T Consensus        76 ~~~a~~~ad~Vi~avp--------------e~~~~k~~~~~~l~~~~~~~~ii-~ssts~~~  122 (308)
T PRK06129         76 LADAVADADYVQESAP--------------ENLELKRALFAELDALAPPHAIL-ASSTSALL  122 (308)
T ss_pred             HHHhhCCCCEEEECCc--------------CCHHHHHHHHHHHHHhCCCcceE-EEeCCCCC
Confidence            7788999999999841              12234444555677666655444 45554433

>PLN02545 3-hydroxybutyryl-CoA dehydrogenase

Probab=98.03  E-value=6.5e-05  Score=71.44  Aligned_cols=103  Identities=22%  Similarity=0.319  Sum_probs=64.5

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCch-hHH--------HHHhcCCC-C-----CeEEEEeCCCcHHhh
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP-GVT--------ADISHMDT-G-----AVVRGFLGQPQLENA  107 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~-g~~--------~dl~~~~~-~-----~~v~~~~~~~d~~~a  107 (354)
                      .||+|||+ |.+|..+|..|+..|.  +|+++|.++.. ...        .++.+... .     ..+.....+++. ++
T Consensus         5 ~~V~vIG~-G~mG~~iA~~l~~~G~--~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~   80 (295)
T PLN02545          5 KKVGVVGA-GQMGSGIAQLAAAAGM--DVWLLDSDPAALSRGLDSISSSLARLVKKGKMSQEEADATLGRIRCTTNL-EE   80 (295)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCC--eEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhceEeeCCH-HH
Confidence            58999999 9999999999999887  99999997611 110        11211110 0     001111123454 67


Q ss_pred             hCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecCCCCCc
Q 018512          108 LTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNST  165 (354)
Q Consensus       108 l~~aDvVIi~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~-p~a~viv~tNPv~~~  165 (354)
                      +++||+||.+.              .++......+...+.++. |+++  ++||-..+.
T Consensus        81 ~~~aD~Vieav--------------~e~~~~k~~v~~~l~~~~~~~~i--l~s~tS~i~  123 (295)
T PLN02545         81 LRDADFIIEAI--------------VESEDLKKKLFSELDRICKPSAI--LASNTSSIS  123 (295)
T ss_pred             hCCCCEEEEcC--------------ccCHHHHHHHHHHHHhhCCCCcE--EEECCCCCC
Confidence            89999999984              333455666666677766 5663  346666554

>TIGR01472 gmd GDP-mannose 4,6-dehydratase

Probab=98.03  E-value=8.5e-05  Score=71.83  Aligned_cols=159  Identities=13%  Similarity=0.021  Sum_probs=90.7

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc---hhHHHHHh-cCC--CCCeEEEE----eCCCcHHhhhCC--
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT---PGVTADIS-HMD--TGAVVRGF----LGQPQLENALTG--  110 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~---~g~~~dl~-~~~--~~~~v~~~----~~~~d~~~al~~--  110 (354)
                      ++|.|+||+|++|++++..|+..|.  +|+++|+...   ......+. +..  ....+..+    .....+.+++++  
T Consensus         1 ~~vlVTGatGfIG~~l~~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~   78 (343)
T TIGR01472         1 KIALITGITGQDGSYLAEFLLEKGY--EVHGLIRRSSSFNTQRIEHIYEDPHNVNKARMKLHYGDLTDSSNLRRIIDEIK   78 (343)
T ss_pred             CeEEEEcCCCcHHHHHHHHHHHCCC--EEEEEecCCcccchhhhhhhhhccccccccceeEEEeccCCHHHHHHHHHhCC
Confidence            4899999999999999999999888  8999998642   11111121 000  01112221    111234456664  


Q ss_pred             CcEEEEcCCCCCCC-C-CCHHHHHHHHHHHHHHHHHHHhhhCC-C-eEEEEec-CCCCC-chHHHHHHHHHhCCCCCCCE
Q 018512          111 MDLVIIPAGVPRKP-G-MTRDDLFNINAGIVRTLCEGIAKCCP-N-ATVNLIS-NPVNS-TVPIAAEVFKKAGTYDPKKL  184 (354)
Q Consensus       111 aDvVIi~ag~~~~~-g-~~r~d~~~~n~~~~~~i~~~i~~~~p-~-a~viv~t-NPv~~-~~~~~~~~~~~~~~~p~~kv  184 (354)
                      .|+||++|+..... . ......+..|+....++++.+.+.+- + ..++.+| .-+.- ....   .......+.+...
T Consensus        79 ~d~ViH~Aa~~~~~~~~~~~~~~~~~n~~gt~~ll~a~~~~~~~~~~~~v~~SS~~vyg~~~~~---~~~E~~~~~p~~~  155 (343)
T TIGR01472        79 PTEIYNLAAQSHVKVSFEIPEYTADVDGIGTLRLLEAVRTLGLIKSVKFYQASTSELYGKVQEI---PQNETTPFYPRSP  155 (343)
T ss_pred             CCEEEECCcccccchhhhChHHHHHHHHHHHHHHHHHHHHhCCCcCeeEEEeccHHhhCCCCCC---CCCCCCCCCCCCh
Confidence            59999999864321 1 11234446688888999999988652 2 2444433 21110 0000   0011112334556


Q ss_pred             EEeccchHHHHHHHHHHHhCCC
Q 018512          185 LGVTMLDVVRANTFVAEVLGLD  206 (354)
Q Consensus       185 iG~t~ld~~r~~~~la~~l~v~  206 (354)
                      +|.+.+...++...+++.+|++
T Consensus       156 Y~~sK~~~e~~~~~~~~~~~~~  177 (343)
T TIGR01472       156 YAAAKLYAHWITVNYREAYGLF  177 (343)
T ss_pred             hHHHHHHHHHHHHHHHHHhCCc
Confidence            7777666777777777777765

Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).

>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional

Probab=98.03  E-value=0.0001  Score=71.51  Aligned_cols=176  Identities=16%  Similarity=0.098  Sum_probs=98.8

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEE----EeCCCcHHhhhCC--CcEEEE
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRG----FLGQPQLENALTG--MDLVII  116 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~----~~~~~d~~~al~~--aDvVIi  116 (354)
                      +||.|+||+|++|++++..|+..+.. .++++|.....+....+.+......+..    +....++.+++++  +|+||+
T Consensus         2 ~~vlVtGatGfIG~~l~~~L~~~g~~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~D~Vih   80 (355)
T PRK10217          2 RKILITGGAGFIGSALVRYIINETSD-AVVVVDKLTYAGNLMSLAPVAQSERFAFEKVDICDRAELARVFTEHQPDCVMH   80 (355)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHHcCCC-EEEEEecCccccchhhhhhcccCCceEEEECCCcChHHHHHHHhhcCCCEEEE
Confidence            58999999999999999999988852 4667786532111112221110111111    1112234556664  899999


Q ss_pred             cCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHhhhC-------CC-eEEEEecCC-CCCchHHHHHHHHHhCCCCCCCEE
Q 018512          117 PAGVPRKP--GMTRDDLFNINAGIVRTLCEGIAKCC-------PN-ATVNLISNP-VNSTVPIAAEVFKKAGTYDPKKLL  185 (354)
Q Consensus       117 ~ag~~~~~--g~~r~d~~~~n~~~~~~i~~~i~~~~-------p~-a~viv~tNP-v~~~~~~~~~~~~~~~~~p~~kvi  185 (354)
                      +|+.....  .......+..|+.....+++.+.++.       +. ..++.+|.. +.....-....+.......+...+
T Consensus        81 ~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~E~~~~~p~s~Y  160 (355)
T PRK10217         81 LAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDEVYGDLHSTDDFFTETTPYAPSSPY  160 (355)
T ss_pred             CCcccCcchhhhChHHHHHHhhHHHHHHHHHHHHhhhcccccccCceEEEEecchhhcCCCCCCCCCcCCCCCCCCCChh
Confidence            99865321  11235567889999999999998752       11 244444432 110000000000011122334557


Q ss_pred             EeccchHHHHHHHHHHHhCCCCCCCc-ceEEeecC
Q 018512          186 GVTMLDVVRANTFVAEVLGLDPRDVD-VPVVGGHA  219 (354)
Q Consensus       186 G~t~ld~~r~~~~la~~l~v~~~~v~-~~v~G~hg  219 (354)
                      |.+.+...++...+++.++++..-++ ..++|.+.
T Consensus       161 ~~sK~~~e~~~~~~~~~~~~~~~i~r~~~v~Gp~~  195 (355)
T PRK10217        161 SASKASSDHLVRAWLRTYGLPTLITNCSNNYGPYH  195 (355)
T ss_pred             HHHHHHHHHHHHHHHHHhCCCeEEEeeeeeeCCCC
Confidence            77776667777777888887665554 56778653

>PRK06194 hypothetical protein; Provisional

Probab=98.02  E-value=7e-05  Score=70.23  Aligned_cols=159  Identities=19%  Similarity=0.138  Sum_probs=90.5

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCCCCeEEEEe-CCC---cHHhhhC------
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQP---QLENALT------  109 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~~~~v~~~~-~~~---d~~~al~------  109 (354)
                      .++|.|+||+|++|++++..|+..|.  +|+++|++.  ......++....  ..+..+. +-+   +++++++      
T Consensus         6 ~k~vlVtGasggIG~~la~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~d~~~~~~~~~~~~~~~   81 (287)
T PRK06194          6 GKVAVITGAASGFGLAFARIGAALGM--KLVLADVQQDALDRAVAELRAQG--AEVLGVRTDVSDAAQVEALADAALERF   81 (287)
T ss_pred             CCEEEEeCCccHHHHHHHHHHHHCCC--EEEEEeCChHHHHHHHHHHHhcC--CeEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            35899999999999999999999987  899999875  222333333221  2222221 112   2333333      


Q ss_pred             -CCcEEEEcCCCCCCC---CCCHH---HHHHHHHHHHHH----HHHHHhhhCCC-----eEEEEecCCCCCchHHHHHHH
Q 018512          110 -GMDLVIIPAGVPRKP---GMTRD---DLFNINAGIVRT----LCEGIAKCCPN-----ATVNLISNPVNSTVPIAAEVF  173 (354)
Q Consensus       110 -~aDvVIi~ag~~~~~---g~~r~---d~~~~n~~~~~~----i~~~i~~~~p~-----a~viv~tNPv~~~~~~~~~~~  173 (354)
                       ..|+||++||.....   ..+..   ..+..|+.....    +.+.+.+.+.+     +.++++|.-....        
T Consensus        82 g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~--------  153 (287)
T PRK06194         82 GAVHLLFNNAGVGAGGLVWENSLADWEWVLGVNLWGVIHGVRAFTPLMLAAAEKDPAYEGHIVNTASMAGLL--------  153 (287)
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhcc--------
Confidence             469999999875321   12222   234556554444    44445555432     5566655422111        


Q ss_pred             HHhCCCCCCCEEEeccchHHHHHHHHHHHhCCCCCCCcceEEe
Q 018512          174 KKAGTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVVG  216 (354)
Q Consensus       174 ~~~~~~p~~kviG~t~ld~~r~~~~la~~l~v~~~~v~~~v~G  216 (354)
                          +.|..-.++.+......+...++..++.....+++..+.
T Consensus       154 ----~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~irv~~v~  192 (287)
T PRK06194        154 ----APPAMGIYNVSKHAVVSLTETLYQDLSLVTDQVGASVLC  192 (287)
T ss_pred             ----CCCCCcchHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEE
Confidence                233334566655555566777777777665566554444

>PLN02896 cinnamyl-alcohol dehydrogenase

Probab=98.02  E-value=6.4e-05  Score=73.03  Aligned_cols=173  Identities=17%  Similarity=0.097  Sum_probs=96.0

Q ss_pred             CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchh--HHHHHhcCCCCCeEEEEeC----CCcHHhhhCCCcEE
Q 018512           41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPG--VTADISHMDTGAVVRGFLG----QPQLENALTGMDLV  114 (354)
Q Consensus        41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g--~~~dl~~~~~~~~v~~~~~----~~d~~~al~~aDvV  114 (354)
                      ..|||.|+||+|++|++++..|+..|.  +|++++++....  ...++..   ...+..+..    ..++.+++++.|+|
T Consensus         9 ~~~~vLVtG~~GfIG~~l~~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~~~~~~~~~d~V   83 (353)
T PLN02896          9 ATGTYCVTGATGYIGSWLVKLLLQRGY--TVHATLRDPAKSLHLLSKWKE---GDRLRLFRADLQEEGSFDEAVKGCDGV   83 (353)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC--EEEEEeCChHHHHHHHHhhcc---CCeEEEEECCCCCHHHHHHHHcCCCEE
Confidence            357999999999999999999999887  888888764211  1112211   122222211    12345677899999


Q ss_pred             EEcCCCCCCC---C-CCHHH-----HHHHHHHHHHHHHHHHhhhCCCeEEEEecC-CCCCch-------HHHHHH----H
Q 018512          115 IIPAGVPRKP---G-MTRDD-----LFNINAGIVRTLCEGIAKCCPNATVNLISN-PVNSTV-------PIAAEV----F  173 (354)
Q Consensus       115 Ii~ag~~~~~---g-~~r~d-----~~~~n~~~~~~i~~~i~~~~p~a~viv~tN-Pv~~~~-------~~~~~~----~  173 (354)
                      |++|+.....   . ....+     .+..|+....++++.+++...-..++++|. -+....       ....|-    +
T Consensus        84 ih~A~~~~~~~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~~~E~~~~p~  163 (353)
T PLN02896         84 FHVAASMEFDVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKSKTVKRVVFTSSISTLTAKDSNGRWRAVVDETCQTPI  163 (353)
T ss_pred             EECCccccCCccccccchhhhhhHHhHHHHHHHHHHHHHHHHhcCCccEEEEEechhhccccccCCCCCCccCcccCCcH
Confidence            9999864321   1 11222     233445788888888877642223444432 111100       000000    0


Q ss_pred             HH-hCCCCCCCEEEeccchHHHHHHHHHHHhCCCCCCCc-ceEEeec
Q 018512          174 KK-AGTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVD-VPVVGGH  218 (354)
Q Consensus       174 ~~-~~~~p~~kviG~t~ld~~r~~~~la~~l~v~~~~v~-~~v~G~h  218 (354)
                      .. ....++.-.+|.+.+...++...+++..|++..-++ ..++|.+
T Consensus       164 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~vyGp~  210 (353)
T PLN02896        164 DHVWNTKASGWVYVLSKLLTEEAAFKYAKENGIDLVSVITTTVAGPF  210 (353)
T ss_pred             HHhhccCCCCccHHHHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCC
Confidence            00 000112225777766667777777877787655554 5667754

>PRK07531 bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioesterase; Validated

Probab=98.02  E-value=4.7e-05  Score=77.74  Aligned_cols=103  Identities=15%  Similarity=0.152  Sum_probs=67.7

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCch-hHHHH--------HhcCC---C--CCeEEEEeCCCcHHhhh
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP-GVTAD--------ISHMD---T--GAVVRGFLGQPQLENAL  108 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~-g~~~d--------l~~~~---~--~~~v~~~~~~~d~~~al  108 (354)
                      +||+|||+ |.+|+.+|..|+..|+  +|+++|+++.. ....+        +....   .  ...++.   ++++.+++
T Consensus         5 ~kIavIG~-G~MG~~iA~~la~~G~--~V~v~D~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~i~~---~~~~~ea~   78 (495)
T PRK07531          5 MKAACIGG-GVIGGGWAARFLLAGI--DVAVFDPHPEAERIIGEVLANAERAYAMLTDAPLPPEGRLTF---CASLAEAV   78 (495)
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCC--eEEEEeCCHHHHHHHHHHHHHHHHHHhhhccchhhhhhceEe---eCCHHHHh
Confidence            58999999 9999999999999998  99999998621 11110        11000   0  011332   35677889


Q ss_pred             CCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCCch
Q 018512          109 TGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTV  166 (354)
Q Consensus       109 ~~aDvVIi~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv~~~~  166 (354)
                      ++||+||.+.              ..+..+.+.+...+.++++... ++.||..++..
T Consensus        79 ~~aD~Vieav--------------pe~~~vk~~l~~~l~~~~~~~~-iI~SsTsgi~~  121 (495)
T PRK07531         79 AGADWIQESV--------------PERLDLKRRVLAEIDAAARPDA-LIGSSTSGFLP  121 (495)
T ss_pred             cCCCEEEEcC--------------cCCHHHHHHHHHHHHhhCCCCc-EEEEcCCCCCH
Confidence            9999999974              2234455666666777775442 45677777554

>PLN02778 3,5-epimerase/4-reductase

Probab=98.01  E-value=9.9e-05  Score=70.30  Aligned_cols=97  Identities=22%  Similarity=0.175  Sum_probs=66.0

Q ss_pred             CCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhh--CCCcEEEEc
Q 018512           40 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENAL--TGMDLVIIP  117 (354)
Q Consensus        40 ~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al--~~aDvVIi~  117 (354)
                      ...|||.|+||+|++|++++..|...|+  +|++...+.        .+.            ..+..++  .++|+||++
T Consensus         7 ~~~~kiLVtG~tGfiG~~l~~~L~~~g~--~V~~~~~~~--------~~~------------~~v~~~l~~~~~D~ViH~   64 (298)
T PLN02778          7 SATLKFLIYGKTGWIGGLLGKLCQEQGI--DFHYGSGRL--------ENR------------ASLEADIDAVKPTHVFNA   64 (298)
T ss_pred             CCCCeEEEECCCCHHHHHHHHHHHhCCC--EEEEecCcc--------CCH------------HHHHHHHHhcCCCEEEEC
Confidence            3458999999999999999999999887  776543221        000            0011222  268999999


Q ss_pred             CCCCCCCC-----CCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 018512          118 AGVPRKPG-----MTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  159 (354)
Q Consensus       118 ag~~~~~g-----~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~t  159 (354)
                      |+....+.     ....+....|+....++++.+++.+.+ ++++.|
T Consensus        65 Aa~~~~~~~~~~~~~p~~~~~~Nv~gt~~ll~aa~~~gv~-~v~~sS  110 (298)
T PLN02778         65 AGVTGRPNVDWCESHKVETIRANVVGTLTLADVCRERGLV-LTNYAT  110 (298)
T ss_pred             CcccCCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCC-EEEEec
Confidence            98653221     234567889999999999999988654 344333

>PRK10675 UDP-galactose-4-epimerase; Provisional

Probab=98.01  E-value=7.3e-05  Score=71.82  Aligned_cols=111  Identities=18%  Similarity=0.202  Sum_probs=70.3

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCC-CCCe-EEE-EeCCCcHHhhhC--CCcEEE
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMD-TGAV-VRG-FLGQPQLENALT--GMDLVI  115 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~-~~~~-v~~-~~~~~d~~~al~--~aDvVI  115 (354)
                      |||.|+||+|++|++++..|+..+.  +|+++|+..  .......+.+.. .... +.. ......+.++++  ++|+||
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~g~--~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vv   78 (338)
T PRK10675          1 MRVLVTGGSGYIGSHTCVQLLQNGH--DVVILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALLTEILHDHAIDTVI   78 (338)
T ss_pred             CeEEEECCCChHHHHHHHHHHHCCC--eEEEEecCCCchHhHHHHHHHhcCCCceEEEccCCCHHHHHHHHhcCCCCEEE
Confidence            6999999999999999999998887  899998643  111111122211 1111 111 111112334454  689999


Q ss_pred             EcCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHhhhCCCeEE
Q 018512          116 IPAGVPRKP--GMTRDDLFNINAGIVRTLCEGIAKCCPNATV  155 (354)
Q Consensus       116 i~ag~~~~~--g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~v  155 (354)
                      ++|+.....  .....+.+..|+.....+++.+++...+.+|
T Consensus        79 h~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v  120 (338)
T PRK10675         79 HFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNLI  120 (338)
T ss_pred             ECCccccccchhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEE
Confidence            998764321  1234567888999999999999877544444

>PLN02989 cinnamyl-alcohol dehydrogenase family protein

Probab=97.98  E-value=0.00023  Score=68.16  Aligned_cols=175  Identities=16%  Similarity=0.062  Sum_probs=97.7

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCch-hHHHHHhc-CCCCCeEEEE----eCCCcHHhhhCCCcEEE
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP-GVTADISH-MDTGAVVRGF----LGQPQLENALTGMDLVI  115 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~-g~~~dl~~-~~~~~~v~~~----~~~~d~~~al~~aDvVI  115 (354)
                      .++|.|+||+|++|++++..|+..|.  +|++.+++... .....+.. ......+..+    ....++.++++++|+||
T Consensus         5 ~k~vlVtG~~G~IG~~l~~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi   82 (325)
T PLN02989          5 GKVVCVTGASGYIASWIVKLLLFRGY--TINATVRDPKDRKKTDHLLALDGAKERLKLFKADLLDEGSFELAIDGCETVF   82 (325)
T ss_pred             CCEEEEECCchHHHHHHHHHHHHCCC--EEEEEEcCCcchhhHHHHHhccCCCCceEEEeCCCCCchHHHHHHcCCCEEE
Confidence            46899999999999999999999988  88887766521 11111111 1111122221    12234567788999999


Q ss_pred             EcCCCCCCC-C-CCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecC-CCCCchH--HH-HHHHHHhCCCC------CCC
Q 018512          116 IPAGVPRKP-G-MTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISN-PVNSTVP--IA-AEVFKKAGTYD------PKK  183 (354)
Q Consensus       116 i~ag~~~~~-g-~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tN-Pv~~~~~--~~-~~~~~~~~~~p------~~k  183 (354)
                      ++|+..... . ......+..|+....++.+.+.++.....|+++|. .+..-..  .. ...+.......      +..
T Consensus        83 h~A~~~~~~~~~~~~~~~~~~n~~g~~~ll~a~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~~E~~~~~p~~~~~~~~  162 (325)
T PLN02989         83 HTASPVAITVKTDPQVELINPAVNGTINVLRTCTKVSSVKRVILTSSMAAVLAPETKLGPNDVVDETFFTNPSFAEERKQ  162 (325)
T ss_pred             EeCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHcCCceEEEEecchhheecCCccCCCCCccCcCCCCchhHhccccc
Confidence            999854211 1 12245667899999999999887642234444432 1110000  00 00000100011      123


Q ss_pred             EEEeccchHHHHHHHHHHHhCCCCCCCc-ceEEeec
Q 018512          184 LLGVTMLDVVRANTFVAEVLGLDPRDVD-VPVVGGH  218 (354)
Q Consensus       184 viG~t~ld~~r~~~~la~~l~v~~~~v~-~~v~G~h  218 (354)
                      .+|.+.+...++...+++..|++..-++ +.++|..
T Consensus       163 ~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~  198 (325)
T PLN02989        163 WYVLSKTLAEDAAWRFAKDNEIDLIVLNPGLVTGPI  198 (325)
T ss_pred             chHHHHHHHHHHHHHHHHHcCCeEEEEcCCceeCCC
Confidence            5666666566666666777777655554 5677754

>COG0240 GpsA Glycerol-3-phosphate dehydrogenase [Energy production and conversion]

Probab=97.98  E-value=0.00014  Score=69.48  Aligned_cols=117  Identities=21%  Similarity=0.386  Sum_probs=78.1

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHh--cCC--C------CCeEEEEeCCCcHHhhhCCC
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADIS--HMD--T------GAVVRGFLGQPQLENALTGM  111 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~--~~~--~------~~~v~~~~~~~d~~~al~~a  111 (354)
                      ++||+|+|+ |.-|+++|..|..+++  +|+|+.+++.  .+.++.  |..  +      .+.++   .++|+.+++++|
T Consensus         1 ~~kI~ViGa-GswGTALA~~la~ng~--~V~lw~r~~~--~~~~i~~~~~N~~yLp~i~lp~~l~---at~Dl~~a~~~a   72 (329)
T COG0240           1 MMKIAVIGA-GSWGTALAKVLARNGH--EVRLWGRDEE--IVAEINETRENPKYLPGILLPPNLK---ATTDLAEALDGA   72 (329)
T ss_pred             CceEEEEcC-ChHHHHHHHHHHhcCC--eeEEEecCHH--HHHHHHhcCcCccccCCccCCcccc---cccCHHHHHhcC
Confidence            479999999 9999999999999997  9999999762  222232  221  1      12233   357899999999


Q ss_pred             cEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEec---CCCCCchHHHHHHHHHhCCCCCCCEEEe
Q 018512          112 DLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLIS---NPVNSTVPIAAEVFKKAGTYDPKKLLGV  187 (354)
Q Consensus       112 DvVIi~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~-p~a~viv~t---NPv~~~~~~~~~~~~~~~~~p~~kviG~  187 (354)
                      |+||+..  |              ...++++++++..+- ++..++.+|   +|-..  .++++++++.  +|.++ ++.
T Consensus        73 d~iv~av--P--------------s~~~r~v~~~l~~~l~~~~~iv~~sKGie~~t~--~l~seii~e~--l~~~~-~~v  131 (329)
T COG0240          73 DIIVIAV--P--------------SQALREVLRQLKPLLLKDAIIVSATKGLEPETG--RLLSEIIEEE--LPDNP-IAV  131 (329)
T ss_pred             CEEEEEC--C--------------hHHHHHHHHHHhhhccCCCeEEEEeccccCCCc--chHHHHHHHH--cCCCe-EEE
Confidence            9999973  3              235666777775443 677777776   44322  2336666665  44444 444

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=97.97  E-value=0.00017  Score=76.19  Aligned_cols=180  Identities=15%  Similarity=0.025  Sum_probs=97.2

Q ss_pred             CCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeC-CCc---HHhhh--CCCcE
Q 018512           40 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLG-QPQ---LENAL--TGMDL  113 (354)
Q Consensus        40 ~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~-~~d---~~~al--~~aDv  113 (354)
                      .+++||.|+||+|++|++++..|+..+...+|+.+|..........+........++.+.. -.|   +...+  .++|+
T Consensus         4 ~~~~~VLVTGatGfIG~~lv~~Ll~~g~~~~V~~~d~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~D~   83 (668)
T PLN02260          4 YEPKNILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYCSNLKNLNPSKSSPNFKFVKGDIASADLVNYLLITEGIDT   83 (668)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHhCCCCEEEEEeCCCccchhhhhhhcccCCCeEEEECCCCChHHHHHHHhhcCCCE
Confidence            3567999999999999999999998754448999997531111111111101122332211 112   22223  68999


Q ss_pred             EEEcCCCCCCCC--CCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecC-CCCCchHHHH-HHHHHhCCCCCCCEEEecc
Q 018512          114 VIIPAGVPRKPG--MTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISN-PVNSTVPIAA-EVFKKAGTYDPKKLLGVTM  189 (354)
Q Consensus       114 VIi~ag~~~~~g--~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tN-Pv~~~~~~~~-~~~~~~~~~p~~kviG~t~  189 (354)
                      ||++|+......  ....++...|+.....+++.+++.+.-..+|.+|. -+.-...--. ........+.+...+|.+.
T Consensus        84 ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~vkr~I~~SS~~vyg~~~~~~~~~~~E~~~~~p~~~Y~~sK  163 (668)
T PLN02260         84 IMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDADVGNHEASQLLPTNPYSATK  163 (668)
T ss_pred             EEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEcchHHhCCCccccccCccccCCCCCCCCcHHHH
Confidence            999998653211  12345678899999999999998763233444432 1100000000 0000000111234566665


Q ss_pred             chHHHHHHHHHHHhCCCCCCCc-ceEEeecC
Q 018512          190 LDVVRANTFVAEVLGLDPRDVD-VPVVGGHA  219 (354)
Q Consensus       190 ld~~r~~~~la~~l~v~~~~v~-~~v~G~hg  219 (354)
                      +...++-..+++..+++..-++ ..++|.+.
T Consensus       164 ~~aE~~v~~~~~~~~l~~vilR~~~VyGp~~  194 (668)
T PLN02260        164 AGAEMLVMAYGRSYGLPVITTRGNNVYGPNQ  194 (668)
T ss_pred             HHHHHHHHHHHHHcCCCEEEECcccccCcCC
Confidence            5555555555666676654444 56777653

>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B

Probab=97.92  E-value=0.00016  Score=63.08  Aligned_cols=93  Identities=26%  Similarity=0.300  Sum_probs=66.0

Q ss_pred             EEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeC-C---CcHHhhhCCCcEEEEcCCC
Q 018512           45 VAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLG-Q---PQLENALTGMDLVIIPAGV  120 (354)
Q Consensus        45 I~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~-~---~d~~~al~~aDvVIi~ag~  120 (354)
                      |+|+||+|++|+.++..|+.+++  +|+++-+++.+.  .+  +    +.++.+.. .   .++.++++++|.||.++|.
T Consensus         1 I~V~GatG~vG~~l~~~L~~~~~--~V~~~~R~~~~~--~~--~----~~~~~~~~d~~d~~~~~~al~~~d~vi~~~~~   70 (183)
T PF13460_consen    1 ILVFGATGFVGRALAKQLLRRGH--EVTALVRSPSKA--ED--S----PGVEIIQGDLFDPDSVKAALKGADAVIHAAGP   70 (183)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTS--EEEEEESSGGGH--HH--C----TTEEEEESCTTCHHHHHHHHTTSSEEEECCHS
T ss_pred             eEEECCCChHHHHHHHHHHHCCC--EEEEEecCchhc--cc--c----cccccceeeehhhhhhhhhhhhcchhhhhhhh
Confidence            78999999999999999999996  999999876321  11  1    22332211 1   2357889999999999865


Q ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEe
Q 018512          121 PRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLI  158 (354)
Q Consensus       121 ~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~  158 (354)
                      +.+      |     ....+.+++.+++.+..-+|++.
T Consensus        71 ~~~------~-----~~~~~~~~~a~~~~~~~~~v~~s   97 (183)
T PF13460_consen   71 PPK------D-----VDAAKNIIEAAKKAGVKRVVYLS   97 (183)
T ss_dssp             TTT------H-----HHHHHHHHHHHHHTTSSEEEEEE
T ss_pred             hcc------c-----ccccccccccccccccccceeee
Confidence            543      1     67788888888887655444433

...

>PLN02583 cinnamoyl-CoA reductase

Probab=97.91  E-value=0.00027  Score=67.13  Aligned_cols=112  Identities=15%  Similarity=0.118  Sum_probs=72.3

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCch----hHHHHHhcCCCCCeEEEE----eCCCcHHhhhCCCcE
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP----GVTADISHMDTGAVVRGF----LGQPQLENALTGMDL  113 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~----g~~~dl~~~~~~~~v~~~----~~~~d~~~al~~aDv  113 (354)
                      .++|+|+||+|++|++++..|+.+|+  +|++.+++...    ....++....  ..+..+    ....++.+++.++|.
T Consensus         6 ~k~vlVTGatG~IG~~lv~~Ll~~G~--~V~~~~R~~~~~~~~~~~~~l~~~~--~~~~~~~~Dl~d~~~~~~~l~~~d~   81 (297)
T PLN02583          6 SKSVCVMDASGYVGFWLVKRLLSRGY--TVHAAVQKNGETEIEKEIRGLSCEE--ERLKVFDVDPLDYHSILDALKGCSG   81 (297)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCC--EEEEEEcCchhhhHHHHHHhcccCC--CceEEEEecCCCHHHHHHHHcCCCE
Confidence            35899999999999999999999998  88888774311    1112221111  112221    122345678999999


Q ss_pred             EEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCeEEEE
Q 018512          114 VIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNL  157 (354)
Q Consensus       114 VIi~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~-p~a~viv  157 (354)
                      |+..++.+........+.+..|+.....+.+.+.+.. ...+|++
T Consensus        82 v~~~~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~riV~~  126 (297)
T PLN02583         82 LFCCFDPPSDYPSYDEKMVDVEVRAAHNVLEACAQTDTIEKVVFT  126 (297)
T ss_pred             EEEeCccCCcccccHHHHHHHHHHHHHHHHHHHHhcCCccEEEEe
Confidence            9987654432111234677889999999999988763 3444433

>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional

Probab=97.91  E-value=0.00014  Score=74.79  Aligned_cols=116  Identities=14%  Similarity=0.064  Sum_probs=73.6

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc--hhHHHHHhc-----CCC--CCeEEEE----eCCCcHHhhh
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISH-----MDT--GAVVRGF----LGQPQLENAL  108 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~--~g~~~dl~~-----~~~--~~~v~~~----~~~~d~~~al  108 (354)
                      ...|+|+||+|++|+.++..|+..|.  +|++++++..  .....++.+     ...  ...+..+    ....++.+++
T Consensus        80 gKvVLVTGATGgIG~aLAr~LLk~G~--~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~esI~~aL  157 (576)
T PLN03209         80 EDLAFVAGATGKVGSRTVRELLKLGF--RVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQIGPAL  157 (576)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCC--eEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHHHHHHHh
Confidence            45799999999999999999999887  8999998762  212222211     010  0112221    1112455678


Q ss_pred             CCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 018512          109 TGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  159 (354)
Q Consensus       109 ~~aDvVIi~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~t  159 (354)
                      .++|+||+++|............+..|.....++++.+.+.+...+|++.|
T Consensus       158 ggiDiVVn~AG~~~~~v~d~~~~~~VN~~Gt~nLl~Aa~~agVgRIV~VSS  208 (576)
T PLN03209        158 GNASVVICCIGASEKEVFDVTGPYRIDYLATKNLVDAATVAKVNHFILVTS  208 (576)
T ss_pred             cCCCEEEEccccccccccchhhHHHHHHHHHHHHHHHHHHhCCCEEEEEcc
Confidence            999999999886533211222345668888899999988776554444444

>PLN02986 cinnamyl-alcohol dehydrogenase family protein

Probab=97.90  E-value=0.00035  Score=66.82  Aligned_cols=106  Identities=17%  Similarity=0.131  Sum_probs=68.0

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc-hhHHHHHhcC-CCCCeEEEE----eCCCcHHhhhCCCcEEE
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT-PGVTADISHM-DTGAVVRGF----LGQPQLENALTGMDLVI  115 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~-~g~~~dl~~~-~~~~~v~~~----~~~~d~~~al~~aDvVI  115 (354)
                      .++|.|+||+|++|++++..|+..|.  +|++..++.. ......+... .....+..+    .....+.++++++|+||
T Consensus         5 ~~~vlVTGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi   82 (322)
T PLN02986          5 GKLVCVTGASGYIASWIVKLLLLRGY--TVKATVRDLTDRKKTEHLLALDGAKERLKLFKADLLEESSFEQAIEGCDAVF   82 (322)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC--EEEEEECCCcchHHHHHHHhccCCCCceEEEecCCCCcchHHHHHhCCCEEE
Confidence            35999999999999999999999887  7776555442 1122222211 111122222    11234567789999999


Q ss_pred             EcCCCCCCC-CCCHHHHHHHHHHHHHHHHHHHhhh
Q 018512          116 IPAGVPRKP-GMTRDDLFNINAGIVRTLCEGIAKC  149 (354)
Q Consensus       116 i~ag~~~~~-g~~r~d~~~~n~~~~~~i~~~i~~~  149 (354)
                      ++|+..... .....+++..|+....++.+.+++.
T Consensus        83 h~A~~~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~  117 (322)
T PLN02986         83 HTASPVFFTVKDPQTELIDPALKGTINVLNTCKET  117 (322)
T ss_pred             EeCCCcCCCCCCchhhhhHHHHHHHHHHHHHHHhc
Confidence            999853211 1122345678999999999998875

>TIGR03026 NDP-sugDHase nucleotide sugar dehydrogenase

Probab=97.88  E-value=0.0003  Score=70.15  Aligned_cols=119  Identities=24%  Similarity=0.327  Sum_probs=72.9

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCC----------------CCCeEEEEeCCCcHHh
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMD----------------TGAVVRGFLGQPQLEN  106 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~----------------~~~~v~~~~~~~d~~~  106 (354)
                      |||+|||. |.+|..+|..|+..|+  +|+++|+++..  +.++....                ....++.   ++++.+
T Consensus         1 mkI~vIGl-G~~G~~lA~~La~~G~--~V~~~d~~~~~--v~~l~~g~~~~~e~~l~~~~~~~~~~g~l~~---~~~~~~   72 (411)
T TIGR03026         1 MKIAVIGL-GYVGLPLAALLADLGH--EVTGVDIDQEK--VDKLNKGKSPIYEPGLDELLAKALAAGRLRA---TTDYED   72 (411)
T ss_pred             CEEEEECC-CchhHHHHHHHHhcCC--eEEEEECCHHH--HHHhhcCCCCCCCCCHHHHHHHhhhcCCeEE---ECCHHH
Confidence            68999999 9999999999999998  89999997621  12222210                0011332   346677


Q ss_pred             hhCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEe-cCCCCCchHHHHHHHHH
Q 018512          107 ALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLI-SNPVNSTVPIAAEVFKK  175 (354)
Q Consensus       107 al~~aDvVIi~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~-p~a~viv~-tNPv~~~~~~~~~~~~~  175 (354)
                      ++++||+||++.+.|.....      .-++..+...++.+.+.. ++.+|+.. |-|.+....+...++.+
T Consensus        73 ~~~~advvii~vpt~~~~~~------~~d~~~v~~~~~~i~~~l~~g~lvi~~STv~pgt~~~l~~~~~~~  137 (411)
T TIGR03026        73 AIRDADVIIICVPTPLKEDG------SPDLSYVESAAETIAKHLRKGATVVLESTVPPGTTEEVVKPILER  137 (411)
T ss_pred             HHhhCCEEEEEeCCCCCCCC------CcChHHHHHHHHHHHHhcCCCCEEEEeCcCCCCchHHHHHHHHHh
Confidence            89999999999877654321      112334444445555443 45555544 46666655544333333

All of these enzymes contain three Pfam domains, pfam03721, pfam00984, and pfam03720 for the N-terminal, central, and C-terminal regions respectively.

>PRK15057 UDP-glucose 6-dehydrogenase; Provisional

Probab=97.87  E-value=0.00015  Score=71.78  Aligned_cols=114  Identities=18%  Similarity=0.241  Sum_probs=67.1

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCC------------CCCeEEEEeCCCcHHhhhCC
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMD------------TGAVVRGFLGQPQLENALTG  110 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~------------~~~~v~~~~~~~d~~~al~~  110 (354)
                      |||+|||+ |.||..+|..++. |+  +|+.+|+++.+  +..+....            .....+. ..+.+..++.++
T Consensus         1 mkI~VIGl-GyvGl~~A~~lA~-G~--~VigvD~d~~k--v~~l~~g~~~~~e~~l~~~l~~~~~~l-~~t~~~~~~~~~   73 (388)
T PRK15057          1 MKITISGT-GYVGLSNGLLIAQ-NH--EVVALDILPSR--VAMLNDRISPIVDKEIQQFLQSDKIHF-NATLDKNEAYRD   73 (388)
T ss_pred             CEEEEECC-CHHHHHHHHHHHh-CC--cEEEEECCHHH--HHHHHcCCCCCCCcCHHHHHHhCCCcE-EEecchhhhhcC
Confidence            69999999 9999999977764 76  89999998621  11122110            0011121 123455678899


Q ss_pred             CcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEE-ecCCCCCchHH
Q 018512          111 MDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNL-ISNPVNSTVPI  168 (354)
Q Consensus       111 aDvVIi~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv-~tNPv~~~~~~  168 (354)
                      ||+||++.+.|.......     .++..+.+.++.+.+..++.+|++ .|-|.+..-.+
T Consensus        74 ad~vii~Vpt~~~~k~~~-----~dl~~v~~v~~~i~~~~~g~lVV~~STv~pgtt~~l  127 (388)
T PRK15057         74 ADYVIIATPTDYDPKTNY-----FNTSSVESVIKDVVEINPYAVMVIKSTVPVGFTAAM  127 (388)
T ss_pred             CCEEEEeCCCCCccCCCC-----cChHHHHHHHHHHHhcCCCCEEEEeeecCCchHHHH
Confidence            999999977663221111     122344444455544345555444 36777766544

>PLN02653 GDP-mannose 4,6-dehydratase

Probab=97.87  E-value=0.00012  Score=70.66  Aligned_cols=164  Identities=15%  Similarity=0.042  Sum_probs=91.6

Q ss_pred             CCCCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc---hhHHHHHhc-C-CCCCeEEEE----eCCCcHHhhh
Q 018512           38 GGAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT---PGVTADISH-M-DTGAVVRGF----LGQPQLENAL  108 (354)
Q Consensus        38 ~~~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~---~g~~~dl~~-~-~~~~~v~~~----~~~~d~~~al  108 (354)
                      |+.+.++|.|+||+|++|++++..|+..|.  +|+++|++..   ......+.. . .....+..+    ....++.+++
T Consensus         2 ~~~~~~~vlVTGatGfiG~~l~~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~   79 (340)
T PLN02653          2 GDPPRKVALITGITGQDGSYLTEFLLSKGY--EVHGIIRRSSNFNTQRLDHIYIDPHPNKARMKLHYGDLSDASSLRRWL   79 (340)
T ss_pred             CCCCCCEEEEECCCCccHHHHHHHHHHCCC--EEEEEecccccccccchhhhccccccccCceEEEEecCCCHHHHHHHH
Confidence            455668999999999999999999999887  8999987541   111111210 0 001112211    1112344556


Q ss_pred             CC--CcEEEEcCCCCCCCC--CCHHHHHHHHHHHHHHHHHHHhhhCCC----eEEEEec-CCCCCchHHHHHHHHHhCCC
Q 018512          109 TG--MDLVIIPAGVPRKPG--MTRDDLFNINAGIVRTLCEGIAKCCPN----ATVNLIS-NPVNSTVPIAAEVFKKAGTY  179 (354)
Q Consensus       109 ~~--aDvVIi~ag~~~~~g--~~r~d~~~~n~~~~~~i~~~i~~~~p~----a~viv~t-NPv~~~~~~~~~~~~~~~~~  179 (354)
                      ++  .|+||++|+......  ......+..|+....++++.+.++...    ..++.+| .-+.-...   ........+
T Consensus        80 ~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~v~~Ss~~vyg~~~---~~~~E~~~~  156 (340)
T PLN02653         80 DDIKPDEVYNLAAQSHVAVSFEMPDYTADVVATGALRLLEAVRLHGQETGRQIKYYQAGSSEMYGSTP---PPQSETTPF  156 (340)
T ss_pred             HHcCCCEEEECCcccchhhhhhChhHHHHHHHHHHHHHHHHHHHhccccccceeEEEeccHHHhCCCC---CCCCCCCCC
Confidence            54  599999998643211  122334567888999999999887743    2344443 11100000   000000112


Q ss_pred             CCCCEEEeccchHHHHHHHHHHHhCCC
Q 018512          180 DPKKLLGVTMLDVVRANTFVAEVLGLD  206 (354)
Q Consensus       180 p~~kviG~t~ld~~r~~~~la~~l~v~  206 (354)
                      .+...+|.+.....++...+++.+++.
T Consensus       157 ~p~~~Y~~sK~~~e~~~~~~~~~~~~~  183 (340)
T PLN02653        157 HPRSPYAVAKVAAHWYTVNYREAYGLF  183 (340)
T ss_pred             CCCChhHHHHHHHHHHHHHHHHHcCCe
Confidence            234556776655666666667777653

>TIGR01777 yfcH conserved hypothetical protein TIGR01777

Probab=97.87  E-value=0.00012  Score=68.54  Aligned_cols=100  Identities=21%  Similarity=0.252  Sum_probs=68.4

Q ss_pred             EEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcCCCCCCC
Q 018512           45 VAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVPRKP  124 (354)
Q Consensus        45 I~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~ag~~~~~  124 (354)
                      |.|+||+|++|++++..|+..+.  +|+.++++......  +..    ..+..... ....++++++|+||++++.+...
T Consensus         1 vlVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~--~~~----~~~~~~~~-~~~~~~~~~~D~Vvh~a~~~~~~   71 (292)
T TIGR01777         1 ILITGGTGFIGRALTQRLTKDGH--EVTILTRSPPAGAN--TKW----EGYKPWAP-LAESEALEGADAVINLAGEPIAD   71 (292)
T ss_pred             CEEEcccchhhHHHHHHHHHcCC--EEEEEeCCCCCCCc--ccc----eeeecccc-cchhhhcCCCCEEEECCCCCccc
Confidence            57999999999999999999887  99999987621100  000    00111111 23357789999999999865432


Q ss_pred             C-C---CHHHHHHHHHHHHHHHHHHHhhhCCCe
Q 018512          125 G-M---TRDDLFNINAGIVRTLCEGIAKCCPNA  153 (354)
Q Consensus       125 g-~---~r~d~~~~n~~~~~~i~~~i~~~~p~a  153 (354)
                      + .   ...++...|+...+++++.+++.....
T Consensus        72 ~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~  104 (292)
T TIGR01777        72 KRWTEERKQEIRDSRIDTTRALVEAIAAAEQKP  104 (292)
T ss_pred             ccCCHHHHHHHHhcccHHHHHHHHHHHhcCCCc
Confidence            2 1   224556779999999999999886533

This model represents a clade of proteins of unknown function including the E. coli yfcH protein.

>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]

Probab=97.87  E-value=0.00017  Score=67.69  Aligned_cols=166  Identities=15%  Similarity=0.126  Sum_probs=105.3

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC-c--hhHHHHHhcCCCCCeEEE-EeCCCcHHhhhC--CCcEEEE
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN-T--PGVTADISHMDTGAVVRG-FLGQPQLENALT--GMDLVII  116 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~-~--~g~~~dl~~~~~~~~v~~-~~~~~d~~~al~--~aDvVIi  116 (354)
                      |+|.|+||+||+|+++...++.+....+|+.+|.-. +  .....++.+......+++ +.....+.+.++  ..|.|++
T Consensus         1 ~~iLVTGGaGFIGsnfvr~~~~~~~d~~v~~~DkLTYAgn~~~l~~~~~~~~~~fv~~DI~D~~~v~~~~~~~~~D~Vvh   80 (340)
T COG1088           1 MKILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLTYAGNLENLADVEDSPRYRFVQGDICDRELVDRLFKEYQPDAVVH   80 (340)
T ss_pred             CcEEEecCcchHHHHHHHHHHhcCCCceEEEEecccccCCHHHHHhhhcCCCceEEeccccCHHHHHHHHHhcCCCeEEE
Confidence            689999999999999999888776656789999865 1  222334444322223333 211223345566  6999999


Q ss_pred             cCCCCCC--CCCCHHHHHHHHHHHHHHHHHHHhhhCCC-eEEEEecCCCCCchHHHHHHHHHhCCCCCCCEEEeccchHH
Q 018512          117 PAGVPRK--PGMTRDDLFNINAGIVRTLCEGIAKCCPN-ATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVV  193 (354)
Q Consensus       117 ~ag~~~~--~g~~r~d~~~~n~~~~~~i~~~i~~~~p~-a~viv~tNPv~~~~~~~~~~~~~~~~~p~~kviG~t~ld~~  193 (354)
                      .|+-..-  .=..-.+|++.|+-....+.+.++++... -++.+.|.-|.---..--..|-..+.+.|+-.+.-+.-.+.
T Consensus        81 fAAESHVDRSI~~P~~Fi~TNv~GT~~LLEaar~~~~~frf~HISTDEVYG~l~~~~~~FtE~tp~~PsSPYSASKAasD  160 (340)
T COG1088          81 FAAESHVDRSIDGPAPFIQTNVVGTYTLLEAARKYWGKFRFHHISTDEVYGDLGLDDDAFTETTPYNPSSPYSASKAASD  160 (340)
T ss_pred             echhccccccccChhhhhhcchHHHHHHHHHHHHhcccceEEEeccccccccccCCCCCcccCCCCCCCCCcchhhhhHH
Confidence            8753321  11124678999999999999999999864 45566665553110000001224456777777776655555


Q ss_pred             HHHHHHHHHhCCCCC
Q 018512          194 RANTFVAEVLGLDPR  208 (354)
Q Consensus       194 r~~~~la~~l~v~~~  208 (354)
                      .+-+...+-+|++..
T Consensus       161 ~lVray~~TYglp~~  175 (340)
T COG1088         161 LLVRAYVRTYGLPAT  175 (340)
T ss_pred             HHHHHHHHHcCCceE
Confidence            677788888888643

>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain

Probab=97.85  E-value=4.5e-05  Score=59.79  Aligned_cols=94  Identities=20%  Similarity=0.210  Sum_probs=59.5

Q ss_pred             eEEEEcCCCchHHHHHHHHHhCC-CCcEEEEE-ecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcCCCC
Q 018512           44 KVAILGAAGGIGQPLAMLMKINP-LVSVLHLY-DVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVP  121 (354)
Q Consensus        44 kI~IiGa~G~vG~~~a~~l~~~~-~~~ei~L~-D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~ag~~  121 (354)
                      ||+|||+ |++|++++..|+..+ ...+|.++ ++++.  ...++.... .  +..+  +.+..+++++||+||++.-. 
T Consensus         1 kI~iIG~-G~mg~al~~~l~~~g~~~~~v~~~~~r~~~--~~~~~~~~~-~--~~~~--~~~~~~~~~~advvilav~p-   71 (96)
T PF03807_consen    1 KIGIIGA-GNMGSALARGLLASGIKPHEVIIVSSRSPE--KAAELAKEY-G--VQAT--ADDNEEAAQEADVVILAVKP-   71 (96)
T ss_dssp             EEEEEST-SHHHHHHHHHHHHTTS-GGEEEEEEESSHH--HHHHHHHHC-T--TEEE--SEEHHHHHHHTSEEEE-S-G-
T ss_pred             CEEEECC-CHHHHHHHHHHHHCCCCceeEEeeccCcHH--HHHHHHHhh-c--cccc--cCChHHhhccCCEEEEEECH-
Confidence            7999999 999999999999888 23488866 87652  112222211 1  1211  22457889999999998421 


Q ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCC
Q 018512          122 RKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNP  161 (354)
Q Consensus       122 ~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNP  161 (354)
                                     ..+.++++.+....++..+|-++||
T Consensus        72 ---------------~~~~~v~~~i~~~~~~~~vis~~ag   96 (96)
T PF03807_consen   72 ---------------QQLPEVLSEIPHLLKGKLVISIAAG   96 (96)
T ss_dssp             ---------------GGHHHHHHHHHHHHTTSEEEEESTT
T ss_pred             ---------------HHHHHHHHHHhhccCCCEEEEeCCC
Confidence                           1344566666444577777766665

It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....

>COG2085 Predicted dinucleotide-binding enzymes [General function prediction only]

Probab=97.85  E-value=0.00016  Score=64.89  Aligned_cols=97  Identities=21%  Similarity=0.343  Sum_probs=63.9

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcCCCC
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVP  121 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~ag~~  121 (354)
                      +|+++|+|+ |++|++++..+...++  ||..-..+..+.........  .+.+..    ...++|.+.||+||.+.  |
T Consensus         1 m~~~~i~Gt-GniG~alA~~~a~ag~--eV~igs~r~~~~~~a~a~~l--~~~i~~----~~~~dA~~~aDVVvLAV--P   69 (211)
T COG2085           1 MMIIAIIGT-GNIGSALALRLAKAGH--EVIIGSSRGPKALAAAAAAL--GPLITG----GSNEDAAALADVVVLAV--P   69 (211)
T ss_pred             CcEEEEecc-ChHHHHHHHHHHhCCC--eEEEecCCChhHHHHHHHhh--cccccc----CChHHHHhcCCEEEEec--c
Confidence            578999998 9999999999999998  88888665522222211111  123333    23478999999999984  3


Q ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCC
Q 018512          122 RKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVN  163 (354)
Q Consensus       122 ~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv~  163 (354)
                                +.    .+..+.+.++..-.+-+||=.|||.+
T Consensus        70 ----------~~----a~~~v~~~l~~~~~~KIvID~tnp~~   97 (211)
T COG2085          70 ----------FE----AIPDVLAELRDALGGKIVIDATNPIE   97 (211)
T ss_pred             ----------HH----HHHhHHHHHHHHhCCeEEEecCCCcc
Confidence                      12    33344455554333677788899963

>KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis]

Probab=97.82  E-value=4e-05  Score=71.29  Aligned_cols=115  Identities=17%  Similarity=0.092  Sum_probs=73.4

Q ss_pred             CCCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcC
Q 018512           39 GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA  118 (354)
Q Consensus        39 ~~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~a  118 (354)
                      ++.++||+|+||+|||||+++..|+..++  +|...|.... +....++|....+..+... +.-...-+..+|.|++.|
T Consensus        24 p~~~lrI~itGgaGFIgSHLvdkLm~egh--~VIa~Dn~ft-g~k~n~~~~~~~~~fel~~-hdv~~pl~~evD~IyhLA   99 (350)
T KOG1429|consen   24 PSQNLRILITGGAGFIGSHLVDKLMTEGH--EVIALDNYFT-GRKENLEHWIGHPNFELIR-HDVVEPLLKEVDQIYHLA   99 (350)
T ss_pred             CCCCcEEEEecCcchHHHHHHHHHHhcCC--eEEEEecccc-cchhhcchhccCcceeEEE-eechhHHHHHhhhhhhhc
Confidence            55668999999999999999999999997  9999998652 2223344443333322211 222245689999999987


Q ss_pred             CCCCCCC--CCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 018512          119 GVPRKPG--MTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  159 (354)
Q Consensus       119 g~~~~~g--~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~t  159 (354)
                      ......+  ..-.+.+..|.-.........++.+  +.++.+|
T Consensus       100 apasp~~y~~npvktIktN~igtln~lglakrv~--aR~l~aS  140 (350)
T KOG1429|consen  100 APASPPHYKYNPVKTIKTNVIGTLNMLGLAKRVG--ARFLLAS  140 (350)
T ss_pred             cCCCCcccccCccceeeecchhhHHHHHHHHHhC--ceEEEee
Confidence            6433222  2233445666666666666666554  5555554

>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional

Probab=97.80  E-value=8.3e-05  Score=70.71  Aligned_cols=99  Identities=17%  Similarity=0.157  Sum_probs=65.3

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhC--CCcEEEEcCCC
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALT--GMDLVIIPAGV  120 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~--~aDvVIi~ag~  120 (354)
                      |||.|+||+|++|++++..|+..+   +|+.+|+.... ...|+.            ....+.++++  ++|+||++|+.
T Consensus         1 m~iLVtG~~GfiGs~l~~~L~~~g---~V~~~~~~~~~-~~~Dl~------------d~~~~~~~~~~~~~D~Vih~Aa~   64 (299)
T PRK09987          1 MNILLFGKTGQVGWELQRALAPLG---NLIALDVHSTD-YCGDFS------------NPEGVAETVRKIRPDVIVNAAAH   64 (299)
T ss_pred             CeEEEECCCCHHHHHHHHHhhccC---CEEEecccccc-ccCCCC------------CHHHHHHHHHhcCCCEEEECCcc
Confidence            689999999999999999998777   47778864310 000111            1123445565  58999999876


Q ss_pred             CCCC--CCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 018512          121 PRKP--GMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  159 (354)
Q Consensus       121 ~~~~--g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~t  159 (354)
                      ....  ..........|+....++++.+++.+.  .++.+|
T Consensus        65 ~~~~~~~~~~~~~~~~N~~~~~~l~~aa~~~g~--~~v~~S  103 (299)
T PRK09987         65 TAVDKAESEPEFAQLLNATSVEAIAKAANEVGA--WVVHYS  103 (299)
T ss_pred             CCcchhhcCHHHHHHHHHHHHHHHHHHHHHcCC--eEEEEc
Confidence            4321  112233456899999999999998753  444443

>PRK06522 2-dehydropantoate 2-reductase; Reviewed

Probab=97.77  E-value=0.00042  Score=65.71  Aligned_cols=102  Identities=21%  Similarity=0.215  Sum_probs=62.9

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCC---CCeEEE-EeCCCcHHhhhCCCcEEEEcC
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDT---GAVVRG-FLGQPQLENALTGMDLVIIPA  118 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~---~~~v~~-~~~~~d~~~al~~aDvVIi~a  118 (354)
                      |||+|+|+ |.+|+.++..|...|+  +|.++|++...-  ..+.....   ...... .....+..+ .+++|+||++.
T Consensus         1 m~I~IiG~-G~~G~~~a~~L~~~g~--~V~~~~r~~~~~--~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~d~vila~   74 (304)
T PRK06522          1 MKIAILGA-GAIGGLFGAALAQAGH--DVTLVARRGAHL--DALNENGLRLEDGEITVPVLAADDPAE-LGPQDLVILAV   74 (304)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCC--eEEEEECChHHH--HHHHHcCCcccCCceeecccCCCChhH-cCCCCEEEEec
Confidence            68999999 9999999999998887  899999864211  11111110   011110 111234444 49999999985


Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHHHHhhh-CCCeEEEEecCCCCCch
Q 018512          119 GVPRKPGMTRDDLFNINAGIVRTLCEGIAKC-CPNATVNLISNPVNSTV  166 (354)
Q Consensus       119 g~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~-~p~a~viv~tNPv~~~~  166 (354)
                      ...                .+.++++.+..+ .++..|+...|.++...
T Consensus        75 k~~----------------~~~~~~~~l~~~l~~~~~iv~~~nG~~~~~  107 (304)
T PRK06522         75 KAY----------------QLPAALPSLAPLLGPDTPVLFLQNGVGHLE  107 (304)
T ss_pred             ccc----------------cHHHHHHHHhhhcCCCCEEEEecCCCCcHH
Confidence            321                123444444443 35678888899887654

>PRK07201 short chain dehydrogenase; Provisional

Probab=97.74  E-value=0.00054  Score=72.04  Aligned_cols=115  Identities=14%  Similarity=0.104  Sum_probs=71.4

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCC----------CcHHhhhCCCc
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQ----------PQLENALTGMD  112 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~----------~d~~~al~~aD  112 (354)
                      |||.|+||+|++|++++..|+......+|++++++.......++........++.+...          .++ +.++++|
T Consensus         1 m~ILVTGatGfIG~~lv~~Ll~~~~g~~V~~l~R~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~-~~l~~~D   79 (657)
T PRK07201          1 MRYFVTGGTGFIGRRLVSRLLDRRREATVHVLVRRQSLSRLEALAAYWGADRVVPLVGDLTEPGLGLSEADI-AELGDID   79 (657)
T ss_pred             CeEEEeCCccHHHHHHHHHHHhcCCCCEEEEEECcchHHHHHHHHHhcCCCcEEEEecccCCccCCcCHHHH-HHhcCCC
Confidence            68999999999999999999852222389999986522222222110000112221110          122 2348999


Q ss_pred             EEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 018512          113 LVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  159 (354)
Q Consensus       113 vVIi~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~t  159 (354)
                      +||++|+.... .....+....|+....++++.+.+...+.+|.+.|
T Consensus        80 ~Vih~Aa~~~~-~~~~~~~~~~nv~gt~~ll~~a~~~~~~~~v~~SS  125 (657)
T PRK07201         80 HVVHLAAIYDL-TADEEAQRAANVDGTRNVVELAERLQAATFHHVSS  125 (657)
T ss_pred             EEEECceeecC-CCCHHHHHHHHhHHHHHHHHHHHhcCCCeEEEEec
Confidence            99999885432 23345567889999999999998875555554443

>PRK00094 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Validated

Probab=97.73  E-value=0.00025  Score=67.94  Aligned_cols=100  Identities=22%  Similarity=0.342  Sum_probs=63.6

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCch--hHHHHHhcCC------CCCeEEEEeCCCcHHhhhCCCcE
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP--GVTADISHMD------TGAVVRGFLGQPQLENALTGMDL  113 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~--g~~~dl~~~~------~~~~v~~~~~~~d~~~al~~aDv  113 (354)
                      +|||+|||+ |.+|+.++..|...++  +|.++|+++..  ....+..+..      ....+..   +.+..++++++|+
T Consensus         1 mmkI~iiG~-G~mG~~~a~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~D~   74 (325)
T PRK00094          1 MMKIAVLGA-GSWGTALAIVLARNGH--DVTLWARDPEQAAEINADRENPRYLPGIKLPDNLRA---TTDLAEALADADL   74 (325)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCC--EEEEEECCHHHHHHHHHcCcccccCCCCcCCCCeEE---eCCHHHHHhCCCE
Confidence            479999999 9999999999999888  89999997521  1111100100      0011222   2456678899999


Q ss_pred             EEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecCCCC
Q 018512          114 VIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVN  163 (354)
Q Consensus       114 VIi~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~-p~a~viv~tNPv~  163 (354)
                      ||++...                ..+.++++.+..+. ++.+++..+|-++
T Consensus        75 vi~~v~~----------------~~~~~v~~~l~~~~~~~~~vi~~~ngv~  109 (325)
T PRK00094         75 ILVAVPS----------------QALREVLKQLKPLLPPDAPIVWATKGIE  109 (325)
T ss_pred             EEEeCCH----------------HHHHHHHHHHHhhcCCCCEEEEEeeccc
Confidence            9998421                12344445555553 5777777776554

>PRK12921 2-dehydropantoate 2-reductase; Provisional

Probab=97.71  E-value=0.00067  Score=64.44  Aligned_cols=119  Identities=12%  Similarity=0.136  Sum_probs=71.3

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCC-----CCeEEE-EeCCCcHHhhhCCCcEEEE
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDT-----GAVVRG-FLGQPQLENALTGMDLVII  116 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~-----~~~v~~-~~~~~d~~~al~~aDvVIi  116 (354)
                      |||+|+|+ |.+|..++..|...|+  +|.++++ +..  ...+.+...     ...... ....++..++.+++|+||+
T Consensus         1 mkI~IiG~-G~iG~~~a~~L~~~g~--~V~~~~r-~~~--~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vil   74 (305)
T PRK12921          1 MRIAVVGA-GAVGGTFGGRLLEAGR--DVTFLVR-PKR--AKALRERGLVIRSDHGDAVVPGPVITDPEELTGPFDLVIL   74 (305)
T ss_pred             CeEEEECC-CHHHHHHHHHHHHCCC--ceEEEec-HHH--HHHHHhCCeEEEeCCCeEEecceeecCHHHccCCCCEEEE
Confidence            69999999 9999999999999887  8999998 411  111221110     001100 0012344555689999999


Q ss_pred             cCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhh-CCCeEEEEecCCCCCchHHHHHHHHHhCCCCCCCEEE-eccc
Q 018512          117 PAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKC-CPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLG-VTML  190 (354)
Q Consensus       117 ~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~-~p~a~viv~tNPv~~~~~~~~~~~~~~~~~p~~kviG-~t~l  190 (354)
                      +....                .+.++++.+..+ .++..|+...|.++....     +.+.  +|..++++ ++..
T Consensus        75 avk~~----------------~~~~~~~~l~~~~~~~~~ii~~~nG~~~~~~-----l~~~--~~~~~v~~g~~~~  127 (305)
T PRK12921         75 AVKAY----------------QLDAAIPDLKPLVGEDTVIIPLQNGIGQLEQ-----LEPY--FGRERVLGGVVFI  127 (305)
T ss_pred             Eeccc----------------CHHHHHHHHHhhcCCCCEEEEeeCCCChHHH-----HHHh--CCcccEEEEEEEE
Confidence            85322                123444455543 356777778898875432     2332  56667764 4443

>PLN02253 xanthoxin dehydrogenase

Probab=97.71  E-value=0.00078  Score=62.94  Aligned_cols=147  Identities=17%  Similarity=0.197  Sum_probs=82.2

Q ss_pred             CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc--hhHHHHHhcCCCCCeEEEE----eCCCcHHhhhC-----
Q 018512           41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGF----LGQPQLENALT-----  109 (354)
Q Consensus        41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~--~g~~~dl~~~~~~~~v~~~----~~~~d~~~al~-----  109 (354)
                      ..+++.|+||+|.+|.+++..|+..|.  +|+++|++..  .....++..   ...+..+    ....+.+++++     
T Consensus        17 ~~k~~lItGas~gIG~~la~~l~~~G~--~v~~~~~~~~~~~~~~~~~~~---~~~~~~~~~Dl~d~~~~~~~~~~~~~~   91 (280)
T PLN02253         17 LGKVALVTGGATGIGESIVRLFHKHGA--KVCIVDLQDDLGQNVCDSLGG---EPNVCFFHCDVTVEDDVSRAVDFTVDK   91 (280)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHHhcC---CCceEEEEeecCCHHHHHHHHHHHHHH
Confidence            345899999999999999999999887  8999998652  222222321   1112211    11112233333     


Q ss_pred             --CCcEEEEcCCCCCCC-C----CCH---HHHHHHHHHHHHHHHHHHhhh---CCCeEEEEecCCCCCchHHHHHHHHHh
Q 018512          110 --GMDLVIIPAGVPRKP-G----MTR---DDLFNINAGIVRTLCEGIAKC---CPNATVNLISNPVNSTVPIAAEVFKKA  176 (354)
Q Consensus       110 --~aDvVIi~ag~~~~~-g----~~r---~d~~~~n~~~~~~i~~~i~~~---~p~a~viv~tNPv~~~~~~~~~~~~~~  176 (354)
                        ..|+||+.||..... +    .+.   ...+..|+.....+.+.+.+.   ...+.+++++......           
T Consensus        92 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~ii~isS~~~~~-----------  160 (280)
T PLN02253         92 FGTLDIMVNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGVFLGMKHAARIMIPLKKGSIVSLCSVASAI-----------  160 (280)
T ss_pred             hCCCCEEEECCCcCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCceEEEecChhhcc-----------
Confidence              689999999864321 1    122   234566655554444443322   1345666665422111           


Q ss_pred             CCCCCCCEEEeccchHHHHHHHHHHHhC
Q 018512          177 GTYDPKKLLGVTMLDVVRANTFVAEVLG  204 (354)
Q Consensus       177 ~~~p~~kviG~t~ld~~r~~~~la~~l~  204 (354)
                       +.+..-.+|.+......+.+.++..++
T Consensus       161 -~~~~~~~Y~~sK~a~~~~~~~la~e~~  187 (280)
T PLN02253        161 -GGLGPHAYTGSKHAVLGLTRSVAAELG  187 (280)
T ss_pred             -cCCCCcccHHHHHHHHHHHHHHHHHhh
Confidence             222233566665555567777887775

>PRK14619 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional

Probab=97.69  E-value=0.00027  Score=67.68  Aligned_cols=79  Identities=23%  Similarity=0.300  Sum_probs=59.4

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcCCCC
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVP  121 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~ag~~  121 (354)
                      .|||+|||+ |.+|++++..|...|+  +|.++|+++.                      .++.+++++||+||++... 
T Consensus         4 ~m~I~iiG~-G~~G~~lA~~l~~~G~--~V~~~~r~~~----------------------~~~~~~~~~advvi~~vp~-   57 (308)
T PRK14619          4 PKTIAILGA-GAWGSTLAGLASANGH--RVRVWSRRSG----------------------LSLAAVLADADVIVSAVSM-   57 (308)
T ss_pred             CCEEEEECc-cHHHHHHHHHHHHCCC--EEEEEeCCCC----------------------CCHHHHHhcCCEEEEECCh-
Confidence            579999999 9999999999999998  9999998641                      2356778999999998420 


Q ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHHhhh--CCCeEEEEecCC
Q 018512          122 RKPGMTRDDLFNINAGIVRTLCEGIAKC--CPNATVNLISNP  161 (354)
Q Consensus       122 ~~~g~~r~d~~~~n~~~~~~i~~~i~~~--~p~a~viv~tNP  161 (354)
                                     ..++++++.+..+  .++.+|+..|+.
T Consensus        58 ---------------~~~~~v~~~l~~~~~~~~~ivi~~s~g   84 (308)
T PRK14619         58 ---------------KGVRPVAEQVQALNLPPETIIVTATKG   84 (308)
T ss_pred             ---------------HHHHHHHHHHHHhcCCCCcEEEEeCCc
Confidence                           2344555666543  467777777763

>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional

Probab=97.68  E-value=0.00042  Score=65.79  Aligned_cols=160  Identities=9%  Similarity=0.117  Sum_probs=86.7

Q ss_pred             EEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCc-HHhhh-----CCCcEEEEcC
Q 018512           45 VAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQ-LENAL-----TGMDLVIIPA  118 (354)
Q Consensus        45 I~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d-~~~al-----~~aDvVIi~a  118 (354)
                      |.|+||+|++|++++..|+..|. ..+.++|..........+.+..    +.......+ +++++     .++|+||++|
T Consensus         2 ilVtGa~GfiG~~l~~~L~~~g~-~~v~~~~~~~~~~~~~~~~~~~----~~d~~~~~~~~~~~~~~~~~~~~d~Vih~A   76 (308)
T PRK11150          2 IIVTGGAGFIGSNIVKALNDKGI-TDILVVDNLKDGTKFVNLVDLD----IADYMDKEDFLAQIMAGDDFGDIEAIFHEG   76 (308)
T ss_pred             EEEecCCcHHHHHHHHHHHhCCC-ceEEEecCCCcchHHHhhhhhh----hhhhhhHHHHHHHHhcccccCCccEEEECc
Confidence            78999999999999999998885 2467778754211101111111    000000011 12222     3799999998


Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCC------CCCchHHHHHHHHHhCCCCCCCEEEeccchH
Q 018512          119 GVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNP------VNSTVPIAAEVFKKAGTYDPKKLLGVTMLDV  192 (354)
Q Consensus       119 g~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNP------v~~~~~~~~~~~~~~~~~p~~kviG~t~ld~  192 (354)
                      +.+.............|+....++.+.+++.+.  .+|..|..      .+...       .......+...+|.+....
T Consensus        77 ~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~--~~i~~SS~~vyg~~~~~~~-------~E~~~~~p~~~Y~~sK~~~  147 (308)
T PRK11150         77 ACSSTTEWDGKYMMDNNYQYSKELLHYCLEREI--PFLYASSAATYGGRTDDFI-------EEREYEKPLNVYGYSKFLF  147 (308)
T ss_pred             eecCCcCCChHHHHHHHHHHHHHHHHHHHHcCC--cEEEEcchHHhCcCCCCCC-------ccCCCCCCCCHHHHHHHHH
Confidence            754332333445678899999999999988754  34444321      11000       0101112223455554444


Q ss_pred             HHHHHHHHHHhCCCCCCCc-ceEEeec
Q 018512          193 VRANTFVAEVLGLDPRDVD-VPVVGGH  218 (354)
Q Consensus       193 ~r~~~~la~~l~v~~~~v~-~~v~G~h  218 (354)
                      .++...+++..+++...++ ..++|..
T Consensus       148 E~~~~~~~~~~~~~~~~lR~~~vyG~~  174 (308)
T PRK11150        148 DEYVRQILPEANSQICGFRYFNVYGPR  174 (308)
T ss_pred             HHHHHHHHHHcCCCEEEEeeeeecCCC
Confidence            4444444444565544444 5677754

>PLN02240 UDP-glucose 4-epimerase

Probab=97.67  E-value=0.00059  Score=65.88  Aligned_cols=113  Identities=19%  Similarity=0.151  Sum_probs=70.7

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc--hhHHHHHhcCC--CCCeEEEE----eCCCcHHhhhC--CC
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMD--TGAVVRGF----LGQPQLENALT--GM  111 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~--~g~~~dl~~~~--~~~~v~~~----~~~~d~~~al~--~a  111 (354)
                      .+||+|+||+|++|++++..|+..+.  +|+++|+...  ......+.+..  ....++.+    ....++.++++  ++
T Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~--~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~~~   82 (352)
T PLN02240          5 GRTILVTGGAGYIGSHTVLQLLLAGY--KVVVIDNLDNSSEEALRRVKELAGDLGDNLVFHKVDLRDKEALEKVFASTRF   82 (352)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCC--EEEEEeCCCcchHHHHHHHHHhhcccCccceEEecCcCCHHHHHHHHHhCCC
Confidence            36899999999999999999998887  8999986431  11111111110  01112211    11123334444  68


Q ss_pred             cEEEEcCCCCCCC-C-CCHHHHHHHHHHHHHHHHHHHhhhCCCeEEE
Q 018512          112 DLVIIPAGVPRKP-G-MTRDDLFNINAGIVRTLCEGIAKCCPNATVN  156 (354)
Q Consensus       112 DvVIi~ag~~~~~-g-~~r~d~~~~n~~~~~~i~~~i~~~~p~a~vi  156 (354)
                      |+||++|+..... . ....+.+..|+.....+++.+++...+.+|.
T Consensus        83 d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~  129 (352)
T PLN02240         83 DAVIHFAGLKAVGESVAKPLLYYDNNLVGTINLLEVMAKHGCKKLVF  129 (352)
T ss_pred             CEEEEccccCCccccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEE
Confidence            9999998864221 1 2345677899999999999988765444443

>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional

Probab=97.66  E-value=0.00077  Score=61.99  Aligned_cols=114  Identities=16%  Similarity=0.239  Sum_probs=67.8

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCCCCeEEEEe-CCCc---HHhhh-------
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQ---LENAL-------  108 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~~~~v~~~~-~~~d---~~~al-------  108 (354)
                      .+++.|+||+|.+|++++..|+..|.  +|+++++++  ......++.+..  ..+..+. +-+|   +++++       
T Consensus         7 ~~~vlItGasg~iG~~la~~l~~~G~--~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~~~~   82 (262)
T PRK13394          7 GKTAVVTGAASGIGKEIALELARAGA--AVAIADLNQDGANAVADEINKAG--GKAIGVAMDVTNEDAVNAGIDKVAERF   82 (262)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCC--eEEEEeCChHHHHHHHHHHHhcC--ceEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            45899999999999999999999988  899999876  222333343322  2222211 1122   22222       


Q ss_pred             CCCcEEEEcCCCCCCC---C---CCHHHHHHHHHHH----HHHHHHHHhhhCCCeEEEEec
Q 018512          109 TGMDLVIIPAGVPRKP---G---MTRDDLFNINAGI----VRTLCEGIAKCCPNATVNLIS  159 (354)
Q Consensus       109 ~~aDvVIi~ag~~~~~---g---~~r~d~~~~n~~~----~~~i~~~i~~~~p~a~viv~t  159 (354)
                      ...|+||+++|.....   .   ....+.+..|+..    .+.+.+.+.+..+.+.|+++|
T Consensus        83 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~~~iv~~s  143 (262)
T PRK13394         83 GSVDILVSNAGIQIVNPIENYSFADWKKMQAIHVDGAFLTTKAALKHMYKDDRGGVVIYMG  143 (262)
T ss_pred             CCCCEEEECCccCCCCchhhCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhhcCCcEEEEEc
Confidence            3489999999864211   1   1123344566665    666666663334445555554

>KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism]

Probab=97.65  E-value=0.00031  Score=68.34  Aligned_cols=114  Identities=20%  Similarity=0.233  Sum_probs=76.1

Q ss_pred             CCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc-hhHHHHHhcCCCCCeEEEE----eCCCcHHhhhCCCcEE
Q 018512           40 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT-PGVTADISHMDTGAVVRGF----LGQPQLENALTGMDLV  114 (354)
Q Consensus        40 ~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~-~g~~~dl~~~~~~~~v~~~----~~~~d~~~al~~aDvV  114 (354)
                      .++.++.|+||+|++|.+++..|..++...+|.++|.... ...-.+..... ...++..    .+..+...|++++ .|
T Consensus         2 ~~~~~vlVtGG~GflG~hlv~~L~~~~~~~~irv~D~~~~~~~~~~e~~~~~-~~~v~~~~~D~~~~~~i~~a~~~~-~V   79 (361)
T KOG1430|consen    2 EKKLSVLVTGGSGFLGQHLVQALLENELKLEIRVVDKTPTQSNLPAELTGFR-SGRVTVILGDLLDANSISNAFQGA-VV   79 (361)
T ss_pred             CcCCEEEEECCccHHHHHHHHHHHhcccccEEEEeccCccccccchhhhccc-CCceeEEecchhhhhhhhhhccCc-eE
Confidence            3456899999999999999999999986669999999762 11111222111 1222221    1224567899999 77


Q ss_pred             EEcCCCC-CCCCC-CHHHHHHHHHHHHHHHHHHHhhhCCCeEE
Q 018512          115 IIPAGVP-RKPGM-TRDDLFNINAGIVRTLCEGIAKCCPNATV  155 (354)
Q Consensus       115 Ii~ag~~-~~~g~-~r~d~~~~n~~~~~~i~~~i~~~~p~a~v  155 (354)
                      +++|..+ ..... .+.....-|+...+++.+.+.+.+-+..|
T Consensus        80 vh~aa~~~~~~~~~~~~~~~~vNV~gT~nvi~~c~~~~v~~lI  122 (361)
T KOG1430|consen   80 VHCAASPVPDFVENDRDLAMRVNVNGTLNVIEACKELGVKRLI  122 (361)
T ss_pred             EEeccccCccccccchhhheeecchhHHHHHHHHHHhCCCEEE
Confidence            7755433 22223 35666678999999999999998766533

>PTZ00345 glycerol-3-phosphate dehydrogenase; Provisional

Probab=97.65  E-value=0.00044  Score=67.78  Aligned_cols=106  Identities=15%  Similarity=0.297  Sum_probs=68.5

Q ss_pred             hhhhhhcccCCCCCCCeEEEEcCCCchHHHHHHHHHhCCC-----CcEEEEEecCCc---hhHHHHHhcC--C--C----
Q 018512           28 CLRQAKCRAKGGAAGFKVAILGAAGGIGQPLAMLMKINPL-----VSVLHLYDVVNT---PGVTADISHM--D--T----   91 (354)
Q Consensus        28 ~~~~~~~~~~~~~~~~kI~IiGa~G~vG~~~a~~l~~~~~-----~~ei~L~D~~~~---~g~~~dl~~~--~--~----   91 (354)
                      +|.++.++.      +||+|||+ |.-|+++|..|..++.     ..+|.|+.+++.   +..+.++++.  .  .    
T Consensus         3 ~~~~~~~~~------~ki~ViGa-G~wGtAlA~~l~~n~~~~~~~~~~V~lw~~~~~~~~~~~~~~in~~~~N~~ylp~~   75 (365)
T PTZ00345          3 LFQKLRCGP------LKVSVIGS-GNWGSAISKVVGENTQRNYIFHNEVRMWVLEEIVEGEKLSDIINTKHENVKYLPGI   75 (365)
T ss_pred             chhhcccCC------CeEEEECC-CHHHHHHHHHHHhcCCcccCCCCeEEEEEecccccchHHHHHHHhcCCCcccCCCC
Confidence            455555444      59999999 9999999999998762     238899988762   1234444422  1  1    


Q ss_pred             --CCeEEEEeCCCcHHhhhCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhh--hC-CCeEEEEec
Q 018512           92 --GAVVRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAK--CC-PNATVNLIS  159 (354)
Q Consensus        92 --~~~v~~~~~~~d~~~al~~aDvVIi~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~--~~-p~a~viv~t  159 (354)
                        ...+..   ++|+.+++++||+||++.  |              ...+++++++++.  +- ++.++|.++
T Consensus        76 ~Lp~ni~~---tsdl~eav~~aDiIvlAV--P--------------sq~l~~vl~~l~~~~~l~~~~~iIS~a  129 (365)
T PTZ00345         76 KLPDNIVA---VSDLKEAVEDADLLIFVI--P--------------HQFLESVLSQIKENNNLKKHARAISLT  129 (365)
T ss_pred             cCCCceEE---ecCHHHHHhcCCEEEEEc--C--------------hHHHHHHHHHhccccccCCCCEEEEEe
Confidence              122333   457788999999999973  2              1356677777775  33 344555554

>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase

Probab=97.65  E-value=0.0003  Score=65.92  Aligned_cols=89  Identities=22%  Similarity=0.312  Sum_probs=64.7

Q ss_pred             eEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCC--cEEEEcCCCC
Q 018512           44 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGM--DLVIIPAGVP  121 (354)
Q Consensus        44 kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~a--DvVIi~ag~~  121 (354)
                      ||.|+||+|++|++++..|+..|.  +|+++++..     .|+.+            ..++.++++++  |+||++++..
T Consensus         1 kilv~G~tG~iG~~l~~~l~~~g~--~v~~~~r~~-----~d~~~------------~~~~~~~~~~~~~d~vi~~a~~~   61 (287)
T TIGR01214         1 RILITGANGQLGRELVQQLSPEGR--VVVALTSSQ-----LDLTD------------PEALERLLRAIRPDAVVNTAAYT   61 (287)
T ss_pred             CEEEEcCCCHHHHHHHHHHHhcCC--EEEEeCCcc-----cCCCC------------HHHHHHHHHhCCCCEEEECCccc
Confidence            689999999999999999998887  899988741     11211            12345667665  9999998864


Q ss_pred             CCCC--CCHHHHHHHHHHHHHHHHHHHhhhCC
Q 018512          122 RKPG--MTRDDLFNINAGIVRTLCEGIAKCCP  151 (354)
Q Consensus       122 ~~~g--~~r~d~~~~n~~~~~~i~~~i~~~~p  151 (354)
                      ....  .........|+....++++.+.+...
T Consensus        62 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~   93 (287)
T TIGR01214        62 DVDGAESDPEKAFAVNALAPQNLARAAARHGA   93 (287)
T ss_pred             cccccccCHHHHHHHHHHHHHHHHHHHHHcCC
Confidence            3221  23445677899999999999887653

This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.

>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase

Probab=97.64  E-value=0.00062  Score=67.41  Aligned_cols=114  Identities=18%  Similarity=0.133  Sum_probs=70.5

Q ss_pred             CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCch--h--HHHHHhcCCCCCe-EEE-EeCCCcHHhhhC----C
Q 018512           41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP--G--VTADISHMDTGAV-VRG-FLGQPQLENALT----G  110 (354)
Q Consensus        41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~--g--~~~dl~~~~~~~~-v~~-~~~~~d~~~al~----~  110 (354)
                      ..+||.|+||+|++|+.++..|+.+|.  +|++++++...  .  ...++........ +.. .....++.++++    +
T Consensus        59 ~~~kVLVtGatG~IG~~l~~~Ll~~G~--~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~~~~~~~~~~  136 (390)
T PLN02657         59 KDVTVLVVGATGYIGKFVVRELVRRGY--NVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTDADSLRKVLFSEGDP  136 (390)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC--EEEEEEechhhccccchhhHHhhhcCCceEEEeeCCCHHHHHHHHHHhCCC
Confidence            357999999999999999999999887  89999986521  0  1111111110111 111 111233455666    5


Q ss_pred             CcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 018512          111 MDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  159 (354)
Q Consensus       111 aDvVIi~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~t  159 (354)
                      +|+||++++.+...   ..+.+..|.....++++.+++.+.+-+|++.|
T Consensus       137 ~D~Vi~~aa~~~~~---~~~~~~vn~~~~~~ll~aa~~~gv~r~V~iSS  182 (390)
T PLN02657        137 VDVVVSCLASRTGG---VKDSWKIDYQATKNSLDAGREVGAKHFVLLSA  182 (390)
T ss_pred             CcEEEECCccCCCC---CccchhhHHHHHHHHHHHHHHcCCCEEEEEee
Confidence            99999987643211   12335667888888999888776554544443

>PRK08229 2-dehydropantoate 2-reductase; Provisional

Probab=97.64  E-value=0.00052  Score=66.39  Aligned_cols=101  Identities=21%  Similarity=0.216  Sum_probs=62.6

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCC------CCeE----EEEeCCCcHHhhhCCC
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDT------GAVV----RGFLGQPQLENALTGM  111 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~------~~~v----~~~~~~~d~~~al~~a  111 (354)
                      +|||+|||+ |.+|+.++..|...|+  +|.++|+++..   ..+.....      ....    ..+..+++. ++++++
T Consensus         2 ~mkI~IiG~-G~mG~~~A~~L~~~G~--~V~~~~r~~~~---~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~   74 (341)
T PRK08229          2 MARICVLGA-GSIGCYLGGRLAAAGA--DVTLIGRARIG---DELRAHGLTLTDYRGRDVRVPPSAIAFSTDP-AALATA   74 (341)
T ss_pred             CceEEEECC-CHHHHHHHHHHHhcCC--cEEEEecHHHH---HHHHhcCceeecCCCcceecccceeEeccCh-hhccCC
Confidence            479999999 9999999999999987  89999985411   11111110      0000    001113454 678999


Q ss_pred             cEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhh-CCCeEEEEecCCCCCc
Q 018512          112 DLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKC-CPNATVNLISNPVNST  165 (354)
Q Consensus       112 DvVIi~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~-~p~a~viv~tNPv~~~  165 (354)
                      |+||++...+.                ..++++.+... .++.+|+..+|..+..
T Consensus        75 D~vil~vk~~~----------------~~~~~~~l~~~~~~~~iii~~~nG~~~~  113 (341)
T PRK08229         75 DLVLVTVKSAA----------------TADAAAALAGHARPGAVVVSFQNGVRNA  113 (341)
T ss_pred             CEEEEEecCcc----------------hHHHHHHHHhhCCCCCEEEEeCCCCCcH
Confidence            99999853221                12333444444 3567777778877654

>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1

Probab=97.64  E-value=0.00035  Score=60.55  Aligned_cols=64  Identities=17%  Similarity=0.247  Sum_probs=46.4

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEc
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIP  117 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~  117 (354)
                      ++||.+||. |.+|+.++..|+..++  +|+.||+++  ....++.+..    .+..   .++.+++++||+||.+
T Consensus         1 m~~Ig~IGl-G~mG~~~a~~L~~~g~--~v~~~d~~~--~~~~~~~~~g----~~~~---~s~~e~~~~~dvvi~~   64 (163)
T PF03446_consen    1 MMKIGFIGL-GNMGSAMARNLAKAGY--EVTVYDRSP--EKAEALAEAG----AEVA---DSPAEAAEQADVVILC   64 (163)
T ss_dssp             -BEEEEE---SHHHHHHHHHHHHTTT--EEEEEESSH--HHHHHHHHTT----EEEE---SSHHHHHHHBSEEEE-
T ss_pred             CCEEEEEch-HHHHHHHHHHHHhcCC--eEEeeccch--hhhhhhHHhh----hhhh---hhhhhHhhcccceEee
Confidence            479999999 9999999999999998  999999865  2223344332    3322   3568899999999997

1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....

>PRK05865 hypothetical protein; Provisional

Probab=97.62  E-value=0.00043  Score=74.57  Aligned_cols=104  Identities=17%  Similarity=0.164  Sum_probs=71.8

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEE-EeCCCcHHhhhCCCcEEEEcCCCC
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRG-FLGQPQLENALTGMDLVIIPAGVP  121 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~-~~~~~d~~~al~~aDvVIi~ag~~  121 (354)
                      |||.|+||+|++|++++..|+..|+  +|+++|++....    +. .. ...+.. +....++.++++++|+||++|+..
T Consensus         1 MkILVTGATGfIGs~La~~Ll~~G~--~Vv~l~R~~~~~----~~-~~-v~~v~gDL~D~~~l~~al~~vD~VVHlAa~~   72 (854)
T PRK05865          1 MRIAVTGASGVLGRGLTARLLSQGH--EVVGIARHRPDS----WP-SS-ADFIAADIRDATAVESAMTGADVVAHCAWVR   72 (854)
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcC--EEEEEECCchhh----cc-cC-ceEEEeeCCCHHHHHHHHhCCCEEEECCCcc
Confidence            6899999999999999999999888  899999864210    11 01 011221 112234567789999999998653


Q ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCC
Q 018512          122 RKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPV  162 (354)
Q Consensus       122 ~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv  162 (354)
                      ..       ....|+....++++.+++.+.. .++++|.+.
T Consensus        73 ~~-------~~~vNv~GT~nLLeAa~~~gvk-r~V~iSS~~  105 (854)
T PRK05865         73 GR-------NDHINIDGTANVLKAMAETGTG-RIVFTSSGH  105 (854)
T ss_pred             cc-------hHHHHHHHHHHHHHHHHHcCCC-eEEEECCcH
Confidence            21       3467888999999999877644 455566553

>PRK08643 acetoin reductase; Validated

Probab=97.61  E-value=0.0029  Score=58.17  Aligned_cols=114  Identities=20%  Similarity=0.262  Sum_probs=65.2

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc--hhHHHHHhcCCCCCeEEEEe-CCCc---HHhh-------hC
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFL-GQPQ---LENA-------LT  109 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~--~g~~~dl~~~~~~~~v~~~~-~~~d---~~~a-------l~  109 (354)
                      +++.|+||+|.+|..++..|+..|.  +|+++|++..  .....++.+..  ..+..+. +-++   +.++       +.
T Consensus         3 k~~lItGas~giG~~la~~l~~~G~--~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   78 (256)
T PRK08643          3 KVALVTGAGQGIGFAIAKRLVEDGF--KVAIVDYNEETAQAAADKLSKDG--GKAIAVKADVSDRDQVFAAVRQVVDTFG   78 (256)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcC--CeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            4789999999999999999999887  8999998752  22223343321  1111111 1112   1222       24


Q ss_pred             CCcEEEEcCCCCCC-C--CCCH---HHHHHHHHHHH----HHHHHHHhhhCCCeEEEEecC
Q 018512          110 GMDLVIIPAGVPRK-P--GMTR---DDLFNINAGIV----RTLCEGIAKCCPNATVNLISN  160 (354)
Q Consensus       110 ~aDvVIi~ag~~~~-~--g~~r---~d~~~~n~~~~----~~i~~~i~~~~p~a~viv~tN  160 (354)
                      +.|+||+++|.... +  ..+.   ...+..|+...    +.+.+.+++..+++.|+++|.
T Consensus        79 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS  139 (256)
T PRK08643         79 DLNVVVNNAGVAPTTPIETITEEQFDKVYNINVGGVIWGIQAAQEAFKKLGHGGKIINATS  139 (256)
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECc
Confidence            68999999986422 1  1111   22345565543    344444444444566776664

>PLN02686 cinnamoyl-CoA reductase

Probab=97.61  E-value=0.00037  Score=68.39  Aligned_cols=178  Identities=14%  Similarity=0.076  Sum_probs=96.9

Q ss_pred             CCCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCch-hHHHHHhcC---C-CCCeEEEE----eCCCcHHhhhC
Q 018512           39 GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP-GVTADISHM---D-TGAVVRGF----LGQPQLENALT  109 (354)
Q Consensus        39 ~~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~-g~~~dl~~~---~-~~~~v~~~----~~~~d~~~al~  109 (354)
                      ...+++|+|+||+|++|++++..|+..|+  +|+++..+... ....++...   . ....+..+    ....++.++++
T Consensus        50 ~~~~k~VLVTGatGfIG~~lv~~L~~~G~--~V~~~~r~~~~~~~l~~l~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~i~  127 (367)
T PLN02686         50 DAEARLVCVTGGVSFLGLAIVDRLLRHGY--SVRIAVDTQEDKEKLREMEMFGEMGRSNDGIWTVMANLTEPESLHEAFD  127 (367)
T ss_pred             CCCCCEEEEECCchHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHhhhccccccCCceEEEEcCCCCHHHHHHHHH
Confidence            45567999999999999999999999987  88776554311 111122110   0 00112221    11223567789


Q ss_pred             CCcEEEEcCCCCCCCCC--CHHHHHHHHHHHHHHHHHHHhhh-CCCeEEEEecC--CCCCc------hHHHHHHHH--Hh
Q 018512          110 GMDLVIIPAGVPRKPGM--TRDDLFNINAGIVRTLCEGIAKC-CPNATVNLISN--PVNST------VPIAAEVFK--KA  176 (354)
Q Consensus       110 ~aDvVIi~ag~~~~~g~--~r~d~~~~n~~~~~~i~~~i~~~-~p~a~viv~tN--Pv~~~------~~~~~~~~~--~~  176 (354)
                      ++|.||++++.....+.  ...++...|+....++++.+++. +.+-+|+..|.  .+...      .....+-.+  ..
T Consensus       128 ~~d~V~hlA~~~~~~~~~~~~~~~~~~nv~gt~~llea~~~~~~v~r~V~~SS~~~~vyg~~~~~~~~~~i~E~~~~~~~  207 (367)
T PLN02686        128 GCAGVFHTSAFVDPAGLSGYTKSMAELEAKASENVIEACVRTESVRKCVFTSSLLACVWRQNYPHDLPPVIDEESWSDES  207 (367)
T ss_pred             hccEEEecCeeecccccccccchhhhhhHHHHHHHHHHHHhcCCccEEEEeccHHHhcccccCCCCCCcccCCCCCCChh
Confidence            99999998875432221  12344567899999999998875 34444444442  11000      000000000  00


Q ss_pred             CCCCCCCEEEeccchHHHHHHHHHHHhCCCCCCCc-ceEEeec
Q 018512          177 GTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVD-VPVVGGH  218 (354)
Q Consensus       177 ~~~p~~kviG~t~ld~~r~~~~la~~l~v~~~~v~-~~v~G~h  218 (354)
                      .-.++.-.+|.+.+...++-..+++..|++..-++ +.++|..
T Consensus       208 ~~~~p~~~Y~~sK~~~E~~~~~~~~~~gl~~v~lRp~~vyGp~  250 (367)
T PLN02686        208 FCRDNKLWYALGKLKAEKAAWRAARGKGLKLATICPALVTGPG  250 (367)
T ss_pred             hcccccchHHHHHHHHHHHHHHHHHhcCceEEEEcCCceECCC
Confidence            00011123455555555665666676677665554 5688864

>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor

Probab=97.59  E-value=0.00015  Score=65.47  Aligned_cols=167  Identities=19%  Similarity=0.171  Sum_probs=94.3

Q ss_pred             EEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC-chhHHHHHhcCCCCCeEEE-EeCCCcHHhhhCCC--cEEEEcCCC
Q 018512           45 VAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN-TPGVTADISHMDTGAVVRG-FLGQPQLENALTGM--DLVIIPAGV  120 (354)
Q Consensus        45 I~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~-~~g~~~dl~~~~~~~~v~~-~~~~~d~~~al~~a--DvVIi~ag~  120 (354)
                      |+|+||+|++|+.++..|+.++.  +++.+.... ............   .+.. .....++.+++++.  |.||++|+.
T Consensus         1 IlI~GatG~iG~~l~~~l~~~g~--~v~~~~~~~~~~~~~~~~~~~~---~~~~dl~~~~~~~~~~~~~~~d~vi~~a~~   75 (236)
T PF01370_consen    1 ILITGATGFIGSALVRQLLKKGH--EVIVLSRSSNSESFEEKKLNVE---FVIGDLTDKEQLEKLLEKANIDVVIHLAAF   75 (236)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTT--EEEEEESCSTGGHHHHHHTTEE---EEESETTSHHHHHHHHHHHTESEEEEEBSS
T ss_pred             EEEEccCCHHHHHHHHHHHHcCC--ccccccccccccccccccceEE---EEEeeccccccccccccccCceEEEEeecc
Confidence            78999999999999999999998  666555544 222222111100   0110 11123455667777  999999886


Q ss_pred             CC--CCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCCchHHHHHHHHHhCCCCCCCEEEeccchHHHHHHH
Q 018512          121 PR--KPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTF  198 (354)
Q Consensus       121 ~~--~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~~~~~~~~~~p~~kviG~t~ld~~r~~~~  198 (354)
                      ..  .......+....|+...+++.+.+++.....++...|--+.....  ...+.....+.+...+|.+.....++...
T Consensus        76 ~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~i~~sS~~~y~~~~--~~~~~e~~~~~~~~~Y~~~K~~~e~~~~~  153 (236)
T PF01370_consen   76 SSNPESFEDPEEIIEANVQGTRNLLEAAREAGVKRFIFLSSASVYGDPD--GEPIDEDSPINPLSPYGASKRAAEELLRD  153 (236)
T ss_dssp             SSHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTSEEEEEEEGGGGTSSS--SSSBETTSGCCHSSHHHHHHHHHHHHHHH
T ss_pred             ccccccccccccccccccccccccccccccccccccccccccccccccc--ccccccccccccccccccccccccccccc
Confidence            53  111345677889999999999999999874444443311100000  00000000011122344444445556666


Q ss_pred             HHHHhCCCCCCCc-ceEEeec
Q 018512          199 VAEVLGLDPRDVD-VPVVGGH  218 (354)
Q Consensus       199 la~~l~v~~~~v~-~~v~G~h  218 (354)
                      +++..+++...++ ..++|.+
T Consensus       154 ~~~~~~~~~~~~R~~~vyG~~  174 (236)
T PF01370_consen  154 YAKKYGLRVTILRPPNVYGPG  174 (236)
T ss_dssp             HHHHHTSEEEEEEESEEESTT
T ss_pred             ccccccccccccccccccccc
Confidence            6666677766664 4567765

The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....

>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase

Probab=97.59  E-value=0.00051  Score=65.03  Aligned_cols=109  Identities=11%  Similarity=0.119  Sum_probs=66.9

Q ss_pred             EEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhh----hCCCcEEEEcCCC
Q 018512           45 VAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENA----LTGMDLVIIPAGV  120 (354)
Q Consensus        45 I~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~a----l~~aDvVIi~ag~  120 (354)
                      |.|+||+|++|++++..|...+.. +|+++|..........+........+.   ....++..    +.++|+||++|+.
T Consensus         1 ilItGatG~iG~~l~~~L~~~g~~-~v~~~~~~~~~~~~~~~~~~~~~~d~~---~~~~~~~~~~~~~~~~D~vvh~A~~   76 (314)
T TIGR02197         1 IIVTGGAGFIGSNLVKALNERGIT-DILVVDNLRDGHKFLNLADLVIADYID---KEDFLDRLEKGAFGKIEAIFHQGAC   76 (314)
T ss_pred             CEEeCCcchhhHHHHHHHHHcCCc-eEEEEecCCCchhhhhhhheeeeccCc---chhHHHHHHhhccCCCCEEEECccc
Confidence            679999999999999999988842 688888654211111111100000111   11122222    2589999999986


Q ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 018512          121 PRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  159 (354)
Q Consensus       121 ~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~t  159 (354)
                      .........+....|+....++++.+.+... . ++.+|
T Consensus        77 ~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~-~-~v~~S  113 (314)
T TIGR02197        77 SDTTETDGEYMMENNYQYSKRLLDWCAEKGI-P-FIYAS  113 (314)
T ss_pred             cCccccchHHHHHHHHHHHHHHHHHHHHhCC-c-EEEEc
Confidence            4322233455678899999999999988754 3 44444

This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).

>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]

Probab=97.57  E-value=0.00081  Score=66.11  Aligned_cols=77  Identities=22%  Similarity=0.225  Sum_probs=51.0

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCch-hHHHHHhcCCCC-CeEEEEeCCCcHHhhhCCCcEEEEcCC
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP-GVTADISHMDTG-AVVRGFLGQPQLENALTGMDLVIIPAG  119 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~-g~~~dl~~~~~~-~~v~~~~~~~d~~~al~~aDvVIi~ag  119 (354)
                      ++||.|||| |+||+.+|..|++++. .+|++.|+...+ ..+.+..+.... ..+.. .....+.+++++.|+||.++.
T Consensus         1 m~~ilviGa-G~Vg~~va~~la~~~d-~~V~iAdRs~~~~~~i~~~~~~~v~~~~vD~-~d~~al~~li~~~d~VIn~~p   77 (389)
T COG1748           1 MMKILVIGA-GGVGSVVAHKLAQNGD-GEVTIADRSKEKCARIAELIGGKVEALQVDA-ADVDALVALIKDFDLVINAAP   77 (389)
T ss_pred             CCcEEEECC-chhHHHHHHHHHhCCC-ceEEEEeCCHHHHHHHHhhccccceeEEecc-cChHHHHHHHhcCCEEEEeCC
Confidence            479999999 9999999999999885 599999997521 122222211110 11111 112345788999999999975


Q ss_pred             CC
Q 018512          120 VP  121 (354)
Q Consensus       120 ~~  121 (354)
                      ..
T Consensus        78 ~~   79 (389)
T COG1748          78 PF   79 (389)
T ss_pred             ch
Confidence            33

>PRK14620 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional

Probab=97.56  E-value=0.00054  Score=66.03  Aligned_cols=97  Identities=19%  Similarity=0.388  Sum_probs=62.6

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhc----CC------CCCeEEEEeCCCcHHhhh-CCC
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISH----MD------TGAVVRGFLGQPQLENAL-TGM  111 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~----~~------~~~~v~~~~~~~d~~~al-~~a  111 (354)
                      |||+|||| |.+|+.++..|...++  +|.++++++.  .+..+..    ..      ....++.   +.++.+++ .++
T Consensus         1 MkI~IiGa-Ga~G~ala~~L~~~g~--~V~l~~r~~~--~~~~i~~~~~~~~~~~~~~~~~~i~~---~~~~~~~~~~~~   72 (326)
T PRK14620          1 MKISILGA-GSFGTAIAIALSSKKI--SVNLWGRNHT--TFESINTKRKNLKYLPTCHLPDNISV---KSAIDEVLSDNA   72 (326)
T ss_pred             CEEEEECc-CHHHHHHHHHHHHCCC--eEEEEecCHH--HHHHHHHcCCCcccCCCCcCCCCeEE---eCCHHHHHhCCC
Confidence            68999999 9999999999999887  8999999652  1122221    10      0112333   24666666 589


Q ss_pred             cEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhh-h-CCCeEEEEecCCCC
Q 018512          112 DLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAK-C-CPNATVNLISNPVN  163 (354)
Q Consensus       112 DvVIi~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~-~-~p~a~viv~tNPv~  163 (354)
                      |+||++..                ...+.++++.+.. + .++..|+..+|=.+
T Consensus        73 Dliiiavk----------------s~~~~~~l~~l~~~~l~~~~~vv~~~nGi~  110 (326)
T PRK14620         73 TCIILAVP----------------TQQLRTICQQLQDCHLKKNTPILICSKGIE  110 (326)
T ss_pred             CEEEEEeC----------------HHHHHHHHHHHHHhcCCCCCEEEEEEcCee
Confidence            99999842                1234455555554 3 36777777777664

>PRK06249 2-dehydropantoate 2-reductase; Provisional

Probab=97.56  E-value=0.00052  Score=65.84  Aligned_cols=122  Identities=16%  Similarity=0.255  Sum_probs=72.3

Q ss_pred             CCCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHH---HHhcCCCCC---eEEEEeCCCcHHhhhCCCc
Q 018512           39 GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTA---DISHMDTGA---VVRGFLGQPQLENALTGMD  112 (354)
Q Consensus        39 ~~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~---dl~~~~~~~---~v~~~~~~~d~~~al~~aD  112 (354)
                      ++..|||+|+|+ |.+|..++..|...|+  +|.+++++..+....   .+.......   .+..   .++ .++...+|
T Consensus         2 ~~~~m~I~IiG~-GaiG~~lA~~L~~~g~--~V~~~~r~~~~~~~~~g~~~~~~~~~~~~~~~~~---~~~-~~~~~~~D   74 (313)
T PRK06249          2 DSETPRIGIIGT-GAIGGFYGAMLARAGF--DVHFLLRSDYEAVRENGLQVDSVHGDFHLPPVQA---YRS-AEDMPPCD   74 (313)
T ss_pred             CCcCcEEEEECC-CHHHHHHHHHHHHCCC--eEEEEEeCCHHHHHhCCeEEEeCCCCeeecCceE---Ecc-hhhcCCCC
Confidence            456689999999 9999999999999887  899999875211111   000000000   1111   122 23578899


Q ss_pred             EEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhh-CCCeEEEEecCCCCCchHHHHHHHHHhCCCCCCCEEEe-ccc
Q 018512          113 LVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKC-CPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TML  190 (354)
Q Consensus       113 vVIi~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~-~p~a~viv~tNPv~~~~~~~~~~~~~~~~~p~~kviG~-t~l  190 (354)
                      +||++.-...                ..+.++.+... .+++.|+...|=.+..-     .+.+.  +|+.+|++- +..
T Consensus        75 ~vilavK~~~----------------~~~~~~~l~~~~~~~~~iv~lqNG~~~~e-----~l~~~--~~~~~v~~g~~~~  131 (313)
T PRK06249         75 WVLVGLKTTA----------------NALLAPLIPQVAAPDAKVLLLQNGLGVEE-----QLREI--LPAEHLLGGLCFI  131 (313)
T ss_pred             EEEEEecCCC----------------hHhHHHHHhhhcCCCCEEEEecCCCCcHH-----HHHHH--CCCCcEEEEeeeE
Confidence            9999843221                12333344333 37888888888776542     23332  677787654 443

>PRK14618 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional

Probab=97.56  E-value=0.00073  Score=65.21  Aligned_cols=71  Identities=25%  Similarity=0.397  Sum_probs=48.8

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhc-----C-CC--CCeEEEEeCCCcHHhhhCCCcE
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISH-----M-DT--GAVVRGFLGQPQLENALTGMDL  113 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~-----~-~~--~~~v~~~~~~~d~~~al~~aDv  113 (354)
                      .|||+|||+ |.+|+.++..|+..|+  +|+++|+++.......-.+     . ..  ...+..   +.++.++++++|+
T Consensus         4 ~m~I~iIG~-G~mG~~ia~~L~~~G~--~V~~~~r~~~~~~~i~~~~~~~~~~~g~~~~~~~~~---~~~~~e~~~~aD~   77 (328)
T PRK14618          4 GMRVAVLGA-GAWGTALAVLAASKGV--PVRLWARRPEFAAALAAERENREYLPGVALPAELYP---TADPEEALAGADF   77 (328)
T ss_pred             CCeEEEECc-CHHHHHHHHHHHHCCC--eEEEEeCCHHHHHHHHHhCcccccCCCCcCCCCeEE---eCCHHHHHcCCCE
Confidence            689999999 9999999999999888  8999999752211111111     0 10  011222   3466778899999


Q ss_pred             EEEcC
Q 018512          114 VIIPA  118 (354)
Q Consensus       114 VIi~a  118 (354)
                      ||++.
T Consensus        78 Vi~~v   82 (328)
T PRK14618         78 AVVAV   82 (328)
T ss_pred             EEEEC
Confidence            99984

>PRK05866 short chain dehydrogenase; Provisional

Probab=97.55  E-value=0.0014  Score=62.13  Aligned_cols=106  Identities=17%  Similarity=0.198  Sum_probs=61.6

Q ss_pred             HHHHhccCCCcc---cchhhhhhhhcccCCCCCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHH
Q 018512           12 ARISAHLYPPNL---QENSCLRQAKCRAKGGAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADI   86 (354)
Q Consensus        12 ~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl   86 (354)
                      .|+..+++--+|   ..++.+..++.++......++|.|+||+|.+|..++..|+..|.  +|+++|++.  ......++
T Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~vlItGasggIG~~la~~La~~G~--~Vi~~~R~~~~l~~~~~~l   84 (293)
T PRK05866          7 RRLTDQLTLAGMRPPISPQLLINRPPRQPVDLTGKRILLTGASSGIGEAAAEQFARRGA--TVVAVARREDLLDAVADRI   84 (293)
T ss_pred             HHHHHHHHHhccCCCCCchhhcCCCCCCCcCCCCCEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHH
Confidence            344444444444   23344443444432233446899999999999999999999887  899999875  22222333


Q ss_pred             hcCCCCCeEEEE----eCCCcHHhhh-------CCCcEEEEcCCCC
Q 018512           87 SHMDTGAVVRGF----LGQPQLENAL-------TGMDLVIIPAGVP  121 (354)
Q Consensus        87 ~~~~~~~~v~~~----~~~~d~~~al-------~~aDvVIi~ag~~  121 (354)
                      ....  ..+..+    ....+..+++       .+.|+||++||..
T Consensus        85 ~~~~--~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~id~li~~AG~~  128 (293)
T PRK05866         85 TRAG--GDAMAVPCDLSDLDAVDALVADVEKRIGGVDILINNAGRS  128 (293)
T ss_pred             HhcC--CcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence            2211  111111    1111222333       3789999999864

>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional

Probab=97.54  E-value=0.0031  Score=58.01  Aligned_cols=117  Identities=14%  Similarity=0.172  Sum_probs=67.0

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCCCCeEEEEe-CCCc---HHhhh-------C
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQ---LENAL-------T  109 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~~~~v~~~~-~~~d---~~~al-------~  109 (354)
                      .+|.|+||+|.+|.+++..|+..|.  +|+++|++.  ......++........+..+. +-++   ...++       .
T Consensus         3 k~ilItG~~~~IG~~la~~l~~~g~--~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~   80 (259)
T PRK12384          3 QVAVVIGGGQTLGAFLCHGLAEEGY--RVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEIFG   80 (259)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            3799999999999999999999887  899999875  222222232211101122211 1122   22222       4


Q ss_pred             CCcEEEEcCCCCCCC---CCCHHH---HHHHHHHH----HHHHHHHHhhhCCCeEEEEecCC
Q 018512          110 GMDLVIIPAGVPRKP---GMTRDD---LFNINAGI----VRTLCEGIAKCCPNATVNLISNP  161 (354)
Q Consensus       110 ~aDvVIi~ag~~~~~---g~~r~d---~~~~n~~~----~~~i~~~i~~~~p~a~viv~tNP  161 (354)
                      ..|+||+++|.+...   .....+   .+..|+..    .+.+.+.+.+..+++.++++|..
T Consensus        81 ~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~~ss~  142 (259)
T PRK12384         81 RVDLLVYNAGIAKAAFITDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDGIQGRIIQINSK  142 (259)
T ss_pred             CCCEEEECCCcCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCcEEEEecCc
Confidence            679999999865322   122222   33455544    45566666555545667766653

>PRK15182 Vi polysaccharide biosynthesis protein TviB; Provisional

Probab=97.54  E-value=0.0012  Score=66.22  Aligned_cols=113  Identities=15%  Similarity=0.134  Sum_probs=68.2

Q ss_pred             CCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCC------------CCeEEEEeCCCcHHhh
Q 018512           40 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDT------------GAVVRGFLGQPQLENA  107 (354)
Q Consensus        40 ~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~------------~~~v~~~~~~~d~~~a  107 (354)
                      .++|||+|||. |+||..+|..|+. ++  +|+.||+++.  .+..|.....            ...+..   +++. ++
T Consensus         4 ~~~mkI~vIGl-GyvGlpmA~~la~-~~--~V~g~D~~~~--~ve~l~~G~~~~~e~~~~~l~~~g~l~~---t~~~-~~   73 (425)
T PRK15182          4 IDEVKIAIIGL-GYVGLPLAVEFGK-SR--QVVGFDVNKK--RILELKNGVDVNLETTEEELREARYLKF---TSEI-EK   73 (425)
T ss_pred             CCCCeEEEECc-CcchHHHHHHHhc-CC--EEEEEeCCHH--HHHHHHCcCCCCCCCCHHHHHhhCCeeE---EeCH-HH
Confidence            45689999999 9999999999876 45  9999999862  2233332110            011222   3444 57


Q ss_pred             hCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCeEEEE-ecCCCCCchHH
Q 018512          108 LTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNL-ISNPVNSTVPI  168 (354)
Q Consensus       108 l~~aDvVIi~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~-p~a~viv-~tNPv~~~~~~  168 (354)
                      +++||++|++.+.|.+....      ..+..+....+.|.++. +..+||+ .|-|.+....+
T Consensus        74 ~~~advvii~Vptp~~~~~~------~dl~~v~~a~~~i~~~l~~g~lVI~~STv~pgtt~~~  130 (425)
T PRK15182         74 IKECNFYIITVPTPINTYKQ------PDLTPLIKASETVGTVLNRGDIVVYESTVYPGCTEEE  130 (425)
T ss_pred             HcCCCEEEEEcCCCCCCCCC------cchHHHHHHHHHHHHhcCCCCEEEEecCCCCcchHHH
Confidence            89999999998888543211      12223333344444443 3444444 46777665533

>PRK08267 short chain dehydrogenase; Provisional

Probab=97.54  E-value=0.0019  Score=59.64  Aligned_cols=114  Identities=24%  Similarity=0.292  Sum_probs=65.0

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCch--hHHHHHhcCCCCCeE-EE-EeCCCcHHhhh--------CC
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP--GVTADISHMDTGAVV-RG-FLGQPQLENAL--------TG  110 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~--g~~~dl~~~~~~~~v-~~-~~~~~d~~~al--------~~  110 (354)
                      +++.|+||+|.+|..++..|+..|.  +|+++|++...  ....++..  ..... .. +....++.+++        ..
T Consensus         2 k~vlItGasg~iG~~la~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~v~~~~~~~~~~~~~~   77 (260)
T PRK08267          2 KSIFITGAASGIGRATALLFAAEGW--RVGAYDINEAGLAALAAELGA--GNAWTGALDVTDRAAWDAALADFAAATGGR   77 (260)
T ss_pred             cEEEEeCCCchHHHHHHHHHHHCCC--eEEEEeCCHHHHHHHHHHhcC--CceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            4699999999999999999999887  89999987521  11122221  11111 11 11112223333        34


Q ss_pred             CcEEEEcCCCCCCCC---CC---HHHHHHHHHHHHHHHHHHHhh---hCCCeEEEEecC
Q 018512          111 MDLVIIPAGVPRKPG---MT---RDDLFNINAGIVRTLCEGIAK---CCPNATVNLISN  160 (354)
Q Consensus       111 aDvVIi~ag~~~~~g---~~---r~d~~~~n~~~~~~i~~~i~~---~~p~a~viv~tN  160 (354)
                      .|+||+++|......   .+   ....+..|+.....+.+.+.+   ..+.+.++++|.
T Consensus        78 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS  136 (260)
T PRK08267         78 LDVLFNNAGILRGGPFEDIPLEAHDRVIDINVKGVLNGAHAALPYLKATPGARVINTSS  136 (260)
T ss_pred             CCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEeCc
Confidence            599999998753221   11   234456677655555555432   234455665554

>TIGR01179 galE UDP-glucose-4-epimerase

Probab=97.53  E-value=0.00076  Score=63.87  Aligned_cols=108  Identities=16%  Similarity=0.083  Sum_probs=67.9

Q ss_pred             eEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc-hh-HHHHHhcCCCCCeEEEEe-C---CCcHHhhhC--CCcEEE
Q 018512           44 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT-PG-VTADISHMDTGAVVRGFL-G---QPQLENALT--GMDLVI  115 (354)
Q Consensus        44 kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~-~g-~~~dl~~~~~~~~v~~~~-~---~~d~~~al~--~aDvVI  115 (354)
                      ||.|+||+|++|+.++..|...+.  +|+++|.... .. ....+.+..   .+..+. +   ..++.++++  +.|+||
T Consensus         1 kvlV~GatG~iG~~l~~~l~~~g~--~V~~~~~~~~~~~~~~~~~~~~~---~~~~~~~D~~~~~~~~~~~~~~~~d~vv   75 (328)
T TIGR01179         1 KILVTGGAGYIGSHTVRQLLESGH--EVVVLDNLSNGSPEALKRGERIT---RVTFVEGDLRDRELLDRLFEEHKIDAVI   75 (328)
T ss_pred             CEEEeCCCCHHHHHHHHHHHhCCC--eEEEEeCCCccchhhhhhhcccc---ceEEEECCCCCHHHHHHHHHhCCCcEEE
Confidence            689999999999999999998887  7888886431 11 111111110   122111 1   122344453  699999


Q ss_pred             EcCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEE
Q 018512          116 IPAGVPRKP--GMTRDDLFNINAGIVRTLCEGIAKCCPNATVN  156 (354)
Q Consensus       116 i~ag~~~~~--g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~vi  156 (354)
                      +++|.....  .....+.+..|+.....+++.+.+.+...+|.
T Consensus        76 ~~ag~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~  118 (328)
T TIGR01179        76 HFAGLIAVGESVQDPLKYYRNNVVNTLNLLEAMQQTGVKKFIF  118 (328)
T ss_pred             ECccccCcchhhcCchhhhhhhHHHHHHHHHHHHhcCCCEEEE
Confidence            999864321  12234556789999999999988776554443

This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.

>PRK12320 hypothetical protein; Provisional

Probab=97.53  E-value=0.00076  Score=71.21  Aligned_cols=100  Identities=13%  Similarity=0.107  Sum_probs=66.9

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEE-EeCCCcHHhhhCCCcEEEEcCCCC
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRG-FLGQPQLENALTGMDLVIIPAGVP  121 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~-~~~~~d~~~al~~aDvVIi~ag~~  121 (354)
                      |||.|+||+|++|++++..|+..|+  +|+.+|.....     ..+... ..+.. +. ...+.+++.++|+||++++..
T Consensus         1 MkILVTGAaGFIGs~La~~Ll~~G~--~Vi~ldr~~~~-----~~~~~v-e~v~~Dl~-d~~l~~al~~~D~VIHLAa~~   71 (699)
T PRK12320          1 MQILVTDATGAVGRSVTRQLIAAGH--TVSGIAQHPHD-----ALDPRV-DYVCASLR-NPVLQELAGEADAVIHLAPVD   71 (699)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCC--EEEEEeCChhh-----cccCCc-eEEEccCC-CHHHHHHhcCCCEEEEcCccC
Confidence            6999999999999999999999887  89999975421     111110 11111 11 112456678999999998753


Q ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 018512          122 RKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  159 (354)
Q Consensus       122 ~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~t  159 (354)
                      .  .    +....|+....++++.+++.+.  .+|.+|
T Consensus        72 ~--~----~~~~vNv~Gt~nLleAA~~~Gv--RiV~~S  101 (699)
T PRK12320         72 T--S----APGGVGITGLAHVANAAARAGA--RLLFVS  101 (699)
T ss_pred             c--c----chhhHHHHHHHHHHHHHHHcCC--eEEEEE
Confidence            1  1    1124688899999999987764  344444

>PRK07523 gluconate 5-dehydrogenase; Provisional

Probab=97.52  E-value=0.002  Score=59.28  Aligned_cols=115  Identities=15%  Similarity=0.191  Sum_probs=67.9

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCCCCeEEEEe-CCCc---HHhh-------h
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQ---LENA-------L  108 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~~~~v~~~~-~~~d---~~~a-------l  108 (354)
                      .++|.|+||+|.+|..++..|+..|.  +|++.|+++  ......++....  ..+..+. +-+|   +.++       +
T Consensus        10 ~k~vlItGa~g~iG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~i~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~   85 (255)
T PRK07523         10 GRRALVTGSSQGIGYALAEGLAQAGA--EVILNGRDPAKLAAAAESLKGQG--LSAHALAFDVTDHDAVRAAIDAFEAEI   85 (255)
T ss_pred             CCEEEEECCcchHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHHHHhcC--ceEEEEEccCCCHHHHHHHHHHHHHhc
Confidence            45899999999999999999999887  899999876  222222333221  1122110 1112   2222       2


Q ss_pred             CCCcEEEEcCCCCCCC---CCC---HHHHHHHHHHHHHHHHHHHhhhC---CCeEEEEecC
Q 018512          109 TGMDLVIIPAGVPRKP---GMT---RDDLFNINAGIVRTLCEGIAKCC---PNATVNLISN  160 (354)
Q Consensus       109 ~~aDvVIi~ag~~~~~---g~~---r~d~~~~n~~~~~~i~~~i~~~~---p~a~viv~tN  160 (354)
                      ...|+||+.+|.....   ..+   ..+.+..|+.....+.+.+.++.   ..+.|+++|.
T Consensus        86 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss  146 (255)
T PRK07523         86 GPIDILVNNAGMQFRTPLEDFPADAFERLLRTNISSVFYVGQAVARHMIARGAGKIINIAS  146 (255)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEEcc
Confidence            4579999998864211   111   23345677766666666555442   3456666664

>PRK05717 oxidoreductase; Validated

Probab=97.51  E-value=0.0015  Score=60.20  Aligned_cols=148  Identities=15%  Similarity=0.167  Sum_probs=82.5

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCe-EEE-EeCCCcHHhh-------hCCCc
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAV-VRG-FLGQPQLENA-------LTGMD  112 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~-v~~-~~~~~d~~~a-------l~~aD  112 (354)
                      .++|.|+||+|++|++++..|+..|.  +|+++|++....... ..+...... +.. +....+..++       +...|
T Consensus        10 ~k~vlItG~sg~IG~~~a~~l~~~g~--~v~~~~~~~~~~~~~-~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id   86 (255)
T PRK05717         10 GRVALVTGAARGIGLGIAAWLIAEGW--QVVLADLDRERGSKV-AKALGENAWFIAMDVADEAQVAAGVAEVLGQFGRLD   86 (255)
T ss_pred             CCEEEEeCCcchHHHHHHHHHHHcCC--EEEEEcCCHHHHHHH-HHHcCCceEEEEccCCCHHHHHHHHHHHHHHhCCCC
Confidence            45799999999999999999999887  899999865221111 111111111 111 1011111111       23479


Q ss_pred             EEEEcCCCCCCCC-----CC---HHHHHHHHHHHHHHHHHHHhhhC--CCeEEEEecCCCCCchHHHHHHHHHhCCCCCC
Q 018512          113 LVIIPAGVPRKPG-----MT---RDDLFNINAGIVRTLCEGIAKCC--PNATVNLISNPVNSTVPIAAEVFKKAGTYDPK  182 (354)
Q Consensus       113 vVIi~ag~~~~~g-----~~---r~d~~~~n~~~~~~i~~~i~~~~--p~a~viv~tNPv~~~~~~~~~~~~~~~~~p~~  182 (354)
                      +||+++|......     .+   ....+..|+.....+.+.+.++.  ..+.||++|......            +.|..
T Consensus        87 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~ii~~sS~~~~~------------~~~~~  154 (255)
T PRK05717         87 ALVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAKHCAPYLRAHNGAIVNLASTRARQ------------SEPDT  154 (255)
T ss_pred             EEEECCCcccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCcEEEEEcchhhcC------------CCCCC
Confidence            9999998653211     12   23456677777777777765432  345566665432111            22323


Q ss_pred             CEEEeccchHHHHHHHHHHHhC
Q 018512          183 KLLGVTMLDVVRANTFVAEVLG  204 (354)
Q Consensus       183 kviG~t~ld~~r~~~~la~~l~  204 (354)
                      -.+|.+......+.+.+++.++
T Consensus       155 ~~Y~~sKaa~~~~~~~la~~~~  176 (255)
T PRK05717        155 EAYAASKGGLLALTHALAISLG  176 (255)
T ss_pred             cchHHHHHHHHHHHHHHHHHhc
Confidence            3456654444456677777765

>PRK11064 wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Provisional

Probab=97.49  E-value=0.0014  Score=65.57  Aligned_cols=109  Identities=20%  Similarity=0.205  Sum_probs=66.7

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCC--C--------------CCeEEEEeCCCcHH
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMD--T--------------GAVVRGFLGQPQLE  105 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~--~--------------~~~v~~~~~~~d~~  105 (354)
                      .+||+|||. |++|..+|..|+..|+  +|+.+|+++.+-.  .+....  .              ...+..   +++  
T Consensus         3 ~~kI~VIGl-G~~G~~~A~~La~~G~--~V~~~D~~~~~v~--~l~~g~~~~~e~~l~~~l~~~~~~g~l~~---~~~--   72 (415)
T PRK11064          3 FETISVIGL-GYIGLPTAAAFASRQK--QVIGVDINQHAVD--TINRGEIHIVEPDLDMVVKTAVEGGYLRA---TTT--   72 (415)
T ss_pred             ccEEEEECc-chhhHHHHHHHHhCCC--EEEEEeCCHHHHH--HHHCCCCCcCCCCHHHHHHHHhhcCceee---ecc--
Confidence            579999999 9999999999999997  9999999862211  122110  0              011211   122  


Q ss_pred             hhhCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEe-cCCCCCchHH
Q 018512          106 NALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLI-SNPVNSTVPI  168 (354)
Q Consensus       106 ~al~~aDvVIi~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~-p~a~viv~-tNPv~~~~~~  168 (354)
                        .++||+||++...|.....      ..++..+.+.++.+.++. ++.+||+- |.|.+..-.+
T Consensus        73 --~~~aDvvii~vptp~~~~~------~~dl~~v~~~~~~i~~~l~~g~iVI~~STv~pgtt~~~  129 (415)
T PRK11064         73 --PEPADAFLIAVPTPFKGDH------EPDLTYVEAAAKSIAPVLKKGDLVILESTSPVGATEQM  129 (415)
T ss_pred             --cccCCEEEEEcCCCCCCCC------CcChHHHHHHHHHHHHhCCCCCEEEEeCCCCCCHHHHH
Confidence              3589999999887753221      112334445555555554 45555554 4677665444

>PRK12829 short chain dehydrogenase; Provisional

Probab=97.49  E-value=0.0027  Score=58.42  Aligned_cols=114  Identities=19%  Similarity=0.323  Sum_probs=64.9

Q ss_pred             CCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc--hhHHHHHhcCCCCCeEEEEe-CCCc---HHhh------
Q 018512           40 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFL-GQPQ---LENA------  107 (354)
Q Consensus        40 ~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~--~g~~~dl~~~~~~~~v~~~~-~~~d---~~~a------  107 (354)
                      .+.+++.|+||+|.+|+.++..|+.+|.  +|+++++++.  .....++...    .+..+. +-.|   +.++      
T Consensus         9 ~~~~~vlItGa~g~iG~~~a~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~D~~~~~~~~~~~~~~~~   82 (264)
T PRK12829          9 LDGLRVLVTGGASGIGRAIAEAFAEAGA--RVHVCDVSEAALAATAARLPGA----KVTATVADVADPAQVERVFDTAVE   82 (264)
T ss_pred             cCCCEEEEeCCCCcHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHhcC----ceEEEEccCCCHHHHHHHHHHHHH
Confidence            3456999999999999999999999888  8999998752  1111122211    111111 1112   1122      


Q ss_pred             -hCCCcEEEEcCCCCCCCC----CCH---HHHHHHHHHHHHHHHHHH----hhhCCCeEEEEec
Q 018512          108 -LTGMDLVIIPAGVPRKPG----MTR---DDLFNINAGIVRTLCEGI----AKCCPNATVNLIS  159 (354)
Q Consensus       108 -l~~aDvVIi~ag~~~~~g----~~r---~d~~~~n~~~~~~i~~~i----~~~~p~a~viv~t  159 (354)
                       +.++|+||+.+|.....+    .+.   ...+..|+.....+.+.+    .......+|++.|
T Consensus        83 ~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~vv~~s  146 (264)
T PRK12829         83 RFGGLDVLVNNAGIAGPTGGIDEITPEQWEQTLAVNLNGQFYFARAAVPLLKASGHGGVIIALS  146 (264)
T ss_pred             HhCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEec
Confidence             347899999988652222    122   233455655555555544    3322225555555

>TIGR03376 glycerol3P_DH glycerol-3-phosphate dehydrogenase (NAD(+))

Probab=97.48  E-value=0.00069  Score=65.88  Aligned_cols=96  Identities=22%  Similarity=0.392  Sum_probs=61.6

Q ss_pred             eEEEEcCCCchHHHHHHHHHhCC------CCcEEEEEecCC---chhHHHHHh--cCCC--------CCeEEEEeCCCcH
Q 018512           44 KVAILGAAGGIGQPLAMLMKINP------LVSVLHLYDVVN---TPGVTADIS--HMDT--------GAVVRGFLGQPQL  104 (354)
Q Consensus        44 kI~IiGa~G~vG~~~a~~l~~~~------~~~ei~L~D~~~---~~g~~~dl~--~~~~--------~~~v~~~~~~~d~  104 (354)
                      ||+|||+ |..|+++|..|..++      ...+|.|+.+++   .......++  |...        ...++.   ++|+
T Consensus         1 kI~VIGa-G~wGtALA~~la~ng~~~~~~~~~~V~lw~~~~~~~~~~~~~~in~~~~n~~ylpgi~Lp~~i~a---t~dl   76 (342)
T TIGR03376         1 RVAVVGS-GNWGTAIAKIVAENARALPELFEESVRMWVFEEEIEGRNLTEIINTTHENVKYLPGIKLPANLVA---VPDL   76 (342)
T ss_pred             CEEEECc-CHHHHHHHHHHHHcCCcccccCCceEEEEEeccccCCHHHHHHHHhcCCCccccCCCcCCCCeEE---ECCH
Confidence            6999999 999999999999877      113999999843   122223332  2111        112333   4688


Q ss_pred             HhhhCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEec
Q 018512          105 ENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLIS  159 (354)
Q Consensus       105 ~~al~~aDvVIi~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~-p~a~viv~t  159 (354)
                      ++++++||+||++.  |              ...+++++++++.+- ++..++.+|
T Consensus        77 ~eal~~ADiIIlAV--P--------------s~~i~~vl~~l~~~l~~~~~iVs~t  116 (342)
T TIGR03376        77 VEAAKGADILVFVI--P--------------HQFLEGICKQLKGHVKPNARAISCI  116 (342)
T ss_pred             HHHHhcCCEEEEEC--C--------------hHHHHHHHHHHHhhcCCCCEEEEEe
Confidence            89999999999973  2              134556666666543 345555554

Members of this protein family are the eukaryotic enzyme, glycerol-3-phosphate dehydrogenase (NAD(+)) (EC 1.1.1.8). Enzymatic activity for 1.1.1.8 is defined as sn-glycerol 3-phosphate + NAD(+) = glycerone phosphate + NADH. Note the very similar reactions of enzymes defined as EC 1.1.1.94 and 1.1.99.5, assigned to families of proteins in the bacteria.

>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional

Probab=97.48  E-value=0.001  Score=60.87  Aligned_cols=113  Identities=13%  Similarity=0.210  Sum_probs=65.7

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc--hhHHHHHhcCCCCCeEEEEe-CCCc---HHhhh-------
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFL-GQPQ---LENAL-------  108 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~--~g~~~dl~~~~~~~~v~~~~-~~~d---~~~al-------  108 (354)
                      .++|.|+||+|.+|++++..|+..|.  +|++++++..  .....++....  ..+..+. +-.+   +.+++       
T Consensus         4 ~~~vlItG~sg~iG~~la~~l~~~g~--~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~~~~   79 (258)
T PRK12429          4 GKVALVTGAASGIGLEIALALAKEGA--KVVIADLNDEAAAAAAEALQKAG--GKAIGVAMDVTDEEAINAGIDYAVETF   79 (258)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCC--eEEEEeCCHHHHHHHHHHHHhcC--CcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            35899999999999999999999887  8999998762  22233343221  1122111 1112   22222       


Q ss_pred             CCCcEEEEcCCCCCCCC---CC---HHHHHHHHHHH----HHHHHHHHhhhCCCeEEEEec
Q 018512          109 TGMDLVIIPAGVPRKPG---MT---RDDLFNINAGI----VRTLCEGIAKCCPNATVNLIS  159 (354)
Q Consensus       109 ~~aDvVIi~ag~~~~~g---~~---r~d~~~~n~~~----~~~i~~~i~~~~p~a~viv~t  159 (354)
                      .+.|+||++++......   .+   ..+.+..|+..    .+.+.+.+++.... .++++|
T Consensus        80 ~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~-~iv~is  139 (258)
T PRK12429         80 GGVDILVNNAGIQHVAPIEDFPTEKWKKMIAIMLDGAFLTTKAALPIMKAQGGG-RIINMA  139 (258)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCe-EEEEEc
Confidence            36899999988643211   11   12234455554    66666666655433 444444

>PRK12937 short chain dehydrogenase; Provisional

Probab=97.48  E-value=0.0019  Score=58.70  Aligned_cols=147  Identities=14%  Similarity=0.084  Sum_probs=80.9

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC---chhHHHHHhcCCCCCeEEEEe-C---CCcHHhhh------
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN---TPGVTADISHMDTGAVVRGFL-G---QPQLENAL------  108 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~---~~g~~~dl~~~~~~~~v~~~~-~---~~d~~~al------  108 (354)
                      .++|.|+||+|.+|+.++..|+..|.  ++++.+.+.   ......++....  ..+..+. +   ..++++++      
T Consensus         5 ~~~vlItG~~~~iG~~la~~l~~~g~--~v~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~~~   80 (245)
T PRK12937          5 NKVAIVTGASRGIGAAIARRLAADGF--AVAVNYAGSAAAADELVAEIEAAG--GRAIAVQADVADAAAVTRLFDAAETA   80 (245)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCC--EEEEecCCCHHHHHHHHHHHHhcC--CeEEEEECCCCCHHHHHHHHHHHHHH
Confidence            45899999999999999999999998  777776644   122223333222  1222211 1   11223333      


Q ss_pred             -CCCcEEEEcCCCCCCCC---CC---HHHHHHHHHHHHHHHHHHHhhh-CCCeEEEEecCCCCCchHHHHHHHHHhCCCC
Q 018512          109 -TGMDLVIIPAGVPRKPG---MT---RDDLFNINAGIVRTLCEGIAKC-CPNATVNLISNPVNSTVPIAAEVFKKAGTYD  180 (354)
Q Consensus       109 -~~aDvVIi~ag~~~~~g---~~---r~d~~~~n~~~~~~i~~~i~~~-~p~a~viv~tNPv~~~~~~~~~~~~~~~~~p  180 (354)
                       .+.|+||+++|......   .+   ....+..|+.....+++.+.+. .+.+.++++|.-...            .+.|
T Consensus        81 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~------------~~~~  148 (245)
T PRK12937         81 FGRIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQGGRIINLSTSVIA------------LPLP  148 (245)
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhccCcEEEEEeecccc------------CCCC
Confidence             36899999998643211   11   2234566766666666555443 245666666532211            1233


Q ss_pred             CCCEEEeccchHHHHHHHHHHHhC
Q 018512          181 PKKLLGVTMLDVVRANTFVAEVLG  204 (354)
Q Consensus       181 ~~kviG~t~ld~~r~~~~la~~l~  204 (354)
                      ....++.+......+.+.+++.++
T Consensus       149 ~~~~Y~~sK~a~~~~~~~~a~~~~  172 (245)
T PRK12937        149 GYGPYAASKAAVEGLVHVLANELR  172 (245)
T ss_pred             CCchhHHHHHHHHHHHHHHHHHhh
Confidence            334455544333345555666553

>PRK07102 short chain dehydrogenase; Provisional

Probab=97.47  E-value=0.0043  Score=56.59  Aligned_cols=115  Identities=19%  Similarity=0.089  Sum_probs=67.3

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc--hhHHHHHhcCCCCCeEEEEe-C---CCcHHhhh----CCCc
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFL-G---QPQLENAL----TGMD  112 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~--~g~~~dl~~~~~~~~v~~~~-~---~~d~~~al----~~aD  112 (354)
                      ++|.|+||+|.+|..++..|+..|.  +|++.|+++.  .....++.... ...+..+. +   ..++++.+    +..|
T Consensus         2 ~~vlItGas~giG~~~a~~l~~~G~--~Vi~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~~~d   78 (243)
T PRK07102          2 KKILIIGATSDIARACARRYAAAGA--RLYLAARDVERLERLADDLRARG-AVAVSTHELDILDTASHAAFLDSLPALPD   78 (243)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhcCC--EEEEEeCCHHHHHHHHHHHHHhc-CCeEEEEecCCCChHHHHHHHHHHhhcCC
Confidence            5899999999999999999999887  8999998762  22223333221 12222211 1   11222222    3459


Q ss_pred             EEEEcCCCCCC---CCCCHH---HHHHHHHHHHHHHHHHHhhhC---CCeEEEEecC
Q 018512          113 LVIIPAGVPRK---PGMTRD---DLFNINAGIVRTLCEGIAKCC---PNATVNLISN  160 (354)
Q Consensus       113 vVIi~ag~~~~---~g~~r~---d~~~~n~~~~~~i~~~i~~~~---p~a~viv~tN  160 (354)
                      +||+++|....   ...+..   +.+..|+.....+.+.+..+.   ..+.++++|-
T Consensus        79 ~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS  135 (243)
T PRK07102         79 IVLIAVGTLGDQAACEADPALALREFRTNFEGPIALLTLLANRFEARGSGTIVGISS  135 (243)
T ss_pred             EEEECCcCCCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCEEEEEec
Confidence            99998875321   122332   345667776666666655432   2455666653

>PRK12439 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional

Probab=97.47  E-value=0.00066  Score=66.04  Aligned_cols=100  Identities=18%  Similarity=0.175  Sum_probs=65.3

Q ss_pred             CCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcC----CCC-------CeEEEEeCCCcHHhhh
Q 018512           40 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHM----DTG-------AVVRGFLGQPQLENAL  108 (354)
Q Consensus        40 ~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~----~~~-------~~v~~~~~~~d~~~al  108 (354)
                      .++|||+|+|+ |.+|+.++..|...+   +++++..++..  ..++...    ...       ..+..   ++|+.+++
T Consensus         5 ~~~mkI~IiGa-Ga~G~alA~~La~~g---~v~l~~~~~~~--~~~i~~~~~~~~~l~~~~~l~~~i~~---t~d~~~a~   75 (341)
T PRK12439          5 KREPKVVVLGG-GSWGTTVASICARRG---PTLQWVRSAET--ADDINDNHRNSRYLGNDVVLSDTLRA---TTDFAEAA   75 (341)
T ss_pred             cCCCeEEEECC-CHHHHHHHHHHHHCC---CEEEEeCCHHH--HHHHHhcCCCcccCCCCcccCCCeEE---ECCHHHHH
Confidence            45689999999 999999999999887   36777765421  2222211    011       12222   35777889


Q ss_pred             CCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecCCCCC
Q 018512          109 TGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNS  164 (354)
Q Consensus       109 ~~aDvVIi~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~-p~a~viv~tNPv~~  164 (354)
                      +++|+||++..                ...++++++.+..+- ++..++.++|-.+.
T Consensus        76 ~~aDlVilavp----------------s~~~~~vl~~i~~~l~~~~~vIsl~kGi~~  116 (341)
T PRK12439         76 NCADVVVMGVP----------------SHGFRGVLTELAKELRPWVPVVSLVKGLEQ  116 (341)
T ss_pred             hcCCEEEEEeC----------------HHHHHHHHHHHHhhcCCCCEEEEEEeCCcC
Confidence            99999999842                124555666666543 56778888887664

>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.47  E-value=0.0039  Score=56.83  Aligned_cols=36  Identities=22%  Similarity=0.274  Sum_probs=32.5

Q ss_pred             CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC
Q 018512           41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   78 (354)
Q Consensus        41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~   78 (354)
                      +.++|+|+||+|.+|..++..|+..|.  +|++++++.
T Consensus         4 ~~~~vlItGasg~iG~~l~~~l~~~G~--~V~~~~r~~   39 (251)
T PRK07231          4 EGKVAIVTGASSGIGEGIARRFAAEGA--RVVVTDRNE   39 (251)
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCC--EEEEEeCCH
Confidence            346899999999999999999999887  899999976

>PRK07326 short chain dehydrogenase; Provisional

Probab=97.47  E-value=0.0022  Score=58.05  Aligned_cols=114  Identities=18%  Similarity=0.174  Sum_probs=65.1

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc--hhHHHHHhcCCCCCeEEEEe-CCC---cHHhhh-------C
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFL-GQP---QLENAL-------T  109 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~--~g~~~dl~~~~~~~~v~~~~-~~~---d~~~al-------~  109 (354)
                      ++|+|+||+|.+|+.++..|+..|.  +|+++++++.  .....++...   ..+..+. +-.   ++.+++       .
T Consensus         7 ~~ilItGatg~iG~~la~~l~~~g~--~V~~~~r~~~~~~~~~~~l~~~---~~~~~~~~D~~~~~~~~~~~~~~~~~~~   81 (237)
T PRK07326          7 KVALITGGSKGIGFAIAEALLAEGY--KVAITARDQKELEEAAAELNNK---GNVLGLAADVRDEADVQRAVDAIVAAFG   81 (237)
T ss_pred             CEEEEECCCCcHHHHHHHHHHHCCC--EEEEeeCCHHHHHHHHHHHhcc---CcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            5899999999999999999998877  8999998762  2222333321   1122111 111   222222       3


Q ss_pred             CCcEEEEcCCCCCCC---CCCHH---HHHHHHHHHHHHHHHHHhhh--CCCeEEEEecCC
Q 018512          110 GMDLVIIPAGVPRKP---GMTRD---DLFNINAGIVRTLCEGIAKC--CPNATVNLISNP  161 (354)
Q Consensus       110 ~aDvVIi~ag~~~~~---g~~r~---d~~~~n~~~~~~i~~~i~~~--~p~a~viv~tNP  161 (354)
                      ++|+||+++|.....   ..+..   +.+..|+.....+.+.+.+.  ...+.++++|..
T Consensus        82 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~  141 (237)
T PRK07326         82 GLDVLIANAGVGHFAPVEELTPEEWRLVIDTNLTGAFYTIKAAVPALKRGGGYIINISSL  141 (237)
T ss_pred             CCCEEEECCCCCCCCchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHHCCeEEEEECCh
Confidence            799999998764321   12222   33455655555554444332  234556666643

>PRK07814 short chain dehydrogenase; Provisional

Probab=97.44  E-value=0.0024  Score=59.18  Aligned_cols=148  Identities=14%  Similarity=0.116  Sum_probs=81.6

Q ss_pred             CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc--hhHHHHHhcCCCCCeEEEE-eCCCcH---Hhh-------
Q 018512           41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGF-LGQPQL---ENA-------  107 (354)
Q Consensus        41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~--~g~~~dl~~~~~~~~v~~~-~~~~d~---~~a-------  107 (354)
                      +.+++.|+||+|.+|.+++..|+..|.  +|++.|++..  +....++....  ..+..+ .+-++.   .++       
T Consensus         9 ~~~~vlItGasggIG~~~a~~l~~~G~--~Vi~~~r~~~~~~~~~~~l~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~   84 (263)
T PRK07814          9 DDQVAVVTGAGRGLGAAIALAFAEAGA--DVLIAARTESQLDEVAEQIRAAG--RRAHVVAADLAHPEATAGLAGQAVEA   84 (263)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcC--CcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            456899999999999999999999887  9999998752  22233333221  122221 111222   122       


Q ss_pred             hCCCcEEEEcCCCCCCC---CCC---HHHHHHHHHHHHHHHHHHHh----hhCCCeEEEEecCCCCCchHHHHHHHHHhC
Q 018512          108 LTGMDLVIIPAGVPRKP---GMT---RDDLFNINAGIVRTLCEGIA----KCCPNATVNLISNPVNSTVPIAAEVFKKAG  177 (354)
Q Consensus       108 l~~aDvVIi~ag~~~~~---g~~---r~d~~~~n~~~~~~i~~~i~----~~~p~a~viv~tNPv~~~~~~~~~~~~~~~  177 (354)
                      +...|+||+.||.....   ..+   ..+.+..|+.....+.+.+.    +....+.++++|.-....            
T Consensus        85 ~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~sS~~~~~------------  152 (263)
T PRK07814         85 FGRLDIVVNNVGGTMPNPLLSTSTKDLADAFTFNVATAHALTVAAVPLMLEHSGGGSVINISSTMGRL------------  152 (263)
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhcHHHHHHHHHHHHHHHhhcCCeEEEEEccccccC------------
Confidence            24789999998864221   112   22344556555555555443    334556666666432211            


Q ss_pred             CCCCCCEEEeccchHHHHHHHHHHHhC
Q 018512          178 TYDPKKLLGVTMLDVVRANTFVAEVLG  204 (354)
Q Consensus       178 ~~p~~kviG~t~ld~~r~~~~la~~l~  204 (354)
                      +.+..-.++.+......+.+.++..+.
T Consensus       153 ~~~~~~~Y~~sK~a~~~~~~~~~~e~~  179 (263)
T PRK07814        153 AGRGFAAYGTAKAALAHYTRLAALDLC  179 (263)
T ss_pred             CCCCCchhHHHHHHHHHHHHHHHHHHC
Confidence            223333455543333445666666654

>PRK08340 glucose-1-dehydrogenase; Provisional

Probab=97.44  E-value=0.0021  Score=59.30  Aligned_cols=113  Identities=16%  Similarity=0.162  Sum_probs=64.4

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCCCCeEEEEe-CCCc---HHhh-------hC
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQ---LENA-------LT  109 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~~~~v~~~~-~~~d---~~~a-------l~  109 (354)
                      |++.|+||+|.+|..++..|+..|.  +|++.|+++  ......++.+..   .+..+. +-+|   .+++       +.
T Consensus         1 m~vlItGas~gIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~l~~~~---~~~~~~~Dv~d~~~~~~~~~~~~~~~g   75 (259)
T PRK08340          1 MNVLVTASSRGIGFNVARELLKKGA--RVVISSRNEENLEKALKELKEYG---EVYAVKADLSDKDDLKNLVKEAWELLG   75 (259)
T ss_pred             CeEEEEcCCcHHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHHHHhcC---CceEEEcCCCCHHHHHHHHHHHHHhcC
Confidence            6899999999999999999999997  899999876  222233343221   111111 1112   2222       34


Q ss_pred             CCcEEEEcCCCCC-CC----CCCHHHH---HHHHH----HHHHHHHHHHhhhCCCeEEEEecC
Q 018512          110 GMDLVIIPAGVPR-KP----GMTRDDL---FNINA----GIVRTLCEGIAKCCPNATVNLISN  160 (354)
Q Consensus       110 ~aDvVIi~ag~~~-~~----g~~r~d~---~~~n~----~~~~~i~~~i~~~~p~a~viv~tN  160 (354)
                      ..|++|+.+|... .+    ..+..++   +..|+    ...+.+.+.+.+....+.|+++|.
T Consensus        76 ~id~li~naG~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~g~iv~isS  138 (259)
T PRK08340         76 GIDALVWNAGNVRCEPCMLHEAGYSDWLEAALLHLVAPGYLTTLLIQAWLEKKMKGVLVYLSS  138 (259)
T ss_pred             CCCEEEECCCCCCCCccccccccHHHHHHHHhhcchHHHHHHHHHHHHHHhcCCCCEEEEEeC
Confidence            7899999998642 11    1222222   22232    234455555543334566666653

>PRK06180 short chain dehydrogenase; Provisional

Probab=97.43  E-value=0.0036  Score=58.48  Aligned_cols=114  Identities=13%  Similarity=0.089  Sum_probs=65.6

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEe-CCCc---HHhhh-------CC
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFL-GQPQ---LENAL-------TG  110 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~-~~~d---~~~al-------~~  110 (354)
                      +++|.|+||+|.+|++++..|+..|.  +|++++++....  .++.... ...+..+. +-+|   +.+++       ..
T Consensus         4 ~~~vlVtGasggiG~~la~~l~~~G~--~V~~~~r~~~~~--~~l~~~~-~~~~~~~~~D~~d~~~~~~~~~~~~~~~~~   78 (277)
T PRK06180          4 MKTWLITGVSSGFGRALAQAALAAGH--RVVGTVRSEAAR--ADFEALH-PDRALARLLDVTDFDAIDAVVADAEATFGP   78 (277)
T ss_pred             CCEEEEecCCChHHHHHHHHHHhCcC--EEEEEeCCHHHH--HHHHhhc-CCCeeEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            35799999999999999999999887  899999875211  1222211 11111110 1112   22222       35


Q ss_pred             CcEEEEcCCCCCC---CCCCH---HHHHHHHHHHHHHHHHHHhhh---CCCeEEEEecC
Q 018512          111 MDLVIIPAGVPRK---PGMTR---DDLFNINAGIVRTLCEGIAKC---CPNATVNLISN  160 (354)
Q Consensus       111 aDvVIi~ag~~~~---~g~~r---~d~~~~n~~~~~~i~~~i~~~---~p~a~viv~tN  160 (354)
                      .|+||+++|....   ...+.   ...+..|+.....+.+.+.++   ...+.||++|.
T Consensus        79 ~d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~iSS  137 (277)
T PRK06180         79 IDVLVNNAGYGHEGAIEESPLAEMRRQFEVNVFGAVAMTKAVLPGMRARRRGHIVNITS  137 (277)
T ss_pred             CCEEEECCCccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCCEEEEEec
Confidence            8999999986421   11222   233667777666666664432   12345565553

>PRK06924 short chain dehydrogenase; Provisional

Probab=97.43  E-value=0.0023  Score=58.55  Aligned_cols=34  Identities=18%  Similarity=0.167  Sum_probs=30.8

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   78 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~   78 (354)
                      ++|.|+||+|.+|+.++..|+..|.  +|+++++++
T Consensus         2 k~vlItGasggiG~~ia~~l~~~g~--~V~~~~r~~   35 (251)
T PRK06924          2 RYVIITGTSQGLGEAIANQLLEKGT--HVISISRTE   35 (251)
T ss_pred             cEEEEecCCchHHHHHHHHHHhcCC--EEEEEeCCc
Confidence            4799999999999999999999887  899999865

>PRK14982 acyl-ACP reductase; Provisional

Probab=97.43  E-value=0.00085  Score=65.02  Aligned_cols=128  Identities=20%  Similarity=0.213  Sum_probs=76.5

Q ss_pred             HHHHHHh---ccCCCc-ccchhhhhhhhcc--cCC-CCCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--ch
Q 018512           10 RIARISA---HLYPPN-LQENSCLRQAKCR--AKG-GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TP   80 (354)
Q Consensus        10 ~~~~~~~---~~~~~~-~~~~~~~~~~~~~--~~~-~~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~   80 (354)
                      ++.+|+-   .+||-| +....+.+.+.-.  ..+ .-..++|+|+||+|++|+.++..|....-..+|++++++.  +.
T Consensus       116 ~~r~i~ie~~~~TtGNs~T~~ll~~~V~la~~~lg~~l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~  195 (340)
T PRK14982        116 QVRNTTLEWERFTTGNTHTAYVICRQVEQNAPRLGIDLSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQ  195 (340)
T ss_pred             ccccceeccccccCCchhHHHHHHHHHHHhHHHhccCcCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHH
Confidence            4444444   456666 2444444422211  112 3455799999999999999999997643234899999865  22


Q ss_pred             hHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecC
Q 018512           81 GVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISN  160 (354)
Q Consensus        81 g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tN  160 (354)
                      ....++.+.    .      -.++++++.++|+||.+++.+...-.+..++                  .+..+++=.+.
T Consensus       196 ~La~el~~~----~------i~~l~~~l~~aDiVv~~ts~~~~~~I~~~~l------------------~~~~~viDiAv  247 (340)
T PRK14982        196 ELQAELGGG----K------ILSLEEALPEADIVVWVASMPKGVEIDPETL------------------KKPCLMIDGGY  247 (340)
T ss_pred             HHHHHhccc----c------HHhHHHHHccCCEEEECCcCCcCCcCCHHHh------------------CCCeEEEEecC
Confidence            222222211    0      1246789999999999988764221222111                  25567777788


Q ss_pred             CCCCc
Q 018512          161 PVNST  165 (354)
Q Consensus       161 Pv~~~  165 (354)
                      |=|+-
T Consensus       248 PRDVd  252 (340)
T PRK14982        248 PKNLD  252 (340)
T ss_pred             CCCCC
Confidence            87776

>PRK05876 short chain dehydrogenase; Provisional

Probab=97.41  E-value=0.003  Score=59.21  Aligned_cols=115  Identities=17%  Similarity=0.150  Sum_probs=65.7

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCCCCeEEEEe-CCCc---HHhhh-------
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQ---LENAL-------  108 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~~~~v~~~~-~~~d---~~~al-------  108 (354)
                      .+.+.|+||+|.+|++++..|+..|.  +|++.|++.  ......++....  ..+..+. +-+|   +.+++       
T Consensus         6 ~k~vlVTGas~gIG~ala~~La~~G~--~Vv~~~r~~~~l~~~~~~l~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~~~   81 (275)
T PRK05876          6 GRGAVITGGASGIGLATGTEFARRGA--RVVLGDVDKPGLRQAVNHLRAEG--FDVHGVMCDVRHREEVTHLADEAFRLL   81 (275)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcC--CeEEEEeCCCCCHHHHHHHHHHHHHHc
Confidence            34799999999999999999999987  899999876  222233343221  1222211 1112   22222       


Q ss_pred             CCCcEEEEcCCCCCCC---CCCHH---HHHHHHHHHHH----HHHHHHhhhCCCeEEEEecC
Q 018512          109 TGMDLVIIPAGVPRKP---GMTRD---DLFNINAGIVR----TLCEGIAKCCPNATVNLISN  160 (354)
Q Consensus       109 ~~aDvVIi~ag~~~~~---g~~r~---d~~~~n~~~~~----~i~~~i~~~~p~a~viv~tN  160 (354)
                      ...|+||+.||.....   ..+..   ..+..|+....    .+.+.+.+....+.|+++|.
T Consensus        82 g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~p~m~~~~~~g~iv~isS  143 (275)
T PRK05876         82 GHVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQGTGGHVVFTAS  143 (275)
T ss_pred             CCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCC
Confidence            3579999999864211   12222   23455654444    44444444443456666654

>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins

Probab=97.40  E-value=0.001  Score=55.44  Aligned_cols=104  Identities=25%  Similarity=0.267  Sum_probs=56.9

Q ss_pred             CCCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcC
Q 018512           39 GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA  118 (354)
Q Consensus        39 ~~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~a  118 (354)
                      ....+||.|||+ |.||.+++..|...++  +|.-+-... .....++.+..  +....    .++.+.+++||++|++.
T Consensus         7 ~~~~l~I~iIGa-GrVG~~La~aL~~ag~--~v~~v~srs-~~sa~~a~~~~--~~~~~----~~~~~~~~~aDlv~iav   76 (127)
T PF10727_consen    7 QAARLKIGIIGA-GRVGTALARALARAGH--EVVGVYSRS-PASAERAAAFI--GAGAI----LDLEEILRDADLVFIAV   76 (127)
T ss_dssp             -----EEEEECT-SCCCCHHHHHHHHTTS--EEEEESSCH-H-HHHHHHC----TT---------TTGGGCC-SEEEE-S
T ss_pred             CCCccEEEEECC-CHHHHHHHHHHHHCCC--eEEEEEeCC-ccccccccccc--ccccc----cccccccccCCEEEEEe
Confidence            445679999999 9999999999999997  666554432 22223334321  11111    23457789999999984


Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHHHHhhh--C-CCeEEEEec--CCCCCchHH
Q 018512          119 GVPRKPGMTRDDLFNINAGIVRTLCEGIAKC--C-PNATVNLIS--NPVNSTVPI  168 (354)
Q Consensus       119 g~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~--~-p~a~viv~t--NPv~~~~~~  168 (354)
                      .         +|       .+.++++++..+  . |+.+|+=.|  -+++++.++
T Consensus        77 p---------Dd-------aI~~va~~La~~~~~~~g~iVvHtSGa~~~~vL~p~  115 (127)
T PF10727_consen   77 P---------DD-------AIAEVAEQLAQYGAWRPGQIVVHTSGALGSDVLAPA  115 (127)
T ss_dssp             ----------CC-------HHHHHHHHHHCC--S-TT-EEEES-SS--GGGGHHH
T ss_pred             c---------hH-------HHHHHHHHHHHhccCCCCcEEEECCCCChHHhhhhH
Confidence            2         11       466778888776  2 444433332  566777653

This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.

>PRK07576 short chain dehydrogenase; Provisional

Probab=97.39  E-value=0.0023  Score=59.42  Aligned_cols=119  Identities=16%  Similarity=0.177  Sum_probs=66.8

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc--hhHHHHHhcCCCCCeEEEE--eCCCcHHhhh-------CC
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGF--LGQPQLENAL-------TG  110 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~--~g~~~dl~~~~~~~~v~~~--~~~~d~~~al-------~~  110 (354)
                      ..+|.|+||+|.+|..++..|+..|.  .|+++|++..  .....++............  ....++..++       ..
T Consensus         9 ~k~ilItGasggIG~~la~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~~~   86 (264)
T PRK07576          9 GKNVVVVGGTSGINLGIAQAFARAGA--NVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRDYAAVEAAFAQIADEFGP   86 (264)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            45899999999999999999998887  8999998752  2222333322111111111  1111222222       35


Q ss_pred             CcEEEEcCCCCCCC---CCCHH---HHHHHHHHHHHHHHHHHhhh--CCCeEEEEecCCC
Q 018512          111 MDLVIIPAGVPRKP---GMTRD---DLFNINAGIVRTLCEGIAKC--CPNATVNLISNPV  162 (354)
Q Consensus       111 aDvVIi~ag~~~~~---g~~r~---d~~~~n~~~~~~i~~~i~~~--~p~a~viv~tNPv  162 (354)
                      .|+||+.+|.....   ..+..   ..+..|+.....+.+.+...  .+++.|+++|.+.
T Consensus        87 iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~~g~iv~iss~~  146 (264)
T PRK07576         87 IDVLVSGAAGNFPAPAAGMSANGFKTVVDIDLLGTFNVLKAAYPLLRRPGASIIQISAPQ  146 (264)
T ss_pred             CCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCEEEEECChh
Confidence            79999998753211   12222   23456666555555554432  1346677776543

>PRK06482 short chain dehydrogenase; Provisional

Probab=97.37  E-value=0.0043  Score=57.81  Aligned_cols=111  Identities=13%  Similarity=0.051  Sum_probs=64.2

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEe-CCCc---HHhh-------hCCC
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFL-GQPQ---LENA-------LTGM  111 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~-~~~d---~~~a-------l~~a  111 (354)
                      ++|.|+||+|++|+.++..|+..|.  .|++++++...  ..++.... ...+..+. +-+|   +.++       +.+.
T Consensus         3 k~vlVtGasg~IG~~la~~L~~~g~--~v~~~~r~~~~--~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   77 (276)
T PRK06482          3 KTWFITGASSGFGRGMTERLLARGD--RVAATVRRPDA--LDDLKARY-GDRLWVLQLDVTDSAAVRAVVDRAFAALGRI   77 (276)
T ss_pred             CEEEEecCCCHHHHHHHHHHHHCCC--EEEEEeCCHHH--HHHHHHhc-cCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            4799999999999999999999887  88888886411  11121110 01111111 1122   1222       3457


Q ss_pred             cEEEEcCCCCCCCC---CCH---HHHHHHHHHHHHHHHHHH----hhhCCCeEEEEec
Q 018512          112 DLVIIPAGVPRKPG---MTR---DDLFNINAGIVRTLCEGI----AKCCPNATVNLIS  159 (354)
Q Consensus       112 DvVIi~ag~~~~~g---~~r---~d~~~~n~~~~~~i~~~i----~~~~p~a~viv~t  159 (354)
                      |+||+++|......   .+.   ...+..|+.....+.+.+    ++.+. +.++++|
T Consensus        78 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~-~~iv~~s  134 (276)
T PRK06482         78 DVVVSNAGYGLFGAAEELSDAQIRRQIDTNLIGSIQVIRAALPHLRRQGG-GRIVQVS  134 (276)
T ss_pred             CEEEECCCCCCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC-CEEEEEc
Confidence            99999998653221   112   234556777777777775    43333 4455554

>PRK07806 short chain dehydrogenase; Provisional

Probab=97.37  E-value=0.0013  Score=60.04  Aligned_cols=114  Identities=17%  Similarity=0.219  Sum_probs=66.1

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc---hhHHHHHhcCCCCCeEEEEe-CCCc---HHhhh------
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT---PGVTADISHMDTGAVVRGFL-GQPQ---LENAL------  108 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~---~g~~~dl~~~~~~~~v~~~~-~~~d---~~~al------  108 (354)
                      .++|.|+||+|++|.+++..|+..|.  +|++++++..   .....++....  ..+..+. +-++   ...++      
T Consensus         6 ~k~vlItGasggiG~~l~~~l~~~G~--~V~~~~r~~~~~~~~~~~~l~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~   81 (248)
T PRK07806          6 GKTALVTGSSRGIGADTAKILAGAGA--HVVVNYRQKAPRANKVVAEIEAAG--GRASAVGADLTDEESVAALMDTAREE   81 (248)
T ss_pred             CcEEEEECCCCcHHHHHHHHHHHCCC--EEEEEeCCchHhHHHHHHHHHhcC--CceEEEEcCCCCHHHHHHHHHHHHHh
Confidence            35899999999999999999998887  8888887641   12222333221  1121111 1122   22222      


Q ss_pred             -CCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEec
Q 018512          109 -TGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLIS  159 (354)
Q Consensus       109 -~~aDvVIi~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~-p~a~viv~t  159 (354)
                       .+.|+||+.+|..........+.+..|+.....+++.+.++. ..+.++++|
T Consensus        82 ~~~~d~vi~~ag~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~iv~is  134 (248)
T PRK07806         82 FGGLDALVLNASGGMESGMDEDYAMRLNRDAQRNLARAALPLMPAGSRVVFVT  134 (248)
T ss_pred             CCCCcEEEECCCCCCCCCCCcceeeEeeeHHHHHHHHHHHhhccCCceEEEEe
Confidence             368999998875422222222334556666666777776654 245555554

>PLN00141 Tic62-NAD(P)-related group II protein; Provisional

Probab=97.37  E-value=0.0013  Score=60.71  Aligned_cols=114  Identities=17%  Similarity=0.097  Sum_probs=66.0

Q ss_pred             CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCe-EEE-EeC-CCcHHhhh-CCCcEEEE
Q 018512           41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAV-VRG-FLG-QPQLENAL-TGMDLVII  116 (354)
Q Consensus        41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~-v~~-~~~-~~d~~~al-~~aDvVIi  116 (354)
                      .++||+|+||+|++|+.++..|+..++  +|+++.++....... +.... ... +.. ... ..++.+++ .++|+||+
T Consensus        16 ~~~~ilItGasG~iG~~l~~~L~~~g~--~V~~~~R~~~~~~~~-~~~~~-~~~~~~~Dl~d~~~~l~~~~~~~~d~vi~   91 (251)
T PLN00141         16 KTKTVFVAGATGRTGKRIVEQLLAKGF--AVKAGVRDVDKAKTS-LPQDP-SLQIVRADVTEGSDKLVEAIGDDSDAVIC   91 (251)
T ss_pred             cCCeEEEECCCcHHHHHHHHHHHhCCC--EEEEEecCHHHHHHh-cccCC-ceEEEEeeCCCCHHHHHHHhhcCCCEEEE
Confidence            357999999999999999999998887  788777654211111 11110 111 111 111 12344566 68999999


Q ss_pred             cCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecC
Q 018512          117 PAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISN  160 (354)
Q Consensus       117 ~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tN  160 (354)
                      ++|.....+.  .+.+..|......+++.+.+....-+|++.|.
T Consensus        92 ~~g~~~~~~~--~~~~~~n~~~~~~ll~a~~~~~~~~iV~iSS~  133 (251)
T PLN00141         92 ATGFRRSFDP--FAPWKVDNFGTVNLVEACRKAGVTRFILVSSI  133 (251)
T ss_pred             CCCCCcCCCC--CCceeeehHHHHHHHHHHHHcCCCEEEEEccc
Confidence            8775422111  11123455556777777776655544444444

>PRK10538 malonic semialdehyde reductase; Provisional

Probab=97.37  E-value=0.0023  Score=58.65  Aligned_cols=34  Identities=15%  Similarity=0.123  Sum_probs=31.3

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   78 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~   78 (354)
                      |+|.|+||+|.+|..++..|+..|.  +|+++|+++
T Consensus         1 ~~vlItGasg~iG~~la~~l~~~G~--~V~~~~r~~   34 (248)
T PRK10538          1 MIVLVTGATAGFGECITRRFIQQGH--KVIATGRRQ   34 (248)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCC--EEEEEECCH
Confidence            6899999999999999999999887  899999875

>PRK12827 short chain dehydrogenase; Provisional

Probab=97.36  E-value=0.0063  Score=55.27  Aligned_cols=102  Identities=20%  Similarity=0.329  Sum_probs=61.5

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chh----HHHHHhcCCCCCeEEEEe-CCCc---HHhhh---
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPG----VTADISHMDTGAVVRGFL-GQPQ---LENAL---  108 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g----~~~dl~~~~~~~~v~~~~-~~~d---~~~al---  108 (354)
                      .++|.|+||+|.+|+.++..|+..|.  ++++++...  ...    ...++....  ..+..+. +-.+   +++++   
T Consensus         6 ~~~ilItGasg~iG~~la~~l~~~g~--~v~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~~~~~~~~~   81 (249)
T PRK12827          6 SRRVLITGGSGGLGRAIAVRLAADGA--DVIVLDIHPMRGRAEADAVAAGIEAAG--GKALGLAFDVRDFAATRAALDAG   81 (249)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCC--eEEEEcCcccccHHHHHHHHHHHHhcC--CcEEEEEccCCCHHHHHHHHHHH
Confidence            46899999999999999999999887  889988643  111    112222211  1122211 1112   22222   


Q ss_pred             ----CCCcEEEEcCCCCCCC---CCCH---HHHHHHHHHHHHHHHHHHh
Q 018512          109 ----TGMDLVIIPAGVPRKP---GMTR---DDLFNINAGIVRTLCEGIA  147 (354)
Q Consensus       109 ----~~aDvVIi~ag~~~~~---g~~r---~d~~~~n~~~~~~i~~~i~  147 (354)
                          ...|.||+++|.....   ..+.   ...+..|......+++.+.
T Consensus        82 ~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~  130 (249)
T PRK12827         82 VEEFGRLDILVNNAGIATDAAFAELSIEEWDDVIDVNLDGFFNVTQAAL  130 (249)
T ss_pred             HHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHH
Confidence                4689999999865321   1122   2345678777777777766

>PRK07417 arogenate dehydrogenase; Reviewed

Probab=97.35  E-value=0.001  Score=62.78  Aligned_cols=65  Identities=22%  Similarity=0.250  Sum_probs=45.2

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcC
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA  118 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~a  118 (354)
                      |||+|||. |.+|..++..|...|+  +|.++|+++..  ...+.....   +..  .+++. +++++||+||++.
T Consensus         1 m~I~IIG~-G~mG~sla~~L~~~g~--~V~~~d~~~~~--~~~a~~~g~---~~~--~~~~~-~~~~~aDlVilav   65 (279)
T PRK07417          1 MKIGIVGL-GLIGGSLGLDLRSLGH--TVYGVSRREST--CERAIERGL---VDE--ASTDL-SLLKDCDLVILAL   65 (279)
T ss_pred             CeEEEEee-cHHHHHHHHHHHHCCC--EEEEEECCHHH--HHHHHHCCC---ccc--ccCCH-hHhcCCCEEEEcC
Confidence            68999998 9999999999998887  89999987521  111111111   111  12343 5689999999984

>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.35  E-value=0.0052  Score=55.82  Aligned_cols=116  Identities=17%  Similarity=0.235  Sum_probs=65.5

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc--hhHHHHHhcCCCCCeEEEEeC-CC---cHHhhh-------
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFLG-QP---QLENAL-------  108 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~--~g~~~dl~~~~~~~~v~~~~~-~~---d~~~al-------  108 (354)
                      .+++.|+||+|.+|..++..|+..|.  +|++++++..  .....++....  ..+..+.. -+   ++.+++       
T Consensus         7 ~~~vlVtG~sg~iG~~l~~~L~~~G~--~Vi~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~   82 (239)
T PRK07666          7 GKNALITGAGRGIGRAVAIALAKEGV--NVGLLARTEENLKAVAEEVEAYG--VKVVIATADVSDYEEVTAAIEQLKNEL   82 (239)
T ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHHhC--CeEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            35899999999999999999999887  8999998752  22223333221  22222211 11   222333       


Q ss_pred             CCCcEEEEcCCCCCCC---CCCH---HHHHHHHHHHHHHHHHHHhhh---CCCeEEEEecCC
Q 018512          109 TGMDLVIIPAGVPRKP---GMTR---DDLFNINAGIVRTLCEGIAKC---CPNATVNLISNP  161 (354)
Q Consensus       109 ~~aDvVIi~ag~~~~~---g~~r---~d~~~~n~~~~~~i~~~i~~~---~p~a~viv~tNP  161 (354)
                      .+.|+||+++|.....   ..+.   ...+..|+.....+.+.+..+   ...+.++++|..
T Consensus        83 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~  144 (239)
T PRK07666         83 GSIDILINNAGISKFGKFLELDPAEWEKIIQVNLMGVYYATRAVLPSMIERQSGDIINISST  144 (239)
T ss_pred             CCccEEEEcCccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEEcch
Confidence            3799999998864321   1122   233455665444444444332   123445555543

>PRK07069 short chain dehydrogenase; Validated

Probab=97.35  E-value=0.0099  Score=54.17  Aligned_cols=114  Identities=23%  Similarity=0.291  Sum_probs=66.9

Q ss_pred             eEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecC-C--chhHHHHHhcCCCCCeE---EE-EeCCCcHH-------hhhC
Q 018512           44 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVV-N--TPGVTADISHMDTGAVV---RG-FLGQPQLE-------NALT  109 (354)
Q Consensus        44 kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~-~--~~g~~~dl~~~~~~~~v---~~-~~~~~d~~-------~al~  109 (354)
                      ||+|+||+|.+|.+++..|+..|.  +|++.|++ .  ......++........+   .. +.....+.       +.+.
T Consensus         1 ~ilVtG~~~~iG~~~a~~l~~~G~--~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   78 (251)
T PRK07069          1 RAFITGAAGGLGRAIARRMAEQGA--KVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQAADAMG   78 (251)
T ss_pred             CEEEECCCChHHHHHHHHHHHCCC--EEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHHHHHcC
Confidence            589999999999999999999887  89999987 3  22222333322111111   11 11111111       2235


Q ss_pred             CCcEEEEcCCCCCCC---CCCH---HHHHHHHHH----HHHHHHHHHhhhCCCeEEEEecC
Q 018512          110 GMDLVIIPAGVPRKP---GMTR---DDLFNINAG----IVRTLCEGIAKCCPNATVNLISN  160 (354)
Q Consensus       110 ~aDvVIi~ag~~~~~---g~~r---~d~~~~n~~----~~~~i~~~i~~~~p~a~viv~tN  160 (354)
                      ..|+||+.+|.....   ..+.   ...+..|+.    ..+.+.+.+++... +.|+++|.
T Consensus        79 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~-~~ii~~ss  138 (251)
T PRK07069         79 GLSVLVNNAGVGSFGAIEQIELDEWRRVMAINVESIFLGCKHALPYLRASQP-ASIVNISS  138 (251)
T ss_pred             CccEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCC-cEEEEecC
Confidence            689999999865321   1122   233456665    77788888876544 44555553

>PRK06172 short chain dehydrogenase; Provisional

Probab=97.34  E-value=0.0031  Score=57.86  Aligned_cols=155  Identities=12%  Similarity=0.075  Sum_probs=82.7

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCCCCeEEEEe-CCC---cHHhhhC------
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQP---QLENALT------  109 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~~~~v~~~~-~~~---d~~~al~------  109 (354)
                      .++|+|+||+|.+|..++..|+..|.  +|++++++.  ......++....  ..+..+. +-+   ++.++++      
T Consensus         7 ~k~ilItGas~~iG~~ia~~l~~~G~--~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~i~~~~~~~~~~~   82 (253)
T PRK06172          7 GKVALVTGGAAGIGRATALAFAREGA--KVVVADRDAAGGEETVALIREAG--GEALFVACDVTRDAEVKALVEQTIAAY   82 (253)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHHHHhcC--CceEEEEcCCCCHHHHHHHHHHHHHHh
Confidence            35899999999999999999998887  899999876  222233343322  1222211 111   2223333      


Q ss_pred             -CCcEEEEcCCCCCCC----CCCHH---HHHHHHHHHHHHHH----HHHhhhCCCeEEEEecCCCCCchHHHHHHHHHhC
Q 018512          110 -GMDLVIIPAGVPRKP----GMTRD---DLFNINAGIVRTLC----EGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAG  177 (354)
Q Consensus       110 -~aDvVIi~ag~~~~~----g~~r~---d~~~~n~~~~~~i~----~~i~~~~p~a~viv~tNPv~~~~~~~~~~~~~~~  177 (354)
                       ..|+||+.+|.....    ..+..   +.+.-|+.....+.    +.+.+. ..+.++++|......            
T Consensus        83 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~ii~~sS~~~~~------------  149 (253)
T PRK06172         83 GRLDYAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWLCMKYQIPLMLAQ-GGGAIVNTASVAGLG------------  149 (253)
T ss_pred             CCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCcEEEEECchhhcc------------
Confidence             459999999864321    12222   23455655554433    344333 234556565422111            


Q ss_pred             CCCCCCEEEeccchHHHHHHHHHHHhCCCCCCCcceEE
Q 018512          178 TYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVV  215 (354)
Q Consensus       178 ~~p~~kviG~t~ld~~r~~~~la~~l~v~~~~v~~~v~  215 (354)
                      +.+..-.++.+......+.+.++..+.  +..+++..+
T Consensus       150 ~~~~~~~Y~~sKaa~~~~~~~la~e~~--~~~i~v~~i  185 (253)
T PRK06172        150 AAPKMSIYAASKHAVIGLTKSAAIEYA--KKGIRVNAV  185 (253)
T ss_pred             CCCCCchhHHHHHHHHHHHHHHHHHhc--ccCeEEEEE
Confidence            233223344443333456666777663  445555444

>PRK09135 pteridine reductase; Provisional

Probab=97.34  E-value=0.0051  Score=55.87  Aligned_cols=147  Identities=15%  Similarity=0.112  Sum_probs=81.6

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC---chhHHHHHhcCCCCCeEEEEe-CCCc---HHhhh-------
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN---TPGVTADISHMDTGAVVRGFL-GQPQ---LENAL-------  108 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~---~~g~~~dl~~~~~~~~v~~~~-~~~d---~~~al-------  108 (354)
                      ++|.|+||+|++|++++..|+..|.  +|+++|+..   ......++.+... ..+..+. +-++   ...++       
T Consensus         7 ~~vlItGa~g~iG~~l~~~l~~~g~--~v~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~~~~~~~~~~~~~   83 (249)
T PRK09135          7 KVALITGGARRIGAAIARTLHAAGY--RVAIHYHRSAAEADALAAELNALRP-GSAAALQADLLDPDALPELVAACVAAF   83 (249)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCC--EEEEEcCCCHHHHHHHHHHHHhhcC-CceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            5899999999999999999999887  899999754   2222233333211 1111111 1122   22233       


Q ss_pred             CCCcEEEEcCCCCCC--CC-CC---HHHHHHHHHHHHHHHHHHHhhhC--CCeEEEEecCCCCCchHHHHHHHHHhCCCC
Q 018512          109 TGMDLVIIPAGVPRK--PG-MT---RDDLFNINAGIVRTLCEGIAKCC--PNATVNLISNPVNSTVPIAAEVFKKAGTYD  180 (354)
Q Consensus       109 ~~aDvVIi~ag~~~~--~g-~~---r~d~~~~n~~~~~~i~~~i~~~~--p~a~viv~tNPv~~~~~~~~~~~~~~~~~p  180 (354)
                      .+.|+||+++|....  .. .+   ..+.+..|+.....+.+.+.++-  ..+.++..+.    .        .....++
T Consensus        84 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~~~~~~----~--------~~~~~~~  151 (249)
T PRK09135         84 GRLDALVNNASSFYPTPLGSITEAQWDDLFASNLKAPFFLSQAAAPQLRKQRGAIVNITD----I--------HAERPLK  151 (249)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhchhHHHHHHHHHHHHhhCCeEEEEEeC----h--------hhcCCCC
Confidence            357999999885321  11 11   24456678877777777765432  1344443332    1        0111334


Q ss_pred             CCCEEEeccchHHHHHHHHHHHhC
Q 018512          181 PKKLLGVTMLDVVRANTFVAEVLG  204 (354)
Q Consensus       181 ~~kviG~t~ld~~r~~~~la~~l~  204 (354)
                      +.-.++.+......+-..+++.++
T Consensus       152 ~~~~Y~~sK~~~~~~~~~l~~~~~  175 (249)
T PRK09135        152 GYPVYCAAKAALEMLTRSLALELA  175 (249)
T ss_pred             CchhHHHHHHHHHHHHHHHHHHHC
Confidence            444555554444455566666653

>PRK07067 sorbitol dehydrogenase; Provisional

Probab=97.34  E-value=0.002  Score=59.32  Aligned_cols=145  Identities=17%  Similarity=0.151  Sum_probs=80.7

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc--hhHHHHHhcCCCCCeEEE-EeCCCcHHhh-------hCCCc
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRG-FLGQPQLENA-------LTGMD  112 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~--~g~~~dl~~~~~~~~v~~-~~~~~d~~~a-------l~~aD  112 (354)
                      .++.|+||+|.+|..++..|+..|.  +|+++|++..  .....++....  ..+.. .....+.+++       +...|
T Consensus         7 ~~vlItGas~~iG~~ia~~l~~~G~--~v~~~~r~~~~~~~~~~~~~~~~--~~~~~D~~~~~~~~~~~~~~~~~~~~id   82 (257)
T PRK07067          7 KVALLTGAASGIGEAVAERYLAEGA--RVVIADIKPARARLAALEIGPAA--IAVSLDVTRQDSIDRIVAAAVERFGGID   82 (257)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHcCC--EEEEEcCCHHHHHHHHHHhCCce--EEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence            4799999999999999999999988  8999998762  12222222110  01111 1111122222       24689


Q ss_pred             EEEEcCCCCCCC---CCC---HHHHHHHHHHHHHHHHHHHhhh----CCCeEEEEecCCCCCchHHHHHHHHHhCCCCCC
Q 018512          113 LVIIPAGVPRKP---GMT---RDDLFNINAGIVRTLCEGIAKC----CPNATVNLISNPVNSTVPIAAEVFKKAGTYDPK  182 (354)
Q Consensus       113 vVIi~ag~~~~~---g~~---r~d~~~~n~~~~~~i~~~i~~~----~p~a~viv~tNPv~~~~~~~~~~~~~~~~~p~~  182 (354)
                      ++|+++|.....   ..+   ....+..|+.....+.+.+.++    ...+.|+++|......            +.|+.
T Consensus        83 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~------------~~~~~  150 (257)
T PRK07067         83 ILFNNAALFDMAPILDISRDSYDRLFAVNVKGLFFLMQAVARHMVEQGRGGKIINMASQAGRR------------GEALV  150 (257)
T ss_pred             EEEECCCcCCCCCcccCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCCCcEEEEeCCHHhCC------------CCCCC
Confidence            999998864211   111   2334567776666666665433    2345666665432111            23333


Q ss_pred             CEEEeccchHHHHHHHHHHHh
Q 018512          183 KLLGVTMLDVVRANTFVAEVL  203 (354)
Q Consensus       183 kviG~t~ld~~r~~~~la~~l  203 (354)
                      -.++.+......+.+.++..+
T Consensus       151 ~~Y~~sK~a~~~~~~~la~e~  171 (257)
T PRK07067        151 SHYCATKAAVISYTQSAALAL  171 (257)
T ss_pred             chhhhhHHHHHHHHHHHHHHh
Confidence            445554433344566666655

>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase

Probab=97.33  E-value=0.01  Score=54.17  Aligned_cols=116  Identities=17%  Similarity=0.228  Sum_probs=66.6

Q ss_pred             CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEE-eCCCc---HH-------hhhC
Q 018512           41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGF-LGQPQ---LE-------NALT  109 (354)
Q Consensus        41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~-~~~~d---~~-------~al~  109 (354)
                      +.++|.|+||+|.+|.+++..|+..|.  +|++++++........+....  ..+..+ .+-++   +.       +.+.
T Consensus         4 ~~k~vlItGas~gIG~~ia~~l~~~G~--~vi~~~r~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~~   79 (248)
T TIGR01832         4 EGKVALVTGANTGLGQGIAVGLAEAGA--DIVGAGRSEPSETQQQVEALG--RRFLSLTADLSDIEAIKALVDSAVEEFG   79 (248)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC--EEEEEcCchHHHHHHHHHhcC--CceEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            346899999999999999999999987  899999865322222233221  112111 11112   21       2234


Q ss_pred             CCcEEEEcCCCCCCCC---CC---HHHHHHHHHHHHHHHHHHHh----hhCCCeEEEEecC
Q 018512          110 GMDLVIIPAGVPRKPG---MT---RDDLFNINAGIVRTLCEGIA----KCCPNATVNLISN  160 (354)
Q Consensus       110 ~aDvVIi~ag~~~~~g---~~---r~d~~~~n~~~~~~i~~~i~----~~~p~a~viv~tN  160 (354)
                      ..|++|+++|......   .+   ..+.+..|+.....+.+.+.    +....+.++++|.
T Consensus        80 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS  140 (248)
T TIGR01832        80 HIDILVNNAGIIRRADAEEFSEKDWDDVMNVNLKSVFFLTQAAAKHFLKQGRGGKIINIAS  140 (248)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEec
Confidence            6899999998643211   11   22345566655555555443    3333456666553

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.

>PRK05875 short chain dehydrogenase; Provisional

Probab=97.33  E-value=0.0053  Score=57.12  Aligned_cols=159  Identities=18%  Similarity=0.115  Sum_probs=85.2

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCCCCeEEEEe-CCCc---HHhhhC------
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQ---LENALT------  109 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~~~~v~~~~-~~~d---~~~al~------  109 (354)
                      .++|.|+||+|.+|+.++..|+..|.  +|++++++.  ......++........+..+. +-.+   ....++      
T Consensus         7 ~k~vlItGasg~IG~~la~~l~~~G~--~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   84 (276)
T PRK05875          7 DRTYLVTGGGSGIGKGVAAGLVAAGA--AVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAATAWH   84 (276)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC--eEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            46899999999999999999999988  899999875  222233333221111222211 1112   222333      


Q ss_pred             -CCcEEEEcCCCCCCC----CCCH---HHHHHHHHHHHHHHHHHHhhh---CCCeEEEEecCCCCCchHHHHHHHHHhCC
Q 018512          110 -GMDLVIIPAGVPRKP----GMTR---DDLFNINAGIVRTLCEGIAKC---CPNATVNLISNPVNSTVPIAAEVFKKAGT  178 (354)
Q Consensus       110 -~aDvVIi~ag~~~~~----g~~r---~d~~~~n~~~~~~i~~~i~~~---~p~a~viv~tNPv~~~~~~~~~~~~~~~~  178 (354)
                       ..|+||+++|.....    ..+.   .+.+..|+.....+.+.+.+.   ...+.++++|.....            .+
T Consensus        85 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~sS~~~~------------~~  152 (276)
T PRK05875         85 GRLHGVVHCAGGSETIGPITQIDSDAWRRTVDLNVNGTMYVLKHAARELVRGGGGSFVGISSIAAS------------NT  152 (276)
T ss_pred             CCCCEEEECCCcccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhc------------CC
Confidence             689999998854221    1122   233455666666665544333   234566666532110            11


Q ss_pred             CCCCCEEEeccchHHHHHHHHHHHhCCCCCCCcceEEe
Q 018512          179 YDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVVG  216 (354)
Q Consensus       179 ~p~~kviG~t~ld~~r~~~~la~~l~v~~~~v~~~v~G  216 (354)
                      .|..-.++.+......+.+.+++.++  +..+++.++.
T Consensus       153 ~~~~~~Y~~sK~a~~~~~~~~~~~~~--~~~i~v~~i~  188 (276)
T PRK05875        153 HRWFGAYGVTKSAVDHLMKLAADELG--PSWVRVNSIR  188 (276)
T ss_pred             CCCCcchHHHHHHHHHHHHHHHHHhc--ccCeEEEEEe
Confidence            22222344444444456666666654  3455555443

>PRK08278 short chain dehydrogenase; Provisional

Probab=97.33  E-value=0.0087  Score=55.87  Aligned_cols=160  Identities=16%  Similarity=0.182  Sum_probs=86.7

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc---------hhHHHHHhcCCCCCe-EEE-EeCCCcHHhhh--
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT---------PGVTADISHMDTGAV-VRG-FLGQPQLENAL--  108 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~---------~g~~~dl~~~~~~~~-v~~-~~~~~d~~~al--  108 (354)
                      .+++.|+||+|.+|..++..|+..|.  +|++++++..         +....++........ +.. .....+.+..+  
T Consensus         6 ~k~vlItGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~   83 (273)
T PRK08278          6 GKTLFITGASRGIGLAIALRAARDGA--NIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDVRDEDQVAAAVAK   83 (273)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCC--EEEEEecccccccchhhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHH
Confidence            35899999999999999999999887  8999998641         111222322111111 111 11111222223  


Q ss_pred             -----CCCcEEEEcCCCCCCC---CCCHH---HHHHHHHHHHHHHHHHHhhh---CCCeEEEEecCCCCCchHHHHHHHH
Q 018512          109 -----TGMDLVIIPAGVPRKP---GMTRD---DLFNINAGIVRTLCEGIAKC---CPNATVNLISNPVNSTVPIAAEVFK  174 (354)
Q Consensus       109 -----~~aDvVIi~ag~~~~~---g~~r~---d~~~~n~~~~~~i~~~i~~~---~p~a~viv~tNPv~~~~~~~~~~~~  174 (354)
                           ...|+||+++|.....   ..+..   ..+..|+.....+++.+..+   ...+.++++|.+....         
T Consensus        84 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~---------  154 (273)
T PRK08278         84 AVERFGGIDICVNNASAINLTGTEDTPMKRFDLMQQINVRGTFLVSQACLPHLKKSENPHILTLSPPLNLD---------  154 (273)
T ss_pred             HHHHhCCCCEEEECCCCcCCCCcccCCHHHHHHHHHHhchHHHHHHHHHHHHHHhcCCCEEEEECCchhcc---------
Confidence                 3689999999864211   12222   23445655555555554432   2346666666433211         


Q ss_pred             HhCCCCCCCEEEeccchHHHHHHHHHHHhCCCCCCCcceEE
Q 018512          175 KAGTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVV  215 (354)
Q Consensus       175 ~~~~~p~~kviG~t~ld~~r~~~~la~~l~v~~~~v~~~v~  215 (354)
                       ...++..-.++.+.....++...+++.++  +..|++..+
T Consensus       155 -~~~~~~~~~Y~~sK~a~~~~~~~la~el~--~~~I~v~~i  192 (273)
T PRK08278        155 -PKWFAPHTAYTMAKYGMSLCTLGLAEEFR--DDGIAVNAL  192 (273)
T ss_pred             -ccccCCcchhHHHHHHHHHHHHHHHHHhh--hcCcEEEEE
Confidence             01123334566665555667777777775  344554444

>PRK12828 short chain dehydrogenase; Provisional

Probab=97.32  E-value=0.0024  Score=57.56  Aligned_cols=117  Identities=15%  Similarity=0.135  Sum_probs=65.1

Q ss_pred             CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc--hhHHHHHhcCCCCCeEEE-EeCCCcHHhh-------hCC
Q 018512           41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRG-FLGQPQLENA-------LTG  110 (354)
Q Consensus        41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~--~g~~~dl~~~~~~~~v~~-~~~~~d~~~a-------l~~  110 (354)
                      +.++|+|+||+|.+|+.++..|+..|.  +|+++|++..  .....++..... ..+.. .....+++++       +..
T Consensus         6 ~~k~vlItGatg~iG~~la~~l~~~G~--~v~~~~r~~~~~~~~~~~~~~~~~-~~~~~D~~~~~~~~~~~~~~~~~~~~   82 (239)
T PRK12828          6 QGKVVAITGGFGGLGRATAAWLAARGA--RVALIGRGAAPLSQTLPGVPADAL-RIGGIDLVDPQAARRAVDEVNRQFGR   82 (239)
T ss_pred             CCCEEEEECCCCcHhHHHHHHHHHCCC--eEEEEeCChHhHHHHHHHHhhcCc-eEEEeecCCHHHHHHHHHHHHHHhCC
Confidence            346899999999999999999999887  8999999762  122233332211 11111 1111122222       236


Q ss_pred             CcEEEEcCCCCCCC---CCCH---HHHHHHHHHHHHHHHHHHhhh---CCCeEEEEecC
Q 018512          111 MDLVIIPAGVPRKP---GMTR---DDLFNINAGIVRTLCEGIAKC---CPNATVNLISN  160 (354)
Q Consensus       111 aDvVIi~ag~~~~~---g~~r---~d~~~~n~~~~~~i~~~i~~~---~p~a~viv~tN  160 (354)
                      .|+||+.+|.....   ..+.   .+.+..|......+++.+.+.   .+...++++|.
T Consensus        83 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS  141 (239)
T PRK12828         83 LDALVNIAGAFVWGTIADGDADTWDRMYGVNVKTTLNASKAALPALTASGGGRIVNIGA  141 (239)
T ss_pred             cCEEEECCcccCcCChhhCCHHHHHHHHHhhchhHHHHHHHHHHHHHhcCCCEEEEECc
Confidence            89999998754211   1122   223445655555555554322   23445555553

>PRK06124 gluconate 5-dehydrogenase; Provisional

Probab=97.31  E-value=0.0025  Score=58.56  Aligned_cols=120  Identities=13%  Similarity=0.103  Sum_probs=67.9

Q ss_pred             CCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCCCCe-EEE-EeCCCcHHhhh-------
Q 018512           40 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAV-VRG-FLGQPQLENAL-------  108 (354)
Q Consensus        40 ~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~~~~-v~~-~~~~~d~~~al-------  108 (354)
                      .+.++|.|+||+|.+|+.++..|+..|.  .|+++|+++  ......++........ +.. .....++..++       
T Consensus         9 ~~~k~ilItGas~~IG~~la~~l~~~G~--~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   86 (256)
T PRK06124          9 LAGQVALVTGSARGLGFEIARALAGAGA--HVLVNGRNAATLEAAVAALRAAGGAAEALAFDIADEEAVAAAFARIDAEH   86 (256)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHcCC--eEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhc
Confidence            4456899999999999999999998887  899999975  2223333432211111 111 11111222222       


Q ss_pred             CCCcEEEEcCCCCCCC---CCCH---HHHHHHHHHHHHHHHHHHhhh---CCCeEEEEecCC
Q 018512          109 TGMDLVIIPAGVPRKP---GMTR---DDLFNINAGIVRTLCEGIAKC---CPNATVNLISNP  161 (354)
Q Consensus       109 ~~aDvVIi~ag~~~~~---g~~r---~d~~~~n~~~~~~i~~~i~~~---~p~a~viv~tNP  161 (354)
                      ...|.||+++|.....   ..+.   ...+..|+.....+++.+.+.   ...+.++++|..
T Consensus        87 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~ss~  148 (256)
T PRK06124         87 GRLDILVNNVGARDRRPLAELDDAAIRALLETDLVAPILLSRLAAQRMKRQGYGRIIAITSI  148 (256)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEeec
Confidence            3458999998864321   1122   234566766555555444332   234556666654

>TIGR01746 Thioester-redct thioester reductase domain

Probab=97.30  E-value=0.003  Score=60.63  Aligned_cols=113  Identities=12%  Similarity=0.031  Sum_probs=71.3

Q ss_pred             eEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhH-----HHHHhcCC-----CC-CeEEEEeCC----------C
Q 018512           44 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGV-----TADISHMD-----TG-AVVRGFLGQ----------P  102 (354)
Q Consensus        44 kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~-----~~dl~~~~-----~~-~~v~~~~~~----------~  102 (354)
                      +|.|+||+|++|++++..|+..+...+|+++.+......     ...+....     .. ..+..+.+.          .
T Consensus         1 ~vlvtGatG~lG~~l~~~L~~~g~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~gl~~~   80 (367)
T TIGR01746         1 TVLLTGATGFLGAYLLEELLRRSTQAKVICLVRAASEEHAMERLREALRSYRLWQEDLARERIEVVAGDLSEPRLGLSDA   80 (367)
T ss_pred             CEEEeccchHHHHHHHHHHHhCCCCCEEEEEEccCCHHHHHHHHHHHHHHhCCCCchhhhCCEEEEeCCcCcccCCcCHH
Confidence            589999999999999999998875447888887652111     11111100     00 223332111          1


Q ss_pred             cHHhhhCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEE
Q 018512          103 QLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNL  157 (354)
Q Consensus       103 d~~~al~~aDvVIi~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv  157 (354)
                      ++.+..+++|+||++|+.... .....++...|+....++++.+.+...+.++.+
T Consensus        81 ~~~~~~~~~d~vih~a~~~~~-~~~~~~~~~~nv~g~~~ll~~a~~~~~~~~v~i  134 (367)
T TIGR01746        81 EWERLAENVDTIVHNGALVNW-VYPYSELRAANVLGTREVLRLAASGRAKPLHYV  134 (367)
T ss_pred             HHHHHHhhCCEEEeCCcEecc-CCcHHHHhhhhhHHHHHHHHHHhhCCCceEEEE
Confidence            234556899999999875432 223455667899999999998887665544443

It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.

>PLN02996 fatty acyl-CoA reductase

Probab=97.30  E-value=0.005  Score=62.92  Aligned_cols=117  Identities=15%  Similarity=0.115  Sum_probs=72.0

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhC-CCCcEEEEEecCCc--hh--H-HHHHhcC----------C--C----CCeEEEEe
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKIN-PLVSVLHLYDVVNT--PG--V-TADISHM----------D--T----GAVVRGFL   99 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~-~~~~ei~L~D~~~~--~g--~-~~dl~~~----------~--~----~~~v~~~~   99 (354)
                      .+.|.|+||+|++|+.++..|+.. +...+|+++.+...  ..  . ..++...          .  .    ..++..+.
T Consensus        11 ~k~VlvTGaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~~kv~~i~   90 (491)
T PLN02996         11 NKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLISEKVTPVP   90 (491)
T ss_pred             CCeEEEeCCCcHHHHHHHHHHHhhCCCCCEEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhhhhcCEEEEe
Confidence            358999999999999999987764 34557777776541  11  0 0111110          0  0    02233322


Q ss_pred             CC----------Cc-HHhhhCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEec
Q 018512          100 GQ----------PQ-LENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLIS  159 (354)
Q Consensus       100 ~~----------~d-~~~al~~aDvVIi~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~-p~a~viv~t  159 (354)
                      +.          .+ +++.++++|+||++|+...- .....+....|+....++++.+++.. .+.+|.+.|
T Consensus        91 GDl~~~~LGLs~~~~~~~l~~~vD~ViH~AA~v~~-~~~~~~~~~~Nv~gt~~ll~~a~~~~~~k~~V~vST  161 (491)
T PLN02996         91 GDISYDDLGVKDSNLREEMWKEIDIVVNLAATTNF-DERYDVALGINTLGALNVLNFAKKCVKVKMLLHVST  161 (491)
T ss_pred             cccCCcCCCCChHHHHHHHHhCCCEEEECccccCC-cCCHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEee
Confidence            11          11 34567899999999876532 23445667889999999999888753 344555444

>PRK07832 short chain dehydrogenase; Provisional

Probab=97.30  E-value=0.019  Score=53.45  Aligned_cols=118  Identities=19%  Similarity=0.176  Sum_probs=66.2

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCCCCeEEEEeCCCcH----------HhhhCC
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLGQPQL----------ENALTG  110 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~~~~v~~~~~~~d~----------~~al~~  110 (354)
                      +++.|+||+|.+|..++..|+..|.  .|++++++.  ......++.............+-.+.          .+.+..
T Consensus         1 k~vlItGas~giG~~la~~la~~G~--~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   78 (272)
T PRK07832          1 KRCFVTGAASGIGRATALRLAAQGA--ELFLTDRDADGLAQTVADARALGGTVPEHRALDISDYDAVAAFAADIHAAHGS   78 (272)
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCCHHHHHHHHHHHHHhcCC
Confidence            4799999999999999999998887  799999875  22223333322111111000011121          122356


Q ss_pred             CcEEEEcCCCCCCC---CCCH---HHHHHHHHHHHHHHHHHH----hhhCCCeEEEEecCCC
Q 018512          111 MDLVIIPAGVPRKP---GMTR---DDLFNINAGIVRTLCEGI----AKCCPNATVNLISNPV  162 (354)
Q Consensus       111 aDvVIi~ag~~~~~---g~~r---~d~~~~n~~~~~~i~~~i----~~~~p~a~viv~tNPv  162 (354)
                      .|+||+++|.....   ..+.   ...+..|+.....+.+.+    .+....+.|+++|...
T Consensus        79 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~  140 (272)
T PRK07832         79 MDVVMNIAGISAWGTVDRLTHEQWRRMVDVNLMGPIHVIETFVPPMVAAGRGGHLVNVSSAA  140 (272)
T ss_pred             CCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEcccc
Confidence            89999999864221   1222   234556666555555544    3333345666666443

>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

Probab=97.29  E-value=0.0037  Score=57.03  Aligned_cols=115  Identities=17%  Similarity=0.211  Sum_probs=65.6

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCCCCeEEEEe-CCCc---HHhhh-------
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQ---LENAL-------  108 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~~~~v~~~~-~~~d---~~~al-------  108 (354)
                      .++|.|+||+|++|+.++..|+..+.  +|+++|++.  ......++....  ..+..+. +-.+   .++++       
T Consensus         3 ~~~ilItGas~~iG~~la~~l~~~g~--~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~d~~~~~~~~~~~~~~~~~~   78 (250)
T TIGR03206         3 DKTAIVTGGGGGIGGATCRRFAEEGA--KVAVFDLNREAAEKVAADIRAKG--GNAQAFACDITDRDSVDTAVAAAEQAL   78 (250)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCC--EEEEecCCHHHHHHHHHHHHhcC--CcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            45899999999999999999999887  899999876  222223333321  1122111 1112   22222       


Q ss_pred             CCCcEEEEcCCCCCCCC---CCH---HHHHHHHHHHHHHHHHHHhhh---CCCeEEEEecC
Q 018512          109 TGMDLVIIPAGVPRKPG---MTR---DDLFNINAGIVRTLCEGIAKC---CPNATVNLISN  160 (354)
Q Consensus       109 ~~aDvVIi~ag~~~~~g---~~r---~d~~~~n~~~~~~i~~~i~~~---~p~a~viv~tN  160 (354)
                      ...|+||+.+|......   .+.   ...+..|+.....+.+.+.+.   .+.+.+++++.
T Consensus        79 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~iss  139 (250)
T TIGR03206        79 GPVDVLVNNAGWDKFGPFTKTEPPLWERLIAINLTGALHMHHAVLPGMVERGAGRIVNIAS  139 (250)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEECc
Confidence            35899999988542211   122   223566766666555554321   22344555543

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.

>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional

Probab=97.29  E-value=0.0071  Score=55.27  Aligned_cols=118  Identities=17%  Similarity=0.204  Sum_probs=67.6

Q ss_pred             CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCC-CCeEEEEeCC-Cc----------HHh
Q 018512           41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDT-GAVVRGFLGQ-PQ----------LEN  106 (354)
Q Consensus        41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~-~~~v~~~~~~-~d----------~~~  106 (354)
                      +.++|.|+||+|++|.+++..|+..|.  +|+++|++.  ......++.+... ...+.....+ .+          +.+
T Consensus        11 ~~k~vlItG~~g~iG~~la~~l~~~G~--~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~   88 (247)
T PRK08945         11 KDRIILVTGAGDGIGREAALTYARHGA--TVILLGRTEEKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQLADTIEE   88 (247)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC--cEEEEeCCHHHHHHHHHHHHhcCCCCceEEEecccCCCHHHHHHHHHHHHH
Confidence            456899999999999999999998887  899999976  2233344443321 1111111100 01          223


Q ss_pred             hhCCCcEEEEcCCCCCCC----CCCH---HHHHHHHHHHHHHHHHHHhhh---CCCeEEEEecC
Q 018512          107 ALTGMDLVIIPAGVPRKP----GMTR---DDLFNINAGIVRTLCEGIAKC---CPNATVNLISN  160 (354)
Q Consensus       107 al~~aDvVIi~ag~~~~~----g~~r---~d~~~~n~~~~~~i~~~i~~~---~p~a~viv~tN  160 (354)
                      .+...|+||+.||.....    ..+.   ...+..|+.....+.+.+..+   .+.+.|++.|.
T Consensus        89 ~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~l~~~~~~~iv~~ss  152 (247)
T PRK08945         89 QFGRLDGVLHNAGLLGELGPMEQQDPEVWQDVMQVNVNATFMLTQALLPLLLKSPAASLVFTSS  152 (247)
T ss_pred             HhCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEEcc
Confidence            345689999998863221    2222   234556666544444444322   23455555554

>PRK08265 short chain dehydrogenase; Provisional

Probab=97.28  E-value=0.0069  Score=56.07  Aligned_cols=112  Identities=15%  Similarity=0.148  Sum_probs=63.8

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc--hhHHHHHhcCCCCCeEEEE----eCCCcHHhh-------h
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGF----LGQPQLENA-------L  108 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~--~g~~~dl~~~~~~~~v~~~----~~~~d~~~a-------l  108 (354)
                      .+++.|+||+|.+|..++..|+..|.  +|++.|++..  .....++.     ..+..+    ....+.+++       +
T Consensus         6 ~k~vlItGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~-----~~~~~~~~Dl~~~~~~~~~~~~~~~~~   78 (261)
T PRK08265          6 GKVAIVTGGATLIGAAVARALVAAGA--RVAIVDIDADNGAAVAASLG-----ERARFIATDITDDAAIERAVATVVARF   78 (261)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHhC-----CeeEEEEecCCCHHHHHHHHHHHHHHh
Confidence            45899999999999999999999988  8999998752  11122221     111111    111122222       2


Q ss_pred             CCCcEEEEcCCCCCCC--CCCH---HHHHHHHHHHHHHHHHHHhhh--CCCeEEEEecC
Q 018512          109 TGMDLVIIPAGVPRKP--GMTR---DDLFNINAGIVRTLCEGIAKC--CPNATVNLISN  160 (354)
Q Consensus       109 ~~aDvVIi~ag~~~~~--g~~r---~d~~~~n~~~~~~i~~~i~~~--~p~a~viv~tN  160 (354)
                      ...|++|+.+|.....  ..+.   ...+..|+.....+.+.+..+  .+.+.|+++|.
T Consensus        79 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~ii~isS  137 (261)
T PRK08265         79 GRVDILVNLACTYLDDGLASSRADWLAALDVNLVSAAMLAQAAHPHLARGGGAIVNFTS  137 (261)
T ss_pred             CCCCEEEECCCCCCCCcCcCCHHHHHHHHhHhhHHHHHHHHHHHHHHhcCCcEEEEECc
Confidence            4679999998864322  1222   223445655444444443322  34566666653

>PRK06914 short chain dehydrogenase; Provisional

Probab=97.28  E-value=0.011  Score=55.07  Aligned_cols=114  Identities=11%  Similarity=0.101  Sum_probs=63.0

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc--hhHHHHHhcCCCCCeEEEEe-CCCcHH---------hhhCC
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFL-GQPQLE---------NALTG  110 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~--~g~~~dl~~~~~~~~v~~~~-~~~d~~---------~al~~  110 (354)
                      +.+.|+||+|.+|+.++..|+..|.  .|++++++..  .....++.+......+..+. +-+|.+         +.+..
T Consensus         4 k~~lItGasg~iG~~la~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~   81 (280)
T PRK06914          4 KIAIVTGASSGFGLLTTLELAKKGY--LVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHNFQLVLKEIGR   81 (280)
T ss_pred             CEEEEECCCchHHHHHHHHHHhCCC--EEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHHHHHHHHhcCC
Confidence            4689999999999999999999887  8999998652  22222222211111222211 112221         11245


Q ss_pred             CcEEEEcCCCCCCC---CCCH---HHHHHHHHHHHHHHHHH----HhhhCCCeEEEEec
Q 018512          111 MDLVIIPAGVPRKP---GMTR---DDLFNINAGIVRTLCEG----IAKCCPNATVNLIS  159 (354)
Q Consensus       111 aDvVIi~ag~~~~~---g~~r---~d~~~~n~~~~~~i~~~----i~~~~p~a~viv~t  159 (354)
                      .|+||+++|.....   +.+.   .+.+..|+.....+.+.    +++.... .++++|
T Consensus        82 id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~-~iv~vs  139 (280)
T PRK06914         82 IDLLVNNAGYANGGFVEEIPVEEYRKQFETNVFGAISVTQAVLPYMRKQKSG-KIINIS  139 (280)
T ss_pred             eeEEEECCcccccCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCC-EEEEEC
Confidence            79999998864321   1111   23345666655455444    4544333 344444

>PRK06181 short chain dehydrogenase; Provisional

Probab=97.26  E-value=0.0042  Score=57.28  Aligned_cols=114  Identities=17%  Similarity=0.182  Sum_probs=66.8

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc--hhHHHHHhcCCCCCeEEEEe-CCCc---HHhhh-------C
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFL-GQPQ---LENAL-------T  109 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~--~g~~~dl~~~~~~~~v~~~~-~~~d---~~~al-------~  109 (354)
                      ++|.|+||+|.+|+.++..|+..+.  +|+++|++..  +....++....  ..+..+. +-.|   +.+++       .
T Consensus         2 ~~vlVtGasg~iG~~la~~l~~~g~--~Vi~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   77 (263)
T PRK06181          2 KVVIITGASEGIGRALAVRLARAGA--QLVLAARNETRLASLAQELADHG--GEALVVPTDVSDAEACERLIEAAVARFG   77 (263)
T ss_pred             CEEEEecCCcHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcC--CcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            4799999999999999999998887  8999998752  22223343322  1222211 1122   12222       3


Q ss_pred             CCcEEEEcCCCCCCCC---C-CH---HHHHHHHHHHHHHHHHHHhhhC--CCeEEEEecC
Q 018512          110 GMDLVIIPAGVPRKPG---M-TR---DDLFNINAGIVRTLCEGIAKCC--PNATVNLISN  160 (354)
Q Consensus       110 ~aDvVIi~ag~~~~~g---~-~r---~d~~~~n~~~~~~i~~~i~~~~--p~a~viv~tN  160 (354)
                      +.|+||+++|......   . +.   ...+..|+.....+.+.+.++.  ..+.++++|.
T Consensus        78 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~iv~~sS  137 (263)
T PRK06181         78 GIDILVNNAGITMWSRFDELTDLSVFERVMRVNYLGAVYCTHAALPHLKASRGQIVVVSS  137 (263)
T ss_pred             CCCEEEECCCcccccchhccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCEEEEEec
Confidence            6899999988643211   1 21   2335667766666666654332  2345555554

>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

Probab=97.26  E-value=0.0035  Score=56.88  Aligned_cols=114  Identities=19%  Similarity=0.317  Sum_probs=64.1

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc--hhHHHHHhcCCCCCeEEEEeCCCc---HHh-------hhC
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFLGQPQ---LEN-------ALT  109 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~--~g~~~dl~~~~~~~~v~~~~~~~d---~~~-------al~  109 (354)
                      .+++.|+||+|.+|+.++..|+..+.  .|++.+.+..  .....++.   ........ +-.+   +++       .+.
T Consensus         6 ~~~vlItGa~g~iG~~la~~l~~~g~--~v~~~~~~~~~~~~~~~~~~---~~~~~~~~-D~~~~~~~~~~~~~~~~~~~   79 (245)
T PRK12936          6 GRKALVTGASGGIGEEIARLLHAQGA--IVGLHGTRVEKLEALAAELG---ERVKIFPA-NLSDRDEVKALGQKAEADLE   79 (245)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCC--EEEEEcCCHHHHHHHHHHhC---CceEEEEc-cCCCHHHHHHHHHHHHHHcC
Confidence            45899999999999999999999887  7888887642  21112221   11111111 1112   222       234


Q ss_pred             CCcEEEEcCCCCCCC---CCC---HHHHHHHHHHHHHHHHHHHhhh---CCCeEEEEecCC
Q 018512          110 GMDLVIIPAGVPRKP---GMT---RDDLFNINAGIVRTLCEGIAKC---CPNATVNLISNP  161 (354)
Q Consensus       110 ~aDvVIi~ag~~~~~---g~~---r~d~~~~n~~~~~~i~~~i~~~---~p~a~viv~tNP  161 (354)
                      ..|+||+++|.....   ..+   ....+..|+.....+++.+.+.   .+.+.++++|..
T Consensus        80 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~  140 (245)
T PRK12936         80 GVDILVNNAGITKDGLFVRMSDEDWDSVLEVNLTATFRLTRELTHPMMRRRYGRIINITSV  140 (245)
T ss_pred             CCCEEEECCCCCCCCccccCCHHHHHHHHhhccHHHHHHHHHHHHHHHHhCCCEEEEECCH
Confidence            689999999864321   111   2334556666655555544322   234556666643

>PRK12939 short chain dehydrogenase; Provisional

Probab=97.26  E-value=0.0046  Score=56.32  Aligned_cols=116  Identities=15%  Similarity=0.219  Sum_probs=67.9

Q ss_pred             CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc--hhHHHHHhcCCCCCeEEEEe-CCCc---HHhhh------
Q 018512           41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFL-GQPQ---LENAL------  108 (354)
Q Consensus        41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~--~g~~~dl~~~~~~~~v~~~~-~~~d---~~~al------  108 (354)
                      +.++|.|+||+|.+|+.++..|+..|.  +|+++++++.  .....++....  ..+..+. +-.+   +++.+      
T Consensus         6 ~~~~vlItGa~g~iG~~la~~l~~~G~--~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~~~   81 (250)
T PRK12939          6 AGKRALVTGAARGLGAAFAEALAEAGA--TVAFNDGLAAEARELAAALEAAG--GRAHAIAADLADPASVQRFFDAAAAA   81 (250)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHHHHhcC--CcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            346899999999999999999999887  8999988652  22233443221  1222211 1122   11222      


Q ss_pred             -CCCcEEEEcCCCCCCC---CCCH---HHHHHHHHHHHHHHHHHHhhh---CCCeEEEEecC
Q 018512          109 -TGMDLVIIPAGVPRKP---GMTR---DDLFNINAGIVRTLCEGIAKC---CPNATVNLISN  160 (354)
Q Consensus       109 -~~aDvVIi~ag~~~~~---g~~r---~d~~~~n~~~~~~i~~~i~~~---~p~a~viv~tN  160 (354)
                       .+.|+||+++|.....   ..+.   ...+..|+.....+.+.+.++   ...+.++++|.
T Consensus        82 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS  143 (250)
T PRK12939         82 LGGLDGLVNNAGITNSKSATELDIDTWDAVMNVNVRGTFLMLRAALPHLRDSGRGRIVNLAS  143 (250)
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEECc
Confidence             5789999998864321   1122   223456666665665555433   22456666654

>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]

Probab=97.24  E-value=0.0076  Score=56.37  Aligned_cols=117  Identities=18%  Similarity=0.194  Sum_probs=74.5

Q ss_pred             CCCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCCCCeEEEE----eCCCcHHh------
Q 018512           39 GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGF----LGQPQLEN------  106 (354)
Q Consensus        39 ~~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~~~~v~~~----~~~~d~~~------  106 (354)
                      ..+.+.++|+||++.+|..+|..|+.+|.  .|+|+.+++  +.....++.+.. ...+..+    +..++.+.      
T Consensus         3 ~~~~~~~lITGASsGIG~~~A~~lA~~g~--~liLvaR~~~kL~~la~~l~~~~-~v~v~vi~~DLs~~~~~~~l~~~l~   79 (265)
T COG0300           3 PMKGKTALITGASSGIGAELAKQLARRGY--NLILVARREDKLEALAKELEDKT-GVEVEVIPADLSDPEALERLEDELK   79 (265)
T ss_pred             CCCCcEEEEECCCchHHHHHHHHHHHCCC--EEEEEeCcHHHHHHHHHHHHHhh-CceEEEEECcCCChhHHHHHHHHHH
Confidence            34566899999999999999999999998  999999987  556666777543 1222221    11112211      


Q ss_pred             -hhCCCcEEEEcCCCCCCCC------CCHHHHHHHHHHHHHH----HHHHHhhhCCCeEEEEec
Q 018512          107 -ALTGMDLVIIPAGVPRKPG------MTRDDLFNINAGIVRT----LCEGIAKCCPNATVNLIS  159 (354)
Q Consensus       107 -al~~aDvVIi~ag~~~~~g------~~r~d~~~~n~~~~~~----i~~~i~~~~p~a~viv~t  159 (354)
                       ..-..|+.|..||...-..      .+-.+++.-|+-.+..    +.+.|.+.. .+.||+++
T Consensus        80 ~~~~~IdvLVNNAG~g~~g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~~-~G~IiNI~  142 (265)
T COG0300          80 ERGGPIDVLVNNAGFGTFGPFLELSLDEEEEMIQLNILALTRLTKAVLPGMVERG-AGHIINIG  142 (265)
T ss_pred             hcCCcccEEEECCCcCCccchhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CceEEEEe
Confidence             1126899999999764221      1234566777655444    445555433 45666664

>PRK12746 short chain dehydrogenase; Provisional

Probab=97.23  E-value=0.011  Score=54.02  Aligned_cols=147  Identities=16%  Similarity=0.146  Sum_probs=78.2

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEe-cCC--chhHHHHHhcCCCCCeEEEE-eCCCc---HHhhhC-----
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYD-VVN--TPGVTADISHMDTGAVVRGF-LGQPQ---LENALT-----  109 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D-~~~--~~g~~~dl~~~~~~~~v~~~-~~~~d---~~~al~-----  109 (354)
                      .++|.|+||+|.+|+.++..|+..|.  ++.+.+ ++.  ......++....  ..+..+ .+-.|   ..++++     
T Consensus         6 ~~~ilItGasg~iG~~la~~l~~~G~--~v~i~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~d~~~i~~~~~~~~~~   81 (254)
T PRK12746          6 GKVALVTGASRGIGRAIAMRLANDGA--LVAIHYGRNKQAADETIREIESNG--GKAFLIEADLNSIDGVKKLVEQLKNE   81 (254)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCC--EEEEEcCCCHHHHHHHHHHHHhcC--CcEEEEEcCcCCHHHHHHHHHHHHHH
Confidence            36899999999999999999999887  776653 433  112222232111  111111 01122   222222     


Q ss_pred             --------CCcEEEEcCCCCCCCC---CC---HHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecCCCCCchHHHHHHHH
Q 018512          110 --------GMDLVIIPAGVPRKPG---MT---RDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNSTVPIAAEVFK  174 (354)
Q Consensus       110 --------~aDvVIi~ag~~~~~g---~~---r~d~~~~n~~~~~~i~~~i~~~~-p~a~viv~tNPv~~~~~~~~~~~~  174 (354)
                              +.|+||+++|......   .+   ....+..|+.....+.+.+.++. ..+.++++|.....          
T Consensus        82 ~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~sS~~~~----------  151 (254)
T PRK12746         82 LQIRVGTSEIDILVNNAGIGTQGTIENTTEEIFDEIMAVNIKAPFFLIQQTLPLLRAEGRVINISSAEVR----------  151 (254)
T ss_pred             hccccCCCCccEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECCHHhc----------
Confidence                    6899999998643211   11   13345577777777777766543 23455555432111          


Q ss_pred             HhCCCCCCCEEEeccchHHHHHHHHHHHhC
Q 018512          175 KAGTYDPKKLLGVTMLDVVRANTFVAEVLG  204 (354)
Q Consensus       175 ~~~~~p~~kviG~t~ld~~r~~~~la~~l~  204 (354)
                        .+.+..-.++.+......+.+.+++.++
T Consensus       152 --~~~~~~~~Y~~sK~a~~~~~~~~~~~~~  179 (254)
T PRK12746        152 --LGFTGSIAYGLSKGALNTMTLPLAKHLG  179 (254)
T ss_pred             --CCCCCCcchHhhHHHHHHHHHHHHHHHh
Confidence              1223333345544444445566666653

>PRK07856 short chain dehydrogenase; Provisional

Probab=97.22  E-value=0.005  Score=56.51  Aligned_cols=141  Identities=11%  Similarity=0.081  Sum_probs=78.3

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEE----eCCCcHHhhh-------CC
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGF----LGQPQLENAL-------TG  110 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~----~~~~d~~~al-------~~  110 (354)
                      .+++.|+||+|.+|..++..|+..|.  +|+++|++...    ...  .  ..+..+    ....+.++++       ..
T Consensus         6 ~k~~lItGas~gIG~~la~~l~~~g~--~v~~~~r~~~~----~~~--~--~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   75 (252)
T PRK07856          6 GRVVLVTGGTRGIGAGIARAFLAAGA--TVVVCGRRAPE----TVD--G--RPAEFHAADVRDPDQVAALVDAIVERHGR   75 (252)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCC--EEEEEeCChhh----hhc--C--CceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            46899999999999999999999887  89999987522    011  1  111111    1111223333       34


Q ss_pred             CcEEEEcCCCCCCC---CCC---HHHHHHHHHHHHHHHHHHHhh----hCCCeEEEEecCCCCCchHHHHHHHHHhCCCC
Q 018512          111 MDLVIIPAGVPRKP---GMT---RDDLFNINAGIVRTLCEGIAK----CCPNATVNLISNPVNSTVPIAAEVFKKAGTYD  180 (354)
Q Consensus       111 aDvVIi~ag~~~~~---g~~---r~d~~~~n~~~~~~i~~~i~~----~~p~a~viv~tNPv~~~~~~~~~~~~~~~~~p  180 (354)
                      .|+||+++|.....   ..+   ....+..|+.....+.+.+.+    ....+.+|++|.-....            +.|
T Consensus        76 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~------------~~~  143 (252)
T PRK07856         76 LDVLVNNAGGSPYALAAEASPRFHEKIVELNLLAPLLVAQAANAVMQQQPGGGSIVNIGSVSGRR------------PSP  143 (252)
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcccccCC------------CCC
Confidence            59999999854211   111   223455666665555555443    22335666665432211            223


Q ss_pred             CCCEEEeccchHHHHHHHHHHHhC
Q 018512          181 PKKLLGVTMLDVVRANTFVAEVLG  204 (354)
Q Consensus       181 ~~kviG~t~ld~~r~~~~la~~l~  204 (354)
                      ..-.++.+......+.+.++..++
T Consensus       144 ~~~~Y~~sK~a~~~l~~~la~e~~  167 (252)
T PRK07856        144 GTAAYGAAKAGLLNLTRSLAVEWA  167 (252)
T ss_pred             CCchhHHHHHHHHHHHHHHHHHhc
Confidence            333344444334456666777665

>PRK07890 short chain dehydrogenase; Provisional

Probab=97.22  E-value=0.0028  Score=58.21  Aligned_cols=115  Identities=16%  Similarity=0.157  Sum_probs=66.8

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc--hhHHHHHhcCCCCCeEEEEe-CCCc---HHh-------hh
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFL-GQPQ---LEN-------AL  108 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~--~g~~~dl~~~~~~~~v~~~~-~~~d---~~~-------al  108 (354)
                      .++|.|+||+|.+|++++..|+.+|.  +|+++|+++.  .....++....  ..+..+. +-++   ++.       .+
T Consensus         5 ~k~vlItGa~~~IG~~la~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~   80 (258)
T PRK07890          5 GKVVVVSGVGPGLGRTLAVRAARAGA--DVVLAARTAERLDEVAAEIDDLG--RRALAVPTDITDEDQCANLVALALERF   80 (258)
T ss_pred             CCEEEEECCCCcHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHHHHHhC--CceEEEecCCCCHHHHHHHHHHHHHHc
Confidence            46899999999999999999999998  8999998762  22223333211  1111111 1112   211       23


Q ss_pred             CCCcEEEEcCCCCCC--C--CCCH---HHHHHHHHHHHHHHHHHHhhhC--CCeEEEEecC
Q 018512          109 TGMDLVIIPAGVPRK--P--GMTR---DDLFNINAGIVRTLCEGIAKCC--PNATVNLISN  160 (354)
Q Consensus       109 ~~aDvVIi~ag~~~~--~--g~~r---~d~~~~n~~~~~~i~~~i~~~~--p~a~viv~tN  160 (354)
                      ...|+||+.+|....  +  ..+.   ...+..|+.....+.+.+.++-  ..+.||++|.
T Consensus        81 g~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~ii~~sS  141 (258)
T PRK07890         81 GRVDALVNNAFRVPSMKPLADADFAHWRAVIELNVLGTLRLTQAFTPALAESGGSIVMINS  141 (258)
T ss_pred             CCccEEEECCccCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCEEEEEec
Confidence            468999999986422  1  1222   2345566665666666655432  1245666654

>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase

Probab=97.22  E-value=0.0048  Score=55.71  Aligned_cols=115  Identities=17%  Similarity=0.225  Sum_probs=66.9

Q ss_pred             EEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC---chhHHHHHhcCCCCCeEEEE--eCCCcHHhhh-------CCCc
Q 018512           45 VAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN---TPGVTADISHMDTGAVVRGF--LGQPQLENAL-------TGMD  112 (354)
Q Consensus        45 I~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~---~~g~~~dl~~~~~~~~v~~~--~~~~d~~~al-------~~aD  112 (354)
                      |.|+|++|.+|+.++..|+.+|.  +|++++++.   ......++.+..........  ....++.+++       ...|
T Consensus         1 vlItG~~g~iG~~la~~l~~~G~--~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   78 (239)
T TIGR01830         1 ALVTGASRGIGRAIALKLAKEGA--KVIITYRSSEEGAEEVVEELKAYGVKALGVVCDVSDREDVKAVVEEIEEELGPID   78 (239)
T ss_pred             CEEECCCcHHHHHHHHHHHHCCC--EEEEEeCCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCCC
Confidence            47899999999999999999887  899998764   12223334332211111111  1111222333       3469


Q ss_pred             EEEEcCCCCCCC---CC---CHHHHHHHHHHHHHHHHHHHhhhC---CCeEEEEecCC
Q 018512          113 LVIIPAGVPRKP---GM---TRDDLFNINAGIVRTLCEGIAKCC---PNATVNLISNP  161 (354)
Q Consensus       113 vVIi~ag~~~~~---g~---~r~d~~~~n~~~~~~i~~~i~~~~---p~a~viv~tNP  161 (354)
                      +||+.+|.....   +.   .....+..|+.....+.+.+.++.   ..+.++++|..
T Consensus        79 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~  136 (239)
T TIGR01830        79 ILVNNAGITRDNLLMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMIKQRSGRIINISSV  136 (239)
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEECCc
Confidence            999998864321   11   123456678777777777766542   23456666543

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.

>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.22  E-value=0.016  Score=53.02  Aligned_cols=34  Identities=21%  Similarity=0.232  Sum_probs=30.3

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   78 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~   78 (354)
                      ++|.|+||+|++|+.++..|+..|.  +|+++|+..
T Consensus         3 k~vlItG~sg~iG~~la~~L~~~g~--~vi~~~r~~   36 (256)
T PRK12745          3 PVALVTGGRRGIGLGIARALAAAGF--DLAINDRPD   36 (256)
T ss_pred             cEEEEeCCCchHHHHHHHHHHHCCC--EEEEEecCc
Confidence            4699999999999999999999887  899999754

>PRK07502 cyclohexadienyl dehydrogenase; Validated

Probab=97.21  E-value=0.0022  Score=61.37  Aligned_cols=68  Identities=26%  Similarity=0.261  Sum_probs=47.2

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcC
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA  118 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~a  118 (354)
                      +||+|||+ |.+|..++..|...+...+|.++|+++..  ...+.....  ....   ..+.++++++||+||++.
T Consensus         7 ~~I~IIG~-G~mG~sla~~l~~~g~~~~V~~~dr~~~~--~~~a~~~g~--~~~~---~~~~~~~~~~aDvViiav   74 (307)
T PRK07502          7 DRVALIGI-GLIGSSLARAIRRLGLAGEIVGADRSAET--RARARELGL--GDRV---TTSAAEAVKGADLVILCV   74 (307)
T ss_pred             cEEEEEee-CHHHHHHHHHHHhcCCCcEEEEEECCHHH--HHHHHhCCC--Ccee---cCCHHHHhcCCCEEEECC
Confidence            68999998 99999999999988865589999997521  111111111  1111   134567789999999985

>PRK06128 oxidoreductase; Provisional

Probab=97.21  E-value=0.0077  Score=57.10  Aligned_cols=116  Identities=22%  Similarity=0.231  Sum_probs=69.2

Q ss_pred             CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc----hhHHHHHhcCCCCCeEEEE-eCCCc---HHh------
Q 018512           41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT----PGVTADISHMDTGAVVRGF-LGQPQ---LEN------  106 (354)
Q Consensus        41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~----~g~~~dl~~~~~~~~v~~~-~~~~d---~~~------  106 (354)
                      +.++|.|+||+|.+|..++..|+..|.  +|++.+.+..    +.....+....  ..+..+ .+-.+   .++      
T Consensus        54 ~~k~vlITGas~gIG~~~a~~l~~~G~--~V~i~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~v~~~~~~~~  129 (300)
T PRK06128         54 QGRKALITGADSGIGRATAIAFAREGA--DIALNYLPEEEQDAAEVVQLIQAEG--RKAVALPGDLKDEAFCRQLVERAV  129 (300)
T ss_pred             CCCEEEEecCCCcHHHHHHHHHHHcCC--EEEEEeCCcchHHHHHHHHHHHHcC--CeEEEEecCCCCHHHHHHHHHHHH
Confidence            346899999999999999999999887  7888776431    11222233221  111111 11112   122      


Q ss_pred             -hhCCCcEEEEcCCCCCCC----CCC---HHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecC
Q 018512          107 -ALTGMDLVIIPAGVPRKP----GMT---RDDLFNINAGIVRTLCEGIAKCC-PNATVNLISN  160 (354)
Q Consensus       107 -al~~aDvVIi~ag~~~~~----g~~---r~d~~~~n~~~~~~i~~~i~~~~-p~a~viv~tN  160 (354)
                       .+...|+||+.||.....    ..+   ....+..|+.....+++.+.++. +.+.||++|.
T Consensus       130 ~~~g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~~sS  192 (300)
T PRK06128        130 KELGGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPPGASIINTGS  192 (300)
T ss_pred             HHhCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCcCCEEEEECC
Confidence             234789999999864211    122   23456778877777777776553 3456666654

>PRK06182 short chain dehydrogenase; Validated

Probab=97.19  E-value=0.0046  Score=57.54  Aligned_cols=113  Identities=13%  Similarity=0.112  Sum_probs=65.4

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEE-EeCCCcHHhhhC-------CCcE
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRG-FLGQPQLENALT-------GMDL  113 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~-~~~~~d~~~al~-------~aDv  113 (354)
                      .++|.|+||+|.+|..++..|+..|.  +|++.+++...  ..++..... ..+.. +....+++++++       +.|+
T Consensus         3 ~k~vlItGasggiG~~la~~l~~~G~--~V~~~~r~~~~--l~~~~~~~~-~~~~~Dv~~~~~~~~~~~~~~~~~~~id~   77 (273)
T PRK06182          3 KKVALVTGASSGIGKATARRLAAQGY--TVYGAARRVDK--MEDLASLGV-HPLSLDVTDEASIKAAVDTIIAEEGRIDV   77 (273)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCC--EEEEEeCCHHH--HHHHHhCCC-eEEEeeCCCHHHHHHHHHHHHHhcCCCCE
Confidence            45899999999999999999999887  89999987521  112221111 11111 111122333333       7899


Q ss_pred             EEEcCCCCCCC---CCC---HHHHHHHHHHH----HHHHHHHHhhhCCCeEEEEecC
Q 018512          114 VIIPAGVPRKP---GMT---RDDLFNINAGI----VRTLCEGIAKCCPNATVNLISN  160 (354)
Q Consensus       114 VIi~ag~~~~~---g~~---r~d~~~~n~~~----~~~i~~~i~~~~p~a~viv~tN  160 (354)
                      ||+.+|.....   ..+   ....+..|+..    ++.+.+.+++... +.|+++|.
T Consensus        78 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~-g~iv~isS  133 (273)
T PRK06182         78 LVNNAGYGSYGAIEDVPIDEARRQFEVNLFGAARLTQLVLPHMRAQRS-GRIINISS  133 (273)
T ss_pred             EEECCCcCCCCchhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHhcCC-CEEEEEcc
Confidence            99999864321   111   22334455543    5666667765543 34555553

>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2

Probab=97.18  E-value=0.0039  Score=56.01  Aligned_cols=36  Identities=31%  Similarity=0.348  Sum_probs=31.8

Q ss_pred             CCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecC
Q 018512           40 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVV   77 (354)
Q Consensus        40 ~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~   77 (354)
                      -+..||+|+|+ |.+|+.++..|+..|.. +|+|+|.+
T Consensus        19 L~~~~V~IvG~-GglGs~ia~~La~~Gvg-~i~lvD~D   54 (200)
T TIGR02354        19 LEQATVAICGL-GGLGSNVAINLARAGIG-KLILVDFD   54 (200)
T ss_pred             HhCCcEEEECc-CHHHHHHHHHHHHcCCC-EEEEECCC
Confidence            34568999999 99999999999999874 89999998

Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.

>PRK08213 gluconate 5-dehydrogenase; Provisional

Probab=97.17  E-value=0.0087  Score=55.09  Aligned_cols=118  Identities=14%  Similarity=0.159  Sum_probs=70.5

Q ss_pred             CCCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc--hhHHHHHhcCCCCCeEEEE-eCCCc---HHhh-----
Q 018512           39 GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGF-LGQPQ---LENA-----  107 (354)
Q Consensus        39 ~~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~--~g~~~dl~~~~~~~~v~~~-~~~~d---~~~a-----  107 (354)
                      +.+.++|.|+||+|.+|++++..|+..|.  +|+++|++..  .....++....  ..+..+ .+-+|   +.++     
T Consensus         9 ~~~~k~ilItGa~g~IG~~la~~l~~~G~--~V~~~~r~~~~~~~~~~~i~~~~--~~~~~~~~Dl~d~~~i~~~~~~~~   84 (259)
T PRK08213          9 DLSGKTALVTGGSRGLGLQIAEALGEAGA--RVVLSARKAEELEEAAAHLEALG--IDALWIAADVADEADIERLAEETL   84 (259)
T ss_pred             CcCCCEEEEECCCchHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHHHHhcC--CeEEEEEccCCCHHHHHHHHHHHH
Confidence            34456899999999999999999999887  8999998652  22222232211  111111 11122   2111     


Q ss_pred             --hCCCcEEEEcCCCCCCCC---C---CHHHHHHHHHHHHHHHHHHHhhh----CCCeEEEEecC
Q 018512          108 --LTGMDLVIIPAGVPRKPG---M---TRDDLFNINAGIVRTLCEGIAKC----CPNATVNLISN  160 (354)
Q Consensus       108 --l~~aDvVIi~ag~~~~~g---~---~r~d~~~~n~~~~~~i~~~i~~~----~p~a~viv~tN  160 (354)
                        +...|.||+++|......   .   .....+..|+.....+.+.+.++    .+.+.++++|.
T Consensus        85 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~~~~~~~~v~~sS  149 (259)
T PRK08213         85 ERFGHVDILVNNAGATWGAPAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMIPRGYGRIINVAS  149 (259)
T ss_pred             HHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHHhcCCeEEEEECC
Confidence              246899999988632111   1   12344567888777777766554    23455666654

>PRK06701 short chain dehydrogenase; Provisional

Probab=97.17  E-value=0.0093  Score=56.38  Aligned_cols=118  Identities=13%  Similarity=0.112  Sum_probs=71.3

Q ss_pred             CCCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc---hhHHHHHhcCCCCCeEEEE-eCCCc---HHhhh---
Q 018512           39 GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT---PGVTADISHMDTGAVVRGF-LGQPQ---LENAL---  108 (354)
Q Consensus        39 ~~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~---~g~~~dl~~~~~~~~v~~~-~~~~d---~~~al---  108 (354)
                      +.+.++|.|+||+|.+|++++..|+..|.  +|++++++..   ......+....  ..+..+ .+-.+   +.+.+   
T Consensus        43 ~~~~k~iLItGasggIG~~la~~l~~~G~--~V~l~~r~~~~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~~~~~~~~i  118 (290)
T PRK06701         43 KLKGKVALITGGDSGIGRAVAVLFAKEGA--DIAIVYLDEHEDANETKQRVEKEG--VKCLLIPGDVSDEAFCKDAVEET  118 (290)
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEeCCcchHHHHHHHHHHhcC--CeEEEEEccCCCHHHHHHHHHHH
Confidence            34456899999999999999999999887  8999998752   12222232211  122221 11112   22222   


Q ss_pred             ----CCCcEEEEcCCCCCCC----CCC---HHHHHHHHHHHHHHHHHHHhhh-CCCeEEEEecC
Q 018512          109 ----TGMDLVIIPAGVPRKP----GMT---RDDLFNINAGIVRTLCEGIAKC-CPNATVNLISN  160 (354)
Q Consensus       109 ----~~aDvVIi~ag~~~~~----g~~---r~d~~~~n~~~~~~i~~~i~~~-~p~a~viv~tN  160 (354)
                          ...|+||+.||.....    ..+   ....+..|+.....+++.+.++ .+.+.+|++|.
T Consensus       119 ~~~~~~iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~g~iV~isS  182 (290)
T PRK06701        119 VRELGRLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQGSAIINTGS  182 (290)
T ss_pred             HHHcCCCCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhhCCeEEEEec
Confidence                3579999998863211    122   2345677887777888777654 34456666654

>PRK07024 short chain dehydrogenase; Provisional

Probab=97.17  E-value=0.0041  Score=57.37  Aligned_cols=35  Identities=37%  Similarity=0.350  Sum_probs=31.6

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   78 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~   78 (354)
                      +++|.|+||+|.+|..++..|+..|.  +|+++|++.
T Consensus         2 ~~~vlItGas~gIG~~la~~l~~~G~--~v~~~~r~~   36 (257)
T PRK07024          2 PLKVFITGASSGIGQALAREYARQGA--TLGLVARRT   36 (257)
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCC--EEEEEeCCH
Confidence            35899999999999999999999887  899999875

>PRK06138 short chain dehydrogenase; Provisional

Probab=97.16  E-value=0.0046  Score=56.45  Aligned_cols=112  Identities=17%  Similarity=0.142  Sum_probs=63.5

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc--hhHHHHHhcCCCCCeEEEEe-CCCc---HHhhh-------
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFL-GQPQ---LENAL-------  108 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~--~g~~~dl~~~~~~~~v~~~~-~~~d---~~~al-------  108 (354)
                      .++++|+||+|.+|+.++..|+..|.  +|++++++..  .....++. ..  ..+..+. +-+|   +.+++       
T Consensus         5 ~k~~lItG~sg~iG~~la~~l~~~G~--~v~~~~r~~~~~~~~~~~~~-~~--~~~~~~~~D~~~~~~~~~~~~~i~~~~   79 (252)
T PRK06138          5 GRVAIVTGAGSGIGRATAKLFAREGA--RVVVADRDAEAAERVAAAIA-AG--GRAFARQGDVGSAEAVEALVDFVAARW   79 (252)
T ss_pred             CcEEEEeCCCchHHHHHHHHHHHCCC--eEEEecCCHHHHHHHHHHHh-cC--CeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            45899999999999999999999887  8999998752  22222232 11  1122211 1122   22222       


Q ss_pred             CCCcEEEEcCCCCCCC---CCCHH---HHHHHHHHHHHH----HHHHHhhhCCCeEEEEec
Q 018512          109 TGMDLVIIPAGVPRKP---GMTRD---DLFNINAGIVRT----LCEGIAKCCPNATVNLIS  159 (354)
Q Consensus       109 ~~aDvVIi~ag~~~~~---g~~r~---d~~~~n~~~~~~----i~~~i~~~~p~a~viv~t  159 (354)
                      .+.|+||+++|.....   ..+..   ..+..|+.....    +.+.+++.. .+.|+++|
T Consensus        80 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~ii~~s  139 (252)
T PRK06138         80 GRLDVLVNNAGFGCGGTVVTTDEADWDAVMRVNVGGVFLWAKYAIPIMQRQG-GGSIVNTA  139 (252)
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcC-CeEEEEEC
Confidence            3789999999864321   11222   234566555444    444444433 34555554

>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

Probab=97.16  E-value=0.005  Score=56.03  Aligned_cols=113  Identities=19%  Similarity=0.261  Sum_probs=65.2

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc--hhHHHHHhcCCCCCeEEEEeC-CCc---HHhhh-------
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFLG-QPQ---LENAL-------  108 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~--~g~~~dl~~~~~~~~v~~~~~-~~d---~~~al-------  108 (354)
                      .++|+|+||+|.+|..++..|+..|.  +|++++++..  .....++....  ..+..+.. -.|   +++.+       
T Consensus         6 ~~~ilItGasg~iG~~l~~~l~~~g~--~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~~~~   81 (251)
T PRK12826          6 GRVALVTGAARGIGRAIAVRLAADGA--EVIVVDICGDDAAATAELVEAAG--GKARARQVDVRDRAALKAAVAAGVEDF   81 (251)
T ss_pred             CCEEEEcCCCCcHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcC--CeEEEEECCCCCHHHHHHHHHHHHHHh
Confidence            45899999999999999999999887  8999998751  22223333221  12222211 112   22323       


Q ss_pred             CCCcEEEEcCCCCCC-C--CCCH---HHHHHHHHHHHHHHHHHH----hhhCCCeEEEEec
Q 018512          109 TGMDLVIIPAGVPRK-P--GMTR---DDLFNINAGIVRTLCEGI----AKCCPNATVNLIS  159 (354)
Q Consensus       109 ~~aDvVIi~ag~~~~-~--g~~r---~d~~~~n~~~~~~i~~~i----~~~~p~a~viv~t  159 (354)
                      ...|+||+++|.... +  ..+.   .+.+..|+.....+.+.+    .+..+ ..++++|
T Consensus        82 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-~~ii~~s  141 (251)
T PRK12826         82 GRLDILVANAGIFPLTPFAEMDDEQWERVIDVNLTGTFLLTQAALPALIRAGG-GRIVLTS  141 (251)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCC-cEEEEEe
Confidence            378999999876432 1  1222   234556666555555554    33333 3445444

>PRK09291 short chain dehydrogenase; Provisional

Probab=97.16  E-value=0.012  Score=53.81  Aligned_cols=115  Identities=15%  Similarity=0.170  Sum_probs=63.2

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc--hhHHHHHhcCCCCCeEEE--EeCCCcHHhhhC-CCcEEEEc
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRG--FLGQPQLENALT-GMDLVIIP  117 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~--~g~~~dl~~~~~~~~v~~--~~~~~d~~~al~-~aDvVIi~  117 (354)
                      ++|.|+||+|.+|+.++..|+..|.  .|++.+++..  .....+.........+..  +....++..++. +.|+||++
T Consensus         3 ~~vlVtGasg~iG~~ia~~l~~~G~--~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~id~vi~~   80 (257)
T PRK09291          3 KTILITGAGSGFGREVALRLARKGH--NVIAGVQIAPQVTALRAEAARRGLALRVEKLDLTDAIDRAQAAEWDVDVLLNN   80 (257)
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeCCCHHHHHHHhcCCCCEEEEC
Confidence            3799999999999999999999887  8888887652  111111111111111111  111123344444 89999999


Q ss_pred             CCCCCCC---CCCHH---HHHHHHHHH----HHHHHHHHhhhCCCeEEEEecC
Q 018512          118 AGVPRKP---GMTRD---DLFNINAGI----VRTLCEGIAKCCPNATVNLISN  160 (354)
Q Consensus       118 ag~~~~~---g~~r~---d~~~~n~~~----~~~i~~~i~~~~p~a~viv~tN  160 (354)
                      +|.....   ..+..   ..+.-|+..    .+.+.+.+.+... +.|+++|.
T Consensus        81 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~-~~iv~~SS  132 (257)
T PRK09291         81 AGIGEAGAVVDIPVELVRELFETNVFGPLELTQGFVRKMVARGK-GKVVFTSS  132 (257)
T ss_pred             CCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC-ceEEEEcC
Confidence            9865321   11221   223345443    3344444444443 45666653

>TIGR00872 gnd_rel 6-phosphogluconate dehydrogenase (decarboxylating)

Probab=97.16  E-value=0.0038  Score=59.55  Aligned_cols=95  Identities=18%  Similarity=0.188  Sum_probs=59.1

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcCCCCC
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVPR  122 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~ag~~~  122 (354)
                      |||+|||. |.+|++++..|...++  +|.++|+++..  ...+.....    .......++.+.++++|+||++...  
T Consensus         1 M~Ig~IGl-G~mG~~la~~L~~~g~--~V~~~dr~~~~--~~~l~~~g~----~~~~s~~~~~~~~~~~dvIi~~vp~--   69 (298)
T TIGR00872         1 MQLGLIGL-GRMGANIVRRLAKRGH--DCVGYDHDQDA--VKAMKEDRT----TGVANLRELSQRLSAPRVVWVMVPH--   69 (298)
T ss_pred             CEEEEEcc-hHHHHHHHHHHHHCCC--EEEEEECCHHH--HHHHHHcCC----cccCCHHHHHhhcCCCCEEEEEcCc--
Confidence            68999999 9999999999999887  89999997622  222222211    0111112334456789999998311  


Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecCCC
Q 018512          123 KPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPV  162 (354)
Q Consensus       123 ~~g~~r~d~~~~n~~~~~~i~~~i~~~~-p~a~viv~tNPv  162 (354)
                                    ..++++++.+.... ++.+||..||..
T Consensus        70 --------------~~~~~v~~~l~~~l~~g~ivid~st~~   96 (298)
T TIGR00872        70 --------------GIVDAVLEELAPTLEKGDIVIDGGNSY   96 (298)
T ss_pred             --------------hHHHHHHHHHHhhCCCCCEEEECCCCC
Confidence                          02333344444443 566777777654

This family resembles a larger family (gnd) of bacterial and eukaryotic 6-phosphogluconate dehydrogenases but differs from it by a deep split in a UPGMA similarity clustering tree and the lack of a central region of about 140 residues. Among complete genomes, it is found is found in Bacillus subtilis and Mycobacterium tuberculosis, both of which also contain gnd, and in Aquifex aeolicus. The protein from Methylobacillus flagellatus KT has been characterized as a decarboxylating 6-phosphogluconate dehydrogenase as part of an unusual formaldehyde oxidation cycle. In some sequenced organisms members of this family are the sole 6-phosphogluconate dehydrogenase present and are probably active in the pentose phosphate cycle.

>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase

Probab=97.15  E-value=0.0011  Score=62.46  Aligned_cols=96  Identities=15%  Similarity=0.118  Sum_probs=62.7

Q ss_pred             EEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhC--CCcEEEEcCCCCCC
Q 018512           46 AILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALT--GMDLVIIPAGVPRK  123 (354)
Q Consensus        46 ~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~--~aDvVIi~ag~~~~  123 (354)
                      .|+||+|++|++++..|+..+.  ++++..... .   .|+.+            ..++.+.++  ++|+||++|+....
T Consensus         1 lItGa~GfiG~~l~~~L~~~g~--~v~~~~~~~-~---~Dl~~------------~~~l~~~~~~~~~d~Vih~A~~~~~   62 (306)
T PLN02725          1 FVAGHRGLVGSAIVRKLEALGF--TNLVLRTHK-E---LDLTR------------QADVEAFFAKEKPTYVILAAAKVGG   62 (306)
T ss_pred             CcccCCCcccHHHHHHHHhCCC--cEEEeeccc-c---CCCCC------------HHHHHHHHhccCCCEEEEeeeeecc
Confidence            3899999999999999988876  444443221 0   11211            123344444  57999999875321


Q ss_pred             ---CCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 018512          124 ---PGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  159 (354)
Q Consensus       124 ---~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~t  159 (354)
                         ......++...|+....++++.+++.....+|+..|
T Consensus        63 ~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~i~~SS  101 (306)
T PLN02725         63 IHANMTYPADFIRENLQIQTNVIDAAYRHGVKKLLFLGS  101 (306)
T ss_pred             cchhhhCcHHHHHHHhHHHHHHHHHHHHcCCCeEEEeCc
Confidence               122345677889999999999999876554444433

>PRK07774 short chain dehydrogenase; Provisional

Probab=97.15  E-value=0.005  Score=56.19  Aligned_cols=114  Identities=17%  Similarity=0.161  Sum_probs=66.6

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc--hhHHHHHhcCCCCCeEEEE-eCCCcH---Hh-------hh
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGF-LGQPQL---EN-------AL  108 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~--~g~~~dl~~~~~~~~v~~~-~~~~d~---~~-------al  108 (354)
                      .+++.|+||+|.+|.+++..|+..|.  +|+++|+++.  .....++.+...  .+..+ .+-++.   .+       .+
T Consensus         6 ~k~vlItGasg~iG~~la~~l~~~g~--~vi~~~r~~~~~~~~~~~~~~~~~--~~~~~~~Dl~~~~~~~~~~~~~~~~~   81 (250)
T PRK07774          6 DKVAIVTGAAGGIGQAYAEALAREGA--SVVVADINAEGAERVAKQIVADGG--TAIAVQVDVSDPDSAKAMADATVSAF   81 (250)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcCC--cEEEEEcCCCCHHHHHHHHHHHHHHh
Confidence            35899999999999999999999887  8999998752  222222322211  11111 111222   11       22


Q ss_pred             CCCcEEEEcCCCCCC------CCCCH---HHHHHHHHHHHHHHHHHHhhhC---CCeEEEEec
Q 018512          109 TGMDLVIIPAGVPRK------PGMTR---DDLFNINAGIVRTLCEGIAKCC---PNATVNLIS  159 (354)
Q Consensus       109 ~~aDvVIi~ag~~~~------~g~~r---~d~~~~n~~~~~~i~~~i~~~~---p~a~viv~t  159 (354)
                      ...|+||+++|....      ...+.   .+.+..|+.....+.+.+.++.   +.+.|+++|
T Consensus        82 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~s  144 (250)
T PRK07774         82 GGIDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRAVYKHMAKRGGGAIVNQS  144 (250)
T ss_pred             CCCCEEEECCCCcCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCcEEEEEe
Confidence            468999999986421      11222   2345567666666666655442   234566555

>PRK08655 prephenate dehydrogenase; Provisional

Probab=97.15  E-value=0.003  Score=63.52  Aligned_cols=66  Identities=24%  Similarity=0.374  Sum_probs=47.1

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcC
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA  118 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~a  118 (354)
                      |||+||||+|.+|..++..|...|+  +|.++|+++...  .++.... .  +..   +++..+++.+||+||++.
T Consensus         1 MkI~IIGG~G~mG~slA~~L~~~G~--~V~v~~r~~~~~--~~~a~~~-g--v~~---~~~~~e~~~~aDvVIlav   66 (437)
T PRK08655          1 MKISIIGGTGGLGKWFARFLKEKGF--EVIVTGRDPKKG--KEVAKEL-G--VEY---ANDNIDAAKDADIVIISV   66 (437)
T ss_pred             CEEEEEecCCHHHHHHHHHHHHCCC--EEEEEECChHHH--HHHHHHc-C--Cee---ccCHHHHhccCCEEEEec
Confidence            6899998669999999999998887  899999875221  1111111 1  111   245677899999999985

>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

Probab=97.13  E-value=0.02  Score=52.55  Aligned_cols=157  Identities=15%  Similarity=0.121  Sum_probs=94.0

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCCCCeEEEEeCCC-------cHHhhhCCCcE
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLGQP-------QLENALTGMDL  113 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~~~~v~~~~~~~-------d~~~al~~aDv  113 (354)
                      +-+.|+||++.+|.++|..|...|.  .|+|..++.  ++..+.++.+....+..-.+.+..       .+.+.+...|+
T Consensus         7 kv~lITGASSGiG~A~A~~l~~~G~--~vvl~aRR~drL~~la~~~~~~~~~~~~~DVtD~~~~~~~i~~~~~~~g~iDi   84 (246)
T COG4221           7 KVALITGASSGIGEATARALAEAGA--KVVLAARREERLEALADEIGAGAALALALDVTDRAAVEAAIEALPEEFGRIDI   84 (246)
T ss_pred             cEEEEecCcchHHHHHHHHHHHCCC--eEEEEeccHHHHHHHHHhhccCceEEEeeccCCHHHHHHHHHHHHHhhCcccE
Confidence            4588999999999999999999999  999999986  455556666411111110011111       13455688999


Q ss_pred             EEEcCCCCCCCC------CCHHHHHHHHHHHHHHHHHHHhhh---CCCeEEEEecCCCCCchHHHHHHHHHhCCCCCCCE
Q 018512          114 VIIPAGVPRKPG------MTRDDLFNINAGIVRTLCEGIAKC---CPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKL  184 (354)
Q Consensus       114 VIi~ag~~~~~g------~~r~d~~~~n~~~~~~i~~~i~~~---~p~a~viv~tNPv~~~~~~~~~~~~~~~~~p~~kv  184 (354)
                      +|..||...-..      .+...++..|+..+......+-..   ...+.||+.+.-....            .+|...+
T Consensus        85 LvNNAGl~~g~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r~~G~IiN~~SiAG~~------------~y~~~~v  152 (246)
T COG4221          85 LVNNAGLALGDPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVERKSGHIINLGSIAGRY------------PYPGGAV  152 (246)
T ss_pred             EEecCCCCcCChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhcCCceEEEeccccccc------------cCCCCcc
Confidence            999999754321      124567778887766665554432   2356888887533322            3666778


Q ss_pred             EEeccchHHHHHHHHHHHhCCCCCCCcceEE
Q 018512          185 LGVTMLDVVRANTFVAEVLGLDPRDVDVPVV  215 (354)
Q Consensus       185 iG~t~ld~~r~~~~la~~l~v~~~~v~~~v~  215 (354)
                      +|-|.-....|...|-..+  ....|++..|
T Consensus       153 Y~ATK~aV~~fs~~LR~e~--~g~~IRVt~I  181 (246)
T COG4221         153 YGATKAAVRAFSLGLRQEL--AGTGIRVTVI  181 (246)
T ss_pred             chhhHHHHHHHHHHHHHHh--cCCCeeEEEe
Confidence            8776433333333333322  2344544443

>PRK06841 short chain dehydrogenase; Provisional

Probab=97.13  E-value=0.0051  Score=56.38  Aligned_cols=114  Identities=19%  Similarity=0.308  Sum_probs=65.7

Q ss_pred             CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc-hhHHHHHhcCCCCCeEEEE-eCCCc---HHhh-------h
Q 018512           41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT-PGVTADISHMDTGAVVRGF-LGQPQ---LENA-------L  108 (354)
Q Consensus        41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~-~g~~~dl~~~~~~~~v~~~-~~~~d---~~~a-------l  108 (354)
                      +.++|.|+||+|.+|+.++..|+..|.  +|++.+++.. .....++..    ..+..+ .+-.+   +++.       +
T Consensus        14 ~~k~vlItGas~~IG~~la~~l~~~G~--~Vi~~~r~~~~~~~~~~~~~----~~~~~~~~Dl~~~~~~~~~~~~~~~~~   87 (255)
T PRK06841         14 SGKVAVVTGGASGIGHAIAELFAAKGA--RVALLDRSEDVAEVAAQLLG----GNAKGLVCDVSDSQSVEAAVAAVISAF   87 (255)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHhhC----CceEEEEecCCCHHHHHHHHHHHHHHh
Confidence            345899999999999999999999887  8999998752 112222221    111111 11112   2222       2


Q ss_pred             CCCcEEEEcCCCCCCCC---CCH---HHHHHHHHHHHHHHHHHHhhh---CCCeEEEEecC
Q 018512          109 TGMDLVIIPAGVPRKPG---MTR---DDLFNINAGIVRTLCEGIAKC---CPNATVNLISN  160 (354)
Q Consensus       109 ~~aDvVIi~ag~~~~~g---~~r---~d~~~~n~~~~~~i~~~i~~~---~p~a~viv~tN  160 (354)
                      ...|+||+++|......   .+.   ...+..|+.....+.+.+..+   ...+.++++|.
T Consensus        88 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS  148 (255)
T PRK06841         88 GRIDILVNSAGVALLAPAEDVSEEDWDKTIDINLKGSFLMAQAVGRHMIAAGGGKIVNLAS  148 (255)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhcHHHHHHHHHHHHHHHhcCCceEEEEcc
Confidence            46799999998643111   111   224566766666666665443   12455665553

>PLN02688 pyrroline-5-carboxylate reductase

Probab=97.12  E-value=0.0043  Score=57.88  Aligned_cols=66  Identities=17%  Similarity=0.287  Sum_probs=46.3

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCC--CcEEEEE-ecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcC
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPL--VSVLHLY-DVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA  118 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~--~~ei~L~-D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~a  118 (354)
                      |||++||. |.+|..++..|+..++  ..+|+++ |+++..  ...+....    +..   ..+..+++++||+||++.
T Consensus         1 ~kI~~IG~-G~mG~a~a~~L~~~g~~~~~~i~v~~~r~~~~--~~~~~~~g----~~~---~~~~~e~~~~aDvVil~v   69 (266)
T PLN02688          1 FRVGFIGA-GKMAEAIARGLVASGVVPPSRISTADDSNPAR--RDVFQSLG----VKT---AASNTEVVKSSDVIILAV   69 (266)
T ss_pred             CeEEEECC-cHHHHHHHHHHHHCCCCCcceEEEEeCCCHHH--HHHHHHcC----CEE---eCChHHHHhcCCEEEEEE
Confidence            79999998 9999999999998775  4578888 765422  22232221    222   124467789999999985

>PRK12935 acetoacetyl-CoA reductase; Provisional

Probab=97.12  E-value=0.011  Score=53.79  Aligned_cols=115  Identities=13%  Similarity=0.205  Sum_probs=65.4

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC---chhHHHHHhcCCCCCeEEEEe-CCCc---HHhhh------
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN---TPGVTADISHMDTGAVVRGFL-GQPQ---LENAL------  108 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~---~~g~~~dl~~~~~~~~v~~~~-~~~d---~~~al------  108 (354)
                      ..++.|+||+|.+|+.++..|+..|.  ++++.+...   ......++.+..  ..+..+. +-.+   +.+++      
T Consensus         6 ~~~~lItG~s~~iG~~la~~l~~~g~--~v~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~   81 (247)
T PRK12935          6 GKVAIVTGGAKGIGKAITVALAQEGA--KVVINYNSSKEAAENLVNELGKEG--HDVYAVQADVSKVEDANRLVEEAVNH   81 (247)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHcCC--EEEEEcCCcHHHHHHHHHHHHhcC--CeEEEEECCCCCHHHHHHHHHHHHHH
Confidence            35899999999999999999998887  776655432   222223343221  1222211 1112   22233      


Q ss_pred             -CCCcEEEEcCCCCCCCC------CCHHHHHHHHHHHHHHHHHHHhhh---CCCeEEEEecC
Q 018512          109 -TGMDLVIIPAGVPRKPG------MTRDDLFNINAGIVRTLCEGIAKC---CPNATVNLISN  160 (354)
Q Consensus       109 -~~aDvVIi~ag~~~~~g------~~r~d~~~~n~~~~~~i~~~i~~~---~p~a~viv~tN  160 (354)
                       ...|+||+++|......      ....+.+..|+.....+.+.+..+   ...+.++++|.
T Consensus        82 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS  143 (247)
T PRK12935         82 FGKVDILVNNAGITRDRTFKKLNREDWERVIDVNLSSVFNTTSAVLPYITEAEEGRIISISS  143 (247)
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcc
Confidence             34799999998743221      112344567777666666665543   23445555554

>PRK06101 short chain dehydrogenase; Provisional

Probab=97.11  E-value=0.011  Score=53.91  Aligned_cols=145  Identities=19%  Similarity=0.148  Sum_probs=80.1

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCe-EEE-EeCCCcHHhhhCC----CcEEEE
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAV-VRG-FLGQPQLENALTG----MDLVII  116 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~-v~~-~~~~~d~~~al~~----aDvVIi  116 (354)
                      .++.|+||+|.+|..++..|+..|.  +|++.|+++...  .++........ +.. .....+.+++++.    .|.+|+
T Consensus         2 ~~vlItGas~giG~~la~~L~~~G~--~V~~~~r~~~~~--~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~d~~i~   77 (240)
T PRK06101          2 TAVLITGATSGIGKQLALDYAKQGW--QVIACGRNQSVL--DELHTQSANIFTLAFDVTDHPGTKAALSQLPFIPELWIF   77 (240)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhCCC--EEEEEECCHHHH--HHHHHhcCCCeEEEeeCCCHHHHHHHHHhcccCCCEEEE
Confidence            4799999999999999999999887  899999875211  11211111111 111 1111223333333    478888


Q ss_pred             cCCCCCCCC---CCH---HHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecCCCCCchHHHHHHHHHhCCCCCCCEEEecc
Q 018512          117 PAGVPRKPG---MTR---DDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTM  189 (354)
Q Consensus       117 ~ag~~~~~g---~~r---~d~~~~n~~~~~~i~~~i~~~~-p~a~viv~tNPv~~~~~~~~~~~~~~~~~p~~kviG~t~  189 (354)
                      .+|......   .+.   .+.+.-|+.....+.+.+..+- +.+.++++|.-....            +.|..-.++.+.
T Consensus        78 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~isS~~~~~------------~~~~~~~Y~asK  145 (240)
T PRK06101         78 NAGDCEYMDDGKVDATLMARVFNVNVLGVANCIEGIQPHLSCGHRVVIVGSIASEL------------ALPRAEAYGASK  145 (240)
T ss_pred             cCcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCeEEEEechhhcc------------CCCCCchhhHHH
Confidence            777432111   222   2356778877777777776542 344555555322111            233333455554


Q ss_pred             chHHHHHHHHHHHh
Q 018512          190 LDVVRANTFVAEVL  203 (354)
Q Consensus       190 ld~~r~~~~la~~l  203 (354)
                      ....++.+.++..+
T Consensus       146 ~a~~~~~~~l~~e~  159 (240)
T PRK06101        146 AAVAYFARTLQLDL  159 (240)
T ss_pred             HHHHHHHHHHHHHH
Confidence            44455666666544

>PRK06179 short chain dehydrogenase; Provisional

Probab=97.11  E-value=0.0058  Score=56.67  Aligned_cols=110  Identities=15%  Similarity=0.153  Sum_probs=62.3

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEE-EeCCCcHHhhhC-------CCcEE
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRG-FLGQPQLENALT-------GMDLV  114 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~-~~~~~d~~~al~-------~aDvV  114 (354)
                      ++|.|+||+|.+|+.++..|+..|.  +|++.+++.....  ...+.   ..+.. .....+++++++       ..|+|
T Consensus         5 ~~vlVtGasg~iG~~~a~~l~~~g~--~V~~~~r~~~~~~--~~~~~---~~~~~D~~d~~~~~~~~~~~~~~~g~~d~l   77 (270)
T PRK06179          5 KVALVTGASSGIGRATAEKLARAGY--RVFGTSRNPARAA--PIPGV---ELLELDVTDDASVQAAVDEVIARAGRIDVL   77 (270)
T ss_pred             CEEEEecCCCHHHHHHHHHHHHCCC--EEEEEeCChhhcc--ccCCC---eeEEeecCCHHHHHHHHHHHHHhCCCCCEE
Confidence            4799999999999999999999887  8999998752110  00110   01111 111122334443       46999


Q ss_pred             EEcCCCCCCCC---CC---HHHHHHHHHHHHHHHHHH----HhhhCCCeEEEEecC
Q 018512          115 IIPAGVPRKPG---MT---RDDLFNINAGIVRTLCEG----IAKCCPNATVNLISN  160 (354)
Q Consensus       115 Ii~ag~~~~~g---~~---r~d~~~~n~~~~~~i~~~----i~~~~p~a~viv~tN  160 (354)
                      |+++|......   .+   ....+..|......+.+.    +++.+. +.|+++|.
T Consensus        78 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~-~~iv~isS  132 (270)
T PRK06179         78 VNNAGVGLAGAAEESSIAQAQALFDTNVFGILRMTRAVLPHMRAQGS-GRIINISS  132 (270)
T ss_pred             EECCCCCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC-ceEEEECC
Confidence            99998753221   11   233445565444444444    454443 44555554

>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase

Probab=97.11  E-value=0.0085  Score=54.68  Aligned_cols=113  Identities=16%  Similarity=0.183  Sum_probs=64.1

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc--hhHHHHHhcCCCCCeEEEE-eCCCc----------HHhhhC
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGF-LGQPQ----------LENALT  109 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~--~g~~~dl~~~~~~~~v~~~-~~~~d----------~~~al~  109 (354)
                      ++|.|+||+|++|+.++..|+..|.  +|++++++..  .....++....  ..+..+ .+-.|          ..+.+.
T Consensus         2 ~~vlItGa~g~lG~~l~~~l~~~g~--~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~~   77 (255)
T TIGR01963         2 KTALVTGAASGIGLAIALALAAAGA--NVVVNDLGEAGAEAAAKVATDAG--GSVIYLVADVTKEDEIADMIAAAAAEFG   77 (255)
T ss_pred             CEEEEcCCcchHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcC--CceEEEECCCCCHHHHHHHHHHHHHhcC
Confidence            4799999999999999999999888  8999999762  11222222211  112211 11122          123356


Q ss_pred             CCcEEEEcCCCCCC-C--CCCH---HHHHHHHHHHHHHHHHHH----hhhCCCeEEEEecC
Q 018512          110 GMDLVIIPAGVPRK-P--GMTR---DDLFNINAGIVRTLCEGI----AKCCPNATVNLISN  160 (354)
Q Consensus       110 ~aDvVIi~ag~~~~-~--g~~r---~d~~~~n~~~~~~i~~~i----~~~~p~a~viv~tN  160 (354)
                      +.|+||+.++.... +  ..+.   ......|......+.+.+    ++... ..++++|.
T Consensus        78 ~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~-~~~v~~ss  137 (255)
T TIGR01963        78 GLDILVNNAGIQHVAPIEEFPPEDWDRIIAIMLTSAFHTIRAALPHMKKQGW-GRIINIAS  137 (255)
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC-eEEEEEcc
Confidence            78999999886421 1  1112   233445666555555544    44333 34555543

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.

>PRK05650 short chain dehydrogenase; Provisional

Probab=97.11  E-value=0.0064  Score=56.49  Aligned_cols=113  Identities=19%  Similarity=0.142  Sum_probs=64.3

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc--hhHHHHHhcCCCCCeEEEE-eCCCc---HHhh-------hC
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGF-LGQPQ---LENA-------LT  109 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~--~g~~~dl~~~~~~~~v~~~-~~~~d---~~~a-------l~  109 (354)
                      ++|.|+||+|.+|+.++..|+..|.  +|++.|++..  .....++.....  .+..+ .+-++   ..+.       +.
T Consensus         1 ~~vlVtGasggIG~~la~~l~~~g~--~V~~~~r~~~~~~~~~~~l~~~~~--~~~~~~~D~~~~~~~~~~~~~i~~~~~   76 (270)
T PRK05650          1 NRVMITGAASGLGRAIALRWAREGW--RLALADVNEEGGEETLKLLREAGG--DGFYQRCDVRDYSQLTALAQACEEKWG   76 (270)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcCC--ceEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            4799999999999999999999887  8999998752  222233433221  11111 11122   2222       24


Q ss_pred             CCcEEEEcCCCCCCC---CCCHH---HHHHHHHH----HHHHHHHHHhhhCCCeEEEEecC
Q 018512          110 GMDLVIIPAGVPRKP---GMTRD---DLFNINAG----IVRTLCEGIAKCCPNATVNLISN  160 (354)
Q Consensus       110 ~aDvVIi~ag~~~~~---g~~r~---d~~~~n~~----~~~~i~~~i~~~~p~a~viv~tN  160 (354)
                      ..|+||+++|.....   ..+..   ..+..|+.    ..+.+.+.+++.. .+.|+++|.
T Consensus        77 ~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~vsS  136 (270)
T PRK05650         77 GIDVIVNNAGVASGGFFEELSLEDWDWQIAINLMGVVKGCKAFLPLFKRQK-SGRIVNIAS  136 (270)
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCC-CCEEEEECC
Confidence            689999998864321   12222   23455644    4444555555543 345555553

>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1

Probab=97.11  E-value=0.00051  Score=65.08  Aligned_cols=96  Identities=22%  Similarity=0.253  Sum_probs=59.1

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhh--CCCcEEEEcCCC
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENAL--TGMDLVIIPAGV  120 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al--~~aDvVIi~ag~  120 (354)
                      |||.|+||+|++|+++...|...++  +++.++...     .|+.+..            .+.+.+  .+.|+||++|+.
T Consensus         1 MriLI~GasG~lG~~l~~~l~~~~~--~v~~~~r~~-----~dl~d~~------------~~~~~~~~~~pd~Vin~aa~   61 (286)
T PF04321_consen    1 MRILITGASGFLGSALARALKERGY--EVIATSRSD-----LDLTDPE------------AVAKLLEAFKPDVVINCAAY   61 (286)
T ss_dssp             EEEEEETTTSHHHHHHHHHHTTTSE--EEEEESTTC-----S-TTSHH------------HHHHHHHHH--SEEEE----
T ss_pred             CEEEEECCCCHHHHHHHHHHhhCCC--EEEEeCchh-----cCCCCHH------------HHHHHHHHhCCCeEecccee
Confidence            8999999999999999999988777  888887653     2222211            111112  258999999876


Q ss_pred             CCCC--CCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 018512          121 PRKP--GMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  159 (354)
Q Consensus       121 ~~~~--g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~t  159 (354)
                      ....  ..........|+.....+++.+.+.+  +.+|.+|
T Consensus        62 ~~~~~ce~~p~~a~~iN~~~~~~la~~~~~~~--~~li~~S  100 (286)
T PF04321_consen   62 TNVDACEKNPEEAYAINVDATKNLAEACKERG--ARLIHIS  100 (286)
T ss_dssp             --HHHHHHSHHHHHHHHTHHHHHHHHHHHHCT---EEEEEE
T ss_pred             ecHHhhhhChhhhHHHhhHHHHHHHHHHHHcC--CcEEEee
Confidence            4211  12344566789999999999998763  4444443

1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.

>PRK08085 gluconate 5-dehydrogenase; Provisional

Probab=97.10  E-value=0.0066  Score=55.71  Aligned_cols=114  Identities=20%  Similarity=0.277  Sum_probs=64.9

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCCCCeEEEE-eCCCc---HHhh-------h
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGF-LGQPQ---LENA-------L  108 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~~~~v~~~-~~~~d---~~~a-------l  108 (354)
                      .+++.|+||+|.+|.+++..|+..|.  +|++.|++.  ......++.+..  ..+..+ .+-.|   .++.       +
T Consensus         9 ~k~~lItGas~giG~~ia~~L~~~G~--~vvl~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~~~~   84 (254)
T PRK08085          9 GKNILITGSAQGIGFLLATGLAEYGA--EIIINDITAERAELAVAKLRQEG--IKAHAAPFNVTHKQEVEAAIEHIEKDI   84 (254)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHcCC--EEEEEcCCHHHHHHHHHHHHhcC--CeEEEEecCCCCHHHHHHHHHHHHHhc
Confidence            34899999999999999999999887  899999875  222233343322  111111 11112   1121       2


Q ss_pred             CCCcEEEEcCCCCCCC---CCC---HHHHHHHHHHHHHHHHHHHhhh---CCCeEEEEec
Q 018512          109 TGMDLVIIPAGVPRKP---GMT---RDDLFNINAGIVRTLCEGIAKC---CPNATVNLIS  159 (354)
Q Consensus       109 ~~aDvVIi~ag~~~~~---g~~---r~d~~~~n~~~~~~i~~~i~~~---~p~a~viv~t  159 (354)
                      ...|+||+++|.....   ..+   ....+..|+.....+.+.+.++   ...+.|+++|
T Consensus        85 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~is  144 (254)
T PRK08085         85 GPIDVLINNAGIQRRHPFTEFPEQEWNDVIAVNQTAVFLVSQAVARYMVKRQAGKIINIC  144 (254)
T ss_pred             CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEc
Confidence            4579999999864211   112   2234556655544444444433   2335566555

>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=97.10  E-value=0.0049  Score=56.78  Aligned_cols=156  Identities=17%  Similarity=0.205  Sum_probs=83.3

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEE-eCCC---cHHhh-------hCC
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGF-LGQP---QLENA-------LTG  110 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~-~~~~---d~~~a-------l~~  110 (354)
                      .+++.|+||+|.+|..++..|+..|.  +|++++++........+....  ..+..+ .+-+   +.+++       +..
T Consensus         8 ~k~~lItGas~gIG~aia~~l~~~G~--~vv~~~~~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~   83 (251)
T PRK12481          8 GKVAIITGCNTGLGQGMAIGLAKAGA--DIVGVGVAEAPETQAQVEALG--RKFHFITADLIQQKDIDSIVSQAVEVMGH   83 (251)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCC--EEEEecCchHHHHHHHHHHcC--CeEEEEEeCCCCHHHHHHHHHHHHHHcCC
Confidence            35799999999999999999999998  899998754322222232221  112111 1111   22222       245


Q ss_pred             CcEEEEcCCCCCCC---CCCH---HHHHHHHHH----HHHHHHHHHhhhCCCeEEEEecCCCCCchHHHHHHHHHhCCCC
Q 018512          111 MDLVIIPAGVPRKP---GMTR---DDLFNINAG----IVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYD  180 (354)
Q Consensus       111 aDvVIi~ag~~~~~---g~~r---~d~~~~n~~----~~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~~~~~~~~~~p  180 (354)
                      .|++|+.||.....   ..+.   ...+..|+.    ..+.+.+.+.+....+.||+++......            +.+
T Consensus        84 iD~lv~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~------------~~~  151 (251)
T PRK12481         84 IDILINNAGIIRRQDLLEFGNKDWDDVININQKTVFFLSQAVAKQFVKQGNGGKIINIASMLSFQ------------GGI  151 (251)
T ss_pred             CCEEEECCCcCCCCCcccCCHHHHHHHheeCcHHHHHHHHHHHHHHHHcCCCCEEEEeCChhhcC------------CCC
Confidence            79999999864321   1122   223445544    3455555555444346666665432211            122


Q ss_pred             CCCEEEeccchHHHHHHHHHHHhCCCCCCCcceEE
Q 018512          181 PKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVV  215 (354)
Q Consensus       181 ~~kviG~t~ld~~r~~~~la~~l~v~~~~v~~~v~  215 (354)
                      ..-.++.+......+.+.+|..+.  +..|++..+
T Consensus       152 ~~~~Y~asK~a~~~l~~~la~e~~--~~girvn~v  184 (251)
T PRK12481        152 RVPSYTASKSAVMGLTRALATELS--QYNINVNAI  184 (251)
T ss_pred             CCcchHHHHHHHHHHHHHHHHHHh--hcCeEEEEE
Confidence            222345544444556666776653  344444333

>PRK07097 gluconate 5-dehydrogenase; Provisional

Probab=97.10  E-value=0.0085  Score=55.49  Aligned_cols=147  Identities=14%  Similarity=0.164  Sum_probs=79.1

Q ss_pred             CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCCCCeEEEE-eCCCcH---Hhh-------
Q 018512           41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGF-LGQPQL---ENA-------  107 (354)
Q Consensus        41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~~~~v~~~-~~~~d~---~~a-------  107 (354)
                      +.+++.|+||+|.+|..++..|+..|.  ++++.|.+.  ......++....  ..+..+ .+-++.   +++       
T Consensus         9 ~~k~~lItGa~~~iG~~ia~~l~~~G~--~vv~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~~~   84 (265)
T PRK07097          9 KGKIALITGASYGIGFAIAKAYAKAGA--TIVFNDINQELVDKGLAAYRELG--IEAHGYVCDVTDEDGVQAMVSQIEKE   84 (265)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC--eEEEEeCCHHHHHHHHHHHHhcC--CceEEEEcCCCCHHHHHHHHHHHHHh
Confidence            445899999999999999999998887  889998875  222223333221  112211 111221   122       


Q ss_pred             hCCCcEEEEcCCCCCCC---CCCH---HHHHHHHHHH----HHHHHHHHhhhCCCeEEEEecCCCCCchHHHHHHHHHhC
Q 018512          108 LTGMDLVIIPAGVPRKP---GMTR---DDLFNINAGI----VRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAG  177 (354)
Q Consensus       108 l~~aDvVIi~ag~~~~~---g~~r---~d~~~~n~~~----~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~~~~~~~~  177 (354)
                      +...|+||+++|.....   ..+.   ...+..|+..    .+.+.+.+++. ..+.|++++......            
T Consensus        85 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~g~iv~isS~~~~~------------  151 (265)
T PRK07097         85 VGVIDILVNNAGIIKRIPMLEMSAEDFRQVIDIDLNAPFIVSKAVIPSMIKK-GHGKIINICSMMSEL------------  151 (265)
T ss_pred             CCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhc-CCcEEEEEcCccccC------------
Confidence            24579999999864211   1111   2233445443    33444444432 355666666543221            


Q ss_pred             CCCCCCEEEeccchHHHHHHHHHHHhC
Q 018512          178 TYDPKKLLGVTMLDVVRANTFVAEVLG  204 (354)
Q Consensus       178 ~~p~~kviG~t~ld~~r~~~~la~~l~  204 (354)
                      +.+..-.++.+...-..+.+.+++.++
T Consensus       152 ~~~~~~~Y~~sKaal~~l~~~la~e~~  178 (265)
T PRK07097        152 GRETVSAYAAAKGGLKMLTKNIASEYG  178 (265)
T ss_pred             CCCCCccHHHHHHHHHHHHHHHHHHhh
Confidence            223333445543333456677777664

>PRK07680 late competence protein ComER; Validated

Probab=97.10  E-value=0.0038  Score=58.65  Aligned_cols=97  Identities=16%  Similarity=0.216  Sum_probs=62.0

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCC--CcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcCCC
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPL--VSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGV  120 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~--~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~ag~  120 (354)
                      |||+|||+ |.+|+.++..|...+.  ..+|.++|++...  ...+.+.  .+.+...   .+..++++++|+||++.. 
T Consensus         1 m~I~iIG~-G~mG~ala~~L~~~g~~~~~~v~v~~r~~~~--~~~~~~~--~~g~~~~---~~~~~~~~~aDiVilav~-   71 (273)
T PRK07680          1 MNIGFIGT-GNMGTILIEAFLESGAVKPSQLTITNRTPAK--AYHIKER--YPGIHVA---KTIEEVISQSDLIFICVK-   71 (273)
T ss_pred             CEEEEECc-cHHHHHHHHHHHHCCCCCcceEEEECCCHHH--HHHHHHH--cCCeEEE---CCHHHHHHhCCEEEEecC-
Confidence            68999998 9999999999988773  2479999987521  1222221  1122322   345677899999999851 


Q ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecCCCC
Q 018512          121 PRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVN  163 (354)
Q Consensus       121 ~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~-p~a~viv~tNPv~  163 (354)
                      |               ..+.++++.+..+- ++.+|+-+++++.
T Consensus        72 p---------------~~~~~vl~~l~~~l~~~~~iis~~ag~~  100 (273)
T PRK07680         72 P---------------LDIYPLLQKLAPHLTDEHCLVSITSPIS  100 (273)
T ss_pred             H---------------HHHHHHHHHHHhhcCCCCEEEEECCCCC
Confidence            1               12334445554443 5677777888764

>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated

Probab=97.10  E-value=0.013  Score=53.83  Aligned_cols=115  Identities=16%  Similarity=0.220  Sum_probs=66.2

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEe-CCCc---HHhhh-------CC
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFL-GQPQ---LENAL-------TG  110 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~-~~~d---~~~al-------~~  110 (354)
                      .+.+.|+|++|.+|.+++..|+..|.  +|+++|.........++....  ..+..+. +-+|   .++.+       ..
T Consensus        10 ~k~~lItG~~~gIG~a~a~~l~~~G~--~vv~~~~~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   85 (253)
T PRK08993         10 GKVAVVTGCDTGLGQGMALGLAEAGC--DIVGINIVEPTETIEQVTALG--RRFLSLTADLRKIDGIPALLERAVAEFGH   85 (253)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCC--EEEEecCcchHHHHHHHHhcC--CeEEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence            35799999999999999999999887  888888765322223333221  1122111 1112   22222       36


Q ss_pred             CcEEEEcCCCCCCC---CCC---HHHHHHHHHHHHHH----HHHHHhhhCCCeEEEEecC
Q 018512          111 MDLVIIPAGVPRKP---GMT---RDDLFNINAGIVRT----LCEGIAKCCPNATVNLISN  160 (354)
Q Consensus       111 aDvVIi~ag~~~~~---g~~---r~d~~~~n~~~~~~----i~~~i~~~~p~a~viv~tN  160 (354)
                      .|++|++||.....   ..+   ....+..|+.....    +.+.+.+..+.+.++++|.
T Consensus        86 ~D~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~g~iv~isS  145 (253)
T PRK08993         86 IDILVNNAGLIRREDAIEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNGGKIINIAS  145 (253)
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEECc
Confidence            89999999864311   112   23345566555444    4444444444576776654

>PRK11880 pyrroline-5-carboxylate reductase; Reviewed

Probab=97.09  E-value=0.003  Score=58.98  Aligned_cols=95  Identities=15%  Similarity=0.191  Sum_probs=59.1

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCC-CcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcCCC
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPL-VSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGV  120 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~-~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~ag~  120 (354)
                      +|||+|||+ |.+|..++..|...+. ..++.++|+++..  ...+.+.. .  +..   +.+..+.++++|+||++.. 
T Consensus         2 mm~I~iIG~-G~mG~~la~~l~~~g~~~~~v~v~~r~~~~--~~~~~~~~-g--~~~---~~~~~~~~~~advVil~v~-   71 (267)
T PRK11880          2 MKKIGFIGG-GNMASAIIGGLLASGVPAKDIIVSDPSPEK--RAALAEEY-G--VRA---ATDNQEAAQEADVVVLAVK-   71 (267)
T ss_pred             CCEEEEEec-hHHHHHHHHHHHhCCCCcceEEEEcCCHHH--HHHHHHhc-C--Cee---cCChHHHHhcCCEEEEEcC-
Confidence            479999999 9999999999988762 2378999987521  12222210 0  121   2344567899999999841 


Q ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCC
Q 018512          121 PRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPV  162 (354)
Q Consensus       121 ~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv  162 (354)
                                     ...+.++++.+..+. +..|+..+|-+
T Consensus        72 ---------------~~~~~~v~~~l~~~~-~~~vvs~~~gi   97 (267)
T PRK11880         72 ---------------PQVMEEVLSELKGQL-DKLVVSIAAGV   97 (267)
T ss_pred             ---------------HHHHHHHHHHHHhhc-CCEEEEecCCC
Confidence                           113444445554433 45566666655

>PRK05854 short chain dehydrogenase; Provisional

Probab=97.09  E-value=0.0084  Score=57.37  Aligned_cols=172  Identities=17%  Similarity=0.078  Sum_probs=86.8

Q ss_pred             CCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc--hhHHHHHhcCCCCCeEEEE-eCCCcH---H-------h
Q 018512           40 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGF-LGQPQL---E-------N  106 (354)
Q Consensus        40 ~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~--~g~~~dl~~~~~~~~v~~~-~~~~d~---~-------~  106 (354)
                      .+.+++.|+||+|.+|..++..|+..|.  +|++.+++..  .....++........+..+ .+-.|+   +       +
T Consensus        12 l~gk~~lITGas~GIG~~~a~~La~~G~--~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~~~   89 (313)
T PRK05854         12 LSGKRAVVTGASDGLGLGLARRLAAAGA--EVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAALGEQLRA   89 (313)
T ss_pred             cCCCEEEEeCCCChHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHHHHHH
Confidence            3456899999999999999999999887  8999998762  2223334321111122221 111222   1       1


Q ss_pred             hhCCCcEEEEcCCCCCCC--CCC---HHHHHHHHHH----HHHHHHHHHhhhCCCeEEEEecCCCCCchHHHHHHHHHhC
Q 018512          107 ALTGMDLVIIPAGVPRKP--GMT---RDDLFNINAG----IVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAG  177 (354)
Q Consensus       107 al~~aDvVIi~ag~~~~~--g~~---r~d~~~~n~~----~~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~~~~~~~~  177 (354)
                      .....|++|+.||....+  ..+   ....+..|..    ..+.+.+.+++.  .+.|+++|.-......+-..-+....
T Consensus        90 ~~~~iD~li~nAG~~~~~~~~~t~~~~e~~~~vN~~g~~~l~~~llp~l~~~--~~riv~vsS~~~~~~~~~~~~~~~~~  167 (313)
T PRK05854         90 EGRPIHLLINNAGVMTPPERQTTADGFELQFGTNHLGHFALTAHLLPLLRAG--RARVTSQSSIAARRGAINWDDLNWER  167 (313)
T ss_pred             hCCCccEEEECCccccCCccccCcccHHHHhhhhhHHHHHHHHHHHHHHHhC--CCCeEEEechhhcCCCcCcccccccc
Confidence            224589999999864321  111   2223444543    355555555533  34555554322111000000000001


Q ss_pred             CCCCCCEEEeccchHHHHHHHHHHHhCCCCCCCcceEE
Q 018512          178 TYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVV  215 (354)
Q Consensus       178 ~~p~~kviG~t~ld~~r~~~~la~~l~v~~~~v~~~v~  215 (354)
                      .+++...++.+.+....+...+++.+......|.+..+
T Consensus       168 ~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~~gI~v~~v  205 (313)
T PRK05854        168 SYAGMRAYSQSKIAVGLFALELDRRSRAAGWGITSNLA  205 (313)
T ss_pred             cCcchhhhHHHHHHHHHHHHHHHHHhhcCCCCeEEEEE
Confidence            12333445555555556667777665443444544443

>PRK08589 short chain dehydrogenase; Validated

Probab=97.09  E-value=0.009  Score=55.72  Aligned_cols=117  Identities=17%  Similarity=0.210  Sum_probs=65.7

Q ss_pred             CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC-chhHHHHHhcCCCCCe-EEE-EeCCCcHHhh-------hCC
Q 018512           41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN-TPGVTADISHMDTGAV-VRG-FLGQPQLENA-------LTG  110 (354)
Q Consensus        41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~-~~g~~~dl~~~~~~~~-v~~-~~~~~d~~~a-------l~~  110 (354)
                      +.+++.|+||+|.+|..++..|+..|.  +|+++++++ ......++.+...... +.. +....+..++       +..
T Consensus         5 ~~k~vlItGas~gIG~aia~~l~~~G~--~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~   82 (272)
T PRK08589          5 ENKVAVITGASTGIGQASAIALAQEGA--YVLAVDIAEAVSETVDKIKSNGGKAKAYHVDISDEQQVKDFASEIKEQFGR   82 (272)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC--EEEEEeCcHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHHHcCC
Confidence            345899999999999999999999987  899999874 2222334433211111 111 1111112222       245


Q ss_pred             CcEEEEcCCCCCCCC----CCH---HHHHHHHHH----HHHHHHHHHhhhCCCeEEEEecCC
Q 018512          111 MDLVIIPAGVPRKPG----MTR---DDLFNINAG----IVRTLCEGIAKCCPNATVNLISNP  161 (354)
Q Consensus       111 aDvVIi~ag~~~~~g----~~r---~d~~~~n~~----~~~~i~~~i~~~~p~a~viv~tNP  161 (354)
                      .|++|+.||.....+    .+.   ...+..|+.    ..+.+.+.+.+.  .+.|+++|..
T Consensus        83 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~--~g~iv~isS~  142 (272)
T PRK08589         83 VDVLFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLMTKMLLPLMMEQ--GGSIINTSSF  142 (272)
T ss_pred             cCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc--CCEEEEeCch
Confidence            799999998753211    122   223334544    344555555433  3667776643

>PRK07063 short chain dehydrogenase; Provisional

Probab=97.09  E-value=0.022  Score=52.44  Aligned_cols=116  Identities=22%  Similarity=0.268  Sum_probs=65.4

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCCCCeEEEEe-CCCc---HHhhh-------
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQ---LENAL-------  108 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~~~~v~~~~-~~~d---~~~al-------  108 (354)
                      .+++.|+||+|.+|..++..|+..|.  +|+++|+++  ......++........+..+. +-++   ..+++       
T Consensus         7 ~k~vlVtGas~gIG~~~a~~l~~~G~--~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   84 (260)
T PRK07063          7 GKVALVTGAAQGIGAAIARAFAREGA--AVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAEEAF   84 (260)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHHHHHh
Confidence            45799999999999999999999987  899999876  222333343211111222211 1112   22222       


Q ss_pred             CCCcEEEEcCCCCCCC---CCCH---HHHHHHHHHHH----HHHHHHHhhhCCCeEEEEecC
Q 018512          109 TGMDLVIIPAGVPRKP---GMTR---DDLFNINAGIV----RTLCEGIAKCCPNATVNLISN  160 (354)
Q Consensus       109 ~~aDvVIi~ag~~~~~---g~~r---~d~~~~n~~~~----~~i~~~i~~~~p~a~viv~tN  160 (354)
                      ...|++|+.+|.....   ..+.   ...+..|+...    +...+.+++. ..+.|+++|.
T Consensus        85 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~g~iv~isS  145 (260)
T PRK07063         85 GPLDVLVNNAGINVFADPLAMTDEDWRRCFAVDLDGAWNGCRAVLPGMVER-GRGSIVNIAS  145 (260)
T ss_pred             CCCcEEEECCCcCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhh-CCeEEEEECC
Confidence            3689999999864211   1122   22344555444    4444444433 3456666654

>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate

Probab=97.09  E-value=0.0013  Score=54.11  Aligned_cols=72  Identities=21%  Similarity=0.279  Sum_probs=46.0

Q ss_pred             eEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHH-HHhc-CCCCCeEEEEeCCCcHHhhhCCCcEEEEcC
Q 018512           44 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTA-DISH-MDTGAVVRGFLGQPQLENALTGMDLVIIPA  118 (354)
Q Consensus        44 kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~-dl~~-~~~~~~v~~~~~~~d~~~al~~aDvVIi~a  118 (354)
                      ||+|+||+|++|..++..|...+...-+.+++.....|... +... ......+....  .+ .+.+.++|+||.+.
T Consensus         1 rV~IvGAtG~vG~~l~~lL~~hp~~e~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~--~~-~~~~~~~Dvvf~a~   74 (121)
T PF01118_consen    1 RVAIVGATGYVGRELLRLLAEHPDFELVALVSSSRSAGKPLSEVFPHPKGFEDLSVED--AD-PEELSDVDVVFLAL   74 (121)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTSTEEEEEEEESTTTTTSBHHHTTGGGTTTEEEBEEE--TS-GHHHTTESEEEE-S
T ss_pred             CEEEECCCCHHHHHHHHHHhcCCCccEEEeeeeccccCCeeehhccccccccceeEee--cc-hhHhhcCCEEEecC
Confidence            79999999999999999999877665667777765223211 1111 11122333321  24 36689999999984

This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=97.09  E-value=0.0049  Score=65.25  Aligned_cols=92  Identities=20%  Similarity=0.164  Sum_probs=62.0

Q ss_pred             CCCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhh--CCCcEEEE
Q 018512           39 GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENAL--TGMDLVII  116 (354)
Q Consensus        39 ~~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al--~~aDvVIi  116 (354)
                      +.+.|||.|+||+|++|++++..|...+.  ++... ..       |+.+.            ..+...+  .+.|+||+
T Consensus       377 ~~~~mkiLVtGa~G~iG~~l~~~L~~~g~--~v~~~-~~-------~l~d~------------~~v~~~i~~~~pd~Vih  434 (668)
T PLN02260        377 GKPSLKFLIYGRTGWIGGLLGKLCEKQGI--AYEYG-KG-------RLEDR------------SSLLADIRNVKPTHVFN  434 (668)
T ss_pred             CCCCceEEEECCCchHHHHHHHHHHhCCC--eEEee-cc-------ccccH------------HHHHHHHHhhCCCEEEE
Confidence            44568999999999999999999988776  55211 10       11110            0111222  26899999


Q ss_pred             cCCCCCCC--C---CCHHHHHHHHHHHHHHHHHHHhhhCCC
Q 018512          117 PAGVPRKP--G---MTRDDLFNINAGIVRTLCEGIAKCCPN  152 (354)
Q Consensus       117 ~ag~~~~~--g---~~r~d~~~~n~~~~~~i~~~i~~~~p~  152 (354)
                      +|+....+  +   ....+....|+....++++.+++.+..
T Consensus       435 ~Aa~~~~~~~~~~~~~~~~~~~~N~~gt~~l~~a~~~~g~~  475 (668)
T PLN02260        435 AAGVTGRPNVDWCESHKVETIRANVVGTLTLADVCRENGLL  475 (668)
T ss_pred             CCcccCCCCCChHHhCHHHHHHHHhHHHHHHHHHHHHcCCe
Confidence            99865322  1   134566789999999999999988653

>PLN00016 RNA-binding protein; Provisional

Probab=97.07  E-value=0.0039  Score=61.28  Aligned_cols=101  Identities=18%  Similarity=0.157  Sum_probs=60.3

Q ss_pred             CCCCCeEEEE----cCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHH------HHHhcCCCCCeEEEEe-CCCcHHhh
Q 018512           39 GAAGFKVAIL----GAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVT------ADISHMDTGAVVRGFL-GQPQLENA  107 (354)
Q Consensus        39 ~~~~~kI~Ii----Ga~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~------~dl~~~~~~~~v~~~~-~~~d~~~a  107 (354)
                      ...++||.|+    ||+|++|++++..|+..|+  +|++++++......      .++.+.. ...++.+. +-.|+.+.
T Consensus        49 ~~~~~~VLVt~~~~GatG~iG~~lv~~L~~~G~--~V~~l~R~~~~~~~~~~~~~~~~~~l~-~~~v~~v~~D~~d~~~~  125 (378)
T PLN00016         49 AVEKKKVLIVNTNSGGHAFIGFYLAKELVKAGH--EVTLFTRGKEPSQKMKKEPFSRFSELS-SAGVKTVWGDPADVKSK  125 (378)
T ss_pred             ccccceEEEEeccCCCceeEhHHHHHHHHHCCC--EEEEEecCCcchhhhccCchhhhhHhh-hcCceEEEecHHHHHhh
Confidence            3345789999    9999999999999999998  99999987521110      0011110 01122221 11233344


Q ss_pred             h--CCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEE
Q 018512          108 L--TGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVN  156 (354)
Q Consensus       108 l--~~aDvVIi~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~vi  156 (354)
                      +  .++|+||.+++..              ....+.+++.+++.+.+-+|.
T Consensus       126 ~~~~~~d~Vi~~~~~~--------------~~~~~~ll~aa~~~gvkr~V~  162 (378)
T PLN00016        126 VAGAGFDVVYDNNGKD--------------LDEVEPVADWAKSPGLKQFLF  162 (378)
T ss_pred             hccCCccEEEeCCCCC--------------HHHHHHHHHHHHHcCCCEEEE
Confidence            4  5799999986421              234556777777666554433

>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

Probab=97.07  E-value=0.0055  Score=56.67  Aligned_cols=35  Identities=20%  Similarity=0.288  Sum_probs=31.5

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   78 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~   78 (354)
                      .+++.|+||+|.+|..++..|+..|.  +|+++|++.
T Consensus         5 ~k~vlItGas~gIG~~ia~~l~~~G~--~V~~~~r~~   39 (262)
T TIGR03325         5 GEVVLVTGGASGLGRAIVDRFVAEGA--RVAVLDKSA   39 (262)
T ss_pred             CcEEEEECCCChHHHHHHHHHHHCCC--EEEEEeCCH
Confidence            45899999999999999999999987  899999865

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.

>COG2084 MmsB 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases [Lipid metabolism]

Probab=97.07  E-value=0.0036  Score=59.21  Aligned_cols=65  Identities=18%  Similarity=0.249  Sum_probs=49.2

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcC
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA  118 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~a  118 (354)
                      +||++||- |.+|+..|..|+..|+  +++++|+++.+. +..+.....    ..   ..+..++.++||+||.+.
T Consensus         1 ~kIafIGL-G~MG~pmA~~L~~aG~--~v~v~~r~~~ka-~~~~~~~Ga----~~---a~s~~eaa~~aDvVitmv   65 (286)
T COG2084           1 MKIAFIGL-GIMGSPMAANLLKAGH--EVTVYNRTPEKA-AELLAAAGA----TV---AASPAEAAAEADVVITML   65 (286)
T ss_pred             CeEEEEcC-chhhHHHHHHHHHCCC--EEEEEeCChhhh-hHHHHHcCC----cc---cCCHHHHHHhCCEEEEec
Confidence            58999999 9999999999999998  999999986432 233333221    11   124478999999999974

>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.06  E-value=0.0069  Score=54.76  Aligned_cols=102  Identities=18%  Similarity=0.276  Sum_probs=57.4

Q ss_pred             CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc---hhHHHHHhcCCCCCeEEEEe-CCCc---HHhh------
Q 018512           41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT---PGVTADISHMDTGAVVRGFL-GQPQ---LENA------  107 (354)
Q Consensus        41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~---~g~~~dl~~~~~~~~v~~~~-~~~d---~~~a------  107 (354)
                      ++++|.|+||+|.+|+.++..|+++|+  ++++......   .....++....  ..+..+. +-.+   +.++      
T Consensus         5 ~~~~vlItGasg~iG~~l~~~l~~~g~--~v~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~v~~~~~~~~~   80 (249)
T PRK12825          5 MGRVALVTGAARGLGRAIALRLARAGA--DVVVHYRSDEEAAEELVEAVEALG--RRAQAVQADVTDKAALEAAVAAAVE   80 (249)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC--eEEEEeCCCHHHHHHHHHHHHhcC--CceEEEECCcCCHHHHHHHHHHHHH
Confidence            346899999999999999999999988  6666555431   11122222211  1222211 1112   2222      


Q ss_pred             -hCCCcEEEEcCCCCCCC---CCCH---HHHHHHHHHHHHHHHHHH
Q 018512          108 -LTGMDLVIIPAGVPRKP---GMTR---DDLFNINAGIVRTLCEGI  146 (354)
Q Consensus       108 -l~~aDvVIi~ag~~~~~---g~~r---~d~~~~n~~~~~~i~~~i  146 (354)
                       +.+.|+||+++|.....   ..+.   .+.+..|+.....+.+.+
T Consensus        81 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~  126 (249)
T PRK12825         81 RFGRIDILVNNAGIFEDKPLADMSDDEWDEVIDVNLSGVFHLLRAV  126 (249)
T ss_pred             HcCCCCEEEECCccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHH
Confidence             24679999999854221   1222   334556666655555555

>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=97.05  E-value=0.0083  Score=55.25  Aligned_cols=115  Identities=17%  Similarity=0.179  Sum_probs=64.5

Q ss_pred             CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC-chhHHHHHhcCCCCCeEEEE-eCCCc---HHhhhC------
Q 018512           41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN-TPGVTADISHMDTGAVVRGF-LGQPQ---LENALT------  109 (354)
Q Consensus        41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~-~~g~~~dl~~~~~~~~v~~~-~~~~d---~~~al~------  109 (354)
                      ..++|.|+||+|.+|..++..|+..|.  .|++++.+. .......+....  ..+..+ .+-++   .++.++      
T Consensus        14 ~~k~vlItGas~gIG~~ia~~l~~~G~--~v~~~~~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~i~~~~~~~~~~~   89 (258)
T PRK06935         14 DGKVAIVTGGNTGLGQGYAVALAKAGA--DIIITTHGTNWDETRRLIEKEG--RKVTFVQVDLTKPESAEKVVKEALEEF   89 (258)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC--EEEEEeCCcHHHHHHHHHHhcC--CceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            346899999999999999999999887  889998864 222222222221  112211 11122   222333      


Q ss_pred             -CCcEEEEcCCCCCCC---CCC---HHHHHHHHHHHHHHHH----HHHhhhCCCeEEEEecC
Q 018512          110 -GMDLVIIPAGVPRKP---GMT---RDDLFNINAGIVRTLC----EGIAKCCPNATVNLISN  160 (354)
Q Consensus       110 -~aDvVIi~ag~~~~~---g~~---r~d~~~~n~~~~~~i~----~~i~~~~p~a~viv~tN  160 (354)
                       ..|++|+++|.....   ..+   ..+.+..|+.....+.    +.+++.. .+.++++|.
T Consensus        90 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~isS  150 (258)
T PRK06935         90 GKIDILVNNAGTIRRAPLLEYKDEDWNAVMDINLNSVYHLSQAVAKVMAKQG-SGKIINIAS  150 (258)
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhCHHHHHHHHHHHHHHHhcC-CeEEEEECC
Confidence             679999999864311   112   2233455655544444    4444332 355666654

>PRK05855 short chain dehydrogenase; Validated

Probab=97.05  E-value=0.022  Score=58.54  Aligned_cols=118  Identities=18%  Similarity=0.187  Sum_probs=69.3

Q ss_pred             CCCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc--hhHHHHHhcCCCCCeEEEEe-CCCcH---Hhh-----
Q 018512           39 GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFL-GQPQL---ENA-----  107 (354)
Q Consensus        39 ~~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~--~g~~~dl~~~~~~~~v~~~~-~~~d~---~~a-----  107 (354)
                      +.+.+++.|+||+|.+|..++..|+..|.  +|++.+++..  .....++....  ..+..+. +-+|.   .+.     
T Consensus       312 ~~~~~~~lv~G~s~giG~~~a~~l~~~G~--~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~~~~~~~~~~  387 (582)
T PRK05855        312 PFSGKLVVVTGAGSGIGRETALAFAREGA--EVVASDIDEAAAERTAELIRAAG--AVAHAYRVDVSDADAMEAFAEWVR  387 (582)
T ss_pred             cCCCCEEEEECCcCHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcC--CeEEEEEcCCCCHHHHHHHHHHHH
Confidence            44557899999999999999999999988  8999998762  22233333221  1122111 11221   122     


Q ss_pred             --hCCCcEEEEcCCCCCCC---CCCH---HHHHHHHHHHH----HHHHHHHhhhCCCeEEEEecC
Q 018512          108 --LTGMDLVIIPAGVPRKP---GMTR---DDLFNINAGIV----RTLCEGIAKCCPNATVNLISN  160 (354)
Q Consensus       108 --l~~aDvVIi~ag~~~~~---g~~r---~d~~~~n~~~~----~~i~~~i~~~~p~a~viv~tN  160 (354)
                        +...|++|++||.....   ..+.   ...+.-|+...    +.+.+.+.+.+..+.|+++|.
T Consensus       388 ~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~~sS  452 (582)
T PRK05855        388 AEHGVPDIVVNNAGIGMAGGFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQMVERGTGGHIVNVAS  452 (582)
T ss_pred             HhcCCCcEEEECCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECC
Confidence              23579999999875321   1222   22344565444    445555665555566776664

>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated

Probab=97.05  E-value=0.011  Score=54.27  Aligned_cols=116  Identities=19%  Similarity=0.204  Sum_probs=66.4

Q ss_pred             CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCCCCeEEEE-eCCCc---HHh-------h
Q 018512           41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGF-LGQPQ---LEN-------A  107 (354)
Q Consensus        41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~~~~v~~~-~~~~d---~~~-------a  107 (354)
                      ..++|.|+||+|.+|+.++..|...|.  ++++.|.+.  ......++.+...  .+..+ .+-++   ..+       .
T Consensus        10 ~~k~vlVtG~s~gIG~~la~~l~~~G~--~vv~~~r~~~~~~~~~~~l~~~~~--~~~~~~~D~~~~~~i~~~~~~~~~~   85 (255)
T PRK06113         10 DGKCAIITGAGAGIGKEIAITFATAGA--SVVVSDINADAANHVVDEIQQLGG--QAFACRCDITSEQELSALADFALSK   85 (255)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC--eEEEEeCCHHHHHHHHHHHHhcCC--cEEEEEccCCCHHHHHHHHHHHHHH
Confidence            346899999999999999999999887  889999865  2222233333211  11111 11112   122       2


Q ss_pred             hCCCcEEEEcCCCCCC--CCCCHHH---HHHHHHHHHHHHHHHHhhh---CCCeEEEEecC
Q 018512          108 LTGMDLVIIPAGVPRK--PGMTRDD---LFNINAGIVRTLCEGIAKC---CPNATVNLISN  160 (354)
Q Consensus       108 l~~aDvVIi~ag~~~~--~g~~r~d---~~~~n~~~~~~i~~~i~~~---~p~a~viv~tN  160 (354)
                      +...|++|+++|....  ...+..+   .+..|+.....+.+.+..+   ...+.++++|.
T Consensus        86 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS  146 (255)
T PRK06113         86 LGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITS  146 (255)
T ss_pred             cCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCcEEEEEec
Confidence            3457999999885321  1222222   3566776666666655432   22344555543

>COG2910 Putative NADH-flavin reductase [General function prediction only]

Probab=97.04  E-value=0.0086  Score=52.71  Aligned_cols=104  Identities=17%  Similarity=0.181  Sum_probs=63.0

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcCCCCC
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVPR  122 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~ag~~~  122 (354)
                      |||+||||+|.+|+.++...+.+|+  |++-+=+++.+-.+.  +.... ..-..+ ..+.+.+++.|-|+||.+-|.+.
T Consensus         1 mKIaiIgAsG~~Gs~i~~EA~~RGH--eVTAivRn~~K~~~~--~~~~i-~q~Dif-d~~~~a~~l~g~DaVIsA~~~~~   74 (211)
T COG2910           1 MKIAIIGASGKAGSRILKEALKRGH--EVTAIVRNASKLAAR--QGVTI-LQKDIF-DLTSLASDLAGHDAVISAFGAGA   74 (211)
T ss_pred             CeEEEEecCchhHHHHHHHHHhCCC--eeEEEEeChHhcccc--cccee-eccccc-ChhhhHhhhcCCceEEEeccCCC
Confidence            7999999999999999999999999  999888876221110  10000 000111 11234578999999999865542


Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 018512          123 KPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  159 (354)
Q Consensus       123 ~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~t  159 (354)
                       ++.   +  ..-.+..+.+...++.. -...++++.
T Consensus        75 -~~~---~--~~~~k~~~~li~~l~~a-gv~RllVVG  104 (211)
T COG2910          75 -SDN---D--ELHSKSIEALIEALKGA-GVPRLLVVG  104 (211)
T ss_pred             -CCh---h--HHHHHHHHHHHHHHhhc-CCeeEEEEc
Confidence             111   1  12223355555555543 355666664

>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated

Probab=97.04  E-value=0.011  Score=58.93  Aligned_cols=102  Identities=22%  Similarity=0.232  Sum_probs=60.3

Q ss_pred             CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCe-EEE-EeCCCcHHhhhCCCcEEEEcC
Q 018512           41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAV-VRG-FLGQPQLENALTGMDLVIIPA  118 (354)
Q Consensus        41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~-v~~-~~~~~d~~~al~~aDvVIi~a  118 (354)
                      ++++|.|+||+|.+|.+++..|+..|.  +|+++|+++.. ....+........ +.. .....+..+.+.+.|++|+.|
T Consensus       177 ~gK~VLITGASgGIG~aLA~~La~~G~--~Vi~l~r~~~~-l~~~~~~~~~~v~~v~~Dvsd~~~v~~~l~~IDiLInnA  253 (406)
T PRK07424        177 KGKTVAVTGASGTLGQALLKELHQQGA--KVVALTSNSDK-ITLEINGEDLPVKTLHWQVGQEAALAELLEKVDILIINH  253 (406)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC--EEEEEeCCHHH-HHHHHhhcCCCeEEEEeeCCCHHHHHHHhCCCCEEEECC
Confidence            456899999999999999999999887  89999986521 1111211111111 111 111123345678999999998


Q ss_pred             CCCCCCCCCH---HHHHHHHHHHHHHHHHH
Q 018512          119 GVPRKPGMTR---DDLFNINAGIVRTLCEG  145 (354)
Q Consensus       119 g~~~~~g~~r---~d~~~~n~~~~~~i~~~  145 (354)
                      |.......+.   .+.+..|+.....+.+.
T Consensus       254 Gi~~~~~~s~e~~~~~~~vNv~g~i~Li~a  283 (406)
T PRK07424        254 GINVHGERTPEAINKSYEVNTFSAWRLMEL  283 (406)
T ss_pred             CcCCCCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence            8653323332   23445565544444444

>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=97.04  E-value=0.0066  Score=54.88  Aligned_cols=114  Identities=18%  Similarity=0.313  Sum_probs=64.4

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc--hhHHHHHhcCCCCCeEEEE-eCCCc---HHhhh-------
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGF-LGQPQ---LENAL-------  108 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~--~g~~~dl~~~~~~~~v~~~-~~~~d---~~~al-------  108 (354)
                      .++|+|+||+|.+|..++..|+..|.  +|.++++++.  .....++....  ..+..+ .+-.|   +..++       
T Consensus         5 ~~~ilItGasg~iG~~l~~~l~~~g~--~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~   80 (246)
T PRK05653          5 GKTALVTGASRGIGRAIALRLAADGA--KVVIYDSNEEAAEALAAELRAAG--GEARVLVFDVSDEAAVRALIEAAVEAF   80 (246)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC--EEEEEeCChhHHHHHHHHHHhcC--CceEEEEccCCCHHHHHHHHHHHHHHh
Confidence            36899999999999999999999888  7999998762  22223333221  111111 01111   22222       


Q ss_pred             CCCcEEEEcCCCCCCC---CCCH---HHHHHHHHHHHHHHHHHHhhh---CCCeEEEEec
Q 018512          109 TGMDLVIIPAGVPRKP---GMTR---DDLFNINAGIVRTLCEGIAKC---CPNATVNLIS  159 (354)
Q Consensus       109 ~~aDvVIi~ag~~~~~---g~~r---~d~~~~n~~~~~~i~~~i~~~---~p~a~viv~t  159 (354)
                      ...|.||+++|.....   ..+.   .+.+..|+.....+.+.+..+   .....++++|
T Consensus        81 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~~s  140 (246)
T PRK05653         81 GALDILVNNAGITRDALLPRMSEEDWDRVIDVNLTGTFNVVRAALPPMIKARYGRIVNIS  140 (246)
T ss_pred             CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEC
Confidence            3469999998753221   1122   234556666666665555432   2223455554

>PRK07109 short chain dehydrogenase; Provisional

Probab=97.03  E-value=0.013  Score=56.73  Aligned_cols=114  Identities=14%  Similarity=0.098  Sum_probs=65.6

Q ss_pred             CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCCCCeEEEE-eCCCc---HHhh-------
Q 018512           41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGF-LGQPQ---LENA-------  107 (354)
Q Consensus        41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~~~~v~~~-~~~~d---~~~a-------  107 (354)
                      +.++|+|+||+|.+|..++..|+..|.  +|+++++++  ......++....  ..+..+ .+-+|   .+++       
T Consensus         7 ~~k~vlITGas~gIG~~la~~la~~G~--~Vvl~~R~~~~l~~~~~~l~~~g--~~~~~v~~Dv~d~~~v~~~~~~~~~~   82 (334)
T PRK07109          7 GRQVVVITGASAGVGRATARAFARRGA--KVVLLARGEEGLEALAAEIRAAG--GEALAVVADVADAEAVQAAADRAEEE   82 (334)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHHcC--CcEEEEEecCCCHHHHHHHHHHHHHH
Confidence            345899999999999999999999987  899999875  222333343322  112111 11122   2222       


Q ss_pred             hCCCcEEEEcCCCCCCC---CCCHHH---HHHHH----HHHHHHHHHHHhhhCCCeEEEEec
Q 018512          108 LTGMDLVIIPAGVPRKP---GMTRDD---LFNIN----AGIVRTLCEGIAKCCPNATVNLIS  159 (354)
Q Consensus       108 l~~aDvVIi~ag~~~~~---g~~r~d---~~~~n----~~~~~~i~~~i~~~~p~a~viv~t  159 (354)
                      +...|++|+.+|.....   ..+..+   .+..|    +...+.+.+.+++.. .+.||++|
T Consensus        83 ~g~iD~lInnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~~-~g~iV~is  143 (334)
T PRK07109         83 LGPIDTWVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPRD-RGAIIQVG  143 (334)
T ss_pred             CCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEeC
Confidence            23689999998864211   112222   22333    445556666666543 35556554

>TIGR02415 23BDH acetoin reductases

Probab=97.02  E-value=0.011  Score=53.99  Aligned_cols=112  Identities=16%  Similarity=0.271  Sum_probs=64.4

Q ss_pred             eEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCCCCeEEEEe-CCCc---HHhh-------hCC
Q 018512           44 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQ---LENA-------LTG  110 (354)
Q Consensus        44 kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~~~~v~~~~-~~~d---~~~a-------l~~  110 (354)
                      ++.|+||+|.+|..++..|+..|.  +|++++.+.  ......++....  ..+..+. +-+|   +.++       +..
T Consensus         2 ~~lItG~sg~iG~~la~~l~~~G~--~v~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~   77 (254)
T TIGR02415         2 VALVTGGAQGIGKGIAERLAKDGF--AVAVADLNEETAKETAKEINQAG--GKAVAYKLDVSDKDQVFSAIDQAAEKFGG   77 (254)
T ss_pred             EEEEeCCCchHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcC--CeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            689999999999999999999887  899999875  222223333322  1122211 1112   1222       235


Q ss_pred             CcEEEEcCCCCCCC---CCCHH---HHHHHHHH----HHHHHHHHHhhhCCCeEEEEec
Q 018512          111 MDLVIIPAGVPRKP---GMTRD---DLFNINAG----IVRTLCEGIAKCCPNATVNLIS  159 (354)
Q Consensus       111 aDvVIi~ag~~~~~---g~~r~---d~~~~n~~----~~~~i~~~i~~~~p~a~viv~t  159 (354)
                      .|+||+++|.....   +.+..   ..+..|+.    .++.+.+.+++....+.++++|
T Consensus        78 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~s  136 (254)
T TIGR02415        78 FDVMVNNAGVAPITPILEITEEELKKVYNVNVKGVLFGIQAAARQFKKQGHGGKIINAA  136 (254)
T ss_pred             CCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEec
Confidence            79999998864211   22222   23445554    3345555665555456666554

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).

>PRK07478 short chain dehydrogenase; Provisional

Probab=97.02  E-value=0.018  Score=52.86  Aligned_cols=147  Identities=16%  Similarity=0.155  Sum_probs=81.3

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCCCCeEEEE-eCCCc---HHhhh-------
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGF-LGQPQ---LENAL-------  108 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~~~~v~~~-~~~~d---~~~al-------  108 (354)
                      .+++.|+||+|.+|..++..|+..|.  +|++.++++  ......++.+..  ..+..+ .+-.+   .++++       
T Consensus         6 ~k~~lItGas~giG~~ia~~l~~~G~--~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~   81 (254)
T PRK07478          6 GKVAIITGASSGIGRAAAKLFAREGA--KVVVGARRQAELDQLVAEIRAEG--GEAVALAGDVRDEAYAKALVALAVERF   81 (254)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcC--CcEEEEEcCCCCHHHHHHHHHHHHHhc
Confidence            35899999999999999999999888  899999875  222333443322  112211 11112   22222       


Q ss_pred             CCCcEEEEcCCCCC--CC--CCCH---HHHHHHHHH----HHHHHHHHHhhhCCCeEEEEecCCCCCchHHHHHHHHHhC
Q 018512          109 TGMDLVIIPAGVPR--KP--GMTR---DDLFNINAG----IVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAG  177 (354)
Q Consensus       109 ~~aDvVIi~ag~~~--~~--g~~r---~d~~~~n~~----~~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~~~~~~~~  177 (354)
                      ...|++|+.||...  .+  ..+.   ...+..|+.    ..+.+.+.+++.. .+.|+++|......           .
T Consensus        82 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~-~~~iv~~sS~~~~~-----------~  149 (254)
T PRK07478         82 GGLDIAFNNAGTLGEMGPVAEMSLEGWRETLATNLTSAFLGAKHQIPAMLARG-GGSLIFTSTFVGHT-----------A  149 (254)
T ss_pred             CCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CceEEEEechHhhc-----------c
Confidence            36899999998632  11  1222   234556664    4445555655443 34555555321110           1


Q ss_pred             CCCCCCEEEeccchHHHHHHHHHHHhC
Q 018512          178 TYDPKKLLGVTMLDVVRANTFVAEVLG  204 (354)
Q Consensus       178 ~~p~~kviG~t~ld~~r~~~~la~~l~  204 (354)
                      +.|..-.++.+......+...+++.++
T Consensus       150 ~~~~~~~Y~~sK~a~~~~~~~la~e~~  176 (254)
T PRK07478        150 GFPGMAAYAASKAGLIGLTQVLAAEYG  176 (254)
T ss_pred             CCCCcchhHHHHHHHHHHHHHHHHHHh
Confidence            233333455554444556677777664

>TIGR01505 tartro_sem_red 2-hydroxy-3-oxopropionate reductase

Probab=97.02  E-value=0.0031  Score=59.73  Aligned_cols=63  Identities=14%  Similarity=0.246  Sum_probs=46.4

Q ss_pred             eEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcC
Q 018512           44 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA  118 (354)
Q Consensus        44 kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~a  118 (354)
                      ||+|||. |.+|+.++..|+..|+  +|.++|+++..  ...+.....    .   ...+..+++++||+||++.
T Consensus         1 ~IgvIG~-G~mG~~iA~~l~~~G~--~V~~~dr~~~~--~~~~~~~g~----~---~~~~~~~~~~~aDivi~~v   63 (291)
T TIGR01505         1 KVGFIGL-GIMGSPMSINLAKAGY--QLHVTTIGPEV--ADELLAAGA----V---TAETARQVTEQADVIFTMV   63 (291)
T ss_pred             CEEEEEe-cHHHHHHHHHHHHCCC--eEEEEcCCHHH--HHHHHHCCC----c---ccCCHHHHHhcCCEEEEec
Confidence            6999999 9999999999998887  89999987521  122232221    1   1234568899999999984

This model represents 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60), also called tartronate semialdehyde reductase. It follows glyoxylate carboligase and precedes glycerate kinase in D-glycerate pathway of glyoxylate degradation. The eventual product, 3-phosphoglycerate, is an intermediate of glycolysis and is readily metabolized. Tartronic semialdehyde, the substrate of this enzyme, may also come from other pathways, such as D-glucarate catabolism.

>PRK11559 garR tartronate semialdehyde reductase; Provisional

Probab=97.02  E-value=0.0038  Score=59.26  Aligned_cols=64  Identities=19%  Similarity=0.273  Sum_probs=46.9

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcC
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA  118 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~a  118 (354)
                      |||+|||. |.+|+.++..|...+.  +|.++|+++...  ..+....    +..   ..++++++++||+||++.
T Consensus         3 ~~IgviG~-G~mG~~~a~~l~~~g~--~v~~~d~~~~~~--~~~~~~g----~~~---~~~~~e~~~~~d~vi~~v   66 (296)
T PRK11559          3 MKVGFIGL-GIMGKPMSKNLLKAGY--SLVVYDRNPEAV--AEVIAAG----AET---ASTAKAVAEQCDVIITML   66 (296)
T ss_pred             ceEEEEcc-CHHHHHHHHHHHHCCC--eEEEEcCCHHHH--HHHHHCC----Cee---cCCHHHHHhcCCEEEEeC
Confidence            68999999 9999999999998887  899999876221  1122211    111   235678889999999984

>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=97.02  E-value=0.021  Score=51.66  Aligned_cols=115  Identities=21%  Similarity=0.300  Sum_probs=65.2

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc---hhHHHHHhcCCCCCeEEEEe-CCCc---HHhh-------
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT---PGVTADISHMDTGAVVRGFL-GQPQ---LENA-------  107 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~---~g~~~dl~~~~~~~~v~~~~-~~~d---~~~a-------  107 (354)
                      .++|+|+||+|++|+.++..|+..|.  +|++...+..   .....++....  ..+..+. +-.+   +.++       
T Consensus         5 ~~~vlItG~sg~iG~~l~~~l~~~G~--~v~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~~~   80 (248)
T PRK05557          5 GKVALVTGASRGIGRAIAERLAAQGA--NVVINYASSEAGAEALVAEIGALG--GKALAVQGDVSDAESVERAVDEAKAE   80 (248)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCC--EEEEEeCCchhHHHHHHHHHHhcC--CceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            46899999999999999999999887  7766665542   12222232221  1111110 1112   2222       


Q ss_pred             hCCCcEEEEcCCCCCCC---CCCH---HHHHHHHHHHHHHHHHHHhhhC---CCeEEEEecC
Q 018512          108 LTGMDLVIIPAGVPRKP---GMTR---DDLFNINAGIVRTLCEGIAKCC---PNATVNLISN  160 (354)
Q Consensus       108 l~~aDvVIi~ag~~~~~---g~~r---~d~~~~n~~~~~~i~~~i~~~~---p~a~viv~tN  160 (354)
                      +.+.|.||+++|.....   ..+.   ...+..|+.....+.+.+.++.   ..+.++++|.
T Consensus        81 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~iss  142 (248)
T PRK05557         81 FGGVDILVNNAGITRDNLLMRMKEEDWDRVIDTNLTGVFNLTKAVARPMMKQRSGRIINISS  142 (248)
T ss_pred             cCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcc
Confidence            24689999998864321   1122   2234567777667777666543   2345555553

>PRK06545 prephenate dehydrogenase; Validated

Probab=97.02  E-value=0.0046  Score=60.55  Aligned_cols=68  Identities=21%  Similarity=0.243  Sum_probs=46.4

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcC
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA  118 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~a  118 (354)
                      .||+|||. |.+|.+++..|...++  ++.++|.+..............   ...  .++++.+++++||+||++.
T Consensus         1 ~~I~iIG~-GliG~siA~~L~~~G~--~v~i~~~~~~~~~~~~a~~~~~---~~~--~~~~~~~~~~~aDlVilav   68 (359)
T PRK06545          1 RTVLIVGL-GLIGGSLALAIKAAGP--DVFIIGYDPSAAQLARALGFGV---IDE--LAADLQRAAAEADLIVLAV   68 (359)
T ss_pred             CeEEEEEe-CHHHHHHHHHHHhcCC--CeEEEEeCCCHHHHHHHhcCCC---Ccc--cccCHHHHhcCCCEEEEeC
Confidence            37999999 9999999999999887  7788888763211111111111   111  1245678899999999984

>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.01  E-value=0.014  Score=53.18  Aligned_cols=147  Identities=10%  Similarity=0.016  Sum_probs=77.0

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEE----eCCCcHHhhhC-------C
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGF----LGQPQLENALT-------G  110 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~----~~~~d~~~al~-------~  110 (354)
                      .++|.|+||+|.+|++++..|+..|.  +|++.+.+... ...++.+... ..+..+    ....++.++++       .
T Consensus         5 ~k~ilItGas~gIG~~la~~l~~~G~--~vv~~~~~~~~-~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   80 (253)
T PRK08642          5 EQTVLVTGGSRGLGAAIARAFAREGA--RVVVNYHQSED-AAEALADELG-DRAIALQADVTDREQVQAMFATATEHFGK   80 (253)
T ss_pred             CCEEEEeCCCCcHHHHHHHHHHHCCC--eEEEEcCCCHH-HHHHHHHHhC-CceEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence            35899999999999999999999887  78776654311 1111111100 111111    11112233332       2


Q ss_pred             -CcEEEEcCCCCCC---------CCCCH---HHHHHHHHHHHHHHHHHHhhh---CCCeEEEEecCCCCCchHHHHHHHH
Q 018512          111 -MDLVIIPAGVPRK---------PGMTR---DDLFNINAGIVRTLCEGIAKC---CPNATVNLISNPVNSTVPIAAEVFK  174 (354)
Q Consensus       111 -aDvVIi~ag~~~~---------~g~~r---~d~~~~n~~~~~~i~~~i~~~---~p~a~viv~tNPv~~~~~~~~~~~~  174 (354)
                       .|++|+.+|....         ...+.   .+.+..|+.....+.+.+.++   ...+.|++++......         
T Consensus        81 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~---------  151 (253)
T PRK08642         81 PITTVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGALNTIQAALPGMREQGFGRIINIGTNLFQN---------  151 (253)
T ss_pred             CCeEEEECCCccccccccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHhcCCeEEEEECCccccC---------
Confidence             8999999875211         11122   233555655555555444321   2245666665432111         


Q ss_pred             HhCCCCCCCEEEeccchHHHHHHHHHHHhC
Q 018512          175 KAGTYDPKKLLGVTMLDVVRANTFVAEVLG  204 (354)
Q Consensus       175 ~~~~~p~~kviG~t~ld~~r~~~~la~~l~  204 (354)
                         ..++.-.++.+.....++.+.+|+.++
T Consensus       152 ---~~~~~~~Y~~sK~a~~~l~~~la~~~~  178 (253)
T PRK08642        152 ---PVVPYHDYTTAKAALLGLTRNLAAELG  178 (253)
T ss_pred             ---CCCCccchHHHHHHHHHHHHHHHHHhC
Confidence               122223466665556667777787765

>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

Probab=97.01  E-value=0.012  Score=54.08  Aligned_cols=144  Identities=17%  Similarity=0.113  Sum_probs=77.5

Q ss_pred             CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc-hhHHHHHhcCCCCCeEEEE-eCCCc---HHhh-------h
Q 018512           41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT-PGVTADISHMDTGAVVRGF-LGQPQ---LENA-------L  108 (354)
Q Consensus        41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~-~g~~~dl~~~~~~~~v~~~-~~~~d---~~~a-------l  108 (354)
                      +.+++.|+||+|.+|++++..|+..|.  +|+++|+++. .....++....  ..+..+ .+-++   ..++       +
T Consensus         7 ~~k~vlVtGas~gIG~~la~~l~~~G~--~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~   82 (260)
T PRK12823          7 AGKVVVVTGAAQGIGRGVALRAAAEGA--RVVLVDRSELVHEVAAELRAAG--GEALALTADLETYAGAQAAMAAAVEAF   82 (260)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC--EEEEEeCchHHHHHHHHHHhcC--CeEEEEEEeCCCHHHHHHHHHHHHHHc
Confidence            346899999999999999999999987  8999998752 22222332221  111111 11112   2222       2


Q ss_pred             CCCcEEEEcCCCCC--CC--CCCHH---HHHHHHH----HHHHHHHHHHhhhCCCeEEEEecCCCCCchHHHHHHHHHhC
Q 018512          109 TGMDLVIIPAGVPR--KP--GMTRD---DLFNINA----GIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAG  177 (354)
Q Consensus       109 ~~aDvVIi~ag~~~--~~--g~~r~---d~~~~n~----~~~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~~~~~~~~  177 (354)
                      ...|++|+.||...  .+  ..+..   ..+..|+    ...+.+.+.+++... +.|+++|.....             
T Consensus        83 ~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~-g~iv~~sS~~~~-------------  148 (260)
T PRK12823         83 GRIDVLINNVGGTIWAKPFEEYEEEQIEAEIRRSLFPTLWCCRAVLPHMLAQGG-GAIVNVSSIATR-------------  148 (260)
T ss_pred             CCCeEEEECCccccCCCChhhCChHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC-CeEEEEcCcccc-------------
Confidence            46899999987432  11  12222   2234444    344566666655433 455555432110             


Q ss_pred             CCCCCCEEEeccchHHHHHHHHHHHh
Q 018512          178 TYDPKKLLGVTMLDVVRANTFVAEVL  203 (354)
Q Consensus       178 ~~p~~kviG~t~ld~~r~~~~la~~l  203 (354)
                      + +..-.++.+......+.+.++..+
T Consensus       149 ~-~~~~~Y~~sK~a~~~~~~~la~e~  173 (260)
T PRK12823        149 G-INRVPYSAAKGGVNALTASLAFEY  173 (260)
T ss_pred             C-CCCCccHHHHHHHHHHHHHHHHHh
Confidence            0 111235555444455667777766

>PRK08277 D-mannonate oxidoreductase; Provisional

Probab=97.00  E-value=0.019  Score=53.48  Aligned_cols=36  Identities=19%  Similarity=0.232  Sum_probs=32.0

Q ss_pred             CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC
Q 018512           41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   78 (354)
Q Consensus        41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~   78 (354)
                      +.+++.|+||+|.+|+.++..|+..|.  .|+++|++.
T Consensus         9 ~~k~vlVtGas~giG~~ia~~l~~~G~--~V~~~~r~~   44 (278)
T PRK08277          9 KGKVAVITGGGGVLGGAMAKELARAGA--KVAILDRNQ   44 (278)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC--EEEEEeCCH
Confidence            345899999999999999999999888  899999875

>PRK06197 short chain dehydrogenase; Provisional

Probab=96.99  E-value=0.013  Score=55.52  Aligned_cols=117  Identities=21%  Similarity=0.148  Sum_probs=66.7

Q ss_pred             CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCch--hHHHHHhcCCCCCeEEEEe-CCCc---HHhh-------
Q 018512           41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP--GVTADISHMDTGAVVRGFL-GQPQ---LENA-------  107 (354)
Q Consensus        41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~--g~~~dl~~~~~~~~v~~~~-~~~d---~~~a-------  107 (354)
                      +.++|.|+||+|.+|+.++..|+..|.  +|++++++...  ....++........+..+. +-.|   .+++       
T Consensus        15 ~~k~vlItGas~gIG~~~a~~l~~~G~--~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~   92 (306)
T PRK06197         15 SGRVAVVTGANTGLGYETAAALAAKGA--HVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAADALRAA   92 (306)
T ss_pred             CCCEEEEcCCCCcHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHhh
Confidence            446899999999999999999999887  89999987522  1222333211111222211 1112   1222       


Q ss_pred             hCCCcEEEEcCCCCCCCC-C---CHHHHHHHHHHH----HHHHHHHHhhhCCCeEEEEecC
Q 018512          108 LTGMDLVIIPAGVPRKPG-M---TRDDLFNINAGI----VRTLCEGIAKCCPNATVNLISN  160 (354)
Q Consensus       108 l~~aDvVIi~ag~~~~~g-~---~r~d~~~~n~~~----~~~i~~~i~~~~p~a~viv~tN  160 (354)
                      +...|+||+.||...... .   .....+..|+..    .+.+.+.+++.. .+.|+++|.
T Consensus        93 ~~~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~-~~~iV~vSS  152 (306)
T PRK06197         93 YPRIDLLINNAGVMYTPKQTTADGFELQFGTNHLGHFALTGLLLDRLLPVP-GSRVVTVSS  152 (306)
T ss_pred             CCCCCEEEECCccccCCCccCCCCcchhhhhhhHHHHHHHHHHHHHHhhCC-CCEEEEECC
Confidence            236899999998632211 1   112234555544    666777666543 345565553

>PRK06500 short chain dehydrogenase; Provisional

Probab=96.99  E-value=0.012  Score=53.47  Aligned_cols=101  Identities=20%  Similarity=0.189  Sum_probs=62.0

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc--hhHHHHHhcCCCCCeEEEE-eCCCcH----------Hhhh
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGF-LGQPQL----------ENAL  108 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~--~g~~~dl~~~~~~~~v~~~-~~~~d~----------~~al  108 (354)
                      .++|.|+||+|.+|+.++..|+..|.  +|++++++..  .....++   .  ..+..+ .+..+.          .+.+
T Consensus         6 ~k~vlItGasg~iG~~la~~l~~~g~--~v~~~~r~~~~~~~~~~~~---~--~~~~~~~~D~~~~~~~~~~~~~~~~~~   78 (249)
T PRK06500          6 GKTALITGGTSGIGLETARQFLAEGA--RVAITGRDPASLEAARAEL---G--ESALVIRADAGDVAAQKALAQALAEAF   78 (249)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCC--EEEEecCCHHHHHHHHHHh---C--CceEEEEecCCCHHHHHHHHHHHHHHh
Confidence            45899999999999999999999987  8999998752  1111111   1  111111 111121          1223


Q ss_pred             CCCcEEEEcCCCCCCCC---CCH---HHHHHHHHHHHHHHHHHHhhh
Q 018512          109 TGMDLVIIPAGVPRKPG---MTR---DDLFNINAGIVRTLCEGIAKC  149 (354)
Q Consensus       109 ~~aDvVIi~ag~~~~~g---~~r---~d~~~~n~~~~~~i~~~i~~~  149 (354)
                      ...|+||+.+|......   .+.   ...+..|+.....+.+.+.++
T Consensus        79 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~  125 (249)
T PRK06500         79 GRLDAVFINAGVAKFAPLEDWDEAMFDRSFNTNVKGPYFLIQALLPL  125 (249)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence            57899999988643211   122   234567777777777777653

>PRK06949 short chain dehydrogenase; Provisional

Probab=96.99  E-value=0.0075  Score=55.28  Aligned_cols=37  Identities=19%  Similarity=0.212  Sum_probs=32.5

Q ss_pred             CCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC
Q 018512           40 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   78 (354)
Q Consensus        40 ~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~   78 (354)
                      ...++|.|+||+|.+|++++..|+..|.  +|++.+++.
T Consensus         7 ~~~k~ilItGasg~IG~~~a~~l~~~G~--~Vi~~~r~~   43 (258)
T PRK06949          7 LEGKVALVTGASSGLGARFAQVLAQAGA--KVVLASRRV   43 (258)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCC--EEEEEeCCH
Confidence            3456999999999999999999998887  899999875

>PRK05993 short chain dehydrogenase; Provisional

Probab=96.99  E-value=0.0072  Score=56.50  Aligned_cols=112  Identities=12%  Similarity=0.062  Sum_probs=64.6

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEE-EeCCCcHHhhh--------CCCcE
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRG-FLGQPQLENAL--------TGMDL  113 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~-~~~~~d~~~al--------~~aDv  113 (354)
                      ++|.|+||+|.+|..++..|+..|.  +|++.+++...  ..++..... ..+.. +....+++.++        ...|+
T Consensus         5 k~vlItGasggiG~~la~~l~~~G~--~Vi~~~r~~~~--~~~l~~~~~-~~~~~Dl~d~~~~~~~~~~~~~~~~g~id~   79 (277)
T PRK05993          5 RSILITGCSSGIGAYCARALQSDGW--RVFATCRKEED--VAALEAEGL-EAFQLDYAEPESIAALVAQVLELSGGRLDA   79 (277)
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEECCHHH--HHHHHHCCc-eEEEccCCCHHHHHHHHHHHHHHcCCCccE
Confidence            4799999999999999999999887  89999987521  112222111 01111 11111122222        24699


Q ss_pred             EEEcCCCCCCC---CCC---HHHHHHHHHHH----HHHHHHHHhhhCCCeEEEEecC
Q 018512          114 VIIPAGVPRKP---GMT---RDDLFNINAGI----VRTLCEGIAKCCPNATVNLISN  160 (354)
Q Consensus       114 VIi~ag~~~~~---g~~---r~d~~~~n~~~----~~~i~~~i~~~~p~a~viv~tN  160 (354)
                      ||+.||.....   ..+   ....+..|+..    .+.+.+.+++... +.|+++|.
T Consensus        80 li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~~~-g~iv~isS  135 (277)
T PRK05993         80 LFNNGAYGQPGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQGQ-GRIVQCSS  135 (277)
T ss_pred             EEECCCcCCCCCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhcCC-CEEEEECC
Confidence            99998864321   112   22345566655    6667777765543 44555553

>PRK08628 short chain dehydrogenase; Provisional

Probab=96.99  E-value=0.026  Score=51.86  Aligned_cols=115  Identities=13%  Similarity=0.122  Sum_probs=65.4

Q ss_pred             CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc-hhHHHHHhcCCCCCeEEEE-eCCCc---HHhhh-------
Q 018512           41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT-PGVTADISHMDTGAVVRGF-LGQPQ---LENAL-------  108 (354)
Q Consensus        41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~-~g~~~dl~~~~~~~~v~~~-~~~~d---~~~al-------  108 (354)
                      +..+|.|+||+|.+|..++..|+..|.  .+++.++++. .....++....  ..+..+ .+-++   +..++       
T Consensus         6 ~~~~ilItGasggiG~~la~~l~~~G~--~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~   81 (258)
T PRK08628          6 KDKVVIVTGGASGIGAAISLRLAEEGA--IPVIFGRSAPDDEFAEELRALQ--PRAEFVQVDLTDDAQCRDAVEQTVAKF   81 (258)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCC--cEEEEcCChhhHHHHHHHHhcC--CceEEEEccCCCHHHHHHHHHHHHHhc
Confidence            345899999999999999999999887  7888888762 22223333222  112221 11112   22333       


Q ss_pred             CCCcEEEEcCCCCCCCC--C---CHHHHHHHHHHHHHHHHHHHhhhC--CCeEEEEec
Q 018512          109 TGMDLVIIPAGVPRKPG--M---TRDDLFNINAGIVRTLCEGIAKCC--PNATVNLIS  159 (354)
Q Consensus       109 ~~aDvVIi~ag~~~~~g--~---~r~d~~~~n~~~~~~i~~~i~~~~--p~a~viv~t  159 (354)
                      ...|+||+++|......  .   +..+.+..|+.....+.+.+.++.  ..+.++++|
T Consensus        82 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~s  139 (258)
T PRK08628         82 GRIDGLVNNAGVNDGVGLEAGREAFVASLERNLIHYYVMAHYCLPHLKASRGAIVNIS  139 (258)
T ss_pred             CCCCEEEECCcccCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhhccCcEEEEEC
Confidence            36799999998643222  1   122345667665555555544322  234455444

>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.99  E-value=0.012  Score=53.42  Aligned_cols=103  Identities=21%  Similarity=0.288  Sum_probs=59.0

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEE-ecCCc--hhHHHHHhcCCCCCeEEEEe-CCCc---HHhhhC-----
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLY-DVVNT--PGVTADISHMDTGAVVRGFL-GQPQ---LENALT-----  109 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~-D~~~~--~g~~~dl~~~~~~~~v~~~~-~~~d---~~~al~-----  109 (354)
                      +++|.|+||+|.+|..++..|+..|.  ++++. +++..  ......+....  ..+.... +-.+   +.+.++     
T Consensus         5 ~~~ilI~Gasg~iG~~la~~l~~~g~--~v~~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~   80 (247)
T PRK05565          5 GKVAIVTGASGGIGRAIAELLAKEGA--KVVIAYDINEEAAQELLEEIKEEG--GDAIAVKADVSSEEDVENLVEQIVEK   80 (247)
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEcCCCHHHHHHHHHHHHhcC--CeEEEEECCCCCHHHHHHHHHHHHHH
Confidence            45899999999999999999998887  77777 88652  11222232211  1222211 1112   222232     


Q ss_pred             --CCcEEEEcCCCCCCC---CCCH---HHHHHHHHHHHHHHHHHHhh
Q 018512          110 --GMDLVIIPAGVPRKP---GMTR---DDLFNINAGIVRTLCEGIAK  148 (354)
Q Consensus       110 --~aDvVIi~ag~~~~~---g~~r---~d~~~~n~~~~~~i~~~i~~  148 (354)
                        +.|+||+.+|.....   ..+.   ...+..|......+.+.+..
T Consensus        81 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~  127 (247)
T PRK05565         81 FGKIDILVNNAGISNFGLVTDMTDEEWDRVIDVNLTGVMLLTRYALP  127 (247)
T ss_pred             hCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence              789999998865211   1122   23455677665555555443

>COG0677 WecC UDP-N-acetyl-D-mannosaminuronate dehydrogenase [Cell envelope biogenesis, outer membrane]

Probab=96.98  E-value=0.0091  Score=58.35  Aligned_cols=124  Identities=17%  Similarity=0.225  Sum_probs=75.3

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc------hhHH----HHHh----cCCCCCeEEEEeCCCcHHhh
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT------PGVT----ADIS----HMDTGAVVRGFLGQPQLENA  107 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~------~g~~----~dl~----~~~~~~~v~~~~~~~d~~~a  107 (354)
                      .++|+|||- |+||..+|..++.+|.  .|+-+|+++.      .|..    .++.    .......++.   |+|. +.
T Consensus         9 ~~~I~ViGL-GYVGLPlA~~fA~~G~--~ViG~DIn~~~Vd~ln~G~~~i~e~~~~~~v~~~v~~g~lra---Ttd~-~~   81 (436)
T COG0677           9 SATIGVIGL-GYVGLPLAAAFASAGF--KVIGVDINQKKVDKLNRGESYIEEPDLDEVVKEAVESGKLRA---TTDP-EE   81 (436)
T ss_pred             ceEEEEEcc-ccccHHHHHHHHHcCC--ceEeEeCCHHHHHHHhCCcceeecCcHHHHHHHHHhcCCceE---ecCh-hh
Confidence            369999999 9999999999999998  8999999861      1110    0111    1111233554   4565 55


Q ss_pred             hCCCcEEEEcCCCCCCCC-CCHHHHHHHHHHHHHHHHHHHhhhCCCe--EEEEecCCCCCchHHHHHHHHHhCCC
Q 018512          108 LTGMDLVIIPAGVPRKPG-MTRDDLFNINAGIVRTLCEGIAKCCPNA--TVNLISNPVNSTVPIAAEVFKKAGTY  179 (354)
Q Consensus       108 l~~aDvVIi~ag~~~~~g-~~r~d~~~~n~~~~~~i~~~i~~~~p~a--~viv~tNPv~~~~~~~~~~~~~~~~~  179 (354)
                      ++.||++|++.-.|.+.. +..+       ..+.+-++.|.++-.++  +|+=.|-|.+..-.++--.+...+|+
T Consensus        82 l~~~dv~iI~VPTPl~~~~~pDl-------s~v~~aa~sIa~~L~kG~LVIlEST~~PGTTe~v~~plle~~sgL  149 (436)
T COG0677          82 LKECDVFIICVPTPLKKYREPDL-------SYVESAARSIAPVLKKGDLVILESTTPPGTTEEVVKPLLEERSGL  149 (436)
T ss_pred             cccCCEEEEEecCCcCCCCCCCh-------HHHHHHHHHHHHhcCCCCEEEEecCCCCCcHHHHHHHHHhhcCCC
Confidence            789999999987775442 2222       34445555555554333  33334778776654432223333444

>PRK07825 short chain dehydrogenase; Provisional

Probab=96.98  E-value=0.019  Score=53.29  Aligned_cols=113  Identities=18%  Similarity=0.139  Sum_probs=63.9

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc--hhHHHHHhcCCCCCeEEE-EeCCCcH-------HhhhCCC
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRG-FLGQPQL-------ENALTGM  111 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~--~g~~~dl~~~~~~~~v~~-~~~~~d~-------~~al~~a  111 (354)
                      .++|.|+||+|.+|..++..|+..|.  .|++.++++.  .....++....   .+.. +....++       .+.+.+.
T Consensus         5 ~~~ilVtGasggiG~~la~~l~~~G~--~v~~~~r~~~~~~~~~~~~~~~~---~~~~D~~~~~~~~~~~~~~~~~~~~i   79 (273)
T PRK07825          5 GKVVAITGGARGIGLATARALAALGA--RVAIGDLDEALAKETAAELGLVV---GGPLDVTDPASFAAFLDAVEADLGPI   79 (273)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHhccce---EEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            35899999999999999999999887  7999998752  21222222110   0110 1011111       2223578


Q ss_pred             cEEEEcCCCCCCCC---CC---HHHHHHHHHHH----HHHHHHHHhhhCCCeEEEEecC
Q 018512          112 DLVIIPAGVPRKPG---MT---RDDLFNINAGI----VRTLCEGIAKCCPNATVNLISN  160 (354)
Q Consensus       112 DvVIi~ag~~~~~g---~~---r~d~~~~n~~~----~~~i~~~i~~~~p~a~viv~tN  160 (354)
                      |++|+.+|......   .+   ....+.-|+..    .+.+.+.+.+.+ .+.|+++|.
T Consensus        80 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~-~g~iv~isS  137 (273)
T PRK07825         80 DVLVNNAGVMPVGPFLDEPDAVTRRILDVNVYGVILGSKLAAPRMVPRG-RGHVVNVAS  137 (273)
T ss_pred             CEEEECCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-CCEEEEEcC
Confidence            99999998643211   11   22344556553    444455554433 455666654

>PRK06198 short chain dehydrogenase; Provisional

Probab=96.98  E-value=0.02  Score=52.63  Aligned_cols=115  Identities=14%  Similarity=0.166  Sum_probs=64.2

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcE-EEEEecCCc--hhHHHHHhcCCCCCeEEEE-eCCCc---HHhh-------
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSV-LHLYDVVNT--PGVTADISHMDTGAVVRGF-LGQPQ---LENA-------  107 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~e-i~L~D~~~~--~g~~~dl~~~~~~~~v~~~-~~~~d---~~~a-------  107 (354)
                      .++|.|+||+|.+|..++..|...|.  + |+++|++..  .....++....  ..+..+ .+-.+   +.++       
T Consensus         6 ~k~vlItGa~g~iG~~la~~l~~~G~--~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~   81 (260)
T PRK06198          6 GKVALVTGGTQGLGAAIARAFAERGA--AGLVICGRNAEKGEAQAAELEALG--AKAVFVQADLSDVEDCRRVVAAADEA   81 (260)
T ss_pred             CcEEEEeCCCchHHHHHHHHHHHCCC--CeEEEEcCCHHHHHHHHHHHHhcC--CeEEEEEccCCCHHHHHHHHHHHHHH
Confidence            45899999999999999999998886  5 999998752  22222332221  122111 11122   2222       


Q ss_pred             hCCCcEEEEcCCCCCCC---CCCHH---HHHHHHHHHHHHH----HHHHhhhCCCeEEEEecC
Q 018512          108 LTGMDLVIIPAGVPRKP---GMTRD---DLFNINAGIVRTL----CEGIAKCCPNATVNLISN  160 (354)
Q Consensus       108 l~~aDvVIi~ag~~~~~---g~~r~---d~~~~n~~~~~~i----~~~i~~~~p~a~viv~tN  160 (354)
                      +.+.|+||+++|.....   ..+..   ..+..|+.....+    .+.+.+....+.++++|.
T Consensus        82 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~ss  144 (260)
T PRK06198         82 FGRLDALVNAAGLTDRGTILDTSPELFDRHFAVNVRAPFFLMQEAIKLMRRRKAEGTIVNIGS  144 (260)
T ss_pred             hCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECC
Confidence            23689999999865321   12222   2345555544444    444444333455665553

>PRK08226 short chain dehydrogenase; Provisional

Probab=96.98  E-value=0.015  Score=53.50  Aligned_cols=115  Identities=21%  Similarity=0.256  Sum_probs=65.0

Q ss_pred             CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC-chhHHHHHhcCCCCCeEEEEe-CCCc---HHhh-------h
Q 018512           41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN-TPGVTADISHMDTGAVVRGFL-GQPQ---LENA-------L  108 (354)
Q Consensus        41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~-~~g~~~dl~~~~~~~~v~~~~-~~~d---~~~a-------l  108 (354)
                      +.+++.|+||+|.+|+.++..|+..|.  +|++++++. ......++....  ..+..+. +-++   +.++       +
T Consensus         5 ~~~~~lItG~s~giG~~la~~l~~~G~--~Vv~~~r~~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~v~~~~~~~~~~~   80 (263)
T PRK08226          5 TGKTALITGALQGIGEGIARVFARHGA--NLILLDISPEIEKLADELCGRG--HRCTAVVADVRDPASVAAAIKRAKEKE   80 (263)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC--EEEEecCCHHHHHHHHHHHHhC--CceEEEECCCCCHHHHHHHHHHHHHHc
Confidence            346899999999999999999999887  899999875 222222232211  1121111 1122   2222       2


Q ss_pred             CCCcEEEEcCCCCCCC---CCC---HHHHHHHHHHHHHHHHHHHhhh---CCCeEEEEec
Q 018512          109 TGMDLVIIPAGVPRKP---GMT---RDDLFNINAGIVRTLCEGIAKC---CPNATVNLIS  159 (354)
Q Consensus       109 ~~aDvVIi~ag~~~~~---g~~---r~d~~~~n~~~~~~i~~~i~~~---~p~a~viv~t  159 (354)
                      ...|+||+.+|.....   ..+   ....+..|+.....+.+.+.++   ...+.++++|
T Consensus        81 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~is  140 (263)
T PRK08226         81 GRIDILVNNAGVCRLGSFLDMSDEDRDFHIDINIKGVWNVTKAVLPEMIARKDGRIVMMS  140 (263)
T ss_pred             CCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEC
Confidence            3579999999863211   111   2234556766655555554432   1234455554

>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]

Probab=96.98  E-value=0.0075  Score=56.30  Aligned_cols=98  Identities=23%  Similarity=0.261  Sum_probs=63.0

Q ss_pred             EEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhC-CCcEEEEcCCCCCC
Q 018512           45 VAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALT-GMDLVIIPAGVPRK  123 (354)
Q Consensus        45 I~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~-~aDvVIi~ag~~~~  123 (354)
                      |+|+||+|+||+++...|...++  +|..+-++.....  ...+..    +...   +.+.+... ++|+||..||.|--
T Consensus         1 IliTGgTGlIG~~L~~~L~~~gh--~v~iltR~~~~~~--~~~~~~----v~~~---~~~~~~~~~~~DavINLAG~~I~   69 (297)
T COG1090           1 ILITGGTGLIGRALTARLRKGGH--QVTILTRRPPKAS--QNLHPN----VTLW---EGLADALTLGIDAVINLAGEPIA   69 (297)
T ss_pred             CeEeccccchhHHHHHHHHhCCC--eEEEEEcCCcchh--hhcCcc----cccc---chhhhcccCCCCEEEECCCCccc
Confidence            68999999999999999999998  8888888763211  111111    1111   11223333 79999999998732


Q ss_pred             ---CCCC-HHHHHHHHHHHHHHHHHHHhhhCCCe
Q 018512          124 ---PGMT-RDDLFNINAGIVRTLCEGIAKCCPNA  153 (354)
Q Consensus       124 ---~g~~-r~d~~~~n~~~~~~i~~~i~~~~p~a  153 (354)
                         +... ......--+...+.+.+.|.+.....
T Consensus        70 ~rrWt~~~K~~i~~SRi~~T~~L~e~I~~~~~~P  103 (297)
T COG1090          70 ERRWTEKQKEEIRQSRINTTEKLVELIAASETKP  103 (297)
T ss_pred             cccCCHHHHHHHHHHHhHHHHHHHHHHHhccCCC
Confidence               3222 23334445777888888888665443

>PRK08339 short chain dehydrogenase; Provisional

Probab=96.97  E-value=0.056  Score=50.16  Aligned_cols=114  Identities=13%  Similarity=0.124  Sum_probs=66.5

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCCCCeEEEE----eCCCcHHhhh------CC
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGF----LGQPQLENAL------TG  110 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~~~~v~~~----~~~~d~~~al------~~  110 (354)
                      +.+.|+||+|.+|..++..|+..|.  +|++.|++.  ......++.... ...+..+    ....+.++.+      ..
T Consensus         9 k~~lItGas~gIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~i~~~~~~~~~~g~   85 (263)
T PRK08339          9 KLAFTTASSKGIGFGVARVLARAGA--DVILLSRNEENLKKAREKIKSES-NVDVSYIVADLTKREDLERTVKELKNIGE   85 (263)
T ss_pred             CEEEEeCCCCcHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhhc-CCceEEEEecCCCHHHHHHHHHHHHhhCC
Confidence            4789999999999999999999997  899999875  222233333211 1112211    1111222222      35


Q ss_pred             CcEEEEcCCCCCCC---CCCHH---HHHHHH----HHHHHHHHHHHhhhCCCeEEEEecC
Q 018512          111 MDLVIIPAGVPRKP---GMTRD---DLFNIN----AGIVRTLCEGIAKCCPNATVNLISN  160 (354)
Q Consensus       111 aDvVIi~ag~~~~~---g~~r~---d~~~~n----~~~~~~i~~~i~~~~p~a~viv~tN  160 (354)
                      .|++|+.+|.....   ..+..   ..+.-|    +...+.+.+.+++.. .+.||++|.
T Consensus        86 iD~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~~-~g~Ii~isS  144 (263)
T PRK08339         86 PDIFFFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERKG-FGRIIYSTS  144 (263)
T ss_pred             CcEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEEcC
Confidence            89999999865321   12222   223344    445667777776543 456666654

>PF11975 Glyco_hydro_4C: Family 4 glycosyl hydrolase C-terminal domain; InterPro: IPR022616 This domain is found primarily in bacterial family 4 glycosyl hydrolases

Probab=96.97  E-value=0.0056  Score=56.23  Aligned_cols=78  Identities=10%  Similarity=0.062  Sum_probs=52.4

Q ss_pred             CcchhhHHHHHHHHHHHHHhccCCCCcEEEeee-eeccC---CCccEEEEeEEEcCCCeEEeccCCCCCHHHHHHHHHHH
Q 018512          263 GSATLSMAYAAVKFADACLRGLRGDAGVVECAF-VASQV---TELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAK  338 (354)
Q Consensus       263 g~~~~s~A~a~~~ii~si~~~~~~~~~v~~~~~-~~g~~---~~~~~~svPv~ig~~Gv~~i~~~~~L~~~E~~~l~~sa  338 (354)
                      ++..|+  .   .++++|.+|.+   .++.+++ .+|.+   |+|.++++||+|+++|+.++.. ++|++...++++...
T Consensus       134 ~~~~~a--~---~~i~~i~~~~~---~~~~vNv~N~G~I~nLp~davVEvp~~v~~~Gi~P~~~-g~lP~~~~~li~~~~  204 (232)
T PF11975_consen  134 GSGEYA--E---AAIEAIYNDKP---KRFVVNVPNNGAIPNLPDDAVVEVPCYVDGDGIHPVAV-GPLPPAIAGLIQQVK  204 (232)
T ss_dssp             TTSCHH--H---HHHHHHHHSSE---EEEEEEEE-TTSSTTS-TTSEEEEEEEEETTEEEEB-S-B---HHHHHHHHHHH
T ss_pred             cccchH--H---HHHHHHhcCCC---eEEEEECCCCCccCCCCCCcEEEEEEEEcCCeeEeccC-CCCCHHHHHHHHHHH
Confidence            455555  3   44555577754   3555654 47876   8899999999999999999766 699999999888876


Q ss_pred             HHHHHHHHHhh
Q 018512          339 KELAGSIQKGI  349 (354)
Q Consensus       339 ~~i~~~~~~~~  349 (354)
                      ..-+-.++.++
T Consensus       205 ~~e~L~veAa~  215 (232)
T PF11975_consen  205 AYERLTVEAAL  215 (232)
T ss_dssp             HHHHHHHHHHH
T ss_pred             HHHHHHHHHHH
Confidence            66666665554

It is found in the C terminus. ; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds; PDB: 1UP4_A 1UP6_C 1UP7_E 1VJT_A 1U8X_X 1S6Y_A 3FEF_D 1OBB_A.

>PRK08263 short chain dehydrogenase; Provisional

Probab=96.95  E-value=0.0051  Score=57.37  Aligned_cols=111  Identities=15%  Similarity=0.014  Sum_probs=62.5

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEE-eCCCc---HHhh-------hCCC
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGF-LGQPQ---LENA-------LTGM  111 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~-~~~~d---~~~a-------l~~a  111 (354)
                      ++|.|+||+|.+|++++..|+..|.  +|++.+++....  .++.+... ..+..+ .+-++   +.+.       +...
T Consensus         4 k~vlItGasg~iG~~~a~~l~~~g~--~V~~~~r~~~~~--~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   78 (275)
T PRK08263          4 KVWFITGASRGFGRAWTEAALERGD--RVVATARDTATL--ADLAEKYG-DRLLPLALDVTDRAAVFAAVETAVEHFGRL   78 (275)
T ss_pred             CEEEEeCCCChHHHHHHHHHHHCCC--EEEEEECCHHHH--HHHHHhcc-CCeeEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            4799999999999999999999887  899999875211  11111100 011111 01112   1122       2467


Q ss_pred             cEEEEcCCCCCCCC---CC---HHHHHHHHHHH----HHHHHHHHhhhCCCeEEEEec
Q 018512          112 DLVIIPAGVPRKPG---MT---RDDLFNINAGI----VRTLCEGIAKCCPNATVNLIS  159 (354)
Q Consensus       112 DvVIi~ag~~~~~g---~~---r~d~~~~n~~~----~~~i~~~i~~~~p~a~viv~t  159 (354)
                      |.||+++|......   .+   ....+..|+..    .+.+.+.+++.... .++++|
T Consensus        79 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~-~iv~vs  135 (275)
T PRK08263         79 DIVVNNAGYGLFGMIEEVTESEARAQIDTNFFGALWVTQAVLPYLREQRSG-HIIQIS  135 (275)
T ss_pred             CEEEECCCCccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCC-EEEEEc
Confidence            99999998753211   12   23345566655    45555555555444 444444

>PRK06398 aldose dehydrogenase; Validated

Probab=96.95  E-value=0.015  Score=53.85  Aligned_cols=148  Identities=13%  Similarity=0.136  Sum_probs=80.2

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEE-EeCCCcHHhh-------hCCCcE
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRG-FLGQPQLENA-------LTGMDL  113 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~-~~~~~d~~~a-------l~~aDv  113 (354)
                      .+++.|+||+|.+|.+++..|+..|.  +|+++|++.....     ..   ..+.. .....+.+++       +...|+
T Consensus         6 gk~vlItGas~gIG~~ia~~l~~~G~--~Vi~~~r~~~~~~-----~~---~~~~~D~~~~~~i~~~~~~~~~~~~~id~   75 (258)
T PRK06398          6 DKVAIVTGGSQGIGKAVVNRLKEEGS--NVINFDIKEPSYN-----DV---DYFKVDVSNKEQVIKGIDYVISKYGRIDI   75 (258)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCC--eEEEEeCCccccC-----ce---EEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            45899999999999999999999987  8999998652110     00   00000 0011122222       346899


Q ss_pred             EEEcCCCCCCC---CCCH---HHHHHHHHHHH----HHHHHHHhhhCCCeEEEEecCCCCCchHHHHHHHHHhCCCCCCC
Q 018512          114 VIIPAGVPRKP---GMTR---DDLFNINAGIV----RTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKK  183 (354)
Q Consensus       114 VIi~ag~~~~~---g~~r---~d~~~~n~~~~----~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~~~~~~~~~~p~~k  183 (354)
                      +|+.||.....   ..+.   ...+..|+...    +.+.+.+++. ..+.|+++|.-...            .+.|..-
T Consensus        76 li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~g~iv~isS~~~~------------~~~~~~~  142 (258)
T PRK06398         76 LVNNAGIESYGAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLKQ-DKGVIINIASVQSF------------AVTRNAA  142 (258)
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCeEEEEeCcchhc------------cCCCCCc
Confidence            99999864321   1122   23345565544    4444444433 34566666532111            1233334


Q ss_pred             EEEeccchHHHHHHHHHHHhCCCCCCCcceEE
Q 018512          184 LLGVTMLDVVRANTFVAEVLGLDPRDVDVPVV  215 (354)
Q Consensus       184 viG~t~ld~~r~~~~la~~l~v~~~~v~~~v~  215 (354)
                      .++.+......+.+.++..++  +. |++..+
T Consensus       143 ~Y~~sKaal~~~~~~la~e~~--~~-i~vn~i  171 (258)
T PRK06398        143 AYVTSKHAVLGLTRSIAVDYA--PT-IRCVAV  171 (258)
T ss_pred             hhhhhHHHHHHHHHHHHHHhC--CC-CEEEEE
Confidence            455544334456677777664  22 544444

>PRK12549 shikimate 5-dehydrogenase; Reviewed

Probab=96.95  E-value=0.0051  Score=58.33  Aligned_cols=72  Identities=22%  Similarity=0.295  Sum_probs=51.1

Q ss_pred             CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEc
Q 018512           41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIP  117 (354)
Q Consensus        41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~  117 (354)
                      +..||+|+|+ |.+|.+++..|...|. .+|.++|++.  ++..+.++.+..  +..... ...+++++++++|+||.+
T Consensus       126 ~~k~vlIlGa-GGaaraia~aL~~~G~-~~I~I~nR~~~ka~~la~~l~~~~--~~~~~~-~~~~~~~~~~~aDiVIna  199 (284)
T PRK12549        126 SLERVVQLGA-GGAGAAVAHALLTLGV-ERLTIFDVDPARAAALADELNARF--PAARAT-AGSDLAAALAAADGLVHA  199 (284)
T ss_pred             cCCEEEEECC-cHHHHHHHHHHHHcCC-CEEEEECCCHHHHHHHHHHHHhhC--CCeEEE-eccchHhhhCCCCEEEEC
Confidence            4468999999 9999999999998885 4799999986  344455554432  112221 123445678999999997

>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

Probab=96.95  E-value=0.013  Score=62.19  Aligned_cols=117  Identities=21%  Similarity=0.263  Sum_probs=65.3

Q ss_pred             CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCCCCeEEEE-eCCC---cHHhhhC-----
Q 018512           41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGF-LGQP---QLENALT-----  109 (354)
Q Consensus        41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~~~~v~~~-~~~~---d~~~al~-----  109 (354)
                      ..++|.|+||+|.+|..++..|+..|.  +|++.|++.  ......++........+..+ .+-+   +..++++     
T Consensus       413 ~gkvvLVTGasggIG~aiA~~La~~Ga--~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i~~~  490 (676)
T TIGR02632       413 ARRVAFVTGGAGGIGRETARRLAAEGA--HVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFADVALA  490 (676)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHhCCC--EEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHHHHHh
Confidence            346899999999999999999999887  899999875  22222333211100111111 1111   2233333     


Q ss_pred             --CCcEEEEcCCCCCCC---CCCHHH---HHHHHHH----HHHHHHHHHhhhCCCeEEEEec
Q 018512          110 --GMDLVIIPAGVPRKP---GMTRDD---LFNINAG----IVRTLCEGIAKCCPNATVNLIS  159 (354)
Q Consensus       110 --~aDvVIi~ag~~~~~---g~~r~d---~~~~n~~----~~~~i~~~i~~~~p~a~viv~t  159 (354)
                        +.|+||++||.....   ..+..+   .+..|+.    ..+...+.+++.+..+.|+++|
T Consensus       491 ~g~iDilV~nAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~al~~m~~~~~~g~IV~iS  552 (676)
T TIGR02632       491 YGGVDIVVNNAGIATSSPFEETTLQEWQLNLDILATGYFLVAREAFRQMREQGLGGNIVFIA  552 (676)
T ss_pred             cCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEe
Confidence              689999999864321   112111   2223332    3445566666554445555544

>PRK07985 oxidoreductase; Provisional

Probab=96.95  E-value=0.041  Score=52.10  Aligned_cols=117  Identities=18%  Similarity=0.140  Sum_probs=67.0

Q ss_pred             CCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc----hhHHHHHhcCCCCCeEEEE-eCCCcH----------
Q 018512           40 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT----PGVTADISHMDTGAVVRGF-LGQPQL----------  104 (354)
Q Consensus        40 ~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~----~g~~~dl~~~~~~~~v~~~-~~~~d~----------  104 (354)
                      .+.+++.|+||+|.+|.+++..|+..|.  +|++.+++..    ......+....  ..+..+ .+-++.          
T Consensus        47 ~~~k~vlITGas~gIG~aia~~L~~~G~--~Vi~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~~~~~~~~~  122 (294)
T PRK07985         47 LKDRKALVTGGDSGIGRAAAIAYAREGA--DVAISYLPVEEEDAQDVKKIIEECG--RKAVLLPGDLSDEKFARSLVHEA  122 (294)
T ss_pred             cCCCEEEEECCCCcHHHHHHHHHHHCCC--EEEEecCCcchhhHHHHHHHHHHcC--CeEEEEEccCCCHHHHHHHHHHH
Confidence            3446899999999999999999999987  8888876531    11111122211  112111 111221          


Q ss_pred             HhhhCCCcEEEEcCCCCCC--C--CCCH---HHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecC
Q 018512          105 ENALTGMDLVIIPAGVPRK--P--GMTR---DDLFNINAGIVRTLCEGIAKCC-PNATVNLISN  160 (354)
Q Consensus       105 ~~al~~aDvVIi~ag~~~~--~--g~~r---~d~~~~n~~~~~~i~~~i~~~~-p~a~viv~tN  160 (354)
                      .+.+...|++|+.+|....  +  ..+.   ...+..|+.....+.+.+..+- ..+.||++|.
T Consensus       123 ~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~iSS  186 (294)
T PRK07985        123 HKALGGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKGASIITTSS  186 (294)
T ss_pred             HHHhCCCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcCCEEEEECC
Confidence            1223567999999886321  1  1222   2345667766656665555432 3466776664

>PRK12480 D-lactate dehydrogenase; Provisional

Probab=96.95  E-value=0.0055  Score=59.39  Aligned_cols=63  Identities=21%  Similarity=0.338  Sum_probs=47.1

Q ss_pred             CCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcC
Q 018512           40 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA  118 (354)
Q Consensus        40 ~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~a  118 (354)
                      -..++|+|||. |.+|+.+|..|...|.  +|+.+|++....  .+.        +.   ...++++++++||+|+++.
T Consensus       144 l~g~~VgIIG~-G~IG~~vA~~L~~~G~--~V~~~d~~~~~~--~~~--------~~---~~~~l~ell~~aDiVil~l  206 (330)
T PRK12480        144 VKNMTVAIIGT-GRIGAATAKIYAGFGA--TITAYDAYPNKD--LDF--------LT---YKDSVKEAIKDADIISLHV  206 (330)
T ss_pred             cCCCEEEEECC-CHHHHHHHHHHHhCCC--EEEEEeCChhHh--hhh--------hh---ccCCHHHHHhcCCEEEEeC
Confidence            35579999999 9999999999987776  999999875210  100        11   1235788999999999974

>PRK07035 short chain dehydrogenase; Provisional

Probab=96.93  E-value=0.011  Score=54.11  Aligned_cols=115  Identities=12%  Similarity=0.106  Sum_probs=64.2

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCCCCeEEEE-eCCCc---HHhh-------h
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGF-LGQPQ---LENA-------L  108 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~~~~v~~~-~~~~d---~~~a-------l  108 (354)
                      .++|.|+||+|.+|.+++..|...|.  .|+++|++.  ......++.+..  .....+ .+-.+   .+++       +
T Consensus         8 ~k~vlItGas~gIG~~l~~~l~~~G~--~Vi~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~   83 (252)
T PRK07035          8 GKIALVTGASRGIGEAIAKLLAQQGA--HVIVSSRKLDGCQAVADAIVAAG--GKAEALACHIGEMEQIDALFAHIRERH   83 (252)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcC--CeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            35799999999999999999999887  899999875  222333343321  111111 11112   1222       2


Q ss_pred             CCCcEEEEcCCCCC--C--CCCCH---HHHHHHHHHHHHHHHHHHhhh---CCCeEEEEecC
Q 018512          109 TGMDLVIIPAGVPR--K--PGMTR---DDLFNINAGIVRTLCEGIAKC---CPNATVNLISN  160 (354)
Q Consensus       109 ~~aDvVIi~ag~~~--~--~g~~r---~d~~~~n~~~~~~i~~~i~~~---~p~a~viv~tN  160 (354)
                      ...|+||+.+|...  .  ...+.   ...+..|+.....+.+.+.++   ...+.+++++.
T Consensus        84 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS  145 (252)
T PRK07035         84 GRLDILVNNAAANPYFGHILDTDLGAFQKTVDVNIRGYFFMSVEAGKLMKEQGGGSIVNVAS  145 (252)
T ss_pred             CCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCcEEEEECc
Confidence            35899999987421  1  11222   223455655554444444332   22355666553

>PRK07634 pyrroline-5-carboxylate reductase; Reviewed

Probab=96.93  E-value=0.0085  Score=55.07  Aligned_cols=70  Identities=10%  Similarity=0.181  Sum_probs=45.7

Q ss_pred             CCCeEEEEcCCCchHHHHHHHHHhCCC--CcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcC
Q 018512           41 AGFKVAILGAAGGIGQPLAMLMKINPL--VSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA  118 (354)
Q Consensus        41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~--~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~a  118 (354)
                      +.+||+|||+ |.+|.+++..++..+.  ..+++.++.+.. ....++.+..   .+..   +.++++.++++|+||++.
T Consensus         3 ~~~kI~iIG~-G~mg~ala~~l~~~~~~~~~~i~~~~~~~~-~~~~~~~~~~---~~~~---~~~~~~~~~~~DiViiav   74 (245)
T PRK07634          3 KKHRILFIGA-GRMAEAIFSGLLKTSKEYIEEIIVSNRSNV-EKLDQLQARY---NVST---TTDWKQHVTSVDTIVLAM   74 (245)
T ss_pred             CCCeEEEECc-CHHHHHHHHHHHhCCCCCcCeEEEECCCCH-HHHHHHHHHc---CcEE---eCChHHHHhcCCEEEEec
Confidence            3579999998 9999999999887752  334777876421 1122232211   1222   235677889999999983

>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA

Probab=96.93  E-value=0.003  Score=57.52  Aligned_cols=97  Identities=13%  Similarity=0.166  Sum_probs=61.4

Q ss_pred             EEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEE-EeCCCcHHhhhCCCcEEEEcCCCCCC
Q 018512           45 VAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRG-FLGQPQLENALTGMDLVIIPAGVPRK  123 (354)
Q Consensus        45 I~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~-~~~~~d~~~al~~aDvVIi~ag~~~~  123 (354)
                      |+|+||+|++|+.++..|+..+.  +|..+=++........+.+... ..+.. +.....+.++++|+|.||++.+... 
T Consensus         1 I~V~GatG~~G~~v~~~L~~~~~--~V~~l~R~~~~~~~~~l~~~g~-~vv~~d~~~~~~l~~al~g~d~v~~~~~~~~-   76 (233)
T PF05368_consen    1 ILVTGATGNQGRSVVRALLSAGF--SVRALVRDPSSDRAQQLQALGA-EVVEADYDDPESLVAALKGVDAVFSVTPPSH-   76 (233)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTG--CEEEEESSSHHHHHHHHHHTTT-EEEES-TT-HHHHHHHHTTCSEEEEESSCSC-
T ss_pred             CEEECCccHHHHHHHHHHHhCCC--CcEEEEeccchhhhhhhhcccc-eEeecccCCHHHHHHHHcCCceEEeecCcch-
Confidence            78999999999999999999776  7777777653333344554432 11211 1111346788999999999865332 


Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhhhCCCeE
Q 018512          124 PGMTRDDLFNINAGIVRTLCEGIAKCCPNAT  154 (354)
Q Consensus       124 ~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~  154 (354)
                        ..       -.+...++++++++.+-+-+
T Consensus        77 --~~-------~~~~~~~li~Aa~~agVk~~   98 (233)
T PF05368_consen   77 --PS-------ELEQQKNLIDAAKAAGVKHF   98 (233)
T ss_dssp             --CC-------HHHHHHHHHHHHHHHT-SEE
T ss_pred             --hh-------hhhhhhhHHHhhhccccceE
Confidence              11       13455667777777765443

NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....

>PRK08269 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=96.92  E-value=0.0054  Score=59.01  Aligned_cols=111  Identities=15%  Similarity=0.146  Sum_probs=70.7

Q ss_pred             hHHHHHHHHHhCCCCcEEEEEecCCc--h--------hH--HHH----HhcCC---------CCCeEEEEeCCCcHHhhh
Q 018512           54 IGQPLAMLMKINPLVSVLHLYDVVNT--P--------GV--TAD----ISHMD---------TGAVVRGFLGQPQLENAL  108 (354)
Q Consensus        54 vG~~~a~~l~~~~~~~ei~L~D~~~~--~--------g~--~~d----l~~~~---------~~~~v~~~~~~~d~~~al  108 (354)
                      +|..+|..++..|+  +|+|+|.++.  .        +.  +.+    +....         ....++.. .+.+.++++
T Consensus         1 MG~giA~~~a~~G~--~V~l~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~-~~~~~~~a~   77 (314)
T PRK08269          1 MGQGIALAFAFAGH--DVTLIDFKPRDAAGWRALDAEARAEIERTLAALVALGRIDAAQADAVLARIAVV-ARDGAADAL   77 (314)
T ss_pred             CcHHHHHHHHhCCC--eEEEEeCCcccchhhHHHHHHHHHHHHHHHHHHHHcCCCChhhHHHHHhCeEee-cCcchHHHh
Confidence            46889999999998  9999999871  1        11  111    11100         01234432 122466889


Q ss_pred             CCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecCCCCCchHHHHHHHHHhCCCCCCCEEEe
Q 018512          109 TGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV  187 (354)
Q Consensus       109 ~~aDvVIi~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~-p~a~viv~tNPv~~~~~~~~~~~~~~~~~p~~kviG~  187 (354)
                      ++||+||.+.              .++..+.+.+...+.+.+ |++++  +||.......-+    ...... +.|++|+
T Consensus        78 ~~aD~ViEav--------------~E~~~~K~~~f~~l~~~~~~~~il--aSntS~~~~~~l----a~~~~~-p~r~~g~  136 (314)
T PRK08269         78 ADADLVFEAV--------------PEVLDAKREALRWLGRHVDADAII--ASTTSTFLVTDL----QRHVAH-PERFLNA  136 (314)
T ss_pred             ccCCEEEECC--------------cCCHHHHHHHHHHHHhhCCCCcEE--EEccccCCHHHH----HhhcCC-cccEEEE
Confidence            9999999984              556778888888899988 56644  888877665332    232333 4678777


Q ss_pred             c
Q 018512          188 T  188 (354)
Q Consensus       188 t  188 (354)
                      -
T Consensus       137 H  137 (314)
T PRK08269        137 H  137 (314)
T ss_pred             e
Confidence            4

>PRK09242 tropinone reductase; Provisional

Probab=96.91  E-value=0.034  Score=51.03  Aligned_cols=116  Identities=17%  Similarity=0.172  Sum_probs=65.2

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCCCCeEEEEe-CCCc---H-------Hhhh
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQ---L-------ENAL  108 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~~~~v~~~~-~~~d---~-------~~al  108 (354)
                      .+++.|+||+|.+|..++..|+..|.  +|++.+++.  .+....++........+..+. +-.+   .       .+.+
T Consensus         9 ~k~~lItGa~~gIG~~~a~~l~~~G~--~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   86 (257)
T PRK09242          9 GQTALITGASKGIGLAIAREFLGLGA--DVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDWVEDHW   86 (257)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            35899999999999999999999887  899999875  222333443321111222211 1111   1       2234


Q ss_pred             CCCcEEEEcCCCCCC-C--CCCHH---HHHHHHHHHHHHHH----HHHhhhCCCeEEEEecC
Q 018512          109 TGMDLVIIPAGVPRK-P--GMTRD---DLFNINAGIVRTLC----EGIAKCCPNATVNLISN  160 (354)
Q Consensus       109 ~~aDvVIi~ag~~~~-~--g~~r~---d~~~~n~~~~~~i~----~~i~~~~p~a~viv~tN  160 (354)
                      ...|+||+++|.... +  ..+..   ..+..|+.....+.    +.+++. +.+.++++|.
T Consensus        87 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~ii~~sS  147 (257)
T PRK09242         87 DGLHILVNNAGGNIRKAAIDYTEDEWRGIFETNLFSAFELSRYAHPLLKQH-ASSAIVNIGS  147 (257)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhc-CCceEEEECc
Confidence            568999999986321 1  11222   23445555444444    444433 3355565553

>PRK07453 protochlorophyllide oxidoreductase; Validated

Probab=96.91  E-value=0.01  Score=56.80  Aligned_cols=114  Identities=13%  Similarity=0.060  Sum_probs=64.2

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc--hhHHHHHhcCCCCCeEEEE-eCCCc---HHhhhC------
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGF-LGQPQ---LENALT------  109 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~--~g~~~dl~~~~~~~~v~~~-~~~~d---~~~al~------  109 (354)
                      .++|.|+||+|.+|..++..|+..|.  +|++.+++..  .....++....  ..+..+ .+-.+   .+++++      
T Consensus         6 ~k~vlVTGas~gIG~~~a~~L~~~G~--~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dl~~~~~v~~~~~~~~~~~   81 (322)
T PRK07453          6 KGTVIITGASSGVGLYAAKALAKRGW--HVIMACRNLKKAEAAAQELGIPP--DSYTIIHIDLGDLDSVRRFVDDFRALG   81 (322)
T ss_pred             CCEEEEEcCCChHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHhhccC--CceEEEEecCCCHHHHHHHHHHHHHhC
Confidence            45799999999999999999999886  8999998752  22223332211  122221 11122   222232      


Q ss_pred             -CCcEEEEcCCCCCC----CCCCH---HHHHHHHHHHH----HHHHHHHhhhCC-CeEEEEec
Q 018512          110 -GMDLVIIPAGVPRK----PGMTR---DDLFNINAGIV----RTLCEGIAKCCP-NATVNLIS  159 (354)
Q Consensus       110 -~aDvVIi~ag~~~~----~g~~r---~d~~~~n~~~~----~~i~~~i~~~~p-~a~viv~t  159 (354)
                       ..|+||+.||....    ...+.   ...+..|+...    +.+.+.+++... .+.|+++|
T Consensus        82 ~~iD~li~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~riV~vs  144 (322)
T PRK07453         82 KPLDALVCNAAVYMPLLKEPLRSPQGYELSMATNHLGHFLLCNLLLEDLKKSPAPDPRLVILG  144 (322)
T ss_pred             CCccEEEECCcccCCCCCCCCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHhCCCCCceEEEEc
Confidence             48999999985321    12222   23355666544    444555544432 24555554

>PRK08264 short chain dehydrogenase; Validated

Probab=96.90  E-value=0.012  Score=53.29  Aligned_cols=144  Identities=11%  Similarity=0.066  Sum_probs=77.4

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCe-EEE-EeCCCcHHhhh---CCCcEEEE
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAV-VRG-FLGQPQLENAL---TGMDLVII  116 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~-v~~-~~~~~d~~~al---~~aDvVIi  116 (354)
                      .++|.|+||+|.+|+.++..|+..|. .+|++++++.....  +   ...... +.. .....++++.+   ...|+||+
T Consensus         6 ~~~vlItGgsg~iG~~la~~l~~~G~-~~V~~~~r~~~~~~--~---~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~   79 (238)
T PRK08264          6 GKVVLVTGANRGIGRAFVEQLLARGA-AKVYAAARDPESVT--D---LGPRVVPLQLDVTDPASVAAAAEAASDVTILVN   79 (238)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCc-ccEEEEecChhhhh--h---cCCceEEEEecCCCHHHHHHHHHhcCCCCEEEE
Confidence            45899999999999999999998875 26888998652211  1   110111 111 11112223333   35899999


Q ss_pred             cCCCCCCCC----CCH---HHHHHHHHHHHHHHHHHHhhh---CCCeEEEEecCCCCCchHHHHHHHHHhCCCCCCCEEE
Q 018512          117 PAGVPRKPG----MTR---DDLFNINAGIVRTLCEGIAKC---CPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLG  186 (354)
Q Consensus       117 ~ag~~~~~g----~~r---~d~~~~n~~~~~~i~~~i~~~---~p~a~viv~tNPv~~~~~~~~~~~~~~~~~p~~kviG  186 (354)
                      ++|.....+    .+.   .+.+..|+.....+.+.+.+.   ...+.++++|......            +.+....+|
T Consensus        80 ~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~------------~~~~~~~y~  147 (238)
T PRK08264         80 NAGIFRTGSLLLEGDEDALRAEMETNYFGPLAMARAFAPVLAANGGGAIVNVLSVLSWV------------NFPNLGTYS  147 (238)
T ss_pred             CCCcCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhcc------------CCCCchHhH
Confidence            998732211    122   233455666666666654432   2345566666433211            233333445


Q ss_pred             eccchHHHHHHHHHHHh
Q 018512          187 VTMLDVVRANTFVAEVL  203 (354)
Q Consensus       187 ~t~ld~~r~~~~la~~l  203 (354)
                      .+......+...++..+
T Consensus       148 ~sK~a~~~~~~~l~~~~  164 (238)
T PRK08264        148 ASKAAAWSLTQALRAEL  164 (238)
T ss_pred             HHHHHHHHHHHHHHHHh
Confidence            44433444555566655

>PRK07060 short chain dehydrogenase; Provisional

Probab=96.90  E-value=0.01  Score=53.93  Aligned_cols=116  Identities=18%  Similarity=0.191  Sum_probs=65.9

Q ss_pred             CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEE-EeCCCcHHhhh---CCCcEEEE
Q 018512           41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRG-FLGQPQLENAL---TGMDLVII  116 (354)
Q Consensus        41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~-~~~~~d~~~al---~~aDvVIi  116 (354)
                      +.+++.|+||+|.+|..++..|+..|.  +|++++++....  .++........+.. +....++.+++   ...|+||+
T Consensus         8 ~~~~~lItGa~g~iG~~~a~~l~~~g~--~V~~~~r~~~~~--~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~d~vi~   83 (245)
T PRK07060          8 SGKSVLVTGASSGIGRACAVALAQRGA--RVVAAARNAAAL--DRLAGETGCEPLRLDVGDDAAIRAALAAAGAFDGLVN   83 (245)
T ss_pred             CCCEEEEeCCcchHHHHHHHHHHHCCC--EEEEEeCCHHHH--HHHHHHhCCeEEEecCCCHHHHHHHHHHhCCCCEEEE
Confidence            345899999999999999999999887  899999865211  11211100011111 11111223333   35899999


Q ss_pred             cCCCCCCC---CCCH---HHHHHHHHHHHHHHHHHHhhh----CCCeEEEEecC
Q 018512          117 PAGVPRKP---GMTR---DDLFNINAGIVRTLCEGIAKC----CPNATVNLISN  160 (354)
Q Consensus       117 ~ag~~~~~---g~~r---~d~~~~n~~~~~~i~~~i~~~----~p~a~viv~tN  160 (354)
                      .+|.....   ..+.   ...+..|+.....+.+.+.+.    +..+.|+++|.
T Consensus        84 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS  137 (245)
T PRK07060         84 CAGIASLESALDMTAEGFDRVMAVNARGAALVARHVARAMIAAGRGGSIVNVSS  137 (245)
T ss_pred             CCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCcEEEEEcc
Confidence            98864321   1222   233456766666666655543    22355666653

>PRK12367 short chain dehydrogenase; Provisional

Probab=96.90  E-value=0.018  Score=53.13  Aligned_cols=101  Identities=17%  Similarity=0.214  Sum_probs=60.2

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEE-EeCCCcHHhhhCCCcEEEEcCCC
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRG-FLGQPQLENALTGMDLVIIPAGV  120 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~-~~~~~d~~~al~~aDvVIi~ag~  120 (354)
                      .+++.|+||+|.+|.+++..|+..|.  +|+++|++....... ..+.. ...+.. .....+..+.+...|++|+.||.
T Consensus        14 ~k~~lITGas~gIG~ala~~l~~~G~--~Vi~~~r~~~~~~~~-~~~~~-~~~~~~D~~~~~~~~~~~~~iDilVnnAG~   89 (245)
T PRK12367         14 GKRIGITGASGALGKALTKAFRAKGA--KVIGLTHSKINNSES-NDESP-NEWIKWECGKEESLDKQLASLDVLILNHGI   89 (245)
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCC--EEEEEECCchhhhhh-hccCC-CeEEEeeCCCHHHHHHhcCCCCEEEECCcc
Confidence            35899999999999999999999987  899999875211111 11111 111111 11112344567789999999986


Q ss_pred             CCCCCCCH---HHHHHHHHHHHHHHHHHH
Q 018512          121 PRKPGMTR---DDLFNINAGIVRTLCEGI  146 (354)
Q Consensus       121 ~~~~g~~r---~d~~~~n~~~~~~i~~~i  146 (354)
                      ......+.   .+.+..|+.....+++.+
T Consensus        90 ~~~~~~~~~~~~~~~~vN~~g~~~l~~~~  118 (245)
T PRK12367         90 NPGGRQDPENINKALEINALSSWRLLELF  118 (245)
T ss_pred             CCcCCCCHHHHHHHHHHHhHHHHHHHHHH
Confidence            43222222   334556765544444443

>PRK12744 short chain dehydrogenase; Provisional

Probab=96.89  E-value=0.024  Score=52.17  Aligned_cols=155  Identities=15%  Similarity=0.155  Sum_probs=81.4

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--c----hhHHHHHhcCCCCCeEEEEe-CCCc---HHhh----
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--T----PGVTADISHMDTGAVVRGFL-GQPQ---LENA----  107 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~----~g~~~dl~~~~~~~~v~~~~-~~~d---~~~a----  107 (354)
                      .+++.|+||+|.+|..++..|+..|.  ++++++.+.  .    .....++....  ..+..+. +-++   .++.    
T Consensus         8 ~k~vlItGa~~gIG~~~a~~l~~~G~--~vv~i~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~D~~~~~~~~~~~~~~   83 (257)
T PRK12744          8 GKVVLIAGGAKNLGGLIARDLAAQGA--KAVAIHYNSAASKADAEETVAAVKAAG--AKAVAFQADLTTAAAVEKLFDDA   83 (257)
T ss_pred             CcEEEEECCCchHHHHHHHHHHHCCC--cEEEEecCCccchHHHHHHHHHHHHhC--CcEEEEecCcCCHHHHHHHHHHH
Confidence            45899999999999999999998887  666665432  1    11122232211  1122111 1112   2222    


Q ss_pred             ---hCCCcEEEEcCCCCCCC---CCCH---HHHHHHHHHHHHHHHHHHhhhC-CCeEEEEe-cCCCCCchHHHHHHHHHh
Q 018512          108 ---LTGMDLVIIPAGVPRKP---GMTR---DDLFNINAGIVRTLCEGIAKCC-PNATVNLI-SNPVNSTVPIAAEVFKKA  176 (354)
Q Consensus       108 ---l~~aDvVIi~ag~~~~~---g~~r---~d~~~~n~~~~~~i~~~i~~~~-p~a~viv~-tNPv~~~~~~~~~~~~~~  176 (354)
                         +...|++|++||.....   ..+.   ...+.-|+.....+++.+.+.. +.+.++++ |.-....           
T Consensus        84 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~iv~~~ss~~~~~-----------  152 (257)
T PRK12744         84 KAAFGRPDIAINTVGKVLKKPIVEISEAEYDEMFAVNSKSAFFFIKEAGRHLNDNGKIVTLVTSLLGAF-----------  152 (257)
T ss_pred             HHhhCCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCEEEEecchhccc-----------
Confidence               24689999999864211   1222   2344557665555555554432 33433333 3222111           


Q ss_pred             CCCCCCCEEEeccchHHHHHHHHHHHhCCCCCCCcceEE
Q 018512          177 GTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVV  215 (354)
Q Consensus       177 ~~~p~~kviG~t~ld~~r~~~~la~~l~v~~~~v~~~v~  215 (354)
                        .|..-.++.+......+.+.+++.++  +..|++..+
T Consensus       153 --~~~~~~Y~~sK~a~~~~~~~la~e~~--~~~i~v~~v  187 (257)
T PRK12744        153 --TPFYSAYAGSKAPVEHFTRAASKEFG--ARGISVTAV  187 (257)
T ss_pred             --CCCcccchhhHHHHHHHHHHHHHHhC--cCceEEEEE
Confidence              12233466665555677788888875  344544333

>PRK12743 oxidoreductase; Provisional

Probab=96.89  E-value=0.054  Score=49.79  Aligned_cols=114  Identities=14%  Similarity=0.147  Sum_probs=63.4

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC---chhHHHHHhcCCCCCeEEEE-eCCCc---HHhh-------h
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN---TPGVTADISHMDTGAVVRGF-LGQPQ---LENA-------L  108 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~---~~g~~~dl~~~~~~~~v~~~-~~~~d---~~~a-------l  108 (354)
                      .+|.|+||+|.+|+.++..|+..|.  +|++.+...   ......++....  ..+..+ .+-++   .+.+       +
T Consensus         3 k~vlItGas~giG~~~a~~l~~~G~--~V~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~~~~   78 (256)
T PRK12743          3 QVAIVTASDSGIGKACALLLAQQGF--DIGITWHSDEEGAKETAEEVRSHG--VRAEIRQLDLSDLPEGAQALDKLIQRL   78 (256)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCC--EEEEEeCCChHHHHHHHHHHHhcC--CceEEEEccCCCHHHHHHHHHHHHHHc
Confidence            4799999999999999999999987  787776533   122223333222  112211 11122   1121       2


Q ss_pred             CCCcEEEEcCCCCCCC---CCC---HHHHHHHHHHHHHHHHHHHhh----hCCCeEEEEecC
Q 018512          109 TGMDLVIIPAGVPRKP---GMT---RDDLFNINAGIVRTLCEGIAK----CCPNATVNLISN  160 (354)
Q Consensus       109 ~~aDvVIi~ag~~~~~---g~~---r~d~~~~n~~~~~~i~~~i~~----~~p~a~viv~tN  160 (354)
                      ...|+||+++|.....   ..+   ....+..|+.....+.+.+.+    ....+.|+++|.
T Consensus        79 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS  140 (256)
T PRK12743         79 GRIDVLVNNAGAMTKAPFLDMDFDEWRKIFTVDVDGAFLCSQIAARHMVKQGQGGRIINITS  140 (256)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEEee
Confidence            4579999998864321   112   123345565555555544433    333456666654

>PRK12747 short chain dehydrogenase; Provisional

Probab=96.88  E-value=0.03  Score=51.30  Aligned_cols=147  Identities=18%  Similarity=0.172  Sum_probs=76.9

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC---chhHHHHHhcCCCCCeEEEE-eCCCcH----------Hhh
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN---TPGVTADISHMDTGAVVRGF-LGQPQL----------ENA  107 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~---~~g~~~dl~~~~~~~~v~~~-~~~~d~----------~~a  107 (354)
                      .+++.|+||+|.+|.+++..|+..|.  .|++.+...   ......++.....  .+..+ .+-.+.          .+.
T Consensus         4 ~k~~lItGas~gIG~~ia~~l~~~G~--~v~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~~   79 (252)
T PRK12747          4 GKVALVTGASRGIGRAIAKRLANDGA--LVAIHYGNRKEEAEETVYEIQSNGG--SAFSIGANLESLHGVEALYSSLDNE   79 (252)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCC--eEEEEcCCCHHHHHHHHHHHHhcCC--ceEEEecccCCHHHHHHHHHHHHHH
Confidence            35899999999999999999999987  788875432   2222233332111  11110 000111          111


Q ss_pred             h------CCCcEEEEcCCCCCCC---CCCH---HHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecCCCCCchHHHHHHHH
Q 018512          108 L------TGMDLVIIPAGVPRKP---GMTR---DDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNSTVPIAAEVFK  174 (354)
Q Consensus       108 l------~~aDvVIi~ag~~~~~---g~~r---~d~~~~n~~~~~~i~~~i~~~~-p~a~viv~tNPv~~~~~~~~~~~~  174 (354)
                      +      ...|++|+.||.....   ..+.   ...+.-|+.....+.+.+.+.- ..+.||++|.-....         
T Consensus        80 ~~~~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~---------  150 (252)
T PRK12747         80 LQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAATRI---------  150 (252)
T ss_pred             hhhhcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhcCCeEEEECCccccc---------
Confidence            1      2689999999864211   1121   2344566555555554444332 345666665432211         


Q ss_pred             HhCCCCCCCEEEeccchHHHHHHHHHHHhC
Q 018512          175 KAGTYDPKKLLGVTMLDVVRANTFVAEVLG  204 (354)
Q Consensus       175 ~~~~~p~~kviG~t~ld~~r~~~~la~~l~  204 (354)
                         +.|..-.++.+......+.+.++..++
T Consensus       151 ---~~~~~~~Y~~sKaa~~~~~~~la~e~~  177 (252)
T PRK12747        151 ---SLPDFIAYSMTKGAINTMTFTLAKQLG  177 (252)
T ss_pred             ---CCCCchhHHHHHHHHHHHHHHHHHHHh
Confidence               222222344444444566677777664

>PRK09072 short chain dehydrogenase; Provisional

Probab=96.87  E-value=0.013  Score=54.14  Aligned_cols=114  Identities=22%  Similarity=0.255  Sum_probs=65.9

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc--hhHHHHHhcCCCCCeEEEEe-CCCcHH---hh------hC
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFL-GQPQLE---NA------LT  109 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~--~g~~~dl~~~~~~~~v~~~~-~~~d~~---~a------l~  109 (354)
                      .++|.|+||+|.+|..++..|+.+|.  +|++++++..  .....++.. .  ..+..+. +-.|.+   +.      +.
T Consensus         5 ~~~vlItG~s~~iG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~-~--~~~~~~~~D~~d~~~~~~~~~~~~~~~   79 (263)
T PRK09072          5 DKRVLLTGASGGIGQALAEALAAAGA--RLLLVGRNAEKLEALAARLPY-P--GRHRWVVADLTSEAGREAVLARAREMG   79 (263)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHhc-C--CceEEEEccCCCHHHHHHHHHHHHhcC
Confidence            45899999999999999999999887  8999998752  222222311 1  1222211 112221   11      35


Q ss_pred             CCcEEEEcCCCCCCC---CCCH---HHHHHHHHHHHHHHHHHHhhh---CCCeEEEEecC
Q 018512          110 GMDLVIIPAGVPRKP---GMTR---DDLFNINAGIVRTLCEGIAKC---CPNATVNLISN  160 (354)
Q Consensus       110 ~aDvVIi~ag~~~~~---g~~r---~d~~~~n~~~~~~i~~~i~~~---~p~a~viv~tN  160 (354)
                      ..|+||+++|.....   ..+.   .+.+..|+.....+.+.+.++   .+.+.+++++.
T Consensus        80 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS  139 (263)
T PRK09072         80 GINVLINNAGVNHFALLEDQDPEAIERLLALNLTAPMQLTRALLPLLRAQPSAMVVNVGS  139 (263)
T ss_pred             CCCEEEECCCCCCccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEecC
Confidence            689999999864321   1121   234456766655555555432   22355665554

>PRK06196 oxidoreductase; Provisional

Probab=96.86  E-value=0.016  Score=55.26  Aligned_cols=113  Identities=19%  Similarity=0.142  Sum_probs=64.8

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc--hhHHHHHhcCCCCCeEEE-EeCCCcHHhh-------hCCC
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRG-FLGQPQLENA-------LTGM  111 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~--~g~~~dl~~~~~~~~v~~-~~~~~d~~~a-------l~~a  111 (354)
                      .++|.|+||+|.+|..++..|+..|.  +|++.+++..  .....++....   .+.. +....+.+++       +.+.
T Consensus        26 ~k~vlITGasggIG~~~a~~L~~~G~--~Vv~~~R~~~~~~~~~~~l~~v~---~~~~Dl~d~~~v~~~~~~~~~~~~~i  100 (315)
T PRK06196         26 GKTAIVTGGYSGLGLETTRALAQAGA--HVIVPARRPDVAREALAGIDGVE---VVMLDLADLESVRAFAERFLDSGRRI  100 (315)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHhhhCe---EEEccCCCHHHHHHHHHHHHhcCCCC
Confidence            35899999999999999999999987  8999998752  11222222111   0111 1111111111       2578


Q ss_pred             cEEEEcCCCCCCCC----CCHHHHHHHHHHH----HHHHHHHHhhhCCCeEEEEecC
Q 018512          112 DLVIIPAGVPRKPG----MTRDDLFNINAGI----VRTLCEGIAKCCPNATVNLISN  160 (354)
Q Consensus       112 DvVIi~ag~~~~~g----~~r~d~~~~n~~~----~~~i~~~i~~~~p~a~viv~tN  160 (354)
                      |+||+.||....+.    ......+..|+..    ++.+.+.+++.. .+.|+++|.
T Consensus       101 D~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~-~~~iV~vSS  156 (315)
T PRK06196        101 DILINNAGVMACPETRVGDGWEAQFATNHLGHFALVNLLWPALAAGA-GARVVALSS  156 (315)
T ss_pred             CEEEECCCCCCCCCccCCccHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCeEEEECC
Confidence            99999998643211    1122334555444    556666665543 355666653

>PRK05867 short chain dehydrogenase; Provisional

Probab=96.86  E-value=0.019  Score=52.62  Aligned_cols=114  Identities=19%  Similarity=0.193  Sum_probs=64.7

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCCCCeEEEEe-CCCc---HHh-------hh
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQ---LEN-------AL  108 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~~~~v~~~~-~~~d---~~~-------al  108 (354)
                      .+++.|+||+|.+|..++..|+..|.  +|++.+++.  .+....++....  ..+..+. +-++   ..+       .+
T Consensus         9 ~k~vlVtGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~   84 (253)
T PRK05867          9 GKRALITGASTGIGKRVALAYVEAGA--QVAIAARHLDALEKLADEIGTSG--GKVVPVCCDVSQHQQVTSMLDQVTAEL   84 (253)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCC--EEEEEcCCHHHHHHHHHHHHhcC--CeEEEEEccCCCHHHHHHHHHHHHHHh
Confidence            35799999999999999999999887  899999875  222233333321  1222211 1112   222       23


Q ss_pred             CCCcEEEEcCCCCCCC---CCCH---HHHHHHHHHHHHHH----HHHHhhhCCCeEEEEec
Q 018512          109 TGMDLVIIPAGVPRKP---GMTR---DDLFNINAGIVRTL----CEGIAKCCPNATVNLIS  159 (354)
Q Consensus       109 ~~aDvVIi~ag~~~~~---g~~r---~d~~~~n~~~~~~i----~~~i~~~~p~a~viv~t  159 (354)
                      ...|++|+++|.....   ..+.   ...+..|+.....+    .+.+.+....+.|++++
T Consensus        85 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~s  145 (253)
T PRK05867         85 GGIDIAVCNAGIITVTPMLDMPLEEFQRLQNTNVTGVFLTAQAAAKAMVKQGQGGVIINTA  145 (253)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCcEEEEEC
Confidence            4789999999864321   1122   22344555444444    44444433345566554

>PRK08936 glucose-1-dehydrogenase; Provisional

Probab=96.86  E-value=0.028  Score=51.82  Aligned_cols=157  Identities=15%  Similarity=0.117  Sum_probs=83.0

Q ss_pred             CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc---hhHHHHHhcCCCCCeEEEE-eCCCcH---Hhh------
Q 018512           41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT---PGVTADISHMDTGAVVRGF-LGQPQL---ENA------  107 (354)
Q Consensus        41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~---~g~~~dl~~~~~~~~v~~~-~~~~d~---~~a------  107 (354)
                      +.+++.|+||+|.+|..++..|+..|.  .+++...+..   .....++....  ..+..+ .+-+|.   .+.      
T Consensus         6 ~~k~~lItGa~~gIG~~ia~~l~~~G~--~vvi~~~~~~~~~~~~~~~l~~~~--~~~~~~~~Dl~~~~~i~~~~~~~~~   81 (261)
T PRK08936          6 EGKVVVITGGSTGLGRAMAVRFGKEKA--KVVINYRSDEEEANDVAEEIKKAG--GEAIAVKGDVTVESDVVNLIQTAVK   81 (261)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC--EEEEEeCCCHHHHHHHHHHHHHcC--CeEEEEEecCCCHHHHHHHHHHHHH
Confidence            456899999999999999999999887  7777766431   22223333221  111111 111222   111      


Q ss_pred             -hCCCcEEEEcCCCCCCC---CCCHH---HHHHHHHH----HHHHHHHHHhhhCCCeEEEEecCCCCCchHHHHHHHHHh
Q 018512          108 -LTGMDLVIIPAGVPRKP---GMTRD---DLFNINAG----IVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKA  176 (354)
Q Consensus       108 -l~~aDvVIi~ag~~~~~---g~~r~---d~~~~n~~----~~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~~~~~~~  176 (354)
                       +...|++|+.+|.....   ..+..   ..+..|+.    ..+.+.+.+.+....+.++++|.-...            
T Consensus        82 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~g~iv~~sS~~~~------------  149 (261)
T PRK08936         82 EFGTLDVMINNAGIENAVPSHEMSLEDWNKVINTNLTGAFLGSREAIKYFVEHDIKGNIINMSSVHEQ------------  149 (261)
T ss_pred             HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcccccc------------
Confidence             23579999999864321   11222   23455643    334556666665555666666541111            


Q ss_pred             CCCCCCCEEEeccchHHHHHHHHHHHhCCCCCCCcceEE
Q 018512          177 GTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVV  215 (354)
Q Consensus       177 ~~~p~~kviG~t~ld~~r~~~~la~~l~v~~~~v~~~v~  215 (354)
                      .+.|..-.++.+......+...++..+.  +..|++.++
T Consensus       150 ~~~~~~~~Y~~sKaa~~~~~~~la~e~~--~~gi~v~~v  186 (261)
T PRK08936        150 IPWPLFVHYAASKGGVKLMTETLAMEYA--PKGIRVNNI  186 (261)
T ss_pred             CCCCCCcccHHHHHHHHHHHHHHHHHHh--hcCeEEEEE
Confidence            1233333455543333345556666553  344544444

>PRK12742 oxidoreductase; Provisional

Probab=96.86  E-value=0.026  Score=50.95  Aligned_cols=147  Identities=15%  Similarity=0.168  Sum_probs=76.4

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCc---HHhh---hCCCcEEE
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQ---LENA---LTGMDLVI  115 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d---~~~a---l~~aDvVI  115 (354)
                      .++|.|+||+|.+|+.++..|+..|.  ++++.+..... ...++.... ....... +.+|   +.+.   ....|++|
T Consensus         6 ~k~vlItGasggIG~~~a~~l~~~G~--~v~~~~~~~~~-~~~~l~~~~-~~~~~~~-D~~~~~~~~~~~~~~~~id~li   80 (237)
T PRK12742          6 GKKVLVLGGSRGIGAAIVRRFVTDGA--NVRFTYAGSKD-AAERLAQET-GATAVQT-DSADRDAVIDVVRKSGALDILV   80 (237)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCC--EEEEecCCCHH-HHHHHHHHh-CCeEEec-CCCCHHHHHHHHHHhCCCcEEE
Confidence            45899999999999999999999887  78777654311 111121100 0111111 1112   1222   34589999


Q ss_pred             EcCCCCCCCC---CC---HHHHHHHHHHHHHHHHHHHhhh-CCCeEEEEecCCCCCchHHHHHHHHHhCCCCCCCEEEec
Q 018512          116 IPAGVPRKPG---MT---RDDLFNINAGIVRTLCEGIAKC-CPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVT  188 (354)
Q Consensus       116 i~ag~~~~~g---~~---r~d~~~~n~~~~~~i~~~i~~~-~p~a~viv~tNPv~~~~~~~~~~~~~~~~~p~~kviG~t  188 (354)
                      +++|......   .+   ....+..|+.....++..+.+. .+.+.+++++.-....           ...+..-.++.+
T Consensus        81 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~-----------~~~~~~~~Y~~s  149 (237)
T PRK12742         81 VNAGIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPEGGRIIIIGSVNGDR-----------MPVAGMAAYAAS  149 (237)
T ss_pred             ECCCCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcCCeEEEEecccccc-----------CCCCCCcchHHh
Confidence            9998643211   12   1234455655544444333332 2345555554322110           012334456665


Q ss_pred             cchHHHHHHHHHHHhC
Q 018512          189 MLDVVRANTFVAEVLG  204 (354)
Q Consensus       189 ~ld~~r~~~~la~~l~  204 (354)
                      ......+.+.+++.++
T Consensus       150 Kaa~~~~~~~la~~~~  165 (237)
T PRK12742        150 KSALQGMARGLARDFG  165 (237)
T ss_pred             HHHHHHHHHHHHHHHh
Confidence            5444556677777764

>PRK15461 NADH-dependent gamma-hydroxybutyrate dehydrogenase; Provisional

Probab=96.85  E-value=0.0067  Score=57.79  Aligned_cols=64  Identities=20%  Similarity=0.316  Sum_probs=47.2

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcC
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA  118 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~a  118 (354)
                      +||+|||. |.+|..++..|+..++  +|+++|+++..  ..++.....    .   ...+..+++++||+||++.
T Consensus         2 ~~Ig~IGl-G~mG~~mA~~l~~~G~--~V~v~d~~~~~--~~~~~~~g~----~---~~~s~~~~~~~aDvVi~~v   65 (296)
T PRK15461          2 AAIAFIGL-GQMGSPMASNLLKQGH--QLQVFDVNPQA--VDALVDKGA----T---PAASPAQAAAGAEFVITML   65 (296)
T ss_pred             CeEEEEee-CHHHHHHHHHHHHCCC--eEEEEcCCHHH--HHHHHHcCC----c---ccCCHHHHHhcCCEEEEec
Confidence            48999999 9999999999998887  89999997622  122322211    1   1235567889999999984

>PRK08507 prephenate dehydrogenase; Validated

Probab=96.85  E-value=0.0071  Score=56.87  Aligned_cols=66  Identities=23%  Similarity=0.343  Sum_probs=44.3

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcC
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA  118 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~a  118 (354)
                      |||+|||. |.+|..++..|...++..+|+.+|+++..  ...+.....   ...   ..+..+ +.+||+||++.
T Consensus         1 m~I~iIG~-G~mG~sla~~l~~~g~~~~v~~~d~~~~~--~~~~~~~g~---~~~---~~~~~~-~~~aD~Vilav   66 (275)
T PRK08507          1 MKIGIIGL-GLMGGSLGLALKEKGLISKVYGYDHNELH--LKKALELGL---VDE---IVSFEE-LKKCDVIFLAI   66 (275)
T ss_pred             CEEEEEcc-CHHHHHHHHHHHhcCCCCEEEEEcCCHHH--HHHHHHCCC---Ccc---cCCHHH-HhcCCEEEEeC
Confidence            58999998 99999999999988865578999987521  111222211   111   123445 44699999984

>PRK06139 short chain dehydrogenase; Provisional

Probab=96.85  E-value=0.022  Score=55.16  Aligned_cols=116  Identities=17%  Similarity=0.107  Sum_probs=65.4

Q ss_pred             CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCCCCe-EEE-EeCCCcHHhhh-------C
Q 018512           41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAV-VRG-FLGQPQLENAL-------T  109 (354)
Q Consensus        41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~~~~-v~~-~~~~~d~~~al-------~  109 (354)
                      +.++|+|+||+|.+|..++..|+..|.  +|++.++++  ++....++........ +.. +....+.++++       .
T Consensus         6 ~~k~vlITGAs~GIG~aia~~la~~G~--~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~~g   83 (330)
T PRK06139          6 HGAVVVITGASSGIGQATAEAFARRGA--RLVLAARDEEALQAVAEECRALGAEVLVVPTDVTDADQVKALATQAASFGG   83 (330)
T ss_pred             CCCEEEEcCCCCHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHhcC
Confidence            345899999999999999999999997  899999876  2223333433221111 111 11111222222       4


Q ss_pred             CCcEEEEcCCCCCCC---CCC---HHHHHHHHHHHH----HHHHHHHhhhCCCeEEEEec
Q 018512          110 GMDLVIIPAGVPRKP---GMT---RDDLFNINAGIV----RTLCEGIAKCCPNATVNLIS  159 (354)
Q Consensus       110 ~aDvVIi~ag~~~~~---g~~---r~d~~~~n~~~~----~~i~~~i~~~~p~a~viv~t  159 (354)
                      ..|++|++||.....   ..+   ....+..|+...    +...+.+++.. .+.+|+++
T Consensus        84 ~iD~lVnnAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~~~~~~-~g~iV~is  142 (330)
T PRK06139         84 RIDVWVNNVGVGAVGRFEETPIEAHEQVIQTNLIGYMRDAHAALPIFKKQG-HGIFINMI  142 (330)
T ss_pred             CCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHcC-CCEEEEEc
Confidence            689999999864321   111   122345554433    44445555433 45566554

>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional

Probab=96.84  E-value=0.035  Score=50.55  Aligned_cols=115  Identities=15%  Similarity=0.198  Sum_probs=62.1

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEE-ecCCc--hhHHHHHhcCCCCCeEEEE-eCCCc---HHhhh------
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLY-DVVNT--PGVTADISHMDTGAVVRGF-LGQPQ---LENAL------  108 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~-D~~~~--~g~~~dl~~~~~~~~v~~~-~~~~d---~~~al------  108 (354)
                      .++++|+||+|.+|..++..|+..|.  ++++. +++..  .....++....  ..+..+ .+-+|   +..++      
T Consensus         4 ~~~vlItGa~g~iG~~~a~~l~~~g~--~v~~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~   79 (250)
T PRK08063          4 GKVALVTGSSRGIGKAIALRLAEEGY--DIAVNYARSRKAAEETAEEIEALG--RKALAVKANVGDVEKIKEMFAQIDEE   79 (250)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCC--EEEEEcCCCHHHHHHHHHHHHhcC--CeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            35899999999999999999999887  66654 44432  22223333222  112211 11112   22223      


Q ss_pred             -CCCcEEEEcCCCCCC-C--CCCHHH---HHHHHHHHHHHHHHHHhhhC---CCeEEEEecC
Q 018512          109 -TGMDLVIIPAGVPRK-P--GMTRDD---LFNINAGIVRTLCEGIAKCC---PNATVNLISN  160 (354)
Q Consensus       109 -~~aDvVIi~ag~~~~-~--g~~r~d---~~~~n~~~~~~i~~~i~~~~---p~a~viv~tN  160 (354)
                       ...|+||+.+|.... +  ..+..+   .+..|......+++.+.++.   +.+.|+++|.
T Consensus        80 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS  141 (250)
T PRK08063         80 FGRLDVFVNNAASGVLRPAMELEESHWDWTMNINAKALLFCAQEAAKLMEKVGGGKIISLSS  141 (250)
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcc
Confidence             368999999875321 1  112221   23456555555555554432   3345666554

>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family

Probab=96.84  E-value=0.006  Score=57.21  Aligned_cols=95  Identities=13%  Similarity=0.101  Sum_probs=58.0

Q ss_pred             eEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEE-EeCCCcHHhhh------CC-CcEEE
Q 018512           44 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRG-FLGQPQLENAL------TG-MDLVI  115 (354)
Q Consensus        44 kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~-~~~~~d~~~al------~~-aDvVI  115 (354)
                      ||+|+||+|++|+.++..|+..++  +|..+.+++....     .... ..+.. +.....+.+++      ++ +|.|+
T Consensus         1 ~ilVtGatG~iG~~vv~~L~~~g~--~V~~~~R~~~~~~-----~~~~-~~~~~d~~d~~~l~~a~~~~~~~~g~~d~v~   72 (285)
T TIGR03649         1 TILLTGGTGKTASRIARLLQAASV--PFLVASRSSSSSA-----GPNE-KHVKFDWLDEDTWDNPFSSDDGMEPEISAVY   72 (285)
T ss_pred             CEEEEcCCChHHHHHHHHHHhCCC--cEEEEeCCCcccc-----CCCC-ccccccCCCHHHHHHHHhcccCcCCceeEEE
Confidence            589999999999999999998887  8999988762110     0000 00111 11223455666      67 99999


Q ss_pred             EcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEE
Q 018512          116 IPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNL  157 (354)
Q Consensus       116 i~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv  157 (354)
                      ++++...  .  .       ....+++++.+++.+-+-+|.+
T Consensus        73 ~~~~~~~--~--~-------~~~~~~~i~aa~~~gv~~~V~~  103 (285)
T TIGR03649        73 LVAPPIP--D--L-------APPMIKFIDFARSKGVRRFVLL  103 (285)
T ss_pred             EeCCCCC--C--h-------hHHHHHHHHHHHHcCCCEEEEe
Confidence            8764321  1  1       1234566777776665544433

This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.

>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.84  E-value=0.04  Score=50.20  Aligned_cols=147  Identities=14%  Similarity=0.115  Sum_probs=74.7

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC---chhHHHHHhcCCCCCeEEEE-eCCCc---HHh-------h
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN---TPGVTADISHMDTGAVVRGF-LGQPQ---LEN-------A  107 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~---~~g~~~dl~~~~~~~~v~~~-~~~~d---~~~-------a  107 (354)
                      ..+|.|+||+|++|++++..|+..+.  ++++.....   ......++....  ..+..+ .+-++   ...       .
T Consensus         6 ~~~vlitGasg~iG~~l~~~l~~~g~--~v~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~   81 (252)
T PRK06077          6 DKVVVVTGSGRGIGRAIAVRLAKEGS--LVVVNAKKRAEEMNETLKMVKENG--GEGIGVLADVSTREGCETLAKATIDR   81 (252)
T ss_pred             CcEEEEeCCCChHHHHHHHHHHHCCC--EEEEEeCCChHHHHHHHHHHHHcC--CeeEEEEeccCCHHHHHHHHHHHHHH
Confidence            45899999999999999999998887  666654332   111122222211  111111 01111   112       2


Q ss_pred             hCCCcEEEEcCCCCCCC---CCCH---HHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecCCCCCchHHHHHHHHHhCCCC
Q 018512          108 LTGMDLVIIPAGVPRKP---GMTR---DDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNSTVPIAAEVFKKAGTYD  180 (354)
Q Consensus       108 l~~aDvVIi~ag~~~~~---g~~r---~d~~~~n~~~~~~i~~~i~~~~-p~a~viv~tNPv~~~~~~~~~~~~~~~~~p  180 (354)
                      +...|+||+++|.....   +.+.   .+.+..|+.....+++.+.++- +.+.++++|.-..            ..+.+
T Consensus        82 ~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~sS~~~------------~~~~~  149 (252)
T PRK06077         82 YGVADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREGGAIVNIASVAG------------IRPAY  149 (252)
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcCcEEEEEcchhc------------cCCCC
Confidence            34679999999864221   1122   2334555555445555444432 2355666553111            11233


Q ss_pred             CCCEEEeccchHHHHHHHHHHHhC
Q 018512          181 PKKLLGVTMLDVVRANTFVAEVLG  204 (354)
Q Consensus       181 ~~kviG~t~ld~~r~~~~la~~l~  204 (354)
                      +.-.++.+......+...+++.++
T Consensus       150 ~~~~Y~~sK~~~~~~~~~l~~~~~  173 (252)
T PRK06077        150 GLSIYGAMKAAVINLTKYLALELA  173 (252)
T ss_pred             CchHHHHHHHHHHHHHHHHHHHHh
Confidence            333344443334456666677664

>PRK08219 short chain dehydrogenase; Provisional

Probab=96.84  E-value=0.013  Score=52.51  Aligned_cols=75  Identities=21%  Similarity=0.233  Sum_probs=46.5

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCe-EEE-EeCCCcHHhhhC---CCcEEEE
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAV-VRG-FLGQPQLENALT---GMDLVII  116 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~-v~~-~~~~~d~~~al~---~aDvVIi  116 (354)
                      ++++.|+||+|++|+.++..|+.+ .  +|+++|++...  ..++.+...... +.. .....+++++++   +.|+||+
T Consensus         3 ~~~vlVtG~~g~iG~~l~~~l~~~-~--~V~~~~r~~~~--~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~   77 (227)
T PRK08219          3 RPTALITGASRGIGAAIARELAPT-H--TLLLGGRPAER--LDELAAELPGATPFPVDLTDPEAIAAAVEQLGRLDVLVH   77 (227)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHhh-C--CEEEEeCCHHH--HHHHHHHhccceEEecCCCCHHHHHHHHHhcCCCCEEEE
Confidence            358999999999999999999887 5  89999986421  111211100011 111 111123344454   6999999


Q ss_pred             cCCCC
Q 018512          117 PAGVP  121 (354)
Q Consensus       117 ~ag~~  121 (354)
                      ++|..
T Consensus        78 ~ag~~   82 (227)
T PRK08219         78 NAGVA   82 (227)
T ss_pred             CCCcC
Confidence            98864

>PRK07454 short chain dehydrogenase; Provisional

Probab=96.83  E-value=0.013  Score=53.28  Aligned_cols=114  Identities=16%  Similarity=0.173  Sum_probs=63.8

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc--hhHHHHHhcCCCCCeEEEEe-CCCcH---Hhhh-------
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFL-GQPQL---ENAL-------  108 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~--~g~~~dl~~~~~~~~v~~~~-~~~d~---~~al-------  108 (354)
                      ++++.|+||+|.+|..++..|+.+|.  .|+++++++.  .....++....  ..+..+. +-++.   ..++       
T Consensus         6 ~k~vlItG~sg~iG~~la~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~   81 (241)
T PRK07454          6 MPRALITGASSGIGKATALAFAKAGW--DLALVARSQDALEALAAELRSTG--VKAAAYSIDLSNPEAIAPGIAELLEQF   81 (241)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhCC--CcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            35799999999999999999999888  8999998752  22222232211  1121111 11222   2222       


Q ss_pred             CCCcEEEEcCCCCCCC---CCC---HHHHHHHHHHH----HHHHHHHHhhhCCCeEEEEecC
Q 018512          109 TGMDLVIIPAGVPRKP---GMT---RDDLFNINAGI----VRTLCEGIAKCCPNATVNLISN  160 (354)
Q Consensus       109 ~~aDvVIi~ag~~~~~---g~~---r~d~~~~n~~~----~~~i~~~i~~~~p~a~viv~tN  160 (354)
                      .+.|+||.++|.....   ..+   ....+..|+..    .+.+.+.+.+.. .+.++++|.
T Consensus        82 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~isS  142 (241)
T PRK07454         82 GCPDVLINNAGMAYTGPLLEMPLSDWQWVIQLNLTSVFQCCSAVLPGMRARG-GGLIINVSS  142 (241)
T ss_pred             CCCCEEEECCCccCCCchhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcC-CcEEEEEcc
Confidence            3589999999864321   112   12234455554    344444444432 345555553

>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]

Probab=96.83  E-value=0.0021  Score=58.83  Aligned_cols=70  Identities=26%  Similarity=0.377  Sum_probs=46.6

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHH-HhcCCCCCeEEEEeCCCc---HHhh-hCCCcEEEEc
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTAD-ISHMDTGAVVRGFLGQPQ---LENA-LTGMDLVIIP  117 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~d-l~~~~~~~~v~~~~~~~d---~~~a-l~~aDvVIi~  117 (354)
                      |+++|+|+ |.+|+++|..|...|+  +++++|.++..  +.. +.+.....-+.+  ..++   +++| +.++|.+|.+
T Consensus         1 m~iiIiG~-G~vG~~va~~L~~~g~--~Vv~Id~d~~~--~~~~~~~~~~~~~v~g--d~t~~~~L~~agi~~aD~vva~   73 (225)
T COG0569           1 MKIIIIGA-GRVGRSVARELSEEGH--NVVLIDRDEER--VEEFLADELDTHVVIG--DATDEDVLEEAGIDDADAVVAA   73 (225)
T ss_pred             CEEEEECC-cHHHHHHHHHHHhCCC--ceEEEEcCHHH--HHHHhhhhcceEEEEe--cCCCHHHHHhcCCCcCCEEEEe
Confidence            68999999 9999999999999999  99999998721  111 111111111222  1122   3444 6899999997


Q ss_pred             CC
Q 018512          118 AG  119 (354)
Q Consensus       118 ag  119 (354)
                      -+
T Consensus        74 t~   75 (225)
T COG0569          74 TG   75 (225)
T ss_pred             eC
Confidence            43

>PRK07679 pyrroline-5-carboxylate reductase; Reviewed

Probab=96.83  E-value=0.012  Score=55.57  Aligned_cols=69  Identities=14%  Similarity=0.170  Sum_probs=47.0

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCC--CCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcC
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINP--LVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA  118 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~--~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~a  118 (354)
                      .|||+|||+ |.+|.+++..|+..+  ...+|.++|++.. ....++....   .++..   .+..++.++||+||++.
T Consensus         3 ~mkI~~IG~-G~mG~aia~~l~~~g~~~~~~v~v~~r~~~-~~~~~l~~~~---g~~~~---~~~~e~~~~aDvVilav   73 (279)
T PRK07679          3 IQNISFLGA-GSIAEAIIGGLLHANVVKGEQITVSNRSNE-TRLQELHQKY---GVKGT---HNKKELLTDANILFLAM   73 (279)
T ss_pred             CCEEEEECc-cHHHHHHHHHHHHCCCCCcceEEEECCCCH-HHHHHHHHhc---CceEe---CCHHHHHhcCCEEEEEe
Confidence            479999998 999999999998876  2247899997541 1122332211   12221   34567789999999984

>PRK11199 tyrA bifunctional chorismate mutase/prephenate dehydrogenase; Provisional

Probab=96.83  E-value=0.0074  Score=59.51  Aligned_cols=53  Identities=19%  Similarity=0.354  Sum_probs=43.5

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcC
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA  118 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~a  118 (354)
                      .+||+||||.|.+|..++..|...|+  +|.++|++..                      .+.++++++||+||++.
T Consensus        98 ~~~I~IiGG~GlmG~slA~~l~~~G~--~V~~~d~~~~----------------------~~~~~~~~~aDlVilav  150 (374)
T PRK11199         98 LRPVVIVGGKGQLGRLFAKMLTLSGY--QVRILEQDDW----------------------DRAEDILADAGMVIVSV  150 (374)
T ss_pred             cceEEEEcCCChhhHHHHHHHHHCCC--eEEEeCCCcc----------------------hhHHHHHhcCCEEEEeC
Confidence            47999999559999999999999997  8999997420                      12356789999999984

>PRK06928 pyrroline-5-carboxylate reductase; Reviewed

Probab=96.81  E-value=0.011  Score=55.77  Aligned_cols=100  Identities=18%  Similarity=0.137  Sum_probs=61.4

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCC--CcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcCC
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPL--VSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG  119 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~--~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~ag  119 (354)
                      ++||+|||+ |.+|.+++..|...+.  ..+|+++|++... ....+...  ...+..   +.+..++++++|+||++..
T Consensus         1 m~~I~iIG~-G~mG~ala~~L~~~g~~~~~~V~~~~r~~~~-~~~~l~~~--~~~~~~---~~~~~e~~~~aDvVilavp   73 (277)
T PRK06928          1 MEKIGFIGY-GSMADMIATKLLETEVATPEEIILYSSSKNE-HFNQLYDK--YPTVEL---ADNEAEIFTKCDHSFICVP   73 (277)
T ss_pred             CCEEEEECc-cHHHHHHHHHHHHCCCCCcccEEEEeCCcHH-HHHHHHHH--cCCeEE---eCCHHHHHhhCCEEEEecC
Confidence            368999998 9999999999988772  2489999986521 11222211  111222   2345677899999999842


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecCCCCC
Q 018512          120 VPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNS  164 (354)
Q Consensus       120 ~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~-p~a~viv~tNPv~~  164 (354)
                       |               ..+.++++.+..+- ++..|+.+.+-++.
T Consensus        74 -p---------------~~~~~vl~~l~~~l~~~~~ivS~~aGi~~  103 (277)
T PRK06928         74 -P---------------LAVLPLLKDCAPVLTPDRHVVSIAAGVSL  103 (277)
T ss_pred             -H---------------HHHHHHHHHHHhhcCCCCEEEEECCCCCH
Confidence             1               23445555555443 45556655565443

>PLN02256 arogenate dehydrogenase

Probab=96.81  E-value=0.011  Score=56.75  Aligned_cols=68  Identities=18%  Similarity=0.192  Sum_probs=47.4

Q ss_pred             CCCCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhh-CCCcEEEE
Q 018512           38 GGAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENAL-TGMDLVII  116 (354)
Q Consensus        38 ~~~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al-~~aDvVIi  116 (354)
                      ++.+.+||+|||. |.+|..++..|...|.  +|+.+|.+.....+.+   ..    +..   ..+.++.+ .++|+||+
T Consensus        32 ~~~~~~kI~IIG~-G~mG~slA~~L~~~G~--~V~~~d~~~~~~~a~~---~g----v~~---~~~~~e~~~~~aDvVil   98 (304)
T PLN02256         32 EKSRKLKIGIVGF-GNFGQFLAKTFVKQGH--TVLATSRSDYSDIAAE---LG----VSF---FRDPDDFCEEHPDVVLL   98 (304)
T ss_pred             ccCCCCEEEEEee-CHHHHHHHHHHHhCCC--EEEEEECccHHHHHHH---cC----Cee---eCCHHHHhhCCCCEEEE
Confidence            4567789999998 9999999999988775  8999998752211121   11    111   13455555 47999999


Q ss_pred             cC
Q 018512          117 PA  118 (354)
Q Consensus       117 ~a  118 (354)
                      +.
T Consensus        99 av  100 (304)
T PLN02256         99 CT  100 (304)
T ss_pred             ec
Confidence            84

>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases

Probab=96.80  E-value=0.005  Score=51.66  Aligned_cols=75  Identities=20%  Similarity=0.309  Sum_probs=52.0

Q ss_pred             CCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc--hhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEc
Q 018512           40 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIP  117 (354)
Q Consensus        40 ~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~--~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~  117 (354)
                      .+..+++|+|| |.+|..++..|...|. .+|.+++++..  +..+..+    ....+.... ..++.+.+.++|+||.+
T Consensus        10 l~~~~vlviGa-Gg~ar~v~~~L~~~g~-~~i~i~nRt~~ra~~l~~~~----~~~~~~~~~-~~~~~~~~~~~DivI~a   82 (135)
T PF01488_consen   10 LKGKRVLVIGA-GGAARAVAAALAALGA-KEITIVNRTPERAEALAEEF----GGVNIEAIP-LEDLEEALQEADIVINA   82 (135)
T ss_dssp             GTTSEEEEESS-SHHHHHHHHHHHHTTS-SEEEEEESSHHHHHHHHHHH----TGCSEEEEE-GGGHCHHHHTESEEEE-
T ss_pred             cCCCEEEEECC-HHHHHHHHHHHHHcCC-CEEEEEECCHHHHHHHHHHc----Cccccceee-HHHHHHHHhhCCeEEEe
Confidence            34569999999 9999999999998876 37999999752  2233333    112233322 24667789999999998


Q ss_pred             CCCC
Q 018512          118 AGVP  121 (354)
Q Consensus       118 ag~~  121 (354)
                      .+.+
T Consensus        83 T~~~   86 (135)
T PF01488_consen   83 TPSG   86 (135)
T ss_dssp             SSTT
T ss_pred             cCCC
Confidence            6554

Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....

>PRK06947 glucose-1-dehydrogenase; Provisional

Probab=96.80  E-value=0.046  Score=49.74  Aligned_cols=32  Identities=28%  Similarity=0.303  Sum_probs=27.6

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEec
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDV   76 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~   76 (354)
                      ++|.|+||+|.+|+.++..|+..+.  ++++.+.
T Consensus         3 k~ilItGas~giG~~la~~l~~~g~--~v~~~~~   34 (248)
T PRK06947          3 KVVLITGASRGIGRATAVLAAARGW--SVGINYA   34 (248)
T ss_pred             cEEEEeCCCCcHHHHHHHHHHHCCC--EEEEEeC
Confidence            4799999999999999999999887  7777654

>PRK06057 short chain dehydrogenase; Provisional

Probab=96.78  E-value=0.0087  Score=55.02  Aligned_cols=35  Identities=23%  Similarity=0.259  Sum_probs=31.8

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   78 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~   78 (354)
                      .++|.|+||+|.+|.+++..|+..|.  +|+++|++.
T Consensus         7 ~~~vlItGasggIG~~~a~~l~~~G~--~v~~~~r~~   41 (255)
T PRK06057          7 GRVAVITGGGSGIGLATARRLAAEGA--TVVVGDIDP   41 (255)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHcCC--EEEEEeCCH
Confidence            45899999999999999999999887  899999875

>PRK05884 short chain dehydrogenase; Provisional

Probab=96.77  E-value=0.0074  Score=54.69  Aligned_cols=34  Identities=15%  Similarity=0.220  Sum_probs=31.1

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   78 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~   78 (354)
                      ||+.|+||+|.+|+.++..|+..|.  +|++++++.
T Consensus         1 m~vlItGas~giG~~ia~~l~~~g~--~v~~~~r~~   34 (223)
T PRK05884          1 VEVLVTGGDTDLGRTIAEGFRNDGH--KVTLVGARR   34 (223)
T ss_pred             CeEEEEeCCchHHHHHHHHHHHCCC--EEEEEeCCH
Confidence            5899999999999999999999887  899999875

>PRK09186 flagellin modification protein A; Provisional

Probab=96.76  E-value=0.028  Score=51.38  Aligned_cols=35  Identities=26%  Similarity=0.275  Sum_probs=31.5

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   78 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~   78 (354)
                      .++|.|+||+|.+|..++..|+..|.  +|++.+++.
T Consensus         4 ~k~vlItGas~giG~~~a~~l~~~g~--~v~~~~r~~   38 (256)
T PRK09186          4 GKTILITGAGGLIGSALVKAILEAGG--IVIAADIDK   38 (256)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCC--EEEEEecCh
Confidence            45899999999999999999999887  899998865

>PF03949 Malic_M: Malic enzyme, NAD binding domain; InterPro: IPR012302 Malic enzymes (malate oxidoreductases) catalyse the oxidative decarboxylation of malate to form pyruvate [], a reaction important in a number of metabolic pathways - e

Probab=96.75  E-value=0.0067  Score=56.34  Aligned_cols=107  Identities=20%  Similarity=0.256  Sum_probs=72.2

Q ss_pred             CCCeEEEEcCCCchHHHHHHHHHhC----CCC-----cEEEEEecCC--ch------hHHHHHhcCCCCCeEEEEeCCCc
Q 018512           41 AGFKVAILGAAGGIGQPLAMLMKIN----PLV-----SVLHLYDVVN--TP------GVTADISHMDTGAVVRGFLGQPQ  103 (354)
Q Consensus        41 ~~~kI~IiGa~G~vG~~~a~~l~~~----~~~-----~ei~L~D~~~--~~------g~~~dl~~~~~~~~v~~~~~~~d  103 (354)
                      +..||++.|| |..|..++.+|...    |+-     +.++|+|.+.  ..      .....+.+... + ...   ..+
T Consensus        24 ~d~riv~~GA-GsAg~gia~ll~~~~~~~G~~~~eA~~~i~lvD~~Gll~~~r~~l~~~~~~~a~~~~-~-~~~---~~~   97 (255)
T PF03949_consen   24 SDQRIVFFGA-GSAGIGIARLLVAAMVREGLSEEEARKRIWLVDSKGLLTDDREDLNPHKKPFARKTN-P-EKD---WGS   97 (255)
T ss_dssp             GG-EEEEEB--SHHHHHHHHHHHHHHHCTTS-HHHHHTTEEEEETTEEEBTTTSSHSHHHHHHHBSSS-T-TT-----SS
T ss_pred             HHcEEEEeCC-ChhHHHHHHHHHHHHHHhcCCHHHHhccEEEEeccceEeccCccCChhhhhhhccCc-c-ccc---ccC
Confidence            3458999999 99999999887654    763     6899999975  11      11222333221 1 110   147


Q ss_pred             HHhhhCCC--cEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCC--CchH
Q 018512          104 LENALTGM--DLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVN--STVP  167 (354)
Q Consensus       104 ~~~al~~a--DvVIi~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv~--~~~~  167 (354)
                      +.++++++  |++|=+.+.+..              +.+++++.|.+++++.+|+=.|||..  -.++
T Consensus        98 L~eav~~~kPtvLIG~S~~~g~--------------ft~evv~~Ma~~~erPIIF~LSNPt~~aE~~p  151 (255)
T PF03949_consen   98 LLEAVKGAKPTVLIGLSGQGGA--------------FTEEVVRAMAKHNERPIIFPLSNPTPKAECTP  151 (255)
T ss_dssp             HHHHHHCH--SEEEECSSSTTS--------------S-HHHHHHCHHHSSSEEEEE-SSSCGGSSS-H
T ss_pred             HHHHHHhcCCCEEEEecCCCCc--------------CCHHHHHHHhccCCCCEEEECCCCCCcccCCH
Confidence            89999999  999987664421              45688899999999999999999987  6654

g. carbon dioxide released from the reaction may be used in sugar production during the Calvin cycle of photosynthesis []. There are 3 forms of the enzyme []: an NAD-dependent form that decarboxylates oxaloacetate; an NAD-dependent form that does not decarboxylate oxalo-acetate; and an NADPH-dependent form []. Other proteins known to be similar to malic enzymes are the Escherichia coli scfA protein; an enzyme from Zea mays (Maize), formerly thought to be cinnamyl-alcohol dehydrogenase []; and the hypothetical Saccharomyces cerevisiae protein YKL029c. Studies on the duck liver malic enzyme reveals that it can be alkylated by bromopyruvate, resulting in the loss of oxidative decarboxylation and the subsequent enhancement of pyruvate reductase activity []. The alkylated form is able to bind NADPH but not L-malate, indicating impaired substrate-or divalent metal ion-binding in the active site []. Sequence analysis has highlighted a cysteine residue as the point of alkylation, suggesting that it may play an important role in the activity of the enzyme [], although it is absent in the sequences from some species. There are three well conserved regions in the enzyme sequences. Two of them seem to be involved in the binding NAD or NADP. The significance of the third one, located in the central part of the enzymes, is not yet known.; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0055114 oxidation-reduction process; PDB: 2DVM_B 1WW8_A 3NV9_A 1PJ2_A 1PJL_B 1GZ3_A 1PJ4_A 1PJ3_C 1EFL_A 1EFK_B ....

>PRK07074 short chain dehydrogenase; Provisional

Probab=96.75  E-value=0.019  Score=52.63  Aligned_cols=34  Identities=32%  Similarity=0.319  Sum_probs=30.6

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   78 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~   78 (354)
                      .++.|+||+|.+|..++..|+..|.  +|+++|++.
T Consensus         3 k~ilItGat~~iG~~la~~L~~~g~--~v~~~~r~~   36 (257)
T PRK07074          3 RTALVTGAAGGIGQALARRFLAAGD--RVLALDIDA   36 (257)
T ss_pred             CEEEEECCcchHHHHHHHHHHHCCC--EEEEEeCCH
Confidence            3799999999999999999998887  899999875

>PF02558 ApbA: Ketopantoate reductase PanE/ApbA; InterPro: IPR013332 ApbA, the ketopantoate reductase enzyme 1

Probab=96.75  E-value=0.01  Score=50.24  Aligned_cols=118  Identities=19%  Similarity=0.182  Sum_probs=70.4

Q ss_pred             EEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhc-----CCCCCeEEEEeCCCcHHhhhCCCcEEEEcCC
Q 018512           45 VAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISH-----MDTGAVVRGFLGQPQLENALTGMDLVIIPAG  119 (354)
Q Consensus        45 I~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~-----~~~~~~v~~~~~~~d~~~al~~aDvVIi~ag  119 (354)
                      |+|+|+ |.+|..+|..|.+.++  +|.++++.. ......-..     ......+.......+..+....+|+||++.-
T Consensus         1 I~I~G~-GaiG~~~a~~L~~~g~--~V~l~~r~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~viv~vK   76 (151)
T PF02558_consen    1 ILIIGA-GAIGSLYAARLAQAGH--DVTLVSRSP-RLEAIKEQGLTITGPDGDETVQPPIVISAPSADAGPYDLVIVAVK   76 (151)
T ss_dssp             EEEEST-SHHHHHHHHHHHHTTC--EEEEEESHH-HHHHHHHHCEEEEETTEEEEEEEEEEESSHGHHHSTESEEEE-SS
T ss_pred             CEEECc-CHHHHHHHHHHHHCCC--ceEEEEccc-cHHhhhheeEEEEecccceecccccccCcchhccCCCcEEEEEec
Confidence            789999 9999999999999888  899999865 111111111     1100112211111121246799999999842


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecCCCCCchHHHHHHHHHhCCCCCCCEEEe-cc
Q 018512          120 VPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TM  189 (354)
Q Consensus       120 ~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~-p~a~viv~tNPv~~~~~~~~~~~~~~~~~p~~kviG~-t~  189 (354)
                      ..                -..+.++.++.+. ++..|+.+-|=++..-     .+.+.  +|+.++++- +.
T Consensus        77 a~----------------~~~~~l~~l~~~~~~~t~iv~~qNG~g~~~-----~l~~~--~~~~~v~~g~~~  125 (151)
T PF02558_consen   77 AY----------------QLEQALQSLKPYLDPNTTIVSLQNGMGNEE-----VLAEY--FPRPRVLGGVTT  125 (151)
T ss_dssp             GG----------------GHHHHHHHHCTGEETTEEEEEESSSSSHHH-----HHHCH--STGSGEEEEEEE
T ss_pred             cc----------------chHHHHHHHhhccCCCcEEEEEeCCCCcHH-----HHHHH--cCCCcEEEEEEe
Confidence            11                1234566677665 6778888888776553     23333  456677654 54

1.1.169 from EC of Salmonella typhimurium is required for the synthesis of thiamine via the alternative pyrimidine biosynthetic pathway []. Precursors to the pyrimidine moiety of thiamine are synthesized de novo by the purine biosynthetic pathway or the alternative pyrimidine biosynthetic (APB) pathway. The ApbA protein catalyzes the NADPH-specific reduction of ketopantoic acid to pantoic acid. This activity had previously been associated with the pantothenate biosynthetic gene panE []. ApbA and PanE are allelic [].; GO: 0008677 2-dehydropantoate 2-reductase activity, 0055114 oxidation-reduction process; PDB: 3EGO_B 3HWR_B 2QYT_A 1YJQ_A 1KS9_A 2OFP_A 1YON_A 3G17_E 3GHY_B 3I83_B ....

>PRK07023 short chain dehydrogenase; Provisional

Probab=96.75  E-value=0.0043  Score=56.59  Aligned_cols=35  Identities=14%  Similarity=0.191  Sum_probs=31.5

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   78 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~   78 (354)
                      +|+|.|+||+|.+|..++..|+..|.  +|++++++.
T Consensus         1 ~~~vlItGasggiG~~ia~~l~~~G~--~v~~~~r~~   35 (243)
T PRK07023          1 AVRAIVTGHSRGLGAALAEQLLQPGI--AVLGVARSR   35 (243)
T ss_pred             CceEEEecCCcchHHHHHHHHHhCCC--EEEEEecCc
Confidence            47899999999999999999998887  899999865

>PRK09009 C factor cell-cell signaling protein; Provisional

Probab=96.75  E-value=0.073  Score=48.07  Aligned_cols=72  Identities=22%  Similarity=0.337  Sum_probs=45.8

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEE-eCCCc------HHhhhCCCcEEE
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGF-LGQPQ------LENALTGMDLVI  115 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~-~~~~d------~~~al~~aDvVI  115 (354)
                      |+|+|+||+|.+|+.++..|+..+....+++.+++....    ..+    ..+..+ .+-++      +.+.+...|+||
T Consensus         1 ~~vlItGas~gIG~~ia~~l~~~~~~~~v~~~~~~~~~~----~~~----~~~~~~~~Dls~~~~~~~~~~~~~~id~li   72 (235)
T PRK09009          1 MNILIVGGSGGIGKAMVKQLLERYPDATVHATYRHHKPD----FQH----DNVQWHALDVTDEAEIKQLSEQFTQLDWLI   72 (235)
T ss_pred             CEEEEECCCChHHHHHHHHHHHhCCCCEEEEEccCCccc----ccc----CceEEEEecCCCHHHHHHHHHhcCCCCEEE
Confidence            689999999999999999999876433677777654211    111    111111 11111      223457899999


Q ss_pred             EcCCCCC
Q 018512          116 IPAGVPR  122 (354)
Q Consensus       116 i~ag~~~  122 (354)
                      +++|...
T Consensus        73 ~~aG~~~   79 (235)
T PRK09009         73 NCVGMLH   79 (235)
T ss_pred             ECCcccc
Confidence            9998753

>PLN02780 ketoreductase/ oxidoreductase

Probab=96.75  E-value=0.021  Score=54.95  Aligned_cols=116  Identities=16%  Similarity=0.203  Sum_probs=65.2

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCCCCeEEEE--eCCCc-------HHhhhC-
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGF--LGQPQ-------LENALT-  109 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~~~~v~~~--~~~~d-------~~~al~-  109 (354)
                      ...+.|+||+|.+|.+++..|+..|.  +|+++++++  .+....++........+..+  .-+.+       +.+.+. 
T Consensus        53 g~~~lITGAs~GIG~alA~~La~~G~--~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~l~~~~~~  130 (320)
T PLN02780         53 GSWALVTGPTDGIGKGFAFQLARKGL--NLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSGDIDEGVKRIKETIEG  130 (320)
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCC--CEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCCCcHHHHHHHHHHhcC
Confidence            45899999999999999999999987  899999986  23333444332111122111  11111       122333 


Q ss_pred             -CCcEEEEcCCCCCCC-----CCCH---HHHHHHHHHHHHHHH----HHHhhhCCCeEEEEecC
Q 018512          110 -GMDLVIIPAGVPRKP-----GMTR---DDLFNINAGIVRTLC----EGIAKCCPNATVNLISN  160 (354)
Q Consensus       110 -~aDvVIi~ag~~~~~-----g~~r---~d~~~~n~~~~~~i~----~~i~~~~p~a~viv~tN  160 (354)
                       +.|++|+.||.....     ..+.   ...+..|+.....+.    +.+.+.. .+.|+++|.
T Consensus       131 ~didilVnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~-~g~IV~iSS  193 (320)
T PLN02780        131 LDVGVLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTKVTQAVLPGMLKRK-KGAIINIGS  193 (320)
T ss_pred             CCccEEEEecCcCCCCCcccccCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcC-CcEEEEEec
Confidence             455999999864211     1222   234455655444444    4444333 455666553

>PRK08251 short chain dehydrogenase; Provisional

Probab=96.75  E-value=0.038  Score=50.32  Aligned_cols=114  Identities=22%  Similarity=0.204  Sum_probs=63.9

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCCCCeEEEEe-CCCcH----------HhhhC
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQL----------ENALT  109 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~~~~v~~~~-~~~d~----------~~al~  109 (354)
                      +++.|+||+|.+|..++..|+..|.  +|++.+++.  ......++........+..+. +-++.          .+.+.
T Consensus         3 k~vlItGas~giG~~la~~l~~~g~--~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   80 (248)
T PRK08251          3 QKILITGASSGLGAGMAREFAAKGR--DLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFRDELG   80 (248)
T ss_pred             CEEEEECCCCHHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            4799999999999999999998886  899999876  222223333211111222211 11222          12245


Q ss_pred             CCcEEEEcCCCCCCCC---CCH---HHHHHHHHHHHHHHHHHH----hhhCCCeEEEEec
Q 018512          110 GMDLVIIPAGVPRKPG---MTR---DDLFNINAGIVRTLCEGI----AKCCPNATVNLIS  159 (354)
Q Consensus       110 ~aDvVIi~ag~~~~~g---~~r---~d~~~~n~~~~~~i~~~i----~~~~p~a~viv~t  159 (354)
                      ..|+||+.+|......   .+.   ...+..|+.....+.+.+    ++... ..++++|
T Consensus        81 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~-~~iv~~s  139 (248)
T PRK08251         81 GLDRVIVNAGIGKGARLGTGKFWANKATAETNFVAALAQCEAAMEIFREQGS-GHLVLIS  139 (248)
T ss_pred             CCCEEEECCCcCCCCCcCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC-CeEEEEe
Confidence            7899999998643221   111   223455655544444444    33333 3445554

>PTZ00142 6-phosphogluconate dehydrogenase; Provisional

Probab=96.74  E-value=0.0062  Score=61.76  Aligned_cols=97  Identities=15%  Similarity=0.167  Sum_probs=60.7

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCC--CCeEEEEeCCCcHHhhhC---CCcEEEEc
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDT--GAVVRGFLGQPQLENALT---GMDLVIIP  117 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~--~~~v~~~~~~~d~~~al~---~aDvVIi~  117 (354)
                      .+|+|||. |.+|+++|..|+..|+  +|.++|+++..  +.++.....  ...+..   ..+++++++   ++|+||++
T Consensus         2 ~~IgvIGL-G~MG~~lA~nL~~~G~--~V~v~dr~~~~--~~~l~~~~~~~g~~i~~---~~s~~e~v~~l~~~d~Iil~   73 (470)
T PTZ00142          2 SDIGLIGL-AVMGQNLALNIASRGF--KISVYNRTYEK--TEEFVKKAKEGNTRVKG---YHTLEELVNSLKKPRKVILL   73 (470)
T ss_pred             CEEEEEeE-hHHHHHHHHHHHHCCC--eEEEEeCCHHH--HHHHHHhhhhcCCccee---cCCHHHHHhcCCCCCEEEEE
Confidence            58999999 9999999999999998  89999997622  112221100  111222   345666665   58988887


Q ss_pred             CCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhh-CCCeEEEEecCCC
Q 018512          118 AGVPRKPGMTRDDLFNINAGIVRTLCEGIAKC-CPNATVNLISNPV  162 (354)
Q Consensus       118 ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~-~p~a~viv~tNPv  162 (354)
                      ...+               ..+.++++.+..+ .|+.+||..+|-.
T Consensus        74 v~~~---------------~~v~~vi~~l~~~L~~g~iIID~gn~~  104 (470)
T PTZ00142         74 IKAG---------------EAVDETIDNLLPLLEKGDIIIDGGNEW  104 (470)
T ss_pred             eCCh---------------HHHHHHHHHHHhhCCCCCEEEECCCCC
Confidence            3211               2333444444433 3677788887644

>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

Probab=96.73  E-value=0.016  Score=53.53  Aligned_cols=35  Identities=20%  Similarity=0.267  Sum_probs=31.6

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   78 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~   78 (354)
                      .+++.|+||+|.+|..++..|+..|.  +|+++|+++
T Consensus         6 ~k~vlVtGas~gIG~~ia~~l~~~G~--~V~~~~r~~   40 (263)
T PRK06200          6 GQVALITGGGSGIGRALVERFLAEGA--RVAVLERSA   40 (263)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCC--EEEEEeCCH
Confidence            45899999999999999999999887  899999875

>PRK07904 short chain dehydrogenase; Provisional

Probab=96.73  E-value=0.025  Score=52.22  Aligned_cols=115  Identities=16%  Similarity=0.161  Sum_probs=65.2

Q ss_pred             CCCeEEEEcCCCchHHHHHHHHHhCC-CCcEEEEEecCCc---hhHHHHHhcCCCCCeEEEE----eCCCcH----Hhhh
Q 018512           41 AGFKVAILGAAGGIGQPLAMLMKINP-LVSVLHLYDVVNT---PGVTADISHMDTGAVVRGF----LGQPQL----ENAL  108 (354)
Q Consensus        41 ~~~kI~IiGa~G~vG~~~a~~l~~~~-~~~ei~L~D~~~~---~g~~~dl~~~~~~~~v~~~----~~~~d~----~~al  108 (354)
                      ++++|.|+||+|.+|.+++..|+..+ .  .|++.+++..   .....++.... ...+..+    ....+.    ++..
T Consensus         7 ~~~~vlItGas~giG~~la~~l~~~gg~--~V~~~~r~~~~~~~~~~~~l~~~~-~~~v~~~~~D~~~~~~~~~~~~~~~   83 (253)
T PRK07904          7 NPQTILLLGGTSEIGLAICERYLKNAPA--RVVLAALPDDPRRDAAVAQMKAAG-ASSVEVIDFDALDTDSHPKVIDAAF   83 (253)
T ss_pred             CCcEEEEEcCCcHHHHHHHHHHHhcCCC--eEEEEeCCcchhHHHHHHHHHhcC-CCceEEEEecCCChHHHHHHHHHHH
Confidence            34589999999999999999998875 5  8899998752   22233443321 1122221    111121    1212


Q ss_pred             --CCCcEEEEcCCCCCCCCC---CH---HHHHHHHHH----HHHHHHHHHhhhCCCeEEEEec
Q 018512          109 --TGMDLVIIPAGVPRKPGM---TR---DDLFNINAG----IVRTLCEGIAKCCPNATVNLIS  159 (354)
Q Consensus       109 --~~aDvVIi~ag~~~~~g~---~r---~d~~~~n~~----~~~~i~~~i~~~~p~a~viv~t  159 (354)
                        .+.|++|+.+|.......   +.   .+.+..|+.    ..+.+.+.+++... +.|+++|
T Consensus        84 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~~~~-~~iv~is  145 (253)
T PRK07904         84 AGGDVDVAIVAFGLLGDAEELWQNQRKAVQIAEINYTAAVSVGVLLGEKMRAQGF-GQIIAMS  145 (253)
T ss_pred             hcCCCCEEEEeeecCCchhhcccCHHHHHHHHHHHhHhHHHHHHHHHHHHHhcCC-ceEEEEe
Confidence              379999998876532211   11   123555654    33556777766544 4455554

>PRK06123 short chain dehydrogenase; Provisional

Probab=96.72  E-value=0.062  Score=48.84  Aligned_cols=146  Identities=16%  Similarity=0.116  Sum_probs=75.7

Q ss_pred             eEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC---chhHHHHHhcCCCCCe-EEE-EeCCCcHHhhh-------CCC
Q 018512           44 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN---TPGVTADISHMDTGAV-VRG-FLGQPQLENAL-------TGM  111 (354)
Q Consensus        44 kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~---~~g~~~dl~~~~~~~~-v~~-~~~~~d~~~al-------~~a  111 (354)
                      .+.|+||+|.+|+.++..|+..|.  .+++.+.+.   ......++........ +.. ......+++++       ...
T Consensus         4 ~~lVtG~~~~iG~~~a~~l~~~G~--~vv~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   81 (248)
T PRK06123          4 VMIITGASRGIGAATALLAAERGY--AVCLNYLRNRDAAEAVVQAIRRQGGEALAVAADVADEADVLRLFEAVDRELGRL   81 (248)
T ss_pred             EEEEECCCchHHHHHHHHHHHCCC--eEEEecCCCHHHHHHHHHHHHhCCCcEEEEEeccCCHHHHHHHHHHHHHHhCCC
Confidence            689999999999999999998886  777777543   1122222332211111 111 11111222333       367


Q ss_pred             cEEEEcCCCCCCC----CCCH---HHHHHHHHHHHHHHHHHHhhh----C--CCeEEEEecCCCCCchHHHHHHHHHhCC
Q 018512          112 DLVIIPAGVPRKP----GMTR---DDLFNINAGIVRTLCEGIAKC----C--PNATVNLISNPVNSTVPIAAEVFKKAGT  178 (354)
Q Consensus       112 DvVIi~ag~~~~~----g~~r---~d~~~~n~~~~~~i~~~i~~~----~--p~a~viv~tNPv~~~~~~~~~~~~~~~~  178 (354)
                      |+||+++|.....    ..+.   ...+..|+.....+.+.+.+.    .  .++.|+++|......            +
T Consensus        82 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~g~iv~~sS~~~~~------------~  149 (248)
T PRK06123         82 DALVNNAGILEAQMRLEQMDAARLTRIFATNVVGSFLCAREAVKRMSTRHGGRGGAIVNVSSMAARL------------G  149 (248)
T ss_pred             CEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCeEEEEECchhhcC------------C
Confidence            9999999864321    1122   234566666554444443322    1  245666666533221            1


Q ss_pred             CCCC-CEEEeccchHHHHHHHHHHHh
Q 018512          179 YDPK-KLLGVTMLDVVRANTFVAEVL  203 (354)
Q Consensus       179 ~p~~-kviG~t~ld~~r~~~~la~~l  203 (354)
                      .|.. -.++.+......+...+++.+
T Consensus       150 ~~~~~~~Y~~sKaa~~~~~~~la~~~  175 (248)
T PRK06123        150 SPGEYIDYAASKGAIDTMTIGLAKEV  175 (248)
T ss_pred             CCCCccchHHHHHHHHHHHHHHHHHh
Confidence            1211 124444433445666677776

>PRK12490 6-phosphogluconate dehydrogenase-like protein; Reviewed

Probab=96.72  E-value=0.011  Score=56.35  Aligned_cols=64  Identities=16%  Similarity=0.277  Sum_probs=44.5

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCC---CcEEEEcC
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTG---MDLVIIPA  118 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~---aDvVIi~a  118 (354)
                      |||+|||. |.+|+.++..|...+.  +|+++|+++..  ...+.+..    ...   ..+.++.+++   +|+||++.
T Consensus         1 m~Ig~IGl-G~mG~~mA~~L~~~g~--~v~v~dr~~~~--~~~~~~~g----~~~---~~s~~~~~~~~~~advVi~~v   67 (299)
T PRK12490          1 MKLGLIGL-GKMGGNMAERLREDGH--EVVGYDVNQEA--VDVAGKLG----ITA---RHSLEELVSKLEAPRTIWVMV   67 (299)
T ss_pred             CEEEEEcc-cHHHHHHHHHHHhCCC--EEEEEECCHHH--HHHHHHCC----Cee---cCCHHHHHHhCCCCCEEEEEe
Confidence            58999999 9999999999998887  89999987522  12232221    111   2345565555   68999974

>PRK09134 short chain dehydrogenase; Provisional

Probab=96.71  E-value=0.019  Score=52.84  Aligned_cols=114  Identities=14%  Similarity=0.132  Sum_probs=64.4

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC---chhHHHHHhcCCCCCeEEEEe-CCCc---HHhhh------
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN---TPGVTADISHMDTGAVVRGFL-GQPQ---LENAL------  108 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~---~~g~~~dl~~~~~~~~v~~~~-~~~d---~~~al------  108 (354)
                      .+++.|+||+|.+|.+++..|...|.  .+++.+...   ......++....  ..+..+. +-+|   +.+++      
T Consensus         9 ~k~vlItGas~giG~~la~~l~~~g~--~v~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dl~d~~~~~~~~~~~~~~   84 (258)
T PRK09134          9 PRAALVTGAARRIGRAIALDLAAHGF--DVAVHYNRSRDEAEALAAEIRALG--RRAVALQADLADEAEVRALVARASAA   84 (258)
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEeCCCHHHHHHHHHHHHhcC--CeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            45899999999999999999998887  777776643   112222232221  1222211 1122   22233      


Q ss_pred             -CCCcEEEEcCCCCCCC---CCC---HHHHHHHHHHHHHHHHHHHhhhC---CCeEEEEec
Q 018512          109 -TGMDLVIIPAGVPRKP---GMT---RDDLFNINAGIVRTLCEGIAKCC---PNATVNLIS  159 (354)
Q Consensus       109 -~~aDvVIi~ag~~~~~---g~~---r~d~~~~n~~~~~~i~~~i~~~~---p~a~viv~t  159 (354)
                       ...|+||+++|.....   ..+   ....+..|+.....+.+.+.++.   ..+.+++++
T Consensus        85 ~~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~~  145 (258)
T PRK09134         85 LGPITLLVNNASLFEYDSAASFTRASWDRHMATNLRAPFVLAQAFARALPADARGLVVNMI  145 (258)
T ss_pred             cCCCCEEEECCcCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEEC
Confidence             3479999999864321   122   23345667766666666555443   234555443

>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative

Probab=96.71  E-value=0.031  Score=50.57  Aligned_cols=114  Identities=14%  Similarity=0.166  Sum_probs=63.6

Q ss_pred             EEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC---chhHHHHHhcCCCCCeEEEEe-CCCc---HHhh-------hCC
Q 018512           45 VAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN---TPGVTADISHMDTGAVVRGFL-GQPQ---LENA-------LTG  110 (354)
Q Consensus        45 I~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~---~~g~~~dl~~~~~~~~v~~~~-~~~d---~~~a-------l~~  110 (354)
                      |.|+||+|.+|..++..|+..|.  ++++++...   ......++.+..  ..+..+. +-++   ..++       +..
T Consensus         1 vlItGas~giG~~~a~~l~~~G~--~v~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   76 (239)
T TIGR01831         1 VLVTGASRGIGRAIANRLAADGF--EICVHYHSGRSDAESVVSAIQAQG--GNARLLQFDVADRVACRTLLEADIAEHGA   76 (239)
T ss_pred             CEEeCCCchHHHHHHHHHHHCCC--EEEEEeCCCHHHHHHHHHHHHHcC--CeEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            57999999999999999999887  788887643   122223333322  1222211 1112   2222       234


Q ss_pred             CcEEEEcCCCCCCCC---CC---HHHHHHHHHHHHHHHHHHH----hhhCCCeEEEEecCCC
Q 018512          111 MDLVIIPAGVPRKPG---MT---RDDLFNINAGIVRTLCEGI----AKCCPNATVNLISNPV  162 (354)
Q Consensus       111 aDvVIi~ag~~~~~g---~~---r~d~~~~n~~~~~~i~~~i----~~~~p~a~viv~tNPv  162 (354)
                      .|.+|..+|......   .+   ....+..|+.....+.+.+    .+..+.+.++++|...
T Consensus        77 i~~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~  138 (239)
T TIGR01831        77 YYGVVLNAGITRDAAFPALSEEDWDIVIHTNLDGFYNVIHPCTMPMIRARQGGRIITLASVS  138 (239)
T ss_pred             CCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcCCeEEEEEcchh
Confidence            689999888643221   12   2334566766555554432    2223456666666543

This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.

>cd05312 NAD_bind_1_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 1

Probab=96.71  E-value=0.014  Score=54.84  Aligned_cols=121  Identities=21%  Similarity=0.238  Sum_probs=79.7

Q ss_pred             CCCeEEEEcCCCchHHHHHHHHHhC----CCC-----cEEEEEecCC--ch------hHHHHHhcCCCCCeEEEEeCCCc
Q 018512           41 AGFKVAILGAAGGIGQPLAMLMKIN----PLV-----SVLHLYDVVN--TP------GVTADISHMDTGAVVRGFLGQPQ  103 (354)
Q Consensus        41 ~~~kI~IiGa~G~vG~~~a~~l~~~----~~~-----~ei~L~D~~~--~~------g~~~dl~~~~~~~~v~~~~~~~d  103 (354)
                      +..||+|.|| |..|..++.+|...    |+.     ..++++|.+.  ..      .....+.+.. ..  .   ...+
T Consensus        24 ~d~~iv~~GA-GsAg~gia~ll~~~~~~~G~~~eeA~~~i~~vD~~Gll~~~r~~l~~~~~~~a~~~-~~--~---~~~~   96 (279)
T cd05312          24 SDQRILFLGA-GSAGIGIADLIVSAMVREGLSEEEARKKIWLVDSKGLLTKDRKDLTPFKKPFARKD-EE--K---EGKS   96 (279)
T ss_pred             hhcEEEEECc-CHHHHHHHHHHHHHHHHcCCChhhccCeEEEEcCCCeEeCCCCcchHHHHHHHhhc-Cc--c---cCCC
Confidence            3469999999 99999999877654    652     5899999975  11      1111222211 11  1   1357


Q ss_pred             HHhhhC--CCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCC--CchHHHHHHHHHhCCC
Q 018512          104 LENALT--GMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVN--STVPIAAEVFKKAGTY  179 (354)
Q Consensus       104 ~~~al~--~aDvVIi~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv~--~~~~~~~~~~~~~~~~  179 (354)
                      +.++++  ++|++|=+.+.+.              -+.+++.+.|.+++++.+|+-.|||..  -.++   +-.++.+  
T Consensus        97 L~e~i~~v~ptvlIG~S~~~g--------------~ft~evv~~Ma~~~~~PIIFaLSNPt~~~E~~p---e~a~~~t--  157 (279)
T cd05312          97 LLEVVKAVKPTVLIGLSGVGG--------------AFTEEVVRAMAKSNERPIIFALSNPTSKAECTA---EDAYKWT--  157 (279)
T ss_pred             HHHHHHhcCCCEEEEeCCCCC--------------CCCHHHHHHHHhcCCCCEEEECCCcCCccccCH---HHHHHhh--
Confidence            899999  9999988755432              144688889999999999999999986  4443   2223332  


Q ss_pred             CCCCEEEe
Q 018512          180 DPKKLLGV  187 (354)
Q Consensus       180 p~~kviG~  187 (354)
                      +.+.+++.
T Consensus       158 ~G~ai~AT  165 (279)
T cd05312         158 DGRALFAS  165 (279)
T ss_pred             cCCEEEEe
Confidence            12447777

Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists of eukaryotic and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH

>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional

Probab=96.69  E-value=0.01  Score=54.93  Aligned_cols=35  Identities=20%  Similarity=0.268  Sum_probs=31.5

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   78 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~   78 (354)
                      .+++.|+||+|.+|..++..|+..|.  +|++.|++.
T Consensus         9 ~k~vlItG~s~gIG~~la~~l~~~G~--~v~~~~~~~   43 (266)
T PRK06171          9 GKIIIVTGGSSGIGLAIVKELLANGA--NVVNADIHG   43 (266)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCC--EEEEEeCCc
Confidence            35899999999999999999999998  899999875

>PRK05693 short chain dehydrogenase; Provisional

Probab=96.67  E-value=0.024  Score=52.77  Aligned_cols=34  Identities=26%  Similarity=0.227  Sum_probs=30.6

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   78 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~   78 (354)
                      +++.|+||+|.+|..++..|+..|.  +|++.+++.
T Consensus         2 k~vlItGasggiG~~la~~l~~~G~--~V~~~~r~~   35 (274)
T PRK05693          2 PVVLITGCSSGIGRALADAFKAAGY--EVWATARKA   35 (274)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCC--EEEEEeCCH
Confidence            4799999999999999999998887  899999865

>PRK12491 pyrroline-5-carboxylate reductase; Reviewed

Probab=96.67  E-value=0.0088  Score=56.35  Aligned_cols=66  Identities=12%  Similarity=0.170  Sum_probs=46.6

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCC--CcEEEEEecCCchhHHHHHhc-CCCCCeEEEEeCCCcHHhhhCCCcEEEEcC
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPL--VSVLHLYDVVNTPGVTADISH-MDTGAVVRGFLGQPQLENALTGMDLVIIPA  118 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~--~~ei~L~D~~~~~g~~~dl~~-~~~~~~v~~~~~~~d~~~al~~aDvVIi~a  118 (354)
                      +||+|||+ |++|.+++..|+..++  ..+|+.+|+++..  ...+.+ ..    +...   .+..+.+++||+||++.
T Consensus         3 ~~IgfIG~-G~MG~aia~~L~~~g~~~~~~I~v~~r~~~~--~~~l~~~~g----~~~~---~~~~e~~~~aDiIiLav   71 (272)
T PRK12491          3 KQIGFIGC-GNMGIAMIGGMINKNIVSPDQIICSDLNVSN--LKNASDKYG----ITIT---TNNNEVANSADILILSI   71 (272)
T ss_pred             CeEEEECc-cHHHHHHHHHHHHCCCCCCceEEEECCCHHH--HHHHHHhcC----cEEe---CCcHHHHhhCCEEEEEe
Confidence            58999998 9999999999998874  3579999986521  222322 11    2221   24457789999999984

>PRK07677 short chain dehydrogenase; Provisional

Probab=96.67  E-value=0.026  Score=51.78  Aligned_cols=113  Identities=11%  Similarity=0.082  Sum_probs=65.1

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCCCCeEEEEe-CCCc---HHhh-------hC
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQ---LENA-------LT  109 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~~~~v~~~~-~~~d---~~~a-------l~  109 (354)
                      +++.|+||+|.+|..++..|+..|.  .|++.|++.  ......++....  ..+..+. +-++   .+++       +.
T Consensus         2 k~~lItG~s~giG~~ia~~l~~~G~--~Vi~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~~   77 (252)
T PRK07677          2 KVVIITGGSSGMGKAMAKRFAEEGA--NVVITGRTKEKLEEAKLEIEQFP--GQVLTVQMDVRNPEDVQKMVEQIDEKFG   77 (252)
T ss_pred             CEEEEeCCCChHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcC--CcEEEEEecCCCHHHHHHHHHHHHHHhC
Confidence            4799999999999999999999888  899999875  222223333221  1222211 1112   2221       24


Q ss_pred             CCcEEEEcCCCCCC---CCCCH---HHHHHHHHHHHHHHHHHH----hhhCCCeEEEEec
Q 018512          110 GMDLVIIPAGVPRK---PGMTR---DDLFNINAGIVRTLCEGI----AKCCPNATVNLIS  159 (354)
Q Consensus       110 ~aDvVIi~ag~~~~---~g~~r---~d~~~~n~~~~~~i~~~i----~~~~p~a~viv~t  159 (354)
                      ..|+||+++|....   ...+.   ...+..|+.....+.+.+    .+....+.++++|
T Consensus        78 ~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~is  137 (252)
T PRK07677         78 RIDALINNAAGNFICPAEDLSVNGWNSVIDIVLNGTFYCSQAVGKYWIEKGIKGNIINMV  137 (252)
T ss_pred             CccEEEECCCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCCEEEEEEc
Confidence            67999999875321   12222   234555655444444444    3333456777766

>PRK08324 short chain dehydrogenase; Validated

Probab=96.67  E-value=0.022  Score=60.53  Aligned_cols=114  Identities=21%  Similarity=0.269  Sum_probs=65.0

Q ss_pred             CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc--hhHHHHHhcCCCCCeEEEE-eCCCc---HHhhh------
Q 018512           41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGF-LGQPQ---LENAL------  108 (354)
Q Consensus        41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~--~g~~~dl~~~~~~~~v~~~-~~~~d---~~~al------  108 (354)
                      +.++|.|+||+|.+|+.++..|+..|.  +|+++|++..  .....++...   ..+..+ .+-++   ..+++      
T Consensus       421 ~gk~vLVTGasggIG~~la~~L~~~Ga--~Vvl~~r~~~~~~~~~~~l~~~---~~v~~v~~Dvtd~~~v~~~~~~~~~~  495 (681)
T PRK08324        421 AGKVALVTGAAGGIGKATAKRLAAEGA--CVVLADLDEEAAEAAAAELGGP---DRALGVACDVTDEAAVQAAFEEAALA  495 (681)
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCcC--EEEEEeCCHHHHHHHHHHHhcc---CcEEEEEecCCCHHHHHHHHHHHHHH
Confidence            346899999999999999999998887  8999999762  2222223221   111111 01112   22223      


Q ss_pred             -CCCcEEEEcCCCCCCC---CCCH---HHHHHHHHHHHHHH----HHHHhhhCCCeEEEEec
Q 018512          109 -TGMDLVIIPAGVPRKP---GMTR---DDLFNINAGIVRTL----CEGIAKCCPNATVNLIS  159 (354)
Q Consensus       109 -~~aDvVIi~ag~~~~~---g~~r---~d~~~~n~~~~~~i----~~~i~~~~p~a~viv~t  159 (354)
                       .+.|+||+++|.....   ..+.   ...+..|+.....+    .+.+++....+.|+++|
T Consensus       496 ~g~iDvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~~g~iV~vs  557 (681)
T PRK08324        496 FGGVDIVVSNAGIAISGPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQGLGGSIVFIA  557 (681)
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCcEEEEEC
Confidence             3789999999864321   1121   12334455444444    55555444335566555

>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

Probab=96.66  E-value=0.024  Score=51.68  Aligned_cols=35  Identities=29%  Similarity=0.286  Sum_probs=31.4

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   78 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~   78 (354)
                      .+++.|+||+|.+|+.++..|+..|.  +++++|.+.
T Consensus         8 ~k~vlItGas~~iG~~la~~l~~~G~--~v~~~~~~~   42 (252)
T PRK08220          8 GKTVWVTGAAQGIGYAVALAFVEAGA--KVIGFDQAF   42 (252)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCC--EEEEEecch
Confidence            45899999999999999999999887  899999865

>PRK08703 short chain dehydrogenase; Provisional

Probab=96.66  E-value=0.09  Score=47.65  Aligned_cols=35  Identities=17%  Similarity=0.223  Sum_probs=31.7

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   78 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~   78 (354)
                      .++|.|+||+|.+|.+++..|+..|.  .|++++++.
T Consensus         6 ~k~vlItG~sggiG~~la~~l~~~g~--~V~~~~r~~   40 (239)
T PRK08703          6 DKTILVTGASQGLGEQVAKAYAAAGA--TVILVARHQ   40 (239)
T ss_pred             CCEEEEECCCCcHHHHHHHHHHHcCC--EEEEEeCCh
Confidence            35899999999999999999998887  899999876

>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase

Probab=96.65  E-value=0.0077  Score=53.52  Aligned_cols=76  Identities=20%  Similarity=0.233  Sum_probs=49.4

Q ss_pred             CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc--hhHHHHHhcCCCCCeEEEE--eCCCcHHhhhCCCcEEEE
Q 018512           41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGF--LGQPQLENALTGMDLVII  116 (354)
Q Consensus        41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~--~g~~~dl~~~~~~~~v~~~--~~~~d~~~al~~aDvVIi  116 (354)
                      +.+++.|+||+|.+|..++..|...+.  +|.+++++..  .....++.+.. ...+...  ....++.++++++|+||.
T Consensus        27 ~~~~vlVlGgtG~iG~~~a~~l~~~g~--~V~l~~R~~~~~~~l~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~diVi~  103 (194)
T cd01078          27 KGKTAVVLGGTGPVGQRAAVLLAREGA--RVVLVGRDLERAQKAADSLRARF-GEGVGAVETSDDAARAAAIKGADVVFA  103 (194)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC--EEEEEcCCHHHHHHHHHHHHhhc-CCcEEEeeCCCHHHHHHHHhcCCEEEE
Confidence            456999999889999999999988775  8999998752  22222332211 1122221  111234578899999888


Q ss_pred             cCC
Q 018512          117 PAG  119 (354)
Q Consensus       117 ~ag  119 (354)
                      +..
T Consensus       104 at~  106 (194)
T cd01078         104 AGA  106 (194)
T ss_pred             CCC
Confidence            654

Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo

>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]

Probab=96.64  E-value=0.01  Score=55.89  Aligned_cols=145  Identities=23%  Similarity=0.237  Sum_probs=88.1

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhC--CCcEEEEcCCC
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALT--GMDLVIIPAGV  120 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~--~aDvVIi~ag~  120 (354)
                      |||.|+|++|++|+.+...|. .+.  +|+-.|..+     +|+.+..            .+.+.++  .-|+||++|.+
T Consensus         1 M~iLi~G~~GqLG~~L~~~l~-~~~--~v~a~~~~~-----~Ditd~~------------~v~~~i~~~~PDvVIn~AAy   60 (281)
T COG1091           1 MKILITGANGQLGTELRRALP-GEF--EVIATDRAE-----LDITDPD------------AVLEVIRETRPDVVINAAAY   60 (281)
T ss_pred             CcEEEEcCCChHHHHHHHHhC-CCc--eEEeccCcc-----ccccChH------------HHHHHHHhhCCCEEEECccc
Confidence            679999999999999998887 444  777777654     3333322            1234443  56999999987


Q ss_pred             CCCCC--CCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEe-cCCC--CCchHHHHHHHHHhCC-CCCCCEEEeccchHHH
Q 018512          121 PRKPG--MTRDDLFNINAGIVRTLCEGIAKCCPNATVNLI-SNPV--NSTVPIAAEVFKKAGT-YDPKKLLGVTMLDVVR  194 (354)
Q Consensus       121 ~~~~g--~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~-tNPv--~~~~~~~~~~~~~~~~-~p~~kviG~t~ld~~r  194 (354)
                      ..-..  ..+..-+.-|.....++++..++.+  +++|.+ |--|  +.-..     -++.+. -.|..++|-+.+....
T Consensus        61 t~vD~aE~~~e~A~~vNa~~~~~lA~aa~~~g--a~lVhiSTDyVFDG~~~~-----~Y~E~D~~~P~nvYG~sKl~GE~  133 (281)
T COG1091          61 TAVDKAESEPELAFAVNATGAENLARAAAEVG--ARLVHISTDYVFDGEKGG-----PYKETDTPNPLNVYGRSKLAGEE  133 (281)
T ss_pred             cccccccCCHHHHHHhHHHHHHHHHHHHHHhC--CeEEEeecceEecCCCCC-----CCCCCCCCCChhhhhHHHHHHHH
Confidence            64322  3355566889999999999999874  444444 3333  11100     011111 2245677776544332


Q ss_pred             HHHHHHHHhCCCCCCC---cceEEeecCC
Q 018512          195 ANTFVAEVLGLDPRDV---DVPVVGGHAG  220 (354)
Q Consensus       195 ~~~~la~~l~v~~~~v---~~~v~G~hg~  220 (354)
                      +    .+..+  +..+   ..|++|++|.
T Consensus       134 ~----v~~~~--~~~~I~Rtswv~g~~g~  156 (281)
T COG1091         134 A----VRAAG--PRHLILRTSWVYGEYGN  156 (281)
T ss_pred             H----HHHhC--CCEEEEEeeeeecCCCC
Confidence            2    22222  3333   5799999986

>PRK13243 glyoxylate reductase; Reviewed

Probab=96.63  E-value=0.012  Score=57.01  Aligned_cols=99  Identities=20%  Similarity=0.267  Sum_probs=62.6

Q ss_pred             CCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcCC
Q 018512           40 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG  119 (354)
Q Consensus        40 ~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~ag  119 (354)
                      -..++|.|||. |.+|+.+|..|..-|.  +|..+|+......  +... .    .. .   .++.+.+++||+|++...
T Consensus       148 L~gktvgIiG~-G~IG~~vA~~l~~~G~--~V~~~d~~~~~~~--~~~~-~----~~-~---~~l~ell~~aDiV~l~lP  213 (333)
T PRK13243        148 VYGKTIGIIGF-GRIGQAVARRAKGFGM--RILYYSRTRKPEA--EKEL-G----AE-Y---RPLEELLRESDFVSLHVP  213 (333)
T ss_pred             CCCCEEEEECc-CHHHHHHHHHHHHCCC--EEEEECCCCChhh--HHHc-C----CE-e---cCHHHHHhhCCEEEEeCC
Confidence            34579999999 9999999999987776  8999998652211  1111 1    11 1   256788999999999853


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec--CCCCCc
Q 018512          120 VPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS--NPVNST  165 (354)
Q Consensus       120 ~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~t--NPv~~~  165 (354)
                      ..  +         .+..++.+  +.+....|.+++|+++  ..+|.-
T Consensus       214 ~t--~---------~T~~~i~~--~~~~~mk~ga~lIN~aRg~~vd~~  248 (333)
T PRK13243        214 LT--K---------ETYHMINE--ERLKLMKPTAILVNTARGKVVDTK  248 (333)
T ss_pred             CC--h---------HHhhccCH--HHHhcCCCCeEEEECcCchhcCHH
Confidence            22  1         11111211  2333334789999986  445543

>PRK07831 short chain dehydrogenase; Provisional

Probab=96.63  E-value=0.13  Score=47.40  Aligned_cols=158  Identities=13%  Similarity=0.090  Sum_probs=80.2

Q ss_pred             CCeEEEEcCCC-chHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCCCCeEEEEe-CCCc---HHhh-------
Q 018512           42 GFKVAILGAAG-GIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQ---LENA-------  107 (354)
Q Consensus        42 ~~kI~IiGa~G-~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~~~~v~~~~-~~~d---~~~a-------  107 (354)
                      .+++.|+||+| .+|..++..|+..|.  .|++.|++.  ......++........+..+. +-.+   .+++       
T Consensus        17 ~k~vlItG~sg~gIG~~ia~~l~~~G~--~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   94 (262)
T PRK07831         17 GKVVLVTAAAGTGIGSATARRALEEGA--RVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALIDAAVER   94 (262)
T ss_pred             CCEEEEECCCcccHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHHHHHH
Confidence            45899999977 599999999999887  799999865  222223333211111222221 1112   2222       


Q ss_pred             hCCCcEEEEcCCCCCCC---CCC---HHHHHHHHHHHHH----HHHHHHhhhCCCeEEEEecCCCCCchHHHHHHHHHhC
Q 018512          108 LTGMDLVIIPAGVPRKP---GMT---RDDLFNINAGIVR----TLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAG  177 (354)
Q Consensus       108 l~~aDvVIi~ag~~~~~---g~~---r~d~~~~n~~~~~----~i~~~i~~~~p~a~viv~tNPv~~~~~~~~~~~~~~~  177 (354)
                      +...|+||+++|.....   ..+   ..+.+..|+....    .+.+.+.+....+.|++++......            
T Consensus        95 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~ss~~~~~------------  162 (262)
T PRK07831         95 LGRLDVLVNNAGLGGQTPVVDMTDDEWSRVLDVTLTGTFRATRAALRYMRARGHGGVIVNNASVLGWR------------  162 (262)
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcC------------
Confidence            23679999999864211   111   2223444554443    4444444333245555554322111            


Q ss_pred             CCCCCCEEEeccchHHHHHHHHHHHhCCCCCCCcceEE
Q 018512          178 TYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVV  215 (354)
Q Consensus       178 ~~p~~kviG~t~ld~~r~~~~la~~l~v~~~~v~~~v~  215 (354)
                      +.+..-.++.+...-..+.+.+|..+.  +..+++..+
T Consensus       163 ~~~~~~~Y~~sKaal~~~~~~la~e~~--~~gI~v~~i  198 (262)
T PRK07831        163 AQHGQAHYAAAKAGVMALTRCSALEAA--EYGVRINAV  198 (262)
T ss_pred             CCCCCcchHHHHHHHHHHHHHHHHHhC--ccCeEEEEE
Confidence            122233445443334456666666653  344544333

>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.62  E-value=0.035  Score=50.98  Aligned_cols=114  Identities=13%  Similarity=0.160  Sum_probs=63.8

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEE-EeCCCcHHhh-------hCCCcE
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRG-FLGQPQLENA-------LTGMDL  113 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~-~~~~~d~~~a-------l~~aDv  113 (354)
                      .+++.|+||+|.+|..++..|+..|.  +|++.+.+.. ....++.+... ..+.. .....+..++       +...|+
T Consensus         7 ~k~~lItGas~gIG~~~a~~l~~~G~--~v~~~~~~~~-~~~~~l~~~~~-~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   82 (255)
T PRK06463          7 GKVALITGGTRGIGRAIAEAFLREGA--KVAVLYNSAE-NEAKELREKGV-FTIKCDVGNRDQVKKSKEVVEKEFGRVDV   82 (255)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCC--EEEEEeCCcH-HHHHHHHhCCC-eEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            46899999999999999999999887  7888765431 11122322111 01111 1111122222       246799


Q ss_pred             EEEcCCCCCCC---CCCHH---HHHHHHHHH----HHHHHHHHhhhCCCeEEEEecC
Q 018512          114 VIIPAGVPRKP---GMTRD---DLFNINAGI----VRTLCEGIAKCCPNATVNLISN  160 (354)
Q Consensus       114 VIi~ag~~~~~---g~~r~---d~~~~n~~~----~~~i~~~i~~~~p~a~viv~tN  160 (354)
                      ||+++|.....   ..+..   ..+..|+..    .+.+.+.+++.. .+.||++|.
T Consensus        83 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~-~g~iv~isS  138 (255)
T PRK06463         83 LVNNAGIMYLMPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKLSK-NGAIVNIAS  138 (255)
T ss_pred             EEECCCcCCCCChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC-CcEEEEEcC
Confidence            99999874321   12222   234456554    566666665433 455666553

>PRK05872 short chain dehydrogenase; Provisional

Probab=96.62  E-value=0.024  Score=53.63  Aligned_cols=115  Identities=23%  Similarity=0.267  Sum_probs=66.1

Q ss_pred             CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc--hhHHHHHhcCCCCCeEEEE-eCCCcH---Hh-------h
Q 018512           41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGF-LGQPQL---EN-------A  107 (354)
Q Consensus        41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~--~g~~~dl~~~~~~~~v~~~-~~~~d~---~~-------a  107 (354)
                      +..++.|+||+|.+|..++..|+..|.  +|++.+++..  .....++..   ...+..+ .+-+|.   ++       .
T Consensus         8 ~gk~vlItGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~l~~~~~~l~~---~~~~~~~~~Dv~d~~~v~~~~~~~~~~   82 (296)
T PRK05872          8 AGKVVVVTGAARGIGAELARRLHARGA--KLALVDLEEAELAALAAELGG---DDRVLTVVADVTDLAAMQAAAEEAVER   82 (296)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHhcC---CCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence            345899999999999999999999987  8999998752  222233321   1111110 111221   11       2


Q ss_pred             hCCCcEEEEcCCCCCCC---CCCH---HHHHHHHHHHHHHHHHHHhhhC--CCeEEEEecC
Q 018512          108 LTGMDLVIIPAGVPRKP---GMTR---DDLFNINAGIVRTLCEGIAKCC--PNATVNLISN  160 (354)
Q Consensus       108 l~~aDvVIi~ag~~~~~---g~~r---~d~~~~n~~~~~~i~~~i~~~~--p~a~viv~tN  160 (354)
                      +...|+||+.+|.....   ..+.   ...+.-|+.....+++.+..+.  ..+.|+++|.
T Consensus        83 ~g~id~vI~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~g~iv~isS  143 (296)
T PRK05872         83 FGGIDVVVANAGIASGGSVAQVDPDAFRRVIDVNLLGVFHTVRATLPALIERRGYVLQVSS  143 (296)
T ss_pred             cCCCCEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEEeC
Confidence            35689999999864311   1122   2334556665555555543321  2455666653

>PRK06523 short chain dehydrogenase; Provisional

Probab=96.61  E-value=0.004  Score=57.32  Aligned_cols=36  Identities=17%  Similarity=0.145  Sum_probs=32.0

Q ss_pred             CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC
Q 018512           41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   78 (354)
Q Consensus        41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~   78 (354)
                      +.++|.|+||+|.+|+.++..|+..|.  +|++++++.
T Consensus         8 ~~k~vlItGas~gIG~~ia~~l~~~G~--~v~~~~r~~   43 (260)
T PRK06523          8 AGKRALVTGGTKGIGAATVARLLEAGA--RVVTTARSR   43 (260)
T ss_pred             CCCEEEEECCCCchhHHHHHHHHHCCC--EEEEEeCCh
Confidence            346899999999999999999999887  899999875

>PRK07062 short chain dehydrogenase; Provisional

Probab=96.61  E-value=0.073  Score=49.08  Aligned_cols=116  Identities=16%  Similarity=0.197  Sum_probs=65.5

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCCCCeEEEE-eCCCcH---H-------hhh
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGF-LGQPQL---E-------NAL  108 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~~~~v~~~-~~~~d~---~-------~al  108 (354)
                      .+.+.|+||+|.+|..++..|+..|.  +|++.+++.  ......++........+..+ .+-+|.   .       +.+
T Consensus         8 ~k~~lItGas~giG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   85 (265)
T PRK07062          8 GRVAVVTGGSSGIGLATVELLLEAGA--SVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAAVEARF   85 (265)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCC--eEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHHHHhc
Confidence            35799999999999999999999988  899999876  22223333322111122221 111222   1       123


Q ss_pred             CCCcEEEEcCCCCCCC---CCCHH---HHHHHH----HHHHHHHHHHHhhhCCCeEEEEecC
Q 018512          109 TGMDLVIIPAGVPRKP---GMTRD---DLFNIN----AGIVRTLCEGIAKCCPNATVNLISN  160 (354)
Q Consensus       109 ~~aDvVIi~ag~~~~~---g~~r~---d~~~~n----~~~~~~i~~~i~~~~p~a~viv~tN  160 (354)
                      ...|++|+.||.....   ..+..   ..+..|    +...+.+.+.+++.. .+.|+++|.
T Consensus        86 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~isS  146 (265)
T PRK07062         86 GGVDMLVNNAGQGRVSTFADTTDDAWRDELELKYFSVINPTRAFLPLLRASA-AASIVCVNS  146 (265)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccC-CcEEEEecc
Confidence            4679999999864321   11211   222333    344566666665443 355666553

>COG1893 ApbA Ketopantoate reductase [Coenzyme metabolism]

Probab=96.61  E-value=0.01  Score=56.85  Aligned_cols=120  Identities=23%  Similarity=0.247  Sum_probs=71.6

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc-hhHHH---HHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcC
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT-PGVTA---DISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA  118 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~-~g~~~---dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~a  118 (354)
                      |||+|+|+ |.+|+.++..|.+.+.  .|.++-+++. +..-.   .+.+.......... .+.+ .+....+|+||++.
T Consensus         1 mkI~IlGa-GAvG~l~g~~L~~~g~--~V~~~~R~~~~~~l~~~GL~i~~~~~~~~~~~~-~~~~-~~~~~~~Dlviv~v   75 (307)
T COG1893           1 MKILILGA-GAIGSLLGARLAKAGH--DVTLLVRSRRLEALKKKGLRIEDEGGNFTTPVV-AATD-AEALGPADLVIVTV   75 (307)
T ss_pred             CeEEEECC-cHHHHHHHHHHHhCCC--eEEEEecHHHHHHHHhCCeEEecCCCccccccc-cccC-hhhcCCCCEEEEEe
Confidence            79999999 9999999999999884  6666666542 11111   11111110111111 1122 46678999999985


Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecCCCCCchHHHHHHHHHhCCCCCCCE-EEeccc
Q 018512          119 GVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKL-LGVTML  190 (354)
Q Consensus       119 g~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~-p~a~viv~tNPv~~~~~~~~~~~~~~~~~p~~kv-iG~t~l  190 (354)
                      -..                ...+.++.+..+. ++.+|+..=|=.+..     +.+++.  +|.++| .|+|..
T Consensus        76 Ka~----------------q~~~al~~l~~~~~~~t~vl~lqNG~g~~-----e~l~~~--~~~~~il~G~~~~  126 (307)
T COG1893          76 KAY----------------QLEEALPSLAPLLGPNTVVLFLQNGLGHE-----EELRKI--LPKETVLGGVTTH  126 (307)
T ss_pred             ccc----------------cHHHHHHHhhhcCCCCcEEEEEeCCCcHH-----HHHHHh--CCcceEEEEEeee
Confidence            322                2345666666666 677888777877766     334443  455544 557654

>PRK09599 6-phosphogluconate dehydrogenase-like protein; Reviewed

Probab=96.61  E-value=0.014  Score=55.65  Aligned_cols=64  Identities=16%  Similarity=0.240  Sum_probs=44.1

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhC---CCcEEEEcC
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALT---GMDLVIIPA  118 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~---~aDvVIi~a  118 (354)
                      |||+|||. |.+|+.++..|+..++  +|+++|+++..  ..++.+..    +..   ..+..+..+   ++|+||++.
T Consensus         1 m~Ig~IGl-G~MG~~mA~~L~~~g~--~v~v~dr~~~~--~~~~~~~g----~~~---~~~~~e~~~~~~~~dvvi~~v   67 (301)
T PRK09599          1 MQLGMIGL-GRMGGNMARRLLRGGH--EVVGYDRNPEA--VEALAEEG----ATG---ADSLEELVAKLPAPRVVWLMV   67 (301)
T ss_pred             CEEEEEcc-cHHHHHHHHHHHHCCC--eEEEEECCHHH--HHHHHHCC----Cee---cCCHHHHHhhcCCCCEEEEEe
Confidence            68999999 9999999999999887  89999997622  12232222    111   123445454   479999874

>PRK06114 short chain dehydrogenase; Provisional

Probab=96.60  E-value=0.027  Score=51.76  Aligned_cols=116  Identities=19%  Similarity=0.297  Sum_probs=63.8

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc---hhHHHHHhcCCCCCe-EEE-EeCCCcHHhhh-------C
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT---PGVTADISHMDTGAV-VRG-FLGQPQLENAL-------T  109 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~---~g~~~dl~~~~~~~~-v~~-~~~~~d~~~al-------~  109 (354)
                      .+++.|+||+|.+|+.++..|+..|.  +|++.|++..   .....++.+...... +.. .....+..+++       .
T Consensus         8 ~k~~lVtG~s~gIG~~ia~~l~~~G~--~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g   85 (254)
T PRK06114          8 GQVAFVTGAGSGIGQRIAIGLAQAGA--DVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTSKADLRAAVARTEAELG   85 (254)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCC--EEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            34899999999999999999999887  8999998652   222233433221111 111 11111222222       3


Q ss_pred             CCcEEEEcCCCCCCCC---CCH---HHHHHHHHHHH----HHHHHHHhhhCCCeEEEEecC
Q 018512          110 GMDLVIIPAGVPRKPG---MTR---DDLFNINAGIV----RTLCEGIAKCCPNATVNLISN  160 (354)
Q Consensus       110 ~aDvVIi~ag~~~~~g---~~r---~d~~~~n~~~~----~~i~~~i~~~~p~a~viv~tN  160 (354)
                      .-|++|+++|......   .+.   ...+..|+...    +.+.+.+.+. ..+.++++|.
T Consensus        86 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~isS  145 (254)
T PRK06114         86 ALTLAVNAAGIANANPAEEMEEEQWQTVMDINLTGVFLSCQAEARAMLEN-GGGSIVNIAS  145 (254)
T ss_pred             CCCEEEECCCCCCCCChHhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhc-CCcEEEEECc
Confidence            4699999998643211   122   22344565544    4444444433 2345565543

>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP

Probab=96.59  E-value=0.0074  Score=50.45  Aligned_cols=35  Identities=29%  Similarity=0.396  Sum_probs=30.7

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   78 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~   78 (354)
                      ..||+|+|+ |.+|+.++..|+..|. .++.|+|.+.
T Consensus         2 ~~~v~iiG~-G~vGs~va~~L~~~Gv-~~i~lvD~d~   36 (135)
T PF00899_consen    2 NKRVLIIGA-GGVGSEVAKNLARSGV-GKITLVDDDI   36 (135)
T ss_dssp             T-EEEEEST-SHHHHHHHHHHHHHTT-SEEEEEESSB
T ss_pred             CCEEEEECc-CHHHHHHHHHHHHhCC-CceeecCCcc
Confidence            359999999 9999999999999887 4899999874

Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....

>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase

Probab=96.59  E-value=0.02  Score=54.98  Aligned_cols=117  Identities=18%  Similarity=0.244  Sum_probs=72.4

Q ss_pred             CCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCch--hHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEc
Q 018512           40 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP--GVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIP  117 (354)
Q Consensus        40 ~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~--g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~  117 (354)
                      .+.++|+|+|+ |.+|..++..|...+. .+|.++|++..+  ..+..+.     ..+..   ..++.+++.++|+||.+
T Consensus       176 l~~~~V~ViGa-G~iG~~~a~~L~~~g~-~~V~v~~r~~~ra~~la~~~g-----~~~~~---~~~~~~~l~~aDvVi~a  245 (311)
T cd05213         176 LKGKKVLVIGA-GEMGELAAKHLAAKGV-AEITIANRTYERAEELAKELG-----GNAVP---LDELLELLNEADVVISA  245 (311)
T ss_pred             ccCCEEEEECc-HHHHHHHHHHHHHcCC-CEEEEEeCCHHHHHHHHHHcC-----CeEEe---HHHHHHHHhcCCEEEEC
Confidence            45679999999 9999999998887553 389999987522  2222221     11111   13567888999999998


Q ss_pred             CCCCCCCCCCHHHHHHHHHHHHHHHHHHH-hhh-CCCeEEEEecCCCCCchHHHHHHHHHhCCCCCCCEEEeccc
Q 018512          118 AGVPRKPGMTRDDLFNINAGIVRTLCEGI-AKC-CPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTML  190 (354)
Q Consensus       118 ag~~~~~g~~r~d~~~~n~~~~~~i~~~i-~~~-~p~a~viv~tNPv~~~~~~~~~~~~~~~~~p~~kviG~t~l  190 (354)
                      .+.+..                .++.+.+ ... .+..+++-.++|-|+-..        ...+|.-+++.+-++
T Consensus       246 t~~~~~----------------~~~~~~~~~~~~~~~~~viDlavPrdi~~~--------v~~l~~v~l~~vDdl  296 (311)
T cd05213         246 TGAPHY----------------AKIVERAMKKRSGKPRLIVDLAVPRDIEPE--------VGELEGVRLYTIDDL  296 (311)
T ss_pred             CCCCch----------------HHHHHHHHhhCCCCCeEEEEeCCCCCCchh--------hccCCCcEEEEHHHh
Confidence            765531                1111221 111 245678888999987632        223555555655443

Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,

>PRK05599 hypothetical protein; Provisional

Probab=96.58  E-value=0.1  Score=47.83  Aligned_cols=146  Identities=13%  Similarity=0.168  Sum_probs=78.8

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCCCCeEEEEe-CCCc---H-------HhhhC
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQ---L-------ENALT  109 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~~~~v~~~~-~~~d---~-------~~al~  109 (354)
                      |.+.|+||++.+|..++..|. +|.  .|++.++++  ++....++..... ..+..+. +-.|   .       .+.+.
T Consensus         1 ~~vlItGas~GIG~aia~~l~-~g~--~Vil~~r~~~~~~~~~~~l~~~~~-~~~~~~~~Dv~d~~~v~~~~~~~~~~~g   76 (246)
T PRK05599          1 MSILILGGTSDIAGEIATLLC-HGE--DVVLAARRPEAAQGLASDLRQRGA-TSVHVLSFDAQDLDTHRELVKQTQELAG   76 (246)
T ss_pred             CeEEEEeCccHHHHHHHHHHh-CCC--EEEEEeCCHHHHHHHHHHHHhccC-CceEEEEcccCCHHHHHHHHHHHHHhcC
Confidence            468999999999999999988 464  899999876  3333344443221 1111110 1111   1       12235


Q ss_pred             CCcEEEEcCCCCCCCC---CCH---HHHHHHH----HHHHHHHHHHHhhhCCCeEEEEecCCCCCchHHHHHHHHHhCCC
Q 018512          110 GMDLVIIPAGVPRKPG---MTR---DDLFNIN----AGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTY  179 (354)
Q Consensus       110 ~aDvVIi~ag~~~~~g---~~r---~d~~~~n----~~~~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~~~~~~~~~~  179 (354)
                      ..|++|+.+|......   .+.   .+....|    +...+.+.+.+.+...++.|+++|.-....            +.
T Consensus        77 ~id~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~------------~~  144 (246)
T PRK05599         77 EISLAVVAFGILGDQERAETDEAHAVEIATVDYTAQVSMLTVLADELRAQTAPAAIVAFSSIAGWR------------AR  144 (246)
T ss_pred             CCCEEEEecCcCCCchhhhcCcHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCCEEEEEecccccc------------CC
Confidence            6899999988643211   111   1222223    233345556665544457777776543322            12


Q ss_pred             CCCCEEEeccchHHHHHHHHHHHhC
Q 018512          180 DPKKLLGVTMLDVVRANTFVAEVLG  204 (354)
Q Consensus       180 p~~kviG~t~ld~~r~~~~la~~l~  204 (354)
                      |..-.++.+.-....+.+.++..++
T Consensus       145 ~~~~~Y~asKaa~~~~~~~la~el~  169 (246)
T PRK05599        145 RANYVYGSTKAGLDAFCQGLADSLH  169 (246)
T ss_pred             cCCcchhhHHHHHHHHHHHHHHHhc
Confidence            2223455554444556677777664

>TIGR02685 pter_reduc_Leis pteridine reductase

Probab=96.58  E-value=0.099  Score=48.39  Aligned_cols=32  Identities=22%  Similarity=0.224  Sum_probs=28.0

Q ss_pred             eEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecC
Q 018512           44 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVV   77 (354)
Q Consensus        44 kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~   77 (354)
                      .+.|+||+|.+|..++..|+..|.  +|++.+.+
T Consensus         3 ~~lITGas~gIG~~~a~~l~~~G~--~V~~~~~~   34 (267)
T TIGR02685         3 AAVVTGAAKRIGSSIAVALHQEGY--RVVLHYHR   34 (267)
T ss_pred             EEEEeCCCCcHHHHHHHHHHhCCC--eEEEEcCC
Confidence            689999999999999999999887  78887543

Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.

>PRK08177 short chain dehydrogenase; Provisional

Probab=96.57  E-value=0.033  Score=50.20  Aligned_cols=34  Identities=18%  Similarity=0.073  Sum_probs=31.1

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   78 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~   78 (354)
                      +++.|+||+|.+|+.++..|+..|.  +|+++|++.
T Consensus         2 k~vlItG~sg~iG~~la~~l~~~G~--~V~~~~r~~   35 (225)
T PRK08177          2 RTALIIGASRGLGLGLVDRLLERGW--QVTATVRGP   35 (225)
T ss_pred             CEEEEeCCCchHHHHHHHHHHhCCC--EEEEEeCCC
Confidence            4799999999999999999999887  899999876

>PRK07775 short chain dehydrogenase; Provisional

Probab=96.56  E-value=0.042  Score=51.21  Aligned_cols=34  Identities=21%  Similarity=0.198  Sum_probs=30.4

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   78 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~   78 (354)
                      +.+.|+||+|.+|.+++..|+..|.  +|++.+++.
T Consensus        11 ~~vlVtGa~g~iG~~la~~L~~~G~--~V~~~~r~~   44 (274)
T PRK07775         11 RPALVAGASSGIGAATAIELAAAGF--PVALGARRV   44 (274)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCC--EEEEEeCCH
Confidence            4799999999999999999999887  888888764

>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.56  E-value=0.028  Score=53.56  Aligned_cols=79  Identities=25%  Similarity=0.351  Sum_probs=50.1

Q ss_pred             CCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC---chhHHHHHhcCCCCCeEEEEe-CCCc---HHhh-----
Q 018512           40 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN---TPGVTADISHMDTGAVVRGFL-GQPQ---LENA-----  107 (354)
Q Consensus        40 ~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~---~~g~~~dl~~~~~~~~v~~~~-~~~d---~~~a-----  107 (354)
                      -+.+++.|+||+|.+|..++..|+..|.  .|++.|...   .+..+.++....  ..+..+. +-.|   ..+.     
T Consensus        10 l~~k~~lVTGas~gIG~~ia~~L~~~Ga--~Vv~~~~~~~~~~~~~~~~i~~~g--~~~~~~~~Dv~d~~~~~~~~~~~~   85 (306)
T PRK07792         10 LSGKVAVVTGAAAGLGRAEALGLARLGA--TVVVNDVASALDASDVLDEIRAAG--AKAVAVAGDISQRATADELVATAV   85 (306)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCC--EEEEecCCchhHHHHHHHHHHhcC--CeEEEEeCCCCCHHHHHHHHHHHH
Confidence            3456899999999999999999999887  899999754   222233343221  1222211 1112   1121     


Q ss_pred             -hCCCcEEEEcCCCCC
Q 018512          108 -LTGMDLVIIPAGVPR  122 (354)
Q Consensus       108 -l~~aDvVIi~ag~~~  122 (354)
                       +...|+||+.||...
T Consensus        86 ~~g~iD~li~nAG~~~  101 (306)
T PRK07792         86 GLGGLDIVVNNAGITR  101 (306)
T ss_pred             HhCCCCEEEECCCCCC
Confidence             246899999998754

>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase

Probab=96.55  E-value=0.012  Score=50.01  Aligned_cols=75  Identities=23%  Similarity=0.285  Sum_probs=49.9

Q ss_pred             CCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc--hhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEc
Q 018512           40 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIP  117 (354)
Q Consensus        40 ~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~--~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~  117 (354)
                      .+.++|+|+|+ |.+|..++..|...+ ..++.++|++..  ...+.++....  ....    ..+..+.++++|+||.+
T Consensus        17 ~~~~~i~iiG~-G~~g~~~a~~l~~~g-~~~v~v~~r~~~~~~~~~~~~~~~~--~~~~----~~~~~~~~~~~Dvvi~~   88 (155)
T cd01065          17 LKGKKVLILGA-GGAARAVAYALAELG-AAKIVIVNRTLEKAKALAERFGELG--IAIA----YLDLEELLAEADLIINT   88 (155)
T ss_pred             CCCCEEEEECC-cHHHHHHHHHHHHCC-CCEEEEEcCCHHHHHHHHHHHhhcc--ccee----ecchhhccccCCEEEeC
Confidence            34569999999 999999999998876 348999999762  22222222110  0111    12445668999999998


Q ss_pred             CCCCC
Q 018512          118 AGVPR  122 (354)
Q Consensus       118 ag~~~  122 (354)
                      .....
T Consensus        89 ~~~~~   93 (155)
T cd01065          89 TPVGM   93 (155)
T ss_pred             cCCCC
Confidence            65543

Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann

>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=96.54  E-value=0.16  Score=46.86  Aligned_cols=148  Identities=14%  Similarity=0.192  Sum_probs=77.2

Q ss_pred             CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC---chhHHHHHhcCCCCCeEEEEe-CCCc---HH-------h
Q 018512           41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN---TPGVTADISHMDTGAVVRGFL-GQPQ---LE-------N  106 (354)
Q Consensus        41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~---~~g~~~dl~~~~~~~~v~~~~-~~~d---~~-------~  106 (354)
                      +.++|.|+||++.+|..++..|+..|.  .|++.+...   ......++.... ...+..+. +-+|   .+       +
T Consensus         7 ~~k~vlItGas~gIG~~ia~~l~~~G~--~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~   83 (260)
T PRK08416          7 KGKTLVISGGTRGIGKAIVYEFAQSGV--NIAFTYNSNVEEANKIAEDLEQKY-GIKAKAYPLNILEPETYKELFKKIDE   83 (260)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC--EEEEEcCCCHHHHHHHHHHHHHhc-CCceEEEEcCCCCHHHHHHHHHHHHH
Confidence            345899999999999999999999887  788775433   222233333211 11122111 1122   11       2


Q ss_pred             hhCCCcEEEEcCCCCCC-----CC----CCH---HHHHHHHH----HHHHHHHHHHhhhCCCeEEEEecCCCCCchHHHH
Q 018512          107 ALTGMDLVIIPAGVPRK-----PG----MTR---DDLFNINA----GIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAA  170 (354)
Q Consensus       107 al~~aDvVIi~ag~~~~-----~g----~~r---~d~~~~n~----~~~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~  170 (354)
                      .+...|++|+.||....     .+    .+.   ...+..|+    ...+.+.+.+++. +.+.|+++|...+..     
T Consensus        84 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~g~iv~isS~~~~~-----  157 (260)
T PRK08416         84 DFDRVDFFISNAIISGRAVVGGYTKFMRLKPKGLNNIYTATVNAFVVGAQEAAKRMEKV-GGGSIISLSSTGNLV-----  157 (260)
T ss_pred             hcCCccEEEECccccccccccccCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHhhhcc-CCEEEEEEecccccc-----
Confidence            23468999999875311     01    111   11233333    3344555555543 345566665433221     


Q ss_pred             HHHHHhCCCCCCCEEEeccchHHHHHHHHHHHhC
Q 018512          171 EVFKKAGTYDPKKLLGVTMLDVVRANTFVAEVLG  204 (354)
Q Consensus       171 ~~~~~~~~~p~~kviG~t~ld~~r~~~~la~~l~  204 (354)
                             ..|..-.++.+......+.+.++..++
T Consensus       158 -------~~~~~~~Y~asK~a~~~~~~~la~el~  184 (260)
T PRK08416        158 -------YIENYAGHGTSKAAVETMVKYAATELG  184 (260)
T ss_pred             -------CCCCcccchhhHHHHHHHHHHHHHHhh
Confidence                   122222345555555567777777764

>PRK07201 short chain dehydrogenase; Provisional

Probab=96.53  E-value=0.038  Score=58.09  Aligned_cols=117  Identities=17%  Similarity=0.171  Sum_probs=66.8

Q ss_pred             CCCCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCCCCeEEEEe-CCC---cHHhhhC--
Q 018512           38 GGAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQP---QLENALT--  109 (354)
Q Consensus        38 ~~~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~~~~v~~~~-~~~---d~~~al~--  109 (354)
                      ++.+.+++.|+||+|.+|..++..|+..|.  +|+++++++  ......++....  ..+..+. +-.   +.+++++  
T Consensus       367 ~~~~~k~vlItGas~giG~~la~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~~~~~~~~~  442 (657)
T PRK07201        367 GPLVGKVVLITGASSGIGRATAIKVAEAGA--TVFLVARNGEALDELVAEIRAKG--GTAHAYTCDLTDSAAVDHTVKDI  442 (657)
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHhcC--CcEEEEEecCCCHHHHHHHHHHH
Confidence            344456899999999999999999999887  899999876  222223333221  1122111 112   2233333  


Q ss_pred             -----CCcEEEEcCCCCCCCC---C-----CHHHHHHHHHHHH----HHHHHHHhhhCCCeEEEEec
Q 018512          110 -----GMDLVIIPAGVPRKPG---M-----TRDDLFNINAGIV----RTLCEGIAKCCPNATVNLIS  159 (354)
Q Consensus       110 -----~aDvVIi~ag~~~~~g---~-----~r~d~~~~n~~~~----~~i~~~i~~~~p~a~viv~t  159 (354)
                           ..|++|+.||......   .     .....+..|+...    +.+.+.+++.. .+.|+++|
T Consensus       443 ~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~g~iv~is  508 (657)
T PRK07201        443 LAEHGHVDYLVNNAGRSIRRSVENSTDRFHDYERTMAVNYFGAVRLILGLLPHMRERR-FGHVVNVS  508 (657)
T ss_pred             HHhcCCCCEEEECCCCCCCCChhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcC-CCEEEEEC
Confidence                 6899999998642211   0     1122345565544    44444444433 45566665

>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.53  E-value=0.034  Score=50.24  Aligned_cols=107  Identities=18%  Similarity=0.156  Sum_probs=62.4

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeC-CCc----HHhhhCCCcEEEE
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLG-QPQ----LENALTGMDLVII  116 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~-~~d----~~~al~~aDvVIi  116 (354)
                      .+++.|+||+|.+|.+++..|+..|.  +|++.|++....    .   .  ..+..+.. -++    ..+.+...|+||+
T Consensus         5 ~k~~lVtGas~~iG~~ia~~l~~~G~--~v~~~~r~~~~~----~---~--~~~~~~~~D~~~~~~~~~~~~~~id~lv~   73 (235)
T PRK06550          5 TKTVLITGAASGIGLAQARAFLAQGA--QVYGVDKQDKPD----L---S--GNFHFLQLDLSDDLEPLFDWVPSVDILCN   73 (235)
T ss_pred             CCEEEEcCCCchHHHHHHHHHHHCCC--EEEEEeCCcccc----c---C--CcEEEEECChHHHHHHHHHhhCCCCEEEE
Confidence            35899999999999999999999887  899999875210    0   0  11111110 011    1233567899999


Q ss_pred             cCCCCCC--C--CCCH---HHHHHHHHHHHHHHHHHHhhh---CCCeEEEEec
Q 018512          117 PAGVPRK--P--GMTR---DDLFNINAGIVRTLCEGIAKC---CPNATVNLIS  159 (354)
Q Consensus       117 ~ag~~~~--~--g~~r---~d~~~~n~~~~~~i~~~i~~~---~p~a~viv~t  159 (354)
                      .+|....  +  ..+.   ...+..|+.....+.+.+...   ...+.++++|
T Consensus        74 ~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~s  126 (235)
T PRK06550         74 TAGILDDYKPLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLERKSGIIINMC  126 (235)
T ss_pred             CCCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEc
Confidence            9985421  1  1122   234556665555555554432   2235555555

>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E

Probab=96.53  E-value=0.017  Score=51.85  Aligned_cols=37  Identities=27%  Similarity=0.409  Sum_probs=32.0

Q ss_pred             CCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC
Q 018512           40 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   78 (354)
Q Consensus        40 ~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~   78 (354)
                      .+..||+|+|+ |.+|+.++..|+..|.. +|.++|.+.
T Consensus        19 l~~~~VlviG~-GglGs~ia~~La~~Gv~-~i~lvD~d~   55 (202)
T TIGR02356        19 LLNSHVLIIGA-GGLGSPAALYLAGAGVG-TIVIVDDDH   55 (202)
T ss_pred             hcCCCEEEECC-CHHHHHHHHHHHHcCCC-eEEEecCCE
Confidence            34558999999 99999999999998863 899999884

coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.

>KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis]

Probab=96.53  E-value=0.019  Score=54.82  Aligned_cols=110  Identities=20%  Similarity=0.137  Sum_probs=70.8

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC---ch--hHHHHHhcCCCCCeEEEEeC-CCc---HHhhh--CC
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN---TP--GVTADISHMDTGAVVRGFLG-QPQ---LENAL--TG  110 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~---~~--g~~~dl~~~~~~~~v~~~~~-~~d---~~~al--~~  110 (354)
                      +++|.|+||+|++|++.+..|+.+|.  +++.+|...   ..  ..+..+.+.  ...+..... -.|   +++-+  ..
T Consensus         2 ~~~VLVtGgaGyiGsht~l~L~~~gy--~v~~vDNl~n~~~~sl~r~~~l~~~--~~~v~f~~~Dl~D~~~L~kvF~~~~   77 (343)
T KOG1371|consen    2 GKHVLVTGGAGYIGSHTVLALLKRGY--GVVIVDNLNNSYLESLKRVRQLLGE--GKSVFFVEGDLNDAEALEKLFSEVK   77 (343)
T ss_pred             CcEEEEecCCcceehHHHHHHHhCCC--cEEEEecccccchhHHHHHHHhcCC--CCceEEEEeccCCHHHHHHHHhhcC
Confidence            35899999999999999999999998  899999865   11  112223322  122322211 112   22222  45


Q ss_pred             CcEEEEcCCCCCC-CC-CCHHHHHHHHHHHHHHHHHHHhhhCCCeEE
Q 018512          111 MDLVIIPAGVPRK-PG-MTRDDLFNINAGIVRTLCEGIAKCCPNATV  155 (354)
Q Consensus       111 aDvVIi~ag~~~~-~g-~~r~d~~~~n~~~~~~i~~~i~~~~p~a~v  155 (354)
                      -|-|++.|+.... +. +....+...|+-...++.+.|++++-..+|
T Consensus        78 fd~V~Hfa~~~~vgeS~~~p~~Y~~nNi~gtlnlLe~~~~~~~~~~V  124 (343)
T KOG1371|consen   78 FDAVMHFAALAAVGESMENPLSYYHNNIAGTLNLLEVMKAHNVKALV  124 (343)
T ss_pred             CceEEeehhhhccchhhhCchhheehhhhhHHHHHHHHHHcCCceEE
Confidence            7889998765421 11 224566778999999999999999844433

>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.52  E-value=0.023  Score=51.62  Aligned_cols=35  Identities=26%  Similarity=0.371  Sum_probs=31.3

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   78 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~   78 (354)
                      ..++.|+|++|.+|+.++..|+..|.  .|+++|++.
T Consensus         5 ~~~~lItG~~g~iG~~~a~~l~~~G~--~vi~~~r~~   39 (253)
T PRK08217          5 DKVIVITGGAQGLGRAMAEYLAQKGA--KLALIDLNQ   39 (253)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCC--EEEEEeCCH
Confidence            45899999999999999999999887  899999876

>PRK08818 prephenate dehydrogenase; Provisional

Probab=96.51  E-value=0.024  Score=55.69  Aligned_cols=56  Identities=23%  Similarity=0.211  Sum_probs=43.3

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcC
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA  118 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~a  118 (354)
                      .+||+|||.+|.+|..++..|.... ..+|+.+|..          +..          ..+.++++++||+||++.
T Consensus         4 ~~~I~IIGl~GliGgslA~alk~~~-~~~V~g~D~~----------d~~----------~~~~~~~v~~aDlVilav   59 (370)
T PRK08818          4 QPVVGIVGSAGAYGRWLARFLRTRM-QLEVIGHDPA----------DPG----------SLDPATLLQRADVLIFSA   59 (370)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhcC-CCEEEEEcCC----------ccc----------cCCHHHHhcCCCEEEEeC
Confidence            4699999988999999999998752 3389999973          110          124567889999999984

>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional

Probab=96.50  E-value=0.032  Score=53.61  Aligned_cols=92  Identities=20%  Similarity=0.257  Sum_probs=60.0

Q ss_pred             CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcCCC
Q 018512           41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGV  120 (354)
Q Consensus        41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~ag~  120 (354)
                      ..++|+|+|. |.+|+.++..|..-|.  +|..+|......     .  .    +..+....++++.+++||+|+++...
T Consensus       135 ~g~tvgIvG~-G~IG~~vA~~l~afG~--~V~~~~~~~~~~-----~--~----~~~~~~~~~l~e~l~~aDvvv~~lPl  200 (312)
T PRK15469        135 EDFTIGILGA-GVLGSKVAQSLQTWGF--PLRCWSRSRKSW-----P--G----VQSFAGREELSAFLSQTRVLINLLPN  200 (312)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCC--EEEEEeCCCCCC-----C--C----ceeecccccHHHHHhcCCEEEECCCC
Confidence            4569999999 9999999999987776  899999754110     0  0    01111123678999999999997422


Q ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 018512          121 PRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  159 (354)
Q Consensus       121 ~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~t  159 (354)
                      .           ..|..++-  .+.+.+..|++++||++
T Consensus       201 t-----------~~T~~li~--~~~l~~mk~ga~lIN~a  226 (312)
T PRK15469        201 T-----------PETVGIIN--QQLLEQLPDGAYLLNLA  226 (312)
T ss_pred             C-----------HHHHHHhH--HHHHhcCCCCcEEEECC
Confidence            1           11222221  23344445789999986

>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.50  E-value=0.026  Score=51.04  Aligned_cols=34  Identities=24%  Similarity=0.304  Sum_probs=31.3

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   78 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~   78 (354)
                      .+|.|+||+|.+|+.++..|+..|.  +|+++++++
T Consensus         6 ~~vlItGa~g~iG~~~a~~l~~~G~--~V~~~~r~~   39 (238)
T PRK05786          6 KKVAIIGVSEGLGYAVAYFALKEGA--QVCINSRNE   39 (238)
T ss_pred             cEEEEECCCchHHHHHHHHHHHCCC--EEEEEeCCH
Confidence            4899999999999999999999888  899999876

>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=96.50  E-value=0.09  Score=49.69  Aligned_cols=120  Identities=18%  Similarity=0.225  Sum_probs=79.3

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCCCCeEEEE----eCCCcHH-------hhh
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGF----LGQPQLE-------NAL  108 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~~~~v~~~----~~~~d~~-------~al  108 (354)
                      .+.|+|+||++-+|.++|+.++..|.  .++|+....  ++-...++.......++...    +..++.+       .-+
T Consensus        12 ~kvVvITGASsGIG~~lA~~la~~G~--~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~~~~f   89 (282)
T KOG1205|consen   12 GKVVLITGASSGIGEALAYELAKRGA--KLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEWAIRHF   89 (282)
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHhCCC--ceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHHHHHhc
Confidence            45799999999999999999999997  778888765  23333555543321112211    1112222       346


Q ss_pred             CCCcEEEEcCCCCCCCCC-C---H---HHHHH----HHHHHHHHHHHHHhhhCCCeEEEEecCCCCCc
Q 018512          109 TGMDLVIIPAGVPRKPGM-T---R---DDLFN----INAGIVRTLCEGIAKCCPNATVNLISNPVNST  165 (354)
Q Consensus       109 ~~aDvVIi~ag~~~~~g~-~---r---~d~~~----~n~~~~~~i~~~i~~~~p~a~viv~tNPv~~~  165 (354)
                      .+.|+.|..||..+ .+. +   .   ...+.    ..+...+...+.|++.+ ++.|++++...+.+
T Consensus        90 g~vDvLVNNAG~~~-~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~-~GhIVvisSiaG~~  155 (282)
T KOG1205|consen   90 GRVDVLVNNAGISL-VGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRN-DGHIVVISSIAGKM  155 (282)
T ss_pred             CCCCEEEecCcccc-ccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcC-CCeEEEEecccccc
Confidence            89999999999887 331 1   1   12223    34678888999999887 88888887766555

>cd01487 E1_ThiF_like E1_ThiF_like

Probab=96.49  E-value=0.03  Score=49.14  Aligned_cols=33  Identities=39%  Similarity=0.550  Sum_probs=29.7

Q ss_pred             eEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC
Q 018512           44 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   78 (354)
Q Consensus        44 kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~   78 (354)
                      ||+|+|+ |.+|+.++..|+..|.. +++|+|.+.
T Consensus         1 ~VlViG~-GglGs~ia~~La~~Gvg-~i~lvD~D~   33 (174)
T cd01487           1 KVGIAGA-GGLGSNIAVLLARSGVG-NLKLVDFDV   33 (174)
T ss_pred             CEEEECc-CHHHHHHHHHHHHcCCC-eEEEEeCCE
Confidence            6899999 99999999999998874 899999985

Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>PRK05708 2-dehydropantoate 2-reductase; Provisional

Probab=96.48  E-value=0.04  Score=52.67  Aligned_cols=115  Identities=16%  Similarity=0.113  Sum_probs=68.6

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcC-------CCCC-eEEEEeCCCcHHhhhCCCcE
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHM-------DTGA-VVRGFLGQPQLENALTGMDL  113 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~-------~~~~-~v~~~~~~~d~~~al~~aDv  113 (354)
                      .|||+|+|+ |.||+.++..|...|.  +|.++++...  ....+...       .... .+...  ..+ .+.....|+
T Consensus         2 ~m~I~IiGa-GaiG~~~a~~L~~~G~--~V~lv~r~~~--~~~~i~~~~Gl~i~~~g~~~~~~~~--~~~-~~~~~~~D~   73 (305)
T PRK05708          2 SMTWHILGA-GSLGSLWACRLARAGL--PVRLILRDRQ--RLAAYQQAGGLTLVEQGQASLYAIP--AET-ADAAEPIHR   73 (305)
T ss_pred             CceEEEECC-CHHHHHHHHHHHhCCC--CeEEEEechH--HHHHHhhcCCeEEeeCCcceeeccC--CCC-cccccccCE
Confidence            479999999 9999999999998887  8999998631  11111110       0000 01111  111 123567899


Q ss_pred             EEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhh-CCCeEEEEecCCCCCchHHHHHHHHHhCCCCCCCEEEe
Q 018512          114 VIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKC-CPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV  187 (354)
Q Consensus       114 VIi~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~-~p~a~viv~tNPv~~~~~~~~~~~~~~~~~p~~kviG~  187 (354)
                      ||++.-..                -..+.++.++.+ .++..|+..-|=++....     +.+.  +|.+++++-
T Consensus        74 viv~vK~~----------------~~~~al~~l~~~l~~~t~vv~lQNGv~~~e~-----l~~~--~~~~~v~~g  125 (305)
T PRK05708         74 LLLACKAY----------------DAEPAVASLAHRLAPGAELLLLQNGLGSQDA-----VAAR--VPHARCIFA  125 (305)
T ss_pred             EEEECCHH----------------hHHHHHHHHHhhCCCCCEEEEEeCCCCCHHH-----HHHh--CCCCcEEEE
Confidence            99984211                122334445444 378888888898877643     2343  566677665

>PRK05479 ketol-acid reductoisomerase; Provisional

Probab=96.46  E-value=0.022  Score=55.03  Aligned_cols=68  Identities=18%  Similarity=0.111  Sum_probs=47.6

Q ss_pred             CCCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcC
Q 018512           39 GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA  118 (354)
Q Consensus        39 ~~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~a  118 (354)
                      ..+.+||+|||. |++|.+++..|...|.  +|+..+.+....... .....    +..    .+..+++++||+|+++.
T Consensus        14 ~L~gktIgIIG~-GsmG~AlA~~L~~sG~--~Vvv~~r~~~~s~~~-A~~~G----~~~----~s~~eaa~~ADVVvLaV   81 (330)
T PRK05479         14 LIKGKKVAIIGY-GSQGHAHALNLRDSGV--DVVVGLREGSKSWKK-AEADG----FEV----LTVAEAAKWADVIMILL   81 (330)
T ss_pred             hhCCCEEEEEee-HHHHHHHHHHHHHCCC--EEEEEECCchhhHHH-HHHCC----Cee----CCHHHHHhcCCEEEEcC
Confidence            445679999999 9999999999998887  888877754211111 11111    111    25678999999999984

>PLN02503 fatty acyl-CoA reductase 2

Probab=96.46  E-value=0.043  Score=57.36  Aligned_cols=117  Identities=15%  Similarity=0.071  Sum_probs=71.7

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCC-CCcEEEEEecCC--c--hhHH-HHHhc-----------CC-----CCCeEEEEe
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINP-LVSVLHLYDVVN--T--PGVT-ADISH-----------MD-----TGAVVRGFL   99 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~-~~~ei~L~D~~~--~--~g~~-~dl~~-----------~~-----~~~~v~~~~   99 (354)
                      .++|.|+||+||+|..++..|+... -..+|+++.+..  .  .... .++.+           ..     ...++..+.
T Consensus       119 ~k~VlVTGaTGFLGk~LlekLLr~~~~v~kIy~LvR~k~~~~a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~~Ki~~v~  198 (605)
T PLN02503        119 GKNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKAKDKEAAIERLKNEVIDAELFKCLQETHGKSYQSFMLSKLVPVV  198 (605)
T ss_pred             CCEEEEcCCchHHHHHHHHHHHHhCCCCcEEEEEEecCCchhHHHHHHHHHhhhhhHHHHHHhcCccccccccccEEEEE
Confidence            4799999999999999999888754 355788887754  1  1111 11111           00     011233221


Q ss_pred             CC----------CcHHhhhCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEec
Q 018512          100 GQ----------PQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLIS  159 (354)
Q Consensus       100 ~~----------~d~~~al~~aDvVIi~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~-p~a~viv~t  159 (354)
                      +.          .+++...++.|+||++|+... ...........|+....++++.+.+.. .+.+|.+.|
T Consensus       199 GDl~d~~LGLs~~~~~~L~~~vDiVIH~AA~v~-f~~~~~~a~~vNV~GT~nLLelA~~~~~lk~fV~vST  268 (605)
T PLN02503        199 GNVCESNLGLEPDLADEIAKEVDVIINSAANTT-FDERYDVAIDINTRGPCHLMSFAKKCKKLKLFLQVST  268 (605)
T ss_pred             eeCCCcccCCCHHHHHHHHhcCCEEEECccccc-cccCHHHHHHHHHHHHHHHHHHHHHcCCCCeEEEccC
Confidence            11          122334478999999987653 233455667889999999999988764 344444444

>PTZ00431 pyrroline carboxylate reductase; Provisional

Probab=96.42  E-value=0.016  Score=54.17  Aligned_cols=61  Identities=13%  Similarity=0.219  Sum_probs=43.7

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCC--cEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcC
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLV--SVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA  118 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~--~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~a  118 (354)
                      .|||+|||+ |.+|++++..|...+..  .+++.+|+++..     +   .    ...   ..+..++++++|+||++.
T Consensus         3 ~mkI~iIG~-G~mG~ai~~~l~~~~~~~~~~i~~~~~~~~~-----~---~----~~~---~~~~~~~~~~~D~Vilav   65 (260)
T PTZ00431          3 NIRVGFIGL-GKMGSALAYGIENSNIIGKENIYYHTPSKKN-----T---P----FVY---LQSNEELAKTCDIIVLAV   65 (260)
T ss_pred             CCEEEEECc-cHHHHHHHHHHHhCCCCCcceEEEECCChhc-----C---C----eEE---eCChHHHHHhCCEEEEEe
Confidence            479999999 99999999999887632  358888876421     0   0    111   123456788999999983

>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.42  E-value=0.02  Score=54.59  Aligned_cols=79  Identities=20%  Similarity=0.310  Sum_probs=58.8

Q ss_pred             CCCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcC
Q 018512           39 GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA  118 (354)
Q Consensus        39 ~~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~a  118 (354)
                      +-..++|+|||.+|.||..++..|...+.  +|.+++...                       .++++..+.||+||.+.
T Consensus       156 ~l~Gk~V~vIG~s~ivG~PmA~~L~~~ga--tVtv~~~~t-----------------------~~l~e~~~~ADIVIsav  210 (301)
T PRK14194        156 DLTGKHAVVIGRSNIVGKPMAALLLQAHC--SVTVVHSRS-----------------------TDAKALCRQADIVVAAV  210 (301)
T ss_pred             CCCCCEEEEECCCCccHHHHHHHHHHCCC--EEEEECCCC-----------------------CCHHHHHhcCCEEEEec
Confidence            34567999999966999999999998887  888887542                       14577889999999998


Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec-CCC
Q 018512          119 GVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS-NPV  162 (354)
Q Consensus       119 g~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~t-NPv  162 (354)
                      |.+..-.   .++                 ..|.++||-++ |++
T Consensus       211 g~~~~v~---~~~-----------------ik~GaiVIDvgin~~  235 (301)
T PRK14194        211 GRPRLID---ADW-----------------LKPGAVVIDVGINRI  235 (301)
T ss_pred             CChhccc---Hhh-----------------ccCCcEEEEeccccc
Confidence            7663211   111                 34788888886 654

>PRK12824 acetoacetyl-CoA reductase; Provisional

Probab=96.42  E-value=0.036  Score=50.14  Aligned_cols=113  Identities=19%  Similarity=0.176  Sum_probs=63.6

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc---hhHHHHHhcCCCCCeEEEEe-CCCc---HHhhh-------
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT---PGVTADISHMDTGAVVRGFL-GQPQ---LENAL-------  108 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~---~g~~~dl~~~~~~~~v~~~~-~~~d---~~~al-------  108 (354)
                      .+|.|+|++|.+|+.++..|+..|.  .|++.|++..   ......+...  ...+..+. +-.+   ..+++       
T Consensus         3 k~vlItG~s~~iG~~la~~l~~~g~--~vi~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~v~~~~~~~~~~~   78 (245)
T PRK12824          3 KIALVTGAKRGIGSAIARELLNDGY--RVIATYFSGNDCAKDWFEEYGFT--EDQVRLKELDVTDTEECAEALAEIEEEE   78 (245)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHcCC--EEEEEeCCcHHHHHHHHHHhhcc--CCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            3789999999999999999998886  8999998742   1111111111  11222221 1112   22222       


Q ss_pred             CCCcEEEEcCCCCCCC---CCCH---HHHHHHHHHHHHHH----HHHHhhhCCCeEEEEecC
Q 018512          109 TGMDLVIIPAGVPRKP---GMTR---DDLFNINAGIVRTL----CEGIAKCCPNATVNLISN  160 (354)
Q Consensus       109 ~~aDvVIi~ag~~~~~---g~~r---~d~~~~n~~~~~~i----~~~i~~~~p~a~viv~tN  160 (354)
                      ...|+||+.+|.....   ..+.   ...+..|+.....+    .+.+++. +.+.++++|.
T Consensus        79 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~iss  139 (245)
T PRK12824         79 GPVDILVNNAGITRDSVFKRMSHQEWNDVINTNLNSVFNVTQPLFAAMCEQ-GYGRIINISS  139 (245)
T ss_pred             CCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHh-CCeEEEEECC
Confidence            3589999998864211   1122   23345666655554    4444443 3456666664

>PRK07574 formate dehydrogenase; Provisional

Probab=96.41  E-value=0.028  Score=55.62  Aligned_cols=101  Identities=17%  Similarity=0.220  Sum_probs=63.0

Q ss_pred             CCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcCC
Q 018512           40 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG  119 (354)
Q Consensus        40 ~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~ag  119 (354)
                      -..++|.|+|. |.+|+.+|..|..-|.  +|+.+|+........  ....    +..   ..++++.++.||+|++...
T Consensus       190 L~gktVGIvG~-G~IG~~vA~~l~~fG~--~V~~~dr~~~~~~~~--~~~g----~~~---~~~l~ell~~aDvV~l~lP  257 (385)
T PRK07574        190 LEGMTVGIVGA-GRIGLAVLRRLKPFDV--KLHYTDRHRLPEEVE--QELG----LTY---HVSFDSLVSVCDVVTIHCP  257 (385)
T ss_pred             cCCCEEEEECC-CHHHHHHHHHHHhCCC--EEEEECCCCCchhhH--hhcC----cee---cCCHHHHhhcCCEEEEcCC
Confidence            45679999999 9999999999987676  999999865211111  1111    121   1357889999999999743


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec--CCCCCc
Q 018512          120 VPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS--NPVNST  165 (354)
Q Consensus       120 ~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~t--NPv~~~  165 (354)
                      ..           ..+-.++-  .+.+....+.+++||++  ..+|.-
T Consensus       258 lt-----------~~T~~li~--~~~l~~mk~ga~lIN~aRG~iVDe~  292 (385)
T PRK07574        258 LH-----------PETEHLFD--ADVLSRMKRGSYLVNTARGKIVDRD  292 (385)
T ss_pred             CC-----------HHHHHHhC--HHHHhcCCCCcEEEECCCCchhhHH
Confidence            21           11111221  22333345788999886  444443

>PRK15059 tartronate semialdehyde reductase; Provisional

Probab=96.41  E-value=0.014  Score=55.49  Aligned_cols=63  Identities=16%  Similarity=0.307  Sum_probs=46.1

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcC
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA  118 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~a  118 (354)
                      |||+|||. |.+|+.++..|+..|+  ++.++|+++.   ..++.....    ..   ..+..++.++||+||++.
T Consensus         1 m~Ig~IGl-G~MG~~ma~~L~~~G~--~v~v~~~~~~---~~~~~~~g~----~~---~~s~~~~~~~advVi~~v   63 (292)
T PRK15059          1 MKLGFIGL-GIMGTPMAINLARAGH--QLHVTTIGPV---ADELLSLGA----VS---VETARQVTEASDIIFIMV   63 (292)
T ss_pred             CeEEEEcc-CHHHHHHHHHHHHCCC--eEEEEeCCHh---HHHHHHcCC----ee---cCCHHHHHhcCCEEEEeC
Confidence            58999999 9999999999999997  8889998752   122322211    11   124567789999999974

>PRK07577 short chain dehydrogenase; Provisional

Probab=96.41  E-value=0.038  Score=49.77  Aligned_cols=35  Identities=20%  Similarity=0.134  Sum_probs=31.5

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   78 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~   78 (354)
                      .++|.|+||+|.+|..++..|+..|.  +|++++++.
T Consensus         3 ~k~vlItG~s~~iG~~ia~~l~~~G~--~v~~~~r~~   37 (234)
T PRK07577          3 SRTVLVTGATKGIGLALSLRLANLGH--QVIGIARSA   37 (234)
T ss_pred             CCEEEEECCCCcHHHHHHHHHHHCCC--EEEEEeCCc
Confidence            35899999999999999999999887  899999875

>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase

Probab=96.40  E-value=0.081  Score=47.74  Aligned_cols=113  Identities=17%  Similarity=0.173  Sum_probs=61.1

Q ss_pred             eEEEEcCCCchHHHHHHHHHhCCCCcEEEEEec-CCc--hhHHHHHhcCCCCCeEEEEeCCCc---H-------HhhhCC
Q 018512           44 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDV-VNT--PGVTADISHMDTGAVVRGFLGQPQ---L-------ENALTG  110 (354)
Q Consensus        44 kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~-~~~--~g~~~dl~~~~~~~~v~~~~~~~d---~-------~~al~~  110 (354)
                      .+.|+||+|.+|..++..|+..|.  ++++... +..  .....++............ +-++   +       .+.+..
T Consensus         2 ~~lItG~sg~iG~~la~~l~~~G~--~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~-D~~~~~~~~~~~~~~~~~~~~   78 (242)
T TIGR01829         2 IALVTGGMGGIGTAICQRLAKDGY--RVAANCGPNEERAEAWLQEQGALGFDFRVVEG-DVSSFESCKAAVAKVEAELGP   78 (242)
T ss_pred             EEEEECCCChHHHHHHHHHHHCCC--EEEEEeCCCHHHHHHHHHHHHhhCCceEEEEe-cCCCHHHHHHHHHHHHHHcCC
Confidence            578999999999999999999887  7888776 321  1111222211111111111 1122   1       122346


Q ss_pred             CcEEEEcCCCCCCC---CCC---HHHHHHHHHHHHHH----HHHHHhhhCCCeEEEEecC
Q 018512          111 MDLVIIPAGVPRKP---GMT---RDDLFNINAGIVRT----LCEGIAKCCPNATVNLISN  160 (354)
Q Consensus       111 aDvVIi~ag~~~~~---g~~---r~d~~~~n~~~~~~----i~~~i~~~~p~a~viv~tN  160 (354)
                      .|.||+++|.....   ..+   ..+.+..|+.....    +.+.+++. +.+.|+++|.
T Consensus        79 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~iss  137 (242)
T TIGR01829        79 IDVLVNNAGITRDATFKKMTYEQWSAVIDTNLNSVFNVTQPVIDGMRER-GWGRIINISS  137 (242)
T ss_pred             CcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCcEEEEEcc
Confidence            89999999864321   112   22334566665444    44444443 3345666654

(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.

>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]

Probab=96.40  E-value=0.014  Score=48.26  Aligned_cols=71  Identities=24%  Similarity=0.309  Sum_probs=44.3

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhH-HHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEc
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGV-TADISHMDTGAVVRGFLGQPQLENALTGMDLVIIP  117 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~-~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~  117 (354)
                      |||.|+|++|.+|+.++..+...+-..=+..+|.+.  ..|. ..++.... ...+..   ++++++.+..+|+||-.
T Consensus         1 mrV~i~G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~~~~~g~d~g~~~~~~-~~~~~v---~~~l~~~~~~~DVvIDf   74 (124)
T PF01113_consen    1 MRVGIVGASGRMGRAIAEAILESPGFELVGAVDRKPSAKVGKDVGELAGIG-PLGVPV---TDDLEELLEEADVVIDF   74 (124)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHSTTEEEEEEEETTTSTTTTSBCHHHCTSS-T-SSBE---BS-HHHHTTH-SEEEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCCcEEEEEEecCCcccccchhhhhhCcC-Cccccc---chhHHHhcccCCEEEEc
Confidence            699999999999999999998855332356677765  1111 12222221 122222   35788889999998886

In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....

>PRK12938 acetyacetyl-CoA reductase; Provisional

Probab=96.39  E-value=0.049  Score=49.54  Aligned_cols=114  Identities=15%  Similarity=0.151  Sum_probs=60.9

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEe-cCCc--hhHHHHHhcCCCCCeEEEEeCCCc---HHhh-------hC
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYD-VVNT--PGVTADISHMDTGAVVRGFLGQPQ---LENA-------LT  109 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D-~~~~--~g~~~dl~~~~~~~~v~~~~~~~d---~~~a-------l~  109 (354)
                      +.+.|+||+|.+|..++..|+..|.  ++++.. .+..  .....++........... .+-.|   ..++       +.
T Consensus         4 k~~lVtG~s~giG~~~a~~l~~~G~--~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~D~~~~~~~~~~~~~~~~~~~   80 (246)
T PRK12938          4 RIAYVTGGMGGIGTSICQRLHKDGF--KVVAGCGPNSPRRVKWLEDQKALGFDFIASE-GNVGDWDSTKAAFDKVKAEVG   80 (246)
T ss_pred             CEEEEECCCChHHHHHHHHHHHcCC--EEEEEcCCChHHHHHHHHHHHhcCCcEEEEE-cCCCCHHHHHHHHHHHHHHhC
Confidence            4689999999999999999999987  677754 3321  112223322211111111 11122   2222       34


Q ss_pred             CCcEEEEcCCCCCCC---CCC---HHHHHHHHHHHHH----HHHHHHhhhCCCeEEEEecC
Q 018512          110 GMDLVIIPAGVPRKP---GMT---RDDLFNINAGIVR----TLCEGIAKCCPNATVNLISN  160 (354)
Q Consensus       110 ~aDvVIi~ag~~~~~---g~~---r~d~~~~n~~~~~----~i~~~i~~~~p~a~viv~tN  160 (354)
                      ..|+||+++|.....   ..+   ....+..|+....    .+.+.+.+. ..+.|+++|.
T Consensus        81 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~isS  140 (246)
T PRK12938         81 EIDVLVNNAGITRDVVFRKMTREDWTAVIDTNLTSLFNVTKQVIDGMVER-GWGRIINISS  140 (246)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCeEEEEEec
Confidence            689999999875321   112   2234556665544    444444433 2345666553

>PRK07578 short chain dehydrogenase; Provisional

Probab=96.39  E-value=0.052  Score=47.90  Aligned_cols=101  Identities=19%  Similarity=0.179  Sum_probs=58.5

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHh---hhCCCcEEEEcCC
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLEN---ALTGMDLVIIPAG  119 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~---al~~aDvVIi~ag  119 (354)
                      |++.|+||+|.+|..++..|... .  +|++.+++.. ....|+.+.            .++++   .+...|+||..+|
T Consensus         1 ~~vlItGas~giG~~la~~l~~~-~--~vi~~~r~~~-~~~~D~~~~------------~~~~~~~~~~~~id~lv~~ag   64 (199)
T PRK07578          1 MKILVIGASGTIGRAVVAELSKR-H--EVITAGRSSG-DVQVDITDP------------ASIRALFEKVGKVDAVVSAAG   64 (199)
T ss_pred             CeEEEEcCCcHHHHHHHHHHHhc-C--cEEEEecCCC-ceEecCCCh------------HHHHHHHHhcCCCCEEEECCC
Confidence            58999999999999999999877 3  8999987541 011122211            11122   2347899999998


Q ss_pred             CCCCC---CCCHHH---HHHHHHHHHHHHHHHHhhhC-CCeEEEEec
Q 018512          120 VPRKP---GMTRDD---LFNINAGIVRTLCEGIAKCC-PNATVNLIS  159 (354)
Q Consensus       120 ~~~~~---g~~r~d---~~~~n~~~~~~i~~~i~~~~-p~a~viv~t  159 (354)
                      .....   ..+..+   .+..|+.....+.+.+.++- +.+.++++|
T Consensus        65 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~is  111 (199)
T PRK07578         65 KVHFAPLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLNDGGSFTLTS  111 (199)
T ss_pred             CCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEc
Confidence            64211   122222   23455555455555444332 345555554

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.39  E-value=0.039  Score=55.47  Aligned_cols=118  Identities=20%  Similarity=0.254  Sum_probs=68.8

Q ss_pred             CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEE-EeCCCcHHhh-------hCCCc
Q 018512           41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRG-FLGQPQLENA-------LTGMD  112 (354)
Q Consensus        41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~-~~~~~d~~~a-------l~~aD  112 (354)
                      +..++.|+||+|.+|..++..|+..|.  +++++|.........++........+.. +....+.++.       +...|
T Consensus       209 ~g~~vlItGasggIG~~la~~l~~~Ga--~vi~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id  286 (450)
T PRK08261        209 AGKVALVTGAARGIGAAIAEVLARDGA--HVVCLDVPAAGEALAAVANRVGGTALALDITAPDAPARIAEHLAERHGGLD  286 (450)
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCC--EEEEEeCCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHHHHhCCCCC
Confidence            346899999999999999999998887  8999998542222222221110011111 1111111111       23689


Q ss_pred             EEEEcCCCCCCC---CCC---HHHHHHHHHHHHHHHHHHHhhh---CCCeEEEEecC
Q 018512          113 LVIIPAGVPRKP---GMT---RDDLFNINAGIVRTLCEGIAKC---CPNATVNLISN  160 (354)
Q Consensus       113 vVIi~ag~~~~~---g~~---r~d~~~~n~~~~~~i~~~i~~~---~p~a~viv~tN  160 (354)
                      +||+++|.....   .++   ....+.-|+.....+.+.+...   .+.+.|+++|.
T Consensus       287 ~vi~~AG~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~g~iv~~SS  343 (450)
T PRK08261        287 IVVHNAGITRDKTLANMDEARWDSVLAVNLLAPLRITEALLAAGALGDGGRIVGVSS  343 (450)
T ss_pred             EEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhhcCCCEEEEECC
Confidence            999999865321   122   2334567777777777777652   24466776663

>PRK08644 thiamine biosynthesis protein ThiF; Provisional

Probab=96.35  E-value=0.035  Score=50.37  Aligned_cols=38  Identities=32%  Similarity=0.379  Sum_probs=32.6

Q ss_pred             CCCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC
Q 018512           39 GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   78 (354)
Q Consensus        39 ~~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~   78 (354)
                      +-+..||+|+|+ |.+|+.++..|+..|.. ++.++|.+.
T Consensus        25 ~L~~~~V~ViG~-GglGs~ia~~La~~Gvg-~i~lvD~D~   62 (212)
T PRK08644         25 KLKKAKVGIAGA-GGLGSNIAVALARSGVG-NLKLVDFDV   62 (212)
T ss_pred             HHhCCCEEEECc-CHHHHHHHHHHHHcCCC-eEEEEeCCE
Confidence            334568999999 99999999999998874 899999983

>PLN02712 arogenate dehydrogenase

Probab=96.35  E-value=0.026  Score=59.79  Aligned_cols=67  Identities=18%  Similarity=0.194  Sum_probs=46.8

Q ss_pred             CCCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhh-CCCcEEEEc
Q 018512           39 GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENAL-TGMDLVIIP  117 (354)
Q Consensus        39 ~~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al-~~aDvVIi~  117 (354)
                      ..+++||+|||. |.+|..++..|...|.  +|+.+|++.....+.   +..    +...   .+..+.+ ++||+||++
T Consensus        49 ~~~~~kIgIIG~-G~mG~slA~~L~~~G~--~V~~~dr~~~~~~A~---~~G----v~~~---~d~~e~~~~~aDvViLa  115 (667)
T PLN02712         49 NTTQLKIAIIGF-GNYGQFLAKTLISQGH--TVLAHSRSDHSLAAR---SLG----VSFF---LDPHDLCERHPDVILLC  115 (667)
T ss_pred             cCCCCEEEEEcc-CHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHH---HcC----CEEe---CCHHHHhhcCCCEEEEc
Confidence            566789999998 9999999999998886  899999874221111   111    1221   3445544 579999998


Q ss_pred             C
Q 018512          118 A  118 (354)
Q Consensus       118 a  118 (354)
                      .
T Consensus       116 v  116 (667)
T PLN02712        116 T  116 (667)
T ss_pred             C
Confidence            4

>cd00762 NAD_bind_malic_enz NAD(P) binding domain of malic enzyme

Probab=96.31  E-value=0.026  Score=52.42  Aligned_cols=123  Identities=17%  Similarity=0.186  Sum_probs=80.4

Q ss_pred             CCCeEEEEcCCCchHHHHHHHHHhCC----C-----CcEEEEEecCC--chh------HHHHHhcCCCCCeEEEEeCCCc
Q 018512           41 AGFKVAILGAAGGIGQPLAMLMKINP----L-----VSVLHLYDVVN--TPG------VTADISHMDTGAVVRGFLGQPQ  103 (354)
Q Consensus        41 ~~~kI~IiGa~G~vG~~~a~~l~~~~----~-----~~ei~L~D~~~--~~g------~~~dl~~~~~~~~v~~~~~~~d  103 (354)
                      +..||+|.|| |..|..++.+|...+    +     ...++++|...  ..+      ....+.+.. .. -.   ...+
T Consensus        24 ~d~riv~~GA-GsAg~gia~ll~~~~~~~Gls~e~A~~~i~~vD~~Gll~~~r~~l~~~~~~~~~~~-~~-~~---~~~~   97 (254)
T cd00762          24 SEHKVLFNGA-GAAALGIANLIVXLXVKEGISKEEACKRIWXVDRKGLLVKNRKETCPNEYHLARFA-NP-ER---ESGD   97 (254)
T ss_pred             hhcEEEEECc-CHHHHHHHHHHHHHHHhcCCCHHHHhccEEEECCCCeEeCCCCccCHHHHHHHHHc-Cc-cc---ccCC
Confidence            3469999999 999999998886533    2     14899999875  111      111111111 11 11   1257


Q ss_pred             HHhhhC--CCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCC--CchHHHHHHHHHhCCC
Q 018512          104 LENALT--GMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVN--STVPIAAEVFKKAGTY  179 (354)
Q Consensus       104 ~~~al~--~aDvVIi~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv~--~~~~~~~~~~~~~~~~  179 (354)
                      +.++++  ++|++|=+.+.+.              -+.+++.+.|.+++++.+|+-.|||..  -.++   +-.++.+  
T Consensus        98 L~eav~~~kptvlIG~S~~~g--------------~ft~evv~~Ma~~~~~PIIFaLSNPt~~aE~tp---e~a~~~t--  158 (254)
T cd00762          98 LEDAVEAAKPDFLIGVSRVGG--------------AFTPEVIRAXAEINERPVIFALSNPTSKAECTA---EEAYTAT--  158 (254)
T ss_pred             HHHHHHhhCCCEEEEeCCCCC--------------CCCHHHHHHHhhcCCCCEEEECCCcCCccccCH---HHHHhhc--
Confidence            899999  9999998765442              145678889999999999999999987  5543   2233433  


Q ss_pred             CCCCEEEec
Q 018512          180 DPKKLLGVT  188 (354)
Q Consensus       180 p~~kviG~t  188 (354)
                      +.+.+++..
T Consensus       159 ~G~ai~AtG  167 (254)
T cd00762         159 EGRAIFASG  167 (254)
T ss_pred             CCCEEEEEC
Confidence            125678873

Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glut

>COG0345 ProC Pyrroline-5-carboxylate reductase [Amino acid transport and metabolism]

Probab=96.31  E-value=0.024  Score=53.15  Aligned_cols=93  Identities=16%  Similarity=0.232  Sum_probs=61.2

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCC-C-CcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcCC
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINP-L-VSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG  119 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~-~-~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~ag  119 (354)
                      ++||++||+ |++|++++..|+..+ + ..+|+..|+++.+..  ++.... .. . .   +++..++...+|+||++. 
T Consensus         1 ~~~IgfIG~-G~Mg~Ai~~gl~~~g~~~~~~I~v~~~~~e~~~--~l~~~~-g~-~-~---~~~~~~~~~~advv~Lav-   70 (266)
T COG0345           1 MMKIGFIGA-GNMGEAILSGLLKSGALPPEEIIVTNRSEEKRA--ALAAEY-GV-V-T---TTDNQEAVEEADVVFLAV-   70 (266)
T ss_pred             CceEEEEcc-CHHHHHHHHHHHhcCCCCcceEEEeCCCHHHHH--HHHHHc-CC-c-c---cCcHHHHHhhCCEEEEEe-
Confidence            479999999 999999999999888 2 358888888652211  233211 11 1 1   245568889999999985 


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 018512          120 VPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  159 (354)
Q Consensus       120 ~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~t  159 (354)
                         ||            ..+.++++.++...++.+||-+.
T Consensus        71 ---KP------------q~~~~vl~~l~~~~~~~lvISia   95 (266)
T COG0345          71 ---KP------------QDLEEVLSKLKPLTKDKLVISIA   95 (266)
T ss_pred             ---Ch------------HhHHHHHHHhhcccCCCEEEEEe
Confidence               22            24566777777644565554443

>PRK06483 dihydromonapterin reductase; Provisional

Probab=96.31  E-value=0.082  Score=47.82  Aligned_cols=34  Identities=21%  Similarity=0.134  Sum_probs=30.8

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   78 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~   78 (354)
                      +++.|+||+|.+|..++..|+..|.  +|++.|+++
T Consensus         3 k~vlItGas~gIG~~ia~~l~~~G~--~V~~~~r~~   36 (236)
T PRK06483          3 APILITGAGQRIGLALAWHLLAQGQ--PVIVSYRTH   36 (236)
T ss_pred             ceEEEECCCChHHHHHHHHHHHCCC--eEEEEeCCc
Confidence            4799999999999999999999887  899999875

>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins

Probab=96.28  E-value=0.041  Score=46.30  Aligned_cols=33  Identities=24%  Similarity=0.508  Sum_probs=29.8

Q ss_pred             eEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC
Q 018512           44 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   78 (354)
Q Consensus        44 kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~   78 (354)
                      ||+|+|+ |.+|+.++..|+..|. .++.++|.+.
T Consensus         1 ~VliiG~-GglGs~ia~~L~~~Gv-~~i~ivD~d~   33 (143)
T cd01483           1 RVLLVGL-GGLGSEIALNLARSGV-GKITLIDFDT   33 (143)
T ss_pred             CEEEECC-CHHHHHHHHHHHHCCC-CEEEEEcCCC
Confidence            6899999 9999999999999987 4899999874

This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.

>PRK06940 short chain dehydrogenase; Provisional

Probab=96.26  E-value=0.047  Score=51.09  Aligned_cols=110  Identities=17%  Similarity=0.199  Sum_probs=61.3

Q ss_pred             eEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc--hhHHHHHhcCCCCCeEEEEe-CCCc---HHhhh------CCC
Q 018512           44 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFL-GQPQ---LENAL------TGM  111 (354)
Q Consensus        44 kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~--~g~~~dl~~~~~~~~v~~~~-~~~d---~~~al------~~a  111 (354)
                      .+.|+|| |.+|..++..|. .|.  +|++.|++..  .....++....  ..+..+. +-.|   .+.++      ...
T Consensus         4 ~~lItGa-~gIG~~la~~l~-~G~--~Vv~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dv~d~~~i~~~~~~~~~~g~i   77 (275)
T PRK06940          4 VVVVIGA-GGIGQAIARRVG-AGK--KVLLADYNEENLEAAAKTLREAG--FDVSTQEVDVSSRESVKALAATAQTLGPV   77 (275)
T ss_pred             EEEEECC-ChHHHHHHHHHh-CCC--EEEEEeCCHHHHHHHHHHHHhcC--CeEEEEEeecCCHHHHHHHHHHHHhcCCC
Confidence            4566676 899999999985 665  8999998752  22223333221  1221110 1112   22222      468


Q ss_pred             cEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecC
Q 018512          112 DLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISN  160 (354)
Q Consensus       112 DvVIi~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~-p~a~viv~tN  160 (354)
                      |++|+.||.... .......+..|+.....+.+.+.+.- +++.+++++.
T Consensus        78 d~li~nAG~~~~-~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~iv~isS  126 (275)
T PRK06940         78 TGLVHTAGVSPS-QASPEAILKVDLYGTALVLEEFGKVIAPGGAGVVIAS  126 (275)
T ss_pred             CEEEECCCcCCc-hhhHHHHHHHhhHHHHHHHHHHHHHHhhCCCEEEEEe
Confidence            999999987521 23345566777766666666555432 2343444443

>PRK06476 pyrroline-5-carboxylate reductase; Reviewed

Probab=96.25  E-value=0.022  Score=52.95  Aligned_cols=68  Identities=18%  Similarity=0.228  Sum_probs=45.4

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCC-CcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcC
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPL-VSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA  118 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~-~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~a  118 (354)
                      |||+|||+ |.+|++++..|...++ ...+.++|++...  ...+....  +.+...   .+..++++++|+||++.
T Consensus         1 m~IgiIG~-G~mG~aia~~L~~~g~~~~~i~v~~r~~~~--~~~l~~~~--~~~~~~---~~~~~~~~~aDvVilav   69 (258)
T PRK06476          1 MKIGFIGT-GAITEAMVTGLLTSPADVSEIIVSPRNAQI--AARLAERF--PKVRIA---KDNQAVVDRSDVVFLAV   69 (258)
T ss_pred             CeEEEECc-CHHHHHHHHHHHhCCCChheEEEECCCHHH--HHHHHHHc--CCceEe---CCHHHHHHhCCEEEEEe
Confidence            58999998 9999999999988774 3456788875422  12222211  112221   34567789999999985

>PLN03139 formate dehydrogenase; Provisional

Probab=96.24  E-value=0.037  Score=54.72  Aligned_cols=101  Identities=21%  Similarity=0.206  Sum_probs=63.1

Q ss_pred             CCCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcC
Q 018512           39 GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA  118 (354)
Q Consensus        39 ~~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~a  118 (354)
                      .-..++|+|+|. |.+|+.++..|..-|.  +|+.+|.........  .+..    +..   ..++++.+++||+|++..
T Consensus       196 ~L~gktVGIVG~-G~IG~~vA~~L~afG~--~V~~~d~~~~~~~~~--~~~g----~~~---~~~l~ell~~sDvV~l~l  263 (386)
T PLN03139        196 DLEGKTVGTVGA-GRIGRLLLQRLKPFNC--NLLYHDRLKMDPELE--KETG----AKF---EEDLDAMLPKCDVVVINT  263 (386)
T ss_pred             CCCCCEEEEEee-cHHHHHHHHHHHHCCC--EEEEECCCCcchhhH--hhcC----cee---cCCHHHHHhhCCEEEEeC
Confidence            345679999999 9999999999987666  899999864211111  1111    111   236788999999999974


Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec--CCCCC
Q 018512          119 GVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS--NPVNS  164 (354)
Q Consensus       119 g~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~t--NPv~~  164 (354)
                      ...           ..+-.++-  .+.+....|.+++||.+  ..+|.
T Consensus       264 Plt-----------~~T~~li~--~~~l~~mk~ga~lIN~aRG~iVDe  298 (386)
T PLN03139        264 PLT-----------EKTRGMFN--KERIAKMKKGVLIVNNARGAIMDT  298 (386)
T ss_pred             CCC-----------HHHHHHhC--HHHHhhCCCCeEEEECCCCchhhH
Confidence            211           11111221  23444445789999886  44443

>COG1712 Predicted dinucleotide-utilizing enzyme [General function prediction only]

Probab=96.24  E-value=0.051  Score=49.35  Aligned_cols=95  Identities=21%  Similarity=0.284  Sum_probs=65.0

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCC-CCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcCCCC
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINP-LVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVP  121 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~-~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~ag~~  121 (354)
                      |||.|||. |.+|..+...+.... .+.-+.+||.+..+.  ..+...-...      ..+++.+.+.+.|+||.+|+  
T Consensus         1 l~vgiVGc-GaIG~~l~e~v~~~~~~~e~v~v~D~~~ek~--~~~~~~~~~~------~~s~ide~~~~~DlvVEaAS--   69 (255)
T COG1712           1 LKVGIVGC-GAIGKFLLELVRDGRVDFELVAVYDRDEEKA--KELEASVGRR------CVSDIDELIAEVDLVVEAAS--   69 (255)
T ss_pred             CeEEEEec-cHHHHHHHHHHhcCCcceeEEEEecCCHHHH--HHHHhhcCCC------ccccHHHHhhccceeeeeCC--
Confidence            68999998 999999988887653 355688899876322  2222221111      11356677799999999975  


Q ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCC
Q 018512          122 RKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPV  162 (354)
Q Consensus       122 ~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv  162 (354)
                                    .+.+++++.++-+.+.|.+|+-++-=+
T Consensus        70 --------------~~Av~e~~~~~L~~g~d~iV~SVGALa   96 (255)
T COG1712          70 --------------PEAVREYVPKILKAGIDVIVMSVGALA   96 (255)
T ss_pred             --------------HHHHHHHhHHHHhcCCCEEEEechhcc
Confidence                          246788888888888888666554333

>PRK06953 short chain dehydrogenase; Provisional

Probab=96.23  E-value=0.076  Score=47.69  Aligned_cols=113  Identities=17%  Similarity=0.179  Sum_probs=64.8

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEE-EeCCCcHHh---hhC--CCcEEEE
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRG-FLGQPQLEN---ALT--GMDLVII  116 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~-~~~~~d~~~---al~--~aDvVIi  116 (354)
                      +++.|+||+|.+|+.++..|+..|.  +|+++|++...  ..++..... ..+.. +....++++   .+.  ..|+||+
T Consensus         2 ~~vlvtG~sg~iG~~la~~L~~~G~--~v~~~~r~~~~--~~~~~~~~~-~~~~~D~~~~~~v~~~~~~~~~~~~d~vi~   76 (222)
T PRK06953          2 KTVLIVGASRGIGREFVRQYRADGW--RVIATARDAAA--LAALQALGA-EALALDVADPASVAGLAWKLDGEALDAAVY   76 (222)
T ss_pred             ceEEEEcCCCchhHHHHHHHHhCCC--EEEEEECCHHH--HHHHHhccc-eEEEecCCCHHHHHHHHHHhcCCCCCEEEE
Confidence            4789999999999999999988887  89999987521  112222111 01111 111112222   133  4899999


Q ss_pred             cCCCCCC---C--CCCH---HHHHHHHHHHHHHHHHHHhhhC--CCeEEEEecC
Q 018512          117 PAGVPRK---P--GMTR---DDLFNINAGIVRTLCEGIAKCC--PNATVNLISN  160 (354)
Q Consensus       117 ~ag~~~~---~--g~~r---~d~~~~n~~~~~~i~~~i~~~~--p~a~viv~tN  160 (354)
                      ++|....   .  ..+.   ...+..|+.....+.+.+.++-  ..+.+++++.
T Consensus        77 ~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iv~isS  130 (222)
T PRK06953         77 VAGVYGPRTEGVEPITREDFDAVMHTNVLGPMQLLPILLPLVEAAGGVLAVLSS  130 (222)
T ss_pred             CCCcccCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHhhhccCCeEEEEcC
Confidence            9886521   1  1122   3345677777667766665432  2344555543

>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit

Probab=96.23  E-value=0.022  Score=54.13  Aligned_cols=97  Identities=21%  Similarity=0.215  Sum_probs=61.7

Q ss_pred             CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcCCC
Q 018512           41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGV  120 (354)
Q Consensus        41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~ag~  120 (354)
                      ...+|+|+|+ |.+|..++..|...|.  +|.++|++....  ........    ..+ ...++.+.++++|+||.+...
T Consensus       150 ~gk~v~IiG~-G~iG~avA~~L~~~G~--~V~v~~R~~~~~--~~~~~~g~----~~~-~~~~l~~~l~~aDiVint~P~  219 (287)
T TIGR02853       150 HGSNVMVLGF-GRTGMTIARTFSALGA--RVFVGARSSADL--ARITEMGL----IPF-PLNKLEEKVAEIDIVINTIPA  219 (287)
T ss_pred             CCCEEEEEcC-hHHHHHHHHHHHHCCC--EEEEEeCCHHHH--HHHHHCCC----eee-cHHHHHHHhccCCEEEECCCh
Confidence            4469999999 9999999999988886  899999875211  11111111    111 123567788999999998521


Q ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEe-cCCCCCc
Q 018512          121 PRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLI-SNPVNST  165 (354)
Q Consensus       121 ~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~-tNPv~~~  165 (354)
                      .         ++  +    .+   .+....+++++|.+ ++|-..-
T Consensus       220 ~---------ii--~----~~---~l~~~k~~aliIDlas~Pg~td  247 (287)
T TIGR02853       220 L---------VL--T----AD---VLSKLPKHAVIIDLASKPGGTD  247 (287)
T ss_pred             H---------Hh--C----HH---HHhcCCCCeEEEEeCcCCCCCC
Confidence            1         01  1    12   22333467888877 5886654

This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.

>PRK06484 short chain dehydrogenase; Validated

Probab=96.22  E-value=0.058  Score=55.10  Aligned_cols=147  Identities=16%  Similarity=0.178  Sum_probs=81.6

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc--hhHHHHHhcCCCCCeEEE-EeCCCcHHhh-------hCCC
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRG-FLGQPQLENA-------LTGM  111 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~--~g~~~dl~~~~~~~~v~~-~~~~~d~~~a-------l~~a  111 (354)
                      .+++.|+||+|.+|..++..|+..|.  .|++.|+++.  +....++.. . ...+.. +....+.++.       +...
T Consensus       269 ~k~~lItGas~gIG~~~a~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~-~-~~~~~~D~~~~~~~~~~~~~~~~~~g~i  344 (520)
T PRK06484        269 PRVVAITGGARGIGRAVADRFAAAGD--RLLIIDRDAEGAKKLAEALGD-E-HLSVQADITDEAAVESAFAQIQARWGRL  344 (520)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHhCC-c-eeEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            46899999999999999999999997  8999998752  111221211 0 001111 1111122222       2457


Q ss_pred             cEEEEcCCCCCC--C--CCC---HHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecCCCCCchHHHHHHHHHhCCCCCCC
Q 018512          112 DLVIIPAGVPRK--P--GMT---RDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNSTVPIAAEVFKKAGTYDPKK  183 (354)
Q Consensus       112 DvVIi~ag~~~~--~--g~~---r~d~~~~n~~~~~~i~~~i~~~~-p~a~viv~tNPv~~~~~~~~~~~~~~~~~p~~k  183 (354)
                      |++|+.||....  +  ..+   ....+.-|+.....+.+.+..+- ..+.|+++|......            +.|..-
T Consensus       345 d~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~------------~~~~~~  412 (520)
T PRK06484        345 DVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQGGVIVNLGSIASLL------------ALPPRN  412 (520)
T ss_pred             CEEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhccCCEEEEECchhhcC------------CCCCCc
Confidence            999999986421  1  122   23345566666555555544432 346777776533222            233333


Q ss_pred             EEEeccchHHHHHHHHHHHhC
Q 018512          184 LLGVTMLDVVRANTFVAEVLG  204 (354)
Q Consensus       184 viG~t~ld~~r~~~~la~~l~  204 (354)
                      .++.+......+.+.+++.++
T Consensus       413 ~Y~asKaal~~l~~~la~e~~  433 (520)
T PRK06484        413 AYCASKAAVTMLSRSLACEWA  433 (520)
T ss_pred             hhHHHHHHHHHHHHHHHHHhh
Confidence            455544444456667776653

>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional

Probab=96.21  E-value=0.093  Score=48.85  Aligned_cols=158  Identities=13%  Similarity=0.201  Sum_probs=80.6

Q ss_pred             CCeEEEEcCCC--chHHHHHHHHHhCCCCcEEEEEecCC-chhHHHHHhcCCCCCe-EEE-EeCCCcHH-------hhhC
Q 018512           42 GFKVAILGAAG--GIGQPLAMLMKINPLVSVLHLYDVVN-TPGVTADISHMDTGAV-VRG-FLGQPQLE-------NALT  109 (354)
Q Consensus        42 ~~kI~IiGa~G--~vG~~~a~~l~~~~~~~ei~L~D~~~-~~g~~~dl~~~~~~~~-v~~-~~~~~d~~-------~al~  109 (354)
                      .+.+.|+||++  .+|..++..|+..|.  .|++.|++. ......++........ +.. +....+.+       +.+.
T Consensus         6 ~k~~lITGas~~~GIG~aia~~la~~G~--~vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g   83 (262)
T PRK07984          6 GKRILVTGVASKLSIAYGIAQAMHREGA--ELAFTYQNDKLKGRVEEFAAQLGSDIVLPCDVAEDASIDAMFAELGKVWP   83 (262)
T ss_pred             CCEEEEeCCCCCccHHHHHHHHHHHCCC--EEEEEecchhHHHHHHHHHhccCCceEeecCCCCHHHHHHHHHHHHhhcC
Confidence            34789999953  699999999999997  789988764 2223333432211111 110 11111121       1233


Q ss_pred             CCcEEEEcCCCCCCC--------CCCHHH---HHHHHHHHHHHHHHHHhhh-CCCeEEEEecCCCCCchHHHHHHHHHhC
Q 018512          110 GMDLVIIPAGVPRKP--------GMTRDD---LFNINAGIVRTLCEGIAKC-CPNATVNLISNPVNSTVPIAAEVFKKAG  177 (354)
Q Consensus       110 ~aDvVIi~ag~~~~~--------g~~r~d---~~~~n~~~~~~i~~~i~~~-~p~a~viv~tNPv~~~~~~~~~~~~~~~  177 (354)
                      ..|++|+.||.....        ..+..+   .+.-|+.....+.+.+... .+.+.|+++|.-....            
T Consensus        84 ~iD~linnAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~iss~~~~~------------  151 (262)
T PRK07984         84 KFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAER------------  151 (262)
T ss_pred             CCCEEEECCccCCccccCCcchhhcCHHHHHHHhhhhhHHHHHHHHHHHHHhcCCcEEEEEecCCCCC------------
Confidence            579999999864211        112222   2344554333333333222 2346677766422111            


Q ss_pred             CCCCCCEEEeccchHHHHHHHHHHHhCCCCCCCcceEE
Q 018512          178 TYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVV  215 (354)
Q Consensus       178 ~~p~~kviG~t~ld~~r~~~~la~~l~v~~~~v~~~v~  215 (354)
                      +.|..-.++.+...-..+.+.+|..++  +..|++..+
T Consensus       152 ~~~~~~~Y~asKaal~~l~~~la~el~--~~gIrVn~i  187 (262)
T PRK07984        152 AIPNYNVMGLAKASLEANVRYMANAMG--PEGVRVNAI  187 (262)
T ss_pred             CCCCcchhHHHHHHHHHHHHHHHHHhc--ccCcEEeee
Confidence            122223455554445567777777763  444544433

>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2

Probab=96.21  E-value=0.075  Score=48.66  Aligned_cols=100  Identities=22%  Similarity=0.303  Sum_probs=62.6

Q ss_pred             CCCCeEEEEcCCCchHHHHHHHHHhCCC-CcEEEEEecCC----chh-----HHHHHhcCCCCCeEEEEeCCCcHHhhhC
Q 018512           40 AAGFKVAILGAAGGIGQPLAMLMKINPL-VSVLHLYDVVN----TPG-----VTADISHMDTGAVVRGFLGQPQLENALT  109 (354)
Q Consensus        40 ~~~~kI~IiGa~G~vG~~~a~~l~~~~~-~~ei~L~D~~~----~~g-----~~~dl~~~~~~~~v~~~~~~~d~~~al~  109 (354)
                      -+..||+|+|| |..|..++..|...|. .++|.++|++.    .+.     ...++.+......   .  ..++.++++
T Consensus        23 l~~~rvlvlGA-GgAg~aiA~~L~~~G~~~~~i~ivdr~gl~~~~r~~~L~~~~~~la~~~~~~~---~--~~~l~~~l~   96 (226)
T cd05311          23 IEEVKIVINGA-GAAGIAIARLLLAAGAKPENIVVVDSKGVIYEGREDDLNPDKNEIAKETNPEK---T--GGTLKEALK   96 (226)
T ss_pred             ccCCEEEEECc-hHHHHHHHHHHHHcCcCcceEEEEeCCCccccccchhhhHHHHHHHHHhccCc---c--cCCHHHHHh
Confidence            34469999999 9999999999988775 23799999983    111     1122222110011   1  125678899


Q ss_pred             CCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCC
Q 018512          110 GMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVN  163 (354)
Q Consensus       110 ~aDvVIi~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv~  163 (354)
                      ++|+||.+.+    +|+-.           .+..+.|   +++.+|+..+||..
T Consensus        97 ~~dvlIgaT~----~G~~~-----------~~~l~~m---~~~~ivf~lsnP~~  132 (226)
T cd05311          97 GADVFIGVSR----PGVVK-----------KEMIKKM---AKDPIVFALANPVP  132 (226)
T ss_pred             cCCEEEeCCC----CCCCC-----------HHHHHhh---CCCCEEEEeCCCCC
Confidence            9999999754    23311           1233333   36777777889974

Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph

>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional

Probab=96.20  E-value=0.033  Score=54.12  Aligned_cols=38  Identities=24%  Similarity=0.187  Sum_probs=32.8

Q ss_pred             CCCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC
Q 018512           39 GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   78 (354)
Q Consensus        39 ~~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~   78 (354)
                      +.+..||+|+|+ |.+|+.++..|+..|.. +|.|+|.+.
T Consensus        21 ~L~~~~VlIiG~-GglGs~va~~La~aGvg-~i~lvD~D~   58 (338)
T PRK12475         21 KIREKHVLIVGA-GALGAANAEALVRAGIG-KLTIADRDY   58 (338)
T ss_pred             hhcCCcEEEECC-CHHHHHHHHHHHHcCCC-EEEEEcCCc
Confidence            344568999999 99999999999999864 899999974

>PRK08605 D-lactate dehydrogenase; Validated

Probab=96.19  E-value=0.023  Score=55.05  Aligned_cols=64  Identities=27%  Similarity=0.388  Sum_probs=45.5

Q ss_pred             CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcC
Q 018512           41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA  118 (354)
Q Consensus        41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~a  118 (354)
                      ..++|+|||. |.+|+.+|..|+. +..-+|+.+|......    ....     +.   ...++++++++||+|+++.
T Consensus       145 ~g~~VgIIG~-G~IG~~vA~~L~~-~~g~~V~~~d~~~~~~----~~~~-----~~---~~~~l~ell~~aDvIvl~l  208 (332)
T PRK08605        145 KDLKVAVIGT-GRIGLAVAKIFAK-GYGSDVVAYDPFPNAK----AATY-----VD---YKDTIEEAVEGADIVTLHM  208 (332)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHh-cCCCEEEEECCCccHh----HHhh-----cc---ccCCHHHHHHhCCEEEEeC
Confidence            4579999999 9999999999853 3333899999865221    1110     11   1236788999999999985

>KOG2305 consensus 3-hydroxyacyl-CoA dehydrogenase [Lipid transport and metabolism]

Probab=96.18  E-value=0.0058  Score=55.41  Aligned_cols=105  Identities=19%  Similarity=0.264  Sum_probs=67.3

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC------chhHHH---HHhcCCC-CC------eEEEEeCCCcHHh
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN------TPGVTA---DISHMDT-GA------VVRGFLGQPQLEN  106 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~------~~g~~~---dl~~~~~-~~------~v~~~~~~~d~~~  106 (354)
                      -||+|+|. |.+|+..|..++..|.  +|.|||+.+      ++....   +|+.... ..      .+..+++++++.|
T Consensus         4 ~ki~ivgS-gl~g~~WAmlFAs~Gy--qVqlYDI~e~Ql~~ALen~~Kel~~Lee~g~lrGnlsa~eqla~is~t~~l~E   80 (313)
T KOG2305|consen    4 GKIAIVGS-GLVGSSWAMLFASSGY--QVQLYDILEKQLQTALENVEKELRKLEEHGLLRGNLSADEQLALISGTTSLNE   80 (313)
T ss_pred             cceeEeec-ccccchHHHHHhccCc--eEEEeeccHHHHHHHHHHHHHHHHHHHHhhhhccCccHHHHHHHHhCCccHHH
Confidence            48999998 9999999999999999  999999976      122222   3332211 11      1112345677888


Q ss_pred             hhCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecCCCCCch
Q 018512          107 ALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNSTV  166 (354)
Q Consensus       107 al~~aDvVIi~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~-p~a~viv~tNPv~~~~  166 (354)
                      ..++|=+|-.+              ..+.+...+++.+++++.. |..  |+.|....++.
T Consensus        81 ~vk~Ai~iQEc--------------vpE~L~lkk~ly~qlD~i~d~~t--IlaSSTSt~mp  125 (313)
T KOG2305|consen   81 LVKGAIHIQEC--------------VPEDLNLKKQLYKQLDEIADPTT--ILASSTSTFMP  125 (313)
T ss_pred             HHhhhhhHHhh--------------chHhhHHHHHHHHHHHHhcCCce--EEeccccccCh
Confidence            88887444333              2344566777888888776 454  55665554443

>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related

Probab=96.17  E-value=0.048  Score=47.86  Aligned_cols=95  Identities=24%  Similarity=0.319  Sum_probs=59.3

Q ss_pred             CCCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcC
Q 018512           39 GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA  118 (354)
Q Consensus        39 ~~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~a  118 (354)
                      .-...+|.|+|. |.+|+.+|..+..-|.  +|+.+|+......  ...+..    +..    .++++.++.||+|++..
T Consensus        33 ~l~g~tvgIiG~-G~IG~~vA~~l~~fG~--~V~~~d~~~~~~~--~~~~~~----~~~----~~l~ell~~aDiv~~~~   99 (178)
T PF02826_consen   33 ELRGKTVGIIGY-GRIGRAVARRLKAFGM--RVIGYDRSPKPEE--GADEFG----VEY----VSLDELLAQADIVSLHL   99 (178)
T ss_dssp             -STTSEEEEEST-SHHHHHHHHHHHHTT---EEEEEESSCHHHH--HHHHTT----EEE----SSHHHHHHH-SEEEE-S
T ss_pred             ccCCCEEEEEEE-cCCcCeEeeeeecCCc--eeEEecccCChhh--hccccc----cee----eehhhhcchhhhhhhhh
Confidence            445679999999 9999999999997777  9999999763221  112211    111    36788999999999975


Q ss_pred             CC-CCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecC
Q 018512          119 GV-PRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISN  160 (354)
Q Consensus       119 g~-~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tN  160 (354)
                      .. +...++-..           +   .+.+..+++++||++-
T Consensus       100 plt~~T~~li~~-----------~---~l~~mk~ga~lvN~aR  128 (178)
T PF02826_consen  100 PLTPETRGLINA-----------E---FLAKMKPGAVLVNVAR  128 (178)
T ss_dssp             SSSTTTTTSBSH-----------H---HHHTSTTTEEEEESSS
T ss_pred             ccccccceeeee-----------e---eeeccccceEEEeccc
Confidence            32 222222111           1   1223347889999873

All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....

>COG0287 TyrA Prephenate dehydrogenase [Amino acid transport and metabolism]

Probab=96.16  E-value=0.025  Score=53.50  Aligned_cols=69  Identities=25%  Similarity=0.273  Sum_probs=42.9

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCc-HHhhhCCCcEEEEcC
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQ-LENALTGMDLVIIPA  118 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d-~~~al~~aDvVIi~a  118 (354)
                      .++|+|+|. |.+|..++..|...++  .+..++.+...+....-.....    ... .+.+ ..++.++||+||++.
T Consensus         3 ~~~v~IvG~-GliG~s~a~~l~~~g~--~v~i~g~d~~~~~~~~a~~lgv----~d~-~~~~~~~~~~~~aD~Vivav   72 (279)
T COG0287           3 SMKVGIVGL-GLMGGSLARALKEAGL--VVRIIGRDRSAATLKAALELGV----IDE-LTVAGLAEAAAEADLVIVAV   72 (279)
T ss_pred             CcEEEEECC-chHHHHHHHHHHHcCC--eEEEEeecCcHHHHHHHhhcCc----ccc-cccchhhhhcccCCEEEEec
Confidence            479999998 9999999999999999  5555555542211110111110    000 0112 257788999999984

>PRK06125 short chain dehydrogenase; Provisional

Probab=96.16  E-value=0.25  Score=45.32  Aligned_cols=114  Identities=19%  Similarity=0.180  Sum_probs=64.4

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCCCCeEEEE-eCCCcH---H---hhhCCCc
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGF-LGQPQL---E---NALTGMD  112 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~~~~v~~~-~~~~d~---~---~al~~aD  112 (354)
                      .+++.|+|++|.+|..++..|+..|.  +|++.|++.  ......++.... ...+..+ .+-++.   .   +.+...|
T Consensus         7 ~k~vlItG~~~giG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~D~~~~~~~~~~~~~~g~id   83 (259)
T PRK06125          7 GKRVLITGASKGIGAAAAEAFAAEGC--HLHLVARDADALEALAADLRAAH-GVDVAVHALDLSSPEAREQLAAEAGDID   83 (259)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHHHHhhc-CCceEEEEecCCCHHHHHHHHHHhCCCC
Confidence            45899999999999999999999887  899999875  222223333211 1112111 111121   1   2346799


Q ss_pred             EEEEcCCCCCCC---CCCH---HHHHHHHHHH----HHHHHHHHhhhCCCeEEEEec
Q 018512          113 LVIIPAGVPRKP---GMTR---DDLFNINAGI----VRTLCEGIAKCCPNATVNLIS  159 (354)
Q Consensus       113 vVIi~ag~~~~~---g~~r---~d~~~~n~~~----~~~i~~~i~~~~p~a~viv~t  159 (354)
                      ++|+++|.....   ..+.   ...+..|+..    .+.+.+.+++.. .+.|+++|
T Consensus        84 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~is  139 (259)
T PRK06125         84 ILVNNAGAIPGGGLDDVDDAAWRAGWELKVFGYIDLTRLAYPRMKARG-SGVIVNVI  139 (259)
T ss_pred             EEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CcEEEEec
Confidence            999998864211   1122   2234455543    444445554432 34556554

>PRK08306 dipicolinate synthase subunit A; Reviewed

Probab=96.14  E-value=0.029  Score=53.56  Aligned_cols=68  Identities=19%  Similarity=0.216  Sum_probs=48.3

Q ss_pred             CCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc-hhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcC
Q 018512           40 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT-PGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA  118 (354)
Q Consensus        40 ~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~-~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~a  118 (354)
                      ....||+|+|+ |.+|..++..|...|.  +|.++|++.. ...+.   ....    +.. ...++.+.++++|+||.+.
T Consensus       150 l~g~kvlViG~-G~iG~~~a~~L~~~Ga--~V~v~~r~~~~~~~~~---~~G~----~~~-~~~~l~~~l~~aDiVI~t~  218 (296)
T PRK08306        150 IHGSNVLVLGF-GRTGMTLARTLKALGA--NVTVGARKSAHLARIT---EMGL----SPF-HLSELAEEVGKIDIIFNTI  218 (296)
T ss_pred             CCCCEEEEECC-cHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHH---HcCC----eee-cHHHHHHHhCCCCEEEECC
Confidence            34579999999 9999999999988776  9999999752 22222   1111    111 1235677889999999985

>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional

Probab=96.12  E-value=0.055  Score=49.84  Aligned_cols=35  Identities=20%  Similarity=0.156  Sum_probs=30.2

Q ss_pred             CCeEEEEcCC--CchHHHHHHHHHhCCCCcEEEEEecCC
Q 018512           42 GFKVAILGAA--GGIGQPLAMLMKINPLVSVLHLYDVVN   78 (354)
Q Consensus        42 ~~kI~IiGa~--G~vG~~~a~~l~~~~~~~ei~L~D~~~   78 (354)
                      .+.+.|+||+  +.+|..++..|+..|.  +|++.+++.
T Consensus         7 ~k~~lItGas~~~gIG~a~a~~la~~G~--~Vi~~~r~~   43 (252)
T PRK06079          7 GKKIVVMGVANKRSIAWGCAQAIKDQGA--TVIYTYQND   43 (252)
T ss_pred             CCEEEEeCCCCCCchHHHHHHHHHHCCC--EEEEecCch
Confidence            4579999997  5899999999999987  899998864

>PRK06718 precorrin-2 dehydrogenase; Reviewed

Probab=96.12  E-value=0.042  Score=49.41  Aligned_cols=71  Identities=14%  Similarity=0.090  Sum_probs=46.4

Q ss_pred             CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcCC
Q 018512           41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG  119 (354)
Q Consensus        41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~ag  119 (354)
                      +.+||.|||| |.+|...+..|...|.  +|++++.+... ...++.+..   .+......-+ ++.+.++|+||.+.+
T Consensus         9 ~~k~vLVIGg-G~va~~ka~~Ll~~ga--~V~VIs~~~~~-~l~~l~~~~---~i~~~~~~~~-~~~l~~adlViaaT~   79 (202)
T PRK06718          9 SNKRVVIVGG-GKVAGRRAITLLKYGA--HIVVISPELTE-NLVKLVEEG---KIRWKQKEFE-PSDIVDAFLVIAATN   79 (202)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCC--eEEEEcCCCCH-HHHHHHhCC---CEEEEecCCC-hhhcCCceEEEEcCC
Confidence            3459999999 9999999999998886  89999864322 222333221   1222111112 456899999988743

>KOG2666 consensus UDP-glucose/GDP-mannose dehydrogenase [Carbohydrate transport and metabolism; Signal transduction mechanisms]

Probab=96.10  E-value=0.025  Score=53.65  Aligned_cols=76  Identities=25%  Similarity=0.424  Sum_probs=48.2

Q ss_pred             CCeEEEEcCCCchHHHHHHHHH-hCCCCcEEEEEecCCch--------------hHHHHHhcCCCCCeEEEEeCCCcHHh
Q 018512           42 GFKVAILGAAGGIGQPLAMLMK-INPLVSVLHLYDVVNTP--------------GVTADISHMDTGAVVRGFLGQPQLEN  106 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~-~~~~~~ei~L~D~~~~~--------------g~~~dl~~~~~~~~v~~~~~~~d~~~  106 (354)
                      .+|||-||| |+||.....-++ ..+. .+|.++|++..+              |...-..++. ...+- +  ++|.+.
T Consensus         1 ~~kicciga-gyvggptcavia~kcp~-i~vtvvd~s~~ri~~wnsd~lpiyepgldevv~~cr-gknlf-f--stdiek   74 (481)
T KOG2666|consen    1 MVKICCIGA-GYVGGPTCAVIALKCPD-IEVTVVDISVPRINAWNSDKLPIYEPGLDEVVKQCR-GKNLF-F--STDIEK   74 (481)
T ss_pred             CceEEEecC-cccCCcchheeeecCCc-eEEEEEecCchHhhcccCCCCcccCCCHHHHHHHhc-CCcee-e--ecchHH
Confidence            369999999 999877654333 3332 399999997611              1111011111 11122 2  468899


Q ss_pred             hhCCCcEEEEcCCCCCC
Q 018512          107 ALTGMDLVIIPAGVPRK  123 (354)
Q Consensus       107 al~~aDvVIi~ag~~~~  123 (354)
                      +++.||+|+++...|.+
T Consensus        75 ai~eadlvfisvntptk   91 (481)
T KOG2666|consen   75 AIKEADLVFISVNTPTK   91 (481)
T ss_pred             HhhhcceEEEEecCCcc
Confidence            99999999998877754

>PRK14806 bifunctional cyclohexadienyl dehydrogenase/ 3-phosphoshikimate 1-carboxyvinyltransferase; Provisional

Probab=96.09  E-value=0.035  Score=59.52  Aligned_cols=68  Identities=21%  Similarity=0.291  Sum_probs=47.4

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcC
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA  118 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~a  118 (354)
                      .||+|||+ |.+|..++..+...++..+|..+|+++...  .........  ..   ...++.++++++|+||++.
T Consensus         4 ~~I~IIG~-G~mG~ala~~l~~~G~~~~V~~~d~~~~~~--~~a~~~g~~--~~---~~~~~~~~~~~aDvVilav   71 (735)
T PRK14806          4 GRVVVIGL-GLIGGSFAKALRERGLAREVVAVDRRAKSL--ELAVSLGVI--DR---GEEDLAEAVSGADVIVLAV   71 (735)
T ss_pred             cEEEEEee-CHHHHHHHHHHHhcCCCCEEEEEECChhHH--HHHHHCCCC--Cc---ccCCHHHHhcCCCEEEECC
Confidence            58999998 999999999999888544799999976221  111111110  01   1235677889999999985

>PRK06484 short chain dehydrogenase; Validated

Probab=96.09  E-value=0.051  Score=55.48  Aligned_cols=35  Identities=26%  Similarity=0.208  Sum_probs=31.3

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   78 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~   78 (354)
                      .+.+.|+||++.+|..++..|+..|.  .|+++|++.
T Consensus         5 ~k~~lITGas~gIG~aia~~l~~~G~--~V~~~~r~~   39 (520)
T PRK06484          5 SRVVLVTGAAGGIGRAACQRFARAGD--QVVVADRNV   39 (520)
T ss_pred             CeEEEEECCCcHHHHHHHHHHHHCCC--EEEEEeCCH
Confidence            45799999999999999999999987  899999875

>PRK13304 L-aspartate dehydrogenase; Reviewed

Probab=96.09  E-value=0.037  Score=51.92  Aligned_cols=68  Identities=18%  Similarity=0.315  Sum_probs=44.4

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCC-CCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcC
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINP-LVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA  118 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~-~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~a  118 (354)
                      +|||+|||. |.+|..++..+...+ ...-+.++|.+...  ..++.... .  ...+   +++++.+.++|+|++++
T Consensus         1 mmrIgIIG~-G~iG~~ia~~l~~~~~~~elv~v~d~~~~~--a~~~a~~~-~--~~~~---~~~~ell~~~DvVvi~a   69 (265)
T PRK13304          1 MLKIGIVGC-GAIASLITKAILSGRINAELYAFYDRNLEK--AENLASKT-G--AKAC---LSIDELVEDVDLVVECA   69 (265)
T ss_pred             CCEEEEECc-cHHHHHHHHHHHcCCCCeEEEEEECCCHHH--HHHHHHhc-C--CeeE---CCHHHHhcCCCEEEEcC
Confidence            479999998 999999999887654 22235678886521  12222211 1  1222   35667679999999986

>TIGR00873 gnd 6-phosphogluconate dehydrogenase, decarboxylating

Probab=96.08  E-value=0.038  Score=56.09  Aligned_cols=97  Identities=12%  Similarity=0.161  Sum_probs=57.7

Q ss_pred             eEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcC-CCCCeEEEEeCCCcHHhhhCCCcEEEEcCCCCC
Q 018512           44 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHM-DTGAVVRGFLGQPQLENALTGMDLVIIPAGVPR  122 (354)
Q Consensus        44 kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~-~~~~~v~~~~~~~d~~~al~~aDvVIi~ag~~~  122 (354)
                      +|+|||. |.+|.++|..|+..|+  +|+++|+++..  +.++... .....+.......++.++++++|+||++.... 
T Consensus         1 ~IG~IGL-G~MG~~mA~nL~~~G~--~V~v~drt~~~--~~~l~~~~~~g~~~~~~~s~~e~v~~l~~~dvIil~v~~~-   74 (467)
T TIGR00873         1 DIGVIGL-AVMGSNLALNMADHGF--TVSVYNRTPEK--TDEFLAEHAKGKKIVGAYSIEEFVQSLERPRKIMLMVKAG-   74 (467)
T ss_pred             CEEEEee-HHHHHHHHHHHHhcCC--eEEEEeCCHHH--HHHHHhhccCCCCceecCCHHHHHhhcCCCCEEEEECCCc-
Confidence            4899999 9999999999999998  99999997622  2223221 00111222211123333456899999874221 


Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhhh-CCCeEEEEecC
Q 018512          123 KPGMTRDDLFNINAGIVRTLCEGIAKC-CPNATVNLISN  160 (354)
Q Consensus       123 ~~g~~r~d~~~~n~~~~~~i~~~i~~~-~p~a~viv~tN  160 (354)
                                    +.+.++++.+..+ .++.+||-.||
T Consensus        75 --------------~~v~~Vi~~l~~~L~~g~iIID~gn   99 (467)
T TIGR00873        75 --------------APVDAVINQLLPLLEKGDIIIDGGN   99 (467)
T ss_pred             --------------HHHHHHHHHHHhhCCCCCEEEECCC
Confidence                          1223333444444 36677787776

This model does not specify whether the cofactor is NADP only (EC 1.1.1.44), NAD only, or both. The model does not assign an EC number for that reason.

>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase

Probab=96.05  E-value=0.0056  Score=60.38  Aligned_cols=75  Identities=21%  Similarity=0.212  Sum_probs=44.9

Q ss_pred             EEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhc-CCCCCeEEEEeC--CCcHHhhhCCCcEEEEcCCCC
Q 018512           45 VAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISH-MDTGAVVRGFLG--QPQLENALTGMDLVIIPAGVP  121 (354)
Q Consensus        45 I~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~-~~~~~~v~~~~~--~~d~~~al~~aDvVIi~ag~~  121 (354)
                      |.|+|+ |.+|+.++..|+......+|++.|++..+.... ... ............  ..++.+.++++|+||.+++..
T Consensus         1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~-~~~~~~~~~~~~~~d~~~~~~l~~~~~~~dvVin~~gp~   78 (386)
T PF03435_consen    1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRNPEKAERL-AEKLLGDRVEAVQVDVNDPESLAELLRGCDVVINCAGPF   78 (386)
T ss_dssp             EEEE---SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHH-HT--TTTTEEEEE--TTTHHHHHHHHTTSSEEEE-SSGG
T ss_pred             CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHH-HhhccccceeEEEEecCCHHHHHHHHhcCCEEEECCccc
Confidence            789999 999999999999887655899999986221111 111 111111111111  123567889999999998643

Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.

>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated

Probab=96.05  E-value=0.048  Score=53.08  Aligned_cols=37  Identities=22%  Similarity=0.226  Sum_probs=32.2

Q ss_pred             CCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC
Q 018512           40 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   78 (354)
Q Consensus        40 ~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~   78 (354)
                      -+..||+|+|+ |.+|+.++..|+..|.. +|.++|.+.
T Consensus        22 L~~~~VlVvG~-GglGs~va~~La~aGvg-~i~lvD~D~   58 (339)
T PRK07688         22 LREKHVLIIGA-GALGTANAEMLVRAGVG-KVTIVDRDY   58 (339)
T ss_pred             hcCCcEEEECC-CHHHHHHHHHHHHcCCC-eEEEEeCCc
Confidence            34458999999 99999999999999874 899999974

>PRK00048 dihydrodipicolinate reductase; Provisional

Probab=96.04  E-value=0.25  Score=46.06  Aligned_cols=143  Identities=20%  Similarity=0.174  Sum_probs=76.1

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcCCCC
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVP  121 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~ag~~  121 (354)
                      +|||+|+|++|.+|+.++..+...+...-+.++|.+......  ...    ..+.   ..+|+++.++++|+||... .|
T Consensus         1 ~mkV~IiG~~G~mG~~i~~~l~~~~~~elvav~d~~~~~~~~--~~~----~~i~---~~~dl~~ll~~~DvVid~t-~p   70 (257)
T PRK00048          1 MIKVAVAGASGRMGRELIEAVEAAEDLELVAAVDRPGSPLVG--QGA----LGVA---ITDDLEAVLADADVLIDFT-TP   70 (257)
T ss_pred             CcEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCccccc--cCC----CCcc---ccCCHHHhccCCCEEEECC-CH
Confidence            479999998899999999887765433334558876521110  111    1121   2357778788999999763 11


Q ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCCchHHHHHHHHHhCCCCCC-CEEEe-ccchH---HHHH
Q 018512          122 RKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPK-KLLGV-TMLDV---VRAN  196 (354)
Q Consensus       122 ~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~~~~~~~~~~p~~-kviG~-t~ld~---~r~~  196 (354)
                                     ....+++..+.+.+.+.  + +. |.+....-+ +.+.++..  .. -++.. ..+..   .++-
T Consensus        71 ---------------~~~~~~~~~al~~G~~v--v-ig-ttG~s~~~~-~~l~~aa~--~~~v~~s~n~s~g~~~~~~l~  128 (257)
T PRK00048         71 ---------------EATLENLEFALEHGKPL--V-IG-TTGFTEEQL-AELEEAAK--KIPVVIAPNFSIGVNLLMKLA  128 (257)
T ss_pred             ---------------HHHHHHHHHHHHcCCCE--E-EE-CCCCCHHHH-HHHHHHhc--CCCEEEECcchHHHHHHHHHH
Confidence                           12345566666565543  2 33 333222111 12233221  11 22222 22222   3444


Q ss_pred             HHHHHHhCCCCCCCcceEEeecCC
Q 018512          197 TFVAEVLGLDPRDVDVPVVGGHAG  220 (354)
Q Consensus       197 ~~la~~l~v~~~~v~~~v~G~hg~  220 (354)
                      ..+++.|+  +  .++.++--|+.
T Consensus       129 ~~aa~~l~--~--~d~ei~E~HH~  148 (257)
T PRK00048        129 EKAAKYLG--D--YDIEIIEAHHR  148 (257)
T ss_pred             HHHHHhcC--C--CCEEEEEccCC
Confidence            55555664  2  67788888877

>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA

Probab=96.03  E-value=0.042  Score=50.28  Aligned_cols=36  Identities=31%  Similarity=0.416  Sum_probs=31.5

Q ss_pred             CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC
Q 018512           41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   78 (354)
Q Consensus        41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~   78 (354)
                      +..||+|+|+ |.+|+.++..|+..|.. ++.|+|.+.
T Consensus        20 ~~~~VlivG~-GglGs~va~~La~~Gvg-~i~lvD~D~   55 (228)
T cd00757          20 KNARVLVVGA-GGLGSPAAEYLAAAGVG-KLGLVDDDV   55 (228)
T ss_pred             hCCcEEEECC-CHHHHHHHHHHHHcCCC-EEEEEcCCE
Confidence            3458999999 99999999999998864 899999874

Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).

>TIGR02371 ala_DH_arch alanine dehydrogenase, Archaeoglobus fulgidus type

Probab=95.98  E-value=0.038  Score=53.39  Aligned_cols=74  Identities=15%  Similarity=0.141  Sum_probs=51.4

Q ss_pred             CCCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEE
Q 018512           39 GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVII  116 (354)
Q Consensus        39 ~~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi  116 (354)
                      +....+++|||+ |..|...+..+.......+|.++|++.  ++..+.++.+.  ...+..   ..+.++++++||+|+.
T Consensus       125 ~~~~~~lgiiG~-G~qA~~~l~al~~~~~~~~v~V~~r~~~~~~~~~~~~~~~--g~~v~~---~~~~~eav~~aDiVit  198 (325)
T TIGR02371       125 RKDSSVLGIIGA-GRQAWTQLEALSRVFDLEEVSVYCRTPSTREKFALRASDY--EVPVRA---ATDPREAVEGCDILVT  198 (325)
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEECCCHHHHHHHHHHHHhh--CCcEEE---eCCHHHHhccCCEEEE
Confidence            445679999999 999998766665544567999999987  23333444432  222333   2467899999999998


Q ss_pred             cC
Q 018512          117 PA  118 (354)
Q Consensus       117 ~a  118 (354)
                      +.
T Consensus       199 aT  200 (325)
T TIGR02371       199 TT  200 (325)
T ss_pred             ec
Confidence            64

This enzyme, a homolog of bacterial ornithine cyclodeaminases and marsupial mu-crystallins, is a homodimeric, NAD-dependent alanine dehydrogenase found in Archaeoglobus fulgidus and several other Archaea. For a number of close homologs, scoring between trusted and noise cutoffs, it is not clear at present what is the enzymatic activity.

>KOG4039 consensus Serine/threonine kinase TIP30/CC3 [Signal transduction mechanisms]

Probab=95.96  E-value=0.041  Score=48.23  Aligned_cols=110  Identities=23%  Similarity=0.182  Sum_probs=72.5

Q ss_pred             CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEE----EeCCCcHHhhhCCCcEEEE
Q 018512           41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRG----FLGQPQLENALTGMDLVII  116 (354)
Q Consensus        41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~----~~~~~d~~~al~~aDvVIi  116 (354)
                      ++|...|+||+|-+|+.+...+...+.++.|+++-++++       -+..+...+..    +..-.++.++++|.|+.+.
T Consensus        17 q~~s~fvlGAtG~~G~~llk~~~E~~~FSKV~~i~RR~~-------~d~at~k~v~q~~vDf~Kl~~~a~~~qg~dV~Fc   89 (238)
T KOG4039|consen   17 QNMSGFVLGATGLCGGGLLKHAQEAPQFSKVYAILRREL-------PDPATDKVVAQVEVDFSKLSQLATNEQGPDVLFC   89 (238)
T ss_pred             hccceEEEeccccccHHHHHHHHhcccceeEEEEEeccC-------CCccccceeeeEEechHHHHHHHhhhcCCceEEE
Confidence            344567999999999999999999999999999988651       11111111111    1111356788999999999


Q ss_pred             cCCCCC-CCC---CCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCC
Q 018512          117 PAGVPR-KPG---MTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPV  162 (354)
Q Consensus       117 ~ag~~~-~~g---~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv  162 (354)
                      +-|..+ +.|   ..+-|     -..+.+.++..++.+-+.++++.|--+
T Consensus        90 aLgTTRgkaGadgfykvD-----hDyvl~~A~~AKe~Gck~fvLvSS~GA  134 (238)
T KOG4039|consen   90 ALGTTRGKAGADGFYKVD-----HDYVLQLAQAAKEKGCKTFVLVSSAGA  134 (238)
T ss_pred             eecccccccccCceEeec-----hHHHHHHHHHHHhCCCeEEEEEeccCC
Confidence            765443 333   22222     245567777777777788888776433

>PLN02928 oxidoreductase family protein

Probab=95.95  E-value=0.038  Score=53.95  Aligned_cols=104  Identities=23%  Similarity=0.166  Sum_probs=60.8

Q ss_pred             CCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHh--cCCCCCeEEEEeCCCcHHhhhCCCcEEEEc
Q 018512           40 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADIS--HMDTGAVVRGFLGQPQLENALTGMDLVIIP  117 (354)
Q Consensus        40 ~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~--~~~~~~~v~~~~~~~d~~~al~~aDvVIi~  117 (354)
                      -..++|.|+|. |.+|+.+|..+..-|.  +|+.+|+.........+.  ...............++++.++.||+|++.
T Consensus       157 l~gktvGIiG~-G~IG~~vA~~l~afG~--~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~ell~~aDiVvl~  233 (347)
T PLN02928        157 LFGKTVFILGY-GAIGIELAKRLRPFGV--KLLATRRSWTSEPEDGLLIPNGDVDDLVDEKGGHEDIYEFAGEADIVVLC  233 (347)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHhhCCC--EEEEECCCCChhhhhhhccccccccccccccCcccCHHHHHhhCCEEEEC
Confidence            34579999999 9999999999986666  999999863111111110  000000000000124688999999999997


Q ss_pred             CCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 018512          118 AGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  159 (354)
Q Consensus       118 ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~t  159 (354)
                      ....  +         .|-.++.  .+.+.+..|.+++||++
T Consensus       234 lPlt--~---------~T~~li~--~~~l~~Mk~ga~lINva  262 (347)
T PLN02928        234 CTLT--K---------ETAGIVN--DEFLSSMKKGALLVNIA  262 (347)
T ss_pred             CCCC--h---------HhhcccC--HHHHhcCCCCeEEEECC
Confidence            4321  1         1111111  23344445789999997

>PRK13302 putative L-aspartate dehydrogenase; Provisional

Probab=95.94  E-value=0.07  Score=50.22  Aligned_cols=71  Identities=24%  Similarity=0.231  Sum_probs=45.5

Q ss_pred             CCCCeEEEEcCCCchHHHHHHHHHhC-CCCcEEE-EEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEc
Q 018512           40 AAGFKVAILGAAGGIGQPLAMLMKIN-PLVSVLH-LYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIP  117 (354)
Q Consensus        40 ~~~~kI~IiGa~G~vG~~~a~~l~~~-~~~~ei~-L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~  117 (354)
                      .+++||+|||. |.+|..++..|... +.. +++ ++|+++..  +.++.......  ..   .+++++.+.++|+|+++
T Consensus         4 m~~irIGIIG~-G~IG~~~a~~L~~~~~~~-el~aV~dr~~~~--a~~~a~~~g~~--~~---~~~~eell~~~D~Vvi~   74 (271)
T PRK13302          4 RPELRVAIAGL-GAIGKAIAQALDRGLPGL-TLSAVAVRDPQR--HADFIWGLRRP--PP---VVPLDQLATHADIVVEA   74 (271)
T ss_pred             CCeeEEEEECc-cHHHHHHHHHHHhcCCCe-EEEEEECCCHHH--HHHHHHhcCCC--cc---cCCHHHHhcCCCEEEEC
Confidence            45689999999 99999999888763 222 554 78886522  12222111001  11   23567778999999998


Q ss_pred             CC
Q 018512          118 AG  119 (354)
Q Consensus       118 ag  119 (354)
                      +.
T Consensus        75 tp   76 (271)
T PRK13302         75 AP   76 (271)
T ss_pred             CC
Confidence            64

>PF02423 OCD_Mu_crystall: Ornithine cyclodeaminase/mu-crystallin family; InterPro: IPR003462 This entry represents the bacterial ornithine cyclodeaminase enzyme family, which catalyse the deamination of ornithine to proline []

Probab=95.91  E-value=0.031  Score=53.71  Aligned_cols=74  Identities=15%  Similarity=0.218  Sum_probs=47.1

Q ss_pred             CCCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEE
Q 018512           39 GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVII  116 (354)
Q Consensus        39 ~~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi  116 (354)
                      +....+++|||+ |..+..-+..+..--.+.+|.++|++.  ++..+.++.+ . ...+...   .+.++|+++||+|+.
T Consensus       125 ~~~~~~l~viGa-G~QA~~~~~a~~~~~~i~~v~v~~r~~~~~~~~~~~~~~-~-~~~v~~~---~~~~~av~~aDii~t  198 (313)
T PF02423_consen  125 RPDARTLGVIGA-GVQARWHLRALAAVRPIKEVRVYSRSPERAEAFAARLRD-L-GVPVVAV---DSAEEAVRGADIIVT  198 (313)
T ss_dssp             -TT--EEEEE---SHHHHHHHHHHHHHS--SEEEEE-SSHHHHHHHHHHHHC-C-CTCEEEE---SSHHHHHTTSSEEEE
T ss_pred             cCCCceEEEECC-CHHHHHHHHHHHHhCCceEEEEEccChhHHHHHHHhhcc-c-cccceec---cchhhhcccCCEEEE
Confidence            444558999999 998888777665533378999999987  4455666776 2 3445443   467899999999998


Q ss_pred             cC
Q 018512          117 PA  118 (354)
Q Consensus       117 ~a  118 (354)
                      +.
T Consensus       199 aT  200 (313)
T PF02423_consen  199 AT  200 (313)
T ss_dssp             --
T ss_pred             cc
Confidence            53

The family also includes mu-crystallin, a mammalian homologue of bacterial ornithine cyclodeaminase [], which is the major component of the eye lens in several Australian marsupials. mRNA for mu-crystallin has also been found in human retina [].; PDB: 1U7H_B 1X7D_B 2I99_B 3HDJ_A 1VLL_B 1OMO_A.

>PRK08291 ectoine utilization protein EutC; Validated

Probab=95.91  E-value=0.052  Score=52.54  Aligned_cols=75  Identities=15%  Similarity=0.232  Sum_probs=50.5

Q ss_pred             CCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEc
Q 018512           40 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIP  117 (354)
Q Consensus        40 ~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~  117 (354)
                      ...++|+|+|+ |..|...+..+.....+.+|.+++++.  ++..+.++.+.. ...+..   ..++++++.+||+||.+
T Consensus       130 ~~~~~v~IiGa-G~~a~~~~~al~~~~~~~~V~v~~R~~~~a~~l~~~~~~~~-g~~v~~---~~d~~~al~~aDiVi~a  204 (330)
T PRK08291        130 EDASRAAVIGA-GEQARLQLEALTLVRPIREVRVWARDAAKAEAYAADLRAEL-GIPVTV---ARDVHEAVAGADIIVTT  204 (330)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHhhcc-CceEEE---eCCHHHHHccCCEEEEe
Confidence            34569999999 999998877776533356999999986  333344443221 122332   24678999999999887


Q ss_pred             CC
Q 018512          118 AG  119 (354)
Q Consensus       118 ag  119 (354)
                      ..
T Consensus       205 T~  206 (330)
T PRK08291        205 TP  206 (330)
T ss_pred             eC
Confidence            43

>PLN02494 adenosylhomocysteinase

Probab=95.90  E-value=0.18  Score=50.97  Aligned_cols=93  Identities=22%  Similarity=0.180  Sum_probs=61.6

Q ss_pred             CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCch-hHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcCC
Q 018512           41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP-GVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG  119 (354)
Q Consensus        41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~-g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~ag  119 (354)
                      ...+|+|+|. |.+|..++..+...|.  +|+.+|+++.+ ..+.  .+ .+  .  .    .+++++++++|+||.+.|
T Consensus       253 aGKtVvViGy-G~IGr~vA~~aka~Ga--~VIV~e~dp~r~~eA~--~~-G~--~--v----v~leEal~~ADVVI~tTG  318 (477)
T PLN02494        253 AGKVAVICGY-GDVGKGCAAAMKAAGA--RVIVTEIDPICALQAL--ME-GY--Q--V----LTLEDVVSEADIFVTTTG  318 (477)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCC--EEEEEeCCchhhHHHH--hc-CC--e--e----ccHHHHHhhCCEEEECCC
Confidence            4569999999 9999999999987776  89999998632 1221  11 11  1  1    135678999999999755


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCC
Q 018512          120 VPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNS  164 (354)
Q Consensus       120 ~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv~~  164 (354)
                      ...               ++.  .+.+....+.+++++++-+.+.
T Consensus       319 t~~---------------vI~--~e~L~~MK~GAiLiNvGr~~~e  346 (477)
T PLN02494        319 NKD---------------IIM--VDHMRKMKNNAIVCNIGHFDNE  346 (477)
T ss_pred             Ccc---------------chH--HHHHhcCCCCCEEEEcCCCCCc
Confidence            321               110  2333344578999999876433

>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]

Probab=95.88  E-value=0.26  Score=46.63  Aligned_cols=113  Identities=17%  Similarity=0.325  Sum_probs=72.7

Q ss_pred             CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCCCCeEEEE-eCC----------CcHHhh
Q 018512           41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGF-LGQ----------PQLENA  107 (354)
Q Consensus        41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~~~~v~~~-~~~----------~d~~~a  107 (354)
                      ....|.|+||++-+|..+|..++..+.  .++|.|++.  .+..+..+.+..   .+..+ .+-          ...++.
T Consensus        37 ~g~~vLITGgg~GlGr~ialefa~rg~--~~vl~Din~~~~~etv~~~~~~g---~~~~y~cdis~~eei~~~a~~Vk~e  111 (300)
T KOG1201|consen   37 SGEIVLITGGGSGLGRLIALEFAKRGA--KLVLWDINKQGNEETVKEIRKIG---EAKAYTCDISDREEIYRLAKKVKKE  111 (300)
T ss_pred             cCCEEEEeCCCchHHHHHHHHHHHhCC--eEEEEeccccchHHHHHHHHhcC---ceeEEEecCCCHHHHHHHHHHHHHh
Confidence            345899999988999999999999887  899999997  333344444321   11111 000          123566


Q ss_pred             hCCCcEEEEcCCCC-CCCC--CCHHHH---HHHH----HHHHHHHHHHHhhhCCCeEEEEec
Q 018512          108 LTGMDLVIIPAGVP-RKPG--MTRDDL---FNIN----AGIVRTLCEGIAKCCPNATVNLIS  159 (354)
Q Consensus       108 l~~aDvVIi~ag~~-~~~g--~~r~d~---~~~n----~~~~~~i~~~i~~~~p~a~viv~t  159 (354)
                      ..+.|++|..||.. .+.-  .++.+.   +.-|    .-.++++.+.|.+. .++.|+.++
T Consensus       112 ~G~V~ILVNNAGI~~~~~ll~~~d~ei~k~~~vN~~~~f~t~kaFLP~M~~~-~~GHIV~Ia  172 (300)
T KOG1201|consen  112 VGDVDILVNNAGIVTGKKLLDCSDEEIQKTFDVNTIAHFWTTKAFLPKMLEN-NNGHIVTIA  172 (300)
T ss_pred             cCCceEEEeccccccCCCccCCCHHHHHHHHHHhhHHHHHHHHHHhHHHHhc-CCceEEEeh
Confidence            78999999999964 3332  233221   2223    46778888998865 466666654

>TIGR01724 hmd_rel H2-forming N(5),N(10)-methenyltetrahydromethanopterin dehydrogenase-related protein

Probab=95.87  E-value=0.081  Score=50.74  Aligned_cols=55  Identities=7%  Similarity=0.058  Sum_probs=37.9

Q ss_pred             HHHHHHHHHhCCCCcEEEEEecCCc---hhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcC
Q 018512           55 GQPLAMLMKINPLVSVLHLYDVVNT---PGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA  118 (354)
Q Consensus        55 G~~~a~~l~~~~~~~ei~L~D~~~~---~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~a  118 (354)
                      |+..|..|+..|+  +|+++|++..   ......+.+...    ..   ..+..++.++||+||.+-
T Consensus        32 GspMArnLlkAGh--eV~V~Drnrsa~e~e~~e~LaeaGA----~~---AaS~aEAAa~ADVVIL~L   89 (341)
T TIGR01724        32 GSRMAIEFAMAGH--DVVLAEPNREFMSDDLWKKVEDAGV----KV---VSDDKEAAKHGEIHVLFT   89 (341)
T ss_pred             HHHHHHHHHHCCC--EEEEEeCChhhhhhhhhHHHHHCCC----ee---cCCHHHHHhCCCEEEEec
Confidence            6788888888898  9999998752   122233444331    11   234578999999999984

This model represents a sister clade to the authenticated coenzyme F420-dependent N(5),N(10)-methenyltetrahydromethanopterin reductase (HMD) of TIGR01723. Two members, designated HmdII and HmdIII, are found. Members are restricted to methanogens, but the function is unknown.

>PRK08303 short chain dehydrogenase; Provisional

Probab=95.84  E-value=0.26  Score=47.04  Aligned_cols=34  Identities=18%  Similarity=0.215  Sum_probs=30.5

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecC
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVV   77 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~   77 (354)
                      .+.+.|+||++.+|..++..|+..|.  .|++.+++
T Consensus         8 ~k~~lITGgs~GIG~aia~~la~~G~--~Vv~~~r~   41 (305)
T PRK08303          8 GKVALVAGATRGAGRGIAVELGAAGA--TVYVTGRS   41 (305)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCC--EEEEEecc
Confidence            45899999999999999999999887  89999986

>PRK08017 oxidoreductase; Provisional

Probab=95.82  E-value=0.084  Score=48.20  Aligned_cols=33  Identities=24%  Similarity=0.193  Sum_probs=30.0

Q ss_pred             eEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC
Q 018512           44 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   78 (354)
Q Consensus        44 kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~   78 (354)
                      +|.|+||+|.+|.+++..|+..|.  +|++++++.
T Consensus         4 ~vlVtGasg~IG~~la~~l~~~g~--~v~~~~r~~   36 (256)
T PRK08017          4 SVLITGCSSGIGLEAALELKRRGY--RVLAACRKP   36 (256)
T ss_pred             EEEEECCCChHHHHHHHHHHHCCC--EEEEEeCCH
Confidence            799999999999999999998887  889998865

>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB

Probab=95.82  E-value=0.062  Score=49.69  Aligned_cols=35  Identities=26%  Similarity=0.376  Sum_probs=31.2

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   78 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~   78 (354)
                      ..||+|+|+ |.+|+.++..|+..|.. +++++|.+.
T Consensus        24 ~~~VlvvG~-GglGs~va~~La~~Gvg-~i~lvD~D~   58 (240)
T TIGR02355        24 ASRVLIVGL-GGLGCAASQYLAAAGVG-NLTLLDFDT   58 (240)
T ss_pred             CCcEEEECc-CHHHHHHHHHHHHcCCC-EEEEEeCCc
Confidence            458999999 99999999999998864 899999875

This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).

>PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila

Probab=95.82  E-value=0.049  Score=50.22  Aligned_cols=112  Identities=13%  Similarity=0.081  Sum_probs=58.4

Q ss_pred             EEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc--hhH--H-HHHhcCC--------CCCeEEEEeCC----------Cc
Q 018512           47 ILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGV--T-ADISHMD--------TGAVVRGFLGQ----------PQ  103 (354)
Q Consensus        47 IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~--~g~--~-~dl~~~~--------~~~~v~~~~~~----------~d  103 (354)
                      |+||+||+|+++...|+..+...+|+++-+...  .+.  . ..+.+..        ...+++.+.+.          .+
T Consensus         1 lTGaTGflG~~ll~~Ll~~~~~~~I~cLvR~~~~~~~~~rl~~~l~~~~~~~~~~~~~~~ri~~v~GDl~~~~lGL~~~~   80 (249)
T PF07993_consen    1 LTGATGFLGSHLLEELLRQPPDVKIYCLVRASSSQSALERLKDALKEYGLWDDLDKEALSRIEVVEGDLSQPNLGLSDED   80 (249)
T ss_dssp             EE-TTSHHHHHHHHHHHHHS-TTEEEEEE-SSSHHHHHHHHHGGG-SS-HHHHH-HHHTTTEEEEE--TTSGGGG--HHH
T ss_pred             CcCCCcHHHHHHHHHHHcCCCCcEEEEEEeCcccccchhhhhhhcccccchhhhhhhhhccEEEEeccccccccCCChHH
Confidence            689999999999998887765227887776541  111  1 1111110        02334443221          12


Q ss_pred             HHhhhCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 018512          104 LENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  159 (354)
Q Consensus       104 ~~~al~~aDvVIi~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~t  159 (354)
                      +.+-.+.+|+||++|+...-. ....++...|+...+++++...+.....++.+.|
T Consensus        81 ~~~L~~~v~~IiH~Aa~v~~~-~~~~~~~~~NV~gt~~ll~la~~~~~~~~~~iST  135 (249)
T PF07993_consen   81 YQELAEEVDVIIHCAASVNFN-APYSELRAVNVDGTRNLLRLAAQGKRKRFHYIST  135 (249)
T ss_dssp             HHHHHHH--EEEE--SS-SBS--S--EEHHHHHHHHHHHHHHHTSSS---EEEEEE
T ss_pred             hhccccccceeeecchhhhhc-ccchhhhhhHHHHHHHHHHHHHhccCcceEEecc
Confidence            333347899999998754221 2334466889999999999998654445445444

A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A.

>PLN02350 phosphogluconate dehydrogenase (decarboxylating)

Probab=95.81  E-value=0.038  Score=56.36  Aligned_cols=70  Identities=19%  Similarity=0.197  Sum_probs=47.3

Q ss_pred             CCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcC----CCCCeEEEEeCCCcHHhhhC---CCc
Q 018512           40 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHM----DTGAVVRGFLGQPQLENALT---GMD  112 (354)
Q Consensus        40 ~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~----~~~~~v~~~~~~~d~~~al~---~aD  112 (354)
                      ...++|.+||- |.+|+++|..|+..|.  +|+++|++..+.  .++.+.    .. ..+..   ..+++++.+   .+|
T Consensus         4 ~~~~~IG~IGL-G~MG~~mA~nL~~~G~--~V~V~NRt~~k~--~~l~~~~~~~Ga-~~~~~---a~s~~e~v~~l~~~d   74 (493)
T PLN02350          4 AALSRIGLAGL-AVMGQNLALNIAEKGF--PISVYNRTTSKV--DETVERAKKEGN-LPLYG---FKDPEDFVLSIQKPR   74 (493)
T ss_pred             CCCCCEEEEee-HHHHHHHHHHHHhCCC--eEEEECCCHHHH--HHHHHhhhhcCC-ccccc---CCCHHHHHhcCCCCC
Confidence            44568999999 9999999999999998  999999975222  222211    11 11111   234555555   499


Q ss_pred             EEEEcC
Q 018512          113 LVIIPA  118 (354)
Q Consensus       113 vVIi~a  118 (354)
                      +||++.
T Consensus        75 vIi~~v   80 (493)
T PLN02350         75 SVIILV   80 (493)
T ss_pred             EEEEEC
Confidence            999974

>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy)

Probab=95.80  E-value=0.17  Score=50.59  Aligned_cols=90  Identities=19%  Similarity=0.148  Sum_probs=59.7

Q ss_pred             CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCch-hHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcCC
Q 018512           41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP-GVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG  119 (354)
Q Consensus        41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~-g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~ag  119 (354)
                      +..+|+|+|+ |.+|..++..+...|.  +|+.+|+++.+ ..+..   ...    ...    +.+++++++|+||.+.|
T Consensus       201 ~GktVvViG~-G~IG~~va~~ak~~Ga--~ViV~d~d~~R~~~A~~---~G~----~~~----~~~e~v~~aDVVI~atG  266 (413)
T cd00401         201 AGKVAVVAGY-GDVGKGCAQSLRGQGA--RVIVTEVDPICALQAAM---EGY----EVM----TMEEAVKEGDIFVTTTG  266 (413)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCC--EEEEEECChhhHHHHHh---cCC----EEc----cHHHHHcCCCEEEECCC
Confidence            4569999999 9999999999988887  78889998732 22221   111    111    23577899999999865


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCC
Q 018512          120 VPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNP  161 (354)
Q Consensus       120 ~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNP  161 (354)
                      .+               ..+..  ..+....+.+++++++.+
T Consensus       267 ~~---------------~~i~~--~~l~~mk~GgilvnvG~~  291 (413)
T cd00401         267 NK---------------DIITG--EHFEQMKDGAIVCNIGHF  291 (413)
T ss_pred             CH---------------HHHHH--HHHhcCCCCcEEEEeCCC
Confidence            32               11211  113333478899999865

The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.

>PLN02712 arogenate dehydrogenase

Probab=95.79  E-value=0.059  Score=57.11  Aligned_cols=67  Identities=18%  Similarity=0.244  Sum_probs=46.8

Q ss_pred             CCCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhC-CCcEEEEc
Q 018512           39 GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALT-GMDLVIIP  117 (354)
Q Consensus        39 ~~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~-~aDvVIi~  117 (354)
                      +.+++||+|||. |.+|..++..|...|.  +|+.+|++.....+.   ...    +..   ..++++.+. ++|+||++
T Consensus       366 ~~~~~kIgIIGl-G~mG~slA~~L~~~G~--~V~~~dr~~~~~~a~---~~G----v~~---~~~~~el~~~~aDvVILa  432 (667)
T PLN02712        366 DGSKLKIAIVGF-GNFGQFLAKTMVKQGH--TVLAYSRSDYSDEAQ---KLG----VSY---FSDADDLCEEHPEVILLC  432 (667)
T ss_pred             CCCCCEEEEEec-CHHHHHHHHHHHHCcC--EEEEEECChHHHHHH---HcC----CeE---eCCHHHHHhcCCCEEEEC
Confidence            446689999998 9999999999988776  899999874211111   111    112   135556565 59999998


Q ss_pred             C
Q 018512          118 A  118 (354)
Q Consensus       118 a  118 (354)
                      .
T Consensus       433 v  433 (667)
T PLN02712        433 T  433 (667)
T ss_pred             C
Confidence            4

>TIGR01035 hemA glutamyl-tRNA reductase

Probab=95.78  E-value=0.05  Score=54.44  Aligned_cols=104  Identities=17%  Similarity=0.215  Sum_probs=64.6

Q ss_pred             CCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCch--hHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEc
Q 018512           40 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP--GVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIP  117 (354)
Q Consensus        40 ~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~--g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~  117 (354)
                      .+..+|+|+|+ |.+|..++..|...|. .+|+++|++..+  ..+.++.     ..  .+ ...++.+++.++|+||.+
T Consensus       178 l~~~~VlViGa-G~iG~~~a~~L~~~G~-~~V~v~~rs~~ra~~la~~~g-----~~--~i-~~~~l~~~l~~aDvVi~a  247 (417)
T TIGR01035       178 LKGKKALLIGA-GEMGELVAKHLLRKGV-GKILIANRTYERAEDLAKELG-----GE--AV-KFEDLEEYLAEADIVISS  247 (417)
T ss_pred             ccCCEEEEECC-hHHHHHHHHHHHHCCC-CEEEEEeCCHHHHHHHHHHcC-----Ce--Ee-eHHHHHHHHhhCCEEEEC
Confidence            44569999999 9999999999988773 389999997522  2222221     11  11 123567889999999998


Q ss_pred             CCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecCCCCCch
Q 018512          118 AGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNSTV  166 (354)
Q Consensus       118 ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~-p~a~viv~tNPv~~~~  166 (354)
                      .+.+... .+ .           +..+.+.... ...+++-.++|-|+-.
T Consensus       248 T~s~~~i-i~-~-----------e~l~~~~~~~~~~~~viDla~Prdid~  284 (417)
T TIGR01035       248 TGAPHPI-VS-K-----------EDVERALRERTRPLFIIDIAVPRDVDP  284 (417)
T ss_pred             CCCCCce-Ec-H-----------HHHHHHHhcCCCCeEEEEeCCCCCCCh
Confidence            6654311 11 1           1111111111 2357888899988873

This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.

>PRK08618 ornithine cyclodeaminase; Validated

Probab=95.78  E-value=0.055  Score=52.29  Aligned_cols=76  Identities=9%  Similarity=0.146  Sum_probs=50.1

Q ss_pred             CCCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc--hhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEE
Q 018512           39 GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVII  116 (354)
Q Consensus        39 ~~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~--~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi  116 (354)
                      +....+|+|||+ |..|...+..++....+.+|.++|+++.  ...+.++.+. ....+..+   .++++++.+||+||.
T Consensus       124 ~~~~~~v~iiGa-G~~a~~~~~al~~~~~~~~v~v~~r~~~~a~~~~~~~~~~-~~~~~~~~---~~~~~~~~~aDiVi~  198 (325)
T PRK08618        124 REDAKTLCLIGT-GGQAKGQLEAVLAVRDIERVRVYSRTFEKAYAFAQEIQSK-FNTEIYVV---NSADEAIEEADIIVT  198 (325)
T ss_pred             CCCCcEEEEECC-cHHHHHHHHHHHhcCCccEEEEECCCHHHHHHHHHHHHHh-cCCcEEEe---CCHHHHHhcCCEEEE
Confidence            334568999999 9999887766654434579999999862  3333344322 11223332   467889999999998


Q ss_pred             cCC
Q 018512          117 PAG  119 (354)
Q Consensus       117 ~ag  119 (354)
                      +-.
T Consensus       199 aT~  201 (325)
T PRK08618        199 VTN  201 (325)
T ss_pred             ccC
Confidence            743

>PRK06719 precorrin-2 dehydrogenase; Validated

Probab=95.77  E-value=0.12  Score=44.60  Aligned_cols=67  Identities=12%  Similarity=0.070  Sum_probs=44.3

Q ss_pred             CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcC
Q 018512           41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA  118 (354)
Q Consensus        41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~a  118 (354)
                      +..||.|+|| |.||...+..|+..|.  +|++++.+... ...++.    ...+..  ..-+ ++.++++|+||.+.
T Consensus        12 ~~~~vlVvGG-G~va~rka~~Ll~~ga--~V~VIsp~~~~-~l~~l~----~i~~~~--~~~~-~~dl~~a~lViaaT   78 (157)
T PRK06719         12 HNKVVVIIGG-GKIAYRKASGLKDTGA--FVTVVSPEICK-EMKELP----YITWKQ--KTFS-NDDIKDAHLIYAAT   78 (157)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCC--EEEEEcCccCH-HHHhcc----CcEEEe--cccC-hhcCCCceEEEECC
Confidence            3459999999 9999999999999888  88999754322 112221    111111  1112 35689999999973

>PRK08862 short chain dehydrogenase; Provisional

Probab=95.77  E-value=0.33  Score=44.09  Aligned_cols=115  Identities=13%  Similarity=0.101  Sum_probs=65.3

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCCCCeEEEE-eCCCc---HH-------hhh
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGF-LGQPQ---LE-------NAL  108 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~~~~v~~~-~~~~d---~~-------~al  108 (354)
                      .+.+.|+||++.+|..++..|+..|.  .|++++++.  .+....++....  ..+..+ .+..+   .+       +.+
T Consensus         5 ~k~~lVtGas~GIG~aia~~la~~G~--~V~~~~r~~~~l~~~~~~i~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~   80 (227)
T PRK08862          5 SSIILITSAGSVLGRTISCHFARLGA--TLILCDQDQSALKDTYEQCSALT--DNVYSFQLKDFSQESIRHLFDAIEQQF   80 (227)
T ss_pred             CeEEEEECCccHHHHHHHHHHHHCCC--EEEEEcCCHHHHHHHHHHHHhcC--CCeEEEEccCCCHHHHHHHHHHHHHHh
Confidence            35899999989999999999999998  899999876  222223333221  112111 11112   21       122


Q ss_pred             C-CCcEEEEcCCCCCCC----CCCHHHH---HHHHH----HHHHHHHHHHhhhCCCeEEEEecC
Q 018512          109 T-GMDLVIIPAGVPRKP----GMTRDDL---FNINA----GIVRTLCEGIAKCCPNATVNLISN  160 (354)
Q Consensus       109 ~-~aDvVIi~ag~~~~~----g~~r~d~---~~~n~----~~~~~i~~~i~~~~p~a~viv~tN  160 (354)
                      . ..|++|..+|.....    ..+..++   +..|.    ...+...+.+++....+.|+++|.
T Consensus        81 g~~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~g~Iv~isS  144 (227)
T PRK08862         81 NRAPDVLVNNWTSSPLPSLFDEQPSESFIQQLSSLASTLFTYGQVAAERMRKRNKKGVIVNVIS  144 (227)
T ss_pred             CCCCCEEEECCccCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCceEEEEec
Confidence            3 689999998743221    1222222   22232    344555666665544566776664

>TIGR00936 ahcY adenosylhomocysteinase

Probab=95.77  E-value=0.17  Score=50.30  Aligned_cols=92  Identities=23%  Similarity=0.185  Sum_probs=58.7

Q ss_pred             CCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcCC
Q 018512           40 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG  119 (354)
Q Consensus        40 ~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~ag  119 (354)
                      ....+|+|+|. |.+|..++..+...|.  +|+.+|.++.+.... ..+ .+    ..    .+.+++++++|+||.+.|
T Consensus       193 l~Gk~VvViG~-G~IG~~vA~~ak~~Ga--~ViV~d~dp~r~~~A-~~~-G~----~v----~~leeal~~aDVVItaTG  259 (406)
T TIGR00936       193 IAGKTVVVAGY-GWCGKGIAMRARGMGA--RVIVTEVDPIRALEA-AMD-GF----RV----MTMEEAAKIGDIFITATG  259 (406)
T ss_pred             CCcCEEEEECC-CHHHHHHHHHHhhCcC--EEEEEeCChhhHHHH-Hhc-CC----Ee----CCHHHHHhcCCEEEECCC
Confidence            34569999999 9999999999987776  899999887321111 111 11    11    124678899999998754


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCC
Q 018512          120 VPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNP  161 (354)
Q Consensus       120 ~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNP  161 (354)
                      .+               .++..  +.+....+.+++++++-+
T Consensus       260 ~~---------------~vI~~--~~~~~mK~GailiN~G~~  284 (406)
T TIGR00936       260 NK---------------DVIRG--EHFENMKDGAIVANIGHF  284 (406)
T ss_pred             CH---------------HHHHH--HHHhcCCCCcEEEEECCC
Confidence            22               12221  122223367888888754

This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).

>PRK07340 ornithine cyclodeaminase; Validated

Probab=95.76  E-value=0.051  Score=52.04  Aligned_cols=74  Identities=14%  Similarity=0.113  Sum_probs=51.1

Q ss_pred             CCCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEE
Q 018512           39 GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVII  116 (354)
Q Consensus        39 ~~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi  116 (354)
                      +....+|+|+|+ |..|...+..+.......+|.++|++.  ++..+.++...  ...+.    ..+.++++.+||+||.
T Consensus       122 ~~~~~~v~IiGa-G~qa~~~~~al~~~~~~~~v~v~~r~~~~a~~~a~~~~~~--~~~~~----~~~~~~av~~aDiVit  194 (304)
T PRK07340        122 PAPPGDLLLIGT-GVQARAHLEAFAAGLPVRRVWVRGRTAASAAAFCAHARAL--GPTAE----PLDGEAIPEAVDLVVT  194 (304)
T ss_pred             CCCCCEEEEECC-cHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHhc--CCeeE----ECCHHHHhhcCCEEEE
Confidence            445569999999 999999988886533336899999986  33344444432  12222    1356789999999999


Q ss_pred             cCC
Q 018512          117 PAG  119 (354)
Q Consensus       117 ~ag  119 (354)
                      +..
T Consensus       195 aT~  197 (304)
T PRK07340        195 ATT  197 (304)
T ss_pred             ccC
Confidence            743

>TIGR01850 argC N-acetyl-gamma-glutamyl-phosphate reductase, common form

Probab=95.75  E-value=0.061  Score=52.48  Aligned_cols=74  Identities=24%  Similarity=0.265  Sum_probs=43.8

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEE-EEecCCchhHHH-H-HhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcCC
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLH-LYDVVNTPGVTA-D-ISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG  119 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~-L~D~~~~~g~~~-d-l~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~ag  119 (354)
                      |||+|+||+|.+|..++..|...+.. +++ +++.+...+... + ..+......+.. . ..+.++.++++|+||++.+
T Consensus         1 ~kVaIiGATG~vG~ellr~L~~hP~~-el~~l~~s~~sagk~~~~~~~~l~~~~~~~~-~-~~~~~~~~~~~DvVf~alP   77 (346)
T TIGR01850         1 IKVAIVGASGYTGGELLRLLLNHPEV-EITYLVSSRESAGKPVSEVHPHLRGLVDLNL-E-PIDEEEIAEDADVVFLALP   77 (346)
T ss_pred             CEEEEECCCCHHHHHHHHHHHcCCCc-eEEEEeccchhcCCChHHhCccccccCCcee-e-cCCHHHhhcCCCEEEECCC
Confidence            58999999999999999998866543 666 667654222211 1 111111011111 1 1234444469999999853

This model represents the more common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and the gap architecture in a multiple sequence alignment. Bacterial members of this family tend to be found within Arg biosynthesis operons.

>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional

Probab=95.73  E-value=0.22  Score=45.99  Aligned_cols=35  Identities=17%  Similarity=0.098  Sum_probs=29.7

Q ss_pred             CCeEEEEcCC--CchHHHHHHHHHhCCCCcEEEEEecCC
Q 018512           42 GFKVAILGAA--GGIGQPLAMLMKINPLVSVLHLYDVVN   78 (354)
Q Consensus        42 ~~kI~IiGa~--G~vG~~~a~~l~~~~~~~ei~L~D~~~   78 (354)
                      .+.+.|+||+  +.+|..++..|+..|.  .|++.|++.
T Consensus        10 ~k~~lItGas~g~GIG~a~a~~la~~G~--~v~l~~r~~   46 (258)
T PRK07533         10 GKRGLVVGIANEQSIAWGCARAFRALGA--ELAVTYLND   46 (258)
T ss_pred             CCEEEEECCCCCCcHHHHHHHHHHHcCC--EEEEEeCCh
Confidence            3578999996  3799999999999887  899999875

>PRK08223 hypothetical protein; Validated

Probab=95.72  E-value=0.053  Score=51.37  Aligned_cols=36  Identities=22%  Similarity=0.248  Sum_probs=32.0

Q ss_pred             CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC
Q 018512           41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   78 (354)
Q Consensus        41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~   78 (354)
                      +..||+|+|+ |-+|+.++..|+..|.. +|.|+|-|.
T Consensus        26 ~~s~VlIvG~-GGLGs~va~~LA~aGVG-~i~lvD~D~   61 (287)
T PRK08223         26 RNSRVAIAGL-GGVGGIHLLTLARLGIG-KFTIADFDV   61 (287)
T ss_pred             hcCCEEEECC-CHHHHHHHHHHHHhCCC-eEEEEeCCC
Confidence            4458999999 99999999999999975 899999885

>TIGR00465 ilvC ketol-acid reductoisomerase

Probab=95.71  E-value=0.075  Score=51.16  Aligned_cols=65  Identities=20%  Similarity=0.201  Sum_probs=44.0

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcC
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA  118 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~a  118 (354)
                      .+||+|||+ |++|.+++..|...+.  +++..+....... ..+....    +..   . +..+++++||+|+++.
T Consensus         3 ~kkIgiIG~-G~mG~AiA~~L~~sG~--~Viv~~~~~~~~~-~~a~~~G----v~~---~-s~~ea~~~ADiVvLaV   67 (314)
T TIGR00465         3 GKTVAIIGY-GSQGHAQALNLRDSGL--NVIVGLRKGGASW-KKATEDG----FKV---G-TVEEAIPQADLIMNLL   67 (314)
T ss_pred             cCEEEEEeE-cHHHHHHHHHHHHCCC--eEEEEECcChhhH-HHHHHCC----CEE---C-CHHHHHhcCCEEEEeC
Confidence            469999999 9999999999998887  6666555431111 1122111    121   1 3567889999999985

This is the second enzyme in the parallel isoleucine-valine biosynthetic pathway

>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain

Probab=95.70  E-value=0.097  Score=47.20  Aligned_cols=70  Identities=17%  Similarity=0.125  Sum_probs=47.7

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcCC
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG  119 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~ag  119 (354)
                      ..||+|+|| |.+|..-+..|+..|.  .|++++.+... ...++....   .+.......+ .+.+.++|+||.+.+
T Consensus         9 gk~vlVvGg-G~va~rk~~~Ll~~ga--~VtVvsp~~~~-~l~~l~~~~---~i~~~~~~~~-~~dl~~~~lVi~at~   78 (205)
T TIGR01470         9 GRAVLVVGG-GDVALRKARLLLKAGA--QLRVIAEELES-ELTLLAEQG---GITWLARCFD-ADILEGAFLVIAATD   78 (205)
T ss_pred             CCeEEEECc-CHHHHHHHHHHHHCCC--EEEEEcCCCCH-HHHHHHHcC---CEEEEeCCCC-HHHhCCcEEEEECCC
Confidence            349999999 9999999999998887  89999976432 222343322   2333222223 356899999998743

This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.

>PRK07041 short chain dehydrogenase; Provisional

Probab=95.70  E-value=0.07  Score=47.95  Aligned_cols=110  Identities=12%  Similarity=0.179  Sum_probs=61.2

Q ss_pred             EEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc--hhHHHHHhcCCCCCe-EEE-EeCCCcHHhhhC---CCcEEEEcC
Q 018512           46 AILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAV-VRG-FLGQPQLENALT---GMDLVIIPA  118 (354)
Q Consensus        46 ~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~--~g~~~dl~~~~~~~~-v~~-~~~~~d~~~al~---~aDvVIi~a  118 (354)
                      .|+||+|.+|..++..|+..|.  +|++++++..  .....++.. ..... +.. .....++.++++   ..|++|+.+
T Consensus         1 lItGas~~iG~~~a~~l~~~G~--~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~id~li~~a   77 (230)
T PRK07041          1 LVVGGSSGIGLALARAFAAEGA--RVTIASRSRDRLAAAARALGG-GAPVRTAALDITDEAAVDAFFAEAGPFDHVVITA   77 (230)
T ss_pred             CeecCCChHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHhc-CCceEEEEccCCCHHHHHHHHHhcCCCCEEEECC
Confidence            3899999999999999999887  8999998752  222222321 11111 111 111122333333   479999998


Q ss_pred             CCCCCC---CCC---HHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 018512          119 GVPRKP---GMT---RDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  159 (354)
Q Consensus       119 g~~~~~---g~~---r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~t  159 (354)
                      |.....   ..+   ....+..|+.....+.+. ......+.|++++
T Consensus        78 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~-~~~~~~g~iv~~s  123 (230)
T PRK07041         78 ADTPGGPVRALPLAAAQAAMDSKFWGAYRVARA-ARIAPGGSLTFVS  123 (230)
T ss_pred             CCCCCCChhhCCHHHHHHHHHHHHHHHHHHHhh-hhhcCCeEEEEEC
Confidence            864321   111   233455666666666662 2233445555554

>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional

Probab=95.70  E-value=0.31  Score=45.07  Aligned_cols=155  Identities=13%  Similarity=0.126  Sum_probs=80.2

Q ss_pred             CCeEEEEcCCC--chHHHHHHHHHhCCCCcEEEEEecCC-chhHHHHHhcC-CCCCeEEE-EeCCCcH-------HhhhC
Q 018512           42 GFKVAILGAAG--GIGQPLAMLMKINPLVSVLHLYDVVN-TPGVTADISHM-DTGAVVRG-FLGQPQL-------ENALT  109 (354)
Q Consensus        42 ~~kI~IiGa~G--~vG~~~a~~l~~~~~~~ei~L~D~~~-~~g~~~dl~~~-~~~~~v~~-~~~~~d~-------~~al~  109 (354)
                      .+.+.|+||++  -+|..++..|+..|.  .|++.+++. ......++... .....+.. +....+.       .+.+.
T Consensus         8 ~k~~lITGas~~~GIG~a~a~~la~~G~--~v~~~~r~~~~~~~~~~l~~~~g~~~~~~~Dv~~~~~v~~~~~~~~~~~g   85 (260)
T PRK06603          8 GKKGLITGIANNMSISWAIAQLAKKHGA--ELWFTYQSEVLEKRVKPLAEEIGCNFVSELDVTNPKSISNLFDDIKEKWG   85 (260)
T ss_pred             CcEEEEECCCCCcchHHHHHHHHHHcCC--EEEEEeCchHHHHHHHHHHHhcCCceEEEccCCCHHHHHHHHHHHHHHcC
Confidence            34789999965  599999999998887  788888764 12223333321 11111111 1111111       12245


Q ss_pred             CCcEEEEcCCCCCC-----C--CCCH---HHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecCCCCCchHHHHHHHHHhCC
Q 018512          110 GMDLVIIPAGVPRK-----P--GMTR---DDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNSTVPIAAEVFKKAGT  178 (354)
Q Consensus       110 ~aDvVIi~ag~~~~-----~--g~~r---~d~~~~n~~~~~~i~~~i~~~~-p~a~viv~tNPv~~~~~~~~~~~~~~~~  178 (354)
                      ..|++|..+|....     +  ..+.   ...+.-|+.....+.+.+...- .++.|++++......            +
T Consensus        86 ~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~m~~~G~Iv~isS~~~~~------------~  153 (260)
T PRK06603         86 SFDFLLHGMAFADKNELKGRYVDTSLENFHNSLHISCYSLLELSRSAEALMHDGGSIVTLTYYGAEK------------V  153 (260)
T ss_pred             CccEEEEccccCCcccccCccccCCHHHHHHHHHHHHHHHHHHHHHHHhhhccCceEEEEecCcccc------------C
Confidence            68999998886421     1  1122   2234445544444444332221 346777776433211            2


Q ss_pred             CCCCCEEEeccchHHHHHHHHHHHhCCCCCCCcc
Q 018512          179 YDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDV  212 (354)
Q Consensus       179 ~p~~kviG~t~ld~~r~~~~la~~l~v~~~~v~~  212 (354)
                      .|..-.++.+.-.-..|.+.+|..++  +..|++
T Consensus       154 ~~~~~~Y~asKaal~~l~~~la~el~--~~gIrV  185 (260)
T PRK06603        154 IPNYNVMGVAKAALEASVKYLANDMG--ENNIRV  185 (260)
T ss_pred             CCcccchhhHHHHHHHHHHHHHHHhh--hcCeEE
Confidence            23223455555445567777887764  344443

>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional

Probab=95.66  E-value=0.11  Score=48.23  Aligned_cols=36  Identities=22%  Similarity=0.368  Sum_probs=31.5

Q ss_pred             CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC
Q 018512           41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   78 (354)
Q Consensus        41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~   78 (354)
                      +..||+|+|+ |.+|+.++..|+..|.. ++.++|.+.
T Consensus        31 ~~~~VliiG~-GglGs~va~~La~~Gvg-~i~lvD~D~   66 (245)
T PRK05690         31 KAARVLVVGL-GGLGCAASQYLAAAGVG-TLTLVDFDT   66 (245)
T ss_pred             cCCeEEEECC-CHHHHHHHHHHHHcCCC-EEEEEcCCE
Confidence            3458999999 99999999999998864 899999875

>PRK06141 ornithine cyclodeaminase; Validated

Probab=95.64  E-value=0.072  Score=51.23  Aligned_cols=74  Identities=12%  Similarity=0.191  Sum_probs=49.4

Q ss_pred             CCCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEE
Q 018512           39 GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVII  116 (354)
Q Consensus        39 ~~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi  116 (354)
                      +....+|+|||+ |.+|...+..+.......+|.++|+++  .+..+.++.+..  ..+...   .+.++++++||+|+.
T Consensus       122 ~~~~~~v~iiG~-G~~a~~~~~al~~~~~~~~V~V~~Rs~~~a~~~a~~~~~~g--~~~~~~---~~~~~av~~aDIVi~  195 (314)
T PRK06141        122 RKDASRLLVVGT-GRLASLLALAHASVRPIKQVRVWGRDPAKAEALAAELRAQG--FDAEVV---TDLEAAVRQADIISC  195 (314)
T ss_pred             CCCCceEEEECC-cHHHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHhcC--CceEEe---CCHHHHHhcCCEEEE
Confidence            444569999998 999999987665532345999999976  333444444321  123332   356788999999976


Q ss_pred             cC
Q 018512          117 PA  118 (354)
Q Consensus       117 ~a  118 (354)
                      +.
T Consensus       196 aT  197 (314)
T PRK06141        196 AT  197 (314)
T ss_pred             ee
Confidence            54

>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional

Probab=95.63  E-value=0.51  Score=44.16  Aligned_cols=34  Identities=21%  Similarity=0.037  Sum_probs=29.5

Q ss_pred             CeEEEEcCC--CchHHHHHHHHHhCCCCcEEEEEecCC
Q 018512           43 FKVAILGAA--GGIGQPLAMLMKINPLVSVLHLYDVVN   78 (354)
Q Consensus        43 ~kI~IiGa~--G~vG~~~a~~l~~~~~~~ei~L~D~~~   78 (354)
                      +.+.|+||+  +-+|..++..|+..|.  .|++.|++.
T Consensus         6 k~~lItGas~~~GIG~aiA~~la~~G~--~Vil~~r~~   41 (274)
T PRK08415          6 KKGLIVGVANNKSIAYGIAKACFEQGA--ELAFTYLNE   41 (274)
T ss_pred             cEEEEECCCCCCCHHHHHHHHHHHCCC--EEEEEecCH
Confidence            478999995  5799999999999987  899999874

>cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like

Probab=95.61  E-value=0.097  Score=46.91  Aligned_cols=35  Identities=26%  Similarity=0.370  Sum_probs=30.9

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   78 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~   78 (354)
                      ..||+|+|+ |.+|+.++..|+..|.. ++.++|.+.
T Consensus        19 ~s~VlviG~-gglGsevak~L~~~GVg-~i~lvD~d~   53 (198)
T cd01485          19 SAKVLIIGA-GALGAEIAKNLVLAGID-SITIVDHRL   53 (198)
T ss_pred             hCcEEEECC-CHHHHHHHHHHHHcCCC-EEEEEECCc
Confidence            458999999 88999999999999974 899999874

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol

>TIGR01692 HIBADH 3-hydroxyisobutyrate dehydrogenase

Probab=95.56  E-value=0.046  Score=51.75  Aligned_cols=60  Identities=18%  Similarity=0.307  Sum_probs=43.7

Q ss_pred             EEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcC
Q 018512           47 ILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA  118 (354)
Q Consensus        47 IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~a  118 (354)
                      |||. |.+|..++..|+..|+  +|.++|+++..  ..++....    ...   +.+..++++++|+||++.
T Consensus         1 ~IGl-G~mG~~mA~~L~~~G~--~V~v~dr~~~~--~~~l~~~g----~~~---~~s~~~~~~~advVil~v   60 (288)
T TIGR01692         1 FIGL-GNMGGPMAANLLKAGH--PVRVFDLFPDA--VEEAVAAG----AQA---AASPAEAAEGADRVITML   60 (288)
T ss_pred             CCcc-cHhHHHHHHHHHhCCC--eEEEEeCCHHH--HHHHHHcC----Cee---cCCHHHHHhcCCEEEEeC
Confidence            5798 9999999999999887  89999987622  22233221    111   235678899999999985

This enzyme belongs to the 3-hydroxyacid dehydrogenase family, sharing a common evolutionary origin and enzymatic mechanism with 6-phosphogluconate. HIBADH exhibits sequence similarity to the NAD binding domain of 6-phosphogluconate dehydrogenase above trusted (pfam03446).

>PTZ00075 Adenosylhomocysteinase; Provisional

Probab=95.56  E-value=0.11  Score=52.65  Aligned_cols=91  Identities=20%  Similarity=0.208  Sum_probs=61.1

Q ss_pred             CCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchh-HHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcC
Q 018512           40 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPG-VTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA  118 (354)
Q Consensus        40 ~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g-~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~a  118 (354)
                      ....+|+|+|. |.+|..+|..+...|.  +|+.+|+++... .+.  .+ ..    ..    .+++++++.||+||.+.
T Consensus       252 LaGKtVgVIG~-G~IGr~vA~rL~a~Ga--~ViV~e~dp~~a~~A~--~~-G~----~~----~~leell~~ADIVI~at  317 (476)
T PTZ00075        252 IAGKTVVVCGY-GDVGKGCAQALRGFGA--RVVVTEIDPICALQAA--ME-GY----QV----VTLEDVVETADIFVTAT  317 (476)
T ss_pred             cCCCEEEEECC-CHHHHHHHHHHHHCCC--EEEEEeCCchhHHHHH--hc-Cc----ee----ccHHHHHhcCCEEEECC
Confidence            34569999999 9999999999987777  899998876322 111  11 11    11    24678899999999986


Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCC
Q 018512          119 GVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNP  161 (354)
Q Consensus       119 g~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNP  161 (354)
                      |.+.               ++.  .+.+....|.+++++++-.
T Consensus       318 Gt~~---------------iI~--~e~~~~MKpGAiLINvGr~  343 (476)
T PTZ00075        318 GNKD---------------IIT--LEHMRRMKNNAIVGNIGHF  343 (476)
T ss_pred             Cccc---------------ccC--HHHHhccCCCcEEEEcCCC
Confidence            5321               111  1233444588999998754

>TIGR02992 ectoine_eutC ectoine utilization protein EutC

Probab=95.56  E-value=0.083  Score=51.08  Aligned_cols=76  Identities=16%  Similarity=0.217  Sum_probs=51.5

Q ss_pred             CCCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEE
Q 018512           39 GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVII  116 (354)
Q Consensus        39 ~~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi  116 (354)
                      +....+++|||+ |..|...+..|.....+.+|.+++++.  ++..+.++.+.. ...+..   ..++++++.+||+||.
T Consensus       126 ~~~~~~v~iiGa-G~qA~~~~~al~~~~~i~~v~V~~R~~~~a~~~a~~~~~~~-g~~v~~---~~~~~~av~~aDiVvt  200 (326)
T TIGR02992       126 REDSSVVAIFGA-GMQARLQLEALTLVRDIRSARIWARDSAKAEALALQLSSLL-GIDVTA---ATDPRAAMSGADIIVT  200 (326)
T ss_pred             CCCCcEEEEECC-CHHHHHHHHHHHHhCCccEEEEECCCHHHHHHHHHHHHhhc-CceEEE---eCCHHHHhccCCEEEE
Confidence            334569999999 999998888776433356899999986  333444443221 122322   2467889999999999


Q ss_pred             cCC
Q 018512          117 PAG  119 (354)
Q Consensus       117 ~ag  119 (354)
                      +..
T Consensus       201 aT~  203 (326)
T TIGR02992       201 TTP  203 (326)
T ss_pred             ecC
Confidence            743

Members of this protein family are EutA, a predicted arylmalonate decarboxylase found in a conserved ectoine utilization operon of species that include Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti, Silicibacter pomeroyi, Agrobacterium tumefaciens, and Pseudomonas putida. This family belongs to the ornithine cyclodeaminase/mu-crystallin family (pfam02423).

>TIGR01500 sepiapter_red sepiapterin reductase

Probab=95.55  E-value=0.24  Score=45.46  Aligned_cols=33  Identities=24%  Similarity=0.265  Sum_probs=28.2

Q ss_pred             eEEEEcCCCchHHHHHHHHHh----CCCCcEEEEEecCC
Q 018512           44 KVAILGAAGGIGQPLAMLMKI----NPLVSVLHLYDVVN   78 (354)
Q Consensus        44 kI~IiGa~G~vG~~~a~~l~~----~~~~~ei~L~D~~~   78 (354)
                      .+.|+||+|.+|..++..|+.    .|.  .|++.+++.
T Consensus         2 ~vlItGas~GIG~~~a~~la~~~~~~g~--~V~~~~r~~   38 (256)
T TIGR01500         2 VCLVTGASRGFGRTIAQELAKCLKSPGS--VLVLSARND   38 (256)
T ss_pred             EEEEecCCCchHHHHHHHHHHhhccCCc--EEEEEEcCH
Confidence            478999999999999999986    455  899999876

This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.

>PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional

Probab=95.52  E-value=0.089  Score=55.18  Aligned_cols=137  Identities=16%  Similarity=0.197  Sum_probs=81.7

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcH----HhhhCCCcEEEEc
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQL----ENALTGMDLVIIP  117 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~----~~al~~aDvVIi~  117 (354)
                      ..+|.|+|. |.+|+.++..|...++  +++++|.|+..  +..+.+.. .+-+.+  +.++.    +..+++||.||++
T Consensus       400 ~~~vII~G~-Gr~G~~va~~L~~~g~--~vvvID~d~~~--v~~~~~~g-~~v~~G--Dat~~~~L~~agi~~A~~vv~~  471 (601)
T PRK03659        400 KPQVIIVGF-GRFGQVIGRLLMANKM--RITVLERDISA--VNLMRKYG-YKVYYG--DATQLELLRAAGAEKAEAIVIT  471 (601)
T ss_pred             cCCEEEecC-chHHHHHHHHHHhCCC--CEEEEECCHHH--HHHHHhCC-CeEEEe--eCCCHHHHHhcCCccCCEEEEE
Confidence            468999999 9999999999998888  89999998621  22233322 122222  12232    1336799999998


Q ss_pred             CCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEe-cCCCCCchHHHHHHHHHhCCCCCCCEEEeccchHHHHH
Q 018512          118 AGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLI-SNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRAN  196 (354)
Q Consensus       118 ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~-tNPv~~~~~~~~~~~~~~~~~p~~kviG~t~ld~~r~~  196 (354)
                      -+.+           ..|.    .++..++++.|+..++.- .||.+.-      .+++. |  .+.++-=+...+.++-
T Consensus       472 ~~d~-----------~~n~----~i~~~~r~~~p~~~IiaRa~~~~~~~------~L~~~-G--a~~vv~e~~es~l~l~  527 (601)
T PRK03659        472 CNEP-----------EDTM----KIVELCQQHFPHLHILARARGRVEAH------ELLQA-G--VTQFSRETFSSALELG  527 (601)
T ss_pred             eCCH-----------HHHH----HHHHHHHHHCCCCeEEEEeCCHHHHH------HHHhC-C--CCEEEccHHHHHHHHH
Confidence            3211           3333    355667788899766654 4654332      23443 3  2345433443344554


Q ss_pred             HHHHHHhCCCCCCC
Q 018512          197 TFVAEVLGLDPRDV  210 (354)
Q Consensus       197 ~~la~~l~v~~~~v  210 (354)
                      ...=..+|++++++
T Consensus       528 ~~~L~~lg~~~~~~  541 (601)
T PRK03659        528 RKTLVSLGMHPHQA  541 (601)
T ss_pred             HHHHHHcCCCHHHH
Confidence            44556677776554

>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional

Probab=95.46  E-value=0.23  Score=44.91  Aligned_cols=32  Identities=19%  Similarity=0.325  Sum_probs=26.9

Q ss_pred             eEEEEcCCCchHHHHHHHHHhCCCCcEEEEE-ecC
Q 018512           44 KVAILGAAGGIGQPLAMLMKINPLVSVLHLY-DVV   77 (354)
Q Consensus        44 kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~-D~~   77 (354)
                      .+.|+||+|++|+.++..|+..|.  +|++. +.+
T Consensus         3 ~~lItGa~g~iG~~l~~~l~~~g~--~v~~~~~~~   35 (247)
T PRK09730          3 IALVTGGSRGIGRATALLLAQEGY--TVAVNYQQN   35 (247)
T ss_pred             EEEEeCCCchHHHHHHHHHHHCCC--EEEEEeCCC
Confidence            689999999999999999998887  77664 443

>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=95.46  E-value=0.11  Score=52.20  Aligned_cols=123  Identities=24%  Similarity=0.320  Sum_probs=70.5

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhH---HHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcC
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGV---TADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA  118 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~---~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~a  118 (354)
                      .++|.|+|+ |.+|..+|..|+..|.  +|+++|.+.....   ..++....    ++.+.... ..+...++|+||.++
T Consensus         5 ~k~v~iiG~-g~~G~~~A~~l~~~G~--~V~~~d~~~~~~~~~~~~~l~~~~----~~~~~~~~-~~~~~~~~d~vv~~~   76 (450)
T PRK14106          5 GKKVLVVGA-GVSGLALAKFLKKLGA--KVILTDEKEEDQLKEALEELGELG----IELVLGEY-PEEFLEGVDLVVVSP   76 (450)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCC--EEEEEeCCchHHHHHHHHHHHhcC----CEEEeCCc-chhHhhcCCEEEECC
Confidence            468999999 7899999999999998  9999999752211   22332221    22221111 124467899999998


Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCC--CchHHHHHHHHH
Q 018512          119 GVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVN--STVPIAAEVFKK  175 (354)
Q Consensus       119 g~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv~--~~~~~~~~~~~~  175 (354)
                      |.+.... .....-..+++++...+...+.. + ..+|-+|=..+  ..+.+++..+..
T Consensus        77 g~~~~~~-~~~~a~~~~i~~~~~~~~~~~~~-~-~~vI~ITGS~GKTTt~~~l~~iL~~  132 (450)
T PRK14106         77 GVPLDSP-PVVQAHKKGIEVIGEVELAYRFS-K-APIVAITGTNGKTTTTTLLGEIFKN  132 (450)
T ss_pred             CCCCCCH-HHHHHHHCCCcEEeHHHHHHhhc-C-CCEEEEeCCCchHHHHHHHHHHHHH
Confidence            8653211 11122234566665555443322 2 34555654443  444555555543

>PRK14874 aspartate-semialdehyde dehydrogenase; Provisional

Probab=95.46  E-value=0.044  Score=53.14  Aligned_cols=71  Identities=21%  Similarity=0.440  Sum_probs=45.6

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCC-CcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcCC
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPL-VSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG  119 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~-~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~ag  119 (354)
                      ++||+|+||+|++|..++.+|...++ ..+|..+-.+...+...++..    ..+... .. + ..+++++|+||++.|
T Consensus         1 ~~~V~IvGAtG~vG~~l~~lL~~~~hp~~~l~~l~s~~~~g~~l~~~g----~~i~v~-d~-~-~~~~~~vDvVf~A~g   72 (334)
T PRK14874          1 GYNVAVVGATGAVGREMLNILEERNFPVDKLRLLASARSAGKELSFKG----KELKVE-DL-T-TFDFSGVDIALFSAG   72 (334)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCCcceEEEEEccccCCCeeeeCC----ceeEEe-eC-C-HHHHcCCCEEEECCC
Confidence            46999999999999999999988654 347777755442222222211    223322 11 2 245689999999864

>PLN02968 Probable N-acetyl-gamma-glutamyl-phosphate reductase

Probab=95.45  E-value=0.033  Score=55.01  Aligned_cols=75  Identities=15%  Similarity=0.202  Sum_probs=45.6

Q ss_pred             CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhc--CCCCCeEEEEeCCCcHHhhhCCCcEEEEcC
Q 018512           41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISH--MDTGAVVRGFLGQPQLENALTGMDLVIIPA  118 (354)
Q Consensus        41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~--~~~~~~v~~~~~~~d~~~al~~aDvVIi~a  118 (354)
                      .++||+|+||+|.+|..+...|...+.. +|.++..+...|......+  ... ..+..+. ..+ .+.++++|+||++.
T Consensus        37 ~~~kVaIvGATG~vG~eLlrlL~~hP~~-el~~l~s~~saG~~i~~~~~~l~~-~~~~~~~-~~~-~~~~~~~DvVf~Al  112 (381)
T PLN02968         37 EKKRIFVLGASGYTGAEVRRLLANHPDF-EITVMTADRKAGQSFGSVFPHLIT-QDLPNLV-AVK-DADFSDVDAVFCCL  112 (381)
T ss_pred             cccEEEEECCCChHHHHHHHHHHhCCCC-eEEEEEChhhcCCCchhhCccccC-cccccee-cCC-HHHhcCCCEEEEcC
Confidence            5579999999999999999998887543 8888876542222111111  110 1111111 112 23479999999975


Q ss_pred             C
Q 018512          119 G  119 (354)
Q Consensus       119 g  119 (354)
                      +
T Consensus       113 p  113 (381)
T PLN02968        113 P  113 (381)
T ss_pred             C
Confidence            3

>PRK06407 ornithine cyclodeaminase; Provisional

Probab=95.44  E-value=0.072  Score=50.93  Aligned_cols=72  Identities=17%  Similarity=0.074  Sum_probs=51.0

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcC
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA  118 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~a  118 (354)
                      ..+++|||+ |..|..-+..+..-..+.+|.++|++.  +...+.++.+.. ...+...   .+.++++++||+|+.+.
T Consensus       117 a~~l~iiGa-G~QA~~~~~a~~~v~~i~~v~v~~r~~~~a~~f~~~~~~~~-~~~v~~~---~~~~eav~~aDIV~taT  190 (301)
T PRK06407        117 VENFTIIGS-GFQAETQLEGMASVYNPKRIRVYSRNFDHARAFAERFSKEF-GVDIRPV---DNAEAALRDADTITSIT  190 (301)
T ss_pred             CcEEEEECC-cHHHHHHHHHHHhcCCCCEEEEECCCHHHHHHHHHHHHHhc-CCcEEEe---CCHHHHHhcCCEEEEec
Confidence            458999999 999888777666555567999999987  344445555421 2234432   45789999999999863

>TIGR01745 asd_gamma aspartate-semialdehyde dehydrogenase, gamma-proteobacterial

Probab=95.43  E-value=0.042  Score=53.79  Aligned_cols=71  Identities=17%  Similarity=0.237  Sum_probs=45.9

Q ss_pred             CeEEEEcCCCchHHHHHHHHH-hCCC-CcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcCC
Q 018512           43 FKVAILGAAGGIGQPLAMLMK-INPL-VSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG  119 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~-~~~~-~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~ag  119 (354)
                      +||+|+||+|.||+.+...|. .+.. ..+++++......|.......  ....+..   ..+ .+++.+.|+|++++|
T Consensus         1 ~~VavvGATG~VG~~ll~~L~~e~~fp~~~~~~~ss~~s~g~~~~f~~--~~~~v~~---~~~-~~~~~~vDivffa~g   73 (366)
T TIGR01745         1 KNVGLVGWRGMVGSVLMQRMQEERDFDAIRPVFFSTSQLGQAAPSFGG--TTGTLQD---AFD-IDALKALDIIITCQG   73 (366)
T ss_pred             CeEEEEcCcCHHHHHHHHHHHhCCCCccccEEEEEchhhCCCcCCCCC--CcceEEc---Ccc-cccccCCCEEEEcCC
Confidence            489999999999999999888 4453 368888887542222111111  1112222   122 246899999999876

>PRK00045 hemA glutamyl-tRNA reductase; Reviewed

Probab=95.43  E-value=0.096  Score=52.49  Aligned_cols=105  Identities=18%  Similarity=0.273  Sum_probs=64.7

Q ss_pred             CCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCch--hHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEc
Q 018512           40 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP--GVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIP  117 (354)
Q Consensus        40 ~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~--g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~  117 (354)
                      .+..+|+|+|+ |.+|..++..|...|. .+|+++|++..+  ..+.++.     ..+..   ..++.+++.++|+||.+
T Consensus       180 ~~~~~vlViGa-G~iG~~~a~~L~~~G~-~~V~v~~r~~~ra~~la~~~g-----~~~~~---~~~~~~~l~~aDvVI~a  249 (423)
T PRK00045        180 LSGKKVLVIGA-GEMGELVAKHLAEKGV-RKITVANRTLERAEELAEEFG-----GEAIP---LDELPEALAEADIVISS  249 (423)
T ss_pred             ccCCEEEEECc-hHHHHHHHHHHHHCCC-CeEEEEeCCHHHHHHHHHHcC-----CcEee---HHHHHHHhccCCEEEEC
Confidence            45579999999 9999999998887664 378999987522  2222221     11111   13566788999999998


Q ss_pred             CCCCCCCCCCHHHHHHHHHHHHHHHHHHHh-hhCCCeEEEEecCCCCCch
Q 018512          118 AGVPRKPGMTRDDLFNINAGIVRTLCEGIA-KCCPNATVNLISNPVNSTV  166 (354)
Q Consensus       118 ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~-~~~p~a~viv~tNPv~~~~  166 (354)
                      .+.+... .+.        ..++..   +. +.....+++=.++|-|+-.
T Consensus       250 T~s~~~~-i~~--------~~l~~~---~~~~~~~~~vviDla~Prdid~  287 (423)
T PRK00045        250 TGAPHPI-IGK--------GMVERA---LKARRHRPLLLVDLAVPRDIEP  287 (423)
T ss_pred             CCCCCcE-EcH--------HHHHHH---HhhccCCCeEEEEeCCCCCCcc
Confidence            6654311 111        111111   11 1124567888899988874

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=95.41  E-value=0.089  Score=52.76  Aligned_cols=71  Identities=23%  Similarity=0.201  Sum_probs=45.7

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEE-EeCCCcHHhh-hCCCcEEEEcC
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRG-FLGQPQLENA-LTGMDLVIIPA  118 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~-~~~~~d~~~a-l~~aDvVIi~a  118 (354)
                      |||.|+|+ |.+|..++..|...+.  +++++|.++..  ...+........+.+ ......++++ +.++|.||++.
T Consensus         1 m~viIiG~-G~ig~~~a~~L~~~g~--~v~vid~~~~~--~~~~~~~~~~~~~~gd~~~~~~l~~~~~~~a~~vi~~~   73 (453)
T PRK09496          1 MKIIIVGA-GQVGYTLAENLSGENN--DVTVIDTDEER--LRRLQDRLDVRTVVGNGSSPDVLREAGAEDADLLIAVT   73 (453)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCC--cEEEEECCHHH--HHHHHhhcCEEEEEeCCCCHHHHHHcCCCcCCEEEEec
Confidence            69999999 9999999999988887  89999987622  122221110011111 0011234445 78999999974

>PRK06598 aspartate-semialdehyde dehydrogenase; Reviewed

Probab=95.41  E-value=0.053  Score=53.22  Aligned_cols=72  Identities=18%  Similarity=0.150  Sum_probs=44.1

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCC-C-CcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcCC
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINP-L-VSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG  119 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~-~-~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~ag  119 (354)
                      ++||+|+||+|.+|..+..+++..+ . ..+++++......+...++..    ....... ..+ .+.++++|+||++++
T Consensus         1 m~~VAIVGATG~vG~ell~llL~~~~f~~~~l~~~ss~~sg~~~~~f~g----~~~~v~~-~~~-~~~~~~~Divf~a~~   74 (369)
T PRK06598          1 MKKVGFVGWRGMVGSVLMQRMVEENDFDLIEPVFFSTSQAGGAAPSFGG----KEGTLQD-AFD-IDALKKLDIIITCQG   74 (369)
T ss_pred             CeEEEEEeCCCHHHHHHHHHHHhCCCCCcCcEEEecchhhCCcccccCC----CcceEEe-cCC-hhHhcCCCEEEECCC
Confidence            3699999999999999998565554 3 456888766432222212221    1112121 122 256789999999875

>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=95.38  E-value=0.063  Score=46.88  Aligned_cols=58  Identities=28%  Similarity=0.466  Sum_probs=45.4

Q ss_pred             CCCCCeEEEEcCCCc-hHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEc
Q 018512           39 GAAGFKVAILGAAGG-IGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIP  117 (354)
Q Consensus        39 ~~~~~kI~IiGa~G~-vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~  117 (354)
                      .-+..||+|+|+ |. +|..++..|...+.  +|.+.+++.                       .++.+.+++||+||.+
T Consensus        41 ~l~gk~vlViG~-G~~~G~~~a~~L~~~g~--~V~v~~r~~-----------------------~~l~~~l~~aDiVIsa   94 (168)
T cd01080          41 DLAGKKVVVVGR-SNIVGKPLAALLLNRNA--TVTVCHSKT-----------------------KNLKEHTKQADIVIVA   94 (168)
T ss_pred             CCCCCEEEEECC-cHHHHHHHHHHHhhCCC--EEEEEECCc-----------------------hhHHHHHhhCCEEEEc
Confidence            445679999999 86 58889999988876  788888641                       2456789999999998


Q ss_pred             CCCCC
Q 018512          118 AGVPR  122 (354)
Q Consensus       118 ag~~~  122 (354)
                      .+.+.
T Consensus        95 t~~~~   99 (168)
T cd01080          95 VGKPG   99 (168)
T ss_pred             CCCCc
Confidence            77663

NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a

>PRK07877 hypothetical protein; Provisional

Probab=95.36  E-value=0.059  Score=57.38  Aligned_cols=94  Identities=19%  Similarity=0.290  Sum_probs=59.1

Q ss_pred             ccchhhhhhhhcccCC--------CCCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC-----chhH-------
Q 018512           23 LQENSCLRQAKCRAKG--------GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN-----TPGV-------   82 (354)
Q Consensus        23 ~~~~~~~~~~~~~~~~--------~~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~-----~~g~-------   82 (354)
                      |.+..|.+..-+|-.+        +-+..||+|+|+ | +|+.++..|+..|.+.+|.|+|-|.     ++-+       
T Consensus        80 ~~~~~~~~~r~~Rn~~~ig~~~Q~~L~~~~V~IvG~-G-lGs~~a~~LaraGvvG~l~lvD~D~ve~sNLnRq~~~~~di  157 (722)
T PRK07877         80 LGPREFRAVRLDRNRNKITAEEQERLGRLRIGVVGL-S-VGHAIAHTLAAEGLCGELRLADFDTLELSNLNRVPAGVFDL  157 (722)
T ss_pred             CCHHHhhHHHhhchhhhCCHHHHHHHhcCCEEEEEe-c-HHHHHHHHHHHccCCCeEEEEcCCEEcccccccccCChhhc
Confidence            4666665544444431        334579999999 9 9999999999999767999999875     1101       


Q ss_pred             --------HHHHhcCCCCCeEEEEeC---CCcHHhhhCCCcEEEEcC
Q 018512           83 --------TADISHMDTGAVVRGFLG---QPQLENALTGMDLVIIPA  118 (354)
Q Consensus        83 --------~~dl~~~~~~~~v~~~~~---~~d~~~al~~aDvVIi~a  118 (354)
                              +..+........+..+..   ..+..+-+.++|+||-+.
T Consensus       158 G~~Kv~~a~~~l~~inp~i~v~~~~~~i~~~n~~~~l~~~DlVvD~~  204 (722)
T PRK07877        158 GVNKAVVAARRIAELDPYLPVEVFTDGLTEDNVDAFLDGLDVVVEEC  204 (722)
T ss_pred             ccHHHHHHHHHHHHHCCCCEEEEEeccCCHHHHHHHhcCCCEEEECC
Confidence                    111222222233444321   234556678999999973

>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional

Probab=95.35  E-value=0.15  Score=50.97  Aligned_cols=92  Identities=18%  Similarity=0.143  Sum_probs=59.7

Q ss_pred             CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcCCC
Q 018512           41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGV  120 (354)
Q Consensus        41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~ag~  120 (354)
                      ...+|+|+|. |.+|..++..+...|.  +|+++|+++.+....  .....    ..    .+++++++++|+||.+.|.
T Consensus       211 ~Gk~VlViG~-G~IG~~vA~~lr~~Ga--~ViV~d~dp~ra~~A--~~~G~----~v----~~l~eal~~aDVVI~aTG~  277 (425)
T PRK05476        211 AGKVVVVAGY-GDVGKGCAQRLRGLGA--RVIVTEVDPICALQA--AMDGF----RV----MTMEEAAELGDIFVTATGN  277 (425)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCC--EEEEEcCCchhhHHH--HhcCC----Ee----cCHHHHHhCCCEEEECCCC
Confidence            4569999999 9999999999988887  899999987322111  11111    11    1356788999999987542


Q ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCC
Q 018512          121 PRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPV  162 (354)
Q Consensus       121 ~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv  162 (354)
                      +               ..+.  .+.+....+.+++++++-+.
T Consensus       278 ~---------------~vI~--~~~~~~mK~GailiNvG~~d  302 (425)
T PRK05476        278 K---------------DVIT--AEHMEAMKDGAILANIGHFD  302 (425)
T ss_pred             H---------------HHHH--HHHHhcCCCCCEEEEcCCCC
Confidence            2               1221  12223334678888887543

>PRK07589 ornithine cyclodeaminase; Validated

Probab=95.35  E-value=0.087  Score=51.37  Aligned_cols=74  Identities=18%  Similarity=0.279  Sum_probs=51.9

Q ss_pred             CCCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEE
Q 018512           39 GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVII  116 (354)
Q Consensus        39 ~~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi  116 (354)
                      +....+++|||+ |..+..-+..++.-..+.+|.++|++.  .+..+.++.+.  ...+..   ..+.++++++||+|+.
T Consensus       126 r~da~~l~iiGa-G~QA~~~l~a~~~vr~i~~V~v~~r~~~~a~~~~~~~~~~--~~~v~~---~~~~~~av~~ADIIvt  199 (346)
T PRK07589        126 RPDSRTMALIGN-GAQSEFQALAFKALLGIEEIRLYDIDPAATAKLARNLAGP--GLRIVA---CRSVAEAVEGADIITT  199 (346)
T ss_pred             cCCCcEEEEECC-cHHHHHHHHHHHHhCCceEEEEEeCCHHHHHHHHHHHHhc--CCcEEE---eCCHHHHHhcCCEEEE
Confidence            445679999999 999888776555444567999999987  33444555542  123333   2467899999999998


Q ss_pred             cC
Q 018512          117 PA  118 (354)
Q Consensus       117 ~a  118 (354)
                      +.
T Consensus       200 aT  201 (346)
T PRK07589        200 VT  201 (346)
T ss_pred             ec
Confidence            64

>PRK07791 short chain dehydrogenase; Provisional

Probab=95.34  E-value=0.42  Score=44.89  Aligned_cols=34  Identities=29%  Similarity=0.437  Sum_probs=30.1

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecC
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVV   77 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~   77 (354)
                      .+.+.|+||++.+|..++..|+..|.  .|++.|.+
T Consensus         6 ~k~~lITGas~GIG~aia~~la~~G~--~vii~~~~   39 (286)
T PRK07791          6 GRVVIVTGAGGGIGRAHALAFAAEGA--RVVVNDIG   39 (286)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCC--EEEEeeCC
Confidence            35899999999999999999999887  88888875

>PRK07411 hypothetical protein; Validated

Probab=95.31  E-value=0.16  Score=50.37  Aligned_cols=35  Identities=23%  Similarity=0.433  Sum_probs=31.3

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   78 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~   78 (354)
                      ..||+|+|+ |.+|+.++..|+..|.. +|.|+|.+.
T Consensus        38 ~~~VlivG~-GGlG~~va~~La~~Gvg-~l~lvD~D~   72 (390)
T PRK07411         38 AASVLCIGT-GGLGSPLLLYLAAAGIG-RIGIVDFDV   72 (390)
T ss_pred             cCcEEEECC-CHHHHHHHHHHHHcCCC-EEEEECCCE
Confidence            348999999 99999999999999974 899999874

>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional

Probab=95.29  E-value=1.5  Score=40.47  Aligned_cols=35  Identities=26%  Similarity=0.238  Sum_probs=28.7

Q ss_pred             CCeEEEEcC--CCchHHHHHHHHHhCCCCcEEEEEecCC
Q 018512           42 GFKVAILGA--AGGIGQPLAMLMKINPLVSVLHLYDVVN   78 (354)
Q Consensus        42 ~~kI~IiGa--~G~vG~~~a~~l~~~~~~~ei~L~D~~~   78 (354)
                      .+.+.|+||  ++.+|..++..|+..|.  .|++.+++.
T Consensus         6 ~k~~lITGa~~~~GIG~a~a~~l~~~G~--~v~~~~~~~   42 (261)
T PRK08690          6 GKKILITGMISERSIAYGIAKACREQGA--ELAFTYVVD   42 (261)
T ss_pred             CcEEEEECCCCCCcHHHHHHHHHHHCCC--EEEEEcCcH
Confidence            357999996  46899999999999987  888877643

>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional

Probab=95.26  E-value=0.63  Score=43.41  Aligned_cols=150  Identities=13%  Similarity=0.128  Sum_probs=78.9

Q ss_pred             CeEEEEcCCC--chHHHHHHHHHhCCCCcEEEEEecCCc-hhHHHHHhcCCCCCeEEEEeCCCcH----------HhhhC
Q 018512           43 FKVAILGAAG--GIGQPLAMLMKINPLVSVLHLYDVVNT-PGVTADISHMDTGAVVRGFLGQPQL----------ENALT  109 (354)
Q Consensus        43 ~kI~IiGa~G--~vG~~~a~~l~~~~~~~ei~L~D~~~~-~g~~~dl~~~~~~~~v~~~~~~~d~----------~~al~  109 (354)
                      +.+.|+||++  .+|..++..|+..|.  .|++.|++.. .....++.+..... +-...+-+|.          .+.+.
T Consensus         8 k~~lVTGas~~~GIG~aiA~~la~~Ga--~V~~~~r~~~~~~~~~~~~~~~g~~-~~~~~Dv~d~~~v~~~~~~~~~~~g   84 (271)
T PRK06505          8 KRGLIMGVANDHSIAWGIAKQLAAQGA--ELAFTYQGEALGKRVKPLAESLGSD-FVLPCDVEDIASVDAVFEALEKKWG   84 (271)
T ss_pred             CEEEEeCCCCCCcHHHHHHHHHHhCCC--EEEEecCchHHHHHHHHHHHhcCCc-eEEeCCCCCHHHHHHHHHHHHHHhC
Confidence            4789999964  799999999999997  8999987642 11122232111001 1000011121          12235


Q ss_pred             CCcEEEEcCCCCCCC-------CCCHH---HHHHHHHHHH----HHHHHHHhhhCCCeEEEEecCCCCCchHHHHHHHHH
Q 018512          110 GMDLVIIPAGVPRKP-------GMTRD---DLFNINAGIV----RTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKK  175 (354)
Q Consensus       110 ~aDvVIi~ag~~~~~-------g~~r~---d~~~~n~~~~----~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~~~~~~  175 (354)
                      ..|++|+.||.....       ..+..   ..+..|+...    +.+.+.|+   ..+.||++|......          
T Consensus        85 ~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~m~---~~G~Iv~isS~~~~~----------  151 (271)
T PRK06505         85 KLDFVVHAIGFSDKNELKGRYADTTRENFSRTMVISCFSFTEIAKRAAKLMP---DGGSMLTLTYGGSTR----------  151 (271)
T ss_pred             CCCEEEECCccCCCccccCChhhcCHHHHHHHHhhhhhhHHHHHHHHHHhhc---cCceEEEEcCCCccc----------
Confidence            789999999864311       12222   2334454443    44444444   246666665432211          


Q ss_pred             hCCCCCCCEEEeccchHHHHHHHHHHHhCCCCCCCcc
Q 018512          176 AGTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDV  212 (354)
Q Consensus       176 ~~~~p~~kviG~t~ld~~r~~~~la~~l~v~~~~v~~  212 (354)
                        +.|..-.++.+.-.-..+.+.+|..++  +..|++
T Consensus       152 --~~~~~~~Y~asKaAl~~l~r~la~el~--~~gIrV  184 (271)
T PRK06505        152 --VMPNYNVMGVAKAALEASVRYLAADYG--PQGIRV  184 (271)
T ss_pred             --cCCccchhhhhHHHHHHHHHHHHHHHh--hcCeEE
Confidence              233233455554444567777887763  444433

>PRK05671 aspartate-semialdehyde dehydrogenase; Reviewed

Probab=95.25  E-value=0.048  Score=53.00  Aligned_cols=72  Identities=21%  Similarity=0.380  Sum_probs=45.2

Q ss_pred             CCCeEEEEcCCCchHHHHHHHHHhCCC-CcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcCC
Q 018512           41 AGFKVAILGAAGGIGQPLAMLMKINPL-VSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG  119 (354)
Q Consensus        41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~-~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~ag  119 (354)
                      +++||+|+||+|++|.-++..|..+++ ..++.++-..+..|....+..    ..+... . .+. ++++++|+||++.+
T Consensus         3 ~~~~IaIvGATG~vG~eLlrlL~~~~hP~~~l~~v~s~~~aG~~l~~~~----~~l~~~-~-~~~-~~~~~vD~vFla~p   75 (336)
T PRK05671          3 QPLDIAVVGATGTVGEALVQILEERDFPVGTLHLLASSESAGHSVPFAG----KNLRVR-E-VDS-FDFSQVQLAFFAAG   75 (336)
T ss_pred             CCCEEEEEccCCHHHHHHHHHHhhCCCCceEEEEEECcccCCCeeccCC----cceEEe-e-CCh-HHhcCCCEEEEcCC
Confidence            457999999999999999999987653 447777755432222222221    122221 1 122 34789999999754

>PRK06823 ornithine cyclodeaminase; Validated

Probab=95.24  E-value=0.13  Score=49.51  Aligned_cols=74  Identities=14%  Similarity=0.108  Sum_probs=51.6

Q ss_pred             CCCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc--hhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEE
Q 018512           39 GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVII  116 (354)
Q Consensus        39 ~~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~--~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi  116 (354)
                      +....+++|||+ |..+..-+..+..-..+.+|.++|++..  +..+..+.+.  ...+...   .+.++++++||+|+.
T Consensus       125 ~~d~~~l~iiG~-G~qA~~~~~a~~~v~~i~~v~v~~r~~~~a~~~~~~~~~~--~~~v~~~---~~~~~av~~ADIV~t  198 (315)
T PRK06823        125 PQHVSAIGIVGT-GIQARMQLMYLKNVTDCRQLWVWGRSETALEEYRQYAQAL--GFAVNTT---LDAAEVAHAANLIVT  198 (315)
T ss_pred             CCCCCEEEEECC-cHHHHHHHHHHHhcCCCCEEEEECCCHHHHHHHHHHHHhc--CCcEEEE---CCHHHHhcCCCEEEE
Confidence            445679999999 9998887777765555689999999872  3333333332  1234332   456899999999998


Q ss_pred             cC
Q 018512          117 PA  118 (354)
Q Consensus       117 ~a  118 (354)
                      +.
T Consensus       199 aT  200 (315)
T PRK06823        199 TT  200 (315)
T ss_pred             ec
Confidence            64

>cd01079 NAD_bind_m-THF_DH NAD binding domain of methylene-tetrahydrofolate dehydrogenase

Probab=95.24  E-value=0.077  Score=47.33  Aligned_cols=78  Identities=21%  Similarity=0.237  Sum_probs=51.4

Q ss_pred             CCCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc--hhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEE
Q 018512           39 GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVII  116 (354)
Q Consensus        39 ~~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~--~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi  116 (354)
                      +-...+|+|||.+..||..++.+|..++.  .|.++|++..  +.....+.|....  .+.  .+.++.+.++.||+||.
T Consensus        59 ~l~GK~vvVIGrS~iVGkPla~lL~~~~A--tVti~~~~~~~~~~~~~~~~hs~t~--~~~--~~~~l~~~~~~ADIVIs  132 (197)
T cd01079          59 RLYGKTITIINRSEVVGRPLAALLANDGA--RVYSVDINGIQVFTRGESIRHEKHH--VTD--EEAMTLDCLSQSDVVIT  132 (197)
T ss_pred             CCCCCEEEEECCCccchHHHHHHHHHCCC--EEEEEecCccccccccccccccccc--ccc--hhhHHHHHhhhCCEEEE
Confidence            34567999999988999999999998886  8999998751  1000011111100  000  01126678899999999


Q ss_pred             cCCCCC
Q 018512          117 PAGVPR  122 (354)
Q Consensus       117 ~ag~~~  122 (354)
                      +.|.+.
T Consensus       133 AvG~~~  138 (197)
T cd01079         133 GVPSPN  138 (197)
T ss_pred             ccCCCC
Confidence            988763

The NAD-binding domain of methylene-tetrahydrofolate dehydrogenase (m-THF DH). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. M-THF DH is a component of an unusual monofunctional enzyme; in eukaryotes, m-THF DH is typically found as part of a multifunctional protein. NADP-dependent m-THF DHs in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofunctional DH, as well as bifunctional DH/cyclodrolase are found. In addition, yeast (S. cerevisiae) also express an monofunctional DH. This family contains only the monofunctional

>TIGR01327 PGDH D-3-phosphoglycerate dehydrogenase

Probab=95.23  E-value=0.084  Score=54.42  Aligned_cols=65  Identities=22%  Similarity=0.323  Sum_probs=46.9

Q ss_pred             CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcC
Q 018512           41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA  118 (354)
Q Consensus        41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~a  118 (354)
                      ..++|.|+|. |.+|+.+|..|..-|.  +|+.||.........++   .    +..   ..++++.+++||+|++..
T Consensus       137 ~gktvgIiG~-G~IG~~vA~~l~~fG~--~V~~~d~~~~~~~~~~~---g----~~~---~~~l~ell~~aDvV~l~l  201 (525)
T TIGR01327       137 YGKTLGVIGL-GRIGSIVAKRAKAFGM--KVLAYDPYISPERAEQL---G----VEL---VDDLDELLARADFITVHT  201 (525)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCC--EEEEECCCCChhHHHhc---C----CEE---cCCHHHHHhhCCEEEEcc
Confidence            4569999999 9999999999987676  99999975322111111   1    111   135788999999999974

This model represents a long form of D-3-phosphoglycerate dehydrogenase, the serA gene of one pathway of serine biosynthesis. Shorter forms, scoring between trusted and noise cutoff, include SerA from E. coli.

>PLN02383 aspartate semialdehyde dehydrogenase

Probab=95.22  E-value=0.045  Score=53.32  Aligned_cols=71  Identities=23%  Similarity=0.390  Sum_probs=45.3

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCC-CcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcCC
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPL-VSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG  119 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~-~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~ag  119 (354)
                      ++||+|+||+|.+|..+...|..+++ ..++..+......|...+..  .  ..+...  ..+ .+++.++|+||++++
T Consensus         7 ~~kVaVvGAtG~vG~eLlrlL~~~~hP~~~l~~las~rsaGk~~~~~--~--~~~~v~--~~~-~~~~~~~D~vf~a~p   78 (344)
T PLN02383          7 GPSVAIVGVTGAVGQEFLSVLTDRDFPYSSLKMLASARSAGKKVTFE--G--RDYTVE--ELT-EDSFDGVDIALFSAG   78 (344)
T ss_pred             CCeEEEEcCCChHHHHHHHHHHhCCCCcceEEEEEccCCCCCeeeec--C--ceeEEE--eCC-HHHHcCCCEEEECCC
Confidence            47999999999999999998887653 45776665543222222111  1  122221  123 356799999999865

>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1

Probab=95.20  E-value=0.19  Score=44.92  Aligned_cols=35  Identities=17%  Similarity=0.391  Sum_probs=30.9

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   78 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~   78 (354)
                      ..||+|+|+ |.+|+.++..|+..|. .+++++|.+.
T Consensus        21 ~s~VlIiG~-gglG~evak~La~~GV-g~i~lvD~d~   55 (197)
T cd01492          21 SARILLIGL-KGLGAEIAKNLVLSGI-GSLTILDDRT   55 (197)
T ss_pred             hCcEEEEcC-CHHHHHHHHHHHHcCC-CEEEEEECCc
Confidence            458999999 8899999999999997 4899999874

Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.

>TIGR01289 LPOR light-dependent protochlorophyllide reductase

Probab=95.19  E-value=0.28  Score=46.81  Aligned_cols=113  Identities=13%  Similarity=0.057  Sum_probs=64.4

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCC-CCcEEEEEecCCc--hhHHHHHhcCCCCCeEEEE-eCCCc---HHhh-------h
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINP-LVSVLHLYDVVNT--PGVTADISHMDTGAVVRGF-LGQPQ---LENA-------L  108 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~-~~~ei~L~D~~~~--~g~~~dl~~~~~~~~v~~~-~~~~d---~~~a-------l  108 (354)
                      +.+.|+||++.+|..++..|+..| .  .|++.+++..  .....++....  ..+..+ .+-++   .+++       +
T Consensus         4 k~vlITGas~GIG~aia~~L~~~G~~--~V~l~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dl~~~~~v~~~~~~~~~~~   79 (314)
T TIGR01289         4 PTVIITGASSGLGLYAAKALAATGEW--HVIMACRDFLKAEQAAKSLGMPK--DSYTIMHLDLGSLDSVRQFVQQFRESG   79 (314)
T ss_pred             CEEEEECCCChHHHHHHHHHHHcCCC--EEEEEeCCHHHHHHHHHHhcCCC--CeEEEEEcCCCCHHHHHHHHHHHHHhC
Confidence            378999999999999999999888 6  8999988752  22222332111  112211 11112   1111       3


Q ss_pred             CCCcEEEEcCCCCCCC----CCCHH---HHHHHHH----HHHHHHHHHHhhhCC-CeEEEEec
Q 018512          109 TGMDLVIIPAGVPRKP----GMTRD---DLFNINA----GIVRTLCEGIAKCCP-NATVNLIS  159 (354)
Q Consensus       109 ~~aDvVIi~ag~~~~~----g~~r~---d~~~~n~----~~~~~i~~~i~~~~p-~a~viv~t  159 (354)
                      ...|++|+.||.....    ..+..   ..+.-|+    ..++.+.+.+++... .+.||++|
T Consensus        80 ~~iD~lI~nAG~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~g~IV~vs  142 (314)
T TIGR01289        80 RPLDALVCNAAVYFPTAKEPRFTADGFELSVGTNHLGHFLLCNLLLDDLKNSPNKDKRLIIVG  142 (314)
T ss_pred             CCCCEEEECCCccccCccccccCHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCCCCCeEEEEe
Confidence            4689999999863221    12222   2334454    446666777765432 35566654

This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.

>PRK13581 D-3-phosphoglycerate dehydrogenase; Provisional

Probab=95.18  E-value=0.082  Score=54.53  Aligned_cols=92  Identities=23%  Similarity=0.329  Sum_probs=58.7

Q ss_pred             CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcCCC
Q 018512           41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGV  120 (354)
Q Consensus        41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~ag~  120 (354)
                      ..++|.|+|. |.+|+.+|..+..-|.  +|+.||.........+   ..    +...    ++++.++.||+|++....
T Consensus       139 ~gktvgIiG~-G~IG~~vA~~l~~fG~--~V~~~d~~~~~~~~~~---~g----~~~~----~l~ell~~aDiV~l~lP~  204 (526)
T PRK13581        139 YGKTLGIIGL-GRIGSEVAKRAKAFGM--KVIAYDPYISPERAAQ---LG----VELV----SLDELLARADFITLHTPL  204 (526)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCC--EEEEECCCCChhHHHh---cC----CEEE----cHHHHHhhCCEEEEccCC
Confidence            4569999999 9999999999987776  9999998542211111   11    1211    467889999999997532


Q ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 018512          121 PRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  159 (354)
Q Consensus       121 ~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~t  159 (354)
                      ..           .+..++.  .+.+....|++++|+++
T Consensus       205 t~-----------~t~~li~--~~~l~~mk~ga~lIN~a  230 (526)
T PRK13581        205 TP-----------ETRGLIG--AEELAKMKPGVRIINCA  230 (526)
T ss_pred             Ch-----------HhhcCcC--HHHHhcCCCCeEEEECC
Confidence            21           1111110  12333334788888886

>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF)

Probab=95.15  E-value=0.11  Score=44.99  Aligned_cols=58  Identities=26%  Similarity=0.435  Sum_probs=42.3

Q ss_pred             CCCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcC
Q 018512           39 GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA  118 (354)
Q Consensus        39 ~~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~a  118 (354)
                      +-+.++|+|||.+..||..++.+|..++.  .+.+.+.+                       |.++++.++.||+||.++
T Consensus        33 ~l~Gk~v~VvGrs~~VG~Pla~lL~~~~a--tVt~~h~~-----------------------T~~l~~~~~~ADIVVsa~   87 (160)
T PF02882_consen   33 DLEGKKVVVVGRSNIVGKPLAMLLLNKGA--TVTICHSK-----------------------TKNLQEITRRADIVVSAV   87 (160)
T ss_dssp             STTT-EEEEE-TTTTTHHHHHHHHHHTT---EEEEE-TT-----------------------SSSHHHHHTTSSEEEE-S
T ss_pred             CCCCCEEEEECCcCCCChHHHHHHHhCCC--eEEeccCC-----------------------CCcccceeeeccEEeeee
Confidence            34567999999988899999999998876  66666643                       235677789999999998


Q ss_pred             CCC
Q 018512          119 GVP  121 (354)
Q Consensus       119 g~~  121 (354)
                      |.|
T Consensus        88 G~~   90 (160)
T PF02882_consen   88 GKP   90 (160)
T ss_dssp             SST
T ss_pred             ccc
Confidence            876

Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....

>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional

Probab=95.15  E-value=0.13  Score=52.73  Aligned_cols=107  Identities=15%  Similarity=0.170  Sum_probs=65.0

Q ss_pred             CCCCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC-chhHHHHHhcCCCCCeEEEE-----------eCCCcH-
Q 018512           38 GGAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN-TPGVTADISHMDTGAVVRGF-----------LGQPQL-  104 (354)
Q Consensus        38 ~~~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~-~~g~~~dl~~~~~~~~v~~~-----------~~~~d~-  104 (354)
                      +..++.||+|+|+ |.+|...+..+...|.  +|+.+|.++ ...++..+.--  ...+...           ..+.++ 
T Consensus       161 G~~pg~kVlViGa-G~iGL~Ai~~Ak~lGA--~V~a~D~~~~rle~aeslGA~--~v~i~~~e~~~~~~gya~~~s~~~~  235 (509)
T PRK09424        161 GKVPPAKVLVIGA-GVAGLAAIGAAGSLGA--IVRAFDTRPEVAEQVESMGAE--FLELDFEEEGGSGDGYAKVMSEEFI  235 (509)
T ss_pred             CCcCCCEEEEECC-cHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHcCCe--EEEeccccccccccchhhhcchhHH
Confidence            4666789999999 9999999888888886  799999987 33333332210  0001000           001121 


Q ss_pred             -------HhhhCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCC
Q 018512          105 -------ENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNP  161 (354)
Q Consensus       105 -------~~al~~aDvVIi~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNP  161 (354)
                             .+.++++|+||.+++.|.+....         -+.++..+.++   |.+.|+.++.+
T Consensus       236 ~~~~~~~~~~~~gaDVVIetag~pg~~aP~---------lit~~~v~~mk---pGgvIVdvg~~  287 (509)
T PRK09424        236 KAEMALFAEQAKEVDIIITTALIPGKPAPK---------LITAEMVASMK---PGSVIVDLAAE  287 (509)
T ss_pred             HHHHHHHHhccCCCCEEEECCCCCcccCcc---------hHHHHHHHhcC---CCCEEEEEccC
Confidence                   12236899999999987532110         11244455444   78888777764

>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases

Probab=95.14  E-value=0.17  Score=42.84  Aligned_cols=115  Identities=18%  Similarity=0.177  Sum_probs=70.9

Q ss_pred             eEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC----chhHHHHHhcCCCCCeEEEEeC-CCcH----------Hhhh
Q 018512           44 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN----TPGVTADISHMDTGAVVRGFLG-QPQL----------ENAL  108 (354)
Q Consensus        44 kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~----~~g~~~dl~~~~~~~~v~~~~~-~~d~----------~~al  108 (354)
                      .+.|+||+|.+|..++..|+..+. ..|+++++++    ......++....  ..+..+.. ..+.          .+..
T Consensus         2 ~~lItGa~~giG~~~a~~l~~~g~-~~v~~~~r~~~~~~~~~l~~~l~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~   78 (167)
T PF00106_consen    2 TVLITGASSGIGRALARALARRGA-RVVILTSRSEDSEGAQELIQELKAPG--AKITFIECDLSDPESIRALIEEVIKRF   78 (167)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTT-EEEEEEESSCHHHHHHHHHHHHHHTT--SEEEEEESETTSHHHHHHHHHHHHHHH
T ss_pred             EEEEECCCCHHHHHHHHHHHhcCc-eEEEEeeecccccccccccccccccc--ccccccccccccccccccccccccccc
Confidence            588999999999999999999843 2788888872    222233344222  23333211 1111          2334


Q ss_pred             CCCcEEEEcCCCCCCCC---CC---HHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCC
Q 018512          109 TGMDLVIIPAGVPRKPG---MT---RDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPV  162 (354)
Q Consensus       109 ~~aDvVIi~ag~~~~~g---~~---r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv  162 (354)
                      ...|++|.++|......   ++   ....+..|+.....+.+.+.. .+.+.|+++|...
T Consensus        79 ~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~-~~~g~iv~~sS~~  137 (167)
T PF00106_consen   79 GPLDILINNAGIFSDGSLDDLSEEELERVFRVNLFGPFLLAKALLP-QGGGKIVNISSIA  137 (167)
T ss_dssp             SSESEEEEECSCTTSBSGGGSHHHHHHHHHHHHTHHHHHHHHHHHH-HTTEEEEEEEEGG
T ss_pred             ccccccccccccccccccccccchhhhhccccccceeeeeeehhee-ccccceEEecchh
Confidence            68999999998765221   11   224556676666667777766 4577777776433

As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....

>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=95.14  E-value=0.25  Score=45.42  Aligned_cols=34  Identities=12%  Similarity=0.113  Sum_probs=28.0

Q ss_pred             CCCeEEEEcCCC--chHHHHHHHHHhCCCCcEEEEEec
Q 018512           41 AGFKVAILGAAG--GIGQPLAMLMKINPLVSVLHLYDV   76 (354)
Q Consensus        41 ~~~kI~IiGa~G--~vG~~~a~~l~~~~~~~ei~L~D~   76 (354)
                      +.++|.|+||+|  .+|..++..|+..|.  .|++.++
T Consensus         5 ~~k~vlVtGas~~~giG~~~a~~l~~~G~--~vi~~~~   40 (256)
T PRK12859          5 KNKVAVVTGVSRLDGIGAAICKELAEAGA--DIFFTYW   40 (256)
T ss_pred             CCcEEEEECCCCCCChHHHHHHHHHHCCC--eEEEEec
Confidence            345899999964  799999999999887  7887753

>COG0136 Asd Aspartate-semialdehyde dehydrogenase [Amino acid transport and metabolism]

Probab=95.14  E-value=0.081  Score=50.96  Aligned_cols=73  Identities=26%  Similarity=0.381  Sum_probs=46.9

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCC-CCcEEEEEecCCchhHH-HHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcCC
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINP-LVSVLHLYDVVNTPGVT-ADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG  119 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~-~~~ei~L~D~~~~~g~~-~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~ag  119 (354)
                      ++||+|+||+|.||+.+...|..+. .+.++.++-.....|.. .++..-..  .+..  ...| ...++++|+|++++|
T Consensus         1 ~~~VavvGATG~VG~~~~~~L~e~~f~~~~~~~~AS~rSaG~~~~~f~~~~~--~v~~--~~~~-~~~~~~~Divf~~ag   75 (334)
T COG0136           1 KLNVAVLGATGAVGQVLLELLEERHFPFEELVLLASARSAGKKYIEFGGKSI--GVPE--DAAD-EFVFSDVDIVFFAAG   75 (334)
T ss_pred             CcEEEEEeccchHHHHHHHHHHhcCCCcceEEEEecccccCCccccccCccc--cCcc--cccc-ccccccCCEEEEeCc
Confidence            4699999999999999999999854 56667777765533332 32222110  0110  0123 245679999999976

>KOG0409 consensus Predicted dehydrogenase [General function prediction only]

Probab=95.13  E-value=0.082  Score=50.02  Aligned_cols=68  Identities=15%  Similarity=0.245  Sum_probs=51.7

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcCCCC
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVP  121 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~ag~~  121 (354)
                      .++|..||- |.+|++.+..|+..|+  .|+.||++.  ....++.+...  .+.     ..+.|..+++|+||...+.|
T Consensus        35 ~~~iGFIGL-G~MG~~M~~nLik~G~--kVtV~dr~~--~k~~~f~~~Ga--~v~-----~sPaeVae~sDvvitmv~~~  102 (327)
T KOG0409|consen   35 KTRIGFIGL-GNMGSAMVSNLIKAGY--KVTVYDRTK--DKCKEFQEAGA--RVA-----NSPAEVAEDSDVVITMVPNP  102 (327)
T ss_pred             cceeeEEee-ccchHHHHHHHHHcCC--EEEEEeCcH--HHHHHHHHhch--hhh-----CCHHHHHhhcCEEEEEcCCh
Confidence            579999999 9999999999999999  999999865  23345555432  121     23467789999999976543

>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=95.12  E-value=0.055  Score=49.80  Aligned_cols=72  Identities=17%  Similarity=0.159  Sum_probs=49.5

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEE--EeCCCcHHhhhCCCcEEEEcCCC
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRG--FLGQPQLENALTGMDLVIIPAGV  120 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~--~~~~~d~~~al~~aDvVIi~ag~  120 (354)
                      |+|.|+||+|++|++++..|+..+.  +|+..-++.......  . .  ...+..  +.....+..+++|.|.++++.+.
T Consensus         1 ~~ilV~GatG~~G~~~~~~L~~~~~--~v~~~~r~~~~~~~~--~-~--~v~~~~~d~~~~~~l~~a~~G~~~~~~i~~~   73 (275)
T COG0702           1 MKILVTGATGFVGGAVVRELLARGH--EVRAAVRNPEAAAAL--A-G--GVEVVLGDLRDPKSLVAGAKGVDGVLLISGL   73 (275)
T ss_pred             CeEEEEecccchHHHHHHHHHhCCC--EEEEEEeCHHHHHhh--c-C--CcEEEEeccCCHhHHHHHhccccEEEEEecc
Confidence            6899999999999999999998876  777777665222222  2 1  112211  22234567889999999998654


Q ss_pred             C
Q 018512          121 P  121 (354)
Q Consensus       121 ~  121 (354)
                      .
T Consensus        74 ~   74 (275)
T COG0702          74 L   74 (275)
T ss_pred             c
Confidence            4

>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=95.11  E-value=0.38  Score=40.38  Aligned_cols=112  Identities=24%  Similarity=0.210  Sum_probs=63.7

Q ss_pred             eEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhH---HHHHhcCCCCCeEEEEe-CCCc---HHhhh------
Q 018512           44 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGV---TADISHMDTGAVVRGFL-GQPQ---LENAL------  108 (354)
Q Consensus        44 kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~---~~dl~~~~~~~~v~~~~-~~~d---~~~al------  108 (354)
                      ++.|+||+|.+|.+++..|..++. ..+++.++++  ....   ..++....  ..+..+. +-++   +.+.+      
T Consensus         2 ~~li~Ga~~~iG~~~~~~l~~~g~-~~v~~~~r~~~~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~   78 (180)
T smart00822        2 TYLITGGLGGLGLELARWLAERGA-RHLVLLSRSGPDAPGAAELLAELEALG--AEVTVVACDVADRAALAAALAAIPAR   78 (180)
T ss_pred             EEEEEcCCChHHHHHHHHHHHhhC-CeEEEEeCCCCCCccHHHHHHHHHhcC--CeEEEEECCCCCHHHHHHHHHHHHHH
Confidence            689999999999999999988774 1566676654  1111   12333221  2222211 1111   12222      


Q ss_pred             -CCCcEEEEcCCCCCCC---CCC---HHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 018512          109 -TGMDLVIIPAGVPRKP---GMT---RDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  159 (354)
Q Consensus       109 -~~aDvVIi~ag~~~~~---g~~---r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~t  159 (354)
                       ...|.||+.+|.....   ..+   ....+..|+.....+.+.+.+..+. .++++|
T Consensus        79 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~ii~~s  135 (180)
T smart00822       79 LGPLRGVIHAAGVLDDGLLANLTPERFAAVLAPKVDGAWNLHELTRDLPLD-FFVLFS  135 (180)
T ss_pred             cCCeeEEEEccccCCccccccCCHHHHHHhhchHhHHHHHHHHHhccCCcc-eEEEEc
Confidence             3359999998854211   111   2334667888888888888655444 444444

It uses NADPH to reduce the keto group to a hydroxy group.

>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase

Probab=95.11  E-value=0.37  Score=55.24  Aligned_cols=120  Identities=11%  Similarity=0.000  Sum_probs=71.5

Q ss_pred             CCCCeEEEEcCCCchHHHHHHHHHhCC--CCcEEEEEecCCchh-HHHHHhc----CC-----CCCeEEEEeC-------
Q 018512           40 AAGFKVAILGAAGGIGQPLAMLMKINP--LVSVLHLYDVVNTPG-VTADISH----MD-----TGAVVRGFLG-------  100 (354)
Q Consensus        40 ~~~~kI~IiGa~G~vG~~~a~~l~~~~--~~~ei~L~D~~~~~g-~~~dl~~----~~-----~~~~v~~~~~-------  100 (354)
                      ..+++|.|+||+|++|++++..|+..+  ...+|+...+..... ....+.+    ..     ...++..+.+       
T Consensus       969 ~~~~~VlvTGatGflG~~l~~~Ll~~~~~~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~gDl~~~~l 1048 (1389)
T TIGR03443       969 STPITVFLTGATGFLGSFILRDLLTRRSNSNFKVFAHVRAKSEEAGLERLRKTGTTYGIWDEEWASRIEVVLGDLSKEKF 1048 (1389)
T ss_pred             CCCceEEEeCCccccHHHHHHHHHhcCCCCCcEEEEEECcCChHHHHHHHHHHHHHhCCCchhhhcceEEEeccCCCccC
Confidence            345799999999999999999888766  333666665543111 1111111    00     0012222211       


Q ss_pred             ---CCcHHhhhCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecC
Q 018512          101 ---QPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISN  160 (354)
Q Consensus       101 ---~~d~~~al~~aDvVIi~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tN  160 (354)
                         ...+.+...++|+||++|+... ......++...|+....++++.+.+...+.++.+.|.
T Consensus      1049 gl~~~~~~~l~~~~d~iiH~Aa~~~-~~~~~~~~~~~nv~gt~~ll~~a~~~~~~~~v~vSS~ 1110 (1389)
T TIGR03443      1049 GLSDEKWSDLTNEVDVIIHNGALVH-WVYPYSKLRDANVIGTINVLNLCAEGKAKQFSFVSST 1110 (1389)
T ss_pred             CcCHHHHHHHHhcCCEEEECCcEec-CccCHHHHHHhHHHHHHHHHHHHHhCCCceEEEEeCe
Confidence               1123445578999999987543 2223444445799999999999887655555555554

Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.

>PRK07370 enoyl-(acyl carrier protein) reductase; Validated

Probab=95.10  E-value=0.33  Score=44.79  Aligned_cols=153  Identities=14%  Similarity=0.199  Sum_probs=78.4

Q ss_pred             CeEEEEcCC--CchHHHHHHHHHhCCCCcEEEEEecCCc----hhHHHHHhcCCCCCe-EEE-EeCCCcHH-------hh
Q 018512           43 FKVAILGAA--GGIGQPLAMLMKINPLVSVLHLYDVVNT----PGVTADISHMDTGAV-VRG-FLGQPQLE-------NA  107 (354)
Q Consensus        43 ~kI~IiGa~--G~vG~~~a~~l~~~~~~~ei~L~D~~~~----~g~~~dl~~~~~~~~-v~~-~~~~~d~~-------~a  107 (354)
                      +.+.|+||+  +.+|..++..|+..|.  +|++.+.+..    .....++........ +.. .....+..       +.
T Consensus         7 k~~lItGas~~~GIG~aia~~la~~G~--~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~   84 (258)
T PRK07370          7 KKALVTGIANNRSIAWGIAQQLHAAGA--ELGITYLPDEKGRFEKKVRELTEPLNPSLFLPCDVQDDAQIEETFETIKQK   84 (258)
T ss_pred             cEEEEeCCCCCCchHHHHHHHHHHCCC--EEEEEecCcccchHHHHHHHHHhccCcceEeecCcCCHHHHHHHHHHHHHH
Confidence            478999985  5899999999999888  7887765431    112223322111110 110 11111111       22


Q ss_pred             hCCCcEEEEcCCCCCC---CC----CCHH---HHHHHHH----HHHHHHHHHHhhhCCCeEEEEecCCCCCchHHHHHHH
Q 018512          108 LTGMDLVIIPAGVPRK---PG----MTRD---DLFNINA----GIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVF  173 (354)
Q Consensus       108 l~~aDvVIi~ag~~~~---~g----~~r~---d~~~~n~----~~~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~~~~  173 (354)
                      +...|++|+.+|....   .+    .+..   ..+..|+    ...+.+.+.+++   .+.|+++|......        
T Consensus        85 ~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~---~g~Iv~isS~~~~~--------  153 (258)
T PRK07370         85 WGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSE---GGSIVTLTYLGGVR--------  153 (258)
T ss_pred             cCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhh---CCeEEEEecccccc--------
Confidence            3468999999986431   11    1222   2233343    344555555543   46677666432211        


Q ss_pred             HHhCCCCCCCEEEeccchHHHHHHHHHHHhCCCCCCCcceE
Q 018512          174 KKAGTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPV  214 (354)
Q Consensus       174 ~~~~~~p~~kviG~t~ld~~r~~~~la~~l~v~~~~v~~~v  214 (354)
                          +.|..-.++.+.-.-..+.+.++..++  +..|++..
T Consensus       154 ----~~~~~~~Y~asKaal~~l~~~la~el~--~~gI~Vn~  188 (258)
T PRK07370        154 ----AIPNYNVMGVAKAALEASVRYLAAELG--PKNIRVNA  188 (258)
T ss_pred             ----CCcccchhhHHHHHHHHHHHHHHHHhC--cCCeEEEE
Confidence                233333455544444556777777764  44554433

>TIGR00518 alaDH alanine dehydrogenase

Probab=95.09  E-value=0.079  Score=52.18  Aligned_cols=78  Identities=19%  Similarity=0.244  Sum_probs=51.7

Q ss_pred             CCCCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEE-EeCCCcHHhhhCCCcEEEE
Q 018512           38 GGAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRG-FLGQPQLENALTGMDLVII  116 (354)
Q Consensus        38 ~~~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~-~~~~~d~~~al~~aDvVIi  116 (354)
                      ++.++.||+|+|+ |.+|...+..+...|.  +|..+|++....  ..+.... ...+.. .....++.+.++++|+||.
T Consensus       163 ~~l~~~~VlViGa-G~vG~~aa~~a~~lGa--~V~v~d~~~~~~--~~l~~~~-g~~v~~~~~~~~~l~~~l~~aDvVI~  236 (370)
T TIGR00518       163 PGVEPGDVTIIGG-GVVGTNAAKMANGLGA--TVTILDINIDRL--RQLDAEF-GGRIHTRYSNAYEIEDAVKRADLLIG  236 (370)
T ss_pred             CCCCCceEEEEcC-CHHHHHHHHHHHHCCC--eEEEEECCHHHH--HHHHHhc-CceeEeccCCHHHHHHHHccCCEEEE
Confidence            4456678999999 9999999999988886  799999875221  1122111 111111 1112346678899999999


Q ss_pred             cCCCC
Q 018512          117 PAGVP  121 (354)
Q Consensus       117 ~ag~~  121 (354)
                      +.+.+
T Consensus       237 a~~~~  241 (370)
T TIGR00518       237 AVLIP  241 (370)
T ss_pred             ccccC
Confidence            87554

The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.

>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional

Probab=95.08  E-value=0.36  Score=45.09  Aligned_cols=158  Identities=15%  Similarity=0.164  Sum_probs=81.5

Q ss_pred             CCeEEEEcCC--CchHHHHHHHHHhCCCCcEEEEEecCC-chhHHHHHhcC-CCCCeEEE-EeCCCcH-------HhhhC
Q 018512           42 GFKVAILGAA--GGIGQPLAMLMKINPLVSVLHLYDVVN-TPGVTADISHM-DTGAVVRG-FLGQPQL-------ENALT  109 (354)
Q Consensus        42 ~~kI~IiGa~--G~vG~~~a~~l~~~~~~~ei~L~D~~~-~~g~~~dl~~~-~~~~~v~~-~~~~~d~-------~~al~  109 (354)
                      .+++.|+||+  +-+|..++..|+..|.  .|++.++++ ......++... .....+.. .....+.       .+.+.
T Consensus        10 ~k~~lItGas~~~GIG~aia~~la~~G~--~V~l~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g   87 (272)
T PRK08159         10 GKRGLILGVANNRSIAWGIAKACRAAGA--ELAFTYQGDALKKRVEPLAAELGAFVAGHCDVTDEASIDAVFETLEKKWG   87 (272)
T ss_pred             CCEEEEECCCCCCcHHHHHHHHHHHCCC--EEEEEcCchHHHHHHHHHHHhcCCceEEecCCCCHHHHHHHHHHHHHhcC
Confidence            3479999995  5799999999999998  888887653 12222222211 11000111 0011111       12234


Q ss_pred             CCcEEEEcCCCCCC-----C--CCCH---HHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecCCCCCchHHHHHHHHHhCC
Q 018512          110 GMDLVIIPAGVPRK-----P--GMTR---DDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNSTVPIAAEVFKKAGT  178 (354)
Q Consensus       110 ~aDvVIi~ag~~~~-----~--g~~r---~d~~~~n~~~~~~i~~~i~~~~-p~a~viv~tNPv~~~~~~~~~~~~~~~~  178 (354)
                      ..|++|+.||....     +  ..+.   ...+.-|+.....+++.+...- ..+.|+++|......            +
T Consensus        88 ~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~Iv~iss~~~~~------------~  155 (272)
T PRK08159         88 KLDFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMTDGGSILTLTYYGAEK------------V  155 (272)
T ss_pred             CCcEEEECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcCCCceEEEEecccccc------------C
Confidence            68999999986421     1  1222   2344556654445554443322 246666665322111            2


Q ss_pred             CCCCCEEEeccchHHHHHHHHHHHhCCCCCCCcceEE
Q 018512          179 YDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVV  215 (354)
Q Consensus       179 ~p~~kviG~t~ld~~r~~~~la~~l~v~~~~v~~~v~  215 (354)
                      .|..-.++.+.-....+.+.++..+.  +..|++..+
T Consensus       156 ~p~~~~Y~asKaal~~l~~~la~el~--~~gIrVn~v  190 (272)
T PRK08159        156 MPHYNVMGVAKAALEASVKYLAVDLG--PKNIRVNAI  190 (272)
T ss_pred             CCcchhhhhHHHHHHHHHHHHHHHhc--ccCeEEEEe
Confidence            33333455554445566677777764  444544333

>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional

Probab=95.08  E-value=0.96  Score=41.70  Aligned_cols=148  Identities=13%  Similarity=0.092  Sum_probs=75.1

Q ss_pred             CeEEEEcCC--CchHHHHHHHHHhCCCCcEEEEEecCC-chhHHHHHhcCCCCCeEEEE-eCCCc---H-------Hhhh
Q 018512           43 FKVAILGAA--GGIGQPLAMLMKINPLVSVLHLYDVVN-TPGVTADISHMDTGAVVRGF-LGQPQ---L-------ENAL  108 (354)
Q Consensus        43 ~kI~IiGa~--G~vG~~~a~~l~~~~~~~ei~L~D~~~-~~g~~~dl~~~~~~~~v~~~-~~~~d---~-------~~al  108 (354)
                      +.+.|+||+  +.+|..++..|+..|.  .|++.+++. ......++.+......+..+ .+-+|   .       .+.+
T Consensus         8 k~~lItGa~~s~GIG~aia~~la~~G~--~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~   85 (257)
T PRK08594          8 KTYVVMGVANKRSIAWGIARSLHNAGA--KLVFTYAGERLEKEVRELADTLEGQESLLLPCDVTSDEEITACFETIKEEV   85 (257)
T ss_pred             CEEEEECCCCCCCHHHHHHHHHHHCCC--EEEEecCcccchHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHHHHHhC
Confidence            478999996  6899999999999987  888887653 11111222211001111111 01111   1       1223


Q ss_pred             CCCcEEEEcCCCCCC---C----CCCHHH---HHHHHHHHHHHHHHHHhhh-CCCeEEEEecCCCCCchHHHHHHHHHhC
Q 018512          109 TGMDLVIIPAGVPRK---P----GMTRDD---LFNINAGIVRTLCEGIAKC-CPNATVNLISNPVNSTVPIAAEVFKKAG  177 (354)
Q Consensus       109 ~~aDvVIi~ag~~~~---~----g~~r~d---~~~~n~~~~~~i~~~i~~~-~p~a~viv~tNPv~~~~~~~~~~~~~~~  177 (354)
                      ...|++|+.+|....   .    ..+..+   .+.-|+.....+.+.+..+ .+.+.|+++|.-....            
T Consensus        86 g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~------------  153 (257)
T PRK08594         86 GVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTEGGSIVTLTYLGGER------------  153 (257)
T ss_pred             CCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhcccCceEEEEcccCCcc------------
Confidence            558999999886421   1    122222   2233444333333333322 1356777776433221            


Q ss_pred             CCCCCCEEEeccchHHHHHHHHHHHhC
Q 018512          178 TYDPKKLLGVTMLDVVRANTFVAEVLG  204 (354)
Q Consensus       178 ~~p~~kviG~t~ld~~r~~~~la~~l~  204 (354)
                      +.|..-.++.+...-..|.+.+|..+.
T Consensus       154 ~~~~~~~Y~asKaal~~l~~~la~el~  180 (257)
T PRK08594        154 VVQNYNVMGVAKASLEASVKYLANDLG  180 (257)
T ss_pred             CCCCCchhHHHHHHHHHHHHHHHHHhh
Confidence            122222345554444566777777664

>PRK13529 malate dehydrogenase; Provisional

Probab=95.06  E-value=0.22  Score=51.25  Aligned_cols=125  Identities=18%  Similarity=0.264  Sum_probs=79.9

Q ss_pred             CCCeEEEEcCCCchHHHHHHHHHh----CCCC-----cEEEEEecCC--ch------hHHHHHhcCCCCCeEEEE---eC
Q 018512           41 AGFKVAILGAAGGIGQPLAMLMKI----NPLV-----SVLHLYDVVN--TP------GVTADISHMDTGAVVRGF---LG  100 (354)
Q Consensus        41 ~~~kI~IiGa~G~vG~~~a~~l~~----~~~~-----~ei~L~D~~~--~~------g~~~dl~~~~~~~~v~~~---~~  100 (354)
                      ...||++.|| |..|..+|.+|+.    .|+.     ..++++|.+.  ..      .....+.+..  ......   ..
T Consensus       294 ~d~riv~~GA-GsAgiGia~ll~~~~~~~Gl~~eeA~~~i~~vD~~GLl~~~r~~l~~~k~~fa~~~--~~~~~~~~~~~  370 (563)
T PRK13529        294 SDQRIVFLGA-GSAGCGIADQIVAAMVREGLSEEEARKRFFMVDRQGLLTDDMPDLLDFQKPYARKR--EELADWDTEGD  370 (563)
T ss_pred             hhcEEEEECC-CHHHHHHHHHHHHHHHHcCCChhHhcCeEEEEcCCCeEeCCCCcchHHHHHHhhhc--ccccccccccC
Confidence            3469999999 9999999988875    4653     5899999875  11      1111122211  111000   11


Q ss_pred             CCcHHhhhCCC--cEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCC--CchHHHHHHHHHh
Q 018512          101 QPQLENALTGM--DLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVN--STVPIAAEVFKKA  176 (354)
Q Consensus       101 ~~d~~~al~~a--DvVIi~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv~--~~~~~~~~~~~~~  176 (354)
                      ..++.++++++  |++|=+.+.+.              -+.+++++.|.+++++.+|+-.|||..  -.++   +-..+.
T Consensus       371 ~~~L~e~v~~~kPtvLIG~S~~~g--------------~Ft~evv~~Ma~~~erPIIFaLSNPt~~aE~tp---e~a~~~  433 (563)
T PRK13529        371 VISLLEVVRNVKPTVLIGVSGQPG--------------AFTEEIVKEMAAHCERPIIFPLSNPTSRAEATP---EDLIAW  433 (563)
T ss_pred             CCCHHHHHhccCCCEEEEecCCCC--------------CCCHHHHHHHHhcCCCCEEEECCCcCCCcccCH---HHHHHh
Confidence            24789999999  99887655442              144678889999999999999999987  4443   222332


Q ss_pred             CCCCCCCEEEe
Q 018512          177 GTYDPKKLLGV  187 (354)
Q Consensus       177 ~~~p~~kviG~  187 (354)
                      +  ..+-+++.
T Consensus       434 T--~Grai~At  442 (563)
T PRK13529        434 T--DGRALVAT  442 (563)
T ss_pred             h--cCCEEEEE
Confidence            2  12457777

>PRK05600 thiamine biosynthesis protein ThiF; Validated

Probab=95.03  E-value=0.13  Score=50.68  Aligned_cols=36  Identities=25%  Similarity=0.393  Sum_probs=31.5

Q ss_pred             CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC
Q 018512           41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   78 (354)
Q Consensus        41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~   78 (354)
                      +..||+|+|+ |.+|+.++..|+..|.. +|+++|.+.
T Consensus        40 ~~~~VliiG~-GglG~~v~~~La~~Gvg-~i~ivD~D~   75 (370)
T PRK05600         40 HNARVLVIGA-GGLGCPAMQSLASAGVG-TITLIDDDT   75 (370)
T ss_pred             cCCcEEEECC-CHHHHHHHHHHHHcCCC-EEEEEeCCE
Confidence            3458999999 99999999999998864 899999884

>COG0686 Ald Alanine dehydrogenase [Amino acid transport and metabolism]

Probab=94.99  E-value=0.072  Score=50.65  Aligned_cols=104  Identities=25%  Similarity=0.262  Sum_probs=65.0

Q ss_pred             chhHHHHHHHHHHhccCCCcccchhhhhhhhcccC------CCCCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEec
Q 018512            3 FSSEANQRIARISAHLYPPNLQENSCLRQAKCRAK------GGAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDV   76 (354)
Q Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~   76 (354)
                      -||+-+.|++...+..|         ..+.|...-      .+-++-||+|||+ |.+|.+-|....  ++..+|..+|.
T Consensus       132 PMSeVAGrla~q~Ga~~---------lek~~GG~GvllgGvpGV~~~kv~iiGG-GvvgtnaAkiA~--glgA~Vtild~  199 (371)
T COG0686         132 PMSEVAGRLAAQAGAYY---------LEKTNGGKGVLLGGVPGVLPAKVVVLGG-GVVGTNAAKIAI--GLGADVTILDL  199 (371)
T ss_pred             hHHHHhhhHHHHHHHHH---------HHhccCCceeEecCCCCCCCccEEEECC-ccccchHHHHHh--ccCCeeEEEec
Confidence            47788888777666553         222222221      2556679999999 999999887666  44448999999


Q ss_pred             CCchhHHHHHhcCCCCCeEEE-EeCCCcHHhhhCCCcEEEEcCCCC
Q 018512           77 VNTPGVTADISHMDTGAVVRG-FLGQPQLENALTGMDLVIIPAGVP  121 (354)
Q Consensus        77 ~~~~g~~~dl~~~~~~~~v~~-~~~~~d~~~al~~aDvVIi~ag~~  121 (354)
                      +..+-..+|-.   +..++.. .+...+++++++.+|+||-+.-.|
T Consensus       200 n~~rl~~ldd~---f~~rv~~~~st~~~iee~v~~aDlvIgaVLIp  242 (371)
T COG0686         200 NIDRLRQLDDL---FGGRVHTLYSTPSNIEEAVKKADLVIGAVLIP  242 (371)
T ss_pred             CHHHHhhhhHh---hCceeEEEEcCHHHHHHHhhhccEEEEEEEec
Confidence            85221112111   1233333 223357889999999999864333

>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=94.98  E-value=0.23  Score=50.35  Aligned_cols=124  Identities=15%  Similarity=0.116  Sum_probs=67.1

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc-h--hHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcC
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT-P--GVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA  118 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~-~--g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~a  118 (354)
                      ..+|+|+|+ |.+|..+|..|...|.  +|+++|..+. .  .....+....    +....++ .. +...++|+||++.
T Consensus        16 ~~~v~viG~-G~~G~~~A~~L~~~G~--~V~~~d~~~~~~~~~~~~~l~~~g----v~~~~~~-~~-~~~~~~D~Vv~s~   86 (480)
T PRK01438         16 GLRVVVAGL-GVSGFAAADALLELGA--RVTVVDDGDDERHRALAAILEALG----ATVRLGP-GP-TLPEDTDLVVTSP   86 (480)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCC--EEEEEeCCchhhhHHHHHHHHHcC----CEEEECC-Cc-cccCCCCEEEECC
Confidence            348999999 9999999999988887  8999997651 1  1122243322    2222222 11 2356799999998


Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHH--HHHHHhhhCCCeEEEEecCCCC--CchHHHHHHHHH
Q 018512          119 GVPRKPGMTRDDLFNINAGIVRT--LCEGIAKCCPNATVNLISNPVN--STVPIAAEVFKK  175 (354)
Q Consensus       119 g~~~~~g~~r~d~~~~n~~~~~~--i~~~i~~~~p~a~viv~tNPv~--~~~~~~~~~~~~  175 (354)
                      |.+..... .......+++++.+  ++-.+.+...+..+|-+|=..+  ..+.+++.++..
T Consensus        87 Gi~~~~~~-~~~a~~~gi~v~~~~e~~~~~~~~~~~~~~I~VTGTnGKTTTt~mi~~iL~~  146 (480)
T PRK01438         87 GWRPDAPL-LAAAADAGIPVWGEVELAWRLRDPDRPAPWLAVTGTNGKTTTVQMLASMLRA  146 (480)
T ss_pred             CcCCCCHH-HHHHHHCCCeecchHHHHHHhhhccCCCCEEEEeCCCcHHHHHHHHHHHHHH
Confidence            87643211 01112234444432  2222221112334566654444  455555555544

>PRK15116 sulfur acceptor protein CsdL; Provisional

Probab=94.94  E-value=0.3  Score=45.94  Aligned_cols=36  Identities=22%  Similarity=0.382  Sum_probs=31.4

Q ss_pred             CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC
Q 018512           41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   78 (354)
Q Consensus        41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~   78 (354)
                      +..+|+|+|+ |.||+.++..|+..|.. +|.|+|.+.
T Consensus        29 ~~s~VlVvG~-GGVGs~vae~Lar~GVg-~itLiD~D~   64 (268)
T PRK15116         29 ADAHICVVGI-GGVGSWAAEALARTGIG-AITLIDMDD   64 (268)
T ss_pred             cCCCEEEECc-CHHHHHHHHHHHHcCCC-EEEEEeCCE
Confidence            3448999999 99999999999999864 899999874

>PRK08762 molybdopterin biosynthesis protein MoeB; Validated

Probab=94.92  E-value=0.17  Score=49.95  Aligned_cols=35  Identities=29%  Similarity=0.495  Sum_probs=31.1

Q ss_pred             CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecC
Q 018512           41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVV   77 (354)
Q Consensus        41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~   77 (354)
                      +..||+|+|+ |.+|+.++..|+..|.. +|.|+|.+
T Consensus       134 ~~~~VlvvG~-GG~Gs~ia~~La~~Gvg-~i~lvD~d  168 (376)
T PRK08762        134 LEARVLLIGA-GGLGSPAALYLAAAGVG-TLGIVDHD  168 (376)
T ss_pred             hcCcEEEECC-CHHHHHHHHHHHHcCCC-eEEEEeCC
Confidence            3458999999 99999999999998864 89999997

>PRK06199 ornithine cyclodeaminase; Validated

Probab=94.92  E-value=0.14  Score=50.64  Aligned_cols=76  Identities=14%  Similarity=0.173  Sum_probs=52.9

Q ss_pred             CCCCCeEEEEcCCCchHHHHHHHHHh-CCCCcEEEEEecCC--chhHHHHHhcCC-CCCeEEEEeCCCcHHhhhCCCcEE
Q 018512           39 GAAGFKVAILGAAGGIGQPLAMLMKI-NPLVSVLHLYDVVN--TPGVTADISHMD-TGAVVRGFLGQPQLENALTGMDLV  114 (354)
Q Consensus        39 ~~~~~kI~IiGa~G~vG~~~a~~l~~-~~~~~ei~L~D~~~--~~g~~~dl~~~~-~~~~v~~~~~~~d~~~al~~aDvV  114 (354)
                      +.....++|||+ |..+..-+..++. .+.+.+|.++|+++  +...+.++.+.. ....+...   .+.++++++||+|
T Consensus       152 r~da~~l~iiG~-G~QA~~~l~a~~~v~~~i~~V~v~~r~~~~a~~f~~~~~~~~~~~~~v~~~---~s~~eav~~ADIV  227 (379)
T PRK06199        152 RKDSKVVGLLGP-GVMGKTILAAFMAVCPGIDTIKIKGRGQKSLDSFATWVAETYPQITNVEVV---DSIEEVVRGSDIV  227 (379)
T ss_pred             cCCCCEEEEECC-cHHHHHHHHHHHHhcCCccEEEEECCCHHHHHHHHHHHHHhcCCCceEEEe---CCHHHHHcCCCEE
Confidence            555679999999 9888887777665 33467999999987  344455555431 11134432   4678999999999


Q ss_pred             EEcC
Q 018512          115 IIPA  118 (354)
Q Consensus       115 Ii~a  118 (354)
                      +.+.
T Consensus       228 vtaT  231 (379)
T PRK06199        228 TYCN  231 (379)
T ss_pred             EEcc
Confidence            9754

>cd01491 Ube1_repeat1 Ubiquitin activating enzyme (E1), repeat 1

Probab=94.92  E-value=0.23  Score=47.15  Aligned_cols=75  Identities=19%  Similarity=0.226  Sum_probs=50.2

Q ss_pred             CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc-h--------------------hHHHHHhcCCCCCeEEEEe
Q 018512           41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT-P--------------------GVTADISHMDTGAVVRGFL   99 (354)
Q Consensus        41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~-~--------------------g~~~dl~~~~~~~~v~~~~   99 (354)
                      ...||.|+|+ |.+|..+|..|+..|.. .|.|+|.+.. .                    .....|........+....
T Consensus        18 ~~s~VLIvG~-gGLG~EiaKnLalaGVg-~itI~D~d~ve~snL~rqf~~~~~dIGk~Kaea~~~~L~eLNp~V~V~~~~   95 (286)
T cd01491          18 QKSNVLISGL-GGLGVEIAKNLILAGVK-SVTLHDTKPCSWSDLSSQFYLREEDIGKNRAEASQARLAELNPYVPVTVST   95 (286)
T ss_pred             hcCcEEEEcC-CHHHHHHHHHHHHcCCC-eEEEEcCCccchhhcccCccCChHHhCHHHHHHHHHHHHHHCCCCEEEEEe
Confidence            3458999999 99999999999999974 8999998750 0                    0111233332234444443


Q ss_pred             CCCcHHhhhCCCcEEEEcC
Q 018512          100 GQPQLENALTGMDLVIIPA  118 (354)
Q Consensus       100 ~~~d~~~al~~aDvVIi~a  118 (354)
                      ...+ ++-+.+.|+||.+.
T Consensus        96 ~~~~-~~~l~~fdvVV~~~  113 (286)
T cd01491          96 GPLT-TDELLKFQVVVLTD  113 (286)
T ss_pred             ccCC-HHHHhcCCEEEEec
Confidence            2223 46789999998873

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Ubiquitin-E1 is a single-chain protein with a weakly conserved two-fold repeat. This CD represents the first repeat of Ub-E1.

>PLN03129 NADP-dependent malic enzyme; Provisional

Probab=94.91  E-value=0.23  Score=51.29  Aligned_cols=104  Identities=19%  Similarity=0.240  Sum_probs=69.9

Q ss_pred             CCCeEEEEcCCCchHHHHHHHHHh-----CCC-----CcEEEEEecCC--chhHHHHHhcCC--CCCeEEEEeCCCcHHh
Q 018512           41 AGFKVAILGAAGGIGQPLAMLMKI-----NPL-----VSVLHLYDVVN--TPGVTADISHMD--TGAVVRGFLGQPQLEN  106 (354)
Q Consensus        41 ~~~kI~IiGa~G~vG~~~a~~l~~-----~~~-----~~ei~L~D~~~--~~g~~~dl~~~~--~~~~v~~~~~~~d~~~  106 (354)
                      +..||++.|| |..|..++.+|+.     .|+     ...++++|.+.  ..+...+|.+..  +.....   ...++.+
T Consensus       320 ~d~riv~~GA-GsAgigia~ll~~~~~~~~Gls~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~fa~~~~---~~~~L~e  395 (581)
T PLN03129        320 ADQRILFAGA-GEAGTGIAELIALAMSRQTGISEEEARKRIWLVDSKGLVTKSRKDSLQPFKKPFAHDHE---PGASLLE  395 (581)
T ss_pred             hhceEEEECC-CHHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEcCCCeEeCCCCccChHHHHHHHhhcc---cCCCHHH
Confidence            3579999999 9999999988765     354     25899999875  111100011100  000011   1257899


Q ss_pred             hhCC--CcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCC
Q 018512          107 ALTG--MDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPV  162 (354)
Q Consensus       107 al~~--aDvVIi~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv  162 (354)
                      ++++  +|++|=+.+.+..              +.+++++.|.+++++.+|+-.|||.
T Consensus       396 ~v~~vkptvLIG~S~~~g~--------------Ft~evi~~Ma~~~~rPIIFaLSNPt  439 (581)
T PLN03129        396 AVKAIKPTVLIGLSGVGGT--------------FTKEVLEAMASLNERPIIFALSNPT  439 (581)
T ss_pred             HHhccCCCEEEEecCCCCC--------------CCHHHHHHHHhcCCCCEEEECCCCC
Confidence            9999  8998877554421              4457888898999999999999998

>PRK06436 glycerate dehydrogenase; Provisional

Probab=94.90  E-value=0.13  Score=49.24  Aligned_cols=95  Identities=20%  Similarity=0.298  Sum_probs=60.5

Q ss_pred             CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcCCC
Q 018512           41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGV  120 (354)
Q Consensus        41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~ag~  120 (354)
                      ..++|.|+|- |.+|+.+|..+..-|.  +|+.+|+....        ..    ....  ..++++.++.||+|++....
T Consensus       121 ~gktvgIiG~-G~IG~~vA~~l~afG~--~V~~~~r~~~~--------~~----~~~~--~~~l~ell~~aDiv~~~lp~  183 (303)
T PRK06436        121 YNKSLGILGY-GGIGRRVALLAKAFGM--NIYAYTRSYVN--------DG----ISSI--YMEPEDIMKKSDFVLISLPL  183 (303)
T ss_pred             CCCEEEEECc-CHHHHHHHHHHHHCCC--EEEEECCCCcc--------cC----cccc--cCCHHHHHhhCCEEEECCCC
Confidence            4579999999 9999999987765566  99999985311        01    0000  13578889999999997432


Q ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec--CCCCCc
Q 018512          121 PRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS--NPVNST  165 (354)
Q Consensus       121 ~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~t--NPv~~~  165 (354)
                      ..   +++        .++-  .+.+....|.+++|+++  .++|.-
T Consensus       184 t~---~T~--------~li~--~~~l~~mk~ga~lIN~sRG~~vd~~  217 (303)
T PRK06436        184 TD---ETR--------GMIN--SKMLSLFRKGLAIINVARADVVDKN  217 (303)
T ss_pred             Cc---hhh--------cCcC--HHHHhcCCCCeEEEECCCccccCHH
Confidence            11   011        1110  22333335789999986  566654

>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=94.88  E-value=0.84  Score=41.75  Aligned_cols=34  Identities=15%  Similarity=0.160  Sum_probs=29.2

Q ss_pred             CCeEEEEcCCC--chHHHHHHHHHhCCCCcEEEEEecC
Q 018512           42 GFKVAILGAAG--GIGQPLAMLMKINPLVSVLHLYDVV   77 (354)
Q Consensus        42 ~~kI~IiGa~G--~vG~~~a~~l~~~~~~~ei~L~D~~   77 (354)
                      .++|.|+||+|  .+|..++..|+..|.  +|++++++
T Consensus         5 ~k~vlItGas~~~giG~~la~~l~~~G~--~vi~~~r~   40 (256)
T PRK12748          5 KKIALVTGASRLNGIGAAVCRRLAAKGI--DIFFTYWS   40 (256)
T ss_pred             CcEEEEeCCCCCCCHHHHHHHHHHHcCC--cEEEEcCC
Confidence            35799999974  699999999999887  88999876

>COG2344 AT-rich DNA-binding protein [General function prediction only]

Probab=94.87  E-value=0.17  Score=44.77  Aligned_cols=101  Identities=18%  Similarity=0.279  Sum_probs=65.2

Q ss_pred             CCCCCCeEEEEcCCCchHHHHHH-HHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhC--CCcEE
Q 018512           38 GGAAGFKVAILGAAGGIGQPLAM-LMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALT--GMDLV  114 (354)
Q Consensus        38 ~~~~~~kI~IiGa~G~vG~~~a~-~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~--~aDvV  114 (354)
                      +..+..+|.|||+ |++|.+++. .+..+.-..-+..+|+++.  .   .........++..   ++++.-++  +.|+.
T Consensus        80 g~~~~tnviiVG~-GnlG~All~Y~f~~~~~~~iv~~FDv~~~--~---VG~~~~~v~V~~~---d~le~~v~~~dv~ia  150 (211)
T COG2344          80 GQDKTTNVIIVGV-GNLGRALLNYNFSKKNGMKIVAAFDVDPD--K---VGTKIGDVPVYDL---DDLEKFVKKNDVEIA  150 (211)
T ss_pred             CCCcceeEEEEcc-ChHHHHHhcCcchhhcCceEEEEecCCHH--H---hCcccCCeeeech---HHHHHHHHhcCccEE
Confidence            4566789999999 999999986 4444444556788999862  1   1111111223322   35555555  88999


Q ss_pred             EEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCCc
Q 018512          115 IIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNST  165 (354)
Q Consensus       115 Ii~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv~~~  165 (354)
                      |+|.  |              ....+++++.+-+.+-+++ +++| |+.+.
T Consensus       151 iLtV--P--------------a~~AQ~vad~Lv~aGVkGI-lNFt-Pv~l~  183 (211)
T COG2344         151 ILTV--P--------------AEHAQEVADRLVKAGVKGI-LNFT-PVRLQ  183 (211)
T ss_pred             EEEc--c--------------HHHHHHHHHHHHHcCCceE-Eecc-ceEec
Confidence            9984  2              2355688888888888883 5666 66655

>PRK05597 molybdopterin biosynthesis protein MoeB; Validated

Probab=94.86  E-value=0.21  Score=48.93  Aligned_cols=35  Identities=29%  Similarity=0.468  Sum_probs=31.1

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   78 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~   78 (354)
                      ..||+|+|+ |.+|+.++..|+..|.. ++.++|.+.
T Consensus        28 ~~~VlivG~-GGlGs~~a~~La~~Gvg-~i~lvD~D~   62 (355)
T PRK05597         28 DAKVAVIGA-GGLGSPALLYLAGAGVG-HITIIDDDT   62 (355)
T ss_pred             CCeEEEECC-CHHHHHHHHHHHHcCCC-eEEEEeCCE
Confidence            348999999 99999999999998874 899999875

>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.85  E-value=0.098  Score=49.59  Aligned_cols=58  Identities=19%  Similarity=0.381  Sum_probs=44.4

Q ss_pred             CCCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcC
Q 018512           39 GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA  118 (354)
Q Consensus        39 ~~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~a  118 (354)
                      .-+..+|+|+|++|.+|..++..|+..+.  +|.+++..                       +.++.+.+++||+||.+.
T Consensus       156 ~l~Gk~vvViG~gg~vGkpia~~L~~~ga--tVtv~~~~-----------------------t~~L~~~~~~aDIvI~At  210 (283)
T PRK14192        156 ELAGKHAVVVGRSAILGKPMAMMLLNANA--TVTICHSR-----------------------TQNLPELVKQADIIVGAV  210 (283)
T ss_pred             CCCCCEEEEECCcHHHHHHHHHHHHhCCC--EEEEEeCC-----------------------chhHHHHhccCCEEEEcc
Confidence            34556999999944599999999988876  88888752                       124556679999999988


Q ss_pred             CCC
Q 018512          119 GVP  121 (354)
Q Consensus       119 g~~  121 (354)
                      |.|
T Consensus       211 G~~  213 (283)
T PRK14192        211 GKP  213 (283)
T ss_pred             CCC
Confidence            644

>COG0289 DapB Dihydrodipicolinate reductase [Amino acid transport and metabolism]

Probab=94.82  E-value=0.22  Score=46.38  Aligned_cols=75  Identities=19%  Similarity=0.189  Sum_probs=45.3

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEc
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIP  117 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~  117 (354)
                      +|||+|.||+|.+|+.++..+.+.+...=+..+|.......-.|.........+... .+.|+.....++|++|=.
T Consensus         2 ~iki~V~Ga~GRMG~~ii~~v~~~~~~~L~aa~~~~~~~~~g~d~ge~~g~~~~gv~-v~~~~~~~~~~~DV~IDF   76 (266)
T COG0289           2 MIKVAVAGASGRMGRTLIRAVLEAPDLELVAAFDRPGSLSLGSDAGELAGLGLLGVP-VTDDLLLVKADADVLIDF   76 (266)
T ss_pred             CceEEEEcCCChHHHHHHHHHhcCCCceEEEEEecCCccccccchhhhccccccCce-eecchhhcccCCCEEEEC
Confidence            689999999999999999999887744345667776411111122222111111111 123455677899988864

>PRK11889 flhF flagellar biosynthesis regulator FlhF; Provisional

Probab=94.82  E-value=0.74  Score=45.76  Aligned_cols=135  Identities=16%  Similarity=0.220  Sum_probs=70.0

Q ss_pred             CCCeEEEEcCCCchHHHHHH-----HHHhCCCCcEEEEEecCC-chhHHHHHhcCC--CCCeEEEEeCCCcHHhhh---C
Q 018512           41 AGFKVAILGAAGGIGQPLAM-----LMKINPLVSVLHLYDVVN-TPGVTADISHMD--TGAVVRGFLGQPQLENAL---T  109 (354)
Q Consensus        41 ~~~kI~IiGa~G~vG~~~a~-----~l~~~~~~~ei~L~D~~~-~~g~~~dl~~~~--~~~~v~~~~~~~d~~~al---~  109 (354)
                      ++.+|+++|- +-+|-+...     .+...+.  .+.++|.|. ..+-...|....  ....+.......++.+++   +
T Consensus       240 ~~~vI~LVGp-tGvGKTTTiaKLA~~L~~~Gk--kVglI~aDt~RiaAvEQLk~yae~lgipv~v~~d~~~L~~aL~~lk  316 (436)
T PRK11889        240 EVQTIALIGP-TGVGKTTTLAKMAWQFHGKKK--TVGFITTDHSRIGTVQQLQDYVKTIGFEVIAVRDEAAMTRALTYFK  316 (436)
T ss_pred             CCcEEEEECC-CCCcHHHHHHHHHHHHHHcCC--cEEEEecCCcchHHHHHHHHHhhhcCCcEEecCCHHHHHHHHHHHH
Confidence            3568999998 667766532     2333444  788899886 323333333211  112222211223344444   2


Q ss_pred             ---CCcEEEE-cCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCCchHHHHHHHHHhCCCCCCCEE
Q 018512          110 ---GMDLVII-PAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLL  185 (354)
Q Consensus       110 ---~aDvVIi-~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~~~~~~~~~~p~~kvi  185 (354)
                         +.|+||+ ++|...           .+...+.++.+.++...|+..+++++-....-  -+.+++..+..++...+|
T Consensus       317 ~~~~~DvVLIDTaGRs~-----------kd~~lm~EL~~~lk~~~PdevlLVLsATtk~~--d~~~i~~~F~~~~idglI  383 (436)
T PRK11889        317 EEARVDYILIDTAGKNY-----------RASETVEEMIETMGQVEPDYICLTLSASMKSK--DMIEIITNFKDIHIDGIV  383 (436)
T ss_pred             hccCCCEEEEeCccccC-----------cCHHHHHHHHHHHhhcCCCeEEEEECCccChH--HHHHHHHHhcCCCCCEEE
Confidence               5799999 665432           23345666666666667887766654211111  111334444445544444


Q ss_pred             EeccchH
Q 018512          186 GVTMLDV  192 (354)
Q Consensus       186 G~t~ld~  192 (354)
                       +|.+|+
T Consensus       384 -~TKLDE  389 (436)
T PRK11889        384 -FTKFDE  389 (436)
T ss_pred             -EEcccC
Confidence             466665

>PRK06728 aspartate-semialdehyde dehydrogenase; Provisional

Probab=94.80  E-value=0.065  Score=52.18  Aligned_cols=72  Identities=24%  Similarity=0.472  Sum_probs=46.6

Q ss_pred             CCCeEEEEcCCCchHHHHHHHHHhCC-C-CcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcC
Q 018512           41 AGFKVAILGAAGGIGQPLAMLMKINP-L-VSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA  118 (354)
Q Consensus        41 ~~~kI~IiGa~G~vG~~~a~~l~~~~-~-~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~a  118 (354)
                      +.+||+|+||+|.+|..+...|...+ . ..+|.++......|....+..    ..+...  ..+ .+.++++|+||+++
T Consensus         4 ~~~~VaIvGATG~vG~ell~lL~~h~~f~v~~l~~~aS~~saGk~~~~~~----~~l~v~--~~~-~~~~~~~Divf~a~   76 (347)
T PRK06728          4 KGYHVAVVGATGAVGQKIIELLEKETKFNIAEVTLLSSKRSAGKTVQFKG----REIIIQ--EAK-INSFEGVDIAFFSA   76 (347)
T ss_pred             CCCEEEEEeCCCHHHHHHHHHHHHCCCCCcccEEEEECcccCCCCeeeCC----cceEEE--eCC-HHHhcCCCEEEECC
Confidence            34799999999999999999998544 3 345888876543333222211    123322  123 35678999999976


Q ss_pred             C
Q 018512          119 G  119 (354)
Q Consensus       119 g  119 (354)
                      +
T Consensus        77 ~   77 (347)
T PRK06728         77 G   77 (347)
T ss_pred             C
Confidence            4

>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B

Probab=94.79  E-value=0.18  Score=40.12  Aligned_cols=63  Identities=19%  Similarity=0.182  Sum_probs=43.4

Q ss_pred             CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcC
Q 018512           41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA  118 (354)
Q Consensus        41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~a  118 (354)
                      +..+|.|||+ |.+|..-+..|+..|.  +|.++....     .....   ...+..    ..+++.+.++|+||.+.
T Consensus         6 ~~~~vlVvGg-G~va~~k~~~Ll~~gA--~v~vis~~~-----~~~~~---~i~~~~----~~~~~~l~~~~lV~~at   68 (103)
T PF13241_consen    6 KGKRVLVVGG-GPVAARKARLLLEAGA--KVTVISPEI-----EFSEG---LIQLIR----REFEEDLDGADLVFAAT   68 (103)
T ss_dssp             TT-EEEEEEE-SHHHHHHHHHHCCCTB--EEEEEESSE-----HHHHT---SCEEEE----SS-GGGCTTESEEEE-S
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCC--EEEEECCch-----hhhhh---HHHHHh----hhHHHHHhhheEEEecC
Confidence            3459999999 9999999999998886  999999863     11111   112221    23457799999999874

>PLN00203 glutamyl-tRNA reductase

Probab=94.77  E-value=0.25  Score=50.84  Aligned_cols=120  Identities=13%  Similarity=0.145  Sum_probs=71.1

Q ss_pred             CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchh--HHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcC
Q 018512           41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPG--VTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA  118 (354)
Q Consensus        41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g--~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~a  118 (354)
                      ...+|+|||+ |.+|..++..|...|. .+|++++++....  ....+.  .  ..+... ...++.+++.++|+||.+.
T Consensus       265 ~~kkVlVIGA-G~mG~~~a~~L~~~G~-~~V~V~nRs~era~~La~~~~--g--~~i~~~-~~~dl~~al~~aDVVIsAT  337 (519)
T PLN00203        265 ASARVLVIGA-GKMGKLLVKHLVSKGC-TKMVVVNRSEERVAALREEFP--D--VEIIYK-PLDEMLACAAEADVVFTST  337 (519)
T ss_pred             CCCEEEEEeC-HHHHHHHHHHHHhCCC-CeEEEEeCCHHHHHHHHHHhC--C--CceEee-cHhhHHHHHhcCCEEEEcc
Confidence            3569999999 9999999999888774 4799999875222  222221  1  112221 1235678899999999875


Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHHHHhhh----CCCeEEEEecCCCCCchHHHHHHHHHhCCCCCCCEEEec
Q 018512          119 GVPRKPGMTRDDLFNINAGIVRTLCEGIAKC----CPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVT  188 (354)
Q Consensus       119 g~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~----~p~a~viv~tNPv~~~~~~~~~~~~~~~~~p~~kviG~t  188 (354)
                      +.+.. =            +..+.++.+.+.    ...-++|=.+.|=|+-..        ...+|.-.++-+-
T Consensus       338 ~s~~p-v------------I~~e~l~~~~~~~~~~~~~~~~IDLAvPRdIdp~--------v~~l~~v~lydiD  390 (519)
T PLN00203        338 SSETP-L------------FLKEHVEALPPASDTVGGKRLFVDISVPRNVGAC--------VSELESARVYNVD  390 (519)
T ss_pred             CCCCC-e------------eCHHHHHHhhhcccccCCCeEEEEeCCCCCCccc--------cccCCCCeEEEec
Confidence            43321 0            122333333211    112366778999877632        2245655666664

>COG0002 ArgC Acetylglutamate semialdehyde dehydrogenase [Amino acid transport and metabolism]

Probab=94.73  E-value=0.073  Score=51.35  Aligned_cols=73  Identities=26%  Similarity=0.220  Sum_probs=46.5

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCC--CCeEEEEeCCCcHHh-hhCCCcEEEEc
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDT--GAVVRGFLGQPQLEN-ALTGMDLVIIP  117 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~--~~~v~~~~~~~d~~~-al~~aDvVIi~  117 (354)
                      ++||+|+||+|+.|..+..+|...+.. |+.++...+..|....-.+...  ...++..  ..|.++ ...+||+||.+
T Consensus         2 ~~kV~IvGasGYtG~EL~rlL~~Hp~v-e~~~~ss~~~~g~~~~~~~p~l~g~~~l~~~--~~~~~~~~~~~~DvvFla   77 (349)
T COG0002           2 MIKVGIVGASGYTGLELLRLLAGHPDV-ELILISSRERAGKPVSDVHPNLRGLVDLPFQ--TIDPEKIELDECDVVFLA   77 (349)
T ss_pred             CceEEEEcCCCCcHHHHHHHHhcCCCe-EEEEeechhhcCCchHHhCcccccccccccc--cCChhhhhcccCCEEEEe
Confidence            579999999999999999999888754 6888887653343332222211  1223321  112222 35669999997

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	354
1sev_A	362	Mature And Translocatable Forms Of Glyoxysomal Mala		1e-172
1smk_A	326	Mature And Translocatable Forms Of Glyoxysomal Mala		1e-160
1mld_A	314	Refined Structure Of Mitochondrial Malate Dehydroge		2e-93
2dfd_A	342	Crystal Structure Of Human Malate Dehydrogenase Typ		1e-92
2pwz_A	312	Crystal Structure Of The Apo Form Of E.Coli Malate		1e-80
1emd_A	312	Crystal Structure Of A Ternary Complex Of Escherich		2e-80
1ib6_A	312	Crystal Structure Of R153c E. Coli Malate Dehydroge		2e-79
4e0b_A	313	2.17 Angstrom Resolution Crystal Structure Of Malat		9e-79
3p7m_A	321	Structure Of Putative Lactate Dehydrogenase From Fr		3e-19
1gv1_A	310	Structural Basis For Thermophilic Protein Stability		4e-17
1guz_A	310	Structural Basis For Thermophilic Protein Stability		4e-17
3tl2_A	315	Crystal Structure Of Bacillus Anthracis Str. Ames M		2e-16
3gvh_A	324	Crystal Structure Of LactateMALATE DEHYDROGENASE FR		2e-16
1gv0_A	310	Structural Basis For Thermophilic Protein Stability		9e-15
1uxi_A	309	Large Improvement In The Thermal Stability Of A Tet		1e-14
1uxh_A	309	Large Improvement In The Thermal Stability Of A Tet		2e-14
1guy_A	309	Structural Basis For Thermophilic Protein Stability		2e-14
2hjr_A	328	Crystal Structure Of Cryptosporidium Parvum Malate		2e-14
1ur5_A	309	Stabilization Of A Tetrameric Malate Dehydrogenase		4e-14
3om9_A	329	T. Gondii Bradyzoite-Specific Ldh (Ldh1) In Complex		5e-12
1pze_A	331	T.gondii Ldh1 Apo Form Length = 331		5e-12
1pzg_A	331	T.Gondii Ldh1 Complexed With Apad And Sulfate At 1.		5e-12
1sov_A	328	Toxoplasma Gondii Bradyzoite-specific Ldh (ldh2) Ap		9e-12
3czm_A	326	T. Gondii Bradyzoite-Specific Ldh (Ldh2) In Complex		1e-11
1a5z_A	319	Lactate Dehydrogenase From Thermotoga Maritima (tml		2e-11
1t24_A	322	Plasmodium Falciparum Lactate Dehydrogenase Complex		2e-11
1u4o_A	321	Plasmodium Falciparum Lactate Dehydrogenase Complex		3e-11
1ceq_A	316	Chloroquine Binds In The Cofactor Binding Site Of P		3e-11
1xiv_A	323	Plasmodium Falciparum Lactate Dehydrogenase Complex		3e-11
3fi9_A	343	Crystal Structure Of Malate Dehydrogenase From Porp		6e-11
2d4a_A	308	Structure Of The Malate Dehydrogenase From Aeropyru		7e-11
2j5k_A	304	2.0 A Resolution Structure Of The Wild Type Malate		8e-11
1hlp_A	303	Structural Features Stabilizing Halophilic Malate D		9e-11
2hlp_A	303	Crystal Structure Of The E267r Mutant Of A Halophil		9e-11
3nep_X	314	1.55a Resolution Structure Of Malate Dehydrogenase		1e-10
2a92_A	321	Crystal Structure Of Lactate Dehydrogenase From Pla		1e-10
1y6j_A	318	L-Lactate Dehydrogenase From Clostridium Thermocell		2e-10
2ewd_A	317	Crystal Structure Of The Lactate Dehydrogenase From		3e-10
2fm3_A	321	Crystal Structure Of The Lactate Dehydrogenase From		3e-10
1hyg_A	313	Crystal Structure Of Mj0490 Gene Product, The Famil		4e-10
1oc4_A	322	Lactate Dehydrogenase From Plasmodium Berghei Lengt		5e-10
1cet_A	316	Chloroquine Binds In The Cofactor Binding Site Of P		5e-10
1o6z_A	303	1.95 A Resolution Structure Of (r207s,r292s) Mutant		1e-09
2x0r_A	304	R207s,R292s Mutant Of Malate Dehydrogenase From The		1e-09
1t2e_A	322	Plasmodium Falciparum Lactate Dehydrogenase S245a,		2e-09
2x0i_A	294	2.9 A Resolution Structure Of Malate Dehydrogenase		2e-08
4h7p_A	345	Crystal Structure Of A Putative Cytosolic Malate De		3e-07
1llc_A	325	Structure Determination Of The Allosteric L-Lactate		2e-06
2zqy_A	326	T-State Structure Of Allosteric L-Lactate Dehydroge		2e-06
3vku_A	326	Penta Mutant Of Lactobacillus Casei Lactate Dehydro		4e-06
2ldx_A	331	Characterization Of The Antigenic Sites On The Refi		6e-06
2v6b_A	304	Crystal Structure Of Lactate Dehydrogenase From Dei		1e-05
1bmd_A	327	Determinants Of Protein Thermostability Observed In		2e-05
1bdm_A	327	The Structure At 1.8 Angstroms Resolution Of A Sing		2e-05
3h3f_A	331	Rabbit Muscle L-Lactate Dehydrogenase In Complex Wi		2e-05
1lld_A	319	Molecular Basis Of Allosteric Activation Of Bacteri		2e-05
1iz9_A	327	Crystal Structure Of Malate Dehydrogenase From Ther		3e-05
1i10_A	331	Human Muscle L-Lactate Dehydrogenase M Chain, Terna		3e-05
4ajp_A	337	Human Ldha In Complex With 2-((4-(4-((3-((2-Methyl-		3e-05
1ldn_A	316	Structure Of A Ternary Complex Of An Allosteric Lac		3e-05
1ldb_A	317	Structure Determination And Refinement Of Bacillus		3e-05
1wze_A	327	Structural Basis For Alteration Of Cofactor Specifi		8e-05
2e37_A	310	Structure Of Tt0471 Protein From Thermus Thermophil		9e-05
4a73_A	310	Single Point Mutant Of Thermus Thermophilus Lactate		9e-05
9ldt_A	332	Design And Synthesis Of New Enzymes Based On The La		1e-04
2v6m_A	310	Crystal Structure Of Lactate Dehydrogenase From The		1e-04
4aj1_A	331	Rat Ldha In Complex With N-(2-(Methylamino)-1,3- Be		1e-04
4aj4_A	332	Rat Ldha In Complex With 4-((2-Allylsulfanyl-1,3-Be		1e-04
2xxb_A	310	Penta-Mutant Of Thermus Thermophilus Lactate Dehydr		3e-04
3pqd_A	326	Crystal Structure Of L-Lactate Dehydrogenase From B		4e-04
3pqe_A	326	Crystal Structure Of L-Lactate Dehydrogenase From B		4e-04
1civ_A	385	Chloroplast Nadp-Dependent Malate Dehydrogenase Fro		7e-04

>pdb|1SEV|A Chain A, Mature And Translocatable Forms Of Glyoxysomal Malate Dehydrogenase Have Different Activities And Stabilities But Similar Crystal Structures Length = 362

Iteration: 1
 Score =  600 bits (1546), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 296/355 (83%), Positives = 316/355 (89%), Gaps = 2/355 (0%)
Query: 1   MEFSSEANQRIARISAHLYPP--NLQENSCLRQAKCRAKGGAAGFKVAILGAAGGIGQPL 58
           M+   + NQRIARISAHL+PP   ++E+S LR+A CRAKGGA GFKVAILGAAGGIGQPL
Sbjct: 1   MQPIPDVNQRIARISAHLHPPKSQMEESSALRRANCRAKGGAPGFKVAILGAAGGIGQPL 60
Query: 59  AMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA 118
           AMLMK+NPLVSVLHLYDVVN PGVTADISHMDTGAVVRGFLGQ QLE ALTGMDL+I+PA
Sbjct: 61  AMLMKMNPLVSVLHLYDVVNAPGVTADISHMDTGAVVRGFLGQQQLEAALTGMDLIIVPA 120
Query: 119 GVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGT 178
           GVPRKPGMTRDDLF INAGIV+TLCEGIAKCCP A VNLISNPVNSTVPIAAEVFKKAGT
Sbjct: 121 GVPRKPGMTRDDLFKINAGIVKTLCEGIAKCCPRAIVNLISNPVNSTVPIAAEVFKKAGT 180
Query: 179 YDPKKLLGVTMLDVVRANTFVAEXXXXXXXXXXXXXXXXHAGVTILPLLSQVKPPCSFTQ 238
           YDPK+LLGVTMLDVVRANTFVAE                HAGVTILPLLSQVKPP SFTQ
Sbjct: 181 YDPKRLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPSSFTQ 240
Query: 239 EETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECAFVAS 298
           EE  YLT+RIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRGLRGDAGV+ECAFV+S
Sbjct: 241 EEISYLTDRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVIECAFVSS 300
Query: 299 QVTELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSIQKGISFSK 353
           QVTELPFFASKVRLGR G EE++ LGPLNEYERIGLEKAKKELAGSI+KG+SF +
Sbjct: 301 QVTELPFFASKVRLGRNGIEEVYSLGPLNEYERIGLEKAKKELAGSIEKGVSFIR 355

>pdb|1SMK|A Chain A, Mature And Translocatable Forms Of Glyoxysomal Malate Dehydrogenase Have Different Activities And Stabilities But Similar Crystal Structures Length = 326

Iteration: 1
 Score =  560 bits (1443), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 276/319 (86%), Positives = 289/319 (90%)
Query: 35  RAKGGAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAV 94
           RAKGGA GFKVAILGAAGGIGQPLAMLMK+NPLVSVLHLYDVVN PGVTADISHMDTGAV
Sbjct: 1   RAKGGAPGFKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNAPGVTADISHMDTGAV 60
Query: 95  VRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNAT 154
           VRGFLGQ QLE ALTGMDL+I+PAGVPRKPGMTRDDLF INAGIV+TLCEGIAKCCP A 
Sbjct: 61  VRGFLGQQQLEAALTGMDLIIVPAGVPRKPGMTRDDLFKINAGIVKTLCEGIAKCCPRAI 120
Query: 155 VNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEXXXXXXXXXXXXX 214
           VNLISNPVNSTVPIAAEVFKKAGTYDPK+LLGVTMLDVVRANTFVAE             
Sbjct: 121 VNLISNPVNSTVPIAAEVFKKAGTYDPKRLLGVTMLDVVRANTFVAEVLGLDPRDVDVPV 180
Query: 215 XXXHAGVTILPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAV 274
              HAGVTILPLLSQVKPP SFTQEE  YLT+RIQNGGTEVVEAKAGAGSATLSMAYAAV
Sbjct: 181 VGGHAGVTILPLLSQVKPPSSFTQEEISYLTDRIQNGGTEVVEAKAGAGSATLSMAYAAV 240
Query: 275 KFADACLRGLRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQLGPLNEYERIGL 334
           KFADACLRGLRGDAGV+ECAFV+SQVTELPFFASKVRLGR G EE++ LGPLNEYERIGL
Sbjct: 241 KFADACLRGLRGDAGVIECAFVSSQVTELPFFASKVRLGRNGIEEVYSLGPLNEYERIGL 300
Query: 335 EKAKKELAGSIQKGISFSK 353
           EKAKKELAGSI+KG+SF +
Sbjct: 301 EKAKKELAGSIEKGVSFIR 319

>pdb|1MLD|A Chain A, Refined Structure Of Mitochondrial Malate Dehydrogenase From Porcine Heart And The Consensus Structure For Dicarboxylic Acid Oxidoreductases Length = 314

Iteration: 1
 Score =  338 bits (868), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 170/310 (54%), Positives = 219/310 (70%)
Query: 44  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQ 103
           KVA+LGA+GGIGQPL++L+K +PLVS L LYD+ +TPGV AD+SH++T A V+G+LG  Q
Sbjct: 2   KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVAADLSHIETRATVKGYLGPEQ 61
Query: 104 LENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVN 163
           L + L G D+V+IPAGVPRKPGMTRDDLFN NA IV TL    A+ CP+A + +ISNPVN
Sbjct: 62  LPDCLKGCDVVVIPAGVPRKPGMTRDDLFNTNATIVATLTAACAQHCPDAMICIISNPVN 121
Query: 164 STVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEXXXXXXXXXXXXXXXXHAGVTI 223
           ST+PI AEVFKK G Y+P K+ GVT LD+VRAN FVAE                HAG TI
Sbjct: 122 STIPITAEVFKKHGVYNPNKIFGVTTLDIVRANAFVAELKGLDPARVSVPVIGGHAGKTI 181
Query: 224 LPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRG 283
           +PL+SQ  P   F Q++   LT RIQ  GTEVV+AKAGAGSATLSMAYA  +F  + +  
Sbjct: 182 IPLISQCTPKVDFPQDQLSTLTGRIQEAGTEVVKAKAGAGSATLSMAYAGARFVFSLVDA 241
Query: 284 LRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAG 343
           + G  GVVEC+FV SQ T+ P+F++ + LG++G E+   +G ++ +E   + +A  EL  
Sbjct: 242 MNGKEGVVECSFVKSQETDCPYFSTPLLLGKKGIEKNLGIGKISPFEEKMIAEAIPELKA 301
Query: 344 SIQKGISFSK 353
           SI+KG  F K
Sbjct: 302 SIKKGEEFVK 311

>pdb|2DFD|A Chain A, Crystal Structure Of Human Malate Dehydrogenase Type 2 Length = 342

Iteration: 1
 Score =  336 bits (862), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 170/310 (54%), Positives = 217/310 (70%)
Query: 44  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQ 103
           KVA+LGA+GGIGQPL++L+K +PLVS L LYD+ +TPGV AD+SH++T A V+G+LG  Q
Sbjct: 30  KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVAADLSHIETKAAVKGYLGPEQ 89
Query: 104 LENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVN 163
           L + L G D+V+IPAGVPRKPGMTRDDLFN NA IV TL    A+ CP A + +I+NPVN
Sbjct: 90  LPDCLKGCDVVVIPAGVPRKPGMTRDDLFNTNATIVATLTAACAQHCPEAMICVIANPVN 149
Query: 164 STVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEXXXXXXXXXXXXXXXXHAGVTI 223
           ST+PI AEVFKK G Y+P K+ GVT LD+VRANTFVAE                HAG TI
Sbjct: 150 STIPITAEVFKKHGVYNPNKIFGVTTLDIVRANTFVAELKGLDPARVNVPVIGGHAGKTI 209
Query: 224 LPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRG 283
           +PL+SQ  P   F Q++   LT RIQ  GTEVV+AKAGAGSATLSMAYA  +F  + +  
Sbjct: 210 IPLISQCTPKVDFPQDQLTALTGRIQEAGTEVVKAKAGAGSATLSMAYAGARFVFSLVDA 269
Query: 284 LRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAG 343
           + G  GVVEC+FV SQ TE  +F++ + LG++G E+   +G ++ +E   +  A  EL  
Sbjct: 270 MNGKEGVVECSFVKSQETECTYFSTPLLLGKKGIEKNLGIGKVSSFEEKMISDAIPELKA 329
Query: 344 SIQKGISFSK 353
           SI+KG  F K
Sbjct: 330 SIKKGEDFVK 339

>pdb|2PWZ|A Chain A, Crystal Structure Of The Apo Form Of E.Coli Malate Dehydrogenase Length = 312

Iteration: 1
 Score =  296 bits (758), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 165/314 (52%), Positives = 203/314 (64%), Gaps = 4/314 (1%)
Query: 43  FKVAILGAAGGIGQPLAMLMKIN-PLVSVLHLYDVVN-TPGVTADISHMDTGAVVRGFLG 100
            KVA+LGAAGGIGQ LA+L+K   P  S L LYD+   TPGV  D+SH+ T   ++GF G
Sbjct: 1   MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPVTPGVAVDLSHIPTAVKIKGFSG 60
Query: 101 QPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISN 160
           +     AL G D+V+I AGV RKPGM R DLFN+NAGIV+ L + +AK CP A + +I+N
Sbjct: 61  E-DATPALEGADVVLISAGVARKPGMDRSDLFNVNAGIVKNLVQQVAKTCPKACIGIITN 119
Query: 161 PVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEXXXXXXXXXXXXXXXXHAG 220
           PVN+TV IAAEV KKAG YD  KL GVT LD++R+NTFVAE                H+G
Sbjct: 120 PVNTTVAIAAEVLKKAGVYDKNKLFGVTTLDIIRSNTFVAELKGKQPGEVEVPVIGGHSG 179
Query: 221 VTILPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADAC 280
           VTILPLLSQV P  SFT++E   LT RIQN GTEVVEAKAG GSATLSM  AA +F  + 
Sbjct: 180 VTILPLLSQV-PGVSFTEQEVADLTKRIQNAGTEVVEAKAGGGSATLSMGQAAARFGLSL 238
Query: 281 LRGLRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKE 340
           +R L+G+ GVVECA+V        FF+  + LG+ G EE   +G L+ +E+  LE     
Sbjct: 239 VRALQGEQGVVECAYVEGDGQYARFFSQPLLLGKNGVEERKSIGTLSAFEQNALEGMLDT 298
Query: 341 LAGSIQKGISFSKK 354
           L   I  G  F  K
Sbjct: 299 LKKDIALGEEFVNK 312

>pdb|1EMD|A Chain A, Crystal Structure Of A Ternary Complex Of Escherichia Coli Malate Dehydrogenase, Citrate And Nad At 1.9 Angstroms Resolution Length = 312

Iteration: 1
 Score =  296 bits (757), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 165/314 (52%), Positives = 203/314 (64%), Gaps = 4/314 (1%)
Query: 43  FKVAILGAAGGIGQPLAMLMKIN-PLVSVLHLYDVVN-TPGVTADISHMDTGAVVRGFLG 100
            KVA+LGAAGGIGQ LA+L+K   P  S L LYD+   TPGV  D+SH+ T   ++GF G
Sbjct: 1   MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPVTPGVAVDLSHIPTAVKIKGFSG 60
Query: 101 QPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISN 160
           +     AL G D+V+I AGV RKPGM R DLFN+NAGIV+ L + +AK CP A + +I+N
Sbjct: 61  E-DATPALEGADVVLISAGVRRKPGMDRSDLFNVNAGIVKNLVQQVAKTCPKACIGIITN 119
Query: 161 PVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEXXXXXXXXXXXXXXXXHAG 220
           PVN+TV IAAEV KKAG YD  KL GVT LD++R+NTFVAE                H+G
Sbjct: 120 PVNTTVAIAAEVLKKAGVYDKNKLFGVTTLDIIRSNTFVAELKGKQPGEVEVPVIGGHSG 179
Query: 221 VTILPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADAC 280
           VTILPLLSQV P  SFT++E   LT RIQN GTEVVEAKAG GSATLSM  AA +F  + 
Sbjct: 180 VTILPLLSQV-PGVSFTEQEVADLTKRIQNAGTEVVEAKAGGGSATLSMGQAAARFGLSL 238
Query: 281 LRGLRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKE 340
           +R L+G+ GVVECA+V        FF+  + LG+ G EE   +G L+ +E+  LE     
Sbjct: 239 VRALQGEQGVVECAYVEGDGQYARFFSQPLLLGKNGVEERKSIGTLSAFEQNALEGMLDT 298
Query: 341 LAGSIQKGISFSKK 354
           L   I  G  F  K
Sbjct: 299 LKKDIALGQEFVNK 312

>pdb|1IB6|A Chain A, Crystal Structure Of R153c E. Coli Malate Dehydrogenase Length = 312

Iteration: 1
 Score =  292 bits (747), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 164/314 (52%), Positives = 202/314 (64%), Gaps = 4/314 (1%)
Query: 43  FKVAILGAAGGIGQPLAMLMKIN-PLVSVLHLYDVVN-TPGVTADISHMDTGAVVRGFLG 100
            KVA+LGAAGGIGQ LA+L+K   P  S L LYD+   TPGV  D+SH+ T   ++GF G
Sbjct: 1   MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPVTPGVAVDLSHIPTAVKIKGFSG 60
Query: 101 QPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISN 160
           +     AL G D+V+I AGV RKPGM R DLFN+NAGIV+ L + +AK CP A + +I+N
Sbjct: 61  E-DATPALEGADVVLISAGVARKPGMDRSDLFNVNAGIVKNLVQQVAKTCPKACIGIITN 119
Query: 161 PVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEXXXXXXXXXXXXXXXXHAG 220
           PVN+TV IAAEV KKAG YD  KL GVT LD++ +NTFVAE                H+G
Sbjct: 120 PVNTTVAIAAEVLKKAGVYDKNKLFGVTTLDIICSNTFVAELKGKQPGEVEVPVIGGHSG 179
Query: 221 VTILPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADAC 280
           VTILPLLSQV P  SFT++E   LT RIQN GTEVVEAKAG GSATLSM  AA +F  + 
Sbjct: 180 VTILPLLSQV-PGVSFTEQEVADLTKRIQNAGTEVVEAKAGGGSATLSMGQAAARFGLSL 238
Query: 281 LRGLRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKE 340
           +R L+G+ GVVECA+V        FF+  + LG+ G EE   +G L+ +E+  LE     
Sbjct: 239 VRALQGEQGVVECAYVEGDGQYARFFSQPLLLGKNGVEERKSIGTLSAFEQNALEGMLDT 298
Query: 341 LAGSIQKGISFSKK 354
           L   I  G  F  K
Sbjct: 299 LKKDIALGQEFVNK 312

>pdb|4E0B|A Chain A, 2.17 Angstrom Resolution Crystal Structure Of Malate Dehydrogenase From Vibrio Vulnificus Cmcp6 Length = 313

Iteration: 1
 Score =  290 bits (742), Expect = 9e-79,   Method: Compositional matrix adjust.
 Identities = 163/312 (52%), Positives = 206/312 (66%), Gaps = 5/312 (1%)
Query: 44  KVAILGAAGGIGQPLAMLMKIN-PLVSVLHLYDVVN-TPGVTADISHMDTGAVVRGFLGQ 101
           KVA++GAAGGIGQ LA+L+K   P  S L LYD+   TPGV AD+SH+ T   ++G+ G+
Sbjct: 5   KVAVIGAAGGIGQALALLLKNRLPAGSDLALYDIAPVTPGVAADLSHIPTHVSIKGYAGE 64
Query: 102 PQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNP 161
                AL G D+V+I AGV RKPG  R DLFN+NAGIV++L E IA  CPNA + +I+NP
Sbjct: 65  DPTP-ALEGADVVLISAGVARKPGXDRADLFNVNAGIVKSLAERIAVVCPNACIGIITNP 123
Query: 162 VNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEXXXXXXXXXXXXXXXXHAGV 221
           VN+TVPIAAEV KKAG YD +KL GVT LDV+R+ TFVAE                H+GV
Sbjct: 124 VNTTVPIAAEVLKKAGVYDKRKLFGVTTLDVIRSETFVAELKGQDPGEVRVPVIGGHSGV 183
Query: 222 TILPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACL 281
           TILPLLSQV+    F+ EE   LT RIQN GTEVVEAKAG GSATLS   AA +F  A +
Sbjct: 184 TILPLLSQVE-GVEFSDEEIAALTKRIQNAGTEVVEAKAGGGSATLSXGQAACRFGLALV 242
Query: 282 RGLRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKEL 341
           + L+G+  V+E A+V        FFA  V+LG++G EEI   G L+++E+  L+   + L
Sbjct: 243 KALQGEE-VIEYAYVEGNGEHASFFAQPVKLGKEGVEEILPYGELSDFEKAALDGXLETL 301
Query: 342 AGSIQKGISFSK 353
              IQ G+ F K
Sbjct: 302 NSDIQIGVDFVK 313

>pdb|3P7M|A Chain A, Structure Of Putative Lactate Dehydrogenase From Francisella Tularensis Subsp. Tularensis Schu S4 Length = 321

Iteration: 1
 Score = 92.8 bits (229), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 95/315 (30%), Positives = 145/315 (46%), Gaps = 43/315 (13%)
Query: 44  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAV------VRG 97
           K+ ++GA G IG  LA L  I  L  V+ L+D+         +  + T  +      VRG
Sbjct: 7   KITLVGA-GNIGGTLAHLALIKQLGDVV-LFDIAQGXPNGKALDLLQTCPIEGVDFKVRG 64
Query: 98  FLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNL 157
                 LEN+    D+VI+ AGVPRKPG +RDDL  IN  + +T+ EGI   CPNA V  
Sbjct: 65  TNDYKDLENS----DVVIVTAGVPRKPGXSRDDLLGINIKVXQTVGEGIKHNCPNAFVIC 120
Query: 158 ISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEXXXXXXXXXXXXXXXX 217
           I+NP++  V     + K +G  D K +    +LD  R  TF+A+                
Sbjct: 121 ITNPLDIXV---NXLQKFSGVPDNKIVGXAGVLDSARFRTFLADELNVSVQQVQAYVXGG 177
Query: 218 HAGVTILPL----------LSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSATL 267
           H G T +PL          L Q+       QE  + + +R ++GG E+V A    GSA  
Sbjct: 178 H-GDTXVPLTKXSNVAGVSLEQLVKEGKLKQERLDAIVSRTRSGGGEIV-ALLKTGSAYY 235
Query: 268 SMAYAAVKFADACLRGLRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQLGPLN 327
           + A A ++ A++ L+  +    ++ C             A+KV+ G  G +E   +G   
Sbjct: 236 APAAAGIQXAESFLKDKK---XILPC-------------AAKVKAGXYGLDEDLFVGVPT 279
Query: 328 EYERIGLEKAKKELA 342
           E    G+   + E++
Sbjct: 280 EISANGVRPIEVEIS 294

>pdb|1GV1|A Chain A, Structural Basis For Thermophilic Protein Stability: Structures Of Thermophilic And Mesophilic Malate Dehydrogenases Length = 310

Iteration: 1
 Score = 85.5 bits (210), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 91/322 (28%), Positives = 145/322 (45%), Gaps = 51/322 (15%)
Query: 43  FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQP 102
            K+ ++GA G +G   A  +    L   L L DVV        +   +TG V  G     
Sbjct: 1   MKITVIGA-GNVGATTAFRIADKKLARELVLLDVVEGIPQGKGLDMYETGPV--GLF--- 54
Query: 103 QLENALTGM---------DLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNA 153
             +  +TG          D+VII AG+PRKPGMTR+DL   NAGIV+ + + I K   N 
Sbjct: 55  --DTKITGSNDYADTADSDIVIITAGLPRKPGMTREDLLMKNAGIVKEVTDNIMKHSKNP 112
Query: 154 TVNLISNPVNSTVPIAAEVFKKAGTYDPK-KLLGVT-MLDVVRANTFVAEXXXXXXXXXX 211
            + ++SNP++    +A   + ++G   PK +++G+  +LD  R  +F+A           
Sbjct: 113 IIIVVSNPLDIMTHVA---WVRSGL--PKERVIGMAGVLDAARFRSFIAMELGVSMQDIN 167
Query: 212 XXXXXXH--AGVTILPLLSQVKPPCS--FTQEETEYLTNRIQNGGTEVVEAKAGAGSATL 267
                 H  A V ++   +    P S     E  + L  R +NGG E+VE     GSA  
Sbjct: 168 ACVLGGHGDAMVPVVKYTTVAGIPISDLLPAETIDKLVERTRNGGAEIVE-HLKQGSAFY 226
Query: 268 SMAYAAVKFADA----------CLRGLRGDAGVVECAFVASQVTELPFFASKVRLGRQGA 317
           + A + V+  ++          C  GL G  G+           +  F    V+LGR G 
Sbjct: 227 APASSVVEMVESIVLDRKRVLPCAVGLEGQYGI-----------DKTFVGVPVKLGRNGV 275
Query: 318 EEIFQLGPLNEYERIGLEKAKK 339
           E+I+++  L++ +   L+K+ K
Sbjct: 276 EQIYEIN-LDQADLDLLQKSAK 296

>pdb|1GUZ|A Chain A, Structural Basis For Thermophilic Protein Stability: Structures Of Thermophilic And Mesophilic Malate Dehydrogenases Length = 310

Iteration: 1
 Score = 85.5 bits (210), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 73/244 (29%), Positives = 118/244 (48%), Gaps = 34/244 (13%)
Query: 112 DLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAE 171
           D+VII AG+PRKPGMTR+DL   NAGIV+ + + I K   N  + ++SNP++    +A  
Sbjct: 71  DIVIITAGLPRKPGMTREDLLMKNAGIVKEVTDNIMKHSKNPIIIVVSNPLDIMTHVA-- 128
Query: 172 VFKKAGTYDPK-KLLGVT-MLDVVRANTFVAEXXXXXXXXXXXXXXXXH--AGVTILPLL 227
            + ++G   PK +++G+  +LD  R  +F+A                 H  A V ++   
Sbjct: 129 -WVRSGL--PKERVIGMAGVLDAARFRSFIAMELGVSMQDINACVLGGHGDAMVPVVKYT 185
Query: 228 SQVKPPCS--FTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADA------ 279
           +    P S     E  + L  R +NGG E+VE     GSA  + A + V+  ++      
Sbjct: 186 TVAGIPISDLLPAETIDKLVERTRNGGAEIVE-HLKQGSAFYAPASSVVEMVESIVLDRK 244
Query: 280 ----CLRGLRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLE 335
               C  GL G  G+           +  F    V+LGR G E+I+++  L++ +   L+
Sbjct: 245 RVLPCAVGLEGQYGI-----------DKTFVGVPVKLGRNGVEQIYEIN-LDQADLDLLQ 292
Query: 336 KAKK 339
           K+ K
Sbjct: 293 KSAK 296

>pdb|3TL2|A Chain A, Crystal Structure Of Bacillus Anthracis Str. Ames Malate Dehydrogenase In Closed Conformation Length = 315

Iteration: 1
 Score = 83.2 bits (204), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 69/235 (29%), Positives = 119/235 (50%), Gaps = 20/235 (8%)
Query: 112 DLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAE 171
           D+V+I AG+ RKPGM+RDDL   N+ I++++   IAK  PNA + +++NPV++   +   
Sbjct: 80  DVVVITAGIARKPGMSRDDLVATNSKIMKSITRDIAKHSPNAIIVVLTNPVDA---MTYS 136
Query: 172 VFKKAGTYDPKKLLGVT-MLDVVRANTFVAEXXXXXXXXXXXXXXXXHAGVTILPLLSQ- 229
           VFK+AG +  ++++G + +LD  R  TF+A+                H G  ++PL+   
Sbjct: 137 VFKEAG-FPKERVIGQSGVLDTARFRTFIAQELNLSVKDITGFVLGGH-GDDMVPLVRYS 194
Query: 230 ----VKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRGLR 285
               +       +E  E +  R + GG E+V    G GSA  + A + V+  +A L+  R
Sbjct: 195 YAGGIPLETLIPKERLEAIVERTRKGGGEIV-GLLGNGSAYYAPAASLVEMTEAILKDQR 253
Query: 286 G---DAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKA 337
                   +E  +  S +    +    V LG  G E+I +L  L + E+  L+++
Sbjct: 254 RVLPAIAYLEGEYGYSDL----YLGVPVILGGNGIEKIIELELLAD-EKEALDRS 303

>pdb|3GVH|A Chain A, Crystal Structure Of LactateMALATE DEHYDROGENASE FROM Brucella Melitensis Length = 324

Iteration: 1
 Score = 83.2 bits (204), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 92/327 (28%), Positives = 154/327 (47%), Gaps = 39/327 (11%)
Query: 38  GGAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN-TP-GVTADISHMDTGAVV 95
           G  A  K+A++G+ G IG  LA L  +  L  V+ L+D+   TP G   DI+     + V
Sbjct: 3   GSMARNKIALIGS-GMIGGTLAHLAGLKELGDVV-LFDIAEGTPQGKGLDIAE---SSPV 57
Query: 96  RGFLGQPQLEN---ALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPN 152
            GF  +    N   A+ G D+VI+ AGVPRKPGM+RDDL  IN  ++  +  GI K  P 
Sbjct: 58  DGFDAKFTGANDYAAIEGADVVIVTAGVPRKPGMSRDDLLGINLKVMEQVGAGIKKYAPE 117
Query: 153 ATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVT-MLDVVRANTFVAEXXXXXXXXXX 211
           A V  I+NP+++ V       +K       K++G+  +LD  R   F++E          
Sbjct: 118 AFVICITNPLDAMV----WALQKFSGLPAHKVVGMAGVLDSARFRYFLSEEFNVSVEDVT 173
Query: 212 XXXXXXHAGVTI----------LPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAG 261
                 H    +          +PL   VK   + +Q++ + +  R ++GG E+V     
Sbjct: 174 VFVLGGHGDSMVPLARYSTVAGIPLPDLVKMGWT-SQDKLDKIIQRTRDGGAEIV-GLLK 231
Query: 262 AGSATLSMAYAAVKFADACLRGLRGDAGVVECAFVASQVT-----ELPFFASKVRLGRQG 316
            GSA  + A +A++ A++ L+  +          VA+Q++     +  +      +G  G
Sbjct: 232 TGSAFYAPAASAIQMAESYLKDKK------RVLPVAAQLSGQYGVKDMYVGVPTVIGANG 285
Query: 317 AEEIFQLGPLNEYERIGLEKAKKELAG 343
            E I ++  L++ E+   +K+   +AG
Sbjct: 286 VERIIEI-DLDKDEKAQFDKSVASVAG 311

>pdb|1GV0|A Chain A, Structural Basis For Thermophilic Protein Stability: Structures Of Thermophilic And Mesophilic Malate Dehydrogenases Length = 310

Iteration: 1
 Score = 77.8 bits (190), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 69/244 (28%), Positives = 116/244 (47%), Gaps = 34/244 (13%)
Query: 112 DLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAE 171
           D+V+I AG+PRKPGMTR+DL ++NAGIVR +   I +   N  + ++SNP++    +A  
Sbjct: 71  DIVVITAGLPRKPGMTREDLLSMNAGIVREVTGRIMEHSKNPIIVVVSNPLDIMTHVA-- 128
Query: 172 VFKKAGTYDPK-KLLGVT-MLDVVRANTFVAEXXXXXXXXXXXXXXXXH--AGVTILPLL 227
            ++K+G   PK +++G+  +LD  R  +F+A                 H  A V ++   
Sbjct: 129 -WQKSGL--PKERVIGMAGVLDSARFRSFIAMELGVSMQDVTACVLGGHGDAMVPVVKYT 185
Query: 228 SQVKPPCS--FTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADA------ 279
           +    P +   + E    L  R + GG E+V      GSA  S A + V+  ++      
Sbjct: 186 TVAGIPVADLISAERIAELVERTRTGGAEIVN-HLKQGSAFYSPATSVVEMVESIVLDRK 244
Query: 280 ----CLRGLRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLE 335
               C   L G  G+           +  F    V+LG+ G E I+++  L++ +   L+
Sbjct: 245 RVLTCAVSLDGQYGI-----------DGTFVGVPVKLGKNGVEHIYEI-KLDQSDLDLLQ 292
Query: 336 KAKK 339
           K+ K
Sbjct: 293 KSAK 296

>pdb|1UXI|A Chain A, Large Improvement In The Thermal Stability Of A Tetrameric Malate Dehydrogenase By Single Point Mutations At The Dimer-Dimer Interface Length = 309

Iteration: 1
 Score = 77.0 bits (188), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 68/242 (28%), Positives = 114/242 (47%), Gaps = 16/242 (6%)
Query: 112 DLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAE 171
           D++++ +G PRKPGM+R+DL  +NA I R      A   PNA + +++NP+++   +AAE
Sbjct: 72  DVIVVTSGAPRKPGMSREDLIKVNADITRACISQAAPLSPNAVIIMVNNPLDAMTYLAAE 131
Query: 172 VFKKAGTYDPKKLLG-VTMLDVVRANTFVAEXXXXXXXXXXXXXXXXHAGVTI-LPLLSQ 229
           V      +  ++++G   +LD  R  TF+A                 H    + LP  S 
Sbjct: 132 V----SGFPKERVIGQAGVLDAARYRTFIAMEAGVSVKDVQAMLMGGHGDEMVPLPRFST 187
Query: 230 VK--PPCSFTQ-EETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRGLRG 286
           +   P   F   +    +  R + GG E+V      GSA  + A A  +  +A L+  + 
Sbjct: 188 ISGIPVSEFIAPDRLAQIVERTRKGGGEIVNLLK-TGSAYYAPAAATAQMVEAVLKDKKR 246
Query: 287 DAGVVECAFVASQ--VTELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGS 344
              V   A++  Q  + ++ +F   V LG  G E+I +L PLNE E   L  + K +  +
Sbjct: 247 VMPV--AAYLTGQYGLNDI-YFGVPVILGAGGVEKILEL-PLNEEEMALLNASAKAVRAT 302
Query: 345 IQ 346
           + 
Sbjct: 303 LD 304

>pdb|1UXH|A Chain A, Large Improvement In The Thermal Stability Of A Tetrameric Malate Dehydrogenase By Single Point Mutations At The Dimer-Dimer Interface Length = 309

Iteration: 1
 Score = 77.0 bits (188), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 68/242 (28%), Positives = 114/242 (47%), Gaps = 16/242 (6%)
Query: 112 DLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAE 171
           D++++ +G PRKPGM+R+DL  +NA I R      A   PNA + +++NP+++   +AAE
Sbjct: 72  DVIVVTSGAPRKPGMSREDLIKVNADITRACISQAAPLSPNAVIIMVNNPLDAMTYLAAE 131
Query: 172 VFKKAGTYDPKKLLG-VTMLDVVRANTFVAEXXXXXXXXXXXXXXXXHAGVTI-LPLLSQ 229
           V      +  ++++G   +LD  R  TF+A                 H    + LP  S 
Sbjct: 132 V----SGFPKERVIGQAGVLDAARYRTFIAMEAGVSVQDVQAMLMGGHGDEMVPLPRFST 187
Query: 230 VK--PPCSFTQ-EETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRGLRG 286
           +   P   F   +    +  R + GG E+V      GSA  + A A  +  +A L+  + 
Sbjct: 188 ISGIPVSEFIAPDRLAQIVERTRKGGGEIVNLLK-TGSAYYAPAAATAQMVEAVLKDKKR 246
Query: 287 DAGVVECAFVASQ--VTELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGS 344
              V   A++  Q  + ++ +F   V LG  G E+I +L PLNE E   L  + K +  +
Sbjct: 247 VMPV--AAYLTGQYGLNDI-YFGVPVILGAGGVEKILEL-PLNEEEMALLNASAKAVRAT 302
Query: 345 IQ 346
           + 
Sbjct: 303 LD 304

>pdb|1GUY|A Chain A, Structural Basis For Thermophilic Protein Stability: Structures Of Thermophilic And Mesophilic Malate Dehydrogenases Length = 309

Iteration: 1
 Score = 77.0 bits (188), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 68/242 (28%), Positives = 114/242 (47%), Gaps = 16/242 (6%)
Query: 112 DLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAE 171
           D++++ +G PRKPGM+R+DL  +NA I R      A   PNA + +++NP+++   +AAE
Sbjct: 72  DVIVVTSGAPRKPGMSREDLIKVNADITRACISQAAPLSPNAVIIMVNNPLDAMTYLAAE 131
Query: 172 VFKKAGTYDPKKLLG-VTMLDVVRANTFVAEXXXXXXXXXXXXXXXXHAGVTI-LPLLSQ 229
           V      +  ++++G   +LD  R  TF+A                 H    + LP  S 
Sbjct: 132 V----SGFPKERVIGQAGVLDAARYRTFIAMEAGVSVEDVQAMLMGGHGDEMVPLPRFST 187
Query: 230 VK--PPCSFTQ-EETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRGLRG 286
           +   P   F   +    +  R + GG E+V      GSA  + A A  +  +A L+  + 
Sbjct: 188 ISGIPVSEFIAPDRLAQIVERTRKGGGEIVNLLK-TGSAYYAPAAATAQMVEAVLKDKKR 246
Query: 287 DAGVVECAFVASQ--VTELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGS 344
              V   A++  Q  + ++ +F   V LG  G E+I +L PLNE E   L  + K +  +
Sbjct: 247 VMPV--AAYLTGQYGLNDI-YFGVPVILGAGGVEKILEL-PLNEEEMALLNASAKAVRAT 302
Query: 345 IQ 346
           + 
Sbjct: 303 LD 304

>pdb|2HJR|A Chain A, Crystal Structure Of Cryptosporidium Parvum Malate Dehydrogenase Length = 328

Iteration: 1
 Score = 77.0 bits (188), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 57/158 (36%), Positives = 89/158 (56%), Gaps = 17/158 (10%)
Query: 44  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISH----MDTGAVVRG 97
           K++I+GA G IG  +A+L+    L  V +++D++     G   D++H    + + A + G
Sbjct: 16  KISIIGA-GQIGSTIALLLGQKDLGDV-YMFDIIEGVPQGKALDLNHCMALIGSPAKIFG 73
Query: 98  FLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNL 157
                 L+N+    D+VII AGVPRKP MTR DL  +NA IV ++ E + K CPNA V  
Sbjct: 74  ENNYEYLQNS----DVVIITAGVPRKPNMTRSDLLTVNAKIVGSVAENVGKYCPNAFVIC 129
Query: 158 ISNPVNSTVPIAAEVFKKAGTYDPKKLLGVT-MLDVVR 194
           I+NP+++ V      FK+       K+ G++ +LD  R
Sbjct: 130 ITNPLDAMV----YYFKEKSGIPANKVCGMSGVLDSAR 163

>pdb|1UR5|A Chain A, Stabilization Of A Tetrameric Malate Dehydrogenase By Introduction Of A Disulfide Bridge At The DimerDIMER Interface Length = 309

Iteration: 1
 Score = 75.5 bits (184), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 68/242 (28%), Positives = 114/242 (47%), Gaps = 16/242 (6%)
Query: 112 DLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAE 171
           D++++ +G PRKPGM+R+DL  +NA I R      A   PNA + +++NP+++   +AAE
Sbjct: 72  DVIVVTSGAPRKPGMSREDLIKVNADITRACISQAAPLSPNAVIIMVNNPLDAMTYLAAE 131
Query: 172 VFKKAGTYDPKKLLG-VTMLDVVRANTFVAEXXXXXXXXXXXXXXXXHAGVTI-LPLLSQ 229
           V      +  ++++G   +LD  R  TF+A                 H    + LP  S 
Sbjct: 132 V----SGFPKERVIGQAGVLDAARYRTFIAMEAGVSVEDVQAMLMGGHGDEMVPLPRFSC 187
Query: 230 VK--PPCSFTQ-EETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRGLRG 286
           +   P   F   +    +  R + GG E+V      GSA  + A A  +  +A L+  + 
Sbjct: 188 ISGIPVSEFIAPDRLAQIVERTRKGGGEIVNLLK-TGSAYYAPAAATAQMVEAVLKDKKR 246
Query: 287 DAGVVECAFVASQ--VTELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGS 344
              V   A++  Q  + ++ +F   V LG  G E+I +L PLNE E   L  + K +  +
Sbjct: 247 VMPV--AAYLTGQYGLNDI-YFGVPVILGAGGVEKILEL-PLNEEEMALLNASAKAVRAT 302
Query: 345 IQ 346
           + 
Sbjct: 303 LD 304

>pdb|3OM9|A Chain A, T. Gondii Bradyzoite-Specific Ldh (Ldh1) In Complex With Nad And Oxq Length = 329

Iteration: 1
 Score = 68.6 bits (166), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 68/236 (28%), Positives = 107/236 (45%), Gaps = 32/236 (13%)
Query: 44  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHM----DTGAVVRG 97
           KVA++G+ G IG  +  L  +  L  V+ LYDVV     G   D+SH+    DT   VR 
Sbjct: 9   KVAMIGS-GMIGGTMGYLCALRELADVV-LYDVVKGMPEGKALDLSHVTSVVDTNVSVRA 66
Query: 98  FLGQPQLENALTGMDLVIIPAGVPRKPG-----MTRDDLFNINAGIVRTLCEGIAKCCPN 152
              +   E ALTG D VI+ AG+ + PG      +R+DL   N+ I+R + + I K CP 
Sbjct: 67  ---EYSYEAALTGADCVIVTAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKYCPK 123
Query: 153 ATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVT-MLDVVRANTFVAEXXXXXXXXXX 211
             + +++NP++  V +  E    A       + G+  MLD  R   +VA+          
Sbjct: 124 TFIIVVTNPLDCMVKVMCE----ASGVPTNMICGMACMLDSGRFRRYVADALSVSPRDVQ 179
Query: 212 XXXXXXHAGVTILPLLSQVK----PPCSF------TQEETEYLTNRIQNGGTEVVE 257
                 H G  ++PL+  +     P   F      T+++ E +    +  G E+V 
Sbjct: 180 ATVIGTH-GDCMVPLVRYITVNGYPIQKFIKDGVVTEKQLEEIAEHTKVSGGEIVR 234

>pdb|1PZE|A Chain A, T.gondii Ldh1 Apo Form Length = 331

Iteration: 1
 Score = 68.6 bits (166), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 68/236 (28%), Positives = 107/236 (45%), Gaps = 32/236 (13%)
Query: 44  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHM----DTGAVVRG 97
           KVA++G+ G IG  +  L  +  L  V+ LYDVV     G   D+SH+    DT   VR 
Sbjct: 11  KVAMIGS-GMIGGTMGYLCALRELADVV-LYDVVKGMPEGKALDLSHVTSVVDTNVSVRA 68
Query: 98  FLGQPQLENALTGMDLVIIPAGVPRKPG-----MTRDDLFNINAGIVRTLCEGIAKCCPN 152
              +   E ALTG D VI+ AG+ + PG      +R+DL   N+ I+R + + I K CP 
Sbjct: 69  ---EYSYEAALTGADCVIVTAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKYCPK 125
Query: 153 ATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVT-MLDVVRANTFVAEXXXXXXXXXX 211
             + +++NP++  V +  E    A       + G+  MLD  R   +VA+          
Sbjct: 126 TFIIVVTNPLDCMVKVMCE----ASGVPTNMICGMACMLDSGRFRRYVADALSVSPRDVQ 181
Query: 212 XXXXXXHAGVTILPLLSQVK----PPCSF------TQEETEYLTNRIQNGGTEVVE 257
                 H G  ++PL+  +     P   F      T+++ E +    +  G E+V 
Sbjct: 182 ATVIGTH-GDCMVPLVRYITVNGYPIQKFIKDGVVTEKQLEEIAEHTKVSGGEIVR 236

>pdb|1PZG|A Chain A, T.Gondii Ldh1 Complexed With Apad And Sulfate At 1.6 Angstroms Length = 331

Iteration: 1
 Score = 68.6 bits (166), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 68/236 (28%), Positives = 107/236 (45%), Gaps = 32/236 (13%)
Query: 44  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHM----DTGAVVRG 97
           KVA++G+ G IG  +  L  +  L  V+ LYDVV     G   D+SH+    DT   VR 
Sbjct: 11  KVAMIGS-GMIGGTMGYLCALRELADVV-LYDVVKGMPEGKALDLSHVTSVVDTNVSVRA 68
Query: 98  FLGQPQLENALTGMDLVIIPAGVPRKPG-----MTRDDLFNINAGIVRTLCEGIAKCCPN 152
              +   E ALTG D VI+ AG+ + PG      +R+DL   N+ I+R + + I K CP 
Sbjct: 69  ---EYSYEAALTGADCVIVTAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKYCPK 125
Query: 153 ATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVT-MLDVVRANTFVAEXXXXXXXXXX 211
             + +++NP++  V +  E    A       + G+  MLD  R   +VA+          
Sbjct: 126 TFIIVVTNPLDCMVKVMXE----ASGVPTNMICGMACMLDSGRFRRYVADALSVSPRDVQ 181
Query: 212 XXXXXXHAGVTILPLLSQVK----PPCSF------TQEETEYLTNRIQNGGTEVVE 257
                 H G  ++PL+  +     P   F      T+++ E +    +  G E+V 
Sbjct: 182 ATVIGTH-GDCMVPLVRYITVNGYPIQKFIKDGVVTEKQLEEIAEHTKVSGGEIVR 236

>pdb|1SOV|A Chain A, Toxoplasma Gondii Bradyzoite-specific Ldh (ldh2) Apo Form Length = 328

Iteration: 1
 Score = 67.8 bits (164), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 70/257 (27%), Positives = 113/257 (43%), Gaps = 26/257 (10%)
Query: 44  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLGQ 101
           K+A++G+ G IG  +  L  +  L  V+ L+DVV     G   D S   + A     +  
Sbjct: 10  KIAMIGS-GMIGGTMGYLCVLRELADVV-LFDVVTGMPEGKALDDSQATSIADTNVSVTS 67
Query: 102 PQLENALTGMDLVIIPAGVPRKPG-----MTRDDLFNINAGIVRTLCEGIAKCCPNATVN 156
                 + G D+VII AG+ + PG      +R+DL   NA I+R + +G+ K CP A V 
Sbjct: 68  ANQYEKIAGSDVVIITAGLTKVPGKSDKEWSRNDLLPFNAKIIREVAQGVKKYCPLAFVI 127
Query: 157 LISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRANTFVAEXXXXXXXXXXXXXX 215
           +++NP++  V    + F +A       + G+  +LD  R   F+A+              
Sbjct: 128 VVTNPLDCMV----KCFHEASGLPKNMVCGMANVLDSARFRRFIADQLEISPRDIQATVI 183
Query: 216 XXHAGVTILPL----------LSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSA 265
             H G  +LPL          L +       T+ +   +  R +  G E+V    G GSA
Sbjct: 184 GTH-GDHMLPLARYVTVNGFPLREFIKKGKMTEAKLAEIVERTKKAGGEIVRL-LGQGSA 241
Query: 266 TLSMAYAAVKFADACLR 282
             + A +A+  A A L+
Sbjct: 242 YYAPALSAITMAQAFLK 258

>pdb|3CZM|A Chain A, T. Gondii Bradyzoite-Specific Ldh (Ldh2) In Complex With Nad And Oxq Length = 326

Iteration: 1
 Score = 67.8 bits (164), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 70/257 (27%), Positives = 113/257 (43%), Gaps = 26/257 (10%)
Query: 44  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLGQ 101
           K+A++G+ G IG  +  L  +  L  V+ L+DVV     G   D S   + A     +  
Sbjct: 10  KIAMIGS-GMIGGTMGYLCVLRELADVV-LFDVVTGMPEGKALDDSQATSIADTNVSVTS 67
Query: 102 PQLENALTGMDLVIIPAGVPRKPG-----MTRDDLFNINAGIVRTLCEGIAKCCPNATVN 156
                 + G D+VII AG+ + PG      +R+DL   NA I+R + +G+ K CP A V 
Sbjct: 68  ANQYEKIAGSDVVIITAGLTKVPGKSDKEWSRNDLLPFNAKIIREVAQGVKKYCPLAFVI 127
Query: 157 LISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRANTFVAEXXXXXXXXXXXXXX 215
           +++NP++  V    + F +A       + G+  +LD  R   F+A+              
Sbjct: 128 VVTNPLDCMV----KCFHEASGLPKNMVCGMANVLDSARFRRFIADQLEISPRDIQATVI 183
Query: 216 XXHAGVTILPL----------LSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSA 265
             H G  +LPL          L +       T+ +   +  R +  G E+V    G GSA
Sbjct: 184 GTH-GDHMLPLARYVTVNGFPLREFIKKGKMTEAKLAEIVERTKKAGGEIVRL-LGQGSA 241
Query: 266 TLSMAYAAVKFADACLR 282
             + A +A+  A A L+
Sbjct: 242 YYAPALSAITMAQAFLK 258

>pdb|1A5Z|A Chain A, Lactate Dehydrogenase From Thermotoga Maritima (tmldh) Length = 319

Iteration: 1
 Score = 67.0 bits (162), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 35/95 (36%), Positives = 56/95 (58%), Gaps = 5/95 (5%)
Query: 108 LTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVP 167
           L G D+VI+ AGVP+KPG TR  L   NA +++ +   ++K  P++ V +++NPV+    
Sbjct: 65  LKGSDVVIVAAGVPQKPGETRLQLLGRNARVMKEIARNVSKYAPDSIVIVVTNPVD---- 120
Query: 168 IAAEVFKKAGTYDPKKLLGV-TMLDVVRANTFVAE 201
           +    F K    DP+K+ G  T+LD  R  T +A+
Sbjct: 121 VLTYFFLKESGMDPRKVFGSGTVLDTARLRTLIAQ 155

>pdb|1T24|A Chain A, Plasmodium Falciparum Lactate Dehydrogenase Complexed With Nad+ And 4- Hydroxy-1,2,5-Oxadiazole-3-Carboxylic Acid Length = 322

Iteration: 1
 Score = 66.2 bits (160), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 84/318 (26%), Positives = 143/318 (44%), Gaps = 36/318 (11%)
Query: 44  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVV-NTP-GVTADISHMDTGAVVRGFLGQ 101
           K+ ++G+ G IG  +A L+    L  V+ L+D+V N P G   D SH +  A     +  
Sbjct: 6   KIVLVGS-GMIGGVMATLIVQKNLGDVV-LFDIVKNMPHGKALDTSHTNVMAYSNCKVSG 63
Query: 102 PQLENALTGMDLVIIPAGVPRKPG-----MTRDDLFNINAGIVRTLCEGIAKCCPNATVN 156
               + L G D+VI+ AG  + PG       RDDL  +N  I+  +   I K CPNA + 
Sbjct: 64  SNTYDDLAGADVVIVTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKNCPNAFII 123
Query: 157 LISNPVNSTVPIAAEVFKKAGTYDPK-KLLGV-TMLDVVRANTFVAEXXXXXXXXXXXXX 214
           +++NPV+  V +   + + +G   PK K++G+  +LD  R   ++++             
Sbjct: 124 VVTNPVDVMVQL---LHQHSGV--PKNKIIGLGGVLDTSRLKYYISQKLNVCPRDVNAHI 178
Query: 215 XXXHAGVTIL----------PLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGS 264
              H    +L          PL   +      +  E E + +R  N   E+V   A   S
Sbjct: 179 VGAHGNKMVLLKRYITVGGIPLQEFINNKL-ISDAELEAIFDRTVNTALEIVNLHA---S 234
Query: 265 ATLSMAYAAVKFADACLRGLRGDAGVVECA-FVASQVTELPFF-ASKVRLGRQGAEEIFQ 322
             ++ A A ++ A++ L+ L+    V+ C+  +  Q      F  + V LG  G E++ +
Sbjct: 235 PYVAPAAAIIEMAESYLKDLK---KVLICSTLLEGQYGHSDIFGGTPVVLGANGVEQVIE 291
Query: 323 LGPLNEYERIGLEKAKKE 340
           L  LN  E+   ++A  E
Sbjct: 292 L-QLNSEEKAKFDEAIAE 308

>pdb|1U4O|A Chain A, Plasmodium Falciparum Lactate Dehydrogenase Complexed With 2,6- Naphthalenedicarboxylic Acid Length = 321

Iteration: 1
 Score = 66.2 bits (160), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 84/318 (26%), Positives = 143/318 (44%), Gaps = 36/318 (11%)
Query: 44  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVV-NTP-GVTADISHMDTGAVVRGFLGQ 101
           K+ ++G+ G IG  +A L+    L  V+ L+D+V N P G   D SH +  A     +  
Sbjct: 5   KIVLVGS-GMIGGVMATLIVQKNLGDVV-LFDIVKNMPHGKALDTSHTNVMAYSNCKVSG 62
Query: 102 PQLENALTGMDLVIIPAGVPRKPG-----MTRDDLFNINAGIVRTLCEGIAKCCPNATVN 156
               + L G D+VI+ AG  + PG       RDDL  +N  I+  +   I K CPNA + 
Sbjct: 63  SNTYDDLAGADVVIVTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKNCPNAFII 122
Query: 157 LISNPVNSTVPIAAEVFKKAGTYDPK-KLLGV-TMLDVVRANTFVAEXXXXXXXXXXXXX 214
           +++NPV+  V +   + + +G   PK K++G+  +LD  R   ++++             
Sbjct: 123 VVTNPVDVMVQL---LHQHSGV--PKNKIIGLGGVLDTSRLKYYISQKLNVCPRDVNAHI 177
Query: 215 XXXHAGVTIL----------PLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGS 264
              H    +L          PL   +      +  E E + +R  N   E+V   A   S
Sbjct: 178 VGAHGNKMVLLKRYITVGGIPLQEFINNKL-ISDAELEAIFDRTVNTALEIVNLHA---S 233
Query: 265 ATLSMAYAAVKFADACLRGLRGDAGVVECA-FVASQVTELPFF-ASKVRLGRQGAEEIFQ 322
             ++ A A ++ A++ L+ L+    V+ C+  +  Q      F  + V LG  G E++ +
Sbjct: 234 PYVAPAAAIIEMAESYLKDLK---KVLICSTLLEGQYGHSDIFGGTPVVLGANGVEQVIE 290
Query: 323 LGPLNEYERIGLEKAKKE 340
           L  LN  E+   ++A  E
Sbjct: 291 L-QLNSEEKAKFDEAIAE 307

>pdb|1CEQ|A Chain A, Chloroquine Binds In The Cofactor Binding Site Of Plasmodium Falciparum Lactate Dehydrogenase Length = 316

Iteration: 1
 Score = 66.2 bits (160), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 84/318 (26%), Positives = 143/318 (44%), Gaps = 36/318 (11%)
Query: 44  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVV-NTP-GVTADISHMDTGAVVRGFLGQ 101
           K+ ++G+ G IG  +A L+    L  V+ L+D+V N P G   D SH +  A     +  
Sbjct: 6   KIVLVGS-GMIGGVMATLIVQKNLGDVV-LFDIVKNMPHGKALDTSHTNVMAYSNCKVSG 63
Query: 102 PQLENALTGMDLVIIPAGVPRKPG-----MTRDDLFNINAGIVRTLCEGIAKCCPNATVN 156
               + L G D+VI+ AG  + PG       RDDL  +N  I+  +   I K CPNA + 
Sbjct: 64  SNTYDDLAGSDVVIVTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKNCPNAFII 123
Query: 157 LISNPVNSTVPIAAEVFKKAGTYDPK-KLLGV-TMLDVVRANTFVAEXXXXXXXXXXXXX 214
           +++NPV+  V +   + + +G   PK K++G+  +LD  R   ++++             
Sbjct: 124 VVTNPVDVMVQL---LHQHSGV--PKNKIIGLGGVLDTSRLKYYISQKLNVCPRDVNAHI 178
Query: 215 XXXHAGVTIL----------PLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGS 264
              H    +L          PL   +      +  E E + +R  N   E+V   A   S
Sbjct: 179 VGAHGNKMVLLKRYITVGGIPLQEFINNKL-ISDAELEAIFDRTVNTALEIVNLHA---S 234
Query: 265 ATLSMAYAAVKFADACLRGLRGDAGVVECA-FVASQVTELPFF-ASKVRLGRQGAEEIFQ 322
             ++ A A ++ A++ L+ L+    V+ C+  +  Q      F  + V LG  G E++ +
Sbjct: 235 PYVAPAAAIIEMAESYLKDLK---KVLICSTLLEGQYGHSDIFGGTPVVLGANGVEQVIE 291
Query: 323 LGPLNEYERIGLEKAKKE 340
           L  LN  E+   ++A  E
Sbjct: 292 L-QLNSEEKAKFDEAIAE 308

>pdb|1XIV|A Chain A, Plasmodium Falciparum Lactate Dehydrogenase Complexed With 2-({4- Chloro-[hydroxy(Methoxy)methyl]cyclohexyl}amino)ethane- 1,1,2-Triol Length = 323

Iteration: 1
 Score = 66.2 bits (160), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 84/318 (26%), Positives = 143/318 (44%), Gaps = 36/318 (11%)
Query: 44  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVV-NTP-GVTADISHMDTGAVVRGFLGQ 101
           K+ ++G+ G IG  +A L+    L  V+ L+D+V N P G   D SH +  A     +  
Sbjct: 5   KIVLVGS-GMIGGVMATLIVQKNLGDVV-LFDIVKNMPHGKALDTSHTNVMAYSNCKVSG 62
Query: 102 PQLENALTGMDLVIIPAGVPRKPG-----MTRDDLFNINAGIVRTLCEGIAKCCPNATVN 156
               + L G D+VI+ AG  + PG       RDDL  +N  I+  +   I K CPNA + 
Sbjct: 63  SNTYDDLAGADVVIVTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKNCPNAFII 122
Query: 157 LISNPVNSTVPIAAEVFKKAGTYDPK-KLLGV-TMLDVVRANTFVAEXXXXXXXXXXXXX 214
           +++NPV+  V +   + + +G   PK K++G+  +LD  R   ++++             
Sbjct: 123 VVTNPVDVMVQL---LHQHSGV--PKNKIIGLGGVLDTSRLKYYISQKLNVCPRDVNAHI 177
Query: 215 XXXHAGVTIL----------PLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGS 264
              H    +L          PL   +      +  E E + +R  N   E+V   A   S
Sbjct: 178 VGAHGNKMVLLKRYITVGGIPLQEFINNKL-ISDAELEAIFDRTVNTALEIVNLHA---S 233
Query: 265 ATLSMAYAAVKFADACLRGLRGDAGVVECA-FVASQVTELPFF-ASKVRLGRQGAEEIFQ 322
             ++ A A ++ A++ L+ L+    V+ C+  +  Q      F  + V LG  G E++ +
Sbjct: 234 PYVAPAAAIIEMAESYLKDLK---KVLICSTLLEGQYGHSDIFGGTPVVLGANGVEQVIE 290
Query: 323 LGPLNEYERIGLEKAKKE 340
           L  LN  E+   ++A  E
Sbjct: 291 L-QLNSEEKAKFDEAIAE 307

>pdb|3FI9|A Chain A, Crystal Structure Of Malate Dehydrogenase From Porphyromonas Gingivalis Length = 343

Iteration: 1
 Score = 65.1 bits (157), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 86/321 (26%), Positives = 129/321 (40%), Gaps = 41/321 (12%)
Query: 44  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYD--VVNTPGVTADISHMDTGAVVRGFLG- 100
           K+ I+GAAG IG  +A    +  L   L LYD   V   GV  +I H        GF G 
Sbjct: 10  KLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFAVGLEGVAEEIRHC-------GFEGL 62
Query: 101 ----QPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNAT-V 155
                  ++ ALT    ++   G PRK GMTR+DL   NA I   L + I   CP+   V
Sbjct: 63  NLTFTSDIKEALTDAKYIVSSGGAPRKEGMTREDLLKGNAEIAAQLGKDIKSYCPDCKHV 122
Query: 156 NLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEXXXXXXXXXXXXXX 215
            +I NP +    I   V        P ++  +  LD  R  + +A+              
Sbjct: 123 IIIFNPAD----ITGLVTLIYSGLKPSQVTTLAGLDSTRLQSELAKHFGIKQSLVTNTRT 178
Query: 216 XXHAGVTILPLLSQVK---PPCS-------FTQEETEYLTNRIQNGGTEVVEAKAGAGSA 265
               G  +    S  K    P +        T E+   L  R+  GG  +++ +    S+
Sbjct: 179 YGGHGEQMAVFASTAKVNGTPLTDLIGTDKLTNEQWAELKQRVVKGGANIIKLR--GRSS 236
Query: 266 TLSMAYAAVKFADACLRG--LRGDAGVVECAFVASQVTELPFFASKVRLGRQGAE--EIF 321
             S +Y +++   A + G   R  AG     +V     E    A +  + + G +  +I 
Sbjct: 237 FQSPSYVSIEMIRAAMGGEAFRWPAG----CYVNVPGFEHIMMAMETTITKDGVKHSDIN 292
Query: 322 QLGPLNEYERIGLEKAKKELA 342
           QLG  NE ER  L+++   LA
Sbjct: 293 QLG--NEAERAALKESYSHLA 311

>pdb|2D4A|A Chain A, Structure Of The Malate Dehydrogenase From Aeropyrum Pernix Length = 308

Iteration: 1
 Score = 64.7 bits (156), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 78/309 (25%), Positives = 140/309 (45%), Gaps = 35/309 (11%)
Query: 45  VAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP-GVTADISHM--DTGAVVRGFLGQ 101
           + ILGA G +G   A+++ +     +L +      P G   D++H   + G  +R   G 
Sbjct: 2   ITILGA-GKVGMATAVMLMMRGYDDLLLIARTPGKPQGEALDLAHAAAELGVDIR-ISGS 59
Query: 102 PQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNP 161
              E+ + G D+V++ AG+ RKPGMTR+ L   NA  +  L E I     +A V + +NP
Sbjct: 60  NSYED-MRGSDIVLVTAGIGRKPGMTREQLLEANANTMADLAEKIKAYAKDAIVVITTNP 118
Query: 162 VNSTVPIAAEVFKKAGTYDPKKLLGVT-MLDVVRANTFVAEXXXXXXXXXXXXXXXXHAG 220
           V++   +   ++KK G +  ++++G + +LD  R   ++++                H  
Sbjct: 119 VDAMTYV---MYKKTG-FPRERVIGFSGILDSARMAYYISQKLGVSFKSVNAIVLGMHGQ 174
Query: 221 VTI-LPLLSQV-KPPCS--FTQEETEYLTNRIQNGGTEVVEAKAGAG----SATLSMAYA 272
               +P LS V   P     ++EE E + +   N G ++ E +  +     +A L +   
Sbjct: 175 KMFPVPRLSSVGGVPLEHLMSKEEIEEVVSETVNAGAKITELRGYSSNYGPAAGLVLTVE 234
Query: 273 AVKFADACLR----GLRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQLGPLNE 328
           A+K     +      L+G+ G  +       V E+P       +G+ G E I +L PL E
Sbjct: 235 AIKRDSKRIYPYSLYLQGEYGYNDI------VAEVPAV-----IGKSGIERIIEL-PLTE 282
Query: 329 YERIGLEKA 337
            E+   ++A
Sbjct: 283 DEKRKFDEA 291

>pdb|2J5K|A Chain A, 2.0 A Resolution Structure Of The Wild Type Malate Dehydrogenase From Haloarcula Marismortui (radiation Damage Series) Length = 304

Iteration: 1
 Score = 64.7 bits (156), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 76/280 (27%), Positives = 119/280 (42%), Gaps = 28/280 (10%)
Query: 78  NTPGVTADISH---MDTGAVVRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNI 134
           +T G  AD +H    D+   VR    Q   E+   G D+V+I AG+PR+PG TR DL   
Sbjct: 41  DTVGQAADTNHGIAYDSNTRVR----QGGYEDT-AGSDVVVITAGIPRQPGQTRIDLAGD 95
Query: 135 NAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVV 193
           NA I+  +   + +   +      SNPV+    +      +AG    ++++G    LD  
Sbjct: 96  NAPIMEDIQSSLDEHNDDYISLTTSNPVD----LLNRHLYEAGDRSREQVIGFGGRLDSA 151
Query: 194 RANTFVAEXXXXXXXXXXXXXXXXHAGVTILPLLSQVKPPCS---FTQEETEYLTNRIQN 250
           R    ++E                H G   +P+ S+V+   +   F+ +E E L   +Q 
Sbjct: 152 RFRYVLSEEFDAPVQNVEGTILGEH-GDAQVPVFSKVRVDGTDPEFSGDEKEQLLGDLQE 210
Query: 251 GGTEVVEAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECAFVASQVT---ELPFFA 307
              +V+E K   G+     A       +A L     D G V  A V  +     E   F 
Sbjct: 211 SAMDVIERK---GATEWGPARGVAHMVEAILH----DTGEVLPASVKLEGEFGHEDTAFG 263
Query: 308 SKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSIQK 347
             VRLG  G EEI +   L++YE+  +  A ++L+    K
Sbjct: 264 VPVRLGSNGVEEIVEW-DLDDYEQDLMADAAEKLSDQYDK 302

>pdb|1HLP|A Chain A, Structural Features Stabilizing Halophilic Malate Dehydrogenase From An Archaebacterium Length = 303

Iteration: 1
 Score = 64.3 bits (155), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 76/280 (27%), Positives = 119/280 (42%), Gaps = 28/280 (10%)
Query: 78  NTPGVTADISH---MDTGAVVRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNI 134
           +T G  AD +H    D+   VR    Q   E+   G D+V+I AG+PR+PG TR DL   
Sbjct: 40  DTVGQAADTNHGIAYDSNTRVR----QGGYEDT-AGSDVVVITAGIPRQPGQTRIDLAGD 94
Query: 135 NAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVV 193
           NA I+  +   + +   +      SNPV+    +      +AG    ++++G    LD  
Sbjct: 95  NAPIMEDIQSSLDEHNDDYISLTTSNPVD----LLNRHLYEAGDRSREQVIGFGGRLDSA 150
Query: 194 RANTFVAEXXXXXXXXXXXXXXXXHAGVTILPLLSQVKPPCS---FTQEETEYLTNRIQN 250
           R    ++E                H G   +P+ S+V+   +   F+ +E E L   +Q 
Sbjct: 151 RFRYVLSEEFDAPVQNVEGTILGEH-GDAQVPVFSKVRVDGTDPEFSGDEKEQLLGDLQE 209
Query: 251 GGTEVVEAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECAFVASQVT---ELPFFA 307
              +V+E K   G+     A       +A L     D G V  A V  +     E   F 
Sbjct: 210 SAMDVIERK---GATEWGPARGVAHMVEAILH----DTGEVLPASVKLEGEFGHEDTAFG 262
Query: 308 SKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSIQK 347
             VRLG  G EEI +   L++YE+  +  A ++L+    K
Sbjct: 263 VPVRLGSNGVEEIVEW-DLDDYEQDLMADAAEKLSDQYDK 301

>pdb|2HLP|A Chain A, Crystal Structure Of The E267r Mutant Of A Halophilic Malate Dehydrogenase In The Apo Form Length = 303

Iteration: 1
 Score = 64.3 bits (155), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 76/280 (27%), Positives = 119/280 (42%), Gaps = 28/280 (10%)
Query: 78  NTPGVTADISH---MDTGAVVRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNI 134
           +T G  AD +H    D+   VR    Q   E+   G D+V+I AG+PR+PG TR DL   
Sbjct: 40  DTVGQAADTNHGIAYDSNTRVR----QGGYEDT-AGSDVVVITAGIPRQPGQTRIDLAGD 94
Query: 135 NAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVV 193
           NA I+  +   + +   +      SNPV+    +      +AG    ++++G    LD  
Sbjct: 95  NAPIMEDIQSSLDEHNDDYISLTTSNPVD----LLNRHLYEAGDRSREQVIGFGGRLDSA 150
Query: 194 RANTFVAEXXXXXXXXXXXXXXXXHAGVTILPLLSQVKPPCS---FTQEETEYLTNRIQN 250
           R    ++E                H G   +P+ S+V+   +   F+ +E E L   +Q 
Sbjct: 151 RFRYVLSEEFDAPVQNVEGTILGEH-GDAQVPVFSKVRVDGTDPEFSGDEKEQLLGDLQE 209
Query: 251 GGTEVVEAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECAFVASQVT---ELPFFA 307
              +V+E K   G+     A       +A L     D G V  A V  +     E   F 
Sbjct: 210 SAMDVIERK---GATEWGPARGVAHMVEAILH----DTGRVLPASVKLEGEFGHEDTAFG 262
Query: 308 SKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSIQK 347
             VRLG  G EEI +   L++YE+  +  A ++L+    K
Sbjct: 263 VPVRLGSNGVEEIVEW-DLDDYEQDLMADAAEKLSDQYDK 301

>pdb|3NEP|X Chain X, 1.55a Resolution Structure Of Malate Dehydrogenase From Salinibacter Ruber Length = 314

Iteration: 1
 Score = 64.3 bits (155), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 59/220 (26%), Positives = 100/220 (45%), Gaps = 18/220 (8%)
Query: 112 DLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAE 171
           D+ II AG+PR PGM+RDDL   N  IV  + E   +  P++T+ +++NP++    +A E
Sbjct: 71  DVCIITAGLPRSPGMSRDDLLAKNTEIVGGVTEQFVEGSPDSTIIVVANPLDVMTYVAYE 130
Query: 172 VFKKAGTYDPKKLLGVT-MLDVVRANTFVAEXXXXXXXXXXXXXXXXHAGVTILPL---- 226
               A  +   +++G+  +LD  R  +F+AE                H G T++PL    
Sbjct: 131 ----ASGFPTNRVMGMAGVLDTGRFRSFIAEELDVSVRDVQALLMGGH-GDTMVPLPRYT 185
Query: 227 -LSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRGLR 285
            +  +  P        E +  R +  G E+V+      SA  +   AA +  +A    L+
Sbjct: 186 TVGGIPVPQLIDDARIEEIVERTKGAGGEIVDLM--GTSAWYAPGAAAAEMTEAI---LK 240
Query: 286 GDAGVVECAFVASQVTELP--FFASKVRLGRQGAEEIFQL 323
            +  ++ CA        L   F    V+LG  G EE+ ++
Sbjct: 241 DNKRILPCAAYCDGEYGLDDLFIGVPVKLGAGGVEEVIEV 280

>pdb|2A92|A Chain A, Crystal Structure Of Lactate Dehydrogenase From Plasmodium Vivax: Complex With Nadh Length = 321

Iteration: 1
 Score = 63.9 bits (154), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 82/315 (26%), Positives = 141/315 (44%), Gaps = 35/315 (11%)
Query: 47  ILGAAGGIGQPLAMLMKINPLVSVLHLYDVV-NTP-GVTADISHMDTGAVVRGFLGQPQL 104
           +L  +G IG  +A L+    L  V+ ++DVV N P G   D SH +  A     +     
Sbjct: 7   VLVGSGMIGGVMATLIVQKNLGDVV-MFDVVKNMPQGKALDTSHSNVMAYSNCKVTGSNS 65
Query: 105 ENALTGMDLVIIPAGVPRKPG-----MTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS 159
            + L G D+VI+ AG  + PG       RDDL  +N  I+  +   I   CPNA + +++
Sbjct: 66  YDDLKGADVVIVTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKNLCPNAFIIVVT 125
Query: 160 NPVNSTVPIAAEVFKKAGTYDPK-KLLGV-TMLDVVRANTFVAEXXXXXXXXXXXXXXXX 217
           NPV+  V +   +F+ +G   PK K++G+  +LD  R   ++++                
Sbjct: 126 NPVDVMVQL---LFEHSGV--PKNKIIGLGGVLDTSRLKYYISQKLNVCPRDVNALIVGA 180
Query: 218 HAGVTIL----------PLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSATL 267
           H    +L          PL   +      T EE E + +R  N   E+V   A   S  +
Sbjct: 181 HGNKMVLLKRYITVGGIPLQEFINNK-KITDEEVEGIFDRTVNTALEIVNLLA---SPYV 236
Query: 268 SMAYAAVKFADACLRGLRGDAGVVECA-FVASQVTELPFF-ASKVRLGRQGAEEIFQLGP 325
           + A A ++ A++ L+ ++    V+ C+  +  Q      F  + + +G  G E++ +L  
Sbjct: 237 APAAAIIEMAESYLKDIK---KVLVCSTLLEGQYGHSNIFGGTPLVIGGTGVEQVIEL-Q 292
Query: 326 LNEYERIGLEKAKKE 340
           LN  E+   ++A  E
Sbjct: 293 LNAEEKTKFDEAVAE 307

>pdb|1Y6J|A Chain A, L-Lactate Dehydrogenase From Clostridium Thermocellum Cth-1135 Length = 318

Iteration: 1
 Score = 63.5 bits (153), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 80/324 (24%), Positives = 133/324 (41%), Gaps = 46/324 (14%)
Query: 44  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP--GVTADISHMDTGAVVRGFLGQ 101
           KVAI+GA G +G   A  M +    + L L DV      G   DI+H         F+GQ
Sbjct: 9   KVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHG------LPFMGQ 61
Query: 102 PQLE----NALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNL 157
             L     + +   D++++ AG  RKPG TR DL   N  I + + + I K   +  + +
Sbjct: 62  MSLYAGDYSDVKDCDVIVVTAGANRKPGETRLDLAKKNVMIAKEVTQNIMKYYNHGVILV 121
Query: 158 ISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRANTFVAEXXXXXXXXXXXXXXX 216
           +SNPV+    I   + +K       K++G  T+LD +R    ++E               
Sbjct: 122 VSNPVD----IITYMIQKWSGLPVGKVIGSGTVLDSIRFRYLLSEKLGVDVKNVHGYIIG 177
Query: 217 XHAGVTILPLLSQVK------------PPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGS 264
            H G + LPL S               P C+FT+E+ + +   ++  G  +++ K   G+
Sbjct: 178 EH-GDSQLPLWSCTHIAGKNINEYIDDPKCNFTEEDKKKIAEDVKTAGATIIKNK---GA 233
Query: 265 ATLSMAYAAVKFADACLRG---LRGDAGVVECAF-VASQVTELPFFASKVRLGRQGAEEI 320
               +A +     +  L+    +R    V+   + +      LP   +      +G +E+
Sbjct: 234 TYYGIAVSINTIVETLLKNQNTIRTVGTVINGMYGIEDVAISLPSIVNS-----EGVQEV 288
Query: 321 FQLGPLNEYE---RIGLEKAKKEL 341
            Q     E E   R   E+ KK L
Sbjct: 289 LQFNLTPEEEEALRFSAEQVKKVL 312

>pdb|2EWD|A Chain A, Crystal Structure Of The Lactate Dehydrogenase From Cryptosporidium Parvum Complexed With Substrate (Pyruvic Acid) And Cofactor Analog (3-Acetylpyridine Adenine Dinucleotide). Length = 317

Iteration: 1
 Score = 62.4 bits (150), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 51/162 (31%), Positives = 85/162 (52%), Gaps = 11/162 (6%)
Query: 44  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISH-MDTGAVVRGFLG 100
           K+A++G+ G IG  +A ++  + L  V+ L+D+      G   DI+H M         +G
Sbjct: 6   KIAVIGS-GQIGGNIAYIVGKDNLADVV-LFDIAEGIPQGKALDITHSMVMFGSTSKVIG 63
Query: 101 QPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISN 160
                + ++G D+VII A +P +P   R +L   NA I+ ++ EG+ K CPNA V  I+N
Sbjct: 64  TDDYAD-ISGSDVVIITASIPGRPKDDRSELLFGNARILDSVAEGVKKYCPNAFVICITN 122
Query: 161 PVNSTVPIAAEVFKKAGTYDPKKLLGVT-MLDVVRANTFVAE 201
           P++    +    F+K       K+ G+  +LD  R  TF+A+
Sbjct: 123 PLD----VMVSHFQKVSGLPHNKVCGMAGVLDSSRFRTFIAQ 160

>pdb|2FM3|A Chain A, Crystal Structure Of The Lactate Dehydrogenase From Cryptosporidium Parvum Complexed With Substrate (Pyruvic Acid) And Cofactor (B- Nicotinamide Adenine Dinucleotide) Length = 321

Iteration: 1
 Score = 62.4 bits (150), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 64/228 (28%), Positives = 105/228 (46%), Gaps = 22/228 (9%)
Query: 44  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISH-MDTGAVVRGFLG 100
           K+A++G+ G IG  +A ++  + L  V+ L+D+      G   DI+H M         +G
Sbjct: 6   KIAVIGS-GQIGGNIAYIVGKDNLADVV-LFDIAEGIPQGKALDITHSMVMFGSTSKVIG 63
Query: 101 QPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISN 160
                + ++G D+VII A +P +P   R +L   NA I+ ++ EG+ K CPNA V  I+N
Sbjct: 64  TNDYAD-ISGSDVVIITASIPGRPKDDRSELLFGNARILDSVAEGVKKYCPNAFVICITN 122
Query: 161 PVNSTVPIAAEVFKKAGTYDPKKLLGVT-MLDVVRANTFVAEXXXXXXXXXXXXXXXXHA 219
           P++    +    F+K       K+ G+  +LD  R  TF+A+                H 
Sbjct: 123 PLD----VMVSHFQKVSGLPHNKVCGMAGVLDSSRFRTFIAQHFGVNASDVSANVIGGH- 177
Query: 220 GVTILPLLSQVK----PPCSF------TQEETEYLTNRIQNGGTEVVE 257
           G  ++P  S V     P  SF      TQE+ + +    +    EV +
Sbjct: 178 GDGMVPATSSVSVGGVPLSSFIKQGLITQEQIDEIVCHTRIAWKEVAD 225

>pdb|1HYG|A Chain A, Crystal Structure Of Mj0490 Gene Product, The Family Of LactateMALATE DEHYDROGENASE Length = 313

Iteration: 1
 Score = 62.4 bits (150), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 62/234 (26%), Positives = 106/234 (45%), Gaps = 20/234 (8%)
Query: 43  FKVAILGAAGGIGQPLAMLMKINPLVSVLHL----YDVVNTPGVTADISHMDTGAVVRGF 98
            KV I+GA+G +G   A+L+   P +  L L    + +    G+  DI     G      
Sbjct: 1   MKVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDAN 60
Query: 99  LGQPQLEN--ALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVN 156
           +     EN   +   D+VII +GVPRK GM+R DL   NA IV    + IA+ C +  + 
Sbjct: 61  IYVESDENLRIIDESDVVIITSGVPRKEGMSRMDLAKTNAKIVGKYAKKIAEIC-DTKIF 119
Query: 157 LISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRANTFVAEXXXXXXXXXXXXXX 215
           +I+NPV+  +   A V  K   ++  ++ G+ T LD +R    +A+              
Sbjct: 120 VITNPVD-VMTYKALVDSK---FERNQVFGLGTHLDSLRFKVAIAKFFGVHIDEVRTRII 175
Query: 216 XXHAGVTILPLLSQ-------VKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGA 262
             H G +++PLLS        ++    F +   + +   ++  G +++  K G+
Sbjct: 176 GEH-GDSMVPLLSATSIGGIPIQKFERFKELPIDEIIEDVKTKGEQIIRLKGGS 228

>pdb|1OC4|A Chain A, Lactate Dehydrogenase From Plasmodium Berghei Length = 322

Iteration: 1
 Score = 62.0 bits (149), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 81/318 (25%), Positives = 143/318 (44%), Gaps = 36/318 (11%)
Query: 44  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVV-NTP-GVTADISHMDTGAVVRGFLGQ 101
           K+ ++G+ G IG  +A L+    L  V+ ++D+V N P G   D SH +  A     +  
Sbjct: 6   KIVLVGS-GMIGGVMATLIVQKNLGDVV-MFDIVKNMPHGKALDTSHTNVMAYSNCKVSG 63
Query: 102 PQLENALTGMDLVIIPAGVPRKPG-----MTRDDLFNINAGIVRTLCEGIAKCCPNATVN 156
               + L   D+VI+ AG  + PG       RDDL  +N  I+  +   I   CPNA + 
Sbjct: 64  SNTYDDLKDADVVIVTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKNNCPNAFII 123
Query: 157 LISNPVNSTVPIAAEVFKKAGTYDPK-KLLGV-TMLDVVRANTFVAEXXXXXXXXXXXXX 214
           +++NPV+  V +   + + +G   PK K++G+  +LD  R   ++++             
Sbjct: 124 VVTNPVDVMVQL---LHQHSGV--PKNKIVGLGGVLDTSRLKYYISQKLNVCPRDVNAHI 178
Query: 215 XXXHAGVTIL----------PLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGS 264
              H    +L          PL   +      T +E + + +R  N   E+V   A   S
Sbjct: 179 VGAHGNKMVLLKRYITVGGIPLQEFINNK-KITDQELDAIFDRTINTALEIVNLHA---S 234
Query: 265 ATLSMAYAAVKFADACLRGLRGDAGVVECA-FVASQVTELPFFA-SKVRLGRQGAEEIFQ 322
             ++ A A ++ A++ +R LR    V+ C+  +  Q      FA + + +G  G E++ +
Sbjct: 235 PYVAPAAAIIEMAESYIRDLR---KVLICSTLLEGQYGHKDIFAGTPLVIGGNGVEQVIE 291
Query: 323 LGPLNEYERIGLEKAKKE 340
           L  LN  E+   ++A  E
Sbjct: 292 L-QLNADEKKKFDEAVAE 308

>pdb|1CET|A Chain A, Chloroquine Binds In The Cofactor Binding Site Of Plasmodium Falciparum Lactate Dehydrogenase. Length = 316

Iteration: 1
 Score = 62.0 bits (149), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 83/318 (26%), Positives = 142/318 (44%), Gaps = 36/318 (11%)
Query: 44  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVV-NTP-GVTADISHMDTGAVVRGFLGQ 101
           K+ ++G+ G IG  +A L+    L  V+ L+D+V N P G   D SH +  A     +  
Sbjct: 6   KIVLVGS-GMIGGVMATLIVQKNLGDVV-LFDIVKNMPHGKALDTSHTNVMAYSNCKVSG 63
Query: 102 PQLENALTGMDLVIIPAGVPRKPG-----MTRDDLFNINAGIVRTLCEGIAKCCPNATVN 156
               + L G D+VI+ AG  + PG       R DL  +N  I+  +   I K CPNA + 
Sbjct: 64  SNTYDDLAGSDVVIVTAGFTKAPGKSDKEWNRLDLLPLNNKIMIEIGGHIKKNCPNAFII 123
Query: 157 LISNPVNSTVPIAAEVFKKAGTYDPK-KLLGV-TMLDVVRANTFVAEXXXXXXXXXXXXX 214
           +++NPV+  V +   + + +G   PK K++G+  +LD  R   ++++             
Sbjct: 124 VVTNPVDVMVQL---LHQHSGV--PKNKIIGLGGVLDTSRLKYYISQKLNVCPRDVNAHI 178
Query: 215 XXXHAGVTIL----------PLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGS 264
              H    +L          PL   +      +  E E + +R  N   E+V   A   S
Sbjct: 179 VGAHGNKMVLLKRYITVGGIPLQEFINNKL-ISDAELEAIFDRTVNTALEIVNLHA---S 234
Query: 265 ATLSMAYAAVKFADACLRGLRGDAGVVECA-FVASQVTELPFF-ASKVRLGRQGAEEIFQ 322
             ++ A A ++ A++ L+ L+    V+ C+  +  Q      F  + V LG  G E++ +
Sbjct: 235 PYVAPAAAIIEMAESYLKDLK---KVLICSTLLEGQYGHSDIFGGTPVVLGANGVEQVIE 291
Query: 323 LGPLNEYERIGLEKAKKE 340
           L  LN  E+   ++A  E
Sbjct: 292 L-QLNSEEKAKFDEAIAE 308

>pdb|1O6Z|A Chain A, 1.95 A Resolution Structure Of (r207s,r292s) Mutant Of Malate Dehydrogenase From The Halophilic Archaeon Haloarcula Marismortui (holo Form) Length = 303

Iteration: 1
 Score = 60.8 bits (146), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 75/280 (26%), Positives = 117/280 (41%), Gaps = 28/280 (10%)
Query: 78  NTPGVTADISH---MDTGAVVRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNI 134
           +T G  AD +H    D+   VR    Q   E+   G D+V+I AG+PR+PG TR DL   
Sbjct: 40  DTVGQAADTNHGIAYDSNTRVR----QGGYEDT-AGSDVVVITAGIPRQPGQTRIDLAGD 94
Query: 135 NAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVV 193
           NA I+  +   + +   +      SNPV+    +      +AG    ++++G    LD  
Sbjct: 95  NAPIMEDIQSSLDEHNDDYISLTTSNPVD----LLNRHLYEAGDRSREQVIGFGGRLDSA 150
Query: 194 RANTFVAEXXXXXXXXXXXXXXXXHAGVTILPLLSQVKPPCS---FTQEETEYLTNRIQN 250
           R    ++E                H G   +P+ S+V    +   F+ +E E L   +Q 
Sbjct: 151 RFRYVLSEEFDAPVQNVEGTILGEH-GDAQVPVFSKVSVDGTDPEFSGDEKEQLLGDLQE 209
Query: 251 GGTEVVEAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECAFVASQVT---ELPFFA 307
              +V+E K   G+     A       +A L     D G V  A V  +     E   F 
Sbjct: 210 SAMDVIERK---GATEWGPARGVAHMVEAILH----DTGEVLPASVKLEGEFGHEDTAFG 262
Query: 308 SKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSIQK 347
             V LG  G EEI +   L++YE+  +  A ++L+    K
Sbjct: 263 VPVSLGSNGVEEIVEW-DLDDYEQDLMADAAEKLSDQYDK 301

>pdb|2X0R|A Chain A, R207s,R292s Mutant Of Malate Dehydrogenase From The Halophilic Archaeon Haloarcula Marismortui (Holo Form) Length = 304

Iteration: 1
 Score = 60.8 bits (146), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 75/280 (26%), Positives = 117/280 (41%), Gaps = 28/280 (10%)
Query: 78  NTPGVTADISH---MDTGAVVRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNI 134
           +T G  AD +H    D+   VR    Q   E+   G D+V+I AG+PR+PG TR DL   
Sbjct: 41  DTVGQAADTNHGIAYDSNTRVR----QGGYEDT-AGSDVVVITAGIPRQPGQTRIDLAGD 95
Query: 135 NAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVV 193
           NA I+  +   + +   +      SNPV+    +      +AG    ++++G    LD  
Sbjct: 96  NAPIMEDIQSSLDEHNDDYISLTTSNPVD----LLNRHLYEAGDRSREQVIGFGGRLDSA 151
Query: 194 RANTFVAEXXXXXXXXXXXXXXXXHAGVTILPLLSQVKPPCS---FTQEETEYLTNRIQN 250
           R    ++E                H G   +P+ S+V    +   F+ +E E L   +Q 
Sbjct: 152 RFRYVLSEEFDAPVQNVEGTILGEH-GDAQVPVFSKVSVDGTDPEFSGDEKEQLLGDLQE 210
Query: 251 GGTEVVEAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECAFVASQVT---ELPFFA 307
              +V+E K   G+     A       +A L     D G V  A V  +     E   F 
Sbjct: 211 SAMDVIERK---GATEWGPARGVAHMVEAILH----DTGEVLPASVKLEGEFGHEDTAFG 263
Query: 308 SKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSIQK 347
             V LG  G EEI +   L++YE+  +  A ++L+    K
Sbjct: 264 VPVSLGSNGVEEIVEW-DLDDYEQDLMADAAEKLSDQYDK 302

>pdb|1T2E|A Chain A, Plasmodium Falciparum Lactate Dehydrogenase S245a, A327p Mutant Complexed With Nadh And Oxamate Length = 322

Iteration: 1
 Score = 60.1 bits (144), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 83/318 (26%), Positives = 143/318 (44%), Gaps = 36/318 (11%)
Query: 44  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVV-NTP-GVTADISHMDTGAVVRGFLGQ 101
           K+ ++G+ G IG  +A L+    L  V+ L+D+V N P G   D SH +  A     +  
Sbjct: 6   KIVLVGS-GMIGGVMATLIVQKNLGDVV-LFDIVKNMPHGKALDTSHTNVMAYSNCKVSG 63
Query: 102 PQLENALTGMDLVIIPAGVPRKPG-----MTRDDLFNINAGIVRTLCEGIAKCCPNATVN 156
               + L G D+VI+ AG  + PG       RDDL  +N  I+  +   I K CPNA + 
Sbjct: 64  SNTYDDLAGADVVIVTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKNCPNAFII 123
Query: 157 LISNPVNSTVPIAAEVFKKAGTYDPK-KLLGV-TMLDVVRANTFVAEXXXXXXXXXXXXX 214
           +++NPV+  V +   + + +G   PK K++G+  +LD  R   ++++             
Sbjct: 124 VVTNPVDVMVQL---LHQHSGV--PKNKIIGLGGVLDTSRLKYYISQKLNVCPRDVNAHI 178
Query: 215 XXXHAGVTIL----------PLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGS 264
              H    +L          PL   +      +  E E + +R  N   E+V   A   +
Sbjct: 179 VGAHGNKMVLLKRYITVGGIPLQEFINNKL-ISDAELEAIFDRTVNTALEIVNLHA---A 234
Query: 265 ATLSMAYAAVKFADACLRGLRGDAGVVECA-FVASQVTELPFF-ASKVRLGRQGAEEIFQ 322
             ++ A A ++ A++ L+ L+    V+ C+  +  Q      F  + V LG  G E++ +
Sbjct: 235 PYVAPAAAIIEMAESYLKDLK---KVLICSTLLEGQYGHSDIFGGTPVVLGANGVEQVIE 291
Query: 323 LGPLNEYERIGLEKAKKE 340
           L  LN  E+   ++A  E
Sbjct: 292 L-QLNSEEKAKFDEAIAE 308

>pdb|2X0I|A Chain A, 2.9 A Resolution Structure Of Malate Dehydrogenase From Archaeoglobus Fulgidus In Complex With Nadh Length = 294

Iteration: 1
 Score = 56.6 bits (135), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 40/147 (27%), Positives = 68/147 (46%), Gaps = 16/147 (10%)
Query: 51  AGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQL-----E 105
           AG +G   A    +N  V  + L D+     V      MD      G    P++      
Sbjct: 8   AGRVGSTSAFTCLLNLDVDEIALVDIAEDLAVG---EAMDLAHAAAGIDKYPKIVGGADY 64
Query: 106 NALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNST 165
           + L G +++++ AG+ RKPGMTR DL + NAGI++ + + I +  P + + +++NP++  
Sbjct: 65  SLLKGSEIIVVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVTNPMDVM 124
Query: 166 VPIAA--------EVFKKAGTYDPKKL 184
             I          EVF      D ++L
Sbjct: 125 TYIMWKESGKPRNEVFGMGNQLDSQRL 151

>pdb|4H7P|A Chain A, Crystal Structure Of A Putative Cytosolic Malate Dehydrogenase From Leishmania Major Friedlin Length = 345

Iteration: 1
 Score = 52.8 bits (125), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 51/190 (26%), Positives = 82/190 (43%), Gaps = 33/190 (17%)
Query: 31  QAKCRAKGGAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMD 90
           +A+ +  G  +  KVA+ GAAG IG  L  L+    L+           P    ++  +D
Sbjct: 13  EAQTQGPGSMSAVKVAVTGAAGQIGYALVPLIARGALLG----------PTTPVELRLLD 62
Query: 91  TGAVVRGFLG-QPQLEN-----------------ALTGMDLVIIPAGVPRKPGMTRDDLF 132
               ++   G + +LE+                 A  G+ + I+    PRK GM R DL 
Sbjct: 63  IEPALKALAGVEAELEDCAFPLLDKVVVTADPRVAFDGVAIAIMCGAFPRKAGMERKDLL 122
Query: 133 NINAGIVRTLCEGIAK-CCPNATVNLISNPVNSTVPIAAEVFKKA-GTYDPKKLLGVTML 190
            +NA I +   E IA     +  V ++ NP N+   I   + K A G  +P+ +  +T L
Sbjct: 123 EMNARIFKEQGEAIAAVAASDCRVVVVGNPANTNALI---LLKSAQGKLNPRHVTAMTRL 179
Query: 191 DVVRANTFVA 200
           D  RA + +A
Sbjct: 180 DHNRALSLLA 189

>pdb|1LLC|A Chain A, Structure Determination Of The Allosteric L-Lactate Dehydrogenase From Lactobacillus Casei At 3.0 Angstroms Resolution Length = 325

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 55/244 (22%), Positives = 104/244 (42%), Gaps = 26/244 (10%)
Query: 112 DLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAE 171
           DLV+I AG P++PG TR DL N N  I++++ + I     N    + +NPV+    I   
Sbjct: 77  DLVVITAGAPKQPGETRLDLVNKNLKILKSIVDPIVDSGFNLIFLVAANPVD----ILTY 132
Query: 172 VFKKAGTYDPKKLLGV-TMLDVVRANTFVAEXXXXXXXXXXXXXXXXHAGVTILPLLSQ- 229
              K   +   +++G  T LD  R    +AE                H G T  P+ S  
Sbjct: 133 ATWKLSGFPKNRVVGSGTSLDTARFRQSIAEMVNVDARSVHAYIMGEH-GDTEFPVWSHA 191
Query: 230 ----------VKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADA 279
                     VK      +++   +   +++   E+++ K   G+    +A A  + + A
Sbjct: 192 NIGGVTIAEWVKAHPEIKEDKLVKMFEDVRDAAYEIIKLK---GATFYGIATALARISKA 248
Query: 280 CLRGLRGDAGVVECAFVASQ--VTELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKA 337
            L     +A +    ++  Q  + +L +  +   + R G + I ++ PL ++E   ++K+
Sbjct: 249 ILND--ENAVLPLSVYMDGQYGINDL-YIGTPAVINRNGIQNILEI-PLTDHEEESMQKS 304
Query: 338 KKEL 341
             +L
Sbjct: 305 ASQL 308

>pdb|2ZQY|A Chain A, T-State Structure Of Allosteric L-Lactate Dehydrogenase From Lactobacillus Casei Length = 326

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 55/244 (22%), Positives = 104/244 (42%), Gaps = 26/244 (10%)
Query: 112 DLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAE 171
           DLV+I AG P+KPG TR DL N N  I++++ + I     N    + +NPV+    I   
Sbjct: 78  DLVVITAGAPQKPGETRLDLVNKNLKILKSIVDPIVDSGFNGIFLVAANPVD----ILTY 133
Query: 172 VFKKAGTYDPKKLLGV-TMLDVVRANTFVAEXXXXXXXXXXXXXXXXHAGVTILPLLSQ- 229
              K   +   +++G  T LD  R    +AE                H G T  P+ S  
Sbjct: 134 ATWKLSGFPKNRVVGSGTSLDTARFRQSIAEMVNVDARSVHAYIMGEH-GDTEFPVWSHA 192
Query: 230 ----------VKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADA 279
                     VK      +++   +   +++   E+++ K   G+    +A A  + + A
Sbjct: 193 NIGGVTIAEWVKAHPEIKEDKLVKMFEDVRDAAYEIIKLK---GATFYGIATALARISKA 249
Query: 280 CLRGLRGDAGVVECAFVASQ--VTELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKA 337
            L     +A +    ++  Q  + ++ +  +   + R G + I ++ PL ++E   ++K+
Sbjct: 250 ILND--ENAVLPLSVYMDGQYGLNDI-YIGTPAVINRNGIQNILEI-PLTDHEEESMQKS 305
Query: 338 KKEL 341
             +L
Sbjct: 306 ASQL 309

>pdb|3VKU|A Chain A, Penta Mutant Of Lactobacillus Casei Lactate Dehydrogenase Length = 326

Iteration: 1
 Score = 49.3 bits (116), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 55/244 (22%), Positives = 104/244 (42%), Gaps = 26/244 (10%)
Query: 112 DLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAE 171
           DLV+I AG P+KPG TR DL N N  I++++ + I     N    + +NPV+    I   
Sbjct: 78  DLVVITAGAPQKPGETRLDLVNKNLKILKSIVDPIVDSGFNGIFLVAANPVD----ILTY 133
Query: 172 VFKKAGTYDPKKLLGV-TMLDVVRANTFVAEXXXXXXXXXXXXXXXXHAGVTILPLLSQ- 229
              K   +   +++G  T LD  R    +A+                H G T  P+ S  
Sbjct: 134 ATWKLSGFPKNRVVGSGTSLDTARFRQSIAKMVNVDARSVHAYIMGEH-GDTEFPVWSHA 192
Query: 230 ----------VKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADA 279
                     VK      +++   +   ++N   E+++ K   G+    +A A  + + A
Sbjct: 193 NIGGVTIAEWVKAHPEIKEDKLVKMFEDVRNKAYEIIKLK---GATFYGIATALARISKA 249
Query: 280 CLRGLRGDAGVVECAFVASQ--VTELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKA 337
            L     +A +    ++  Q  + ++ +  +   + R G + I ++ PL ++E   ++K+
Sbjct: 250 ILND--ENAVLPLSVYMDGQYGLNDI-YIGTPAVINRNGIQNILEI-PLTDHEEESMQKS 305
Query: 338 KKEL 341
             +L
Sbjct: 306 ASQL 309

>pdb|2LDX|A Chain A, Characterization Of The Antigenic Sites On The Refined 3- Angstroms Resolution Structure Of Mouse Testicular Lactate Dehydrogenase C4 Length = 331

Iteration: 1
 Score = 48.1 bits (113), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 71/326 (21%), Positives = 128/326 (39%), Gaps = 33/326 (10%)
Query: 44  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQ 103
           K+ ++G  G +G   A+ + +  L   L L D  +T  +  +   +  G++   FL  P+
Sbjct: 21  KITVVGV-GDVGMACAISILLKGLADELALVDA-DTDKLRGEALDLQHGSL---FLSTPK 75
Query: 104 L-----ENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLI 158
           +      N      LVII AG     G TR DL   N  I++ +  G+ +  P+  + ++
Sbjct: 76  IVFGKDYNVSANSKLVIITAGARMVSGQTRLDLLQRNVAIMKAIVPGVIQNSPDCKIIVV 135
Query: 159 SNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRANTFVAEXXXXXXXXXXXXXXXX 217
           +NPV+    I   V  K   +   +++G    LD  R    + E                
Sbjct: 136 TNPVD----ILTYVVWKISGFPVGRVIGSGCNLDSARFRYLIGEKLGVNPTSCHGWVLGE 191
Query: 218 HAGVTILPLLSQVK---------PPCSFTQEETEYLTN---RIQNGGTEVVEAKAGAGSA 265
           H G + +P+ S V           P   T +  ++  N   ++  GG EV++ K   G  
Sbjct: 192 H-GDSSVPIWSGVNVAGVTLKSLNPAIGTDKNKQHWKNVHKQVVEGGYEVLDMK---GYT 247
Query: 266 TLSMAYAAVKFADACLRGLRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQLGP 325
           + ++  +    A + L+ L+    V         + E  F +    LG  G  +  ++  
Sbjct: 248 SWAIGLSVTDLARSILKNLKRVHPVTTLVKGFHGIKEEVFLSIPCVLGESGITDFVKVNM 307
Query: 326 LNEYERIGLEKAKKELAGSIQKGISF 351
             E E  GL K   +   ++QK +  
Sbjct: 308 TAEEE--GLLKKSADTLWNMQKNLEL 331

>pdb|2V6B|A Chain A, Crystal Structure Of Lactate Dehydrogenase From Deinococcus Radiodurans (Apo Form) Length = 304

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 24/68 (35%), Positives = 37/68 (54%)
Query: 105 ENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNS 164
            + L    +VI+ AG  +KPG +R DL   NA I R L   I +  P+A + + SNPV+ 
Sbjct: 62  HSELADAQVVILTAGANQKPGESRLDLLEKNADIFRELVPQITRAAPDAVLLVTSNPVDL 121
Query: 165 TVPIAAEV 172
              +A ++
Sbjct: 122 LTDLATQL 129

>pdb|1BMD|A Chain A, Determinants Of Protein Thermostability Observed In The 1.9 Angstroms Crystal Structure Of Malate Dehydrogenase From The Thermophilic Bacterium Thermus Flavus Length = 327

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 47/173 (27%), Positives = 73/173 (42%), Gaps = 18/173 (10%)
Query: 41  AGFKVAILGAAGGIGQPL-------AMLMKINPLVSVLHLYDVVNT----PGVTADISHM 89
           A  +VA+ GAAG IG  L        ML K  P+  +L L ++        GV  ++   
Sbjct: 3   APVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPV--ILQLLEIPQAMKALEGVVMELEDC 60
Query: 90  DTGAVVRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKC 149
               ++ G       + A    D  ++    PRK GM R DL  +N  I       +A+ 
Sbjct: 61  -AFPLLAGLEATDDPDVAFKDADYALLVGAAPRKAGMERRDLLQVNGKIFTEQGRALAEV 119
Query: 150 C-PNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAE 201
              +  V ++ NP N+   IA   +K A   +P+    +T LD  RA   +A+
Sbjct: 120 AKKDVKVLVVGNPANTNALIA---YKNAPGLNPRNFTAMTRLDHNRAKAQLAK 169

>pdb|1BDM|A Chain A, The Structure At 1.8 Angstroms Resolution Of A Single Site Mutant (T189i) Of Malate Dehydrogenase From Thermus Flavus With Increased Enzymatic Activity Length = 327

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 47/173 (27%), Positives = 73/173 (42%), Gaps = 18/173 (10%)
Query: 41  AGFKVAILGAAGGIGQPL-------AMLMKINPLVSVLHLYDVVNT----PGVTADISHM 89
           A  +VA+ GAAG IG  L        ML K  P+  +L L ++        GV  ++   
Sbjct: 3   APVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPV--ILQLLEIPQAMKALEGVVMELEDC 60
Query: 90  DTGAVVRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKC 149
               ++ G       + A    D  ++    PRK GM R DL  +N  I       +A+ 
Sbjct: 61  -AFPLLAGLEATDDPDVAFKDADYALLVGAAPRKAGMERRDLLQVNGKIFTEQGRALAEV 119
Query: 150 C-PNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAE 201
              +  V ++ NP N+   IA   +K A   +P+    +T LD  RA   +A+
Sbjct: 120 AKKDVKVLVVGNPANTNALIA---YKNAPGLNPRNFTAMTRLDHNRAKAQLAK 169

>pdb|3H3F|A Chain A, Rabbit Muscle L-Lactate Dehydrogenase In Complex With Nadh And Oxamate Length = 331

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 73/332 (21%), Positives = 136/332 (40%), Gaps = 45/332 (13%)
Query: 44  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP--GVTADISHMDTGAVVRGFLGQ 101
           K+ ++G  G +G   A+ + +  L   L L DV+     G   D+ H   G++   FL  
Sbjct: 21  KITVVGV-GAVGMACAISILMKDLADELALVDVMEDKLKGEMMDLQH---GSL---FLRT 73
Query: 102 PQLENALTGMD--------LVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNA 153
           P++   ++G D        LVII AG  ++ G +R +L   N  I + +   + K  P+ 
Sbjct: 74  PKI---VSGKDYSVTANSKLVIITAGARQQEGESRLNLVQRNVNIFKFIIPNVVKYSPHC 130
Query: 154 TVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRANTFVAEXXXXXXXXXXX 212
            + ++SNPV+    I   V  K   +   +++G    LD  R    + E           
Sbjct: 131 KLLVVSNPVD----ILTYVAWKISGFPKNRVIGSGCNLDSARFRYLMGERLGVHALSCHG 186
Query: 213 XXXXXH-------------AGVTILPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAK 259
                H             AGV++  L  ++       +E+ + +  ++ +   EV++ K
Sbjct: 187 WILGEHGDSSVPVWSGMNVAGVSLKTLHPELGTDAD--KEQWKQVHKQVVDSAYEVIKLK 244
Query: 260 AGAGSATLSMAYAAVKFADACLRGLRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEE 319
              G  T ++  +    A++ ++ LR    +         + E  F +    LG+ G  +
Sbjct: 245 ---GYTTWAIGLSVADLAESIMKNLRRVHPISTMLKGLYGIKEDVFLSVPCVLGQNGISD 301
Query: 320 IFQLGPLNEYERIGLEKAKKELAGSIQKGISF 351
           + ++  L   E   L+K+   L G IQK + F
Sbjct: 302 VVKV-TLTSEEEAHLKKSADTLWG-IQKELQF 331

>pdb|1LLD|A Chain A, Molecular Basis Of Allosteric Activation Of Bacterial L-Lactate Dehydrogenase Length = 319

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 30/91 (32%), Positives = 46/91 (50%), Gaps = 5/91 (5%)
Query: 112 DLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAE 171
           D+V+I AG  +KPG +R +L      I++ +   + K  PNA   LI+NPV+    IA  
Sbjct: 77  DMVVITAGPRQKPGQSRLELVGATVNILKAIMPNLVKVAPNAIYMLITNPVD----IATH 132
Query: 172 VFKKAGTYDPKKLLGV-TMLDVVRANTFVAE 201
           V +K       ++ G  T LD  R    +A+
Sbjct: 133 VAQKLTGLPENQIFGSGTNLDSARLRFLIAQ 163

>pdb|1IZ9|A Chain A, Crystal Structure Of Malate Dehydrogenase From Thermus Thermophilus Hb8 Length = 327

Iteration: 1
 Score = 46.2 bits (108), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 47/173 (27%), Positives = 73/173 (42%), Gaps = 18/173 (10%)
Query: 41  AGFKVAILGAAGGIGQPL-------AMLMKINPLVSVLHLYDVVNT----PGVTADISHM 89
           A  +VA+ GAAG IG  L        ML K  P+  +L L ++        GV  ++   
Sbjct: 3   APVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPV--ILQLLEIPQAMKALEGVVMELEDC 60
Query: 90  DTGAVVRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKC 149
               ++ G       + A    D  ++    PRK GM R DL  +N  I       +A+ 
Sbjct: 61  -AFPLLAGLEATDDPKVAFKDADYALLVGAAPRKAGMERRDLLQVNGKIFTEQGRALAEV 119
Query: 150 C-PNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAE 201
              +  V ++ NP N+   IA   +K A   +P+    +T LD  RA   +A+
Sbjct: 120 AKKDVKVLVVGNPANTNALIA---YKNAPGLNPRNFTAMTRLDHNRAKAQLAK 169

>pdb|1I10|A Chain A, Human Muscle L-Lactate Dehydrogenase M Chain, Ternary Complex With Nadh And Oxamate Length = 331

Iteration: 1
 Score = 46.2 bits (108), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 71/328 (21%), Positives = 133/328 (40%), Gaps = 37/328 (11%)
Query: 44  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP--GVTADISHMDTGAVVRGFLGQ 101
           K+ ++G  G +G   A+ + +  L   L L DV+     G   D+ H   G++   FL  
Sbjct: 21  KITVVGV-GAVGMACAISILMKDLADELALVDVIEDKLKGEMMDLQH---GSL---FLRT 73
Query: 102 PQL-----ENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVN 156
           P++      N      LVII AG  ++ G +R +L   N  I + +   + K  PN  + 
Sbjct: 74  PKIVSGKDYNVTANSKLVIITAGARQQEGESRLNLVQRNVNIFKFIIPNVVKYSPNCKLL 133
Query: 157 LISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRANTFVAEXXXXXXXXXXXXXX 215
           ++SNPV+    I   V  K   +   +++G    LD  R    + E              
Sbjct: 134 IVSNPVD----ILTYVAWKISGFPKNRVIGSGCNLDSARFRYLMGERLGVHPLSCHGWVL 189
Query: 216 XXHAGVTILPLLS----------QVKPPCSFTQEETEY--LTNRIQNGGTEVVEAKAGAG 263
             H G + +P+ S           + P     +++ ++  +  ++     EV++ K   G
Sbjct: 190 GEH-GDSSVPVWSGMNVAGVSLKTLHPDLGTDKDKEQWKEVHKQVVESAYEVIKLK---G 245
Query: 264 SATLSMAYAAVKFADACLRGLRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQL 323
             + ++  +    A++ ++ LR    V         + +  F +    LG+ G  ++ ++
Sbjct: 246 YTSWAIGLSVADLAESIMKNLRRVHPVSTMIKGLYGIKDDVFLSVPCILGQNGISDLVKV 305
Query: 324 GPLNEYERIGLEKAKKELAGSIQKGISF 351
             L   E   L+K+   L G IQK + F
Sbjct: 306 -TLTSEEEARLKKSADTLWG-IQKELQF 331

>pdb|4AJP|A Chain A, Human Ldha In Complex With 2-((4-(4-((3-((2-Methyl-1,3- Benzothiazol-6yl)amino)-3-Oxo-Propyl)amino)-4-Oxo-Butyl) Phenyl)methyl)propanedioic Acid Length = 337

Iteration: 1
 Score = 46.2 bits (108), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 71/328 (21%), Positives = 133/328 (40%), Gaps = 37/328 (11%)
Query: 44  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP--GVTADISHMDTGAVVRGFLGQ 101
           K+ ++G  G +G   A+ + +  L   L L DV+     G   D+ H   G++   FL  
Sbjct: 21  KITVVGV-GAVGMACAISILMKDLADELALVDVIEDKLKGEMMDLQH---GSL---FLRT 73
Query: 102 PQL-----ENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVN 156
           P++      N      LVII AG  ++ G +R +L   N  I + +   + K  PN  + 
Sbjct: 74  PKIVSGKDYNVTANSKLVIITAGARQQEGESRLNLVQRNVNIFKFIIPNVVKYSPNCKLL 133
Query: 157 LISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRANTFVAEXXXXXXXXXXXXXX 215
           ++SNPV+    I   V  K   +   +++G    LD  R    + E              
Sbjct: 134 IVSNPVD----ILTYVAWKISGFPKNRVIGSGCNLDSARFRYLMGERLGVHPLSCHGWVL 189
Query: 216 XXHAGVTILPLLS----------QVKPPCSFTQEETEY--LTNRIQNGGTEVVEAKAGAG 263
             H G + +P+ S           + P     +++ ++  +  ++     EV++ K   G
Sbjct: 190 GEH-GDSSVPVWSGMNVAGVSLKTLHPDLGTDKDKEQWKEVHKQVVESAYEVIKLK---G 245
Query: 264 SATLSMAYAAVKFADACLRGLRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQL 323
             + ++  +    A++ ++ LR    V         + +  F +    LG+ G  ++ ++
Sbjct: 246 YTSWAIGLSVADLAESIMKNLRRVHPVSTMIKGLYGIKDDVFLSVPCILGQNGISDLVKV 305
Query: 324 GPLNEYERIGLEKAKKELAGSIQKGISF 351
             L   E   L+K+   L G IQK + F
Sbjct: 306 -TLTSEEEARLKKSADTLWG-IQKELQF 331

>pdb|1LDN|A Chain A, Structure Of A Ternary Complex Of An Allosteric Lactate Dehydrogenase From Bacillus Stearothermophilus At 2.5 Angstroms Resolution Length = 316

Iteration: 1
 Score = 45.8 bits (107), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 51/201 (25%), Positives = 81/201 (40%), Gaps = 27/201 (13%)
Query: 112 DLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAE 171
           DLV+I AG  +KPG TR DL + N  I R++ E +          + +NPV+    +   
Sbjct: 76  DLVVICAGANQKPGETRLDLVDKNIAIFRSIVESVMASGFQGLFLVATNPVD---ILTYA 132
Query: 172 VFKKAGTYDPKKLLGVTMLDVVRANTFVAEXXXXXXXXXXXXXXXXHAGVTILPLLSQ-- 229
            +K +G    + +   T+LD  R    + E                H G T LP+ SQ  
Sbjct: 133 TWKFSGLPHERVIGSGTILDTARFRFLLGEYFSVAPQNVHAYIIGEH-GDTELPVWSQAY 191
Query: 230 ---------VKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFA--- 277
                    V+      Q++ E +   +++   +++E K GA    ++M  A V  A   
Sbjct: 192 IGVMPIRKLVESKGEEAQKDLERIFVNVRDAAYQIIE-KKGATYYGIAMGLARVTRAILH 250
Query: 278 --------DACLRGLRGDAGV 290
                    A L GL G+  V
Sbjct: 251 NENAILTVSAYLDGLYGERDV 271

>pdb|1LDB|A Chain A, Structure Determination And Refinement Of Bacillus Stearothermophilus Lactate Dehydrogenase Length = 317

Iteration: 1
 Score = 45.8 bits (107), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 51/201 (25%), Positives = 81/201 (40%), Gaps = 27/201 (13%)
Query: 112 DLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAE 171
           DLV+I AG  +KPG TR DL + N  I R++ E +          + +NPV+    +   
Sbjct: 76  DLVVICAGANQKPGETRLDLVDKNIAIFRSIVESVMASGFQGLFLVATNPVD---ILTYA 132
Query: 172 VFKKAGTYDPKKLLGVTMLDVVRANTFVAEXXXXXXXXXXXXXXXXHAGVTILPLLSQ-- 229
            +K +G    + +   T+LD  R    + E                H G T LP+ SQ  
Sbjct: 133 TWKFSGLPHERVIGSGTILDTARFRFLLGEYFSVAPQNVHAYIIGEH-GDTELPVWSQAY 191
Query: 230 ---------VKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFA--- 277
                    V+      Q++ E +   +++   +++E K GA    ++M  A V  A   
Sbjct: 192 IGVMPIRKLVESKGEEAQKDLERIFVNVRDAAYQIIE-KKGATYYGIAMGLARVTRAILH 250
Query: 278 --------DACLRGLRGDAGV 290
                    A L GL G+  V
Sbjct: 251 NENAILTVSAYLDGLYGERDV 271

>pdb|1WZE|A Chain A, Structural Basis For Alteration Of Cofactor Specificity Of Malate Dehydrogenase From Thermus Flavus Length = 327

Iteration: 1
 Score = 44.7 bits (104), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 45/168 (26%), Positives = 72/168 (42%), Gaps = 14/168 (8%)
Query: 44  KVAILGAAGGIGQPL-------AMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGA--V 94
           +VA+ GAAG IG  L        ML K  P++  L L    +   +   +  ++  A  +
Sbjct: 6   RVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQL-LGSERSFQALEGVVMELEDCAFPL 64
Query: 95  VRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNA 153
           + G       + A    D  ++    PRK GM R DL  +N  I       +A+    + 
Sbjct: 65  LAGLEATDDPKVAFKDADYALLVGAAPRKAGMERRDLLQVNGKIFTEQGRALAEVAKKDV 124
Query: 154 TVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAE 201
            V ++ NP N+   IA   +K A   +P+    +T LD  RA   +A+
Sbjct: 125 KVLVVGNPANTNALIA---YKNAPGLNPRNFTAMTRLDHNRAKAQLAK 169

>pdb|2E37|A Chain A, Structure Of Tt0471 Protein From Thermus Thermophilus Length = 310

Iteration: 1
 Score = 44.7 bits (104), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 28/95 (29%), Positives = 50/95 (52%), Gaps = 5/95 (5%)
Query: 108 LTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVP 167
           L G   V++ AGV ++PG TR  L + NA +   +   + +  P A + + +NPV+    
Sbjct: 65  LEGARAVVLAAGVAQRPGETRLQLLDRNAQVFAQVVPRVLEAAPEAVLLVATNPVDVXTQ 124
Query: 168 IAAEVFKKAGTYDPKKLLGV-TMLDVVRANTFVAE 201
           +A   ++ +G   P +++G  T+LD  R    +AE
Sbjct: 125 VA---YRLSGL-PPGRVVGSGTILDTARFRALLAE 155

>pdb|4A73|A Chain A, Single Point Mutant Of Thermus Thermophilus Lactate Dehydrogenase Length = 310

Iteration: 1
 Score = 44.3 bits (103), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 28/95 (29%), Positives = 50/95 (52%), Gaps = 5/95 (5%)
Query: 108 LTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVP 167
           L G   V++ AGV ++PG TR  L + NA +   +   + +  P A + + +NPV+    
Sbjct: 65  LEGARAVVLAAGVAQRPGETRLQLLDRNAQVFAQVVPRVLEAAPEAVLLVATNPVDVMTQ 124
Query: 168 IAAEVFKKAGTYDPKKLLGV-TMLDVVRANTFVAE 201
           +A   ++ +G   P +++G  T+LD  R    +AE
Sbjct: 125 VA---YRLSGL-PPGRVVGSGTILDTARFRALLAE 155

>pdb|9LDT|A Chain A, Design And Synthesis Of New Enzymes Based On The Lactate Dehydrogenase Framework Length = 332

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 73/328 (22%), Positives = 132/328 (40%), Gaps = 37/328 (11%)
Query: 44  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP--GVTADISHMDTGAVVRGFLGQ 101
           K+ ++G  G +G   A+ + +  L   + L DV+     G   D+ H   G++   FL  
Sbjct: 22  KITVVGV-GAVGMACAISILMKELADEIALVDVMEDKLKGEMMDLQH---GSL---FLRT 74
Query: 102 PQL-----ENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVN 156
           P++      N      LV+I AG  ++ G +R +L   N  I + +   I K  PN  + 
Sbjct: 75  PKIVSGKDYNVTANSRLVVITAGARQQEGESRLNLVQRNVNIFKFIIPNIVKYSPNCKLL 134
Query: 157 LISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRANTFVAEXXXXXXXXXXXXXX 215
           ++SNPV+    I   V  K   +   +++G    LD  R    + E              
Sbjct: 135 VVSNPVD----ILTYVAWKISGFPKNRVIGSGCNLDSARFRYLMGERLGVHPLSCHGWIL 190
Query: 216 XXHAGVTILPLLSQVK---------PPCSFTQEETEY---LTNRIQNGGTEVVEAKAGAG 263
             H G + +P+ S V           P   T  + E+   +   + +   EV++ K   G
Sbjct: 191 GEH-GDSSVPVWSGVNVAGVSLKNLHPELGTDADKEHWKAVHKEVVDSAYEVIKLK---G 246
Query: 264 SATLSMAYAAVKFADACLRGLRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQL 323
             + ++  +    A++ ++ LR    +         + E  F +    LG+ G  ++ ++
Sbjct: 247 YTSWAIGLSVADLAESIMKNLRRVHPISTMIKGLYGIKENVFLSVPCILGQNGISDVVKV 306
Query: 324 GPLNEYERIGLEKAKKELAGSIQKGISF 351
             L   E   L+K+   L G IQK + F
Sbjct: 307 -TLTPEEEAHLKKSADTLWG-IQKELQF 332

>pdb|2V6M|A Chain A, Crystal Structure Of Lactate Dehydrogenase From Thermus Thermophilus Hb8 (Apo Form) Length = 310

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 28/95 (29%), Positives = 50/95 (52%), Gaps = 5/95 (5%)
Query: 108 LTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVP 167
           L G   V++ AGV ++PG TR  L + NA +   +   + +  P A + + +NPV+    
Sbjct: 65  LEGARAVVLAAGVAQRPGETRLQLLDRNAQVFAQVVPRVLEAAPEAVLLVATNPVDVMTQ 124
Query: 168 IAAEVFKKAGTYDPKKLLGV-TMLDVVRANTFVAE 201
           +A   ++ +G   P +++G  T+LD  R    +AE
Sbjct: 125 VA---YRLSGL-PPGRVVGSGTILDTARFRALLAE 155

>pdb|4AJ1|A Chain A, Rat Ldha In Complex With N-(2-(Methylamino)-1,3- Benzothiazol-6-Yl)acetamide Length = 331

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 71/329 (21%), Positives = 133/329 (40%), Gaps = 39/329 (11%)
Query: 44  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP--GVTADISHMDTGAVVRGFLGQ 101
           K+ ++G  G +G   A+ + +  L   L L DV+     G   D+ H   G++   FL  
Sbjct: 21  KITVVGV-GAVGMACAISILMKDLADELALVDVIEDKLKGEMMDLQH---GSL---FLKT 73
Query: 102 PQLENA-----LTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVN 156
           P++ ++          LVII AG  ++ G +R +L   N  I + +   + K  P   + 
Sbjct: 74  PKIVSSKDYSVTANSKLVIITAGARQQEGESRLNLVQRNVNIFKFIIPNVVKYSPQCKLL 133
Query: 157 LISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRANTFVAEXXXXXXXXXXXXXX 215
           ++SNPV+    I   V  K   +   +++G    LD  R    + E              
Sbjct: 134 IVSNPVD----ILTYVAWKISGFPKNRVIGSGCNLDSARFRYLMGERLGVHPLSCHGWVL 189
Query: 216 XXH-------------AGVTILPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGA 262
             H             AGV++  L  Q+       +E+ + +  ++ +   EV++ K   
Sbjct: 190 GEHGDSSVPVWSGVNVAGVSLKSLNPQLGTDAD--KEQWKDVHKQVVDSAYEVIKLK--- 244
Query: 263 GSATLSMAYAAVKFADACLRGLRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQ 322
           G  + ++  +    A++ ++ LR    +         + E  F +    LG+ G  ++ +
Sbjct: 245 GYTSWAIGLSVADLAESIMKNLRRVHPISTMIKGLYGIKEDVFLSVPCILGQNGISDVVK 304
Query: 323 LGPLNEYERIGLEKAKKELAGSIQKGISF 351
           +  L   E   L+K+   L G IQK + F
Sbjct: 305 V-TLTPDEEARLKKSADTLWG-IQKELQF 331

>pdb|4AJ4|A Chain A, Rat Ldha In Complex With 4-((2-Allylsulfanyl-1,3-Benzothizol-6-Yl) Amino)-4-Oxo-Butanoic Acid Length = 332

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 71/329 (21%), Positives = 133/329 (40%), Gaps = 39/329 (11%)
Query: 44  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP--GVTADISHMDTGAVVRGFLGQ 101
           K+ ++G  G +G   A+ + +  L   L L DV+     G   D+ H   G++   FL  
Sbjct: 22  KITVVGV-GAVGMACAISILMKDLADELALVDVIEDKLKGEMMDLQH---GSL---FLKT 74
Query: 102 PQLENA-----LTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVN 156
           P++ ++          LVII AG  ++ G +R +L   N  I + +   + K  P   + 
Sbjct: 75  PKIVSSKDYSVTANSKLVIITAGARQQEGESRLNLVQRNVNIFKFIIPNVVKYSPQCKLL 134
Query: 157 LISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRANTFVAEXXXXXXXXXXXXXX 215
           ++SNPV+    I   V  K   +   +++G    LD  R    + E              
Sbjct: 135 IVSNPVD----ILTYVAWKISGFPKNRVIGSGCNLDSARFRYLMGERLGVHPLSCHGWVL 190
Query: 216 XXH-------------AGVTILPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGA 262
             H             AGV++  L  Q+       +E+ + +  ++ +   EV++ K   
Sbjct: 191 GEHGDSSVPVWSGVNVAGVSLKSLNPQLGTDAD--KEQWKDVHKQVVDSAYEVIKLK--- 245
Query: 263 GSATLSMAYAAVKFADACLRGLRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQ 322
           G  + ++  +    A++ ++ LR    +         + E  F +    LG+ G  ++ +
Sbjct: 246 GYTSWAIGLSVADLAESIMKNLRRVHPISTMIKGLYGIKEDVFLSVPCILGQNGISDVVK 305
Query: 323 LGPLNEYERIGLEKAKKELAGSIQKGISF 351
           +  L   E   L+K+   L G IQK + F
Sbjct: 306 V-TLTPDEEARLKKSADTLWG-IQKELQF 332

>pdb|2XXB|A Chain A, Penta-Mutant Of Thermus Thermophilus Lactate Dehydrogenase, Complex With Amp Length = 310

Iteration: 1
 Score = 42.7 bits (99), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 28/95 (29%), Positives = 49/95 (51%), Gaps = 5/95 (5%)
Query: 108 LTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVP 167
           L G   V++ AGV ++PG TR  L + NA +   +   + +  P A + + +NPV+    
Sbjct: 65  LEGARAVVLAAGVAQRPGETRLQLLDRNAQVFAQVVPRVLEAAPEAVLLVATNPVDVMTQ 124
Query: 168 IAAEVFKKAGTYDPKKLLGV-TMLDVVRANTFVAE 201
           +A   +  +G   P +++G  T+LD  R    +AE
Sbjct: 125 VA---YALSGL-PPGRVVGSGTILDTARFRALLAE 155

>pdb|3PQD|A Chain A, Crystal Structure Of L-Lactate Dehydrogenase From Bacillus Subtilis Complexed With Fbp And Nad+ Length = 326

Iteration: 1
 Score = 42.4 bits (98), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 58/247 (23%), Positives = 101/247 (40%), Gaps = 26/247 (10%)
Query: 44  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQ 103
           KVA++GA G +G   A  +    +   L + DV N      D+  ++ G   + F  QP 
Sbjct: 7   KVALIGA-GFVGSSYAFALINQGITDELVVIDV-NKEKAMGDVMDLNHG---KAFAPQPV 61
Query: 104 LENALT-----GMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLI 158
             +  T       D+V I AG  +KPG TR +L   N  I + +   +     +    + 
Sbjct: 62  KTSYGTYEDCKDADIVCICAGANQKPGETRLELVEKNLKIFKGIVSEVMASGFDGIFLVA 121
Query: 159 SNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEXXXXXXXXXXXXXXXXH 218
           +NPV+    +    +K +G    + +   T LD  R    ++E                H
Sbjct: 122 TNPVD---ILTYATWKFSGLPKERVIGSGTTLDSARFRFMLSEYFGAAPQNVHAHIIGEH 178
Query: 219 AGVTILPLLSQ-----------VKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSATL 267
            G T LP+ S            V+   ++ QEE + + + ++N    ++E K GA    +
Sbjct: 179 -GDTELPVWSHANVGGVPVSELVEKNDAYKQEELDQIVDDVKNAAYHIIE-KKGATYYGV 236
Query: 268 SMAYAAV 274
           +M+ A +
Sbjct: 237 AMSLARI 243

>pdb|3PQE|A Chain A, Crystal Structure Of L-Lactate Dehydrogenase From Bacillus Subtilis With H171c Mutation Length = 326

Iteration: 1
 Score = 42.4 bits (98), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 58/247 (23%), Positives = 101/247 (40%), Gaps = 26/247 (10%)
Query: 44  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQ 103
           KVA++GA G +G   A  +    +   L + DV N      D+  ++ G   + F  QP 
Sbjct: 7   KVALIGA-GFVGSSYAFALINQGITDELVVIDV-NKEKAMGDVMDLNHG---KAFAPQPV 61
Query: 104 LENALT-----GMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLI 158
             +  T       D+V I AG  +KPG TR +L   N  I + +   +     +    + 
Sbjct: 62  KTSYGTYEDCKDADIVCICAGANQKPGETRLELVEKNLKIFKGIVSEVMASGFDGIFLVA 121
Query: 159 SNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEXXXXXXXXXXXXXXXXH 218
           +NPV+    +    +K +G    + +   T LD  R    ++E                H
Sbjct: 122 TNPVD---ILTYATWKFSGLPKERVIGSGTTLDSARFRFMLSEYFGAAPQNVCAHIIGEH 178
Query: 219 AGVTILPLLSQ-----------VKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSATL 267
            G T LP+ S            V+   ++ QEE + + + ++N    ++E K GA    +
Sbjct: 179 -GDTELPVWSHANVGGVPVSELVEKNDAYKQEELDQIVDDVKNAAYHIIE-KKGATYYGV 236
Query: 268 SMAYAAV 274
           +M+ A +
Sbjct: 237 AMSLARI 243

>pdb|1CIV|A Chain A, Chloroplast Nadp-Dependent Malate Dehydrogenase From Flaveria Bidentis Length = 385

Iteration: 1
 Score = 41.6 bits (96), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 29/81 (35%), Positives = 37/81 (45%), Gaps = 4/81 (4%)
Query: 121 PRKPGMTRDDLFNINAGIVRTLCEGI-AKCCPNATVNLISNPVNSTVPIAAEVFKKAGTY 179
           PR PGM R DL +IN  I     + + A   PN  V ++ NP N+   I     K A   
Sbjct: 129 PRGPGMERADLLDINGQIFAEQGKALNAVASPNVKVMVVGNPCNTNALIC---LKNAPNI 185
Query: 180 DPKKLLGVTMLDVVRANTFVA 200
            PK    +T LD  RA   +A
Sbjct: 186 PPKNFHALTRLDENRAKCQLA 206

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	354
1smk_A	326	Malate dehydrogenase, glyoxysomal; tricarboxylic c	0.0
1mld_A	314	Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D	1e-176
3hhp_A	312	Malate dehydrogenase; MDH, citric acid cycle, TCA	1e-170
3fi9_A	343	Malate dehydrogenase; structural genomics, oxidore	2e-50
1o6z_A	303	MDH, malate dehydrogenase; halophilic, ION-binding	2e-43
1hye_A	313	L-lactate/malate dehydrogenase; nucleotide binding	3e-41
3nep_X	314	Malate dehydrogenase; halophIle, molecular adpatat	9e-41
3tl2_A	315	Malate dehydrogenase; center for structural genomi	1e-40
1guz_A	310	Malate dehydrogenase; oxidoreductase, tricarboxyli	2e-40
2d4a_B	308	Malate dehydrogenase; archaea, hyperthermophIle, o	3e-40
1ur5_A	309	Malate dehydrogenase; oxidoreductase, tricarboxyli	4e-40
2hjr_A	328	Malate dehydrogenase; malaria, structural genomics	1e-39
2ewd_A	317	Lactate dehydrogenase,; protein-substrate_cofactor	2e-39
3gvi_A	324	Malate dehydrogenase; NAD, oxidoreductase, tricarb	2e-38
1pzg_A	331	LDH, lactate dehydrogenase; apicomplexa, APAD, tet	3e-38
1ldn_A	316	L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NA	4e-38
3p7m_A	321	Malate dehydrogenase; putative dehydrogenase, enzy	4e-38
3pqe_A	326	L-LDH, L-lactate dehydrogenase; FBP, oxidoreductas	1e-37
1ez4_A	318	Lactate dehydrogenase; rossmann fold, oxidoreducta	2e-37
2zqz_A	326	L-LDH, L-lactate dehydrogenase; oxidoreductase, ro	4e-37
4aj2_A	331	L-lactate dehydrogenase A chain; oxidoreductase-in	4e-37
1lld_A	319	L-lactate dehydrogenase; oxidoreductase(CHOH (D)-N	8e-37
1t2d_A	322	LDH-P, L-lactate dehydrogenase; ternary complex, o	9e-37
1a5z_A	319	L-lactate dehydrogenase; oxidoreductase, glycolysi	1e-36
3d0o_A	317	L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, gly	1e-36
2xxj_A	310	L-LDH, L-lactate dehydrogenase; oxidoreductase, hy	1e-36
5mdh_A	333	Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH	8e-36
1y6j_A	318	L-lactate dehydrogenase; southeast collaboratory f	9e-36
7mdh_A	375	Protein (malate dehydrogenase); chloroplastic mala	1e-34
1y7t_A	327	Malate dehydrogenase; NAD-dependent-MDH-NADPH comp	5e-34
2i6t_A	303	Ubiquitin-conjugating enzyme E2-like isoform A; L-	1e-33
2v6b_A	304	L-LDH, L-lactate dehydrogenase; oxidoreductase, ra	2e-33
1b8p_A	329	Protein (malate dehydrogenase); oxidoreductase; 1.	2e-33
1oju_A	294	MDH, malate dehydrogenase; hyperthermophilic, oxid	1e-32
1hyh_A	309	L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2	2e-31
3ldh_A	330	Lactate dehydrogenase; oxidoreductase, CHOH donor,	4e-31
1obb_A	480	Maltase, alpha-glucosidase; glycosidase, sulfinic	4e-08
3fef_A	450	Putative glucosidase LPLD; gulosidase, structural	2e-07
1u8x_X	472	Maltose-6'-phosphate glucosidase; structural genom	3e-07
1s6y_A	450	6-phospho-beta-glucosidase; hydrolase, structural	1e-05
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	4e-04
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	8e-04

>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A Length = 326

 Score =  507 bits (1309), Expect = 0.0
 Identities = 292/320 (91%), Positives = 305/320 (95%)

Query: 35  RAKGGAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAV 94
           RAKGGA GFKVAILGAAGGIGQPLAMLMK+NPLVSVLHLYDVVN PGVTADISHMDTGAV
Sbjct: 1   RAKGGAPGFKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNAPGVTADISHMDTGAV 60

Query: 95  VRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNAT 154
           VRGFLGQ QLE ALTGMDL+I+PAGVPRKPGMTRDDLF INAGIV+TLCEGIAKCCP A 
Sbjct: 61  VRGFLGQQQLEAALTGMDLIIVPAGVPRKPGMTRDDLFKINAGIVKTLCEGIAKCCPRAI 120

Query: 155 VNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPV 214
           VNLISNPVNSTVPIAAEVFKKAGTYDPK+LLGVTMLDVVRANTFVAEVLGLDPRDVDVPV
Sbjct: 121 VNLISNPVNSTVPIAAEVFKKAGTYDPKRLLGVTMLDVVRANTFVAEVLGLDPRDVDVPV 180

Query: 215 VGGHAGVTILPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAV 274
           VGGHAGVTILPLLSQVKPP SFTQEE  YLT+RIQNGGTEVVEAKAGAGSATLSMAYAAV
Sbjct: 181 VGGHAGVTILPLLSQVKPPSSFTQEEISYLTDRIQNGGTEVVEAKAGAGSATLSMAYAAV 240

Query: 275 KFADACLRGLRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQLGPLNEYERIGL 334
           KFADACLRGLRGDAGV+ECAFV+SQVTELPFFASKVRLGR G EE++ LGPLNEYERIGL
Sbjct: 241 KFADACLRGLRGDAGVIECAFVSSQVTELPFFASKVRLGRNGIEEVYSLGPLNEYERIGL 300

Query: 335 EKAKKELAGSIQKGISFSKK 354
           EKAKKELAGSI+KG+SF + 
Sbjct: 301 EKAKKELAGSIEKGVSFIRS 320

>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A* Length = 314

 Score =  489 bits (1262), Expect = e-176
 Identities = 180/310 (58%), Positives = 231/310 (74%)

Query: 44  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQ 103
           KVA+LGA+GGIGQPL++L+K +PLVS L LYD+ +TPGV AD+SH++T A V+G+LG  Q
Sbjct: 2   KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVAADLSHIETRATVKGYLGPEQ 61

Query: 104 LENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVN 163
           L + L G D+V+IPAGVPRKPGMTRDDLFN NA IV TL    A+ CP+A + +ISNPVN
Sbjct: 62  LPDCLKGCDVVVIPAGVPRKPGMTRDDLFNTNATIVATLTAACAQHCPDAMICIISNPVN 121

Query: 164 STVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTI 223
           ST+PI AEVFKK G Y+P K+ GVT LD+VRAN FVAE+ GLDP  V VPV+GGHAG TI
Sbjct: 122 STIPITAEVFKKHGVYNPNKIFGVTTLDIVRANAFVAELKGLDPARVSVPVIGGHAGKTI 181

Query: 224 LPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRG 283
           +PL+SQ  P   F Q++   LT RIQ  GTEVV+AKAGAGSATLSMAYA  +F  + +  
Sbjct: 182 IPLISQCTPKVDFPQDQLSTLTGRIQEAGTEVVKAKAGAGSATLSMAYAGARFVFSLVDA 241

Query: 284 LRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAG 343
           + G  GVVEC+FV SQ T+ P+F++ + LG++G E+   +G ++ +E   + +A  EL  
Sbjct: 242 MNGKEGVVECSFVKSQETDCPYFSTPLLLGKKGIEKNLGIGKISPFEEKMIAEAIPELKA 301

Query: 344 SIQKGISFSK 353
           SI+KG  F K
Sbjct: 302 SIKKGEEFVK 311

>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A* Length = 312

 Score =  475 bits (1226), Expect = e-170
 Identities = 173/313 (55%), Positives = 214/313 (68%), Gaps = 4/313 (1%)

Query: 44  KVAILGAAGGIGQPLAMLMKIN-PLVSVLHLYDVVN-TPGVTADISHMDTGAVVRGFLGQ 101
           KVA+LGAAGGIGQ LA+L+K   P  S L LYD+   TPGV  D+SH+ T   ++GF G 
Sbjct: 2   KVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPVTPGVAVDLSHIPTAVKIKGFSG- 60

Query: 102 PQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNP 161
                AL G D+V+I AGV RKPGM R DLFN+NAGIV+ L + +AK CP A + +I+NP
Sbjct: 61  EDATPALEGADVVLISAGVARKPGMDRSDLFNVNAGIVKNLVQQVAKTCPKACIGIITNP 120

Query: 162 VNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGV 221
           VN+TV IAAEV KKAG YD  KL GVT LD++R+NTFVAE+ G  P +V+VPV+GGH+GV
Sbjct: 121 VNTTVAIAAEVLKKAGVYDKNKLFGVTTLDIIRSNTFVAELKGKQPGEVEVPVIGGHSGV 180

Query: 222 TILPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACL 281
           TILPLLSQV P  SFT++E   LT RIQN GTEVVEAKAG GSATLSM  AA +F  + +
Sbjct: 181 TILPLLSQV-PGVSFTEQEVADLTKRIQNAGTEVVEAKAGGGSATLSMGQAAARFGLSLV 239

Query: 282 RGLRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKEL 341
           R L+G+ GVVECA+V        FF+  + LG+ G EE   +G L+ +E+  LE     L
Sbjct: 240 RALQGEQGVVECAYVEGDGQYARFFSQPLLLGKNGVEERKSIGTLSAFEQNALEGMLDTL 299

Query: 342 AGSIQKGISFSKK 354
              I  G  F  K
Sbjct: 300 KKDIALGEEFVNK 312

>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis} Length = 343

 Score =  170 bits (434), Expect = 2e-50
 Identities = 78/317 (24%), Positives = 124/317 (39%), Gaps = 25/317 (7%)

Query: 44  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVV-NTP-GVTADISHMDTGAVVRGFLGQ 101
           K+ I+GAAG IG  +A    +  L   L LYD       GV  +I     G         
Sbjct: 10  KLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFAVGLEGVAEEI--RHCGFEGLNLTFT 67

Query: 102 PQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNAT-VNLISN 160
             ++ ALT    ++   G PRK GMTR+DL   NA I   L + I   CP+   V +I N
Sbjct: 68  SDIKEALTDAKYIVSSGGAPRKEGMTREDLLKGNAEIAAQLGKDIKSYCPDCKHVIIIFN 127

Query: 161 PVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVD-VPVVGGHA 219
           P + T  +       +G   P ++  +  LD  R  + +A+  G+    V      GGH 
Sbjct: 128 PADITGLVT---LIYSG-LKPSQVTTLAGLDSTRLQSELAKHFGIKQSLVTNTRTYGGH- 182

Query: 220 GVTILPL----------LSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSM 269
           G  +             L+ +      T E+   L  R+  GG  +++ +    S+  S 
Sbjct: 183 GEQMAVFASTAKVNGTPLTDLIGTDKLTNEQWAELKQRVVKGGANIIKLR--GRSSFQSP 240

Query: 270 AYAAVKFADACLRGLRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQLGPLNEY 329
           +Y +++   A + G           +V     E    A +  + + G +        NE 
Sbjct: 241 SYVSIEMIRAAMGGEAFR--WPAGCYVNVPGFEHIMMAMETTITKDGVKHSDINQLGNEA 298

Query: 330 ERIGLEKAKKELAGSIQ 346
           ER  L+++   LA    
Sbjct: 299 ERAALKESYSHLAKLRD 315

>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A Length = 303

 Score =  151 bits (383), Expect = 2e-43
 Identities = 77/327 (23%), Positives = 134/327 (40%), Gaps = 50/327 (15%)

Query: 44  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVT----ADISHMDTGAVVRGFL 99
           KV+++GAAG +G      + +  +   +   D+ +    T    AD +H         + 
Sbjct: 2   KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHG------IAYD 55

Query: 100 GQPQLE----NALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATV 155
              ++         G D+V+I AG+PR+PG TR DL   NA I+  +   + +   +   
Sbjct: 56  SNTRVRQGGYEDTAGSDVVVITAGIPRQPGQTRIDLAGDNAPIMEDIQSSLDEHNDDYIS 115

Query: 156 NLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRANTFVAEVLGLDPRDVDVPV 214
              SNPV+    +      +AG    ++++G    LD  R    ++E      ++V+  +
Sbjct: 116 LTTSNPVD----LLNRHLYEAGDRSREQVIGFGGRLDSARFRYVLSEEFDAPVQNVEGTI 171

Query: 215 VGGHAGVTILPLLSQV----KPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMA 270
           +G H G   +P+ S+V      P  F+ +E E L   +Q    +V+E K   G+     A
Sbjct: 172 LGEH-GDAQVPVFSKVSVDGTDP-EFSGDEKEQLLGDLQESAMDVIERK---GATEWGPA 226

Query: 271 YAAVKFADACLRG----------LRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEI 320
                  +A L            L G+ G  +             F   V LG  G EEI
Sbjct: 227 RGVAHMVEAILHDTGEVLPASVKLEGEFGHEDT-----------AFGVPVSLGSNGVEEI 275

Query: 321 FQLGPLNEYERIGLEKAKKELAGSIQK 347
            +   L++YE+  +  A ++L+    K
Sbjct: 276 VEW-DLDDYEQDLMADAAEKLSDQYDK 301

>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A* Length = 313

 Score =  145 bits (369), Expect = 3e-41
 Identities = 73/331 (22%), Positives = 138/331 (41%), Gaps = 50/331 (15%)

Query: 44  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN----TPGVTADISHMDTGAVVRGF- 98
           KV I+GA+G +G   A+L+   P +  L L    +      G+  DI             
Sbjct: 2   KVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYD---ALAGTRSD 58

Query: 99  ----LGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNAT 154
               +   +    +   D+VII +GVPRK GM+R DL   NA IV    + IA+ C    
Sbjct: 59  ANIYVESDENLRIIDESDVVIITSGVPRKEGMSRMDLAKTNAKIVGKYAKKIAEICDTK- 117

Query: 155 VNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRANTFVAEVLGLDPRDVDVP 213
           + +I+NPV+    +          ++  ++ G+ T LD +R    +A+  G+   +V   
Sbjct: 118 IFVITNPVD----VMTYKALVDSKFERNQVFGLGTHLDSLRFKVAIAKFFGVHIDEVRTR 173

Query: 214 VVGGHAGVTILPLLSQ-------VKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSAT 266
           ++G H G +++PLLS        ++    F +   + +   ++  G +++  K   G + 
Sbjct: 174 IIGEH-GDSMVPLLSATSIGGIPIQKFERFKELPIDEIIEDVKTKGEQIIRLK---GGSE 229

Query: 267 LSMAYAAVKFADACLRG----------LRGDAGVVECAFVASQVTELPFFASKVRLGRQG 316
              A A +      +            + G+   +    +      +P     V++GR G
Sbjct: 230 FGPAAAILNVVRCIVNNEKRLLTLSAYVDGEFDGIRDVCIG-----VP-----VKIGRDG 279

Query: 317 AEEIFQLGPLNEYERIGLEKAKKELAGSIQK 347
            EE+  +  L++ E I   K+ + +    ++
Sbjct: 280 IEEVVSI-ELDKDEIIAFRKSAEIIKKYCEE 309

>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber} Length = 314

 Score =  144 bits (366), Expect = 9e-41
 Identities = 79/325 (24%), Positives = 143/325 (44%), Gaps = 44/325 (13%)

Query: 44  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLGQ 101
           KV ++GA G +G  +A  +    +   + + D+ +    G   D+      + + GF  +
Sbjct: 2   KVTVIGA-GNVGATVAECVARQDVAKEVVMVDIKDGMPQGKALDMRE---SSPIHGFDTR 57

Query: 102 PQLEN---ALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLI 158
               N        D+ II AG+PR PGM+RDDL   N  IV  + E   +  P++T+ ++
Sbjct: 58  VTGTNDYGPTEDSDVCIITAGLPRSPGMSRDDLLAKNTEIVGGVTEQFVEGSPDSTIIVV 117

Query: 159 SNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRANTFVAEVLGLDPRDVDVPVVGG 217
           +NP++    +   V  +A  +   +++G+  +LD  R  +F+AE L +  RDV   ++GG
Sbjct: 118 ANPLD----VMTYVAYEASGFPTNRVMGMAGVLDTGRFRSFIAEELDVSVRDVQALLMGG 173

Query: 218 HAGVTILPLLSQV----KPPCSF-TQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYA 272
           H G T++PL         P          E +  R +  G E+V+      SA  +   A
Sbjct: 174 H-GDTMVPLPRYTTVGGIPVPQLIDDARIEEIVERTKGAGGEIVDLM--GTSAWYAPGAA 230

Query: 273 AVKFADACLRG----------LRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQ 322
           A +  +A L+             G+ G+ +            F    V+LG  G EE+ +
Sbjct: 231 AAEMTEAILKDNKRILPCAAYCDGEYGLDDL-----------FIGVPVKLGAGGVEEVIE 279

Query: 323 LGPLNEYERIGLEKAKKELAGSIQK 347
           +  L+  E+  L+ +   +  ++  
Sbjct: 280 V-DLDADEKAQLKTSAGHVHSNLDD 303

>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis} Length = 315

 Score =  144 bits (365), Expect = 1e-40
 Identities = 89/327 (27%), Positives = 150/327 (45%), Gaps = 46/327 (14%)

Query: 44  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTA----DISHMDTGAVVRGFL 99
           KV+++GA G  G   A L+    L  V+ L D+      T     D+      + V+GF 
Sbjct: 10  KVSVIGA-GFTGATTAFLLAQKELADVV-LVDIPQLENPTKGKALDMLE---ASPVQGFD 64

Query: 100 GQPQLEN---ALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVN 156
                 +        D+V+I AG+ RKPGM+RDDL   N+ I++++   IAK  PNA + 
Sbjct: 65  ANIIGTSDYADTADSDVVVITAGIARKPGMSRDDLVATNSKIMKSITRDIAKHSPNAIIV 124

Query: 157 LISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRANTFVAEVLGLDPRDVDVPVV 215
           +++NPV+           K   +  ++++G   +LD  R  TF+A+ L L  +D+   V+
Sbjct: 125 VLTNPVD----AMTYSVFKEAGFPKERVIGQSGVLDTARFRTFIAQELNLSVKDITGFVL 180

Query: 216 GGHAGVTILPLLSQV----KPPCSF-TQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMA 270
           GGH G  ++PL+        P  +   +E  E +  R + GG E+V    G GSA  + A
Sbjct: 181 GGH-GDDMVPLVRYSYAGGIPLETLIPKERLEAIVERTRKGGGEIVG-LLGNGSAYYAPA 238

Query: 271 YAAVKFADACLRG----------LRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEI 320
            + V+  +A L+           L G+ G  +            +    V LG  G E+I
Sbjct: 239 ASLVEMTEAILKDQRRVLPAIAYLEGEYGYSDL-----------YLGVPVILGGNGIEKI 287

Query: 321 FQLGPLNEYERIGLEKAKKELAGSIQK 347
            +L  L   E+  L+++ + +   ++ 
Sbjct: 288 IEL-ELLADEKEALDRSVESVRNVMKV 313

>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A* Length = 310

 Score =  143 bits (364), Expect = 2e-40
 Identities = 91/325 (28%), Positives = 151/325 (46%), Gaps = 43/325 (13%)

Query: 44  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLGQ 101
           K+ ++GA G +G   A  +    L   L L DVV     G   D+        V  F  +
Sbjct: 2   KITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYE---SGPVGLFDTK 57

Query: 102 PQLEN---ALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLI 158
               N        D+VII AG+PRKPGMTR+DL   NAGIV+ + + I K   N  + ++
Sbjct: 58  VTGSNDYADTANSDIVIITAGLPRKPGMTREDLLMKNAGIVKEVTDNIMKHSKNPIIIVV 117

Query: 159 SNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRANTFVAEVLGLDPRDVDVPVVGG 217
           SNP++    I   V         ++++G+  +LD  R  +F+A  LG+  +D++  V+GG
Sbjct: 118 SNPLD----IMTHVAWVRSGLPKERVIGMAGVLDAARFRSFIAMELGVSMQDINACVLGG 173

Query: 218 HAGVTILPLLSQV----KPPCSF-TQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYA 272
           H G  ++P++        P       E  + L  R +NGG E+VE     GSA  + A +
Sbjct: 174 H-GDAMVPVVKYTTVAGIPISDLLPAETIDKLVERTRNGGAEIVEH-LKQGSAFYAPASS 231

Query: 273 AVKFADACLRG----------LRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQ 322
            V+  ++ +            L G  G+ +          +P     V+LGR G E+I++
Sbjct: 232 VVEMVESIVLDRKRVLPCAVGLEGQYGIDKTFV------GVP-----VKLGRNGVEQIYE 280

Query: 323 LGPLNEYERIGLEKAKKELAGSIQK 347
           +  L++ +   L+K+ K +  + + 
Sbjct: 281 I-NLDQADLDLLQKSAKIVDENCKM 304

>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix} Length = 308

 Score =  143 bits (362), Expect = 3e-40
 Identities = 74/327 (22%), Positives = 134/327 (40%), Gaps = 51/327 (15%)

Query: 45  VAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLGQP 102
           + ILGA G +G   A+++ +     +L L         G   D++H    A   G   + 
Sbjct: 2   ITILGA-GKVGMATAVMLMMRGYDDLL-LIARTPGKPQGEALDLAH---AAAELGVDIRI 56

Query: 103 QLEN---ALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS 159
              N    + G D+V++ AG+ RKPGMTR+ L   NA  +  L E I     +A V + +
Sbjct: 57  SGSNSYEDMRGSDIVLVTAGIGRKPGMTREQLLEANANTMADLAEKIKAYAKDAIVVITT 116

Query: 160 NPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRANTFVAEVLGLDPRDVDVPVVGGH 218
           NPV+        V  K   +  ++++G   +LD  R   ++++ LG+  + V+  V+G H
Sbjct: 117 NPVD----AMTYVMYKKTGFPRERVIGFSGILDSARMAYYISQKLGVSFKSVNAIVLGMH 172

Query: 219 AGVTILPLLSQV----KPPCSF-TQEETEYLTNRIQNGGTEVVEAKAGA-----GSATLS 268
            G  + P+         P     ++EE E + +   N G ++ E +  +      +  + 
Sbjct: 173 -GQKMFPVPRLSSVGGVPLEHLMSKEEIEEVVSETVNAGAKITELRGYSSNYGPAAGLVL 231

Query: 269 MAYAAVKFAD--------ACLRGLRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEI 320
              A  +  D          L+G  G   +                     +G+ G E I
Sbjct: 232 TVEAIKR--DSKRIYPYSLYLQGEYGYNDI--------------VAEVPAVIGKSGIERI 275

Query: 321 FQLGPLNEYERIGLEKAKKELAGSIQK 347
            +L PL E E+   ++A + +   ++ 
Sbjct: 276 IEL-PLTEDEKRKFDEAVQAVKKLVET 301

>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A* Length = 309

 Score =  142 bits (361), Expect = 4e-40
 Identities = 85/325 (26%), Positives = 142/325 (43%), Gaps = 44/325 (13%)

Query: 44  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLGQ 101
           K++I+GA G +G   A  +    L  ++ L D+V     G   D+      + + GF  +
Sbjct: 4   KISIIGA-GFVGSTTAHWLAAKELGDIV-LLDIVEGVPQGKALDLYE---ASPIEGFDVR 58

Query: 102 PQLEN---ALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLI 158
               N        D++++ +G PRKPGM+R+DL  +NA I R      A   PNA + ++
Sbjct: 59  VTGTNNYADTANSDVIVVTSGAPRKPGMSREDLIKVNADITRACISQAAPLSPNAVIIMV 118

Query: 159 SNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRANTFVAEVLGLDPRDVDVPVVGG 217
           +NP++        +  +   +  ++++G   +LD  R  TF+A   G+   DV   ++GG
Sbjct: 119 NNPLD----AMTYLAAEVSGFPKERVIGQAGVLDAARYRTFIAMEAGVSVEDVQAMLMGG 174

Query: 218 HAGVTILPLLSQV----KPPCSF-TQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYA 272
           H G  ++PL         P   F   +    +  R + GG E+V      GSA  + A A
Sbjct: 175 H-GDEMVPLPRFSCISGIPVSEFIAPDRLAQIVERTRKGGGEIVNLL-KTGSAYYAPAAA 232

Query: 273 AVKFADACLRG----------LRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQ 322
             +  +A L+           L G  G+ +            +F   V LG  G E+I +
Sbjct: 233 TAQMVEAVLKDKKRVMPVAAYLTGQYGLNDI-----------YFGVPVILGAGGVEKILE 281

Query: 323 LGPLNEYERIGLEKAKKELAGSIQK 347
           L PLNE E   L  + K +  ++  
Sbjct: 282 L-PLNEEEMALLNASAKAVRATLDT 305

>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum} Length = 328

 Score =  141 bits (359), Expect = 1e-39
 Identities = 98/330 (29%), Positives = 148/330 (44%), Gaps = 49/330 (14%)

Query: 44  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLGQ 101
           K++I+GA G IG  +A+L+    L  V  ++D++     G   D++H      + G   +
Sbjct: 16  KISIIGA-GQIGSTIALLLGQKDLGDVY-MFDIIEGVPQGKALDLNH---CMALIGSPAK 70

Query: 102 PQLEN---ALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLI 158
              EN    L   D+VII AGVPRKP MTR DL  +NA IV ++ E + K CPNA V  I
Sbjct: 71  IFGENNYEYLQNSDVVIITAGVPRKPNMTRSDLLTVNAKIVGSVAENVGKYCPNAFVICI 130

Query: 159 SNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRANTFVAEVLGLDPRDVDVPVVGG 217
           +NP++         FK+       K+ G+  +LD  R    ++  LG+ P DV   VVGG
Sbjct: 131 TNPLD----AMVYYFKEKSGIPANKVCGMSGVLDSARFRCNLSRALGVKPSDVSAIVVGG 186

Query: 218 HAGVTILPL----------LSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSATL 267
           H G  ++PL          LS        T  +   +  +   GG E+VE     GSA  
Sbjct: 187 H-GDEMIPLTSSVTIGGILLSDFVEQGKITHSQINEIIKKTAFGGGEIVELL-KTGSAFY 244

Query: 268 SMAYAAVKFADACLRG----------LRGDAGVVECAFVASQVTELPFFASKVRLGRQGA 317
           + A +AV  A A L+           L G   V              F    V +G+ G 
Sbjct: 245 APAASAVAMAQAYLKDSKSVLVCSTYLTGQYNVNNL-----------FVGVPVVIGKNGI 293

Query: 318 EEIFQLGPLNEYERIGLEKAKKELAGSIQK 347
           E++  +  L++ E+    K+ + +   +Q 
Sbjct: 294 EDVVIV-NLSDDEKSLFSKSVESIQNLVQD 322

>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A Length = 317

 Score =  140 bits (356), Expect = 2e-39
 Identities = 89/330 (26%), Positives = 148/330 (44%), Gaps = 49/330 (14%)

Query: 44  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLGQ 101
           K+A++G+ G IG  +A ++  + L  V+ L+D+      G   DI+H     V+ G   +
Sbjct: 6   KIAVIGS-GQIGGNIAYIVGKDNLADVV-LFDIAEGIPQGKALDITH---SMVMFGSTSK 60

Query: 102 PQLEN---ALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLI 158
               +    ++G D+VII A +P +P   R +L   NA I+ ++ EG+ K CPNA V  I
Sbjct: 61  VIGTDDYADISGSDVVIITASIPGRPKDDRSELLFGNARILDSVAEGVKKYCPNAFVICI 120

Query: 159 SNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRANTFVAEVLGLDPRDVDVPVVGG 217
           +NP++    +    F+K       K+ G+  +LD  R  TF+A+  G++  DV   V+GG
Sbjct: 121 TNPLD----VMVSHFQKVSGLPHNKVCGMAGVLDSSRFRTFIAQHFGVNASDVSANVIGG 176

Query: 218 HAGVTILPL----------LSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSATL 267
           H G  ++P           LS        TQE+ + +    +    EV +     G+A  
Sbjct: 177 H-GDGMVPATSSVSVGGVPLSSFIKQGLITQEQIDEIVCHTRIAWKEVADNL-KTGTAYF 234

Query: 268 SMAYAAVKFADACLRG----------LRGDAGVVECAFVASQVTELPFFASKVRLGRQGA 317
           + A AAVK A+A L+                GV            +P       +G+ G 
Sbjct: 235 APAAAAVKMAEAYLKDKKAVVPCSAFCSNHYGVKGIYM------GVP-----TIIGKNGV 283

Query: 318 EEIFQLGPLNEYERIGLEKAKKELAGSIQK 347
           E+I +L  L   E+  L ++  E+    + 
Sbjct: 284 EDILEL-DLTPLEQKLLGESINEVNTISKV 312

>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A* Length = 324

 Score =  138 bits (351), Expect = 2e-38
 Identities = 94/330 (28%), Positives = 155/330 (46%), Gaps = 49/330 (14%)

Query: 44  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLGQ 101
           K+A++G+ G IG  LA L  +  L  V+ L+D+      G   DI+     + V GF  +
Sbjct: 9   KIALIGS-GMIGGTLAHLAGLKELGDVV-LFDIAEGTPQGKGLDIAE---SSPVDGFDAK 63

Query: 102 PQLEN---ALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLI 158
               N   A+ G D+VI+ AGVPRKPGM+RDDL  IN  ++  +  GI K  P A V  I
Sbjct: 64  FTGANDYAAIEGADVVIVTAGVPRKPGMSRDDLLGINLKVMEQVGAGIKKYAPEAFVICI 123

Query: 159 SNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRANTFVAEVLGLDPRDVDVPVVGG 217
           +NP++          +K       K++G+  +LD  R   F++E   +   DV V V+GG
Sbjct: 124 TNPLD----AMVWALQKFSGLPAHKVVGMAGVLDSARFRYFLSEEFNVSVEDVTVFVLGG 179

Query: 218 HAGVTILPL----------LSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSATL 267
           H G +++PL          L  +      +Q++ + +  R ++GG E+V      GSA  
Sbjct: 180 H-GDSMVPLARYSTVAGIPLPDLVKMGWTSQDKLDKIIQRTRDGGAEIVGLL-KTGSAFY 237

Query: 268 SMAYAAVKFADACLRG----------LRGDAGVVECAFVASQVTELPFFASKVRLGRQGA 317
           + A +A++ A++ L+           L G  GV +            +      +G  G 
Sbjct: 238 APAASAIQMAESYLKDKKRVLPVAAQLSGQYGVKDM-----------YVGVPTVIGANGV 286

Query: 318 EEIFQLGPLNEYERIGLEKAKKELAGSIQK 347
           E I ++  L++ E+   +K+   +AG  + 
Sbjct: 287 ERIIEI-DLDKDEKAQFDKSVASVAGLCEA 315

>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A* Length = 331

 Score =  138 bits (350), Expect = 3e-38
 Identities = 90/336 (26%), Positives = 146/336 (43%), Gaps = 55/336 (16%)

Query: 44  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGF--- 98
           KVA++G+ G IG  +  L  +  L  V+ LYDVV     G   D+SH      V      
Sbjct: 11  KVAMIGS-GMIGGTMGYLCALRELADVV-LYDVVKGMPEGKALDLSH---VTSVVDTNVS 65

Query: 99  -LGQPQLENALTGMDLVIIPAGVPRKPGM-----TRDDLFNINAGIVRTLCEGIAKCCPN 152
              +   E ALTG D VI+ AG+ + PG      +R+DL   N+ I+R + + I K CP 
Sbjct: 66  VRAEYSYEAALTGADCVIVTAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKYCPK 125

Query: 153 ATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRANTFVAEVLGLDPRDVD 211
             + +++NP++       +V  +A       + G+  MLD  R   +VA+ L + PRDV 
Sbjct: 126 TFIIVVTNPLD----CMVKVMCEASGVPTNMICGMACMLDSGRFRRYVADALSVSPRDVQ 181

Query: 212 VPVVGGHAGVTILPLLSQVK----------PPCSFTQEETEYLTNRIQNGGTEVVEAKAG 261
             V+G H G  ++PL+  +                T+++ E +    +  G E+V    G
Sbjct: 182 ATVIGTH-GDCMVPLVRYITVNGYPIQKFIKDGVVTEKQLEEIAEHTKVSGGEIVRFL-G 239

Query: 262 AGSATLSMAYAAVKFADACLRG----------LRGDAGVVECAFVASQVTELPFFASKVR 311
            GSA  + A +AV  A + L              G+ G+ +            F      
Sbjct: 240 QGSAYYAPAASAVAMATSFLNDEKRVIPCSVYCNGEYGLKDM-----------FIGLPAV 288

Query: 312 LGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSIQK 347
           +G  G E + +L  LNE E+   +K+  ++    + 
Sbjct: 289 IGGAGIERVIEL-ELNEEEKKQFQKSVDDVMALNKA 323

>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A* Length = 316

 Score =  137 bits (348), Expect = 4e-38
 Identities = 68/335 (20%), Positives = 125/335 (37%), Gaps = 54/335 (16%)

Query: 44  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLGQ 101
           +V ++GA G +G      +    +   + L D       G   D +H   G V   F  +
Sbjct: 8   RVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNH---GKV---FAPK 60

Query: 102 PQLENA-----LTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVN 156
           P              DLV+I AG  +KPG TR DL + N  I R++ E +          
Sbjct: 61  PVDIWHGDYDDCRDADLVVICAGANQKPGETRLDLVDKNIAIFRSIVESVMASGFQGLFL 120

Query: 157 LISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRANTFVAEVLGLDPRDVDVPVV 215
           + +NPV+    I      K      ++++G  T+LD  R    + E   + P++V   ++
Sbjct: 121 VATNPVD----ILTYATWKFSGLPHERVIGSGTILDTARFRFLLGEYFSVAPQNVHAYII 176

Query: 216 GGH--------AGVTI--LPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSA 265
           G H        +   I  +P+   V+      Q++ E +   +++   +++E K   G+ 
Sbjct: 177 GEHGDTELPVWSQAYIGVMPIRKLVESKGEEAQKDLERIFVNVRDAAYQIIEKK---GAT 233

Query: 266 TLSMAYAAVKFADACLRG----------LRGDAGVVECAFVASQVTELPFFASKVRLGRQ 315
              +A    +   A L            L G  G  +          +P       + R 
Sbjct: 234 YYGIAMGLARVTRAILHNENAILTVSAYLDGLYGERDVYI------GVP-----AVINRN 282

Query: 316 GAEEIFQLGPLNEYERIGLEKAKKELAGSIQKGIS 350
           G  E+ ++  LN+ E+     +   L   + +  +
Sbjct: 283 GIREVIEI-ELNDDEKNRFHHSAATLKSVLARAFT 316

>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis} Length = 321

 Score =  137 bits (348), Expect = 4e-38
 Identities = 96/331 (29%), Positives = 155/331 (46%), Gaps = 50/331 (15%)

Query: 44  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLGQ 101
           K+ ++GA G IG  LA L  I  L  V+ L+D+      G   D+        + G   +
Sbjct: 7   KITLVGA-GNIGGTLAHLALIKQLGDVV-LFDIAQGMPNGKALDLLQ---TCPIEGVDFK 61

Query: 102 PQLEN---ALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLI 158
            +  N    L   D+VI+ AGVPRKPGM+RDDL  IN  +++T+ EGI   CPNA V  I
Sbjct: 62  VRGTNDYKDLENSDVVIVTAGVPRKPGMSRDDLLGINIKVMQTVGEGIKHNCPNAFVICI 121

Query: 159 SNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRANTFVAEVLGLDPRDVDVPVVGG 217
           +NP++    I   + +K       K++G+  +LD  R  TF+A+ L +  + V   V+GG
Sbjct: 122 TNPLD----IMVNMLQKFSGVPDNKIVGMAGVLDSARFRTFLADELNVSVQQVQAYVMGG 177

Query: 218 HAGVTILPL----------LSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSATL 267
           H G T++PL          L Q+       QE  + + +R ++GG E+V      GSA  
Sbjct: 178 H-GDTMVPLTKMSNVAGVSLEQLVKEGKLKQERLDAIVSRTRSGGGEIVALL-KTGSAYY 235

Query: 268 SMAYAAVKFADACLRGLR-----------GDAGVVECAFVASQVTELPFFASKVRLGRQG 316
           + A A ++ A++ L+  +           G  G+ E  FV      +P       +   G
Sbjct: 236 APAAAGIQMAESFLKDKKMILPCAAKVKAGMYGLDEDLFVG-----VP-----TEISANG 285

Query: 317 AEEIFQLGPLNEYERIGLEKAKKELAGSIQK 347
              I ++  +++ ER  L+ +   +    + 
Sbjct: 286 VRPI-EV-EISDKEREQLQVSINAIKDLNKA 314

>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A* Length = 326

 Score =  136 bits (346), Expect = 1e-37
 Identities = 73/339 (21%), Positives = 129/339 (38%), Gaps = 54/339 (15%)

Query: 44  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLGQ 101
           KVA++GA G +G   A  +    +   L + DV      G   D++H   G     F  Q
Sbjct: 7   KVALIGA-GFVGSSYAFALINQGITDELVVIDVNKEKAMGDVMDLNH---GKA---FAPQ 59

Query: 102 PQLENA-----LTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVN 156
           P   +          D+V I AG  +KPG TR +L   N  I + +   +     +    
Sbjct: 60  PVKTSYGTYEDCKDADIVCICAGANQKPGETRLELVEKNLKIFKGIVSEVMASGFDGIFL 119

Query: 157 LISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRANTFVAEVLGLDPRDVDVPVV 215
           + +NPV+    I      K      ++++G  T LD  R    ++E  G  P++V   ++
Sbjct: 120 VATNPVD----ILTYATWKFSGLPKERVIGSGTTLDSARFRFMLSEYFGAAPQNVCAHII 175

Query: 216 GGH--------AGVTI--LPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSA 265
           G H        +   +  +P+   V+   ++ QEE + + + ++N    ++E K   G+ 
Sbjct: 176 GEHGDTELPVWSHANVGGVPVSELVEKNDAYKQEELDQIVDDVKNAAYHIIEKK---GAT 232

Query: 266 TLSMAYAAVKFADACLRG----------LRGDAGVVECAFVASQVTELPFFASKVRLGRQ 315
              +A +  +   A L            L G  G  +          +P       + R 
Sbjct: 233 YYGVAMSLARITKAILHNENSILTVSTYLDGQYGADDVYI------GVP-----AVVNRG 281

Query: 316 GAEEIFQLGPLNEYERIGLEKAKKELAGSIQKGISFSKK 354
           G   I +L  LNE E+     +   L   ++   +  K 
Sbjct: 282 GIAGITEL-NLNEKEKEQFLHSAGVLKNILKPHFAEQKV 319

>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1 Length = 318

 Score =  135 bits (342), Expect = 2e-37
 Identities = 68/334 (20%), Positives = 128/334 (38%), Gaps = 54/334 (16%)

Query: 44  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLGQ 101
           KV ++G  G +G   A  M    +     + DVV   T G   D+           F   
Sbjct: 7   KVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLED---AQA---FTAP 59

Query: 102 PQLE----NALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNL 157
            ++     +     DLV+I AG P+KPG +R DL N N  I+ ++ + +     +    +
Sbjct: 60  KKIYSGEYSDCKDADLVVITAGAPQKPGESRLDLVNKNLNILSSIVKPVVDSGFDGIFLV 119

Query: 158 ISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRANTFVAEVLGLDPRDVDVPVVG 216
            +NPV+    I      K   +  ++++G  T LD  R    + +   +DPR VD  ++G
Sbjct: 120 AANPVD----ILTYATWKFSGFPKERVIGSGTSLDSSRLRVALGKQFNVDPRSVDAYIMG 175

Query: 217 GHAGVTILPLLSQVK----------PPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSAT 266
            H G +     S                  + ++   L + ++N   +++  K   G+  
Sbjct: 176 EH-GDSEFAAYSTATIGTRPVRDVAKEQGVSDDDLAKLEDGVRNKAYDIINLK---GATF 231

Query: 267 LSMAYAAVKFADACLRG----------LRGDAGVVECAFVASQVTELPFFASKVRLGRQG 316
             +  A ++ + A LR           + G  G+ +           P       +G  G
Sbjct: 232 YGIGTALMRISKAILRDENAVLPVGAYMDGQYGLNDIYI------GTP-----AIIGGTG 280

Query: 317 AEEIFQLGPLNEYERIGLEKAKKELAGSIQKGIS 350
            ++I +  PL+  E   ++ +   L   +  G++
Sbjct: 281 LKQIIES-PLSADELKKMQDSAATLKKVLNDGLA 313

>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A* Length = 326

 Score =  135 bits (342), Expect = 4e-37
 Identities = 70/334 (20%), Positives = 135/334 (40%), Gaps = 53/334 (15%)

Query: 44  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLGQ 101
           KV ++G  G +G   A  M +  +   + + D+    T G   D+S+         F   
Sbjct: 11  KVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLSN---ALP---FTSP 63

Query: 102 PQLE----NALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNL 157
            ++     +     DLV+I AG P+KPG TR DL N N  I++++ + I     N    +
Sbjct: 64  KKIYSAEYSDAKDADLVVITAGAPQKPGETRLDLVNKNLKILKSIVDPIVDSGFNGIFLV 123

Query: 158 ISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRANTFVAEVLGLDPRDVDVPVVG 216
            +NPV+    I      K   +   +++G  T LD  R    +AE++ +D R V   ++G
Sbjct: 124 AANPVD----ILTYATWKLSGFPKNRVVGSGTSLDTARFRQSIAEMVNVDARSVHAYIMG 179

Query: 217 GH--------AGVTI--LPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSAT 266
            H        +   I  + +   VK      +++   +   +++   E+++ K   G+  
Sbjct: 180 EHGDTEFPVWSHANIGGVTIAEWVKAHPEIKEDKLVKMFEDVRDAAYEIIKLK---GATF 236

Query: 267 LSMAYAAVKFADACLRG----------LRGDAGVVECAFVASQVTELPFFASKVRLGRQG 316
             +A A  + + A L            + G  G+ +           P       + R G
Sbjct: 237 YGIATALARISKAILNDENAVLPLSVYMDGQYGLNDIYI------GTP-----AVINRNG 285

Query: 317 AEEIFQLGPLNEYERIGLEKAKKELAGSIQKGIS 350
            + I ++ PL ++E   ++K+  +L   +    +
Sbjct: 286 IQNILEI-PLTDHEEESMQKSASQLKKVLTDAFA 318

>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ... Length = 331

 Score =  135 bits (342), Expect = 4e-37
 Identities = 76/338 (22%), Positives = 144/338 (42%), Gaps = 57/338 (16%)

Query: 44  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLGQ 101
           K+ ++G  G +G   A+ + +  L   L L DV+     G   D+ H   G++   FL  
Sbjct: 21  KITVVGV-GAVGMACAISILMKDLADELALVDVIEDKLKGEMMDLQH---GSL---FLKT 73

Query: 102 PQLENA-----LTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVN 156
           P++ ++          LVII AG  ++ G +R +L   N  I + +   + K  P   + 
Sbjct: 74  PKIVSSKDYSVTANSKLVIITAGARQQEGESRLNLVQRNVNIFKFIIPNVVKYSPQCKLL 133

Query: 157 LISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRANTFVAEVLGLDPRDVDVPVV 215
           ++SNPV+    I   V  K   +   +++G    LD  R    + E LG+ P      V+
Sbjct: 134 IVSNPVD----ILTYVAWKISGFPKNRVIGSGCNLDSARFRYLMGERLGVHPLSCHGWVL 189

Query: 216 GGHAGVTILPLLSQV------------KPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAG 263
           G H G + +P+ S V            +      +E+ + +  ++ +   EV++ K   G
Sbjct: 190 GEH-GDSSVPVWSGVNVAGVSLKSLNPQLGTDADKEQWKDVHKQVVDSAYEVIKLK---G 245

Query: 264 SATLSMAYAAVKFADACLRG----------LRGDAGVVECAFVASQVTELPFFASKVRLG 313
             + ++  +    A++ ++           ++G  G+ E  F++     +P       LG
Sbjct: 246 YTSWAIGLSVADLAESIMKNLRRVHPISTMIKGLYGIKEDVFLS-----VP-----CILG 295

Query: 314 RQGAEEIFQLGPLNEYERIGLEKAKKELAGSIQKGISF 351
           + G  ++ ++  L   E   L+K+   L G IQK + F
Sbjct: 296 QNGISDVVKV-TLTPDEEARLKKSADTLWG-IQKELQF 331

>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T* Length = 319

 Score =  134 bits (339), Expect = 8e-37
 Identities = 69/339 (20%), Positives = 126/339 (37%), Gaps = 59/339 (17%)

Query: 44  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLGQ 101
           K+A++GA G +G  LA       +   + L D+          D+ H   G+    F   
Sbjct: 9   KLAVIGA-GAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQH---GSS---FYPT 61

Query: 102 PQLE-----NALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVN 156
             ++           D+V+I AG  +KPG +R +L      I++ +   + K  PNA   
Sbjct: 62  VSIDGSDDPEICRDADMVVITAGPRQKPGQSRLELVGATVNILKAIMPNLVKVAPNAIYM 121

Query: 157 LISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRANTFVAEVLGLDPRDVDVPVV 215
           LI+NPV+    IA  V +K       ++ G  T LD  R    +A+  G++ ++V   + 
Sbjct: 122 LITNPVD----IATHVAQKLTGLPENQIFGSGTNLDSARLRFLIAQQTGVNVKNVHAYIA 177

Query: 216 GGH-------------AGVTILPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGA 262
           G H              GV +               ++ E +   ++N   +++  K   
Sbjct: 178 GEHGDSEVPLWESATIGGVPMSDWTPLPGHDP-LDADKREEIHQEVKNAAYKIINGK--- 233

Query: 263 GSATLSMAYAAVKFADACLRG----------LRGDAGVVECAFVASQVTELPFFASKVRL 312
           G+   ++  + V   +A L            L+   G+ +          +P       L
Sbjct: 234 GATNYAIGMSGVDIIEAVLHDTNRILPVSSMLKDFHGISDICM------SVP-----TLL 282

Query: 313 GRQGAEEIFQLGPLNEYERIGLEKAKKELAGSIQKGISF 351
            RQG        P+++ E   L+++ + L         F
Sbjct: 283 NRQGVNNTINT-PVSDKELAALKRSAETLK-ETAAQFGF 319

>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A* Length = 322

 Score =  134 bits (339), Expect = 9e-37
 Identities = 84/335 (25%), Positives = 144/335 (42%), Gaps = 56/335 (16%)

Query: 44  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLGQ 101
           K+ ++G+ G IG  +A L+    L  V+ L+D+V     G   D SH     V+     +
Sbjct: 6   KIVLVGS-GMIGGVMATLIVQKNLGDVV-LFDIVKNMPHGKALDTSH---TNVMAYSNCK 60

Query: 102 PQLEN---ALTGMDLVIIPAGVPRKPGMT-----RDDLFNINAGIVRTLCEGIAKCCPNA 153
               N    L G D+VI+ AG  + PG +     RDDL  +N  I+  +   I K CPNA
Sbjct: 61  VSGSNTYDDLAGADVVIVTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKNCPNA 120

Query: 154 TVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRANTFVAEVLGLDPRDVDV 212
            + +++NPV+    +  ++  +       K++G+  +LD  R   ++++ L + PRDV+ 
Sbjct: 121 FIIVVTNPVD----VMVQLLHQHSGVPKNKIIGLGGVLDTSRLKYYISQKLNVCPRDVNA 176

Query: 213 PVVGGHAGVTILPL----------LSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGA 262
            +VG H G  ++ L          L +       +  E E + +R  N   E+V      
Sbjct: 177 HIVGAH-GNKMVLLKRYITVGGIPLQEFINNKLISDAELEAIFDRTVNTALEIVNLH--- 232

Query: 263 GSATLSMAYAAVKFADACLRG----------LRGDAGVVECAFVASQVTELPFFASKVRL 312
            S  ++ A A ++ A++ L+           L G  G  +            F  + V L
Sbjct: 233 ASPYVAPAAAIIEMAESYLKDLKKVLICSTLLEGQYGHSDI-----------FGGTPVVL 281

Query: 313 GRQGAEEIFQLGPLNEYERIGLEKAKKELAGSIQK 347
           G  G E++ +L  LN  E+   ++A  E       
Sbjct: 282 GANGVEQVIEL-QLNSEEKAKFDEAIAETKRMKAL 315

>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1 Length = 319

 Score =  133 bits (338), Expect = 1e-36
 Identities = 86/331 (25%), Positives = 138/331 (41%), Gaps = 53/331 (16%)

Query: 44  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLGQ 101
           K+ I+G  G +G   A  + +      + L DV      G   D+ H   G     F  +
Sbjct: 2   KIGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIH---GTP---FTRR 54

Query: 102 PQLE----NALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNL 157
             +       L G D+VI+ AGVP+KPG TR  L   NA +++ +   ++K  P++ V +
Sbjct: 55  ANIYAGDYADLKGSDVVIVAAGVPQKPGETRLQLLGRNARVMKEIARNVSKYAPDSIVIV 114

Query: 158 ISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRANTFVAEVLGLDPRDVDVPVVG 216
           ++NPV+    +    F K    DP+K+ G  T+LD  R  T +A+  G  PR V V V+G
Sbjct: 115 VTNPVD----VLTYFFLKESGMDPRKVFGSGTVLDTARLRTLIAQHCGFSPRSVHVYVIG 170

Query: 217 GH--------AGVTI--LPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSAT 266
            H        +G  I  +PL +  +       +  E    + +    E++E K   G+  
Sbjct: 171 EHGDSEVPVWSGAMIGGIPLQNMCQVCQKCDSKILENFAEKTKRAAYEIIERK---GATH 227

Query: 267 LSMAYAAVKFADACLRG----------LRGDAGVVECAFVASQVTELPFFASKVRLGRQG 316
            ++A A     ++              L    GV +          +P     V LG+ G
Sbjct: 228 YAIALAVADIVESIFFDEKRVLTLSVYLEDYLGVKDLCI------SVP-----VTLGKHG 276

Query: 317 AEEIFQLGPLNEYERIGLEKAKKELAGSIQK 347
            E I +L  LNE E     K+   L  +I +
Sbjct: 277 VERILEL-NLNEEELEAFRKSASILKNAINE 306

>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A* Length = 317

 Score =  133 bits (337), Expect = 1e-36
 Identities = 69/332 (20%), Positives = 126/332 (37%), Gaps = 55/332 (16%)

Query: 44  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLGQ 101
           KV ++G  G +G   A  +    +V  L + D+      G   D+ H         +   
Sbjct: 8   KVVLIGN-GAVGSSYAFSLVNQSIVDELVIIDLDTEKVRGDVMDLKHATP------YSPT 60

Query: 102 PQLENA-----LTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVN 156
                A         DLV+I AG  +KPG TR DL + N  I +++   +     +    
Sbjct: 61  TVRVKAGEYSDCHDADLVVICAGAAQKPGETRLDLVSKNLKIFKSIVGEVMASKFDGIFL 120

Query: 157 LISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRANTFVAEVLGLDPRDVDVPVV 215
           + +NPV+    I A    K      ++++G  T+LD  R    ++E   + PR VD  ++
Sbjct: 121 VATNPVD----ILAYATWKFSGLPKERVIGSGTILDSARFRLLLSEAFDVAPRSVDAQII 176

Query: 216 GGHAGVTILPLLSQVK----------PPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSA 265
           G H G T LP+ S                   + + E +  + ++   ++++AK   G+ 
Sbjct: 177 GEH-GDTELPVWSHANIAGQPLKTLLEQRPEGKAQIEQIFVQTRDAAYDIIQAK---GAT 232

Query: 266 TLSMAYAAVKFADACLRG----------LRGDAGVVECAFVASQVTELPFFASKVRLGRQ 315
              +A    +  +A  R           L G+    +          +P       + R 
Sbjct: 233 YYGVAMGLARITEAIFRNEDAVLTVSALLEGEYEEEDVYI------GVP-----AVINRN 281

Query: 316 GAEEIFQLGPLNEYERIGLEKAKKELAGSIQK 347
           G   + ++ PLN+ E+     + K L   + +
Sbjct: 282 GIRNVVEI-PLNDEEQSKFAHSAKTLKDIMAE 312

>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A Length = 310

 Score =  133 bits (337), Expect = 1e-36
 Identities = 69/337 (20%), Positives = 122/337 (36%), Gaps = 57/337 (16%)

Query: 44  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLGQ 101
           KV I+G+ G +G   A  + +  +   + L D+          DI H         F   
Sbjct: 2   KVGIVGS-GMVGSATAYALALLGVAREVVLVDLDRKLAQAHAEDILHATP------FAHP 54

Query: 102 PQLE----NALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNL 157
             +       L G   V++ AGV ++PG TR  L + NA +   +   + +  P A + +
Sbjct: 55  VWVWAGSYGDLEGARAVVLAAGVAQRPGETRLQLLDRNAQVFAQVVPRVLEAAPEAVLLV 114

Query: 158 ISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRANTFVAEVLGLDPRDVDVPVVG 216
            +NPV+    +  +V        P +++G  T+LD  R    +AE L + P+ V   V+G
Sbjct: 115 ATNPVD----VMTQVAYALSGLPPGRVVGSGTILDTARFRALLAEYLRVAPQSVHAYVLG 170

Query: 217 GHAGVTILPLLSQV------------KPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGS 264
            H G + + + S                  + + E+   +   ++     ++E K   G+
Sbjct: 171 EH-GDSEVLVWSSAQVGGVPLLEFAEARGRALSPEDRARIDEGVRRAAYRIIEGK---GA 226

Query: 265 ATLSMAYAAVKFADACLRG----------LRGDAGVVECAFVASQVTELPFFASKVRLGR 314
               +     +   A L                AGV+E +        LP       LG 
Sbjct: 227 TYYGIGAGLARLVRAILTDEKGVYTVSAFTPEVAGVLEVSL------SLP-----RILGA 275

Query: 315 QGAEEIFQLGPLNEYERIGLEKAKKELAGSIQKGISF 351
            G         L+  ER  L ++ + L       + F
Sbjct: 276 GGVAGTVYP-SLSPEERAALRRSAEILKE-AAFALGF 310

>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A* Length = 333

 Score =  131 bits (332), Expect = 8e-36
 Identities = 71/327 (21%), Positives = 123/327 (37%), Gaps = 41/327 (12%)

Query: 44  KVAILGAAGGIGQPLA-------MLMKINPLVSVLHLYDVVNTP----GVTADISHMDTG 92
           +V + GAAG I   L        +  K  P++  L L D+        GV  ++   D  
Sbjct: 5   RVLVTGAAGQIAYSLLYSIGNGSVFGKDQPII--LVLLDITPMMGVLDGVLMEL--QDCA 60

Query: 93  AV-VRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCP 151
              ++  +   + E A   +D+ I+   +PR+ GM R DL   N  I +     + K   
Sbjct: 61  LPLLKDVIATDKEEIAFKDLDVAILVGSMPRRDGMERKDLLKANVKIFKCQGAALDKYAK 120

Query: 152 NAT-VNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDV 210
            +  V ++ NP N+    A+   K A +   +    +T LD  RA   +A  LG+   DV
Sbjct: 121 KSVKVIVVGNPANTNCLTAS---KSAPSIPKENFSCLTRLDHNRAKAQIALKLGVTSDDV 177

Query: 211 DVPVVGGHAGVTILPLLSQ-----------VKPPCSFTQEETEYLTNRIQNGGTEVVEAK 259
              ++ G+   T  P ++            V                 +Q  G  V++A+
Sbjct: 178 KNVIIWGNHSSTQYPDVNHAKVKLQAKEVGVYEAVKDDSWLKGEFITTVQQRGAAVIKAR 237

Query: 260 AGAGSATLSMAYAAVKFADACLRGLRGDAGVVECAFVASQ-----VTELPFFASKVRLGR 314
               SA +S A A          G     G      + S      V +   ++  V +  
Sbjct: 238 -KLSSA-MSAAKAICDHVRDIWFG--TPEGEFVSMGIISDGNSYGVPDDLLYSFPVTIKD 293

Query: 315 QGAEEIFQLGPLNEYERIGLEKAKKEL 341
           +  + +  L P+N++ R  ++   KEL
Sbjct: 294 KTWKIVEGL-PINDFSREKMDLTAKEL 319

>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1 Length = 318

 Score =  131 bits (332), Expect = 9e-36
 Identities = 80/334 (23%), Positives = 141/334 (42%), Gaps = 58/334 (17%)

Query: 44  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLGQ 101
           KVAI+GA G +G   A  M +    + L L DV      G   DI+H   G     F+GQ
Sbjct: 9   KVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINH---GLP---FMGQ 61

Query: 102 PQLE----NALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNL 157
             L     + +   D++++ AG  RKPG TR DL   N  I + + + I K   +  + +
Sbjct: 62  MSLYAGDYSDVKDCDVIVVTAGANRKPGETRLDLAKKNVMIAKEVTQNIMKYYNHGVILV 121

Query: 158 ISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRANTFVAEVLGLDPRDVDVPVVG 216
           +SNPV+    I   + +K       K++G  T+LD +R    ++E LG+D ++V   ++G
Sbjct: 122 VSNPVD----IITYMIQKWSGLPVGKVIGSGTVLDSIRFRYLLSEKLGVDVKNVHGYIIG 177

Query: 217 GH-------------AGVTILPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAG 263
            H             AG  I   +   K    FT+E+ + +   ++  G  +++ K   G
Sbjct: 178 EHGDSQLPLWSCTHIAGKNINEYIDDPKCN--FTEEDKKKIAEDVKTAGATIIKNK---G 232

Query: 264 SATLSMAYAAVKFADACLRG----------LRGDAGVVECAFVASQVTELPFFASKVRLG 313
           +    +A +     +  L+           + G  G+ + A        LP       + 
Sbjct: 233 ATYYGIAVSINTIVETLLKNQNTIRTVGTVINGMYGIEDVAI------SLP-----SIVN 281

Query: 314 RQGAEEIFQLGPLNEYERIGLEKAKKELAGSIQK 347
            +G +E+ Q   L   E   L  + +++   + +
Sbjct: 282 SEGVQEVLQF-NLTPEEEEALRFSAEQVKKVLNE 314

>7mdh_A Protein (malate dehydrogenase); chloroplastic malate dehydrogenase (NADP+), activated by LIG chloroplastic malate dehydrogenase; 2.40A {Sorghum bicolor} SCOP: c.2.1.5 d.162.1.1 PDB: 1civ_A* Length = 375

 Score =  129 bits (326), Expect = 1e-34
 Identities = 67/323 (20%), Positives = 111/323 (34%), Gaps = 36/323 (11%)

Query: 44  KVAILGAAGGIGQPLA-------MLMKINPLVSVLHLYDVVNTP----GVTADISHMDTG 92
            +A+ GAAG I   L        +  +  P+   L L     +     GV  ++   D+ 
Sbjct: 34  NIAVSGAAGMISNHLLFKLASGEVFGQDQPIA--LKLLGSERSFQALEGVAMEL--EDSL 89

Query: 93  AV-VRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCP 151
              +R              +D  ++    PR PGM R  L +IN  I     + +     
Sbjct: 90  YPLLREVSIGIDPYEVFEDVDWALLIGAKPRGPGMERAALLDINGQIFADQGKALNAVAS 149

Query: 152 -NATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDV 210
            N  V ++ NP N+   I     K A     K    +T LD  RA   +A   G+    V
Sbjct: 150 KNVKVLVVGNPCNTNALICL---KNAPDIPAKNFHALTRLDENRAKCQLALKAGVFYDKV 206

Query: 211 DVPVVGGHAGVTILPLLSQ-------VKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAG 263
               + G+   T +P           VK     T+   E  T  +Q  G  +++   G  
Sbjct: 207 SNVTIWGNHSTTQVPDFLNAKIDGRPVKEVIKRTKWLEEEFTITVQKRGGALIQKW-GRS 265

Query: 264 SATLSMAYAAVKFADACLRGLRGDAGVVECAFVASQ-----VTELPFFASKVRLGRQGAE 318
           SA  S A +      + +       G      V +      + E   F+   R    G  
Sbjct: 266 SA-ASTAVSIADAIKSLVTP--TPEGDWFSTGVYTTGNPYGIAEDIVFSMPCRSKGDGDY 322

Query: 319 EIFQLGPLNEYERIGLEKAKKEL 341
           E+      +++    ++K++ EL
Sbjct: 323 ELATDVSNDDFLWERIKKSEAEL 345

>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A* Length = 327

 Score =  127 bits (320), Expect = 5e-34
 Identities = 82/321 (25%), Positives = 128/321 (39%), Gaps = 35/321 (10%)

Query: 44  KVAILGAAGGIGQPLA-------MLMKINPLVSVLHLYDVVNTPGVTADISHMDT----G 92
           +VA+ GAAG IG  L        ML K  P++  L L ++        +   M+      
Sbjct: 6   RVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVI--LQLLEIPQAMKA-LEGVVMELEDCAF 62

Query: 93  AVVRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPN 152
            ++ G       + A    D  ++    PRK GM R DL  +N  I       +A+    
Sbjct: 63  PLLAGLEATDDPKVAFKDADYALLVGAAPRKAGMERRDLLQVNGKIFTEQGRALAEVAKK 122

Query: 153 AT-VNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVD 211
              V ++ NP N+   IA    K A   +P+    +T LD  RA   +A+  G     + 
Sbjct: 123 DVKVLVVGNPANTNALIAY---KNAPGLNPRNFTAMTRLDHNRAKAQLAKKTGTGVDRIR 179

Query: 212 VPVVGGHAGVTILPLLSQV----KPPCSFTQEE--TEYLTNRIQNGGTEVVEAKAGAGSA 265
              V G+   T+ P L       +P       E   +     +   G  +++A+ GA SA
Sbjct: 180 RMTVWGNHSSTMFPDLFHAEVDGRPALELVDMEWYEKVFIPTVAQRGAAIIQAR-GASSA 238

Query: 266 TLSMAYAAVK-FADACLRGLRGDAGVVECAFVASQ----VTELPFFASKVRLGRQGAEEI 320
             S A AA++   D  L    GD   V  A V SQ    + E   ++  V   + GA  +
Sbjct: 239 -ASAANAAIEHIRDWALGTPEGD--WVSMA-VPSQGEYGIPEGIVYSFPVT-AKDGAYRV 293

Query: 321 FQLGPLNEYERIGLEKAKKEL 341
            +   +NE+ R  +E   +EL
Sbjct: 294 VEGLEINEFARKRMEITAQEL 314

>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A Length = 303

 Score =  125 bits (316), Expect = 1e-33
 Identities = 55/321 (17%), Positives = 108/321 (33%), Gaps = 46/321 (14%)

Query: 44  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVV-NTPGVTADISHMDTGAVVRGFLGQP 102
           K+ ++G  G +G    + +    +   L L D+   T G T D+   +   V        
Sbjct: 16  KITVVGG-GELGIACTLAISAKGIADRLVLLDLSEGTKGATMDLEIFNLPNVEIS----- 69

Query: 103 QLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPV 162
           +  +A     +VI           +  D+   N  + R L   +     ++ + + S P 
Sbjct: 70  KDLSASAHSKVVIFTVN-SLGSSQSYLDVVQSNVDMFRALVPALGHYSQHSVLLVASQP- 127

Query: 163 NSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGV 221
              V I   V  K  T+   +++G+   LD  R    +  VL       +V V+G   G 
Sbjct: 128 ---VEIMTYVTWKLSTFPANRVIGIGCNLDSQRLQYIITNVLKAQTSGKEVWVIGEQ-GE 183

Query: 222 TILPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACL 281
             +   S  +         +     ++ N   E++  K   G  + S+  +     D+ +
Sbjct: 184 DKVLTWSGQEE------VVSHTSQVQLSNRAMELLRVK---GQRSWSVGLSVADMVDSIV 234

Query: 282 RG----------LRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQLGPLNEYE- 330
                        +G   +    F++     LP       LG  G  E+ +   L E   
Sbjct: 235 NNKKKVHSVSALAKGYYDINSEVFLS-----LP-----CILGTNGVSEVIKT-TLKEDTV 283

Query: 331 RIGLEKAKKELAGSIQKGISF 351
              L+ +   +   +Q+ +  
Sbjct: 284 TEKLQSSASSIHS-LQQQLKL 303

>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans} Length = 304

 Score =  124 bits (315), Expect = 2e-33
 Identities = 73/326 (22%), Positives = 123/326 (37%), Gaps = 48/326 (14%)

Query: 44  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP--GVTADISHMDTGAVVRGFLGQ 101
           KV ++G  G +G   A  + +    S L L D           DI+H             
Sbjct: 2   KVGVVGT-GFVGSTAAFALVLRGSCSELVLVDRDEDRAQAEAEDIAHA------APVSHG 54

Query: 102 PQLE----NALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNL 157
            ++     + L    +VI+ AG  +KPG +R DL   NA I R L   I +  P+A + +
Sbjct: 55  TRVWHGGHSELADAQVVILTAGANQKPGESRLDLLEKNADIFRELVPQITRAAPDAVLLV 114

Query: 158 ISNPVNSTVPIAAEVFKKAGTYDPK-KLLGV-TMLDVVRANTFVAEVLGLDPRDVDVPVV 215
            SNPV+    +  ++  +     P   ++G  T+LD  R    +A+  G+D       V+
Sbjct: 115 TSNPVD----LLTDLATQ---LAPGQPVIGSGTVLDSARFRHLMAQHAGVDGTHAHGYVL 167

Query: 216 GGH-------------AGVTILPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGA 262
           G H             AG+ +   +     P  + ++    +    +N    ++E K   
Sbjct: 168 GEHGDSEVLAWSSAMVAGMPVADFMQAQNLP--WNEQVRAKIDEGTRNAAASIIEGK--- 222

Query: 263 GSATLSMAYAAVKFADACLRGLRGDAGVVECAFVASQVTELPFFASK-VRLGRQGAEEIF 321
            +    +  A  +  +A LR  R          V++   E     S    +GRQG     
Sbjct: 223 RATYYGIGAALARITEAVLRDRR------AVLTVSAPTPEYGVSLSLPRVVGRQGVLSTL 276

Query: 322 QLGPLNEYERIGLEKAKKELAGSIQK 347
               L   E+  LE++   L G  Q+
Sbjct: 277 HP-KLTGDEQQKLEQSAGVLRGFKQQ 301

>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A Length = 329

 Score =  125 bits (315), Expect = 2e-33
 Identities = 75/324 (23%), Positives = 116/324 (35%), Gaps = 39/324 (12%)

Query: 44  KVAILGAAGGIGQPLA-------MLMKINPLVSVLHLYDVVNTP------GVTADISHMD 90
           +VA+ GAAG I   L        ML K  P++  L L ++ N        GV  +I   D
Sbjct: 7   RVAVTGAAGQICYSLLFRIANGDMLGKDQPVI--LQLLEIPNEKAQKALQGVMMEI--DD 62

Query: 91  TGA-VVRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKC 149
               ++ G         A    D+ ++    PR PGM R DL   NA I     + I   
Sbjct: 63  CAFPLLAGMTAHADPMTAFKDADVALLVGARPRGPGMERKDLLEANAQIFTVQGKAIDAV 122

Query: 150 C-PNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEVLGLDPR 208
              N  V ++ NP N+   IA    K A +   K    +  LD  RA + +A   G    
Sbjct: 123 ASRNIKVLVVGNPANTNAYIAM---KSAPSLPAKNFTAMLRLDHNRALSQIAAKTGKPVS 179

Query: 209 DVDVPVVGGHAGVTILPLLSQ-------VKPPCSFTQEETEYLTNRIQNGGTEVVEAKAG 261
            ++   V G+   T+             VK   +      +     +   G  +++A+ G
Sbjct: 180 SIEKLFVWGNHSPTMYADYRYAQIDGASVKDMINDDAWNRDTFLPTVGKRGAAIIDAR-G 238

Query: 262 AGSATLSMAYAAVKFADACLRGLRGDAGVVECAFVASQ----VTELPFFASKVRLGRQGA 317
             SA  S A AA+      + G  G         + S     + E   F   V     G 
Sbjct: 239 VSSA-ASAANAAIDHIHDWVLGTAGK--WTTMG-IPSDGSYGIPEGVIFGFPVTTEN-GE 293

Query: 318 EEIFQLGPLNEYERIGLEKAKKEL 341
            +I Q   ++ + +  +     EL
Sbjct: 294 YKIVQGLSIDAFSQERINVTLNEL 317

>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ojs_A* 2x0i_A* 2x0j_A* Length = 294

 Score =  122 bits (309), Expect = 1e-32
 Identities = 68/322 (21%), Positives = 131/322 (40%), Gaps = 50/322 (15%)

Query: 44  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLGQ 101
           K+  +GA G +G   A    +N  V  + L D+      G   D++H    A        
Sbjct: 2   KLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAH---AAAGIDK--Y 55

Query: 102 PQLENA-----LTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVN 156
           P++        L G +++++ AG+ RKPGMTR DL + NAGI++ + + I +  P + + 
Sbjct: 56  PKIVGGADYSLLKGSEIIVVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIVENAPESKIL 115

Query: 157 LISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRANTFVAEVLGLDPRDVDVPVV 215
           +++NP++    +   +  K       ++ G+   LD  R    +      + R     ++
Sbjct: 116 VVTNPMD----VMTYIMWKESGKPRNEVFGMGNQLDSQRLKERLYNAGARNIRRAW--II 169

Query: 216 GGHAGVTILPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVK 275
           G H G ++    S         + + E + N ++    EV++ K   G+     A A  +
Sbjct: 170 GEH-GDSMFVAKSLADFDG---EVDWEAVENDVRFVAAEVIKRK---GATIFGPAVAIYR 222

Query: 276 FADACLRG----------LRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQLGP 325
              A +            L+G+ G+                    +LG+ GA E+  +  
Sbjct: 223 MVKAVVEDTGEIIPTSMILQGEYGIENV-----------AVGVPAKLGKNGA-EVADI-K 269

Query: 326 LNEYERIGLEKAKKELAGSIQK 347
           L++ E   L  + K L   +++
Sbjct: 270 LSDEEIEKLRNSAKILRERLEE 291

>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1 Length = 309

 Score =  119 bits (301), Expect = 2e-31
 Identities = 61/324 (18%), Positives = 112/324 (34%), Gaps = 42/324 (12%)

Query: 44  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP--GVTADISHMDTGAVVRGFLGQ 101
           K+ I+G  G +G  +A  +    +       D           D             L  
Sbjct: 3   KIGIIGL-GNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDA------MANLEA 55

Query: 102 PQLENA-----LTGMDLVIIPAGVPR----KPGMTRDDLFNINAGIVRTLCEGIAKCCPN 152
                      L   D+VI   G  +     P   R       + +V+++   + +   +
Sbjct: 56  HGNIVINDWAALADADVVISTLGNIKLQQDNPTGDRFAELKFTSSMVQSVGTNLKESGFH 115

Query: 153 ATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRANTFVAEVLGLDPRDVD 211
             + +ISNPV+    +   +F+    +   K++G  T+LD  R    V E   LDPR V 
Sbjct: 116 GVLVVISNPVD----VITALFQHVTGFPAHKVIGTGTLLDTARMQRAVGEAFDLDPRSVS 171

Query: 212 VPVVGGHAGVTILPLLSQV----KPPCSFTQEETEYLTN---RIQNGGTEVVEAKAGAGS 264
              +G H G +     S V    +P  +        L       + GG  V+  K   G 
Sbjct: 172 GYNLGEH-GNSQFVAWSTVRVMGQPIVTLADAGDIDLAAIEEEARKGGFTVLNGK---GY 227

Query: 265 ATLSMAYAAVKFADACLRGLRGDAGVVECAFVASQVTELPFFASK-VRLGRQGAEEIFQL 323
            +  +A +A++ A A +              V+++  ++  + S    +GR G      L
Sbjct: 228 TSYGVATSAIRIAKAVMADAH------AELVVSNRRDDMGMYLSYPAIIGRDGVLAETTL 281

Query: 324 GPLNEYERIGLEKAKKELAGSIQK 347
             L   E+  L +++  +     +
Sbjct: 282 -DLTTDEQEKLLQSRDYIQQRFDE 304

>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1 Length = 330

 Score =  119 bits (300), Expect = 4e-31
 Identities = 64/332 (19%), Positives = 115/332 (34%), Gaps = 48/332 (14%)

Query: 44  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLGQ 101
           K+ ++G    +G   A+ + +  L   + L DV+     G   D+ H   G++   FL  
Sbjct: 23  KITVVGC-DAVGMADAISVLMKDLADEVALVDVMEDKLKGEMMDLEH---GSL---FLHT 75

Query: 102 PQLE-----NALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVN 156
            ++      +   G  LV+I AG  ++ G +R +L   N  I + +   I K  P+    
Sbjct: 76  AKIVSGKDYSVSAGSKLVVITAGARQQEGESRLNLVQRNVNIFKFIIPNIVKHSPDCLKE 135

Query: 157 LISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRANTFVAEVLGLDPRDVDVPVV 215
           L             +   K       +++G    LD  R    + E LG+    V   V+
Sbjct: 136 LHPELGT----DKNKQDWKLSGLPMHRIIGSGCNLDSARFRYLMGERLGVHSCLVIGWVI 191

Query: 216 GGHAGVTILPLLSQV---KPPCSF--TQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMA 270
           G H G ++  + S +   K       +  E   L          VV       +      
Sbjct: 192 GQH-GDSVPSVWSGMWDAKLHKDVVDSAYEVIKLKGYTSWAIGLVVSNPVDVLTYVAWKG 250

Query: 271 YAAVKFADACLRG----------LRGDAGVVECAFVASQVTELPFFASKVRLGRQGAE-E 319
            +    A   ++           ++   G+ +  F++     LP       L    +   
Sbjct: 251 CSVADLAQTIMKDLCRVHPVSTMVKDFYGIKDNVFLS-----LP-----CVLNNGISHCN 300

Query: 320 IFQLGPLNEYERIGLEKAKKELAGSIQKGISF 351
           I ++  L   E   L+K+   L   IQK + F
Sbjct: 301 IVKM-KLKPDEEQQLQKSATTLW-DIQKDLKF 330

>1obb_A Maltase, alpha-glucosidase; glycosidase, sulfinic acid, NAD+, maltose, hydrolase; HET: MAL NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2 Length = 480

 Score = 53.7 bits (128), Expect = 4e-08
 Identities = 40/210 (19%), Positives = 64/210 (30%), Gaps = 45/210 (21%)

Query: 41  AGFKVAILGAAGGIGQP---LAMLMKINPL-VSVLHLYDV----VNTPGVTADISHMDTG 92
              K+ I+GA G        ++ L K   L  S + L D+    ++     A     + G
Sbjct: 2   PSVKIGIIGA-GSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDAILTIAKKYVEEVG 60

Query: 93  AVVRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRT----------- 141
           A ++ F     L++ +   D VI  A V     + +        G  R            
Sbjct: 61  ADLK-FEKTMNLDDVIIDADFVINTAMVGGHTYLEKVRQIGEKYGYYRGIDAQEFNMVSD 119

Query: 142 ---------------LCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLG 186
                          +   I K  P A     +NP+         +  +     P K +G
Sbjct: 120 YYTFSNYNQLKYFVDIARKIEKLSPKAWYLQAANPIFEG----TTLVTRTV---PIKAVG 172

Query: 187 VTMLDVVRANTFVAEVLGLDPRDVDVPVVG 216
                       + E LGL+   VD  V G
Sbjct: 173 FC--HGHYGVMEIVEKLGLEEEKVDWQVAG 200

>3fef_A Putative glucosidase LPLD; gulosidase, structural genomics, unknown function, glycosidase, hydrolase, manganese, metal-binding, NAD, PSI- 2; 2.20A {Bacillus subtilis} Length = 450

 Score = 51.3 bits (122), Expect = 2e-07
 Identities = 35/204 (17%), Positives = 64/204 (31%), Gaps = 28/204 (13%)

Query: 41  AGFKVAILGAAGGIG---QPLAMLMKINPLVSVLHLYDVVNT-PGVTADISHMDTGAVVR 96
              K+A +G  G  G     ++ L     +   + LYD+          I +       R
Sbjct: 4   DQIKIAYIGG-GSQGWARSLMSDLSIDERMSGTVALYDLDFEAAQKNEVIGNHSGNGRWR 62

Query: 97  GFLGQPQLENALTGMDLVIIPAGV------------PRKPGMTRDDLFNINAG------- 137
            +     L+ AL+  D+VII                P + G+ +     +  G       
Sbjct: 63  -YEAVSTLKKALSAADIVIISILPGSLDDMEVDVHLPERCGIYQSVGDTVGPGGIIRGLR 121

Query: 138 ---IVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVR 194
              I   +   I    P + V   +NP++    +  +VF           +  T   +  
Sbjct: 122 AVPIFAEIARAIRDYAPESWVINYTNPMSVCTRVLYKVFPGIKAIGCCHEVFGTQKLLAE 181

Query: 195 ANTFVAEVLGLDPRDVDVPVVGGH 218
             T    +      D+ V V+G +
Sbjct: 182 MVTERLGIEVPRREDIRVNVLGIN 205

>1u8x_X Maltose-6'-phosphate glucosidase; structural genomics, PSI, protein structure initiative, MCSG glucosidase, NAD-dependent; HET: G6P NAD; 2.05A {Bacillus subtilis} SCOP: c.2.1.5 d.162.1.2 Length = 472

 Score = 50.5 bits (120), Expect = 3e-07
 Identities = 39/251 (15%), Positives = 75/251 (29%), Gaps = 42/251 (16%)

Query: 30  RQAKCRAKGGAAGFKVAILGAAGGIGQP---LAMLMKINPL-VSVLHLYDV----VNTPG 81
                ++      F + I G  G    P   L +L  +    +  L LYD      +   
Sbjct: 16  ENLYFQSNMKKKSFSIVIAGG-GSTFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIA 74

Query: 82  VTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRT 141
              D+   +    +  F      E A T +D V+    V +      D+   +  G+V  
Sbjct: 75  GACDVFIREKAPDIE-FAATTDPEEAFTDVDFVMAHIRVGKYAMRALDEQIPLKYGVVGQ 133

Query: 142 --------------------LCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDP 181
                               + + + K  P+A +   SNP          +         
Sbjct: 134 ETCGPGGIAYGMRSIGGVLEILDYMEKYSPDAWMLNYSNPAAIVAEATRRLRPN------ 187

Query: 182 KKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPCSFTQEET 241
            K+L +  +  V     +A++LGL  R     +   + G+      + ++       +  
Sbjct: 188 SKILNICDM-PVGIEDRMAQILGLSSRKE---MKVRYYGLNHFGWWTSIQDQE--GNDLM 241

Query: 242 EYLTNRIQNGG 252
             L   +   G
Sbjct: 242 PKLKEHVSQYG 252

>1s6y_A 6-phospho-beta-glucosidase; hydrolase, structural genomics, PSI, protein structure initi midwest center for structural genomics; 2.31A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.2 Length = 450

 Score = 45.5 bits (107), Expect = 1e-05
 Identities = 33/204 (16%), Positives = 63/204 (30%), Gaps = 37/204 (18%)

Query: 42  GFKVAILGA----AGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHM-----DTG 92
             K+A +G        + + L       P V  L L D+         +  +     +  
Sbjct: 7   RLKIATIGGGSSYTPELVEGLIKRYHELP-VGELWLVDIPEGKEKLEIVGALAKRMVEKA 65

Query: 93  AVVRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRT----------- 141
            V            AL G D V     V       +D+   +  G++             
Sbjct: 66  GVPIEIHLTLDRRRALDGADFVTTQFRVGGLEARAKDERIPLKYGVIGQETNGPGGLFKG 125

Query: 142 ---------LCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDV 192
                    +   + + CP+A +   +NP            K+      +K++G+  +  
Sbjct: 126 LRTIPVILDIIRDMEELCPDAWLINFTNPAGMVTEAVLRYTKQ------EKVVGLCNV-P 178

Query: 193 VRANTFVAEVLGLDPRDVDVPVVG 216
           +     VA++LG+D   V +   G
Sbjct: 179 IGMRMGVAKLLGVDADRVHIDFAG 202

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 41.4 bits (96), Expect = 4e-04
 Identities = 52/280 (18%), Positives = 84/280 (30%), Gaps = 87/280 (31%)

Query: 11  IARISAHLYPPNLQENSCLRQAKCRAKGGAAGFKVAILGAAGGIGQPLAMLMKINPLVSV 70
           ++R+  +L    L++   L + +  AK       V I G   G G       K     + 
Sbjct: 131 VSRLQPYL---KLRQ--ALLELR-PAKN------VLIDGV-LGSG-------K-----TW 165

Query: 71  LHLYDVVNTPGVTADISHMDTGAVVRGF---LGQPQLENALTGM--DL--VIIPAGVPRK 123
           + L DV  +  V      MD       F   L        +  M   L   I P    R 
Sbjct: 166 VAL-DVCLSYKV---QCKMDFKI----FWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRS 217

Query: 124 PGM--TRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDP 181
                 +  + +I A + R L     K   N    L+   V +     A+ +     ++ 
Sbjct: 218 DHSSNIKLRIHSIQAELRRLLKS---KPYENCL--LVLLNVQN-----AKAWN---AFNL 264

Query: 182 K-KLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPCSFTQEE 240
             K+L +T        T          R   V      A  T + L        + T +E
Sbjct: 265 SCKIL-LT--------T----------RFKQVTDFLSAATTTHISL---DHHSMTLTPDE 302

Query: 241 TE-----YLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVK 275
            +     YL  R Q       E         LS+   +++
Sbjct: 303 VKSLLLKYLDCRPQ---DLPREVLTTNPRR-LSIIAESIR 338

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 40.6 bits (94), Expect = 8e-04
 Identities = 46/316 (14%), Positives = 80/316 (25%), Gaps = 111/316 (35%)

Query: 9   QRIARISAHLYPPNLQEN-------------SCLRQAKCRAKG--GAAGFKVAILGAAGG 53
           Q   ++   L    L+               + +    C +        FK+  L     
Sbjct: 135 QPYLKLRQALL--ELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNL-KN 191

Query: 54  IGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHM--------DTGAVVRGFLGQPQLE 105
              P  +L  +  L+  +        P  T+   H            A +R  L     E
Sbjct: 192 CNSPETVLEMLQKLLYQI-------DPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYE 244

Query: 106 NALTGMD-----------------LVIIPAGVPRKPGMTRD----DLFNINAGIVRTLCE 144
           N L  +                  L+            TR     D  +       +L  
Sbjct: 245 NCLLVLLNVQNAKAWNAFNLSCKILLT-----------TRFKQVTDFLSAATTTHISLDH 293

Query: 145 GIAKCCPNATVNLISN---------P--VNSTVP-----IAAEVFKKAGTYDP------K 182
                 P+   +L+           P  V +T P     IA  +     T+D        
Sbjct: 294 HSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCD 353

Query: 183 KL-----LGVTMLD--VVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLL-SQVKPPC 234
           KL       + +L+    R   F    L + P    +P         +L L+   V    
Sbjct: 354 KLTTIIESSLNVLEPAEYRKM-FDR--LSVFPPSAHIP-------TILLSLIWFDVIK-- 401

Query: 235 SFTQEETEYLTNRIQN 250
                +   + N++  
Sbjct: 402 ----SDVMVVVNKLHK 413

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	354
3hhp_A	312	Malate dehydrogenase; MDH, citric acid cycle, TCA	100.0
1mld_A	314	Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D	100.0
4aj2_A	331	L-lactate dehydrogenase A chain; oxidoreductase-in	100.0
2x0j_A	294	Malate dehydrogenase; oxidoreductase, hyperthermop	100.0
1smk_A	326	Malate dehydrogenase, glyoxysomal; tricarboxylic c	100.0
3nep_X	314	Malate dehydrogenase; halophIle, molecular adpatat	100.0
3p7m_A	321	Malate dehydrogenase; putative dehydrogenase, enzy	100.0
3vku_A	326	L-LDH, L-lactate dehydrogenase; rossmann fold, NAD	100.0
1oju_A	294	MDH, malate dehydrogenase; hyperthermophilic, oxid	100.0
3gvi_A	324	Malate dehydrogenase; NAD, oxidoreductase, tricarb	100.0
3pqe_A	326	L-LDH, L-lactate dehydrogenase; FBP, oxidoreductas	100.0
3tl2_A	315	Malate dehydrogenase; center for structural genomi	100.0
3fi9_A	343	Malate dehydrogenase; structural genomics, oxidore	100.0
2zqz_A	326	L-LDH, L-lactate dehydrogenase; oxidoreductase, ro	100.0
1ez4_A	318	Lactate dehydrogenase; rossmann fold, oxidoreducta	100.0
7mdh_A	375	Protein (malate dehydrogenase); chloroplastic mala	100.0
5mdh_A	333	Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH	100.0
4h7p_A	345	Malate dehydrogenase; ssgcid, structural G seattle	100.0
2xxj_A	310	L-LDH, L-lactate dehydrogenase; oxidoreductase, hy	100.0
2d4a_B	308	Malate dehydrogenase; archaea, hyperthermophIle, o	100.0
3ldh_A	330	Lactate dehydrogenase; oxidoreductase, CHOH donor,	100.0
1o6z_A	303	MDH, malate dehydrogenase; halophilic, ION-binding	100.0
3d0o_A	317	L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, gly	100.0
1y6j_A	318	L-lactate dehydrogenase; southeast collaboratory f	100.0
1ur5_A	309	Malate dehydrogenase; oxidoreductase, tricarboxyli	100.0
1hye_A	313	L-lactate/malate dehydrogenase; nucleotide binding	100.0
1ldn_A	316	L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NA	100.0
2i6t_A	303	Ubiquitin-conjugating enzyme E2-like isoform A; L-	100.0
1t2d_A	322	LDH-P, L-lactate dehydrogenase; ternary complex, o	100.0
1pzg_A	331	LDH, lactate dehydrogenase; apicomplexa, APAD, tet	100.0
2hjr_A	328	Malate dehydrogenase; malaria, structural genomics	100.0
1b8p_A	329	Protein (malate dehydrogenase); oxidoreductase; 1.	100.0
1guz_A	310	Malate dehydrogenase; oxidoreductase, tricarboxyli	100.0
2v6b_A	304	L-LDH, L-lactate dehydrogenase; oxidoreductase, ra	100.0
1a5z_A	319	L-lactate dehydrogenase; oxidoreductase, glycolysi	100.0
1hyh_A	309	L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2	100.0
2ewd_A	317	Lactate dehydrogenase,; protein-substrate_cofactor	100.0
1y7t_A	327	Malate dehydrogenase; NAD-dependent-MDH-NADPH comp	100.0
1up7_A	417	6-phospho-beta-glucosidase; hydrolase, family4 hyd	100.0
1s6y_A	450	6-phospho-beta-glucosidase; hydrolase, structural	100.0
1lld_A	319	L-lactate dehydrogenase; oxidoreductase(CHOH (D)-N	100.0
1u8x_X	472	Maltose-6'-phosphate glucosidase; structural genom	100.0
3fef_A	450	Putative glucosidase LPLD; gulosidase, structural	99.98
1obb_A	480	Maltase, alpha-glucosidase; glycosidase, sulfinic	99.97
3u95_A	477	Glycoside hydrolase, family 4; hydrolysis, cytosol	99.96
3ado_A	319	Lambda-crystallin; L-gulonate 3-dehydrogenase, str	98.78
4id9_A	347	Short-chain dehydrogenase/reductase; putative dehy	98.63
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	98.59
4egb_A	346	DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce	98.51
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	98.5
3zwc_A	742	Peroxisomal bifunctional enzyme; beta oxidation pa	98.48
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	98.45
3ko8_A	312	NAD-dependent epimerase/dehydratase; isomerase, UD	98.43
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	98.41
4fgw_A	391	Glycerol-3-phosphate dehydrogenase [NAD(+)] 1; oxi	98.37
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	98.36
1rpn_A	335	GDP-mannose 4,6-dehydratase; short-chain dehydroge	98.36
2rh8_A	338	Anthocyanidin reductase; flavonoids, rossmann fold	98.35
1r6d_A	337	TDP-glucose-4,6-dehydratase; rossmann fold, short-	98.34
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	98.33
4e12_A	283	Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1	98.32
1orr_A	347	CDP-tyvelose-2-epimerase; rossmann fold, short-cha	98.31
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	98.3
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	98.3
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	98.3
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	98.3
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	98.28
2hun_A	336	336AA long hypothetical DTDP-glucose 4,6-dehydrat;	98.28
1kew_A	361	RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo	98.28
2z1m_A	345	GDP-D-mannose dehydratase; short-chain dehydrogena	98.28
3ehe_A	313	UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC,	98.27
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	98.27
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	98.25
2dpo_A	319	L-gulonate 3-dehydrogenase; structural genomics, N	98.25
1oc2_A	348	DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos	98.24
3vtf_A	444	UDP-glucose 6-dehydrogenase; two discrete alpha/be	98.23
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	98.23
3k6j_A	460	Protein F01G10.3, confirmed by transcript evidenc;	98.21
3enk_A	341	UDP-glucose 4-epimerase; seattle structural genomi	98.2
3gg2_A	450	Sugar dehydrogenase, UDP-glucose/GDP-mannose dehyd	98.2
3g79_A	478	NDP-N-acetyl-D-galactosaminuronic acid dehydrogen;	98.18
2o3j_A	481	UDP-glucose 6-dehydrogenase; structural genomics,	98.18
4b4o_A	298	Epimerase family protein SDR39U1; isomerase; HET:	98.16
1mv8_A	436	GMD, GDP-mannose 6-dehydrogenase; rossman fold, do	98.16
2x6t_A	357	ADP-L-glycero-D-manno-heptose-6-epimerase; isomera	98.15
3oh8_A	516	Nucleoside-diphosphate sugar epimerase (SULA FAMI;	98.15
3k96_A	356	Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA	98.15
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	98.14
1eq2_A	310	ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin	98.12
1dlj_A	402	UDP-glucose dehydrogenase; rossmann fold, ternary	98.12
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	98.11
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	98.11
1vl0_A	292	DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s	98.1
1zcj_A	463	Peroxisomal bifunctional enzyme; peroxisomal multi	98.09
3pid_A	432	UDP-glucose 6-dehydrogenase; rossmann fold, oxidor	98.09
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	98.08
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	98.07
2bll_A	345	Protein YFBG; decarboxylase, short chain dehydroge	98.07
4dqv_A	478	Probable peptide synthetase NRP (peptide synthase;	98.07
1f0y_A	302	HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive	98.06
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	98.06
2y0c_A	478	BCEC, UDP-glucose dehydrogenase; oxidoreductase, c	98.05
2b69_A	343	UDP-glucuronate decarboxylase 1; UDP-glucoronic ac	98.05
2c20_A	330	UDP-glucose 4-epimerase; carbohydrate metabolism,	98.05
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	98.05
3mog_A	483	Probable 3-hydroxybutyryl-COA dehydrogenase; struc	98.04
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	98.03
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	98.02
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	98.01
3sc6_A	287	DTDP-4-dehydrorhamnose reductase; RFBD, structural	98.01
1zej_A	293	HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural	98.01
1db3_A	372	GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya	98.0
3st7_A	369	Capsular polysaccharide synthesis enzyme CAP5F; ro	98.0
2wtb_A	725	MFP2, fatty acid multifunctional protein (ATMFP2);	98.0
2a35_A	215	Hypothetical protein PA4017; alpha-beta-alpha sand	98.0
2pk3_A	321	GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor	98.0
1e6u_A	321	GDP-fucose synthetase; epimerase/reductase, SDR, R	97.99
2p5y_A	311	UDP-glucose 4-epimerase; TTHA0591, structural geno	97.99
1ek6_A	348	UDP-galactose 4-epimerase; short-chain dehydrogena	97.99
1xq6_A	253	Unknown protein; structural genomics, protein stru	97.99
2ydy_A	315	Methionine adenosyltransferase 2 subunit beta; oxi	97.97
4huj_A	220	Uncharacterized protein; PSI-biology, nysgrc, stru	97.97
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	97.97
1udb_A	338	Epimerase, UDP-galactose-4-epimerase; isomerase; H	97.96
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	97.95
3ay3_A	267	NAD-dependent epimerase/dehydratase; glucuronic ac	97.94
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	97.93
1i24_A	404	Sulfolipid biosynthesis protein SQD1; SDR, short-c	97.93
2ew2_A	316	2-dehydropantoate 2-reductase, putative; alpha-str	97.92
4a7p_A	446	UDP-glucose dehydrogenase; oxidoreductase, carbohy	97.92
3vps_A	321	TUNA, NAD-dependent epimerase/dehydratase; tunicam	97.91
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	97.91
1n2s_A	299	DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold	97.9
1jay_A	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma	97.9
2rcy_A	262	Pyrroline carboxylate reductase; malaria, structur	97.9
1x0v_A	354	GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase	97.89
1gy8_A	397	UDP-galactose 4-epimerase; oxidoreductase; HET: NA	97.88
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	97.88
3dtt_A	245	NADP oxidoreductase; structural genomics, joint ce	97.86
3ggo_A	314	Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-b	97.86
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	97.86
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	97.86
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	97.84
2hrz_A	342	AGR_C_4963P, nucleoside-diphosphate-sugar epimeras	97.84
3i83_A	320	2-dehydropantoate 2-reductase; structural genomics	97.84
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	97.83
4dll_A	320	2-hydroxy-3-oxopropionate reductase; structural ge	97.83
3doj_A	310	AT3G25530, dehydrogenase-like protein; gamma-hydro	97.83
2v6g_A	364	Progesterone 5-beta-reductase; tyrosine-dependent	97.82
2yy7_A	312	L-threonine dehydrogenase; thermolabIle, flavobact	97.81
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	97.81
2raf_A	209	Putative dinucleotide-binding oxidoreductase; NP_7	97.8
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	97.79
4b8w_A	319	GDP-L-fucose synthase; oxidoreductase; HET: NAP GD	97.78
2h78_A	302	Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC601	97.78
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	97.77
3tri_A	280	Pyrroline-5-carboxylate reductase; amino acid bios	97.77
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	97.77
2q3e_A	467	UDP-glucose 6-dehydrogenase; hexamer, structural g	97.76
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	97.76
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	97.75
3pef_A	287	6-phosphogluconate dehydrogenase, NAD-binding; gam	97.74
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	97.73
1n7h_A	381	GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR,	97.73
1z45_A	699	GAL10 bifunctional protein; epimerase, mutarotase,	97.72
2izz_A	322	Pyrroline-5-carboxylate reductase 1; amino-acid bi	97.71
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	97.71
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	97.71
1yj8_A	375	Glycerol-3-phosphate dehydrogenase; SGPP, structur	97.7
1t2a_A	375	GDP-mannose 4,6 dehydratase; structural genomics c	97.7
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	97.7
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	97.7
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	97.69
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	97.69
3qsg_A	312	NAD-binding phosphogluconate dehydrogenase-like P;	97.69
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	97.69
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	97.69
4f6c_A	427	AUSA reductase domain protein; thioester reductase	97.68
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	97.68
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	97.67
1lss_A	140	TRK system potassium uptake protein TRKA homolog;	97.66
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	97.66
3ajr_A	317	NDP-sugar epimerase; L-threonine dehydrogenase, L-	97.66
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	97.64
1wdk_A	715	Fatty oxidation complex alpha subunit; alpha2BETA2	97.64
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	97.64
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	97.63
3b1f_A	290	Putative prephenate dehydrogenase; enzyme, 4-hydro	97.63
3qha_A	296	Putative oxidoreductase; seattle structural genomi	97.62
3hwr_A	318	2-dehydropantoate 2-reductase; YP_299159.1, PANE/A	97.62
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	97.62
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	97.62
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	97.62
2g5c_A	281	Prephenate dehydrogenase; TYRA, oxidoreductase; HE	97.62
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	97.61
1ks9_A	291	KPA reductase;, 2-dehydropantoate 2-reductase; PAN	97.61
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	97.61
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	97.61
1spx_A	278	Short-chain reductase family member (5L265); paral	97.61
4imr_A	275	3-oxoacyl-(acyl-carrier-protein) reductase; oxidor	97.61
1z82_A	335	Glycerol-3-phosphate dehydrogenase; TM0378, struct	97.61
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	97.6
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	97.6
1txg_A	335	Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxid	97.6
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	97.6
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	97.6
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	97.6
3cxt_A	291	Dehydrogenase with different specificities; rossma	97.6
1z7e_A	660	Protein aRNA; rossmann fold, OB-like fold, hydrola	97.59
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	97.59
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	97.59
3ghy_A	335	Ketopantoate reductase protein; oxidoreductase, NA	97.59
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	97.59
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	97.58
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	97.58
3g0o_A	303	3-hydroxyisobutyrate dehydrogenase; NAD(P), valine	97.58
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	97.58
3d1l_A	266	Putative NADP oxidoreductase BF3122; structural ge	97.58
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	97.58
3pdu_A	287	3-hydroxyisobutyrate dehydrogenase family protein;	97.57
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	97.57
3ic5_A	118	Putative saccharopine dehydrogenase; structural ge	97.57
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	97.57
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	97.56
3hn2_A	312	2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, str	97.56
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	97.56
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	97.56
3imf_A	257	Short chain dehydrogenase; structural genomics, in	97.56
2ggs_A	273	273AA long hypothetical DTDP-4-dehydrorhamnose red	97.55
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	97.55
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	97.55
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	97.55
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	97.55
3l6d_A	306	Putative oxidoreductase; structural genomics, prot	97.55
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	97.54
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	97.54
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	97.54
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	97.54
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	97.53
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	97.53
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	97.53
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	97.52
2f1k_A	279	Prephenate dehydrogenase; tyrosine synthesis, X-RA	97.52
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	97.52
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	97.52
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	97.52
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	97.52
1yb4_A	295	Tartronic semialdehyde reductase; structural genom	97.51
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	97.51
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	97.51
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	97.51
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	97.51
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	97.51
3c24_A	286	Putative oxidoreductase; YP_511008.1, structural g	97.5
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	97.5
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	97.5
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	97.5
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	97.5
4ezb_A	317	Uncharacterized conserved protein; structural geno	97.5
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	97.49
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	97.49
4e21_A	358	6-phosphogluconate dehydrogenase (decarboxylating;	97.48
4ibo_A	271	Gluconate dehydrogenase; enzyme function initiativ	97.47
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	97.47
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	97.47
4f6l_B	508	AUSA reductase domain protein; thioester reductase	97.47
3gt0_A	247	Pyrroline-5-carboxylate reductase; structural geno	97.47
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	97.46
1bg6_A	359	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L	97.46
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	97.46
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	97.46
3c85_A	183	Putative glutathione-regulated potassium-efflux S	97.46
2vns_A	215	Metalloreductase steap3; metal-binding, transmembr	97.46
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	97.45
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	97.45
1xq1_A	266	Putative tropinone reducatse; structural genomics,	97.45
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	97.45
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	97.45
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	97.45
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	97.44
2pv7_A	298	T-protein [includes: chorismate mutase (EC 5.4.99	97.44
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	97.44
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	97.44
1evy_A	366	Glycerol-3-phosphate dehydrogenase; rossmann fold,	97.43
2g1u_A	155	Hypothetical protein TM1088A; structural genomics,	97.43
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	97.43
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	97.43
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	97.43
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	97.43
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	97.43
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	97.43
3ego_A	307	Probable 2-dehydropantoate 2-reductase; structural	97.42
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	97.42
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	97.41
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	97.41
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	97.41
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	97.4
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	97.4
3rih_A	293	Short chain dehydrogenase or reductase; structural	97.4
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	97.4
1vpd_A	299	Tartronate semialdehyde reductase; structural geno	97.4
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	97.39
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	97.39
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	97.39
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	97.38
3cky_A	301	2-hydroxymethyl glutarate dehydrogenase; rossmann	97.38
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	97.38
3l9w_A	413	Glutathione-regulated potassium-efflux system Pro	97.38
2cvz_A	289	Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase;	97.38
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	97.38
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	97.37
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	97.37
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	97.37
2hmt_A	144	YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane	97.37
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	97.37
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	97.37
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	97.37
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	97.37
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	97.36
4dqx_A	277	Probable oxidoreductase protein; structural genomi	97.36
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	97.36
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	97.35
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	97.35
2uyy_A	316	N-PAC protein; long-chain dehydrogenase, cytokine;	97.35
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	97.35
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	97.34
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	97.33
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	97.33
4gwg_A	484	6-phosphogluconate dehydrogenase, decarboxylating;	97.33
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	97.33
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	97.33
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	97.33
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	97.33
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	97.33
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	97.32
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	97.32
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	97.32
4iin_A	271	3-ketoacyl-acyl carrier protein reductase (FABG);	97.31
2zyd_A	480	6-phosphogluconate dehydrogenase, decarboxylating;	97.31
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	97.31
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	97.31
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	97.3
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	97.3
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	97.3
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	97.3
3c7a_A	404	Octopine dehydrogenase; L) stereospecific opine de	97.29
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	97.29
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	97.29
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	97.29
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	97.28
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	97.28
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	97.28
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	97.27
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	97.26
1pgj_A	478	6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; o	97.25
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	97.25
2iz1_A	474	6-phosphogluconate dehydrogenase, decarboxylating;	97.25
1yqg_A	263	Pyrroline-5-carboxylate reductase; structural geno	97.24
1id1_A	153	Putative potassium channel protein; RCK domain, E.	97.24
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	97.24
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	97.22
3oj0_A	144	Glutr, glutamyl-tRNA reductase; structural genomic	97.22
3g17_A	294	Similar to 2-dehydropantoate 2-reductase; structur	97.22
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	97.22
1i36_A	264	Conserved hypothetical protein MTH1747; NADP bindi	97.21
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	97.21
1xkq_A	280	Short-chain reductase family member (5D234); parra	97.2
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	97.18
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	97.17
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	97.17
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	97.17
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	97.16
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	97.16
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	97.15
1xhl_A	297	Short-chain dehydrogenase/reductase family member	97.15
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	97.15
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	97.15
2p4q_A	497	6-phosphogluconate dehydrogenase, decarboxylating;	97.14
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	97.14
2pgd_A	482	6-phosphogluconate dehydrogenase; oxidoreductase (	97.14
2qyt_A	317	2-dehydropantoate 2-reductase; APC81190, porphyrom	97.13
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	97.13
2ahr_A	259	Putative pyrroline carboxylate reductase; pyrrolin	97.12
3llv_A	141	Exopolyphosphatase-related protein; NAD(P)-binding	97.12
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	97.12
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	97.12
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	97.12
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	97.11
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	97.11
4iiu_A	267	3-oxoacyl-[acyl-carrier protein] reductase; struct	97.1
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	97.1
2gf2_A	296	Hibadh, 3-hydroxyisobutyrate dehydrogenase; struct	97.1
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	97.09
3fwz_A	140	Inner membrane protein YBAL; TRKA-N domain, E.coli	97.08
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	97.08
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	97.07
3obb_A	300	Probable 3-hydroxyisobutyrate dehydrogenase; struc	97.06
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	97.04
3ktd_A	341	Prephenate dehydrogenase; structural genomics, joi	97.02
3l4b_C	218	TRKA K+ channel protien TM1088B; potassium channel	97.02
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	96.99
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	96.99
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	96.97
4gbj_A	297	6-phosphogluconate dehydrogenase NAD-binding; stru	96.96
3uce_A	223	Dehydrogenase; rossmann fold, oxidoreductase; HET:	96.96
1np3_A	338	Ketol-acid reductoisomerase; A DEEP figure-OF-eigh	96.95
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	96.95
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	96.93
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	96.93
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	96.93
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	96.92
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	96.91
4hp8_A	247	2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi	96.91
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	96.89
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	96.88
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	96.88
3ojo_A	431	CAP5O; rossmann fold, complex with cofactor NAD an	96.87
2fr1_A	486	Erythromycin synthase, eryai; short chain dehydrog	96.83
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	96.82
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	96.81
3abi_A	365	Putative uncharacterized protein PH1688; L-lysine	96.78
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	96.75
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	96.74
4e4y_A	244	Short chain dehydrogenase family protein; structur	96.72
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	96.7
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	96.7
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	96.68
4dgs_A	340	Dehydrogenase; structural genomics, PSI-biology, N	96.67
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	96.67
3h9u_A	436	Adenosylhomocysteinase; NAD CO-factor complex, str	96.65
3ba1_A	333	HPPR, hydroxyphenylpyruvate reductase; two domain	96.65
2yjz_A	201	Metalloreductase steap4; oxidoreductase, metabolic	95.67
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	96.61
3ged_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	96.61
4f3y_A	272	DHPR, dihydrodipicolinate reductase; structural ge	96.56
2z5l_A	511	Tylkr1, tylactone synthase starter module and modu	96.56
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	96.55
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	96.47
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	96.41
3gvp_A	435	Adenosylhomocysteinase 3; protein CO-factor comple	96.38
3dfz_A	223	SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase	96.37
3jtm_A	351	Formate dehydrogenase, mitochondrial; mitochondrio	96.36
4fs3_A	256	Enoyl-[acyl-carrier-protein] reductase [NADPH] FA;	96.35
2i76_A	276	Hypothetical protein; NADP, dehydrogenase, TM1727,	96.35
1vl6_A	388	Malate oxidoreductase; TM0542, NAD-dependent malic	96.3
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	96.29
2w2k_A	348	D-mandelate dehydrogenase; 2-hydroxyacid dehydroge	96.29
2gcg_A	330	Glyoxylate reductase/hydroxypyruvate reductase; NA	96.27
2i99_A	312	MU-crystallin homolog; thyroid hormine binding pro	96.26
1wwk_A	307	Phosphoglycerate dehydrogenase; riken structural g	96.23
1x7d_A	350	Ornithine cyclodeaminase; binds NAD+, binds L-orni	96.21
3pp8_A	315	Glyoxylate/hydroxypyruvate reductase A; structural	96.21
4g2n_A	345	D-isomer specific 2-hydroxyacid dehydrogenase, Na;	96.19
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	96.19
4dio_A	405	NAD(P) transhydrogenase subunit alpha PART 1; stru	96.16
1jw9_B	249	Molybdopterin biosynthesis MOEB protein; MOEB: mod	96.15
4b79_A	242	PA4098, probable short-chain dehydrogenase; oxidor	96.12
3eag_A	326	UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME	96.1
3d4o_A	293	Dipicolinate synthase subunit A; NP_243269.1, stru	96.1
4ina_A	405	Saccharopine dehydrogenase; structural genomics, P	96.06
3p2y_A	381	Alanine dehydrogenase/pyridine nucleotide transhy;	96.06
1mx3_A	347	CTBP1, C-terminal binding protein 1; nuclear prote	96.03
2g76_A	335	3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidor	96.03
3hdj_A	313	Probable ornithine cyclodeaminase; APC62486, borde	96.01
4gkb_A	258	3-oxoacyl-[acyl-carrier protein] reductase; putati	96.0
3n58_A	464	Adenosylhomocysteinase; ssgcid, hydrolase, structu	95.99
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	95.97
2dbq_A	334	Glyoxylate reductase; D-3-phosphoglycerate dehydro	95.95
2a9f_A	398	Putative malic enzyme ((S)-malate:NAD+ oxidoreduct	95.94
2cuk_A	311	Glycerate dehydrogenase/glyoxylate reductase; stru	95.89
2hk9_A	275	Shikimate dehydrogenase; shikimate pathway, drug d	95.82
4g65_A	461	TRK system potassium uptake protein TRKA; structur	95.82
2nqt_A	352	N-acetyl-gamma-glutamyl-phosphate reductase; apopr	95.81
1omo_A	322	Alanine dehydrogenase; two-domain, beta-sandwich-d	95.81
3fr7_A	525	Putative ketol-acid reductoisomerase (OS05G057370	95.79
2d0i_A	333	Dehydrogenase; structural genomics, NPPSFA, nation	95.73
3mje_A	496	AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.	95.71
1kyq_A	274	Met8P, siroheme biosynthesis protein Met8; homodim	95.71
3qp9_A	525	Type I polyketide synthase pikaii; rossmann fold,	95.65
1qp8_A	303	Formate dehydrogenase; oxidoreductase; HET: NDP; 2	95.65
1ygy_A	529	PGDH, D-3-phosphoglycerate dehydrogenase; oxidored	95.64
4hy3_A	365	Phosphoglycerate oxidoreductase; PSI-biology, stru	95.63
2eez_A	369	Alanine dehydrogenase; TTHA0216, structural genomi	95.58
1j4a_A	333	D-LDH, D-lactate dehydrogenase; NAD-dependent dehy	95.56
3ijp_A	288	DHPR, dihydrodipicolinate reductase; ssgcid, SBRI,	95.54
2aef_A	234	Calcium-gated potassium channel MTHK; rossmann fol	95.51
1ff9_A	450	Saccharopine reductase; lysine biosynthesis, alpha	95.5
3jyo_A	283	Quinate/shikimate dehydrogenase; enzyme-cofactor c	95.5
3evt_A	324	Phosphoglycerate dehydrogenase; structural genomic	95.49
2pi1_A	334	D-lactate dehydrogenase; oxidoreductase, D-LDH, NA	95.49
2nac_A	393	NAD-dependent formate dehydrogenase; oxidoreductas	95.49
2dc1_A	236	L-aspartate dehydrogenase; NAD, oxidoreductase; HE	95.48
1zud_1	251	Adenylyltransferase THIF; thiamin, thiazole, prote	95.46
2vhw_A	377	Alanine dehydrogenase; NAD, secreted, oxidoreducta	95.44
3pzr_A	370	Aspartate-semialdehyde dehydrogenase; NADP, oxidor	95.39
1dih_A	273	Dihydrodipicolinate reductase; oxidoreductase; HET	95.36
3uw3_A	377	Aspartate-semialdehyde dehydrogenase; structural g	95.34
2ozp_A	345	N-acetyl-gamma-glutamyl-phosphate reductase; amino	95.34
1gdh_A	320	D-glycerate dehydrogenase; oxidoreductase(CHOH (D)	95.29
2rir_A	300	Dipicolinate synthase, A chain; structural genomic	95.28

>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*

Probab=100.00  E-value=3.7e-64  Score=478.67  Aligned_cols=308  Identities=54%  Similarity=0.844  Sum_probs=274.2

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhC-CCCcEEEEEecCC-chhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcCCC
Q 018512           43 FKVAILGAAGGIGQPLAMLMKIN-PLVSVLHLYDVVN-TPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGV  120 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~-~~~~ei~L~D~~~-~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~ag~  120 (354)
                      |||+||||+|+||+++++.|..+ ++..+|+|+|+++ ..|.++||+|......+..+.. ++.+++++|||+||+++|.
T Consensus         1 mKV~IiGAaG~VG~~~a~~L~~~~~~~~el~L~Di~~~~~G~a~Dl~~~~~~~~v~~~~~-~~~~~~~~~aDivii~ag~   79 (312)
T 3hhp_A            1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPVTPGVAVDLSHIPTAVKIKGFSG-EDATPALEGADVVLISAGV   79 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHSCTTEEEEEECSSTTHHHHHHHHHTSCSSEEEEEECS-SCCHHHHTTCSEEEECCSC
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCCceEEEEecCCCchhHHHHhhCCCCCceEEEecC-CCcHHHhCCCCEEEEeCCC
Confidence            79999997699999999999887 7778999999987 7799999999754334554322 2346899999999999999


Q ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCCchHHHHHHHHHhCCC-CCCCEEEeccchHHHHHHHH
Q 018512          121 PRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTY-DPKKLLGVTMLDVVRANTFV  199 (354)
Q Consensus       121 ~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~~~~~~~~~~-p~~kviG~t~ld~~r~~~~l  199 (354)
                      |+++||+|.|++.+|+++++++++.+.++||+++++++|||+|++|++++++ +|.+|+ |++||+|+|.||+.|+++++
T Consensus        80 ~rkpG~~R~dll~~N~~I~~~i~~~i~~~~p~a~vlvvtNPvd~~t~~a~~~-~k~sg~~p~~rv~G~~~LD~~R~~~~l  158 (312)
T 3hhp_A           80 ARKPGMDRSDLFNVNAGIVKNLVQQVAKTCPKACIGIITNPVNTTVAIAAEV-LKKAGVYDKNKLFGVTTLDIIRSNTFV  158 (312)
T ss_dssp             SCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTSEEEECSSCHHHHHHHHHHH-HHHTTCCCTTSEEECCHHHHHHHHHHH
T ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEecCcchhHHHHHHHH-HHHcCCCCcceEEEEechhHHHHHHHH
Confidence            9999999999999999999999999999999999999999999999986554 566777 99999999999999999999


Q ss_pred             HHHhCCCCCCCcceEEeec-CCccccccccccCCCCCCChHHHHHHHHHHhcchhHHHhhhccCCcchhhHHHHHHHHHH
Q 018512          200 AEVLGLDPRDVDVPVVGGH-AGVTILPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFAD  278 (354)
Q Consensus       200 a~~l~v~~~~v~~~v~G~h-g~~~~vp~~s~~~v~~~~~~~~~~~i~~~v~~~~~~i~~~~~~kg~~~~s~A~a~~~ii~  278 (354)
                      |+++|+++++|+++||||| |+ ++||+||++ -+.++++++|++|.+++++++++|++.|.|+|++.||+|.+++++++
T Consensus       159 a~~lgv~~~~v~~~V~G~Hsg~-t~vp~~S~~-~g~~~~~~~~~~i~~~v~~~g~eIi~~k~g~gst~~s~a~a~~~~~~  236 (312)
T 3hhp_A          159 AELKGKQPGEVEVPVIGGHSGV-TILPLLSQV-PGVSFTEQEVADLTKRIQNAGTEVVEAKAGGGSATLSMGQAAARFGL  236 (312)
T ss_dssp             HHHHTCCGGGCCCCEEECSSGG-GEEECGGGC-TTCCCCHHHHHHHHHHHHTHHHHHHHHTTTSCCCCHHHHHHHHHHHH
T ss_pred             HHHhCcChhHcceeEEeccCCC-ceeeecccC-CCCCCCHHHHHHHHHHHHhhhHHHHhhccCCCCchhHHHHHHHHHHH
Confidence            9999999999999999999 77 999999998 33468888999999999999999999766679999999999999999


Q ss_pred             HHHhccCCCCcEEEeeeeeccCCCccEEEEeEEEcCCCeEEeccCCCCCHHHHHHHHHHHHHHHHHHHHhhhhhcC
Q 018512          279 ACLRGLRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSIQKGISFSKK  354 (354)
Q Consensus       279 si~~~~~~~~~v~~~~~~~g~~~~~~~~svPv~ig~~Gv~~i~~~~~L~~~E~~~l~~sa~~i~~~~~~~~~~~~~  354 (354)
                      +|+...++++.++||++++|+.+.++|||+||++|++|+++++++++|+++|+++|++|++.|++.++++++|+++
T Consensus       237 ai~~~l~~~~~v~~~s~~~g~g~~~v~~s~P~~~g~~Gv~~v~~~~~L~~~E~~~l~~s~~~l~~~i~~g~~~~~~  312 (312)
T 3hhp_A          237 SLVRALQGEQGVVECAYVEGDGQYARFFSQPLLLGKNGVEERKSIGTLSAFEQNALEGMLDTLKKDIALGEEFVNK  312 (312)
T ss_dssp             HHHHHHTTCSSCEEEEEEECCCSSCSEEEEEEEEETTEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred             HHHHHcCCCCceEEEEEecCCCCcceEEEeEEEEeCCEEEEEcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhC
Confidence            9954433344588999888664458999999999999999999966999999999999999999999999999874

>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*

Probab=100.00  E-value=3.6e-63  Score=473.45  Aligned_cols=311  Identities=57%  Similarity=0.938  Sum_probs=286.1

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcCCCCC
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVPR  122 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~ag~~~  122 (354)
                      |||+||||+|+||++++..|+..++..+|+|+|+++.++.++||.|......++.+.+++|++++++|||+||+++|.|+
T Consensus         1 mKI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~~~~~a~dL~~~~~~~~l~~~~~t~d~~~a~~~aDvVvi~ag~~~   80 (314)
T 1mld_A            1 AKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVAADLSHIETRATVKGYLGPEQLPDCLKGCDVVVIPAGVPR   80 (314)
T ss_dssp             CEEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHHHHHHTTSSSSCEEEEEESGGGHHHHHTTCSEEEECCSCCC
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCccHHHHHHHhccCcCceEEEecCCCCHHHHhCCCCEEEECCCcCC
Confidence            69999998899999999999988877899999998878889999997654456654334578889999999999999999


Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCCchHHHHHHHHHhCCCCCCCEEEeccchHHHHHHHHHHH
Q 018512          123 KPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEV  202 (354)
Q Consensus       123 ~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~~~~~~~~~~p~~kviG~t~ld~~r~~~~la~~  202 (354)
                      ++|++|.|++.+|+++++++++.|++++|++|++++|||+|++++++++++++.++||++||+|+|.||+.|+++++|++
T Consensus        81 ~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~sNPv~~~~~i~~~~~~~~~~~p~~rvig~t~Ld~~r~~~~la~~  160 (314)
T 1mld_A           81 KPGMTRDDLFNTNATIVATLTAACAQHCPDAMICIISNPVNSTIPITAEVFKKHGVYNPNKIFGVTTLDIVRANAFVAEL  160 (314)
T ss_dssp             CTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECSSCHHHHHHHHHHHHHHTTCCCTTSEEECCHHHHHHHHHHHHHH
T ss_pred             CCCCcHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEECCCcchhHHHHHHHHHHcCCCCcceEEEeecccHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999998888999999999999999999999999999999


Q ss_pred             hCCCCCCCcceEEeec-CCccccccccccCCCCCCChHHHHHHHHHHhcchhHHHhhhccCCcchhhHHHHHHHHHHHHH
Q 018512          203 LGLDPRDVDVPVVGGH-AGVTILPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACL  281 (354)
Q Consensus       203 l~v~~~~v~~~v~G~h-g~~~~vp~~s~~~v~~~~~~~~~~~i~~~v~~~~~~i~~~~~~kg~~~~s~A~a~~~ii~si~  281 (354)
                      +|++|++|+++||||| |+ +++|+||.+.+...+++++++++.+++++++++|++.|.|+|++.|++|.++++++++|+
T Consensus       161 l~v~~~~v~~~v~G~H~G~-~~~p~~s~~~~~~~~~~~~~~~~~~~v~~~g~eii~~k~~~g~t~~~~a~a~~~~~~ai~  239 (314)
T 1mld_A          161 KGLDPARVSVPVIGGHAGK-TIIPLISQCTPKVDFPQDQLSTLTGRIQEAGTEVVKAKAGAGSATLSMAYAGARFVFSLV  239 (314)
T ss_dssp             TTCCGGGCBCCEEECSSGG-GEEECGGGCBSCCCCCHHHHHHHHHHHHHHHHHHHHHHTTSCSCCHHHHHHHHHHHHHHH
T ss_pred             hCcChHhEEEEEccCCCCC-cEeeecccCCCcccCCHHHHHHHHHHHHHHHHHHHhhhcCCCCcchhHHHHHHHHHHHHH
Confidence            9999999999999999 78 999999999854458888899999999999999999887889999999999999999999


Q ss_pred             hccCCCCcEEEeeeeeccCCCccEEEEeEEEcCCCeEEeccCCCCCHHHHHHHHHHHHHHHHHHHHhhhhhcC
Q 018512          282 RGLRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSIQKGISFSKK  354 (354)
Q Consensus       282 ~~~~~~~~v~~~~~~~g~~~~~~~~svPv~ig~~Gv~~i~~~~~L~~~E~~~l~~sa~~i~~~~~~~~~~~~~  354 (354)
                      +|+++++.++++++++|+|++++|||+||++|++|+++++++++|+++|+++|++|++.|++.++++++|++.
T Consensus       240 ~~~~g~~~v~~~~~~~g~y~~~~~~~~P~~ig~~Gv~~i~~l~~l~~~e~~~l~~s~~~l~~~~~~~~~~~~~  312 (314)
T 1mld_A          240 DAMNGKEGVVECSFVKSQETDCPYFSTPLLLGKKGIEKNLGIGKISPFEEKMIAEAIPELKASIKKGEEFVKN  312 (314)
T ss_dssp             HHHHTCTTCEEEEEEECCSSSSSEEEEEEEEETTEEEEECCCCSCCHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             cCcCCCcceEEEEEeCCccCCceEEEEEEEEeCCeeEEecCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            9976443588888889999889999999999999999998856999999999999999999999999998763

>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...

Probab=100.00  E-value=6.1e-63  Score=473.37  Aligned_cols=297  Identities=23%  Similarity=0.371  Sum_probs=264.5

Q ss_pred             CCCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCCCC-eEEEEeCCCcHHhhhCCCcEEE
Q 018512           39 GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGA-VVRGFLGQPQLENALTGMDLVI  115 (354)
Q Consensus        39 ~~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~~~-~v~~~~~~~d~~~al~~aDvVI  115 (354)
                      ..+.+||+|||| |.||+++++.|+.+++..+|+|+|+++  ++|.++||+|+...+ ..... .++|+ ++++|||+||
T Consensus        16 ~~~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~-~~~d~-~~~~~aDiVv   92 (331)
T 4aj2_A           16 QVPQNKITVVGV-GAVGMACAISILMKDLADELALVDVIEDKLKGEMMDLQHGSLFLKTPKIV-SSKDY-SVTANSKLVI   92 (331)
T ss_dssp             -CCSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCSCCEEE-ECSSG-GGGTTEEEEE
T ss_pred             cCCCCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEeCChHHHHHHHHhhhhhhhccCCCeEE-EcCCH-HHhCCCCEEE
Confidence            456689999999 999999999999999888999999987  689999999985222 21222 24575 6899999999


Q ss_pred             EcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCCchHHHHHHHHHhCCCCCCCEEEe-ccchHHH
Q 018512          116 IPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVR  194 (354)
Q Consensus       116 i~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~~~~~~~~~~p~~kviG~-t~ld~~r  194 (354)
                      +++|.|+++||+|.|++.+|+++++++++.|.++||++|++++|||+|++|++    +++.+++|++||||+ |.||+.|
T Consensus        93 i~aG~~~kpG~tR~dL~~~N~~I~~~i~~~i~~~~p~a~vlvvtNPvdi~t~~----~~k~sg~p~~rviG~gt~LD~~R  168 (331)
T 4aj2_A           93 ITAGARQQEGESRLNLVQRNVNIFKFIIPNVVKYSPQCKLLIVSNPVDILTYV----AWKISGFPKNRVIGSGCNLDSAR  168 (331)
T ss_dssp             ECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECSSSHHHHHHH----HHHHHCCCGGGEEECTTHHHHHH
T ss_pred             EccCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecChHHHHHHH----HHHHhCCCHHHEEeeccccHHHH
Confidence            99999999999999999999999999999999999999999999999999765    478889999999999 9999999


Q ss_pred             HHHHHHHHhCCCCCCCcceEEeecCCccccccccccCCCC------------CCChHHHHHHHHHHhcchhHHHhhhccC
Q 018512          195 ANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPC------------SFTQEETEYLTNRIQNGGTEVVEAKAGA  262 (354)
Q Consensus       195 ~~~~la~~l~v~~~~v~~~v~G~hg~~~~vp~~s~~~v~~------------~~~~~~~~~i~~~v~~~~~~i~~~~~~k  262 (354)
                      +++++|+++|+++++|+++||||||+ ++||+||++++.+            .+++++|++|.+++++++++|++.   |
T Consensus       169 ~~~~la~~lgv~~~~V~~~ViGeHG~-s~vp~~S~~~v~G~p~~~~~~~~~~~~~~~~~~~i~~~v~~~g~eIi~~---k  244 (331)
T 4aj2_A          169 FRYLMGERLGVHPLSCHGWVLGEHGD-SSVPVWSGVNVAGVSLKSLNPQLGTDADKEQWKDVHKQVVDSAYEVIKL---K  244 (331)
T ss_dssp             HHHHHHHHHTSCGGGCBCCEEBCSST-TCEECGGGCEETTEEHHHHCTTTTSTTCTTCTHHHHHHHHHHHHHHHHH---H
T ss_pred             HHHHHHHHhCCCHHHCEEeEEecCCC-ceeEeeecCeECCEEHHHHHhhccCCCCHHHHHHHHHHHHHhHHHHhhc---C
Confidence            99999999999999999999999999 9999999998632            235667999999999999999995   5


Q ss_pred             CcchhhHHHHHHHHHHHHHhccCCCCcEEEee-eeeccC--CCccEEEEeEEEcCCCeEEeccCCCCCHHHHHHHHHHHH
Q 018512          263 GSATLSMAYAAVKFADACLRGLRGDAGVVECA-FVASQV--TELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKK  339 (354)
Q Consensus       263 g~~~~s~A~a~~~ii~si~~~~~~~~~v~~~~-~~~g~~--~~~~~~svPv~ig~~Gv~~i~~~~~L~~~E~~~l~~sa~  339 (354)
                      |+++||+|.++++++++|++|.+   .++|++ +++|+|  ++++|||+||++|++|+++++++ +|+++|+++|++|++
T Consensus       245 g~t~~a~a~a~a~~~~ail~d~~---~~~~vs~~~~g~ygi~~~v~~s~P~~lg~~Gv~~iv~l-~L~~~E~~~l~~s~~  320 (331)
T 4aj2_A          245 GYTSWAIGLSVADLAESIMKNLR---RVHPISTMIKGLYGIKEDVFLSVPCILGQNGISDVVKV-TLTPDEEARLKKSAD  320 (331)
T ss_dssp             SSCCHHHHHHHHHHHHHHHTTCC---EEEEEEEECTTGGGCCSCCEEEEEEEEETTEEEEEECC-CCCHHHHHHHHHHHH
T ss_pred             CCCchhHHHHHHHHHHHHHhCCC---CeEEEEEecCCccCCcCceEEEEEEEEcCCeeEEEccC-CCCHHHHHHHHHHHH
Confidence            89999999999999999999975   488887 789998  57999999999999999999995 999999999999999


Q ss_pred             HHHHHHHHhhhh
Q 018512          340 ELAGSIQKGISF  351 (354)
Q Consensus       340 ~i~~~~~~~~~~  351 (354)
                      .|++ ++++++|
T Consensus       321 ~l~~-~~~~~~~  331 (331)
T 4aj2_A          321 TLWG-IQKELQF  331 (331)
T ss_dssp             HHHH-HHTTCCC
T ss_pred             HHHH-HHhhcCC
Confidence            9997 5555543

>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*

Probab=100.00  E-value=4.1e-62  Score=460.26  Aligned_cols=282  Identities=23%  Similarity=0.364  Sum_probs=254.7

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCC----CCeEEEEeCCCcHHhhhCCCcEEEE
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDT----GAVVRGFLGQPQLENALTGMDLVII  116 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~----~~~v~~~~~~~d~~~al~~aDvVIi  116 (354)
                      |||+|||| |+||+++++.|+.+++.+||+|+|+++  ++|+++||+|+..    .+.+..   ++|+ ++++|||+||+
T Consensus         1 MKV~IiGa-G~VG~~~a~~l~~~~~~~el~L~Di~~~~~~G~a~DL~h~~~~~~~~~~i~~---~~d~-~~~~~aDvVvi   75 (294)
T 2x0j_A            1 MKLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVG---GADY-SLLKGSEIIVV   75 (294)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHGGGTCCCEEEE---ESCG-GGGTTCSEEEE
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEeCCCCcchhhhhhhhcccccCCCCCeEec---CCCH-HHhCCCCEEEE
Confidence            89999998 999999999999999999999999987  7899999999642    233333   3464 78999999999


Q ss_pred             cCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCCchHHHHHHHHHhCCCCCCCEEEe-ccchHHHH
Q 018512          117 PAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRA  195 (354)
Q Consensus       117 ~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~~~~~~~~~~p~~kviG~-t~ld~~r~  195 (354)
                      +||.|+++||+|.|++..|+++++++++++.++||+++++++|||+|+++|++    ++.+|+|++|+||+ |.||++||
T Consensus        76 tAG~prkpGmtR~dLl~~Na~I~~~i~~~i~~~~p~aivlvvsNPvd~~t~i~----~k~sg~p~~rvig~gT~LDs~R~  151 (294)
T 2x0j_A           76 TAGLARKPGMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVTNPMDVMTYIM----WKESGKPRNEVFGMGNQLDSQRL  151 (294)
T ss_dssp             CCCCCCCSSSCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECSSSHHHHHHHH----HHHSSCCTTSEEECCHHHHHHHH
T ss_pred             ecCCCCCCCCchHHHHHHHHHHHHHHHHHHHhcCCceEEEEecCcchhhHHhh----HHHcCCChhhEEEeeeEEeHHHH
Confidence            99999999999999999999999999999999999999999999999998764    78899999999999 89999999


Q ss_pred             HHHHHHHhCCCCCCCcceEEeecCCccccccccccCCCCCCChHHHHHHHHHHhcchhHHHhhhccCCcchhhHHHHHHH
Q 018512          196 NTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVK  275 (354)
Q Consensus       196 ~~~la~~l~v~~~~v~~~v~G~hg~~~~vp~~s~~~v~~~~~~~~~~~i~~~v~~~~~~i~~~~~~kg~~~~s~A~a~~~  275 (354)
                      ++++++.+++++.  +++|||+||+ +++|+||.+.+...   .+++++.++++.++++|++.   ||++.||+|.++++
T Consensus       152 ~~~l~~~~~~~~~--~~~V~G~HGd-t~vp~~S~~~v~g~---~~~~~i~~~~~~~g~eIi~~---kGst~~a~a~a~~~  222 (294)
T 2x0j_A          152 KERLYNAGARNIR--RAWIIGEHGD-SMFVAKSLADFDGE---VDWEAVENDVRFVAAEVIKR---KGATIFGPAVAIYR  222 (294)
T ss_dssp             HHHHHHTTCEEEC--CCCEEBCSST-TCEECGGGCCEESC---CCHHHHHHHHHTHHHHHHHH---HSSCCHHHHHHHHH
T ss_pred             HHHHhhcccCCcc--eeEEEecCCC-cEEEeeeccCCCCc---hhHHHHHHHHhhhheEEEec---CcccchhHHHHHHH
Confidence            9999999987653  7899999999 99999999987432   24678888999999999994   58999999999999


Q ss_pred             HHHHHHhccCCCCcEEEee-eeeccC-CCccEEEEeEEEcCCCeEEeccCCCCCHHHHHHHHHHHHHHHHHHHH
Q 018512          276 FADACLRGLRGDAGVVECA-FVASQV-TELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSIQK  347 (354)
Q Consensus       276 ii~si~~~~~~~~~v~~~~-~~~g~~-~~~~~~svPv~ig~~Gv~~i~~~~~L~~~E~~~l~~sa~~i~~~~~~  347 (354)
                      ++++|++|++   .++|++ +++|+| .+++|||+||++|++|+ +++++ +|+++|+++|++|++.||+.+++
T Consensus       223 ~~~ail~d~~---~v~~~s~~l~g~yG~~~v~~s~P~~lg~~Gv-ei~~l-~L~~~E~~~l~~s~~~lk~~i~~  291 (294)
T 2x0j_A          223 MVKAVVEDTG---EIIPTSMILQGEYGIENVAVGVPAKLGKNGA-EVADI-KLSDEEIEKLRNSAKILRERLEE  291 (294)
T ss_dssp             HHHHHHTTCC---CEEEEEEEEESGGGCEEEEEEEEEEEETTEE-EECCC-CCCHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHcCCC---cEEEEEEEEecCCCCccEEEEEEEEEeCCEE-EEeCC-CCCHHHHHHHHHHHHHHHHHHHH
Confidence            9999999875   489997 679999 77999999999999998 58885 99999999999999999999875

>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A

Probab=100.00  E-value=1.5e-60  Score=457.61  Aligned_cols=310  Identities=90%  Similarity=1.351  Sum_probs=282.1

Q ss_pred             CCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcCC
Q 018512           40 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG  119 (354)
Q Consensus        40 ~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~ag  119 (354)
                      +++|||+||||+|+||++++..|+..++..+|+|+|+++..+.++||.+......+..+.+++|++++++|||+||+++|
T Consensus         6 ~~~mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~Di~~~~~~~~dL~~~~~~~~v~~~~~t~d~~~al~gaDvVi~~ag   85 (326)
T 1smk_A            6 APGFKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNAPGVTADISHMDTGAVVRGFLGQQQLEAALTGMDLIIVPAG   85 (326)
T ss_dssp             --CEEEEEETTTSTTHHHHHHHHHHCTTEEEEEEEESSSHHHHHHHHHTSCSSCEEEEEESHHHHHHHHTTCSEEEECCC
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHhCCCCCEEEEEeCCCcHhHHHHhhcccccceEEEEeCCCCHHHHcCCCCEEEEcCC
Confidence            45689999996699999999999988877799999998767788999986543355554344578899999999999999


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCCchHHHHHHHHHhCCCCCCCEEEeccchHHHHHHHH
Q 018512          120 VPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFV  199 (354)
Q Consensus       120 ~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~~~~~~~~~~p~~kviG~t~ld~~r~~~~l  199 (354)
                      .++++|++|.|++..|+++++++++++++++|++||+++|||+|++|+++++++++.++||++||||+|.||+.|+++++
T Consensus        86 ~~~~~g~~r~dl~~~N~~~~~~i~~~i~~~~p~~~viv~SNPv~~~~~~~t~~~~~~~~~p~~rviG~~~Ld~~r~~~~l  165 (326)
T 1smk_A           86 VPRKPGMTRDDLFKINAGIVKTLCEGIAKCCPRAIVNLISNPVNSTVPIAAEVFKKAGTYDPKRLLGVTMLDVVRANTFV  165 (326)
T ss_dssp             CCCCSSCCCSHHHHHHHHHHHHHHHHHHHHCTTSEEEECCSSHHHHHHHHHHHHHHHTCCCTTSEEECCHHHHHHHHHHH
T ss_pred             cCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEECCchHHHHHHHHHHHHHccCCCcccEEEEeehHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHhCCCCCCCcceEEeec-CCccccccccccCCCCCCChHHHHHHHHHHhcchhHHHhhhccCCcchhhHHHHHHHHHH
Q 018512          200 AEVLGLDPRDVDVPVVGGH-AGVTILPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFAD  278 (354)
Q Consensus       200 a~~l~v~~~~v~~~v~G~h-g~~~~vp~~s~~~v~~~~~~~~~~~i~~~v~~~~~~i~~~~~~kg~~~~s~A~a~~~ii~  278 (354)
                      |+++|++|++|+++|||+| |+ +++|+||.+.+...+++++++++.+++++++++|++.|.|+|++.||+|.+++++++
T Consensus       166 a~~l~v~~~~v~~~v~G~H~G~-~~~p~~s~~~v~~~~~~~~~~~~~~~v~~~g~eii~~k~~~gs~~~~~a~a~~~~~~  244 (326)
T 1smk_A          166 AEVLGLDPRDVDVPVVGGHAGV-TILPLLSQVKPPSSFTQEEISYLTDRIQNGGTEVVEAKAGAGSATLSMAYAAVKFAD  244 (326)
T ss_dssp             HHHHTCCGGGCBCCEEECSSGG-GEEECGGGCBSCCCCCHHHHHHHHHHHHHHHHHHHHHTTTSCCCCHHHHHHHHHHHH
T ss_pred             HHHhCcChhheEEEEecccCCc-eEEEecccCeecCcCCHHHHHHHHHHHHHHHHHHHhcccCCCCcHHHHHHHHHHHHH
Confidence            9999999999999999999 87 999999999886668888899999999999999999776779999999999999999


Q ss_pred             HH---HhccCCCCcEEEeeeeeccCCCccEEEEeEEEcCCCeEEeccCCCCCHHHHHHHHHHHHHHHHHHHHhhhhhc
Q 018512          279 AC---LRGLRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSIQKGISFSK  353 (354)
Q Consensus       279 si---~~~~~~~~~v~~~~~~~g~~~~~~~~svPv~ig~~Gv~~i~~~~~L~~~E~~~l~~sa~~i~~~~~~~~~~~~  353 (354)
                      +|   ++|++   .++++++++|+|++++|+|+||+||++|+++++++++|+++|+++|++|++.|++.++++.+|+.
T Consensus       245 ai~~~~~~~~---~v~~~~~~~g~~~~~~~~~vP~~ig~~Gv~~i~~~~~L~~~e~~~l~~s~~~l~~~~~~~~~~~~  319 (326)
T 1smk_A          245 ACLRGLRGDA---GVIECAFVSSQVTELPFFASKVRLGRNGIEEVYSLGPLNEYERIGLEKAKKELAGSIEKGVSFIR  319 (326)
T ss_dssp             HHHHHHHTCS---CEEEEEEEECCSSSSSEEEEEEEEETTEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred             HHHHHhCCCC---eEEEEEeeccccCCceEEEEEEEEeCCeeEEEcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99   87765   48889888898888999999999999999999984499999999999999999999999988864

>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}

Probab=100.00  E-value=4.7e-62  Score=464.62  Aligned_cols=295  Identities=26%  Similarity=0.466  Sum_probs=260.2

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCC----CCeEEEEeCCCcHHhhhCCCcEEEE
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDT----GAVVRGFLGQPQLENALTGMDLVII  116 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~----~~~v~~~~~~~d~~~al~~aDvVIi  116 (354)
                      |||+|||| |.||+++++.|+..++..+|+|+|+++  ++|.++||+|+..    ...+..   +++ +++++|||+||+
T Consensus         1 Mkv~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~~v~~---~~~-~~a~~~aDvVii   75 (314)
T 3nep_X            1 MKVTVIGA-GNVGATVAECVARQDVAKEVVMVDIKDGMPQGKALDMRESSPIHGFDTRVTG---TND-YGPTEDSDVCII   75 (314)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCSSEEEEECSSTTHHHHHHHHHHHHHHHHTCCCEEEE---ESS-SGGGTTCSEEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCchHHHHHHHHHHhccccccCCCcEEEE---CCC-HHHhCCCCEEEE
Confidence            79999998 999999999999999888999999988  6889999999642    223332   234 589999999999


Q ss_pred             cCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCCchHHHHHHHHHhCCCCCCCEEEec-cchHHHH
Q 018512          117 PAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVT-MLDVVRA  195 (354)
Q Consensus       117 ~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~~~~~~~~~~p~~kviG~t-~ld~~r~  195 (354)
                      ++|.|+++|++|.|++.+|+++++++++.+.++||++|++++|||+|++|+++    ++.+|||++||+|+| .||+.|+
T Consensus        76 ~ag~~~kpG~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vivvtNPvd~~t~~~----~k~~g~p~~rviG~~t~LD~~R~  151 (314)
T 3nep_X           76 TAGLPRSPGMSRDDLLAKNTEIVGGVTEQFVEGSPDSTIIVVANPLDVMTYVA----YEASGFPTNRVMGMAGVLDTGRF  151 (314)
T ss_dssp             CCCC-------CHHHHHHHHHHHHHHHHHHHTTCTTCEEEECCSSHHHHHHHH----HHHHTCCGGGEEECCHHHHHHHH
T ss_pred             CCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHHhCCCcEEEecCCchhHHHHHH----HHhcCCChHHEEeecCchHHHHH
Confidence            99999999999999999999999999999999999999999999999998765    677899999999995 9999999


Q ss_pred             HHHHHHHhCCCCCCCcceEEeecCCccccccccccCCCC-----CCChHHHHHHHHHHhcchhHHHhhhccCCcchhhHH
Q 018512          196 NTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPC-----SFTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMA  270 (354)
Q Consensus       196 ~~~la~~l~v~~~~v~~~v~G~hg~~~~vp~~s~~~v~~-----~~~~~~~~~i~~~v~~~~~~i~~~~~~kg~~~~s~A  270 (354)
                      ++++|+++|+++++|+++||||||+ ++||+||++++..     .++++++++|.+++++++++|+++| |+ ++.||+|
T Consensus       152 ~~~la~~lgv~~~~v~~~ViG~Hg~-t~vp~~S~~~v~g~p~~~~~~~~~~~~i~~~v~~~g~eIi~~k-g~-sa~~a~a  228 (314)
T 3nep_X          152 RSFIAEELDVSVRDVQALLMGGHGD-TMVPLPRYTTVGGIPVPQLIDDARIEEIVERTKGAGGEIVDLM-GT-SAWYAPG  228 (314)
T ss_dssp             HHHHHHHHTCCGGGEEEEEEESSGG-GEEEEEEEEEETTEEGGGTSCHHHHHHHHHHHHTHHHHHHHHH-SS-CCCHHHH
T ss_pred             HHHHHHHhCcCHHHeEEEEECCCCC-cEEeeeecCeECcEehhhccCHHHHHHHHHHHHHhHHHHHhcc-CC-cHHHHHH
Confidence            9999999999999999999999999 9999999998743     2466778999999999999999976 44 8999999


Q ss_pred             HHHHHHHHHHHhccCCCCcEEEee-eeeccC-CCccEEEEeEEEcCCCeEEeccCCCCCHHHHHHHHHHHHHHHHHHHHh
Q 018512          271 YAAVKFADACLRGLRGDAGVVECA-FVASQV-TELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSIQKG  348 (354)
Q Consensus       271 ~a~~~ii~si~~~~~~~~~v~~~~-~~~g~~-~~~~~~svPv~ig~~Gv~~i~~~~~L~~~E~~~l~~sa~~i~~~~~~~  348 (354)
                      .++++++++|++|.+   .++||+ +++|+| .+++|||+||++|++|+++++++ +|+++|+++|++|++.|++.++..
T Consensus       229 ~a~~~~~~ail~~~~---~v~~~s~~~~g~yg~~~~~~s~P~~lg~~Gv~~v~~l-~L~~~E~~~l~~s~~~l~~~~~~~  304 (314)
T 3nep_X          229 AAAAEMTEAILKDNK---RILPCAAYCDGEYGLDDLFIGVPVKLGAGGVEEVIEV-DLDADEKAQLKTSAGHVHSNLDDL  304 (314)
T ss_dssp             HHHHHHHHHHHHTCC---EEEEEEEEEESGGGCEEEEEEEEEEEETTEEEEECCC-CCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHcCCC---eEEEEEEEeccccCCCceEEEEEEEEeCCEEEEecCC-CCCHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999864   589997 789999 67999999999999999999996 999999999999999999999988


Q ss_pred             hhhhc
Q 018512          349 ISFSK  353 (354)
Q Consensus       349 ~~~~~  353 (354)
                      .++++
T Consensus       305 ~~~l~  309 (314)
T 3nep_X          305 QRLRD  309 (314)
T ss_dssp             HHHHH
T ss_pred             HHHHh
Confidence            76654

>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}

Probab=100.00  E-value=1.2e-60  Score=456.62  Aligned_cols=297  Identities=32%  Similarity=0.497  Sum_probs=268.3

Q ss_pred             CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCC----CCeEEEEeCCCcHHhhhCCCcEE
Q 018512           41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDT----GAVVRGFLGQPQLENALTGMDLV  114 (354)
Q Consensus        41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~----~~~v~~~~~~~d~~~al~~aDvV  114 (354)
                      +.+||+|||+ |.+|+++++.|+..++. +|+|+|+++  +++.++||+|...    ...+..   ++| +++++|||+|
T Consensus         4 ~~~kI~iiGa-G~vG~~~a~~l~~~~~~-~v~l~Di~~~~~~g~a~dL~~~~~~~~~~~~v~~---t~d-~~a~~~aDvV   77 (321)
T 3p7m_A            4 ARKKITLVGA-GNIGGTLAHLALIKQLG-DVVLFDIAQGMPNGKALDLLQTCPIEGVDFKVRG---TND-YKDLENSDVV   77 (321)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCC-EEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEE---ESC-GGGGTTCSEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCc-eEEEEeCChHHHHHHHHHHHhhhhhcCCCcEEEE---cCC-HHHHCCCCEE
Confidence            3579999998 99999999999999987 999999988  5788999999742    233443   245 4899999999


Q ss_pred             EEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCCchHHHHHHHHHhCCCCCCCEEEec-cchHH
Q 018512          115 IIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVT-MLDVV  193 (354)
Q Consensus       115 Ii~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~~~~~~~~~~p~~kviG~t-~ld~~  193 (354)
                      |+++|.|+++|++|.|++.+|+++++++++.|.++||+++++++|||+|++|++    +++.+++|++||+|+| .||+.
T Consensus        78 Ii~ag~p~k~G~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vivvtNPvd~~t~~----~~k~sg~p~~rviG~~~~LD~~  153 (321)
T 3p7m_A           78 IVTAGVPRKPGMSRDDLLGINIKVMQTVGEGIKHNCPNAFVICITNPLDIMVNM----LQKFSGVPDNKIVGMAGVLDSA  153 (321)
T ss_dssp             EECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCSSHHHHHHH----HHHHHCCCGGGEEEECHHHHHH
T ss_pred             EEcCCcCCCCCCCHHHHHHHhHHHHHHHHHHHHHHCCCcEEEEecCchHHHHHH----HHHhcCCCHHHEEeeccchHHH
Confidence            999999999999999999999999999999999999999999999999999865    4788899999999996 99999


Q ss_pred             HHHHHHHHHhCCCCCCCcceEEeecCCccccccccccCCCC----------CCChHHHHHHHHHHhcchhHHHhhhccCC
Q 018512          194 RANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPC----------SFTQEETEYLTNRIQNGGTEVVEAKAGAG  263 (354)
Q Consensus       194 r~~~~la~~l~v~~~~v~~~v~G~hg~~~~vp~~s~~~v~~----------~~~~~~~~~i~~~v~~~~~~i~~~~~~kg  263 (354)
                      |+++++|+++|+++++|+++|||+||+ +++|+||++++.+          .+++++++++.+++++++++|++++ |+|
T Consensus       154 R~~~~la~~l~v~~~~v~~~v~G~HG~-t~~p~~s~~~v~g~p~~~~~~~~~~~~~~~~~i~~~v~~~g~eIi~~~-g~g  231 (321)
T 3p7m_A          154 RFRTFLADELNVSVQQVQAYVMGGHGD-TMVPLTKMSNVAGVSLEQLVKEGKLKQERLDAIVSRTRSGGGEIVALL-KTG  231 (321)
T ss_dssp             HHHHHHHHHHTCCGGGEECCEEECSGG-GEEECTTTCEETTEEHHHHHHTTSSCHHHHHHHHHHHHTHHHHHHHHH-SSS
T ss_pred             HHHHHHHHHhCcCHHHceEeeecCcCC-ceeeeeeeceECCEehhhhccccCCCHHHHHHHHHHHHhhhHHHHHhc-CCC
Confidence            999999999999999999999999999 9999999998742          1467788999999999999999987 789


Q ss_pred             cchhhHHHHHHHHHHHHHhccCCCCcEEEee-eee-ccC--CCccEEEEeEEEcCCCeEEeccCCCCCHHHHHHHHHHHH
Q 018512          264 SATLSMAYAAVKFADACLRGLRGDAGVVECA-FVA-SQV--TELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKK  339 (354)
Q Consensus       264 ~~~~s~A~a~~~ii~si~~~~~~~~~v~~~~-~~~-g~~--~~~~~~svPv~ig~~Gv~~i~~~~~L~~~E~~~l~~sa~  339 (354)
                      ++.||+|.++++++++|++|++   .++||+ +++ |+|  ++++|||+||++|++|++++ ++ +|+++|+++|++|++
T Consensus       232 sa~~~~a~a~~~~~~ail~~~~---~v~~~s~~~~~g~ygi~~~v~~s~P~~~g~~Gv~~v-~l-~L~~~E~~~l~~s~~  306 (321)
T 3p7m_A          232 SAYYAPAAAGIQMAESFLKDKK---MILPCAAKVKAGMYGLDEDLFVGVPTEISANGVRPI-EV-EISDKEREQLQVSIN  306 (321)
T ss_dssp             CCCHHHHHHHHHHHHHHHTTCC---EEEEEEEEECTTGGGCSSCEEEEEEEEEETTEEEEC-CC-CCCHHHHHHHHHHHH
T ss_pred             ChHHHHHHHHHHHHHHHHcCCC---cEEEEEEEccCcccCCCCCeEEEEEEEEcCCEEEEe-CC-CCCHHHHHHHHHHHH
Confidence            9999999999999999999865   599998 678 898  55999999999999999999 85 999999999999999


Q ss_pred             HHHHHHHHhhhhhcC
Q 018512          340 ELAGSIQKGISFSKK  354 (354)
Q Consensus       340 ~i~~~~~~~~~~~~~  354 (354)
                      .|++.++...+++++
T Consensus       307 ~l~~~~~~~~~~l~~  321 (321)
T 3p7m_A          307 AIKDLNKAAAEILAK  321 (321)
T ss_dssp             HHHHHHHHHHHHHC-
T ss_pred             HHHHHHHHHHHHhhC
Confidence            999999988777654

>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*

Probab=100.00  E-value=4.9e-62  Score=466.19  Aligned_cols=295  Identities=22%  Similarity=0.368  Sum_probs=245.7

Q ss_pred             CCCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCCC-CeEEEEeCCCcHHhhhCCCcEEE
Q 018512           39 GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTG-AVVRGFLGQPQLENALTGMDLVI  115 (354)
Q Consensus        39 ~~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~~-~~v~~~~~~~d~~~al~~aDvVI  115 (354)
                      +..++||+|||| |+||+++++.|+..+++.+|+|+|+++  ++|.++||+|.... ..++..  +++ +++++|||+||
T Consensus         6 ~~~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~i~--~~~-~~a~~~aDiVv   81 (326)
T 3vku_A            6 DKDHQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLEDALPFTSPKKIY--SAE-YSDAKDADLVV   81 (326)
T ss_dssp             -CCCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEE--ECC-GGGGTTCSEEE
T ss_pred             cCCCCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHhhHhhhhhhcCCcEEE--ECc-HHHhcCCCEEE
Confidence            345679999998 999999999999999988999999987  68899999997531 234443  234 58899999999


Q ss_pred             EcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCCchHHHHHHHHHhCCCCCCCEEEe-ccchHHH
Q 018512          116 IPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVR  194 (354)
Q Consensus       116 i~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~~~~~~~~~~p~~kviG~-t~ld~~r  194 (354)
                      +++|.|+++||+|.|++.+|+++++++++.|.++||++|++++|||+|++|++    +++.++||++||||+ |.||+.|
T Consensus        82 i~ag~~~kpG~tR~dL~~~N~~I~~~i~~~i~~~~p~a~ilvvtNPvdi~t~~----~~k~~g~p~~rviG~gt~LD~~R  157 (326)
T 3vku_A           82 ITAGAPQKPGETRLDLVNKNLKILKSIVDPIVDSGFNGIFLVAANPVDILTYA----TWKLSGFPKNRVVGSGTSLDTAR  157 (326)
T ss_dssp             ECCCCC----------------CHHHHHHHHHTTTCCSEEEECSSSHHHHHHH----HHHHHCCCGGGEEECTTHHHHHH
T ss_pred             ECCCCCCCCCchHHHHHHHHHHHHHHHHHHHHhcCCceEEEEccCchHHHHHH----HHHhcCCCHHHeeeecccCcHHH
Confidence            99999999999999999999999999999999999999999999999999765    478889999999999 9999999


Q ss_pred             HHHHHHHHhCCCCCCCcceEEeecCCccccccccccCCCC-C----------CChHHHHHHHHHHhcchhHHHhhhccCC
Q 018512          195 ANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPC-S----------FTQEETEYLTNRIQNGGTEVVEAKAGAG  263 (354)
Q Consensus       195 ~~~~la~~l~v~~~~v~~~v~G~hg~~~~vp~~s~~~v~~-~----------~~~~~~~~i~~~v~~~~~~i~~~~~~kg  263 (354)
                      +++++|+++|+++++|+++||||||+ ++||+||++++.+ +          ++++++++|.+++++++++|++.   ||
T Consensus       158 ~~~~la~~lgv~~~~V~~~ViGeHGd-t~vp~~S~a~v~g~pl~~~~~~~~~~~~~~~~~i~~~v~~~g~eIi~~---kG  233 (326)
T 3vku_A          158 FRQSIAKMVNVDARSVHAYIMGEHGD-TEFPVWSHANIGGVTIAEWVKAHPEIKEDKLVKMFEDVRNKAYEIIKL---KG  233 (326)
T ss_dssp             HHHHHHHHHTSCGGGEECCEEBSSST-TCEECGGGCEETTEEHHHHHHHCTTSCHHHHHHHHHHHHHHHHHHHHH---HS
T ss_pred             HHHHHHHHhCCCHHHCeEEEEcCCCC-eeEEeeeccccCCEEHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhc---CC
Confidence            99999999999999999999999999 9999999998753 1          14567899999999999999994   58


Q ss_pred             cchhhHHHHHHHHHHHHHhccCCCCcEEEee-eeeccC-CCccEEEEeEEEcCCCeEEeccCCCCCHHHHHHHHHHHHHH
Q 018512          264 SATLSMAYAAVKFADACLRGLRGDAGVVECA-FVASQV-TELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKEL  341 (354)
Q Consensus       264 ~~~~s~A~a~~~ii~si~~~~~~~~~v~~~~-~~~g~~-~~~~~~svPv~ig~~Gv~~i~~~~~L~~~E~~~l~~sa~~i  341 (354)
                      +++||+|.++++++++|++|.+   .++|++ +++|+| .+++|||+||++|++|+++++++ +|+++|+++|++|++.|
T Consensus       234 ~t~~a~a~a~~~~~~ail~~~~---~v~~~s~~~~g~yg~~~v~~s~P~~lg~~Gv~~iv~l-~L~~~E~~~l~~sa~~L  309 (326)
T 3vku_A          234 ATFYGIATALARISKAILNDEN---AVLPLSVYMDGQYGLNDIYIGTPAVINRNGIQNILEI-PLTDHEEESMQKSASQL  309 (326)
T ss_dssp             CCCHHHHHHHHHHHHHHHTTCC---EEEEEEEEEEEGGGEEEEEEEEEEEEETTEEEEECCC-CCCHHHHHHHHHHHHHH
T ss_pred             CchHHHHHHHHHHHHHHhcCCC---ceEEEEeeccCccCCCceEEEEEEEEcCCceEEEecC-CCCHHHHHHHHHHHHHH
Confidence            9999999999999999999854   589986 789999 56999999999999999999995 99999999999999999


Q ss_pred             HHHHHHhh
Q 018512          342 AGSIQKGI  349 (354)
Q Consensus       342 ~~~~~~~~  349 (354)
                      ++.++...
T Consensus       310 ~~~~~~~~  317 (326)
T 3vku_A          310 KKVLTDAF  317 (326)
T ss_dssp             HCC-----
T ss_pred             HHHHHHHH
Confidence            99887763

>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*

Probab=100.00  E-value=8.8e-61  Score=452.13  Aligned_cols=282  Identities=23%  Similarity=0.358  Sum_probs=256.9

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCC--C--CCeEEEEeCCCcHHhhhCCCcEEEE
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMD--T--GAVVRGFLGQPQLENALTGMDLVII  116 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~--~--~~~v~~~~~~~d~~~al~~aDvVIi  116 (354)
                      |||+|||| |.+|+++++.|+..++.++|+|+|+++  +++.++|+.|..  .  ...+..   ++| +++++|||+||+
T Consensus         1 MkI~ViGa-G~vG~~la~~l~~~~~~~~v~L~D~~~~~~~g~~~dl~~~~~~~~~~~~i~~---t~d-~~a~~~aDiVVi   75 (294)
T 1oju_A            1 MKLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVG---GAD-YSLLKGSEIIVV   75 (294)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEE---ESC-GGGGTTCSEEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECChHHHHHHHHHHHhhhhhcCCCCEEEE---eCC-HHHhCCCCEEEE
Confidence            79999999 999999999999999888999999987  577889998864  2  223443   346 689999999999


Q ss_pred             cCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCCchHHHHHHHHHhCCCCCCCEEEe-ccchHHHH
Q 018512          117 PAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRA  195 (354)
Q Consensus       117 ~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~~~~~~~~~~p~~kviG~-t~ld~~r~  195 (354)
                      ++|.|+++|++|.|++.+|+++++++++.|.++||+++++++|||+|++|++    +++.++||++||||+ |.||+.|+
T Consensus        76 aag~~~kpG~~R~dl~~~N~~i~~~i~~~i~~~~p~a~iivvsNPvd~~t~~----~~k~~g~p~~rviG~gt~LD~~R~  151 (294)
T 1oju_A           76 TAGLARKPGMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVTNPMDVMTYI----MWKESGKPRNEVFGMGNQLDSQRL  151 (294)
T ss_dssp             CCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECSSSHHHHHHH----HHHHSCCCTTSEEECSHHHHHHHH
T ss_pred             CCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEeCCcchHHHHH----HHHhcCCCHHHEeecccccHHHHH
Confidence            9999999999999999999999999999999999999999999999999765    478899999999999 89999999


Q ss_pred             HHHHHHHhCCCCCCCcceEEeecCCccccccccccCCCCCCChHHHHHHHHHHhcchhHHHhhhccCCcchhhHHHHHHH
Q 018512          196 NTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVK  275 (354)
Q Consensus       196 ~~~la~~l~v~~~~v~~~v~G~hg~~~~vp~~s~~~v~~~~~~~~~~~i~~~v~~~~~~i~~~~~~kg~~~~s~A~a~~~  275 (354)
                      ++++| ++|++|++ +++||||||+ ++||+||++++.. .+  ++++|.+++++++++|++.   ||+++||+|.++++
T Consensus       152 ~~~la-~l~v~~~~-~~~V~G~Hg~-t~vp~~s~~~v~g-~~--~~~~~~~~v~~~g~eii~~---kG~t~~~~a~a~~~  222 (294)
T 1oju_A          152 KERLY-NAGARNIR-RAWIIGEHGD-SMFVAKSLADFDG-EV--DWEAVENDVRFVAAEVIKR---KGATIFGPAVAIYR  222 (294)
T ss_dssp             HHHHH-HTTCBSCC-CCCEEBCSST-TCEECGGGCCCBS-CC--CHHHHHHHHHTTHHHHHHH---HSSCCHHHHHHHHH
T ss_pred             HHHHH-HhCCCccC-ceEEEecCCC-ceeeecccceECC-cC--hHHHHHHHHHHHHHHHHHh---cCCcchHHHHHHHH
Confidence            99999 99999999 9999999999 9999999999843 22  6889999999999999995   58999999999999


Q ss_pred             HHHHHHhccCCCCcEEEee-eeeccC-CCccEEEEeEEEcCCCeEEeccCCCCCHHHHHHHHHHHHHHHHHHHH
Q 018512          276 FADACLRGLRGDAGVVECA-FVASQV-TELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSIQK  347 (354)
Q Consensus       276 ii~si~~~~~~~~~v~~~~-~~~g~~-~~~~~~svPv~ig~~Gv~~i~~~~~L~~~E~~~l~~sa~~i~~~~~~  347 (354)
                      ++++|++|.+   .++||+ +++|+| .+++|||+||++|++|++ +.++ +|+++|+++|++|++.|++.++.
T Consensus       223 ~~~ail~~~~---~v~~~s~~~~g~yg~~~~~~s~P~~~g~~Gv~-v~~l-~L~~~E~~~l~~s~~~l~~~~~~  291 (294)
T 1oju_A          223 MVKAVVEDTG---EIIPTSMILQGEYGIENVAVGVPAKLGKNGAE-VADI-KLSDEEIEKLRNSAKILRERLEE  291 (294)
T ss_dssp             HHHHHHTTCC---CEEEEEEEEESGGGCEEEEEEEEEEEETTEEE-ECCC-CCCHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHcCCC---eEEEEEecccccCCCCceEEEEEEEEeCCEEE-EecC-CCCHHHHHHHHHHHHHHHHHHHh
Confidence            9999999864   499998 789999 569999999999999999 9885 99999999999999999999875

>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*

Probab=100.00  E-value=1.1e-60  Score=456.93  Aligned_cols=297  Identities=31%  Similarity=0.494  Sum_probs=262.1

Q ss_pred             CCCCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCC----CCeEEEEeCCCcHHhhhCCC
Q 018512           38 GGAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDT----GAVVRGFLGQPQLENALTGM  111 (354)
Q Consensus        38 ~~~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~----~~~v~~~~~~~d~~~al~~a  111 (354)
                      +..+.+||+|||| |.+|+++++.|+..++. +|+|+|+++  +++.++||.|...    ...+..   ++|+ ++++||
T Consensus         3 ~~m~~~kI~viGa-G~vG~~~a~~l~~~~~~-~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~---t~d~-~a~~~a   76 (324)
T 3gvi_A            3 GSMARNKIALIGS-GMIGGTLAHLAGLKELG-DVVLFDIAEGTPQGKGLDIAESSPVDGFDAKFTG---ANDY-AAIEGA   76 (324)
T ss_dssp             ---CCCEEEEECC-SHHHHHHHHHHHHTTCC-EEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEE---ESSG-GGGTTC
T ss_pred             CCCcCCEEEEECC-CHHHHHHHHHHHhCCCC-eEEEEeCCchhHHHHHHHHhchhhhcCCCCEEEE---eCCH-HHHCCC
Confidence            3456689999999 99999999999999986 999999988  5788899998642    233443   3465 899999


Q ss_pred             cEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCCchHHHHHHHHHhCCCCCCCEEEec-cc
Q 018512          112 DLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVT-ML  190 (354)
Q Consensus       112 DvVIi~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~~~~~~~~~~p~~kviG~t-~l  190 (354)
                      |+||+++|.|+++|++|.|++.+|++++++++++|.++||++|++++|||+|++|+++    ++.+++|++||+|+| .|
T Consensus        77 DiVIiaag~p~k~G~~R~dl~~~N~~i~~~i~~~i~~~~p~a~iivvtNPvd~~t~~~----~k~sg~p~~rviG~~~~L  152 (324)
T 3gvi_A           77 DVVIVTAGVPRKPGMSRDDLLGINLKVMEQVGAGIKKYAPEAFVICITNPLDAMVWAL----QKFSGLPAHKVVGMAGVL  152 (324)
T ss_dssp             SEEEECCSCCCC-----CHHHHHHHHHHHHHHHHHHHHCTTCEEEECCSSHHHHHHHH----HHHHCCCGGGEEECCHHH
T ss_pred             CEEEEccCcCCCCCCCHHHHHHhhHHHHHHHHHHHHHHCCCeEEEecCCCcHHHHHHH----HHhcCCCHHHEEeecCcc
Confidence            9999999999999999999999999999999999999999999999999999998754    788899999999996 89


Q ss_pred             hHHHHHHHHHHHhCCCCCCCcceEEeecCCccccccccccCCCC----------CCChHHHHHHHHHHhcchhHHHhhhc
Q 018512          191 DVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPC----------SFTQEETEYLTNRIQNGGTEVVEAKA  260 (354)
Q Consensus       191 d~~r~~~~la~~l~v~~~~v~~~v~G~hg~~~~vp~~s~~~v~~----------~~~~~~~~~i~~~v~~~~~~i~~~~~  260 (354)
                      |+.|+++++|+++|+++++|+++|||+||+ +++|+||++++..          .+++++++++.+++++++++|++++ 
T Consensus       153 D~~R~~~~la~~lgv~~~~v~~~v~G~HG~-t~~p~~s~~~v~g~p~~~~~~~~~~~~~~~~~i~~~v~~~g~eIi~~~-  230 (324)
T 3gvi_A          153 DSARFRYFLSEEFNVSVEDVTVFVLGGHGD-SMVPLARYSTVAGIPLPDLVKMGWTSQDKLDKIIQRTRDGGAEIVGLL-  230 (324)
T ss_dssp             HHHHHHHHHHHHHTCCGGGEECCEEECSGG-GEEECGGGCEETTEEHHHHHHTTSSCHHHHHHHHHHHHTHHHHHHHHH-
T ss_pred             HHHHHHHHHHHHhCcCHHHCeEEEEcCCCC-ceeeehhhCeECCEEHHHhhhccCCCHHHHHHHHHHHHHhHHHHHHhc-
Confidence            999999999999999999999999999999 9999999998742          1467788999999999999999987 


Q ss_pred             cCCcchhhHHHHHHHHHHHHHhccCCCCcEEEee-eeeccC-CCccEEEEeEEEcCCCeEEeccCCCCCHHHHHHHHHHH
Q 018512          261 GAGSATLSMAYAAVKFADACLRGLRGDAGVVECA-FVASQV-TELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAK  338 (354)
Q Consensus       261 ~kg~~~~s~A~a~~~ii~si~~~~~~~~~v~~~~-~~~g~~-~~~~~~svPv~ig~~Gv~~i~~~~~L~~~E~~~l~~sa  338 (354)
                      |||++.||+|.++++++++|++|++   .++||+ +++|+| .+++|||+||++|++|+++++++ +|+++|+++|++|+
T Consensus       231 gkgsa~~~~a~a~~~~~~ail~~~~---~v~~~s~~~~g~yg~~~v~~s~P~~~g~~Gv~~v~~l-~L~~~E~~~l~~s~  306 (324)
T 3gvi_A          231 KTGSAFYAPAASAIQMAESYLKDKK---RVLPVAAQLSGQYGVKDMYVGVPTVIGANGVERIIEI-DLDKDEKAQFDKSV  306 (324)
T ss_dssp             SSCCCCHHHHHHHHHHHHHHHTTCC---EEEEEEEEEESGGGCEEEEEEEEEEEETTEEEEECCC-CCCHHHHHHHHHHH
T ss_pred             CCCcHHHHHHHHHHHHHHHHHcCCC---cEEEEEEEecCccCCCceEEEEEEEEeCCEEEEecCC-CCCHHHHHHHHHHH
Confidence            8899999999999999999999875   599998 789999 56999999999999999999996 99999999999999


Q ss_pred             HHHHHHHHHhhh
Q 018512          339 KELAGSIQKGIS  350 (354)
Q Consensus       339 ~~i~~~~~~~~~  350 (354)
                      +.|++.++....
T Consensus       307 ~~l~~~~~~~~~  318 (324)
T 3gvi_A          307 ASVAGLCEACIG  318 (324)
T ss_dssp             HHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhh
Confidence            999999987654

>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*

Probab=100.00  E-value=4.2e-61  Score=460.27  Aligned_cols=292  Identities=23%  Similarity=0.318  Sum_probs=263.7

Q ss_pred             CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCCC--CeEEEEeCCCcHHhhhCCCcEEEE
Q 018512           41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTG--AVVRGFLGQPQLENALTGMDLVII  116 (354)
Q Consensus        41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~~--~~v~~~~~~~d~~~al~~aDvVIi  116 (354)
                      +++||+|||+ |.||+++++.|+..++..+|+|+|+++  +++.++||+|....  ..++.+  +++ +++++|||+||+
T Consensus         4 ~~~kI~ViGa-G~vG~~~a~~l~~~~~~~~l~l~D~~~~k~~g~a~DL~~~~~~~~~~v~i~--~~~-~~a~~~aDvVvi   79 (326)
T 3pqe_A            4 HVNKVALIGA-GFVGSSYAFALINQGITDELVVIDVNKEKAMGDVMDLNHGKAFAPQPVKTS--YGT-YEDCKDADIVCI   79 (326)
T ss_dssp             SCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHTGGGSSSCCEEE--EEC-GGGGTTCSEEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHHHHHhccccccCCeEEE--eCc-HHHhCCCCEEEE
Confidence            4679999998 999999999999999888999999987  68899999997321  234443  234 478999999999


Q ss_pred             cCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCCchHHHHHHHHHhCCCCCCCEEEe-ccchHHHH
Q 018512          117 PAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRA  195 (354)
Q Consensus       117 ~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~~~~~~~~~~p~~kviG~-t~ld~~r~  195 (354)
                      ++|.|+++|++|.|++..|+++++++++.+.++||++|++++|||+|++|++    +++.++||++||||+ |.||+.|+
T Consensus        80 ~ag~p~kpG~~R~dL~~~N~~Iv~~i~~~I~~~~p~a~vlvvtNPvd~~t~~----~~k~~g~p~~rviG~gt~LD~~R~  155 (326)
T 3pqe_A           80 CAGANQKPGETRLELVEKNLKIFKGIVSEVMASGFDGIFLVATNPVDILTYA----TWKFSGLPKERVIGSGTTLDSARF  155 (326)
T ss_dssp             CCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHTTCCSEEEECSSSHHHHHHH----HHHHHCCCGGGEEECTTHHHHHHH
T ss_pred             ecccCCCCCccHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEcCChHHHHHHH----HHHhcCCCHHHEEeeccccHHHHH
Confidence            9999999999999999999999999999999999999999999999999765    477889999999999 99999999


Q ss_pred             HHHHHHHhCCCCCCCcceEEeecCCccccccccccCCCC-C----------CChHHHHHHHHHHhcchhHHHhhhccCCc
Q 018512          196 NTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPC-S----------FTQEETEYLTNRIQNGGTEVVEAKAGAGS  264 (354)
Q Consensus       196 ~~~la~~l~v~~~~v~~~v~G~hg~~~~vp~~s~~~v~~-~----------~~~~~~~~i~~~v~~~~~~i~~~~~~kg~  264 (354)
                      ++++|+++|+++++|+++||||||+ ++||+||++++.+ +          ++++++++|.+++++++++|++.   ||+
T Consensus       156 ~~~la~~lgv~~~~V~~~V~GeHG~-t~vp~~S~~~v~g~p~~~~~~~~~~~~~~~~~~i~~~v~~~g~eIi~~---kG~  231 (326)
T 3pqe_A          156 RFMLSEYFGAAPQNVCAHIIGEHGD-TELPVWSHANVGGVPVSELVEKNDAYKQEELDQIVDDVKNAAYHIIEK---KGA  231 (326)
T ss_dssp             HHHHHHHHTCCGGGEECCEEBSSST-TCEECGGGCEETTEEHHHHHHTCTTSCHHHHHHHHHHHHHHHHHHHHH---HSC
T ss_pred             HHHHHHHhCCCHHHceeeeeecCCC-ceeeeeeeeeECCEEHHHHhhcccCCCHHHHHHHHHHHHhhhheeeeC---CCC
Confidence            9999999999999999999999999 9999999998743 1          25667899999999999999994   589


Q ss_pred             chhhHHHHHHHHHHHHHhccCCCCcEEEee-eeeccC-CCccEEEEeEEEcCCCeEEeccCCCCCHHHHHHHHHHHHHHH
Q 018512          265 ATLSMAYAAVKFADACLRGLRGDAGVVECA-FVASQV-TELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELA  342 (354)
Q Consensus       265 ~~~s~A~a~~~ii~si~~~~~~~~~v~~~~-~~~g~~-~~~~~~svPv~ig~~Gv~~i~~~~~L~~~E~~~l~~sa~~i~  342 (354)
                      ++||+|.++++++++|++|.+   .++|++ +++|+| .+++|||+||++|++|+++++++ +|+++|+++|++|++.|+
T Consensus       232 t~~a~a~a~~~~~~ail~~~~---~v~~~s~~~~g~yg~~~v~~s~P~~lg~~Gv~~iv~l-~L~~~E~~~l~~s~~~l~  307 (326)
T 3pqe_A          232 TYYGVAMSLARITKAILHNEN---SILTVSTYLDGQYGADDVYIGVPAVVNRGGIAGITEL-NLNEKEKEQFLHSAGVLK  307 (326)
T ss_dssp             CCHHHHHHHHHHHHHHHTTCC---EEECCEEEEESGGGCEEEEEECCEEEETTEEEEECCC-CCCHHHHHHHHHHHHHHH
T ss_pred             cHHHHHHHHHHHHHHHhcCCC---cEEEEEEeeccccCCCceEEEEEEEEcCCceEEEecC-CCCHHHHHHHHHHHHHHH
Confidence            999999999999999999854   589986 789999 56999999999999999999995 999999999999999999


Q ss_pred             HHHHHh
Q 018512          343 GSIQKG  348 (354)
Q Consensus       343 ~~~~~~  348 (354)
                      +.++..
T Consensus       308 ~~~~~~  313 (326)
T 3pqe_A          308 NILKPH  313 (326)
T ss_dssp             HHHTTT
T ss_pred             HHHHHh
Confidence            998764

>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}

Probab=100.00  E-value=1.9e-60  Score=453.92  Aligned_cols=291  Identities=29%  Similarity=0.462  Sum_probs=264.0

Q ss_pred             CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecC--C--chhHHHHHhcCC----CCCeEEEEeCCCcHHhhhCCCc
Q 018512           41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVV--N--TPGVTADISHMD----TGAVVRGFLGQPQLENALTGMD  112 (354)
Q Consensus        41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~--~--~~g~~~dl~~~~----~~~~v~~~~~~~d~~~al~~aD  112 (354)
                      +.+||+|||+ |.+|+++++.|+..++ .+|+|+|++  +  ++|.++|+.|..    ....+..   +++ +++++|||
T Consensus         7 ~~~kv~ViGa-G~vG~~ia~~l~~~g~-~~v~l~D~~~~~~~~~g~a~dl~~~~~~~~~~~~i~~---t~d-~~a~~~aD   80 (315)
T 3tl2_A            7 KRKKVSVIGA-GFTGATTAFLLAQKEL-ADVVLVDIPQLENPTKGKALDMLEASPVQGFDANIIG---TSD-YADTADSD   80 (315)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTC-CEEEEECCGGGHHHHHHHHHHHHHHHHHHTCCCCEEE---ESC-GGGGTTCS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCC-CeEEEEeccchHHHHHHhhhhHHHhhhhccCCCEEEE---cCC-HHHhCCCC
Confidence            3569999998 9999999999999998 899999998  4  578889998863    2234543   245 48899999


Q ss_pred             EEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCCchHHHHHHHHHhCCCCCCCEEEe-ccch
Q 018512          113 LVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLD  191 (354)
Q Consensus       113 vVIi~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~~~~~~~~~~p~~kviG~-t~ld  191 (354)
                      +||+++|.|+++|++|.|++.+|+++++++++.+.++||++|++++|||+|++|+++    +|.+|+|++||+|+ |.||
T Consensus        81 vVIiaag~p~kpg~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vlvvsNPvd~~t~~~----~k~sg~p~~rviG~gt~LD  156 (315)
T 3tl2_A           81 VVVITAGIARKPGMSRDDLVATNSKIMKSITRDIAKHSPNAIIVVLTNPVDAMTYSV----FKEAGFPKERVIGQSGVLD  156 (315)
T ss_dssp             EEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCSSHHHHHHHH----HHHHCCCGGGEEECCHHHH
T ss_pred             EEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEECCChHHHHHHHH----HHhcCCChHHEEeeccCcH
Confidence            999999999999999999999999999999999999999999999999999998765    67789999999999 9999


Q ss_pred             HHHHHHHHHHHhCCCCCCCcceEEeecCCccccccccccCCCC-----CCChHHHHHHHHHHhcchhHHHhhhccCCcch
Q 018512          192 VVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPC-----SFTQEETEYLTNRIQNGGTEVVEAKAGAGSAT  266 (354)
Q Consensus       192 ~~r~~~~la~~l~v~~~~v~~~v~G~hg~~~~vp~~s~~~v~~-----~~~~~~~~~i~~~v~~~~~~i~~~~~~kg~~~  266 (354)
                      +.|+++++|+++|+++++|+++||||||+ ++||+||++++.+     .++++++++|.+++++++++|++++ |||++.
T Consensus       157 ~~R~~~~la~~lgv~~~~v~~~viG~Hg~-t~vp~~S~~~v~g~p~~~~~~~~~~~~i~~~v~~~g~eii~~~-~kgst~  234 (315)
T 3tl2_A          157 TARFRTFIAQELNLSVKDITGFVLGGHGD-DMVPLVRYSYAGGIPLETLIPKERLEAIVERTRKGGGEIVGLL-GNGSAY  234 (315)
T ss_dssp             HHHHHHHHHHHHTCCGGGEECCEEBCSGG-GCEECGGGCEETTEEGGGTSCHHHHHHHHHHHHTHHHHHHHHH-SSSCCC
T ss_pred             HHHHHHHHHHHhCcCHHHceeeEecCCCC-cceeecccCeECCEEHHHhCCHHHHHHHHHHHHHHHHHHHHhc-CCCcch
Confidence            99999999999999999999999999999 9999999998753     2567778999999999999999974 789999


Q ss_pred             hhHHHHHHHHHHHHHhccCCCCcEEEee-eeeccC-CCccEEEEeEEEcCCCeEEeccCCCCCHHHHHHHHHHHHHHHHH
Q 018512          267 LSMAYAAVKFADACLRGLRGDAGVVECA-FVASQV-TELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGS  344 (354)
Q Consensus       267 ~s~A~a~~~ii~si~~~~~~~~~v~~~~-~~~g~~-~~~~~~svPv~ig~~Gv~~i~~~~~L~~~E~~~l~~sa~~i~~~  344 (354)
                      ||+|.++++++++|++|.+   .++|++ +++|+| .+++|||+||++|++|+++++++ +|+++|+++|++|++.|++.
T Consensus       235 ~a~a~a~~~~~~ail~~~~---~v~~~s~~~~g~yg~~~~~~s~P~~~g~~Gv~~v~~l-~L~~~E~~~l~~s~~~l~~~  310 (315)
T 3tl2_A          235 YAPAASLVEMTEAILKDQR---RVLPAIAYLEGEYGYSDLYLGVPVILGGNGIEKIIEL-ELLADEKEALDRSVESVRNV  310 (315)
T ss_dssp             HHHHHHHHHHHHHHHTTCC---EEEEEEEEEESGGGCEEEEEEEEEEEETTEEEEECCC-CCCHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHcCCC---cEEEEEEeccCccCCCceEEEEEEEEeCCEEEEEcCC-CCCHHHHHHHHHHHHHHHHH
Confidence            9999999999999999854   589997 789999 67999999999999999999996 99999999999999999998


Q ss_pred             HHH
Q 018512          345 IQK  347 (354)
Q Consensus       345 ~~~  347 (354)
                      ++.
T Consensus       311 ~~~  313 (315)
T 3tl2_A          311 MKV  313 (315)
T ss_dssp             HTT
T ss_pred             HHH
Confidence            764

>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}

Probab=100.00  E-value=5.6e-60  Score=454.86  Aligned_cols=295  Identities=26%  Similarity=0.371  Sum_probs=253.8

Q ss_pred             CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCCC-CeEEEEeCCCcHHhhhCCCcEEEEc
Q 018512           41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTG-AVVRGFLGQPQLENALTGMDLVIIP  117 (354)
Q Consensus        41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~~-~~v~~~~~~~d~~~al~~aDvVIi~  117 (354)
                      +.+||+||||+|+||+++++.++..++..+|+|+|+++  ++|.++||+|..+. ..+..   ++|++++++|||+||++
T Consensus         7 ~~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~~k~~g~a~DL~~~~~~~~~i~~---t~d~~~al~dADvVvit   83 (343)
T 3fi9_A            7 TEEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFAVGLEGVAEEIRHCGFEGLNLTF---TSDIKEALTDAKYIVSS   83 (343)
T ss_dssp             CSSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCHHHHHHHHHHHHHHCCTTCCCEE---ESCHHHHHTTEEEEEEC
T ss_pred             CCCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCchhHHHHHHhhhhCcCCCCceEE---cCCHHHHhCCCCEEEEc
Confidence            45799999987999999999999999878999999987  68899999997532 23443   35778999999999999


Q ss_pred             CCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeE-EEEecCCCCCchHHHHHHHHHhCCCCCCCEEEeccchHHHHH
Q 018512          118 AGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNAT-VNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRAN  196 (354)
Q Consensus       118 ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~-viv~tNPv~~~~~~~~~~~~~~~~~p~~kviG~t~ld~~r~~  196 (354)
                      +|.|+++|++|.|++..|+++++++++.++++||+++ ++++|||+|++|+++    +|.+|||++||+|+|.||++||+
T Consensus        84 aG~p~kpG~~R~dLl~~N~~I~~~i~~~i~~~~p~a~~vlvvsNPvd~~t~i~----~k~sg~p~~rv~g~t~LDs~R~~  159 (343)
T 3fi9_A           84 GGAPRKEGMTREDLLKGNAEIAAQLGKDIKSYCPDCKHVIIIFNPADITGLVT----LIYSGLKPSQVTTLAGLDSTRLQ  159 (343)
T ss_dssp             CC-------CHHHHHHHHHHHHHHHHHHHHHHCTTCCEEEECSSSHHHHHHHH----HHHHTCCGGGEEEECCHHHHHHH
T ss_pred             cCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhccCcEEEEEecCchHHHHHHH----HHHcCCCcceEEEecCcHHHHHH
Confidence            9999999999999999999999999999999999996 899999999998765    67779999999999999999999


Q ss_pred             HHHHHHhCCCCCCCc-ceEEeecCCccccccccccCCCC----------CCChHHHHHHHHHHhcchhHHHhhhccCCcc
Q 018512          197 TFVAEVLGLDPRDVD-VPVVGGHAGVTILPLLSQVKPPC----------SFTQEETEYLTNRIQNGGTEVVEAKAGAGSA  265 (354)
Q Consensus       197 ~~la~~l~v~~~~v~-~~v~G~hg~~~~vp~~s~~~v~~----------~~~~~~~~~i~~~v~~~~~~i~~~~~~kg~~  265 (354)
                      +++|+++|++|++|+ ++||||||+ +++|+||.+++.+          .+++++|++|.+++++++++|++.|   |++
T Consensus       160 ~~la~~l~v~~~~v~~~~ViGeHgd-s~vp~~S~a~v~G~pl~~~~~~~~~~~~~~~~i~~~v~~~g~eIi~~k---g~s  235 (343)
T 3fi9_A          160 SELAKHFGIKQSLVTNTRTYGGHGE-QMAVFASTAKVNGTPLTDLIGTDKLTNEQWAELKQRVVKGGANIIKLR---GRS  235 (343)
T ss_dssp             HHHHHHHTSCGGGEECCCEEESSGG-GEEECGGGCEETTEEGGGTTTBTTBCHHHHHHHHHHHHTHHHHHHHHH---SSC
T ss_pred             HHHHHHhCcCHHHcccceEEEcCCC-ceeeeeecceECCEEhhHhccccCCCHHHHHHHHHHHHhhhHHHHHcc---CCC
Confidence            999999999999996 899999999 9999999998742          1467789999999999999999965   444


Q ss_pred             -hhhHHHHHHHHHHHHHhccCCCCcEEEee-eeeccCCCccEEEEeEEEcCCCeEEeccCCC-CCHHHHHHHHHHHHHHH
Q 018512          266 -TLSMAYAAVKFADACLRGLRGDAGVVECA-FVASQVTELPFFASKVRLGRQGAEEIFQLGP-LNEYERIGLEKAKKELA  342 (354)
Q Consensus       266 -~~s~A~a~~~ii~si~~~~~~~~~v~~~~-~~~g~~~~~~~~svPv~ig~~Gv~~i~~~~~-L~~~E~~~l~~sa~~i~  342 (354)
                       .||+|+++++++++|++|++.   ++|++ +++|++.+++|||+||++|++|++.+ .+.+ |+++|+++|++|++.|+
T Consensus       236 s~~s~A~a~~~~~~ail~d~~~---v~~~s~~~~g~~~~~v~~s~P~~lg~~Gv~~~-~~~~ll~~~E~~~l~~Sa~~l~  311 (343)
T 3fi9_A          236 SFQSPSYVSIEMIRAAMGGEAF---RWPAGCYVNVPGFEHIMMAMETTITKDGVKHS-DINQLGNEAERAALKESYSHLA  311 (343)
T ss_dssp             CCHHHHHHHHHHHHHHTTSSCC---CSCEEEEEEETTEEEEEEEESEEEETTEEEEC-CGGGSSCHHHHHHHHHHHHHHH
T ss_pred             cHHhHHHHHHHHHHHHHhCCCc---eEEEEEEEeCCCcCceEEEeEEEEeCCceEEE-ecCCCCCHHHHHHHHHHHHHHH
Confidence             569999999999999999763   66665 78887777999999999999999876 4322 89999999999999999


Q ss_pred             HHHHHhhh
Q 018512          343 GSIQKGIS  350 (354)
Q Consensus       343 ~~~~~~~~  350 (354)
                      +.++....
T Consensus       312 ~~~~~~~~  319 (343)
T 3fi9_A          312 KLRDEVIA  319 (343)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHH
Confidence            99887654

>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*

Probab=100.00  E-value=4.4e-59  Score=447.03  Aligned_cols=299  Identities=22%  Similarity=0.365  Sum_probs=260.8

Q ss_pred             CCCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCC-CCeEEEEeCCCcHHhhhCCCcEEE
Q 018512           39 GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDT-GAVVRGFLGQPQLENALTGMDLVI  115 (354)
Q Consensus        39 ~~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~-~~~v~~~~~~~d~~~al~~aDvVI  115 (354)
                      +++.+||+|||| |+||+++++.|+..++.+||+|+|+++  +++.++||.|... ...++...  ++ +++++|||+||
T Consensus         6 ~~~~~KI~IiGa-G~vG~~la~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~~--~~-~~a~~~aDvVi   81 (326)
T 2zqz_A            6 DKDHQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLSNALPFTSPKKIYS--AE-YSDAKDADLVV   81 (326)
T ss_dssp             CCCCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEE--CC-GGGGGGCSEEE
T ss_pred             cCCCCEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCCchHhHHHHHHHHHHHHhcCCeEEEE--CC-HHHhCCCCEEE
Confidence            456689999999 999999999999989889999999987  6788999999742 12334332  23 68899999999


Q ss_pred             EcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCCchHHHHHHHHHhCCCCCCCEEEe-ccchHHH
Q 018512          116 IPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVR  194 (354)
Q Consensus       116 i~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~~~~~~~~~~p~~kviG~-t~ld~~r  194 (354)
                      +++|.|+++|++|.|++.+|+++++++++.|+++||++|++++|||+|++|++    +++.+++|++||||+ |.||+.|
T Consensus        82 i~ag~~~k~g~~R~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tNPv~~~t~~----~~k~s~~p~~rviG~gt~LD~~R  157 (326)
T 2zqz_A           82 ITAGAPQKPGETRLDLVNKNLKILKSIVDPIVDSGFNGIFLVAANPVDILTYA----TWKLSGFPKNRVVGSGTSLDTAR  157 (326)
T ss_dssp             ECCCCC-----CHHHHHHHHHHHHHHHHHHHHHHTCCSEEEECSSSHHHHHHH----HHHHHCCCGGGEEECTTHHHHHH
T ss_pred             EcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCCcHHHHHHH----HHHHcCCCHHHEEEccccchHHH
Confidence            99999999999999999999999999999999999999999999999999765    478889999999999 9999999


Q ss_pred             HHHHHHHHhCCCCCCCcceEEeecCCccccccccccCCCC-----------CCChHHHHHHHHHHhcchhHHHhhhccCC
Q 018512          195 ANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPC-----------SFTQEETEYLTNRIQNGGTEVVEAKAGAG  263 (354)
Q Consensus       195 ~~~~la~~l~v~~~~v~~~v~G~hg~~~~vp~~s~~~v~~-----------~~~~~~~~~i~~~v~~~~~~i~~~~~~kg  263 (354)
                      +++++|+++|+++++|+++|||+||+ +++|+||++++..           .++++.++++.+++++++++|++   +||
T Consensus       158 ~~~~la~~lgv~~~~v~~~v~G~HG~-t~~p~~s~~~v~g~~~~e~~~~~~~~~~~~~~~i~~~v~~~g~eii~---~kG  233 (326)
T 2zqz_A          158 FRQSIAEMVNVDARSVHAYIMGEHGD-TEFPVWSHANIGGVTIAEWVKAHPEIKEDKLVKMFEDVRDAAYEIIK---LKG  233 (326)
T ss_dssp             HHHHHHHHHTCCGGGEECCEEBSSST-TCEECGGGCEETTEEHHHHHHHCTTSCHHHHHHHHHHHHTHHHHHHH---HHS
T ss_pred             HHHHHHHHhCCChhheEEEEecccCC-ceEeehhhceECCEEHHHhhcccccCCHHHHHHHHHHHHHhHHHHHH---cCC
Confidence            99999999999999999999999999 9999999987632           14566788999999999999999   468


Q ss_pred             cchhhHHHHHHHHHHHHHhccCCCCcEEEee-eeeccC-CCccEEEEeEEEcCCCeEEeccCCCCCHHHHHHHHHHHHHH
Q 018512          264 SATLSMAYAAVKFADACLRGLRGDAGVVECA-FVASQV-TELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKEL  341 (354)
Q Consensus       264 ~~~~s~A~a~~~ii~si~~~~~~~~~v~~~~-~~~g~~-~~~~~~svPv~ig~~Gv~~i~~~~~L~~~E~~~l~~sa~~i  341 (354)
                      ++.|++|.++++++++|++|++   .+++++ +++|+| .+++|+|+||++|++|+++++++ +|+++|+++|++|++.|
T Consensus       234 ~t~~~~a~aa~~~~~ai~~~~~---~~~~vsv~~~G~yg~~~~~~svP~~ig~~Gv~~i~~~-~L~~~e~~~l~~s~~~l  309 (326)
T 2zqz_A          234 ATFYGIATALARISKAILNDEN---AVLPLSVYMDGQYGLNDIYIGTPAVINRNGIQNILEI-PLTDHEEESMQKSASQL  309 (326)
T ss_dssp             CCCHHHHHHHHHHHHHHHTTCC---EEEEEEEEEESGGGCEEEEEEEEEEEETTEEEEECCC-CCCHHHHHHHHHHHHHH
T ss_pred             CcHHHHHHHHHHHHHHHHhCCC---cEEEEEEeccCccCCCceEEEEEEEEcCCeeEEEecC-CCCHHHHHHHHHHHHHH
Confidence            9999999999999999999965   488887 779998 34999999999999999999995 99999999999999999


Q ss_pred             HHHHHHhhhhhc
Q 018512          342 AGSIQKGISFSK  353 (354)
Q Consensus       342 ~~~~~~~~~~~~  353 (354)
                      ++.++.+.++++
T Consensus       310 ~~~~~~~~~~~~  321 (326)
T 2zqz_A          310 KKVLTDAFAKND  321 (326)
T ss_dssp             HHHHHHHC----
T ss_pred             HHHHHHHHHhhh
Confidence            999999887764

>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1

Probab=100.00  E-value=3.7e-59  Score=446.23  Aligned_cols=297  Identities=22%  Similarity=0.353  Sum_probs=257.4

Q ss_pred             CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCC-CCeEEEEeCCCcHHhhhCCCcEEEEc
Q 018512           41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDT-GAVVRGFLGQPQLENALTGMDLVIIP  117 (354)
Q Consensus        41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~-~~~v~~~~~~~d~~~al~~aDvVIi~  117 (354)
                      +.+||+|||| |+||+++++.|+..++.+||+|+|+++  +++.++||.|... ...++...  ++ +++++|||+||++
T Consensus         4 ~~~KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~v~~--~~-~~a~~~aDvVii~   79 (318)
T 1ez4_A            4 NHQKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYS--GE-YSDCKDADLVVIT   79 (318)
T ss_dssp             TBCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEE--CC-GGGGTTCSEEEEC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCeEEEE--CC-HHHhCCCCEEEEC
Confidence            3479999999 999999999999999889999999987  6788999998742 12334332  23 6889999999999


Q ss_pred             CCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCCchHHHHHHHHHhCCCCCCCEEEe-ccchHHHHH
Q 018512          118 AGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRAN  196 (354)
Q Consensus       118 ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~~~~~~~~~~p~~kviG~-t~ld~~r~~  196 (354)
                      +|.|+++|++|.|++.+|+++++++++.|+++||++|++++|||+|++|++    +++.+++|++||||+ |.||+.|++
T Consensus        80 ag~~~~~g~~R~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tNPv~~~t~~----~~k~s~~p~~rviG~gt~LD~~R~~  155 (318)
T 1ez4_A           80 AGAPQKPGESRLDLVNKNLNILSSIVKPVVDSGFDGIFLVAANPVDILTYA----TWKFSGFPKERVIGSGTSLDSSRLR  155 (318)
T ss_dssp             CCC----------CHHHHHHHHHHHHHHHHHTTCCSEEEECSSSHHHHHHH----HHHHHCCCGGGEEECTTHHHHHHHH
T ss_pred             CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeCCcHHHHHHH----HHHHcCCCHHHEEeccccchHHHHH
Confidence            999999999999999999999999999999999999999999999999765    478889999999999 999999999


Q ss_pred             HHHHHHhCCCCCCCcceEEeecCCccccccccccCCCC----------CCChHHHHHHHHHHhcchhHHHhhhccCCcch
Q 018512          197 TFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPC----------SFTQEETEYLTNRIQNGGTEVVEAKAGAGSAT  266 (354)
Q Consensus       197 ~~la~~l~v~~~~v~~~v~G~hg~~~~vp~~s~~~v~~----------~~~~~~~~~i~~~v~~~~~~i~~~~~~kg~~~  266 (354)
                      +++|+++|+++++|+++|||+||+ +++|+||++++..          .++++.++++.+++++++++|++   +||+++
T Consensus       156 ~~la~~lgv~~~~v~~~v~G~HG~-t~~p~~s~~~v~g~~~~~~~~~~~~~~~~~~~~~~~v~~~g~eii~---~kg~t~  231 (318)
T 1ez4_A          156 VALGKQFNVDPRSVDAYIMGEHGD-SEFAAYSTATIGTRPVRDVAKEQGVSDDDLAKLEDGVRNKAYDIIN---LKGATF  231 (318)
T ss_dssp             HHHHHHHTCCGGGEECCEESSSSS-SCEECGGGCEETTEEHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHH---HHSCCC
T ss_pred             HHHHHHhCcChhHEEEEEecccCC-ceEEEehhhcCCCeeHHHHhhccCCCHHHHHHHHHHHHHhhhhhee---CCCcch
Confidence            999999999999999999999999 9999999988642          25666789999999999999999   468999


Q ss_pred             hhHHHHHHHHHHHHHhccCCCCcEEEee-eeeccC-CCccEEEEeEEEcCCCeEEeccCCCCCHHHHHHHHHHHHHHHHH
Q 018512          267 LSMAYAAVKFADACLRGLRGDAGVVECA-FVASQV-TELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGS  344 (354)
Q Consensus       267 ~s~A~a~~~ii~si~~~~~~~~~v~~~~-~~~g~~-~~~~~~svPv~ig~~Gv~~i~~~~~L~~~E~~~l~~sa~~i~~~  344 (354)
                      |++|.++++++++|++|++   .+++++ +++|+| .+++|+|+||++|++|+++++++ +|+++|+++|++|++.|++.
T Consensus       232 ~~~a~a~~~~~~ai~~~~~---~~~~vs~~~~G~yg~~~~~~~vP~~ig~~Gv~~i~~~-~L~~~e~~~l~~s~~~l~~~  307 (318)
T 1ez4_A          232 YGIGTALMRISKAILRDEN---AVLPVGAYMDGQYGLNDIYIGTPAIIGGTGLKQIIES-PLSADELKKMQDSAATLKKV  307 (318)
T ss_dssp             HHHHHHHHHHHHHHHTTCC---EEEEEEEEEESGGGCEEEEEEEEEEEETTEEEEECCC-CCCHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhCCC---cEEEEEEeecCccCCCceEEEEEEEEeCCeeEEEcCC-CCCHHHHHHHHHHHHHHHHH
Confidence            9999999999999999965   488887 679998 44999999999999999999995 99999999999999999999


Q ss_pred             HHHhhhhhc
Q 018512          345 IQKGISFSK  353 (354)
Q Consensus       345 ~~~~~~~~~  353 (354)
                      ++.+.++++
T Consensus       308 ~~~~~~~~~  316 (318)
T 1ez4_A          308 LNDGLAELE  316 (318)
T ss_dssp             HHHHHHHHT
T ss_pred             HHHHHHHhh
Confidence            999988765

>7mdh_A Protein (malate dehydrogenase); chloroplastic malate dehydrogenase (NADP+), activated by LIG chloroplastic malate dehydrogenase; 2.40A {Sorghum bicolor} SCOP: c.2.1.5 d.162.1.1 PDB: 1civ_A*

Probab=100.00  E-value=3.2e-58  Score=445.12  Aligned_cols=300  Identities=19%  Similarity=0.202  Sum_probs=251.1

Q ss_pred             CCCeEEEEcCCCchHHHHHHHHHhCCCCcE---EEEEecCC------chhHHHHHhcCCCC--CeEEEEeCCCcHHhhhC
Q 018512           41 AGFKVAILGAAGGIGQPLAMLMKINPLVSV---LHLYDVVN------TPGVTADISHMDTG--AVVRGFLGQPQLENALT  109 (354)
Q Consensus        41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~e---i~L~D~~~------~~g~~~dl~~~~~~--~~v~~~~~~~d~~~al~  109 (354)
                      +++||+||||+|+||+++++.|+.++++++   |+|+|.+.      ++|.++||+|+.+.  ..++..   ++.+++++
T Consensus        31 ~~~KV~ViGAaG~VG~~la~~l~~~~l~~e~~~l~L~d~d~~~~~~~~~G~amDL~h~~~p~~~~v~i~---~~~y~~~~  107 (375)
T 7mdh_A           31 KLVNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSLYPLLREVSIG---IDPYEVFE  107 (375)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEE---SCHHHHTT
T ss_pred             CCCEEEEECCCChHHHHHHHHHHcCCcCCCCceeEEEecCccchhhhhHHHHHhHHhhhhhhcCCcEEe---cCCHHHhC
Confidence            457999999779999999999999998776   77766543      58899999998742  223332   34468999


Q ss_pred             CCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhh-CCCeEEEEecCCCCCchHHHHHHHHHhCCCCCCCEEEe-
Q 018512          110 GMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKC-CPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-  187 (354)
Q Consensus       110 ~aDvVIi~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~-~p~a~viv~tNPv~~~~~~~~~~~~~~~~~p~~kviG~-  187 (354)
                      |||+||++||.|+++||+|.|++..|+++++++++.|.++ +|+++|+++|||+|++||++    ++.+++++.|+||. 
T Consensus       108 daDvVVitag~prkpG~tR~DLl~~N~~I~k~i~~~i~~~a~p~~ivlVvsNPvD~~t~ia----~k~sg~~~~rvig~g  183 (375)
T 7mdh_A          108 DVDWALLIGAKPRGPGMERAALLDINGQIFADQGKALNAVASKNVKVLVVGNPCNTNALIC----LKNAPDIPAKNFHAL  183 (375)
T ss_dssp             TCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHHHHHH----HHTCTTSCGGGEEEC
T ss_pred             CCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCchhHHHHHH----HHHcCCCCccEEEee
Confidence            9999999999999999999999999999999999999998 79999999999999998765    67667777788898 


Q ss_pred             ccchHHHHHHHHHHHhCCCCCCCcc-eEEeecCCccccccccccCCCC----C-CChHHH--HHHHHHHhcchhHHHhhh
Q 018512          188 TMLDVVRANTFVAEVLGLDPRDVDV-PVVGGHAGVTILPLLSQVKPPC----S-FTQEET--EYLTNRIQNGGTEVVEAK  259 (354)
Q Consensus       188 t~ld~~r~~~~la~~l~v~~~~v~~-~v~G~hg~~~~vp~~s~~~v~~----~-~~~~~~--~~i~~~v~~~~~~i~~~~  259 (354)
                      |.||++||++++|+++|++|++|+. +||||||+ ++||+||++++.+    . ..+++|  ++|.+++++++++|++.|
T Consensus       184 T~LDsaR~r~~lA~~lgv~~~~V~~v~V~GeHgd-t~vp~~S~a~V~G~pl~~~~~~~~~~~~~i~~~v~~~g~eII~~k  262 (375)
T 7mdh_A          184 TRLDENRAKCQLALKAGVFYDKVSNVTIWGNHST-TQVPDFLNAKIDGRPVKEVIKRTKWLEEEFTITVQKRGGALIQKW  262 (375)
T ss_dssp             CHHHHHHHHHHHHHHTTSCGGGEECCEEEBCSST-TCEEECSSCEETTEEGGGTCCCHHHHHHHHHHHHHTHHHHHHHHT
T ss_pred             ehHHHHHHHHHHHHHhCcChhhcccceEEecCCC-ceeeeeecccCCCEEhhHhccchhhHHHHHHHHHHHHHHHHHHhc
Confidence            9999999999999999999999985 89999999 9999999998743    1 334444  689999999999999954


Q ss_pred             ccCCcchhh-HHHHHHHHHHHHHhccCCCCcEEEee-eeec-cC--CCccEEEEeEEEcCCCeEEeccCCCCCHHHHHHH
Q 018512          260 AGAGSATLS-MAYAAVKFADACLRGLRGDAGVVECA-FVAS-QV--TELPFFASKVRLGRQGAEEIFQLGPLNEYERIGL  334 (354)
Q Consensus       260 ~~kg~~~~s-~A~a~~~ii~si~~~~~~~~~v~~~~-~~~g-~~--~~~~~~svPv~ig~~Gv~~i~~~~~L~~~E~~~l  334 (354)
                         |+++|+ .|.++++.+.+|+++.+. +.++||+ +++| +|  ++++|||+||++|++|++++++.++|+++|+++|
T Consensus       263 ---G~ts~a~aa~~i~~~i~~~l~g~d~-~~v~~vs~~~~G~~YGi~~dv~~s~P~vlg~~Gv~~iv~~l~L~~~E~~~l  338 (375)
T 7mdh_A          263 ---GRSSAASTAVSIADAIKSLVTPTPE-GDWFSTGVYTTGNPYGIAEDIVFSMPCRSKGDGDYELATDVSNDDFLWERI  338 (375)
T ss_dssp             ---SSCCHHHHHHHHHHHHHHHHSCCCT-TCCEEEEEECTTCSSCCCSSSEEEEEEECCSSSCCEECCCCCCCHHHHHHH
T ss_pred             ---CCCchHHHHHHHHHHHHHHhcCCCC-CeEEEEEEEeCCccCCCCCceEEEEEEEEcCCeeEEecCCCCCCHHHHHHH
Confidence               666653 444455555555654332 2489998 6799 68  5799999999999999999996349999999999


Q ss_pred             HHHHHHHHHHHHHhhhhh
Q 018512          335 EKAKKELAGSIQKGISFS  352 (354)
Q Consensus       335 ~~sa~~i~~~~~~~~~~~  352 (354)
                      ++|++.|+++.+.+.+++
T Consensus       339 ~~Sa~~L~~e~~~~~~~~  356 (375)
T 7mdh_A          339 KKSEAELLAEKKCVAHLT  356 (375)
T ss_dssp             HHHHHHHHHHHHHTHHHH
T ss_pred             HHHHHHHHHHHHHHHHHH
Confidence            999999999998876654

>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*

Probab=100.00  E-value=6.2e-59  Score=446.66  Aligned_cols=303  Identities=23%  Similarity=0.333  Sum_probs=261.0

Q ss_pred             CCCeEEEEcCCCchHHHHHHHHHhCCCCcE-----EEEEecCC----chhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCC
Q 018512           41 AGFKVAILGAAGGIGQPLAMLMKINPLVSV-----LHLYDVVN----TPGVTADISHMDTGAVVRGFLGQPQLENALTGM  111 (354)
Q Consensus        41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~e-----i~L~D~~~----~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~a  111 (354)
                      +++||+|+||+|+||+++++.|+.++++++     |+|+|+++    ++|.++||+|+.. +.+..+..+++.+++++||
T Consensus         2 ~~~kV~V~GaaG~VG~~la~~L~~~~~~~e~~~~~l~L~Di~~~~~~~~g~a~DL~~~~~-~~~~~~~~~~~~~~~~~da   80 (333)
T 5mdh_A            2 EPIRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCAL-PLLKDVIATDKEEIAFKDL   80 (333)
T ss_dssp             CCEEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCC-TTEEEEEEESCHHHHTTTC
T ss_pred             CCeEEEEECCCCHHHHHHHHHHHhCCCccccCCCEEEEEeCCCccccchhhHhhhHhhhh-cccCCEEEcCCcHHHhCCC
Confidence            468999999779999999999999888877     99999974    5789999999753 2223322234567899999


Q ss_pred             cEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCe-EEEEecCCCCCchHHHHHHHHHhCCCCCCCEEEe-cc
Q 018512          112 DLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNA-TVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TM  189 (354)
Q Consensus       112 DvVIi~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a-~viv~tNPv~~~~~~~~~~~~~~~~~p~~kviG~-t~  189 (354)
                      |+||++||.|+++|++|.|++..|+++++++++.+++++|++ |++++|||+|++|+++    ++.++++|+++||. |.
T Consensus        81 DvVvitAg~prkpG~tR~dll~~N~~i~~~i~~~i~~~~~~~~~vivvsNPvd~~t~~~----~~~~~~~p~~~ig~~t~  156 (333)
T 5mdh_A           81 DVAILVGSMPRRDGMERKDLLKANVKIFKCQGAALDKYAKKSVKVIVVGNPANTNCLTA----SKSAPSIPKENFSCLTR  156 (333)
T ss_dssp             SEEEECCSCCCCTTCCTTTTHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHHHHHH----HHTCTTSCGGGEEECCH
T ss_pred             CEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCCchHHHHHHH----HHHcCCCCcCEEEEEEh
Confidence            999999999999999999999999999999999999999987 7999999999998765    67775444455776 99


Q ss_pred             chHHHHHHHHHHHhCCCCCCCcce-EEeecCCccccccccccCC--CC-CC------ChHHH--HHHHHHHhcchhHHHh
Q 018512          190 LDVVRANTFVAEVLGLDPRDVDVP-VVGGHAGVTILPLLSQVKP--PC-SF------TQEET--EYLTNRIQNGGTEVVE  257 (354)
Q Consensus       190 ld~~r~~~~la~~l~v~~~~v~~~-v~G~hg~~~~vp~~s~~~v--~~-~~------~~~~~--~~i~~~v~~~~~~i~~  257 (354)
                      ||+.|+++++|+++|++|++|+++ ||||||+ ++||+||++++  .+ ++      .++.|  +++.+++++++++|++
T Consensus       157 LDs~R~~~~la~~l~v~~~~v~~~vV~GeHgd-s~vp~~S~a~v~i~g~~~~~~~~~~~~~~~~~~~~~~v~~~g~eIi~  235 (333)
T 5mdh_A          157 LDHNRAKAQIALKLGVTSDDVKNVIIWGNHSS-TQYPDVNHAKVKLQAKEVGVYEAVKDDSWLKGEFITTVQQRGAAVIK  235 (333)
T ss_dssp             HHHHHHHHHHHHHHTCCGGGEECCEEEBCSST-TCEEECTTCEEECSSCEEEHHHHHCCHHHHHTHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhCcCHHHeeecEEEEcCCC-CEEEeeeccEeccCCeeccHHHhhccccccHHHHHHHHHHHHHHHHH
Confidence            999999999999999999999987 5999999 99999999974  22 22      23333  5899999999999999


Q ss_pred             hhccCCcchhhHHHHHHHHHHHHHhccCCCCcEEEee-eeec-cC--CCccEEEEeEEEcCCCeEEeccCCCCCHHHHHH
Q 018512          258 AKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECA-FVAS-QV--TELPFFASKVRLGRQGAEEIFQLGPLNEYERIG  333 (354)
Q Consensus       258 ~~~~kg~~~~s~A~a~~~ii~si~~~~~~~~~v~~~~-~~~g-~~--~~~~~~svPv~ig~~Gv~~i~~~~~L~~~E~~~  333 (354)
                      .|  ++++.|++|.++++++++|++|++.+ .++||+ +++| +|  ++++|||+||++ ++|++++++.++|+++|+++
T Consensus       236 ~k--~~ssa~~~a~~~~~~~~~il~~~~~~-~v~~~s~~~~G~~YGi~~~v~~s~P~~~-~~Gv~~iv~~l~L~~~E~~~  311 (333)
T 5mdh_A          236 AR--KLSSAMSAAKAICDHVRDIWFGTPEG-EFVSMGIISDGNSYGVPDDLLYSFPVTI-KDKTWKIVEGLPINDFSREK  311 (333)
T ss_dssp             HH--SSCCCHHHHHHHHHHHHHHHHCCCTT-CCEEEEEECTTCSSSCCSSCEEEEEEEE-ETTEEEECCCCCCCHHHHHH
T ss_pred             cc--CchHHHHHHHHHHHHHHHHhcCCCCC-eEEEEEEecCCcccCCCCCeEEEEEEEE-cCCeEEEcCCCCCCHHHHHH
Confidence            65  46789999999999999999997532 489998 5699 99  479999999999 99999998734999999999


Q ss_pred             HHHHHHHHHHHHHHhhhhhc
Q 018512          334 LEKAKKELAGSIQKGISFSK  353 (354)
Q Consensus       334 l~~sa~~i~~~~~~~~~~~~  353 (354)
                      |++|++.|++.+++++++++
T Consensus       312 l~~sa~~L~~~~~~~~~~l~  331 (333)
T 5mdh_A          312 MDLTAKELAEEKETAFEFLS  331 (333)
T ss_dssp             HHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHh
Confidence            99999999999999999876

>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}

Probab=100.00  E-value=4.9e-58  Score=441.14  Aligned_cols=307  Identities=23%  Similarity=0.313  Sum_probs=249.4

Q ss_pred             hcccCCCCCCCeEEEEcCCCchHHHHHHHHHhCCCCc-----EEEEEecCC----chhHHHHHhcCCCCCeEEEEeCCCc
Q 018512           33 KCRAKGGAAGFKVAILGAAGGIGQPLAMLMKINPLVS-----VLHLYDVVN----TPGVTADISHMDTGAVVRGFLGQPQ  103 (354)
Q Consensus        33 ~~~~~~~~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~-----ei~L~D~~~----~~g~~~dl~~~~~~~~v~~~~~~~d  103 (354)
                      +++..+...+.||+|+||+|+||++++++|++.+++.     +|+|||+++    ++|.++||+|+.+........ +++
T Consensus        15 ~~~~~~s~~~vKVaViGAaG~IG~~la~~la~~~l~~~~~~~eL~L~Di~~~~~~~~Gva~DL~~~~~~~~~~~~~-~~~   93 (345)
T 4h7p_A           15 QTQGPGSMSAVKVAVTGAAGQIGYALVPLIARGALLGPTTPVELRLLDIEPALKALAGVEAELEDCAFPLLDKVVV-TAD   93 (345)
T ss_dssp             -------CCCEEEEEESTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTTCTTEEEEEE-ESC
T ss_pred             cccCCCCCCCCEEEEECcCcHHHHHHHHHHHhccccCCCCccEEEEECCCCccccchhhhhhhhhcCccCCCcEEE-cCC
Confidence            3444455566799999998999999999999887654     999999986    478899999987544444433 356


Q ss_pred             HHhhhCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecCCCCCchHHHHHHHHHhCCCCCC
Q 018512          104 LENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNSTVPIAAEVFKKAGTYDPK  182 (354)
Q Consensus       104 ~~~al~~aDvVIi~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~-p~a~viv~tNPv~~~~~~~~~~~~~~~~~p~~  182 (354)
                      .+++++|||+||++||.|+++||+|.|++..|+++++++++.|.++| |+++|+++|||+|++++++   +++.+|+|+.
T Consensus        94 ~~~a~~~advVvi~aG~prkpGmtR~DLl~~Na~I~~~~~~~i~~~a~~~~~vlvvsNPvd~~~~i~---~~~~~g~~~~  170 (345)
T 4h7p_A           94 PRVAFDGVAIAIMCGAFPRKAGMERKDLLEMNARIFKEQGEAIAAVAASDCRVVVVGNPANTNALIL---LKSAQGKLNP  170 (345)
T ss_dssp             HHHHTTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHHHHHH---HHHTTTCSCG
T ss_pred             hHHHhCCCCEEEECCCCCCCCCCCHHHHHHHhHHHHHHHHHHHHhhccCceEEEEeCCCcchHHHHH---HHHccCCCCc
Confidence            78999999999999999999999999999999999999999999997 7999999999999999875   3456787777


Q ss_pred             CEEEe-ccchHHHHHHHHHHHhCCCCCCCc-ceEEeecCCccccccccccCCCC-----CCChHHH-HHHHHHHhcchhH
Q 018512          183 KLLGV-TMLDVVRANTFVAEVLGLDPRDVD-VPVVGGHAGVTILPLLSQVKPPC-----SFTQEET-EYLTNRIQNGGTE  254 (354)
Q Consensus       183 kviG~-t~ld~~r~~~~la~~l~v~~~~v~-~~v~G~hg~~~~vp~~s~~~v~~-----~~~~~~~-~~i~~~v~~~~~~  254 (354)
                      |+||. |.||++|+++++|+++|++|++|+ .+|||+||+ ++||+||.+.+..     .++++.+ +++.+++++++++
T Consensus       171 r~i~~~t~LDs~R~~~~la~~~~v~~~~V~~~~V~G~HG~-t~vp~~s~a~v~g~~~~~~~~~~~~~~~~~~~v~~~g~e  249 (345)
T 4h7p_A          171 RHVTAMTRLDHNRALSLLARKAGVPVSQVRNVIIWGNHSS-TQVPDTDSAVIGTTPAREAIKDDALDDDFVQVVRGRGAE  249 (345)
T ss_dssp             GGEEECCHHHHHHHHHHHHHHHTSCGGGEECCEEEBCSST-TCEEECTTCEETTEEGGGGCCC------HHHHHHHHHHH
T ss_pred             ceeeeccchhHHHHHHHHHHHHCcChhheecceeecCCCC-eEEeeeccceECCccHHHhcchhhHHHHHHHHHHhhhhh
Confidence            66666 999999999999999999999996 678999999 9999999998753     1333333 5789999999999


Q ss_pred             HHhhhccCCcchhhHHHHHHHHHHHHHhccCCCCcEEEee-ee-eccC--CCccEEEEeEEEcCCCeEEeccCCCCCHHH
Q 018512          255 VVEAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECA-FV-ASQV--TELPFFASKVRLGRQGAEEIFQLGPLNEYE  330 (354)
Q Consensus       255 i~~~~~~kg~~~~s~A~a~~~ii~si~~~~~~~~~v~~~~-~~-~g~~--~~~~~~svPv~ig~~Gv~~i~~~~~L~~~E  330 (354)
                      |++.|  ++++.||+|.++++++++|+++.+... ++++. +. +|+|  ++++|||+||+++ +|.+++++.++|+++|
T Consensus       250 Ii~~k--g~ss~~s~a~a~~~~~~~~l~~~~~~~-~vs~~v~s~~g~YGi~~~v~~s~Pv~~~-~G~~~iv~~l~l~~~e  325 (345)
T 4h7p_A          250 IIQLR--GLSSAMSAAKAAVDHVHDWIHGTPEGV-YVSMGVYSDENPYGVPSGLIFSFPCTCH-AGEWTVVSGKLNGDLG  325 (345)
T ss_dssp             HHHHH--SSCCCHHHHHHHHHHHHHHHHCCCTTC-CEEEEEECTTCTTCCCSSCEEEEEEEEE-TTEEEECCSCC-----
T ss_pred             hhhcC--CCcchhhHHHHHHHHHHHHhcCCCCce-EEEEEEEeCCCCcCCCCCEEEEEEEEEe-CCEEEEeCCCCCCHHH
Confidence            99976  467899999999999999999987543 33443 34 5888  6899999999997 7888888766999999


Q ss_pred             HHHHHHHHHHHHHHHHHh
Q 018512          331 RIGLEKAKKELAGSIQKG  348 (354)
Q Consensus       331 ~~~l~~sa~~i~~~~~~~  348 (354)
                      |++|++|+++|+++...+
T Consensus       326 ~~~l~~s~~~L~~E~~~A  343 (345)
T 4h7p_A          326 KQRLASTIAELQEERAQA  343 (345)
T ss_dssp             CGGGHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHHHc
Confidence            999999999999987654

>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A

Probab=100.00  E-value=3.6e-58  Score=438.08  Aligned_cols=290  Identities=22%  Similarity=0.338  Sum_probs=261.3

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCC-CCeEEEEeCCCcHHhhhCCCcEEEEcCC
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDT-GAVVRGFLGQPQLENALTGMDLVIIPAG  119 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~-~~~v~~~~~~~d~~~al~~aDvVIi~ag  119 (354)
                      |||+|||| |+||+++++.|+..++.+||+|+|+++  +++.++||.|... ...++...  ++ +++++|||+||+++|
T Consensus         1 ~KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~k~~g~a~dl~~~~~~~~~~~v~~--~~-~~a~~~aD~Vii~ag   76 (310)
T 2xxj_A            1 MKVGIVGS-GMVGSATAYALALLGVAREVVLVDLDRKLAQAHAEDILHATPFAHPVWVWA--GS-YGDLEGARAVVLAAG   76 (310)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHTTGGGSCCCEEEE--CC-GGGGTTEEEEEECCC
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHHhHhhcCCeEEEE--CC-HHHhCCCCEEEECCC
Confidence            69999999 999999999999999889999999987  6788999999742 12333332  34 688999999999999


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCCchHHHHHHHHHhCCCCCCCEEEe-ccchHHHHHHH
Q 018512          120 VPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRANTF  198 (354)
Q Consensus       120 ~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~~~~~~~~~~p~~kviG~-t~ld~~r~~~~  198 (354)
                      .|+++|++|.|++.+|+++++++++.|+++||++|++++|||+|++|+++    ++.+++|++||||+ |.||+.|++++
T Consensus        77 ~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tNPv~~~t~~~----~k~s~~p~~rviG~gt~LD~~R~~~~  152 (310)
T 2xxj_A           77 VAQRPGETRLQLLDRNAQVFAQVVPRVLEAAPEAVLLVATNPVDVMTQVA----YALSGLPPGRVVGSGTILDTARFRAL  152 (310)
T ss_dssp             CCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECSSSHHHHHHHH----HHHHTCCGGGEEECTTHHHHHHHHHH
T ss_pred             CCCCCCcCHHHHHHhhHHHHHHHHHHHHHHCCCcEEEEecCchHHHHHHH----HHHcCCCHHHEEecCcchhHHHHHHH
Confidence            99999999999999999999999999999999999999999999998654    78889999999999 99999999999


Q ss_pred             HHHHhCCCCCCCcceEEeecCCccccccccccCCCC------------CCChHHHHHHHHHHhcchhHHHhhhccCCcch
Q 018512          199 VAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPC------------SFTQEETEYLTNRIQNGGTEVVEAKAGAGSAT  266 (354)
Q Consensus       199 la~~l~v~~~~v~~~v~G~hg~~~~vp~~s~~~v~~------------~~~~~~~~~i~~~v~~~~~~i~~~~~~kg~~~  266 (354)
                      +|+++|+++++|+++||||||+ +++|+||++++..            .++++.++++.++++++++++++   +||++.
T Consensus       153 la~~lgv~~~~v~~~v~G~HG~-t~~p~~s~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~eii~---~kg~t~  228 (310)
T 2xxj_A          153 LAEYLRVAPQSVHAYVLGEHGD-SEVLVWSSAQVGGVPLLEFAEARGRALSPEDRARIDEGVRRAAYRIIE---GKGATY  228 (310)
T ss_dssp             HHHHHTSCGGGEEEEEEBCSST-TCEEEEEEEEETTEEHHHHHHHTTCCCCHHHHHHHHHHHHTHHHHHHH---HHSCCC
T ss_pred             HHHHhCcCHHHeEEEEecccCC-ccccchhhccCCCEEHHHHhhhcccCCCHHHHHHHHHHHHHhhHHHHh---ccCCcH
Confidence            9999999999999999999999 9999999987632            14666789999999999999999   468999


Q ss_pred             hhHHHHHHHHHHHHHhccCCCCcEEEee-eeeccC-CCccEEEEeEEEcCCCeEEeccCCCCCHHHHHHHHHHHHHHHHH
Q 018512          267 LSMAYAAVKFADACLRGLRGDAGVVECA-FVASQV-TELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGS  344 (354)
Q Consensus       267 ~s~A~a~~~ii~si~~~~~~~~~v~~~~-~~~g~~-~~~~~~svPv~ig~~Gv~~i~~~~~L~~~E~~~l~~sa~~i~~~  344 (354)
                      |++|.++++++++|++|.+   .+++++ +++|+| .+++|+|+||++|++|+++++++ +|+++|+++|++|++.|++.
T Consensus       229 ~~~a~a~~~~~~ai~~~~~---~~~~vs~~~~G~yg~~~~~~~vP~~ig~~Gv~~i~~~-~L~~~e~~~l~~s~~~l~~~  304 (310)
T 2xxj_A          229 YGIGAGLARLVRAILTDEK---GVYTVSAFTPEVAGVLEVSLSLPRILGAGGVAGTVYP-SLSPEERAALRRSAEILKEA  304 (310)
T ss_dssp             HHHHHHHHHHHHHHHTTCC---EEEEEEEEEEEETTEEEEEEEEEEEEETTEEEEECCC-CCCHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHcCCC---CEEEEEEEEcCccCCccEEEEEEEEEeCCeeEEEcCC-CCCHHHHHHHHHHHHHHHHH
Confidence            9999999999999999965   478887 679998 46899999999999999999995 99999999999999999999


Q ss_pred             HHHh
Q 018512          345 IQKG  348 (354)
Q Consensus       345 ~~~~  348 (354)
                      +++.
T Consensus       305 ~~~~  308 (310)
T 2xxj_A          305 AFAL  308 (310)
T ss_dssp             HHHH
T ss_pred             HHHh
Confidence            8864

>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}

Probab=100.00  E-value=3e-58  Score=438.28  Aligned_cols=292  Identities=24%  Similarity=0.396  Sum_probs=264.0

Q ss_pred             eEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCC----CCCeEEEEeCCCcHHhhhCCCcEEEEc
Q 018512           44 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMD----TGAVVRGFLGQPQLENALTGMDLVIIP  117 (354)
Q Consensus        44 kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~----~~~~v~~~~~~~d~~~al~~aDvVIi~  117 (354)
                      ||+|||| |++|+++++.++..++ +||+|+|+++  +++.++|+.|..    ....+..   ++|+ ++++|||+||++
T Consensus         1 KI~IiGa-G~vG~~~a~~l~~~~l-~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~---t~d~-~a~~~aD~Vi~~   74 (308)
T 2d4a_B            1 MITILGA-GKVGMATAVMLMMRGY-DDLLLIARTPGKPQGEALDLAHAAAELGVDIRISG---SNSY-EDMRGSDIVLVT   74 (308)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHHTC-SCEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEE---ESCG-GGGTTCSEEEEC
T ss_pred             CEEEECc-CHHHHHHHHHHHhCCC-CEEEEEcCChhhHHHHHHHHHHhhhhcCCCeEEEE---CCCH-HHhCCCCEEEEe
Confidence            7999999 9999999999998888 7999999987  678889998853    1233443   3565 799999999999


Q ss_pred             CCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCCchHHHHHHHHHhCCCCCCCEEEe-ccchHHHHH
Q 018512          118 AGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRAN  196 (354)
Q Consensus       118 ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~~~~~~~~~~p~~kviG~-t~ld~~r~~  196 (354)
                      +|.|+++|++|.|++.+|++++++++++++++||++|+|++|||+|+++++    +++.+++|++||+|+ |.||+.|++
T Consensus        75 ag~~~k~G~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tNPv~~~t~~----~~k~~~~p~~rviG~gt~LD~~R~~  150 (308)
T 2d4a_B           75 AGIGRKPGMTREQLLEANANTMADLAEKIKAYAKDAIVVITTNPVDAMTYV----MYKKTGFPRERVIGFSGILDSARMA  150 (308)
T ss_dssp             CSCCCCSSCCTHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCSSHHHHHHH----HHHHHCCCGGGEEECCHHHHHHHHH
T ss_pred             CCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCCchHHHHHH----HHHhcCCChhhEEEecccchHHHHH
Confidence            999999999999999999999999999999999999999999999999765    478889999999999 999999999


Q ss_pred             HHHHHHhCCCCCCCcceEEeecCCccccccccccCCCC-----CCChHHHHHHHHHHhcchhHHHhhhccCC-cchhhHH
Q 018512          197 TFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPC-----SFTQEETEYLTNRIQNGGTEVVEAKAGAG-SATLSMA  270 (354)
Q Consensus       197 ~~la~~l~v~~~~v~~~v~G~hg~~~~vp~~s~~~v~~-----~~~~~~~~~i~~~v~~~~~~i~~~~~~kg-~~~~s~A  270 (354)
                      +++|+++|+++++|++++||+||+ +++|+||++++..     .+++++++++.++++++++++++   +|| ++.|++|
T Consensus       151 ~~la~~lgv~~~~v~~~v~G~Hg~-t~~p~~s~~~v~g~~~~~~~~~~~~~~~~~~v~~~g~eii~---~kg~s~~~~~a  226 (308)
T 2d4a_B          151 YYISQKLGVSFKSVNAIVLGMHGQ-KMFPVPRLSSVGGVPLEHLMSKEEIEEVVSETVNAGAKITE---LRGYSSNYGPA  226 (308)
T ss_dssp             HHHHHHHTSCGGGEECCEEBCSST-TCEECGGGCEETTEEHHHHSCHHHHHHHHHHHHTHHHHHHH---HHSSCCCHHHH
T ss_pred             HHHHHHhCcChhHeEEEEEeccCC-ceeeeehhccCCCEEHHHHcCHHHHHHHHHHHHHhhHhhhh---CCCCccHHHHH
Confidence            999999999999999999999999 9999999998743     15677899999999999999999   457 9999999


Q ss_pred             HHHHHHHHHHHhccCCCCcEEEee-eeeccC-CCccEEEEeEEEcCCCeEEeccCCCCCHHHHHHHHHHHHHHHHHHHHh
Q 018512          271 YAAVKFADACLRGLRGDAGVVECA-FVASQV-TELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSIQKG  348 (354)
Q Consensus       271 ~a~~~ii~si~~~~~~~~~v~~~~-~~~g~~-~~~~~~svPv~ig~~Gv~~i~~~~~L~~~E~~~l~~sa~~i~~~~~~~  348 (354)
                      .++++++++|++|++   .+++++ +++|+| .+++|+|+||++|++|+++++++ +|+++|+++|++|++.|++.++.+
T Consensus       227 ~a~~~~~~ai~~~~~---~v~~vs~~~~G~yg~~~~~~~vP~~ig~~Gv~~i~~~-~L~~~e~~~l~~s~~~l~~~~~~~  302 (308)
T 2d4a_B          227 AGLVLTVEAIKRDSK---RIYPYSLYLQGEYGYNDIVAEVPAVIGKSGIERIIEL-PLTEDEKRKFDEAVQAVKKLVETL  302 (308)
T ss_dssp             HHHHHHHHHHHTTCC---EEEEEEEEEESGGGCEEEEEEEEEEEETTEEEEECCC-CCCHHHHHHHHHHHHHHHHHHHTS
T ss_pred             HHHHHHHHHHHhCCC---cEEEEEEEEcCccCCCceEEEEEEEEcCCceEEecCC-CCCHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999975   488886 679998 57999999999999999999995 999999999999999999999988


Q ss_pred             hhhhc
Q 018512          349 ISFSK  353 (354)
Q Consensus       349 ~~~~~  353 (354)
                      .+.+.
T Consensus       303 ~~~l~  307 (308)
T 2d4a_B          303 PPQLR  307 (308)
T ss_dssp             CHHHH
T ss_pred             HHHhc
Confidence            76553

>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1

Probab=100.00  E-value=1e-59  Score=449.67  Aligned_cols=280  Identities=20%  Similarity=0.264  Sum_probs=253.4

Q ss_pred             CCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCC---CCeEEEEeCCCcHHhhhCCCcEE
Q 018512           40 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDT---GAVVRGFLGQPQLENALTGMDLV  114 (354)
Q Consensus        40 ~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~---~~~v~~~~~~~d~~~al~~aDvV  114 (354)
                      .+.+||+|||+ |.||+++++.++..+++.+|+|+|+++  ++|.++||+|...   ...+..   ++|+ ++++|||+|
T Consensus        19 ~~~~kV~ViGa-G~vG~~~a~~la~~g~~~ev~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~---t~d~-~~~~daDiV   93 (330)
T 3ldh_A           19 RSYNKITVVGC-DAVGMADAISVLMKDLADEVALVDVMEDKLKGEMMDLEHGSLFLHTAKIVS---GKDY-SVSAGSKLV   93 (330)
T ss_dssp             CCCCEEEEEST-THHHHHHHHHHHHHCCCSEEEEECSCHHHHHHHHHHHHHHGGGSCCSEEEE---ESSS-CSCSSCSEE
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhhhhcccCCeEEE---cCCH-HHhCCCCEE
Confidence            35689999999 999999999999999988999999987  6889999998632   122332   3566 569999999


Q ss_pred             EEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCCchHHHHHHHHHhCCCCCCCEEEe-ccchHH
Q 018512          115 IIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVV  193 (354)
Q Consensus       115 Ii~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~~~~~~~~~~p~~kviG~-t~ld~~  193 (354)
                      |+++|.|+++||+|.|++.+|+++++++++++.+++|++|++++|||+|++|+++    ++.++||++||||+ |.||+.
T Consensus        94 IitaG~p~kpG~tR~dll~~N~~I~k~i~~~I~k~~P~a~ilvvtNPvdi~t~~~----~k~sg~p~~rViG~gt~LDs~  169 (330)
T 3ldh_A           94 VITAGARQQEGESRLNLVQRNVNIFKFIIPNIVKHSPDCLKELHPELGTDKNKQD----WKLSGLPMHRIIGSGCNLDSA  169 (330)
T ss_dssp             EECCSCCCCSSCCTTGGGHHHHHHHHHHHHHHHHHCTTCEEEECSSSHHHHHHHH----HHHHCCCGGGEECCTTHHHHH
T ss_pred             EEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhCCCceEEeCCCccHHHHHHH----HHHhCCCHHHeecccCchhHH
Confidence            9999999999999999999999999999999999999999999999999998764    67889999999999 799999


Q ss_pred             HHHHHHHHHhCCCCCCCcceEEeecCCccccccccccCCCCCCChHHH-HHHHHHHhcchhHHHhhhccCCcchhhHHH-
Q 018512          194 RANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPCSFTQEET-EYLTNRIQNGGTEVVEAKAGAGSATLSMAY-  271 (354)
Q Consensus       194 r~~~~la~~l~v~~~~v~~~v~G~hg~~~~vp~~s~~~v~~~~~~~~~-~~i~~~v~~~~~~i~~~~~~kg~~~~s~A~-  271 (354)
                      |+++++|+++|+++++|+++|||+||+ +++|+||+          +| +++.+++++++++|++   +||+++||+|. 
T Consensus       170 R~~~~lA~~lgv~~~~V~~~V~G~Hg~-t~vp~~S~----------~~~~~~~~~v~~~g~eii~---~kg~t~~a~a~~  235 (330)
T 3ldh_A          170 RFRYLMGERLGVHSCLVIGWVIGQHGD-SVPSVWSG----------MWDAKLHKDVVDSAYEVIK---LKGYTSWAIGLV  235 (330)
T ss_dssp             HHHHHHHHHHTSCTTTCCEEECSSSST-TCCEEEEE----------EEETTEEHHHHHCCCTTST---TCHHHHHHHHHT
T ss_pred             HHHHHHHHHhCCCHHHeEEEEEcCCCC-ceeeechh----------hHHHHHHHHHHHHHHHHHH---ccCCcceeeeee
Confidence            999999999999999999999999999 99999998          23 6778889999999999   46899999999 


Q ss_pred             ----------------HHHHHHHHHHhccCCCCcEEEee-eeeccC--CCccEEEEeEEEcCCCeEE--eccCCCCCHHH
Q 018512          272 ----------------AAVKFADACLRGLRGDAGVVECA-FVASQV--TELPFFASKVRLGRQGAEE--IFQLGPLNEYE  330 (354)
Q Consensus       272 ----------------a~~~ii~si~~~~~~~~~v~~~~-~~~g~~--~~~~~~svPv~ig~~Gv~~--i~~~~~L~~~E  330 (354)
                                      ++++++++|++|.+   .++||+ +++|+|  ++++|||+||++| +|+++  ++++ +|+++|
T Consensus       236 ~~~~~~~~~~~~~~~~a~~~~~~ail~~~~---~v~~~s~~~~g~yg~~~~v~~s~P~~lg-~Gv~~~~iv~~-~L~~~E  310 (330)
T 3ldh_A          236 VSNPVDVLTYVAWKGCSVADLAQTIMKDLC---RVHPVSTMVKDFYGIKDNVFLSLPCVLN-NGISHCNIVKM-KLKPDE  310 (330)
T ss_dssp             THHHHTTSSSCSCTHHHHHHHHHHHHHTCC---EEECCBCCCSSSSSCCSCCCCBCCEEEB-TTBCTTCCCCC-CCCHHH
T ss_pred             ccCccchhhhhhhHHHHHHHHHHHHHcCCC---ceEEEEeecCCccCCCCceEEEEEEEEC-CcEEEcceecC-CCCHHH
Confidence                            99999999999865   599998 679999  4599999999999 99999  9995 999999


Q ss_pred             HHHHHHHHHHHHHHHHH
Q 018512          331 RIGLEKAKKELAGSIQK  347 (354)
Q Consensus       331 ~~~l~~sa~~i~~~~~~  347 (354)
                      +++|++|++.|++.++.
T Consensus       311 ~~~l~~s~~~l~~~~~~  327 (330)
T 3ldh_A          311 EQQLQKSATTLWDIQKD  327 (330)
T ss_dssp             HHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHHH
Confidence            99999999999988774

>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A

Probab=100.00  E-value=3e-57  Score=430.63  Aligned_cols=291  Identities=25%  Similarity=0.359  Sum_probs=260.9

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEec--CC--chhHHHHHhcCCC-CCeEEEEeCCCcHHhhhCCCcEEEEc
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDV--VN--TPGVTADISHMDT-GAVVRGFLGQPQLENALTGMDLVIIP  117 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~--~~--~~g~~~dl~~~~~-~~~v~~~~~~~d~~~al~~aDvVIi~  117 (354)
                      |||+||||+|++|++++..|+..++..|++|+|+  ++  +++.++|+.|... ...++...  ++ +++++|||+||++
T Consensus         1 mKI~IiGAaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~v~~--~~-~~a~~~aDvVi~~   77 (303)
T 1o6z_A            1 TKVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQ--GG-YEDTAGSDVVVIT   77 (303)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEE--CC-GGGGTTCSEEEEC
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEcCCCChhhHHHHHHHHHHHHhhCCCcEEEe--CC-HHHhCCCCEEEEc
Confidence            6999999779999999999999888889999999  65  4677889988632 22333332  24 6889999999999


Q ss_pred             CCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCCchHHHHHHHHHhCCCCCCCEEEe-ccchHHHHH
Q 018512          118 AGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRAN  196 (354)
Q Consensus       118 ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~~~~~~~~~~p~~kviG~-t~ld~~r~~  196 (354)
                      +|.++++|++|.|++..|+++++++++.+++++|++||+++|||+|++|++    +++.+++|++||+|+ |.||+.|++
T Consensus        78 ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~p~~~viv~SNPv~~~~~~----~~~~~~~p~~rviG~gt~Ld~~r~~  153 (303)
T 1o6z_A           78 AGIPRQPGQTRIDLAGDNAPIMEDIQSSLDEHNDDYISLTTSNPVDLLNRH----LYEAGDRSREQVIGFGGRLDSARFR  153 (303)
T ss_dssp             CCCCCCTTCCHHHHHHHHHHHHHHHHHHHHTTCSCCEEEECCSSHHHHHHH----HHHHSSSCGGGEEECCHHHHHHHHH
T ss_pred             CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEeCChHHHHHHH----HHHHcCCCHHHeeecccchhHHHHH
Confidence            999999999999999999999999999999999999999999999999764    588899999999999 999999999


Q ss_pred             HHHHHHhCCCCCCCcceEEeecCCccccccccccCCCC--CC-ChHHHHHHHHHHhcchhHHHhhhccCCcchhhHHHHH
Q 018512          197 TFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPC--SF-TQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAA  273 (354)
Q Consensus       197 ~~la~~l~v~~~~v~~~v~G~hg~~~~vp~~s~~~v~~--~~-~~~~~~~i~~~v~~~~~~i~~~~~~kg~~~~s~A~a~  273 (354)
                      +++|+++|+++++|+++||||||+ +++|+||.+.+..  .+ ++++++++.+++++++++|++   +||++.||+|.++
T Consensus       154 ~~la~~l~v~~~~v~~~v~G~HG~-~~~p~~s~~~v~g~p~~~~~~~~~~~~~~v~~~g~eii~---~kg~~~~~~a~a~  229 (303)
T 1o6z_A          154 YVLSEEFDAPVQNVEGTILGEHGD-AQVPVFSKVSVDGTDPEFSGDEKEQLLGDLQESAMDVIE---RKGATEWGPARGV  229 (303)
T ss_dssp             HHHHHHHTCCGGGEECCEEECSST-TEEECGGGCEETTBCCCCCHHHHHHHHHHHHHHHHHHHT---TTSSCCHHHHHHH
T ss_pred             HHHHHHhCcCHHHeEEEEEeCCCC-ccccCCcccccCCcCccCCHHHHHHHHHHHHHHhHHHHh---cCCChHHHHHHHH
Confidence            999999999999999999999999 9999999987521  44 778899999999999999999   5789999999999


Q ss_pred             HHHHHHHHhccCCCCcEEEee-eeeccC-CCccEEEEeEEEcCCCeEEeccCCCCCHHHHHHHHHHHHHHHHHHHHh
Q 018512          274 VKFADACLRGLRGDAGVVECA-FVASQV-TELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSIQKG  348 (354)
Q Consensus       274 ~~ii~si~~~~~~~~~v~~~~-~~~g~~-~~~~~~svPv~ig~~Gv~~i~~~~~L~~~E~~~l~~sa~~i~~~~~~~  348 (354)
                      ++++++|++|++   .+++++ +++|+| .+++|+|+||++|++|+++++++ +|+++|+++|++|++.|++.+++.
T Consensus       230 ~~~~~ai~~~~~---~~~~~~~~~~g~~g~~~~~~~~P~~ig~~Gv~~i~~~-~l~~~e~~~l~~s~~~l~~~~~~~  302 (303)
T 1o6z_A          230 AHMVEAILHDTG---EVLPASVKLEGEFGHEDTAFGVPVSLGSNGVEEIVEW-DLDDYEQDLMADAAEKLSDQYDKI  302 (303)
T ss_dssp             HHHHHHHHTTCC---CEEEEEEEEESGGGCEEEEEEEEEEEETTEEEEECCC-CCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHhCCC---CEEEEEEecCCccCCcceEEEEEEEEeCCeeEEecCC-CCCHHHHHHHHHHHHHHHHHHHhh
Confidence            999999999975   388887 679998 57899999999999999999995 999999999999999999998753

>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*

Probab=100.00  E-value=1.7e-57  Score=434.80  Aligned_cols=294  Identities=22%  Similarity=0.360  Sum_probs=260.5

Q ss_pred             CCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCC--CCeEEEEeCCCcHHhhhCCCcEEE
Q 018512           40 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDT--GAVVRGFLGQPQLENALTGMDLVI  115 (354)
Q Consensus        40 ~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~--~~~v~~~~~~~d~~~al~~aDvVI  115 (354)
                      .+++||+|||| |++|++++..|+.+++..+|+|+|+++  +++.++|+.|...  ...++...  ++ +++++|||+||
T Consensus         4 m~~~KI~IIGa-G~vG~~la~~l~~~~~~~ei~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~--~~-~~a~~~aDvVv   79 (317)
T 3d0o_A            4 FKGNKVVLIGN-GAVGSSYAFSLVNQSIVDELVIIDLDTEKVRGDVMDLKHATPYSPTTVRVKA--GE-YSDCHDADLVV   79 (317)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHHHCSCSEEEEECSCHHHHHHHHHHHHHHGGGSSSCCEEEE--CC-GGGGTTCSEEE
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHhhhhhhhHHhhhhhcCCCeEEEe--CC-HHHhCCCCEEE
Confidence            35679999999 999999999999888888999999987  5778889888531  12334332  34 68899999999


Q ss_pred             EcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCCchHHHHHHHHHhCCCCCCCEEEe-ccchHHH
Q 018512          116 IPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVR  194 (354)
Q Consensus       116 i~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~~~~~~~~~~p~~kviG~-t~ld~~r  194 (354)
                      +++|.|+++|++|.|++.+|+++++++++.|.++||++|++++|||+|++|++    +++.+++|++||||+ |.||+.|
T Consensus        80 i~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~~----~~k~~~~p~~rviG~gt~lD~~r  155 (317)
T 3d0o_A           80 ICAGAAQKPGETRLDLVSKNLKIFKSIVGEVMASKFDGIFLVATNPVDILAYA----TWKFSGLPKERVIGSGTILDSAR  155 (317)
T ss_dssp             ECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHTTCCSEEEECSSSHHHHHHH----HHHHHCCCGGGEEECTTHHHHHH
T ss_pred             ECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEecCcHHHHHHH----HHHHhCCCHHHEEecCccccHHH
Confidence            99999999999999999999999999999999999999999999999999764    578889999999999 9999999


Q ss_pred             HHHHHHHHhCCCCCCCcceEEeecCCccccccccccCCCC----------CCChHHHHHHHHHHhcchhHHHhhhccCCc
Q 018512          195 ANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPC----------SFTQEETEYLTNRIQNGGTEVVEAKAGAGS  264 (354)
Q Consensus       195 ~~~~la~~l~v~~~~v~~~v~G~hg~~~~vp~~s~~~v~~----------~~~~~~~~~i~~~v~~~~~~i~~~~~~kg~  264 (354)
                      +++++|+++|+++++|+++|||+||+ +++|+||++++..          .++++.++++.++++++++++++   +||+
T Consensus       156 ~~~~la~~l~v~~~~v~~~v~G~HG~-t~~p~~s~~~v~g~~~~~~~~~~~~~~~~~~~~~~~v~~~g~eii~---~kg~  231 (317)
T 3d0o_A          156 FRLLLSEAFDVAPRSVDAQIIGEHGD-TELPVWSHANIAGQPLKTLLEQRPEGKAQIEQIFVQTRDAAYDIIQ---AKGA  231 (317)
T ss_dssp             HHHHHHHHHTSCGGGCBCCEEBCSST-TCEECTTTCEETTEEHHHHHHTSTTHHHHHHHHHHHHHTHHHHHHH---HHSC
T ss_pred             HHHHHHHHhCcChhhEEEEEEecCCC-CeeEeeeccccCCEEHHHHhhccCCCHHHHHHHHHHHHhhhhEEEe---CCCC
Confidence            99999999999999999999999999 9999999988642          14455678999999999999999   4689


Q ss_pred             chhhHHHHHHHHHHHHHhccCCCCcEEEee-eeeccC-CCccEEEEeEEEcCCCeEEeccCCCCCHHHHHHHHHHHHHHH
Q 018512          265 ATLSMAYAAVKFADACLRGLRGDAGVVECA-FVASQV-TELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELA  342 (354)
Q Consensus       265 ~~~s~A~a~~~ii~si~~~~~~~~~v~~~~-~~~g~~-~~~~~~svPv~ig~~Gv~~i~~~~~L~~~E~~~l~~sa~~i~  342 (354)
                      +.|++|.++++++++|++|.+   .+++++ +++|+| .+++|+|+||++|++|+++++++ +|+++|+++|++|++.|+
T Consensus       232 ~~~~~a~a~~~~~~ai~~~~~---~~~~~~~~~~g~~g~~~~~~~vP~~ig~~Gv~~i~~~-~l~~~e~~~l~~s~~~l~  307 (317)
T 3d0o_A          232 TYYGVAMGLARITEAIFRNED---AVLTVSALLEGEYEEEDVYIGVPAVINRNGIRNVVEI-PLNDEEQSKFAHSAKTLK  307 (317)
T ss_dssp             CCHHHHHHHHHHHHHHHTTCC---EEEEEEEEEESGGGCEEEEEEEEEEEETTEEEEECCC-CCCHHHHHHHHHHHHHHH
T ss_pred             chHhHHHHHHHHHHHHHcCCC---cEEEEEEeecCccCCCceEEEEEEEEeCCeeEEEecC-CCCHHHHHHHHHHHHHHH
Confidence            999999999999999999965   478887 679998 44999999999999999999995 999999999999999999


Q ss_pred             HHHHHhh
Q 018512          343 GSIQKGI  349 (354)
Q Consensus       343 ~~~~~~~  349 (354)
                      +.++...
T Consensus       308 ~~~~~~~  314 (317)
T 3d0o_A          308 DIMAEAE  314 (317)
T ss_dssp             HHHHC--
T ss_pred             HHHHHHH
Confidence            9998664

>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1

Probab=100.00  E-value=3e-57  Score=433.29  Aligned_cols=293  Identities=24%  Similarity=0.358  Sum_probs=253.3

Q ss_pred             CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCC-CCeEEEEeCCCcHHhhhCCCcEEEEc
Q 018512           41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDT-GAVVRGFLGQPQLENALTGMDLVIIP  117 (354)
Q Consensus        41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~-~~~v~~~~~~~d~~~al~~aDvVIi~  117 (354)
                      +++||+|||| |+||++++..|+..++.++|+|+|+++  +++.++|+.|... ...++..  .++ +++++|||+||++
T Consensus         6 ~~~KI~IiGa-G~vG~~~a~~l~~~~~~~ev~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~--~~~-~~a~~~aDvVii~   81 (318)
T 1y6j_A            6 SRSKVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLY--AGD-YSDVKDCDVIVVT   81 (318)
T ss_dssp             -CCCEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC----C-GGGGTTCSEEEEC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHhHHhcCCeEEE--ECC-HHHhCCCCEEEEc
Confidence            4579999999 999999999999999889999999987  6788999999752 2344443  235 5889999999999


Q ss_pred             CCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCCchHHHHHHHHHhCCCCCCCEEEe-ccchHHHHH
Q 018512          118 AGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRAN  196 (354)
Q Consensus       118 ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~~~~~~~~~~p~~kviG~-t~ld~~r~~  196 (354)
                      +|.|+++|++|.|++.+|+++++++++.|.+++|++|++++|||+|++|++    +++.+++|++||||+ |.||+.|++
T Consensus        82 ~g~p~k~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~tNPv~~~~~~----~~k~s~~p~~rviG~gt~Ld~~r~~  157 (318)
T 1y6j_A           82 AGANRKPGETRLDLAKKNVMIAKEVTQNIMKYYNHGVILVVSNPVDIITYM----IQKWSGLPVGKVIGSGTVLDSIRFR  157 (318)
T ss_dssp             CCC------CHHHHHHHHHHHHHHHHHHHHHHCCSCEEEECSSSHHHHHHH----HHHHHTCCTTTEEECTTHHHHHHHH
T ss_pred             CCCCCCCCcCHHHHHHhhHHHHHHHHHHHHHhCCCcEEEEecCcHHHHHHH----HHHHcCCCHHHEeccCCchHHHHHH
Confidence            999999999999999999999999999999999999999999999999865    478889999999999 999999999


Q ss_pred             HHHHHHhCCCCCCCcceEEeecCCccccccccccCCCC----C--------CChHHHHHHHHHHhcchhHHHhhhccCCc
Q 018512          197 TFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPC----S--------FTQEETEYLTNRIQNGGTEVVEAKAGAGS  264 (354)
Q Consensus       197 ~~la~~l~v~~~~v~~~v~G~hg~~~~vp~~s~~~v~~----~--------~~~~~~~~i~~~v~~~~~~i~~~~~~kg~  264 (354)
                      +++|+++|+++++|+++||||||+ +++|+||++++..    .        +.++.++++.++++++++++++   +||+
T Consensus       158 ~~la~~lgv~~~~v~~~v~G~HG~-t~~p~~s~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~eii~---~kg~  233 (318)
T 1y6j_A          158 YLLSEKLGVDVKNVHGYIIGEHGD-SQLPLWSCTHIAGKNINEYIDDPKCNFTEEDKKKIAEDVKTAGATIIK---NKGA  233 (318)
T ss_dssp             HHHHTTTTCCTTTEECCEEBCSSS-SCEECCTTCEETTBCSCCC-----------CCHHHHHHHHHHHHHHHH---HTSC
T ss_pred             HHHHHHhCCCHHHeEEEEecccCC-cEeeeehhceECCEEHHHHhhhhcccCCHHHHHHHHHHHHHhhHhHhh---CCCc
Confidence            999999999999999999999999 9999999987531    1        1234468999999999999999   5689


Q ss_pred             chhhHHHHHHHHHHHHHhccCCCCcEEEee-eeeccC-CCccEEEEeEEEcCCCeEEeccCCCCCHHHHHHHHHHHHHHH
Q 018512          265 ATLSMAYAAVKFADACLRGLRGDAGVVECA-FVASQV-TELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELA  342 (354)
Q Consensus       265 ~~~s~A~a~~~ii~si~~~~~~~~~v~~~~-~~~g~~-~~~~~~svPv~ig~~Gv~~i~~~~~L~~~E~~~l~~sa~~i~  342 (354)
                      ++|++|.++++++++|++|++   .+++++ +++|+| .+++|+|+||++|++|+++++++ +|+++|+++|++|++.|+
T Consensus       234 t~~~~a~a~~~~~~ai~~~~~---~~~~~~~~~~G~yg~~~~~~~vP~~ig~~Gv~~i~~~-~L~~~e~~~l~~s~~~l~  309 (318)
T 1y6j_A          234 TYYGIAVSINTIVETLLKNQN---TIRTVGTVINGMYGIEDVAISLPSIVNSEGVQEVLQF-NLTPEEEEALRFSAEQVK  309 (318)
T ss_dssp             CCHHHHHHHHHHHHHHHHTCC---CEECCEEEECSBTTBCSEEEECCEEEETTEEEECCCC-CCCHHHHHHHHHHHHHHH
T ss_pred             cHHHHHHHHHHHHHHHHcCCC---cEEEEEEeecCccCCcceEEEEEEEEcCCeeEEEecC-CCCHHHHHHHHHHHHHHH
Confidence            999999999999999999965   378887 679998 57999999999999999999995 999999999999999999


Q ss_pred             HHHHHhh
Q 018512          343 GSIQKGI  349 (354)
Q Consensus       343 ~~~~~~~  349 (354)
                      +.++.+.
T Consensus       310 ~~~~~~~  316 (318)
T 1y6j_A          310 KVLNEVK  316 (318)
T ss_dssp             HHHHHCC
T ss_pred             HHHHHHh
Confidence            9998764

>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*

Probab=100.00  E-value=2.5e-56  Score=425.45  Aligned_cols=291  Identities=28%  Similarity=0.456  Sum_probs=254.6

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCC----CCCeEEEEeCCCcHHhhhCCCcEEEE
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMD----TGAVVRGFLGQPQLENALTGMDLVII  116 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~----~~~~v~~~~~~~d~~~al~~aDvVIi  116 (354)
                      |||+|||| |+||++++..|+..++. +|+|+|+++  +++.++|+.|..    ....+..   ++|+ ++++|||+||+
T Consensus         3 ~kI~VIGa-G~vG~~~a~~la~~g~~-~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~---t~d~-~a~~~aD~Vi~   76 (309)
T 1ur5_A            3 KKISIIGA-GFVGSTTAHWLAAKELG-DIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTG---TNNY-ADTANSDVIVV   76 (309)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCS-EEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEE---ESCG-GGGTTCSEEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCC-eEEEEeCCccHHHHHHHhHHHhHhhcCCCeEEEE---CCCH-HHHCCCCEEEE
Confidence            69999999 99999999999999876 499999987  577888999863    1233443   3566 88999999999


Q ss_pred             cCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCCchHHHHHHHHHhCCCCCCCEEEe-ccchHHHH
Q 018512          117 PAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRA  195 (354)
Q Consensus       117 ~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~~~~~~~~~~p~~kviG~-t~ld~~r~  195 (354)
                      ++|.|+++|++|.|++.+|+++++++++.+++++|++|++++|||+|+++++    +++.+++|++||+|+ |.||+.|+
T Consensus        77 a~g~p~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~vi~~tNPv~~~t~~----~~~~~~~~~~rviG~gt~LD~~r~  152 (309)
T 1ur5_A           77 TSGAPRKPGMSREDLIKVNADITRACISQAAPLSPNAVIIMVNNPLDAMTYL----AAEVSGFPKERVIGQAGVLDAARY  152 (309)
T ss_dssp             CCCC--------CHHHHHHHHHHHHHHHHHGGGCTTCEEEECCSSHHHHHHH----HHHHHCCCGGGEEECCHHHHHHHH
T ss_pred             cCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEcCCchHHHHHH----HHHHcCCCHHHEEECCcchHHHHH
Confidence            9999999999999999999999999999999999999999999999999765    477889999999999 99999999


Q ss_pred             HHHHHHHhCCCCCCCcceEEeecCCccccccccccCCCC-----CCChHHHHHHHHHHhcchhHHHhhhccCCcchhhHH
Q 018512          196 NTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPC-----SFTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMA  270 (354)
Q Consensus       196 ~~~la~~l~v~~~~v~~~v~G~hg~~~~vp~~s~~~v~~-----~~~~~~~~~i~~~v~~~~~~i~~~~~~kg~~~~s~A  270 (354)
                      ++++|+++|+++++|+++|||+||+ +++|+||++++..     .+++++++++.+++++++++|++. .+||++.|++|
T Consensus       153 ~~~la~~lgv~~~~v~~~v~G~Hg~-t~~p~~s~~~v~g~~~~~~~~~~~~~~~~~~v~~~g~eii~~-~~kgs~~~~~a  230 (309)
T 1ur5_A          153 RTFIAMEAGVSVEDVQAMLMGGHGD-EMVPLPRFSCISGIPVSEFIAPDRLAQIVERTRKGGGEIVNL-LKTGSAYYAPA  230 (309)
T ss_dssp             HHHHHHHHTCCGGGEEECCEECSGG-GEECCGGGEEETTEEGGGTSCHHHHHHHHHHHHTHHHHHHHH-HSSCCCCHHHH
T ss_pred             HHHHHHHhCCChhheeEEEecCcCC-ceeeeeecceeCCEeHHHHcCHhHHHHHHHHHHhhhHHhhhh-ccCCCcHHHHH
Confidence            9999999999999999999999999 9999999988642     257778999999999999999996 35789999999


Q ss_pred             HHHHHHHHHHHhccCCCCcEEEee-eeeccC-CCccEEEEeEEEcCCCeEEeccCCCCCHHHHHHHHHHHHHHHHHHHHh
Q 018512          271 YAAVKFADACLRGLRGDAGVVECA-FVASQV-TELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSIQKG  348 (354)
Q Consensus       271 ~a~~~ii~si~~~~~~~~~v~~~~-~~~g~~-~~~~~~svPv~ig~~Gv~~i~~~~~L~~~E~~~l~~sa~~i~~~~~~~  348 (354)
                      .++++++++|++|++   .+++++ +++|+| .+++|+|+||++|++|+++++++ +|+++|+++|++|++.|++.+++.
T Consensus       231 ~a~~~~~~ai~~~~~---~~~~~~~~~~g~~g~~~~~~~vP~~ig~~Gv~~i~~~-~l~~~e~~~l~~s~~~l~~~~~~~  306 (309)
T 1ur5_A          231 AATAQMVEAVLKDKK---RVMPVAAYLTGQYGLNDIYFGVPVILGAGGVEKILEL-PLNEEEMALLNASAKAVRATLDTL  306 (309)
T ss_dssp             HHHHHHHHHHHTTCC---EEEEEEEEEESGGGCEEEEEEEEEEEETTEEEEECCC-CCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHcCCC---cEEEEEEEecCccCCcceEEEEEEEEeCCceEEecCC-CCCHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999875   488886 679998 57999999999999999999995 999999999999999999999876


Q ss_pred             h
Q 018512          349 I  349 (354)
Q Consensus       349 ~  349 (354)
                      .
T Consensus       307 ~  307 (309)
T 1ur5_A          307 K  307 (309)
T ss_dssp             C
T ss_pred             h
Confidence            4

>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*

Probab=100.00  E-value=2.3e-56  Score=426.44  Aligned_cols=294  Identities=24%  Similarity=0.407  Sum_probs=255.2

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEec--CC--chhHHHHHhcCCC-C-CeEEEEeCCCcHHhhhCCCcEEEE
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDV--VN--TPGVTADISHMDT-G-AVVRGFLGQPQLENALTGMDLVII  116 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~--~~--~~g~~~dl~~~~~-~-~~v~~~~~~~d~~~al~~aDvVIi  116 (354)
                      |||+||||+|++|+++++.|+.+++..+++|+|+  ++  +++.++|+.|... . ..++....+++++++++|||+||+
T Consensus         1 mKI~V~GaaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~~i~~~~d~l~~al~gaD~Vi~   80 (313)
T 1hye_A            1 MKVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVESDENLRIIDESDVVII   80 (313)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEETTCGGGGTTCSEEEE
T ss_pred             CEEEEECCCChhHHHHHHHHHhCCCCCEEEEEcCCCchhhhHHHHHHHHHhHHhcCCCeEEEeCCcchHHHhCCCCEEEE
Confidence            6999999999999999999999888889999999  65  5677889987531 1 223332211225789999999999


Q ss_pred             cCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCCchHHHHHHHHHhCCCCCCCEEEe-ccchHHHH
Q 018512          117 PAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRA  195 (354)
Q Consensus       117 ~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~~~~~~~~~~p~~kviG~-t~ld~~r~  195 (354)
                      +||.++++|++|.|++.+|+++++++++.+++++ ++||+++|||+|++|+++    ++.+++|++|++|+ |.||+.|+
T Consensus        81 ~Ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~-~~~vlv~SNPv~~~t~~~----~k~~~~p~~rviG~gt~LD~~r~  155 (313)
T 1hye_A           81 TSGVPRKEGMSRMDLAKTNAKIVGKYAKKIAEIC-DTKIFVITNPVDVMTYKA----LVDSKFERNQVFGLGTHLDSLRF  155 (313)
T ss_dssp             CCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHC-CCEEEECSSSHHHHHHHH----HHHHCCCTTSEEECTTHHHHHHH
T ss_pred             CCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhC-CeEEEEecCcHHHHHHHH----HHhhCcChhcEEEeCccHHHHHH
Confidence            9999999999999999999999999999999999 999999999999998654    77789999999999 99999999


Q ss_pred             HHHHHHHhCCCCCCCcceEEeecCCccccccccccCCCC----C---CChHHHHHHHHHHhcchhHHHhhhccCCcchhh
Q 018512          196 NTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPC----S---FTQEETEYLTNRIQNGGTEVVEAKAGAGSATLS  268 (354)
Q Consensus       196 ~~~la~~l~v~~~~v~~~v~G~hg~~~~vp~~s~~~v~~----~---~~~~~~~~i~~~v~~~~~~i~~~~~~kg~~~~s  268 (354)
                      ++++|+++|+++++|++++||+||+ +++|+||++.+..    .   ++++.++++.+++++++++|++   +||++.|+
T Consensus       156 ~~~la~~lgv~~~~v~~~v~G~Hg~-~~~p~~s~~~v~g~~~~~~~~~~~~~~~~~~~~v~~~g~eii~---~kgs~~~~  231 (313)
T 1hye_A          156 KVAIAKFFGVHIDEVRTRIIGEHGD-SMVPLLSATSIGGIPIQKFERFKELPIDEIIEDVKTKGEQIIR---LKGGSEFG  231 (313)
T ss_dssp             HHHHHHHHTCCGGGEECCEEECSST-TEEECGGGCEETTEEGGGCGGGGGCCHHHHHHHHHHHTTSCCC---------CC
T ss_pred             HHHHHHHhCcCHHHeEEEEeeccCC-cccceeeccccCCEEHHHHhcCCHHHHHHHHHHHHhccceeec---CCCCcHHH
Confidence            9999999999999999999999999 9999999988642    2   2566689999999999999998   57899999


Q ss_pred             HHHHHHHHHHHHHhccCCCCcEEEee-eeeccC--CCccEEEEeEEEcCCCeEEeccCCCCCHHHHHHHHHHHHHHHHHH
Q 018512          269 MAYAAVKFADACLRGLRGDAGVVECA-FVASQV--TELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSI  345 (354)
Q Consensus       269 ~A~a~~~ii~si~~~~~~~~~v~~~~-~~~g~~--~~~~~~svPv~ig~~Gv~~i~~~~~L~~~E~~~l~~sa~~i~~~~  345 (354)
                      +|.++++++++|++|++   .+++++ +++|+|  .+++|+|+||++|++|+++++++ +|+++|+++|++|++.|++.+
T Consensus       232 ~a~a~~~~~~ai~~~~~---~~~~~~~~~~g~~~g~~~~~~~~P~~ig~~Gv~~i~~~-~l~~~e~~~l~~s~~~l~~~~  307 (313)
T 1hye_A          232 PAAAILNVVRCIVNNEK---RLLTLSAYVDGEFDGIRDVCIGVPVKIGRDGIEEVVSI-ELDKDEIIAFRKSAEIIKKYC  307 (313)
T ss_dssp             HHHHHHHHHHHHHTTCC---EEEEEEEEEESSSSSCEEEEEEEEEEEETTEEEEECCC-CCCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHcCCC---eEEEEEEeecceecCccceEEEEEEEEeCCeeEEecCC-CCCHHHHHHHHHHHHHHHHHH
Confidence            99999999999999975   478887 679998  35999999999999999999995 999999999999999999999


Q ss_pred             HHhh
Q 018512          346 QKGI  349 (354)
Q Consensus       346 ~~~~  349 (354)
                      ++..
T Consensus       308 ~~~~  311 (313)
T 1hye_A          308 EEVK  311 (313)
T ss_dssp             HHHT
T ss_pred             HHHh
Confidence            8764

>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*

Probab=100.00  E-value=2.3e-56  Score=426.90  Aligned_cols=293  Identities=21%  Similarity=0.338  Sum_probs=260.8

Q ss_pred             CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCC--CCeEEEEeCCCcHHhhhCCCcEEEE
Q 018512           41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDT--GAVVRGFLGQPQLENALTGMDLVII  116 (354)
Q Consensus        41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~--~~~v~~~~~~~d~~~al~~aDvVIi  116 (354)
                      +++||+|||+ |.+|+++++.|+..++..+|+|+|+++  +++.++|+.|...  ...++...  ++ +++++|||+||+
T Consensus         5 ~~~kI~IIGa-G~vG~sla~~l~~~~~~~ev~l~Di~~~~~~~~~~dl~~~~~~~~~~~~i~~--~~-~~al~~aDvVii   80 (316)
T 1ldn_A            5 GGARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWH--GD-YDDCRDADLVVI   80 (316)
T ss_dssp             TSCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEE--CC-GGGTTTCSEEEE
T ss_pred             CCCEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEeCCcchHHHHHhhHHHHhhhcCCCeEEEc--Cc-HHHhCCCCEEEE
Confidence            3579999999 999999999999888888999999987  5777889988532  12344432  34 588999999999


Q ss_pred             cCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCCchHHHHHHHHHhCCCCCCCEEEe-ccchHHHH
Q 018512          117 PAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRA  195 (354)
Q Consensus       117 ~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~~~~~~~~~~p~~kviG~-t~ld~~r~  195 (354)
                      +++.++++|++|.|++.+|.++++++++.+++++|++|++++|||+|++|++    +++.+++|++||||+ |.||+.|+
T Consensus        81 a~~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~~iv~tNPv~~~~~~----~~~~s~~p~~rviG~gt~lD~~r~  156 (316)
T 1ldn_A           81 CAGANQKPGETRLDLVDKNIAIFRSIVESVMASGFQGLFLVATNPVDILTYA----TWKFSGLPHERVIGSGTILDTARF  156 (316)
T ss_dssp             CCSCCCCTTTCSGGGHHHHHHHHHHHHHHHHHHTCCSEEEECSSSHHHHHHH----HHHHHTCCGGGEEECTTHHHHHHH
T ss_pred             cCCCCCCCCCCHHHHHHcChHHHHHHHHHHHHHCCCCEEEEeCCchHHHHHH----HHHHhCCCHHHEEecccchHHHHH
Confidence            9999999999999999999999999999999999999999999999999865    478889999999999 99999999


Q ss_pred             HHHHHHHhCCCCCCCcceEEeecCCccccccccccCCCC----C-------CChHHHHHHHHHHhcchhHHHhhhccCCc
Q 018512          196 NTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPC----S-------FTQEETEYLTNRIQNGGTEVVEAKAGAGS  264 (354)
Q Consensus       196 ~~~la~~l~v~~~~v~~~v~G~hg~~~~vp~~s~~~v~~----~-------~~~~~~~~i~~~v~~~~~~i~~~~~~kg~  264 (354)
                      ++++|+++|+++++|+++|||+||+ +++|+||++++..    .       +.+++++++.+++++++++|++   +||+
T Consensus       157 ~~~la~~l~v~~~~v~~~v~G~HG~-~~~p~~s~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~eii~---~kg~  232 (316)
T 1ldn_A          157 RFLLGEYFSVAPQNVHAYIIGEHGD-TELPVWSQAYIGVMPIRKLVESKGEEAQKDLERIFVNVRDAAYQIIE---KKGA  232 (316)
T ss_dssp             HHHHHHHHTSCGGGEEEEEEBCSST-TCEEEEEEEEETTEESTTTSGGGTTTHHHHHHHHHHHHHHHHHHHHH---HHSC
T ss_pred             HHHHHHHhCCCHHHeEEEEecccCC-ceeeeehhccCCCEEHHHHhhccccCCHHHHHHHHHHHHHhHHHHHh---ccCC
Confidence            9999999999999999999999999 9999999987531    1       3455678999999999999999   4689


Q ss_pred             chhhHHHHHHHHHHHHHhccCCCCcEEEee-eeeccC-CCccEEEEeEEEcCCCeEEeccCCCCCHHHHHHHHHHHHHHH
Q 018512          265 ATLSMAYAAVKFADACLRGLRGDAGVVECA-FVASQV-TELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELA  342 (354)
Q Consensus       265 ~~~s~A~a~~~ii~si~~~~~~~~~v~~~~-~~~g~~-~~~~~~svPv~ig~~Gv~~i~~~~~L~~~E~~~l~~sa~~i~  342 (354)
                      +.|++|.++++++++|++|++   .+++++ +++|+| .+++|+|+||++|++|+++++++ +|+++|+++|++|++.|+
T Consensus       233 ~~~~~a~a~~~~~~ai~~~~~---~~~~~~~~~~g~yg~~~~~~~vP~~ig~~Gv~~i~~~-~l~~~e~~~l~~s~~~l~  308 (316)
T 1ldn_A          233 TYYGIAMGLARVTRAILHNEN---AILTVSAYLDGLYGERDVYIGVPAVINRNGIREVIEI-ELNDDEKNRFHHSAATLK  308 (316)
T ss_dssp             CCHHHHHHHHHHHHHHHTTCC---EEEEEEEEEESTTSCEEEEEEEEEEEETTEEEEECCC-CCCHHHHHHHHHHHHHHH
T ss_pred             cHHHHHHHHHHHHHHHHhCCC---cEEEEEEEecCccCCcceEEEEEEEEeCCeeEEEccC-CCCHHHHHHHHHHHHHHH
Confidence            999999999999999999865   478887 679998 57999999999999999999995 999999999999999999


Q ss_pred             HHHHHhh
Q 018512          343 GSIQKGI  349 (354)
Q Consensus       343 ~~~~~~~  349 (354)
                      +.+++.+
T Consensus       309 ~~~~~~~  315 (316)
T 1ldn_A          309 SVLARAF  315 (316)
T ss_dssp             HHHHHSC
T ss_pred             HHHHHHh
Confidence            9998764

>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A

Probab=100.00  E-value=3.9e-56  Score=422.38  Aligned_cols=285  Identities=17%  Similarity=0.240  Sum_probs=246.1

Q ss_pred             CCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC-chhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcC
Q 018512           40 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN-TPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA  118 (354)
Q Consensus        40 ~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~-~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~a  118 (354)
                      .+++||+|||| |+||+++++.++..++.++|+|+|+++ +.+.++|+.|... +.++.   ++|+ ++++|||+||+++
T Consensus        12 ~~~~kV~ViGa-G~vG~~~a~~l~~~g~~~ev~L~Di~~~~~g~a~dl~~~~~-~~i~~---t~d~-~~l~~aD~Vi~aa   85 (303)
T 2i6t_A           12 KTVNKITVVGG-GELGIACTLAISAKGIADRLVLLDLSEGTKGATMDLEIFNL-PNVEI---SKDL-SASAHSKVVIFTV   85 (303)
T ss_dssp             --CCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECCC-----CHHHHHHHTC-TTEEE---ESCG-GGGTTCSEEEECC
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEcCCcchHHHHHHHhhhcC-CCeEE---eCCH-HHHCCCCEEEEcC
Confidence            34579999999 999999999999999889999999987 6777889988543 45554   2576 8899999999999


Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCCchHHHHHHHHHhCCCCCCCEEEe-ccchHHHHHH
Q 018512          119 GVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRANT  197 (354)
Q Consensus       119 g~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~~~~~~~~~~p~~kviG~-t~ld~~r~~~  197 (354)
                      |.+ ++||+|+|++.+|++++++++++++++||++|+|++|||+|++|++    +++.+++|++||+|+ |.||+.|+++
T Consensus        86 g~~-~pG~tR~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~sNP~~~~t~~----~~~~~~~p~~rviG~gt~Ld~~R~~~  160 (303)
T 2i6t_A           86 NSL-GSSQSYLDVVQSNVDMFRALVPALGHYSQHSVLLVASQPVEIMTYV----TWKLSTFPANRVIGIGCNLDSQRLQY  160 (303)
T ss_dssp             CC-----CCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEECSSSHHHHHHH----HHHHHCCCGGGEEECTTHHHHHHHHH
T ss_pred             CCC-CCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEcCChHHHHHHH----HHHhcCCCHHHeeCCCCCchHHHHHH
Confidence            996 7999999999999999999999999999999999999999988754    578899999999999 9999999999


Q ss_pred             HHHHHhCCCCCCCcceEEeecCCccccccccccCCCCCCChHHHHHHHHHHhcchhHHHhhhccCCcchhhHHHHHHHHH
Q 018512          198 FVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFA  277 (354)
Q Consensus       198 ~la~~l~v~~~~v~~~v~G~hg~~~~vp~~s~~~v~~~~~~~~~~~i~~~v~~~~~~i~~~~~~kg~~~~s~A~a~~~ii  277 (354)
                      ++|+++|+++++|+++|||+||+ +++|+||...   .+.   .+++.+++++++++|++   +||++.||+|.++++++
T Consensus       161 ~la~~lgv~~~~v~~~v~G~Hg~-s~~p~~s~~~---~~~---~~~~~~~~~~~g~eii~---~kGst~~~~a~a~~~i~  230 (303)
T 2i6t_A          161 IITNVLKAQTSGKEVWVIGEQGE-DKVLTWSGQE---EVV---SHTSQVQLSNRAMELLR---VKGQRSWSVGLSVADMV  230 (303)
T ss_dssp             HHHHTSCCTTGGGGEEEEBSCSS-SCEEEEBCSS---CCC---CHHHHHHHHHHHHTTSS---SCCCCHHHHHHHHHHHH
T ss_pred             HHHHHcCCChHHeEEEEecCCCC-Cccccccccc---ccc---HHHHHHHHHHHHHHHHH---ccCchHHhHHHHHHHHH
Confidence            99999999999999999999999 9999999963   121   24567778889999988   67899999999999999


Q ss_pred             HHHHhccCCCCcEEEee-eeeccC--CCccEEEEeEEEcCCCeEEeccCCCCCHHHHHHHHHHHHHHHHHHHHh
Q 018512          278 DACLRGLRGDAGVVECA-FVASQV--TELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSIQKG  348 (354)
Q Consensus       278 ~si~~~~~~~~~v~~~~-~~~g~~--~~~~~~svPv~ig~~Gv~~i~~~~~L~~~E~~~l~~sa~~i~~~~~~~  348 (354)
                      ++|++|++   .+++++ +++|+|  ++++|+|+||++|++|+++++++++|+++|+++|++|++.|++.++..
T Consensus       231 ~ai~~~~~---~~~~vs~~~~g~yg~~~~~~~~vP~~ig~~Gv~~i~~~~~l~~~e~~~l~~s~~~l~~~~~~~  301 (303)
T 2i6t_A          231 DSIVNNKK---KVHSVSALAKGYYDINSEVFLSLPCILGTNGVSEVIKTTLKEDTVTEKLQSSASSIHSLQQQL  301 (303)
T ss_dssp             HHHHTTCC---EEEEEEEECTTSTTCCSCCEEEEEEEEETTEEEEECCBCC-CCHHHHHHHHHHHHHHHHHHHC
T ss_pred             HHHHcCCC---cEEEEEEEeCCccCCCCCeEEEEEEEEECCccEEecCCCCCCHHHHHHHHHHHHHHHHHHHHh
Confidence            99999986   478887 679998  579999999999999999998866899999999999999999998764

>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*

Probab=100.00  E-value=2.2e-54  Score=413.99  Aligned_cols=291  Identities=29%  Similarity=0.466  Sum_probs=259.3

Q ss_pred             CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCC----CCCeEEEEeCCCcHHhhhCCCcEE
Q 018512           41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMD----TGAVVRGFLGQPQLENALTGMDLV  114 (354)
Q Consensus        41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~----~~~~v~~~~~~~d~~~al~~aDvV  114 (354)
                      +++||+|||| |++|++++..|+..++. +|+|+|+++  +++.+.|+.+..    ....++.   ++|+ ++++|||+|
T Consensus         3 ~~~kI~VIGa-G~vG~~ia~~la~~g~~-~v~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~---t~d~-~al~~aD~V   76 (322)
T 1t2d_A            3 PKAKIVLVGS-GMIGGVMATLIVQKNLG-DVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSG---SNTY-DDLAGADVV   76 (322)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCC-EEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEE---ECCG-GGGTTCSEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCC-eEEEEeCCHHHHHHHHHHHHhhhhhcCCCcEEEE---CCCH-HHhCCCCEE
Confidence            3579999999 99999999999999986 499999988  567788888752    1233443   3576 889999999


Q ss_pred             EEcCCCCCCCCCC-----HHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCCchHHHHHHHHHhCCCCCCCEEEe-c
Q 018512          115 IIPAGVPRKPGMT-----RDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-T  188 (354)
Q Consensus       115 Ii~ag~~~~~g~~-----r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~~~~~~~~~~p~~kviG~-t  188 (354)
                      |+++|.|+++|++     |.|++.+|+++++++++.|+++||++|+|++|||++++++++    ++.++||++||+|+ |
T Consensus        77 i~a~g~p~k~g~~~qe~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tNP~~~~t~~~----~~~~g~~~~rviG~gt  152 (322)
T 1t2d_A           77 IVTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKNCPNAFIIVVTNPVDVMVQLL----HQHSGVPKNKIIGLGG  152 (322)
T ss_dssp             EECCSCSSCTTCCSTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECSSSHHHHHHHH----HHHHCCCGGGEEECCH
T ss_pred             EEeCCCCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCChHHHHHHH----HHhcCCChHHEEeccC
Confidence            9999999999999     999999999999999999999999999999999999997654    67789999999999 6


Q ss_pred             cchHHHHHHHHHHHhCCCCCCCcceEEeecCCccccccccccCCCC----------CCChHHHHHHHHHHhcchhHHHhh
Q 018512          189 MLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPC----------SFTQEETEYLTNRIQNGGTEVVEA  258 (354)
Q Consensus       189 ~ld~~r~~~~la~~l~v~~~~v~~~v~G~hg~~~~vp~~s~~~v~~----------~~~~~~~~~i~~~v~~~~~~i~~~  258 (354)
                      .||+.|+++++|+++|+++++|+++|||+||+ +++|+||.+.+..          .+++++++++.+++++++++|++.
T Consensus       153 ~ld~~R~~~~la~~lgv~~~~v~~~v~G~HG~-~~~p~~s~~~v~g~~~~~~~~~~~~~~~~~~~~~~~v~~~g~eii~~  231 (322)
T 1t2d_A          153 VLDTSRLKYYISQKLNVCPRDVNAHIVGAHGN-KMVLLKRYITVGGIPLQEFINNKLISDAELEAIFDRTVNTALEIVNL  231 (322)
T ss_dssp             HHHHHHHHHHHHHHHTSCGGGEECCEEBCSST-TCEECGGGCEETTEEHHHHHHTTSSCHHHHHHHHHHHHTHHHHHHHH
T ss_pred             cccHHHHHHHHHHHhCCCHHHeEEEEEcCCCC-cEEeeHHHceECcEeHHHhccccCCCHHHHHHHHHHHHHHHHHHHhc
Confidence            99999999999999999999999999999999 9999999987631          256677889999999999999995


Q ss_pred             hccCCcchhhHHHHHHHHHHHHHhccCCCCcEEEee-eeeccC-CCccEEEEeEEEcCCCeEEeccCCCCCHHHHHHHHH
Q 018512          259 KAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECA-FVASQV-TELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEK  336 (354)
Q Consensus       259 ~~~kg~~~~s~A~a~~~ii~si~~~~~~~~~v~~~~-~~~g~~-~~~~~~svPv~ig~~Gv~~i~~~~~L~~~E~~~l~~  336 (354)
                         ||++.||+|.++++++++|++|++   .+++++ +++|+| .+++|+|+||++|++|+++++++ +|+++|+++|++
T Consensus       232 ---kgs~~~~~a~a~~~~~~ai~~~~~---~v~~~s~~~~g~~g~~~~~~~vP~~ig~~Gv~~i~~~-~l~~~e~~~l~~  304 (322)
T 1t2d_A          232 ---HASPYVAPAAAIIEMAESYLKDLK---KVLICSTLLEGQYGHSDIFGGTPVVLGANGVEQVIEL-QLNSEEKAKFDE  304 (322)
T ss_dssp             ---TSSCCHHHHHHHHHHHHHHHTTCC---EEEEEEEEEESGGGCEEEEEEEEEEEETTEEEEECCC-CCCHHHHHHHHH
T ss_pred             ---cCchHHHHHHHHHHHHHHHHhCCC---CEEEEEEEecCccCCCceEEEEEEEEeCCeeEEeCCC-CCCHHHHHHHHH
Confidence               579999999999999999999875   488886 679999 57999999999999999999995 999999999999


Q ss_pred             HHHHHHHHHHHhh
Q 018512          337 AKKELAGSIQKGI  349 (354)
Q Consensus       337 sa~~i~~~~~~~~  349 (354)
                      |++.|++.++.+-
T Consensus       305 s~~~L~~~~~~~~  317 (322)
T 1t2d_A          305 AIAETKRMKALAH  317 (322)
T ss_dssp             HHHHHHHHHHHC-
T ss_pred             HHHHHHHHHHHhh
Confidence            9999999988763

>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*

Probab=100.00  E-value=9.7e-54  Score=411.10  Aligned_cols=295  Identities=31%  Similarity=0.505  Sum_probs=260.6

Q ss_pred             CCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCC----CCCeEEEEeCCCcHHhhhCCCcE
Q 018512           40 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMD----TGAVVRGFLGQPQLENALTGMDL  113 (354)
Q Consensus        40 ~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~----~~~~v~~~~~~~d~~~al~~aDv  113 (354)
                      .++|||+|||| |++|++++..|+..++. +|+|+|+++  +++.+.|+.|..    ....++.   ++|++++++|||+
T Consensus         7 ~~~~kI~VIGa-G~vG~~lA~~la~~g~~-~V~L~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~---t~d~~ea~~~aDi   81 (331)
T 1pzg_A            7 QRRKKVAMIGS-GMIGGTMGYLCALRELA-DVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRA---EYSYEAALTGADC   81 (331)
T ss_dssp             SCCCEEEEECC-SHHHHHHHHHHHHHTCC-EEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEE---ECSHHHHHTTCSE
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCC-eEEEEECChhHHHHHHHHHHhhhhccCCCCEEEE---eCCHHHHhCCCCE
Confidence            34579999999 99999999999998875 599999998  456567776642    1233443   3688779999999


Q ss_pred             EEEcCCCCCCCCC-----CHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCCchHHHHHHHHHhCCCCCCCEEEe-
Q 018512          114 VIIPAGVPRKPGM-----TRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-  187 (354)
Q Consensus       114 VIi~ag~~~~~g~-----~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~~~~~~~~~~p~~kviG~-  187 (354)
                      ||+++|.|+++|+     +|.|++.+|+++++++++.|+++||++|++++|||++++++++    ++.+++|++||+|+ 
T Consensus        82 Vi~a~g~p~~~g~~~~~~~r~dl~~~n~~i~~~i~~~i~~~~p~a~vi~~tNP~~~~t~~~----~~~~~~~~~rviG~g  157 (331)
T 1pzg_A           82 VIVTAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKYCPKTFIIVVTNPLDCMVKVM----CEASGVPTNMICGMA  157 (331)
T ss_dssp             EEECCSCSSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECCSSHHHHHHHH----HHHHCCCGGGEEECC
T ss_pred             EEEccCCCCCCCcccCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEEcCchHHHHHHH----HHhcCCChhcEEecc
Confidence            9999999999999     9999999999999999999999999999999999999997654    67789999999999 


Q ss_pred             ccchHHHHHHHHHHHhCCCCCCCcceEEeecCCccccccccccCCCC----------CCChHHHHHHHHHHhcchhHHHh
Q 018512          188 TMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPC----------SFTQEETEYLTNRIQNGGTEVVE  257 (354)
Q Consensus       188 t~ld~~r~~~~la~~l~v~~~~v~~~v~G~hg~~~~vp~~s~~~v~~----------~~~~~~~~~i~~~v~~~~~~i~~  257 (354)
                      |.||+.|+++++|+++|+++++|+++|||+||+ +++|+||++++.+          .+++++++++.++++.++++|++
T Consensus       158 t~LD~~R~~~~la~~lgv~~~~v~~~v~G~Hg~-~~~p~~s~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~g~eii~  236 (331)
T 1pzg_A          158 CMLDSGRFRRYVADALSVSPRDVQATVIGTHGD-CMVPLVRYITVNGYPIQKFIKDGVVTEKQLEEIAEHTKVSGGEIVR  236 (331)
T ss_dssp             HHHHHHHHHHHHHHHHTSCGGGEECCEEBCSST-TCEECGGGCEETTEEHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHH
T ss_pred             chHHHHHHHHHHHHHhCCCHHHceEEEecCCCC-CEeeeeecceECCEEHHHHhhcccCCHHHHHHHHHHHHhccHHHHH
Confidence            699999999999999999999999999999999 9999999987632          14666788899999999999998


Q ss_pred             hhccCCcchhhHHHHHHHHHHHHHhccCCCCcEEEee-eeeccC-CCccEEEEeEEEcCCCeEEeccCCCCCHHHHHHHH
Q 018512          258 AKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECA-FVASQV-TELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLE  335 (354)
Q Consensus       258 ~~~~kg~~~~s~A~a~~~ii~si~~~~~~~~~v~~~~-~~~g~~-~~~~~~svPv~ig~~Gv~~i~~~~~L~~~E~~~l~  335 (354)
                      .. +||++.||+|.++++++++|++|++   .+++++ +++|+| .+++|+|+||++|++|+++++.+ +|+++|+++|+
T Consensus       237 ~~-~kgst~~~~a~a~~~ii~ai~~~~~---~~~~~~v~~~G~~g~~~~~~~vP~~vg~~Gv~~i~~~-~L~~~e~~~l~  311 (331)
T 1pzg_A          237 FL-GQGSAYYAPAASAVAMATSFLNDEK---RVIPCSVYCNGEYGLKDMFIGLPAVIGGAGIERVIEL-ELNEEEKKQFQ  311 (331)
T ss_dssp             HH-SSSCCCHHHHHHHHHHHHHHHTTCC---EEEEEEEEEESGGGCEEEEEEEEEEEETTEEEEECCC-CCCHHHHHHHH
T ss_pred             hh-cCCCccchHHHHHHHHHHHHHhCCC---cEEEEEEEecCccCCCceEEEEEEEEeCCeeEEecCC-CCCHHHHHHHH
Confidence            52 4789999999999999999999975   488887 679998 57999999999999999999995 99999999999


Q ss_pred             HHHHHHHHHHHHhh
Q 018512          336 KAKKELAGSIQKGI  349 (354)
Q Consensus       336 ~sa~~i~~~~~~~~  349 (354)
                      +|++.|++.+++..
T Consensus       312 ~s~~~l~~~~~~~~  325 (331)
T 1pzg_A          312 KSVDDVMALNKAVA  325 (331)
T ss_dssp             HHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHh
Confidence            99999999998764

>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}

Probab=100.00  E-value=7.8e-54  Score=411.25  Aligned_cols=292  Identities=33%  Similarity=0.519  Sum_probs=259.7

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCC----CCCeEEEEeCCCcHHhhhCCCcEEE
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMD----TGAVVRGFLGQPQLENALTGMDLVI  115 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~----~~~~v~~~~~~~d~~~al~~aDvVI  115 (354)
                      ++||+|||| |++|++++..|+..++. +|+|+|+++  +++.++|+.|..    ....+..   ++|+ ++++|||+||
T Consensus        14 ~~kI~ViGa-G~vG~~iA~~la~~g~~-~V~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~---t~d~-~al~~aD~VI   87 (328)
T 2hjr_A           14 RKKISIIGA-GQIGSTIALLLGQKDLG-DVYMFDIIEGVPQGKALDLNHCMALIGSPAKIFG---ENNY-EYLQNSDVVI   87 (328)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCC-EEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEE---ESCG-GGGTTCSEEE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCC-eEEEEECCHHHHHHHHHHHHhHhhccCCCCEEEE---CCCH-HHHCCCCEEE
Confidence            469999999 99999999999999885 599999988  566667777642    1233443   3576 8899999999


Q ss_pred             EcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCCchHHHHHHHHHhCCCCCCCEEEe-ccchHHH
Q 018512          116 IPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVR  194 (354)
Q Consensus       116 i~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~~~~~~~~~~p~~kviG~-t~ld~~r  194 (354)
                      +++|.|+++|++|.|++.+|+++++++++++.++||++|+|++|||++++++++    ++.+|||++||+|+ |.||++|
T Consensus        88 ~avg~p~k~g~tr~dl~~~n~~i~~~i~~~i~~~~p~a~viv~tNP~~~~t~~~----~~~~~~~~~rviG~~t~Ld~~R  163 (328)
T 2hjr_A           88 ITAGVPRKPNMTRSDLLTVNAKIVGSVAENVGKYCPNAFVICITNPLDAMVYYF----KEKSGIPANKVCGMSGVLDSAR  163 (328)
T ss_dssp             ECCSCCCCTTCCSGGGHHHHHHHHHHHHHHHHHHCTTCEEEECCSSHHHHHHHH----HHHHCCCGGGEEESCHHHHHHH
T ss_pred             EcCCCCCCCCCchhhHHhhhHHHHHHHHHHHHHHCCCeEEEEecCchHHHHHHH----HHhcCCChhhEEEeCcHHHHHH
Confidence            999999999999999999999999999999999999999999999999987654    67789999999999 5999999


Q ss_pred             HHHHHHHHhCCCCCCCcceEEeecCCccccccccccCCCC----------CCChHHHHHHHHHHhcchhHHHhhhccCCc
Q 018512          195 ANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPC----------SFTQEETEYLTNRIQNGGTEVVEAKAGAGS  264 (354)
Q Consensus       195 ~~~~la~~l~v~~~~v~~~v~G~hg~~~~vp~~s~~~v~~----------~~~~~~~~~i~~~v~~~~~~i~~~~~~kg~  264 (354)
                      +++++|+++|+++++|+++|||+||+ +++|+||++++.+          .+++++++++.++++++++++++.+ ++|+
T Consensus       164 ~~~~la~~lgv~~~~v~~~v~G~Hg~-t~~p~~s~~~v~G~~~~~~~~~~~~~~~~~~~~~~~v~~~g~eii~~~-~~gs  241 (328)
T 2hjr_A          164 FRCNLSRALGVKPSDVSAIVVGGHGD-EMIPLTSSVTIGGILLSDFVEQGKITHSQINEIIKKTAFGGGEIVELL-KTGS  241 (328)
T ss_dssp             HHHHHHHHHTSCGGGEECCEEBCSST-TCEECGGGCEETTEEHHHHHHTTSSCHHHHHHHHHHHHTHHHHHHHHH-SSCC
T ss_pred             HHHHHHHHhCCCHHHeeEEEecCCCC-ceeeeeeeceECCEEHHHHhhccCCCHHHHHHHHHHHHhhHHHHHhhh-CCCc
Confidence            99999999999999999999999999 9999999987632          1466778899999999999999964 6789


Q ss_pred             chhhHHHHHHHHHHHHHhccCCCCcEEEee-eeeccC-CCccEEEEeEEEcCCCeEEeccCCCCCHHHHHHHHHHHHHHH
Q 018512          265 ATLSMAYAAVKFADACLRGLRGDAGVVECA-FVASQV-TELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELA  342 (354)
Q Consensus       265 ~~~s~A~a~~~ii~si~~~~~~~~~v~~~~-~~~g~~-~~~~~~svPv~ig~~Gv~~i~~~~~L~~~E~~~l~~sa~~i~  342 (354)
                      +.||+|.++++++++|++|++   .+++++ +++|+| .+++|+|+||++|++|+++++.+ +|+++|+++|++|+..|+
T Consensus       242 ~~~~~a~a~~~i~~ai~~~~~---~v~~~~v~~~G~~g~~~~~~~vP~~ig~~Gv~~i~~~-~L~~~e~~~l~~s~~~l~  317 (328)
T 2hjr_A          242 AFYAPAASAVAMAQAYLKDSK---SVLVCSTYLTGQYNVNNLFVGVPVVIGKNGIEDVVIV-NLSDDEKSLFSKSVESIQ  317 (328)
T ss_dssp             CCHHHHHHHHHHHHHHHTTCC---EEEEEEEEEESGGGCEEEEEEEEEEEETTEEEEECCC-CCCHHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHcCCC---cEEEEEEeecCccCCCceEEEEEEEEeCCeeEEecCC-CCCHHHHHHHHHHHHHHH
Confidence            999999999999999999875   488886 679998 57999999999999999999995 999999999999999999


Q ss_pred             HHHHHhh
Q 018512          343 GSIQKGI  349 (354)
Q Consensus       343 ~~~~~~~  349 (354)
                      +.++.+.
T Consensus       318 ~~~~~~~  324 (328)
T 2hjr_A          318 NLVQDLK  324 (328)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            9998775

>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A

Probab=100.00  E-value=1.7e-53  Score=409.23  Aligned_cols=300  Identities=22%  Similarity=0.302  Sum_probs=257.8

Q ss_pred             CCCeEEEEcCCCchHHHHHHHHHhCCCC-----cEEEEEecC----C--chhHHHHHhcCCCCCeEEEEeCCCcHHhhhC
Q 018512           41 AGFKVAILGAAGGIGQPLAMLMKINPLV-----SVLHLYDVV----N--TPGVTADISHMDTGAVVRGFLGQPQLENALT  109 (354)
Q Consensus        41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~-----~ei~L~D~~----~--~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~  109 (354)
                      ++|||+||||+|+||++++..|+..++.     .+|+|+|++    +  +++.++||.|..... ...+..+++++++++
T Consensus         4 ~~~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~dl~~~~~~~-~~~i~~~~~~~~al~   82 (329)
T 1b8p_A            4 TPMRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNEKAQKALQGVMMEIDDCAFPL-LAGMTAHADPMTAFK   82 (329)
T ss_dssp             CCEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCSCHHHHHHHHHHHHHHHTTTCTT-EEEEEEESSHHHHTT
T ss_pred             CCCEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCCCccccccchhhHHHHhhhcccc-cCcEEEecCcHHHhC
Confidence            4689999998899999999999988764     499999998    4  568899999964222 222223467889999


Q ss_pred             CCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecCCCCCchHHHHHHHHHhC-CCCCCCEEEe
Q 018512          110 GMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNSTVPIAAEVFKKAG-TYDPKKLLGV  187 (354)
Q Consensus       110 ~aDvVIi~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~-p~a~viv~tNPv~~~~~~~~~~~~~~~-~~p~~kviG~  187 (354)
                      |||+||++||.++++|++|.|++.+|+++++++++.++++| |++|++++|||+|++++++    ++.+ +||++|++|+
T Consensus        83 ~aD~Vi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~p~a~ii~~SNPv~~~t~~~----~~~~~~~p~~~v~g~  158 (329)
T 1b8p_A           83 DADVALLVGARPRGPGMERKDLLEANAQIFTVQGKAIDAVASRNIKVLVVGNPANTNAYIA----MKSAPSLPAKNFTAM  158 (329)
T ss_dssp             TCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHHHHHH----HHTCTTSCGGGEEEC
T ss_pred             CCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEccCchHHHHHHH----HHHcCCCCHHHEEEe
Confidence            99999999999999999999999999999999999999997 9999999999999998764    6666 9999999999


Q ss_pred             ccchHHHHHHHHHHHhCCCCCCCcc-eEEeecCCccccccccccCCCC-C----CChHH--HHHHHHHHhcchhHHHhhh
Q 018512          188 TMLDVVRANTFVAEVLGLDPRDVDV-PVVGGHAGVTILPLLSQVKPPC-S----FTQEE--TEYLTNRIQNGGTEVVEAK  259 (354)
Q Consensus       188 t~ld~~r~~~~la~~l~v~~~~v~~-~v~G~hg~~~~vp~~s~~~v~~-~----~~~~~--~~~i~~~v~~~~~~i~~~~  259 (354)
                      |.||+.|+++++|+++|+++++|+. +|||+||+ +++|+||++.+.. +    +++++  .+++.+++++++++|++.|
T Consensus       159 t~Ld~~r~~~~la~~lgv~~~~v~~~~v~G~Hg~-s~~p~~s~~~v~g~~~~~~~~~~~~~~~~i~~~v~~~g~eii~~k  237 (329)
T 1b8p_A          159 LRLDHNRALSQIAAKTGKPVSSIEKLFVWGNHSP-TMYADYRYAQIDGASVKDMINDDAWNRDTFLPTVGKRGAAIIDAR  237 (329)
T ss_dssp             CHHHHHHHHHHHHHHHTCCGGGEESCEEEBCSST-TCEEECSSCEETTEEHHHHHCCHHHHHHTHHHHHHTHHHHHHHHH
T ss_pred             ecHHHHHHHHHHHHHhCcCHHHceEEEEEeccCC-cEeeehHHCeECCeeHHHHhccchhhHHHHHHHHHHHHHhhhhcc
Confidence            9999999999999999999999985 68999999 9999999998743 2    23334  3789999999999999976


Q ss_pred             ccCCcchhhHHHHHHHHHHHHHhccCCCCcEEEee-eeeccC--CCccEEEEeEEEcCCCeEEecc-CCCCCHHHHHHHH
Q 018512          260 AGAGSATLSMAYAAVKFADACLRGLRGDAGVVECA-FVASQV--TELPFFASKVRLGRQGAEEIFQ-LGPLNEYERIGLE  335 (354)
Q Consensus       260 ~~kg~~~~s~A~a~~~ii~si~~~~~~~~~v~~~~-~~~g~~--~~~~~~svPv~ig~~Gv~~i~~-~~~L~~~E~~~l~  335 (354)
                       | .++.++.|.++++++++|+++..+  .+++++ +++|+|  |+++|||+||+| ++|++++++ + +|+++|+++|+
T Consensus       238 -g-~~~~~~~a~a~~~~~~ai~~~~~~--~~~~~s~~~~g~yg~~~~~~~s~P~~i-~~Gv~~i~~~~-~l~~~e~~~l~  311 (329)
T 1b8p_A          238 -G-VSSAASAANAAIDHIHDWVLGTAG--KWTTMGIPSDGSYGIPEGVIFGFPVTT-ENGEYKIVQGL-SIDAFSQERIN  311 (329)
T ss_dssp             -S-SCCHHHHHHHHHHHHHHHHHCCTT--CCEEEEEECCSGGGCCTTCEEEEEEEE-ETTEEEECCCC-CCCHHHHHHHH
T ss_pred             -C-CChHHHHHHHHHHHHHHHhcCCCC--cEEEEEEEecCccCCCCCeEEEEEEEE-cCCEEEecCCC-CCCHHHHHHHH
Confidence             3 223344677999999999998422  378887 678988  689999999999 999999998 6 99999999999


Q ss_pred             HHHHHHHHHHHHhhhhh
Q 018512          336 KAKKELAGSIQKGISFS  352 (354)
Q Consensus       336 ~sa~~i~~~~~~~~~~~  352 (354)
                      +|++.|++.++.+.+++
T Consensus       312 ~s~~~l~~~~~~~~~~~  328 (329)
T 1b8p_A          312 VTLNELLEEQNGVQHLL  328 (329)
T ss_dssp             HHHHHHHHHHHHHGGGG
T ss_pred             HHHHHHHHHHHHHHHhh
Confidence            99999999999988764

>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*

Probab=100.00  E-value=5.1e-53  Score=402.79  Aligned_cols=293  Identities=30%  Similarity=0.490  Sum_probs=259.5

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCC----CCCeEEEEeCCCcHHhhhCCCcEEEE
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMD----TGAVVRGFLGQPQLENALTGMDLVII  116 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~----~~~~v~~~~~~~d~~~al~~aDvVIi  116 (354)
                      |||+|||+ |.+|++++..|+..+...+|+|+|+++  .++..+|+.+..    ....+..   ++|++ ++++||+||+
T Consensus         1 mkI~VIGa-G~vG~~la~~la~~~~g~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~---t~d~~-~l~~aDvVii   75 (310)
T 1guz_A            1 MKITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTG---SNDYA-DTANSDIVII   75 (310)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEE---ESCGG-GGTTCSEEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHhHHhhhhcccCCcEEEE---CCCHH-HHCCCCEEEE
Confidence            69999999 999999999999876566999999987  466666777752    1233443   35664 5999999999


Q ss_pred             cCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCCchHHHHHHHHHhCCCCCCCEEEe-ccchHHHH
Q 018512          117 PAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRA  195 (354)
Q Consensus       117 ~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~~~~~~~~~~p~~kviG~-t~ld~~r~  195 (354)
                      +++.|+++|++|.|++.+|+++++++++.+++++|+++++++|||++.++++    +++.+++|++|++|+ |.||+.|+
T Consensus        76 av~~p~~~g~~r~dl~~~n~~i~~~i~~~i~~~~~~~~viv~tNP~~~~~~~----~~~~~~~~~~rviG~gt~ld~~r~  151 (310)
T 1guz_A           76 TAGLPRKPGMTREDLLMKNAGIVKEVTDNIMKHSKNPIIIVVSNPLDIMTHV----AWVRSGLPKERVIGMAGVLDAARF  151 (310)
T ss_dssp             CCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCSSCEEEECCSSHHHHHHH----HHHHHCSCGGGEEEECHHHHHHHH
T ss_pred             eCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEEcCchHHHHHH----HHHhcCCChHHEEECCCchHHHHH
Confidence            9999999999999999999999999999999999999999999999998765    477789999999999 99999999


Q ss_pred             HHHHHHHhCCCCCCCcceEEeecCCccccccccccCCCC-----CCChHHHHHHHHHHhcchhHHHhhhccCCcchhhHH
Q 018512          196 NTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPC-----SFTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMA  270 (354)
Q Consensus       196 ~~~la~~l~v~~~~v~~~v~G~hg~~~~vp~~s~~~v~~-----~~~~~~~~~i~~~v~~~~~~i~~~~~~kg~~~~s~A  270 (354)
                      ++++|+++|+++++|++++||+||+ +++|+||++++..     .+++++++++.+++++++++|++. .+||++.|++|
T Consensus       152 ~~~la~~l~v~~~~v~~~v~G~Hg~-~~~p~~s~~~v~g~~~~~~~~~~~~~~~~~~v~~~g~~ii~~-~~kgs~~~~~a  229 (310)
T 1guz_A          152 RSFIAMELGVSMQDINACVLGGHGD-AMVPVVKYTTVAGIPISDLLPAETIDKLVERTRNGGAEIVEH-LKQGSAFYAPA  229 (310)
T ss_dssp             HHHHHHHHTCCGGGEECCEEECSGG-GEEECGGGCEETTEEHHHHSCHHHHHHHHHHHHTHHHHHHHH-HSSSCCCHHHH
T ss_pred             HHHHHHHhCCCHHHeEEEEEcccCC-cEeeeeecccCCCEEHHHHCCHHHHHHHHHHHHHhHHHHHhh-cCCCCcHHHHH
Confidence            9999999999999999999999998 9999999998743     156778899999999999999996 35789999999


Q ss_pred             HHHHHHHHHHHhccCCCCcEEEee-eeeccC-CCccEEEEeEEEcCCCeEEeccCCCCCHHHHHHHHHHHHHHHHHHHHh
Q 018512          271 YAAVKFADACLRGLRGDAGVVECA-FVASQV-TELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSIQKG  348 (354)
Q Consensus       271 ~a~~~ii~si~~~~~~~~~v~~~~-~~~g~~-~~~~~~svPv~ig~~Gv~~i~~~~~L~~~E~~~l~~sa~~i~~~~~~~  348 (354)
                      .++++++++|++|++   .+++++ +++|+| .+++|+|+||++|++|+++++++ +|+++|+++|++|++.|++.++++
T Consensus       230 ~a~~~~~~ai~~~~~---~~~~~~~~~~g~~g~~~~~~~~P~~ig~~Gv~~i~~~-~l~~~e~~~l~~s~~~l~~~~~~~  305 (310)
T 1guz_A          230 SSVVEMVESIVLDRK---RVLPCAVGLEGQYGIDKTFVGVPVKLGRNGVEQIYEI-NLDQADLDLLQKSAKIVDENCKML  305 (310)
T ss_dssp             HHHHHHHHHHHTTCC---EEEEEEEEEESGGGCEEEEEEEEEEEETTEEEEECCC-CCCHHHHHHHHHHHHHHHHHHHTC
T ss_pred             HHHHHHHHHHHcCCC---cEEEEEEeecCccCCcceEEEEEEEEeCCeeEEEcCC-CCCHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999975   488886 679998 57999999999999999999995 999999999999999999999876


Q ss_pred             hh
Q 018512          349 IS  350 (354)
Q Consensus       349 ~~  350 (354)
                      .+
T Consensus       306 ~~  307 (310)
T 1guz_A          306 ES  307 (310)
T ss_dssp             --
T ss_pred             hh
Confidence            54

>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}

Probab=100.00  E-value=9.9e-53  Score=399.74  Aligned_cols=285  Identities=25%  Similarity=0.339  Sum_probs=228.4

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCC-CCeEEEEeCCCcHHhhhCCCcEEEEcCC
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDT-GAVVRGFLGQPQLENALTGMDLVIIPAG  119 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~-~~~v~~~~~~~d~~~al~~aDvVIi~ag  119 (354)
                      |||+|||| |++|++++..|+..++.++|+|+|+++  +++.++|+.|... ....+...  ++ +++++|||+||++++
T Consensus         1 mkI~VIGa-G~vG~~la~~la~~g~~~eV~L~D~~~~~~~~~~~~l~~~~~~~~~~~i~~--~~-~~a~~~aDvVIi~~~   76 (304)
T 2v6b_A            1 MKVGVVGT-GFVGSTAAFALVLRGSCSELVLVDRDEDRAQAEAEDIAHAAPVSHGTRVWH--GG-HSELADAQVVILTAG   76 (304)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHTTSCCTTSCCEEEE--EC-GGGGTTCSEEEECC-
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHhhhhhhhhcCCeEEEE--CC-HHHhCCCCEEEEcCC
Confidence            69999999 999999999999999888999999987  4677888887642 12233322  35 478999999999999


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCCchHHHHHHHHHhCCCCCCCEEEe-ccchHHHHHHH
Q 018512          120 VPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRANTF  198 (354)
Q Consensus       120 ~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~~~~~~~~~~p~~kviG~-t~ld~~r~~~~  198 (354)
                      .|+++|++|.|++.+|+++++++++.+.+++|++|++++|||++++++++    ++.+  |++||+|+ |.||+.|++++
T Consensus        77 ~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~~~vi~~tNP~~~~~~~~----~~~~--~~~rviG~gt~Ld~~r~~~~  150 (304)
T 2v6b_A           77 ANQKPGESRLDLLEKNADIFRELVPQITRAAPDAVLLVTSNPVDLLTDLA----TQLA--PGQPVIGSGTVLDSARFRHL  150 (304)
T ss_dssp             -----------CHHHHHHHHHHHHHHHHHHCSSSEEEECSSSHHHHHHHH----HHHS--CSSCEEECTTHHHHHHHHHH
T ss_pred             CCCCCCCcHHHHHHhHHHHHHHHHHHHHHhCCCeEEEEecCchHHHHHHH----HHhC--ChhcEEeCCcCchHHHHHHH
Confidence            99999999999999999999999999999999999999999999987654    5654  88999999 99999999999


Q ss_pred             HHHHhCCCCCCCcceEEeecCCccccccccccCCCC------------CCChHHHHHHHHHHhcchhHHHhhhccCCcch
Q 018512          199 VAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPC------------SFTQEETEYLTNRIQNGGTEVVEAKAGAGSAT  266 (354)
Q Consensus       199 la~~l~v~~~~v~~~v~G~hg~~~~vp~~s~~~v~~------------~~~~~~~~~i~~~v~~~~~~i~~~~~~kg~~~  266 (354)
                      +|+++|+++++|++++||+||+ +++|+||++++..            .++++.++++.+++++++++|++   +||+++
T Consensus       151 la~~l~v~~~~v~~~v~G~Hg~-~~~p~~s~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~eii~---~kg~t~  226 (304)
T 2v6b_A          151 MAQHAGVDGTHAHGYVLGEHGD-SEVLAWSSAMVAGMPVADFMQAQNLPWNEQVRAKIDEGTRNAAASIIE---GKRATY  226 (304)
T ss_dssp             HHHHHTSCGGGEECCEEESSST-TEEECGGGCEETTEEHHHHHHHHTCCCSHHHHHHHHHHHTC--------------CC
T ss_pred             HHHHhCcCHHHceEEEecCCCC-ceeeehhHccCCCEEHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHh---ccCCcH
Confidence            9999999999999999999999 9999999998742            14666789999999999999999   578999


Q ss_pred             hhHHHHHHHHHHHHHhccCCCCcEEEee-eeeccCCCccEEEEeEEEcCCCeEEeccCCCCCHHHHHHHHHHHHHHHHHH
Q 018512          267 LSMAYAAVKFADACLRGLRGDAGVVECA-FVASQVTELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSI  345 (354)
Q Consensus       267 ~s~A~a~~~ii~si~~~~~~~~~v~~~~-~~~g~~~~~~~~svPv~ig~~Gv~~i~~~~~L~~~E~~~l~~sa~~i~~~~  345 (354)
                      |++|.++++++++|++|++   .++|++ +++| |.  +|+|+||++|++|+++++++ +|+++|+++|++|++.|++.+
T Consensus       227 ~~~a~a~~~~~~ai~~~~~---~~~~~~~~~~g-yg--~~~~~P~~ig~~Gv~~i~~~-~l~~~e~~~l~~s~~~l~~~~  299 (304)
T 2v6b_A          227 YGIGAALARITEAVLRDRR---AVLTVSAPTPE-YG--VSLSLPRVVGRQGVLSTLHP-KLTGDEQQKLEQSAGVLRGFK  299 (304)
T ss_dssp             HHHHHHHHHHHHHHHTTCC---EEEEEEEEETT-TT--EEEEEEEEEETTEEEEECCC-CCCHHHHHHHHHHHHHHHC--
T ss_pred             HHHHHHHHHHHHHHHhCCC---cEEEEEEEECC-cC--cEEEEEEEEeCCeeEEEcCC-CCCHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999965   488887 6789 84  99999999999999999995 999999999999999999988


Q ss_pred             HHh
Q 018512          346 QKG  348 (354)
Q Consensus       346 ~~~  348 (354)
                      ++.
T Consensus       300 ~~~  302 (304)
T 2v6b_A          300 QQL  302 (304)
T ss_dssp             ---
T ss_pred             HHh
Confidence            754

>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1

Probab=100.00  E-value=3.1e-50  Score=385.01  Aligned_cols=290  Identities=27%  Similarity=0.445  Sum_probs=253.9

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCC-CCeEEEEeCCCcHHhhhCCCcEEEEcCC
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDT-GAVVRGFLGQPQLENALTGMDLVIIPAG  119 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~-~~~v~~~~~~~d~~~al~~aDvVIi~ag  119 (354)
                      |||+|||+ |.+|++++..|+..++..+|+|+|+++  +++...++.+... ....+... + + .+++++||+||++++
T Consensus         1 mkI~VIGa-G~~G~~la~~l~~~g~~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~i~~-~-d-~~~~~~aDvViiav~   76 (319)
T 1a5z_A            1 MKIGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYA-G-D-YADLKGSDVVIVAAG   76 (319)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEE-C-C-GGGGTTCSEEEECCC
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHHHHHhhhhhcCCcEEEe-C-C-HHHhCCCCEEEEccC
Confidence            69999999 999999999999888877999999986  4555566655321 11122222 2 5 478999999999999


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCCchHHHHHHHHHhCCCCCCCEEEe-ccchHHHHHHH
Q 018512          120 VPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRANTF  198 (354)
Q Consensus       120 ~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~~~~~~~~~~p~~kviG~-t~ld~~r~~~~  198 (354)
                      .++++|++|.|++.+|+++++++++.|++++|+++++++|||+++++++    +++.++||++||+|+ |.||+.|++++
T Consensus        77 ~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~~~~~ii~~tNp~~~~~~~----~~~~~~~~~~rviG~~t~ld~~r~~~~  152 (319)
T 1a5z_A           77 VPQKPGETRLQLLGRNARVMKEIARNVSKYAPDSIVIVVTNPVDVLTYF----FLKESGMDPRKVFGSGTVLDTARLRTL  152 (319)
T ss_dssp             CCCCSSCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECSSSHHHHHHH----HHHHHTCCTTTEEECTTHHHHHHHHHH
T ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEeCCcHHHHHHH----HHHHhCCChhhEEeeCccHHHHHHHHH
Confidence            9999999999999999999999999999999999999999999998755    467778999999999 79999999999


Q ss_pred             HHHHhCCCCCCCcceEEeecCCccccccccccCCCC--------C---CChHHHHHHHHHHhcchhHHHhhhccCCcchh
Q 018512          199 VAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPC--------S---FTQEETEYLTNRIQNGGTEVVEAKAGAGSATL  267 (354)
Q Consensus       199 la~~l~v~~~~v~~~v~G~hg~~~~vp~~s~~~v~~--------~---~~~~~~~~i~~~v~~~~~~i~~~~~~kg~~~~  267 (354)
                      +|+++|+++++|+++|||+||+ +++|+||.+++.+        .   ++++.++++.++++++++++++   +||++.|
T Consensus       153 la~~lgv~~~~v~~~v~G~hg~-~~~p~~s~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~eii~---~kg~~~~  228 (319)
T 1a5z_A          153 IAQHCGFSPRSVHVYVIGEHGD-SEVPVWSGAMIGGIPLQNMCQVCQKCDSKILENFAEKTKRAAYEIIE---RKGATHY  228 (319)
T ss_dssp             HHHHHTCCGGGEECCEEBCSST-TCEECGGGCEETTEEHHHHHTTSSSCCHHHHHHHHHHHHHHHHHHHH---HHSCCCH
T ss_pred             HHHHhCcCHHHceEEEEeCCCC-CcccchhhceECCEEHHHHhhcccccCHHHHHHHHHHHHHhhhhhhc---cCCchHH
Confidence            9999999999999999999999 9999999987632        1   4666788999999999999999   4589999


Q ss_pred             hHHHHHHHHHHHHHhccCCCCcEEEee-eeeccC-CCccEEEEeEEEcCCCeEEeccCCCCCHHHHHHHHHHHHHHHHHH
Q 018512          268 SMAYAAVKFADACLRGLRGDAGVVECA-FVASQV-TELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSI  345 (354)
Q Consensus       268 s~A~a~~~ii~si~~~~~~~~~v~~~~-~~~g~~-~~~~~~svPv~ig~~Gv~~i~~~~~L~~~E~~~l~~sa~~i~~~~  345 (354)
                      ++|.++++++++|++|.+   .+++++ +++|+| .+++|+|+||++|++|+++++.+ +|+++|+++|++|++.|++.+
T Consensus       229 ~~a~a~~~~~~ai~~~~~---~~~~~~~~~~g~~g~~~~~~~vP~~vg~~Gv~~i~~~-~L~~~e~~~l~~s~~~l~~~~  304 (319)
T 1a5z_A          229 AIALAVADIVESIFFDEK---RVLTLSVYLEDYLGVKDLCISVPVTLGKHGVERILEL-NLNEEELEAFRKSASILKNAI  304 (319)
T ss_dssp             HHHHHHHHHHHHHHTTCC---EEEEEEEEESSBTTBCSEEEEEEEEEETTEEEEECCC-CCCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhCCC---CEEEEEEEecCccCccceEEEEEEEEeCCceEEEecC-CCCHHHHHHHHHHHHHHHHHH
Confidence            999999999999999865   488887 679998 57999999999999999999995 999999999999999999999


Q ss_pred             HHh
Q 018512          346 QKG  348 (354)
Q Consensus       346 ~~~  348 (354)
                      +.+
T Consensus       305 ~~~  307 (319)
T 1a5z_A          305 NEI  307 (319)
T ss_dssp             HHH
T ss_pred             HHh
Confidence            876

>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1

Probab=100.00  E-value=1.8e-48  Score=371.14  Aligned_cols=290  Identities=19%  Similarity=0.268  Sum_probs=247.3

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCC--CCeEEEEeCCCcHHhhhCCCcEEEEc
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDT--GAVVRGFLGQPQLENALTGMDLVIIP  117 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~--~~~v~~~~~~~d~~~al~~aDvVIi~  117 (354)
                      +|||+|||+ |.+|++++..|+..++..+|+|+|+++  .++...++.|...  ...++...  +|+ +++++||+||++
T Consensus         1 m~kI~VIGa-G~~G~~la~~L~~~g~~~~V~l~d~~~~~~~~~~~~l~~~~~~~~~~~~~~~--~d~-~~~~~aDvViia   76 (309)
T 1hyh_A            1 ARKIGIIGL-GNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVI--NDW-AALADADVVIST   76 (309)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEE--SCG-GGGTTCSEEEEC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEcCCHHHHHHHHHHHHhhhhhcCCCeEEEe--CCH-HHhCCCCEEEEe
Confidence            379999998 999999999999888555999999986  4556666654321  11233322  466 789999999999


Q ss_pred             CCCCCC----CCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCCchHHHHHHHHHhCCCCCCCEEEe-ccchH
Q 018512          118 AGVPRK----PGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDV  192 (354)
Q Consensus       118 ag~~~~----~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~~~~~~~~~~p~~kviG~-t~ld~  192 (354)
                      ++.+++    +|++|.|++.+|+++++++++.+.+++|+++++++|||+++++++    +++.+++|+.|++|+ |.||+
T Consensus        77 v~~~~~~~~~~g~~r~~l~~~n~~i~~~i~~~i~~~~~~~~ii~~tNp~~~~~~~----~~~~~~~~~~rvig~gt~ld~  152 (309)
T 1hyh_A           77 LGNIKLQQDNPTGDRFAELKFTSSMVQSVGTNLKESGFHGVLVVISNPVDVITAL----FQHVTGFPAHKVIGTGTLLDT  152 (309)
T ss_dssp             CSCGGGTC-------CTTHHHHHHHHHHHHHHHHHTTCCSEEEECSSSHHHHHHH----HHHHHCCCGGGEEECTTHHHH
T ss_pred             cCCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEEcCcHHHHHHH----HHHhcCCCHHHEeecCccchH
Confidence            999888    999999999999999999999999999999999999999998654    477789999999999 99999


Q ss_pred             HHHHHHHHHHhCCCCCCCcceEEeecCCccccccccccCCCC-C------CChHHHHHHHHHHhcchhHHHhhhccCCcc
Q 018512          193 VRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPC-S------FTQEETEYLTNRIQNGGTEVVEAKAGAGSA  265 (354)
Q Consensus       193 ~r~~~~la~~l~v~~~~v~~~v~G~hg~~~~vp~~s~~~v~~-~------~~~~~~~~i~~~v~~~~~~i~~~~~~kg~~  265 (354)
                      .|+++.+++.+++++.+++++++|+||+ +++|+||++.+.. +      ++++.|+++.++++++++++++.   ||++
T Consensus       153 ~r~~~~~a~~l~~~~~~v~~~v~G~hg~-~~~~~~s~~~v~g~~~~~~~~~~~~~~~~~~~~v~~~g~~ii~~---kg~~  228 (309)
T 1hyh_A          153 ARMQRAVGEAFDLDPRSVSGYNLGEHGN-SQFVAWSTVRVMGQPIVTLADAGDIDLAAIEEEARKGGFTVLNG---KGYT  228 (309)
T ss_dssp             HHHHHHHHHHHTCCGGGCBCCEEBCTTT-TCEECTTTCEETTEEGGGC-----CCHHHHHHHHHHHHHHHHHH---HSSC
T ss_pred             HHHHHHHHHHhCCChhheEEEEEeCCCC-cEeeccccceECCEEHHHhccCCHHHHHHHHHHHHHhHHHHHhc---cCCc
Confidence            9999999999999999999999999999 9999999987632 1      45667899999999999999995   5789


Q ss_pred             hhhHHHHHHHHHHHHHhccCCCCcEEEee-eeeccCCCccEEEEeEEEcCCCeEEeccCCCCCHHHHHHHHHHHHHHHHH
Q 018512          266 TLSMAYAAVKFADACLRGLRGDAGVVECA-FVASQVTELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGS  344 (354)
Q Consensus       266 ~~s~A~a~~~ii~si~~~~~~~~~v~~~~-~~~g~~~~~~~~svPv~ig~~Gv~~i~~~~~L~~~E~~~l~~sa~~i~~~  344 (354)
                      .|++|.++++++++|++|++   .+++++ +++|   +++|+|+||++|++|+++++++ +|+++|+++|++|++.|++.
T Consensus       229 ~~~~a~a~~~~~~ai~~~~~---~~~~~~~~~~g---~~~~~~vP~~i~~~Gv~~i~~~-~l~~~e~~~l~~s~~~l~~~  301 (309)
T 1hyh_A          229 SYGVATSAIRIAKAVMADAH---AELVVSNRRDD---MGMYLSYPAIIGRDGVLAETTL-DLTTDEQEKLLQSRDYIQQR  301 (309)
T ss_dssp             CHHHHHHHHHHHHHHHTTCC---EEEEEEEECTT---TCSEEEEEEEEETTEEEEECCC-CCCHHHHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHcCCC---cEEEEEEEECC---CCeEEEEEEEEeCCceEEEeCC-CCCHHHHHHHHHHHHHHHHH
Confidence            99999999999999999976   488886 6678   7999999999999999999995 99999999999999999999


Q ss_pred             HHHhhh
Q 018512          345 IQKGIS  350 (354)
Q Consensus       345 ~~~~~~  350 (354)
                      ++.+.+
T Consensus       302 ~~~~~~  307 (309)
T 1hyh_A          302 FDEIVD  307 (309)
T ss_dssp             HHHHHT
T ss_pred             HHHHhh
Confidence            998765

>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A

Probab=100.00  E-value=3.2e-47  Score=363.76  Aligned_cols=292  Identities=30%  Similarity=0.480  Sum_probs=255.4

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCC----CCCeEEEEeCCCcHHhhhCCCcEEE
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMD----TGAVVRGFLGQPQLENALTGMDLVI  115 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~----~~~~v~~~~~~~d~~~al~~aDvVI  115 (354)
                      ++||+|||| |.+|+.++..|+..++. +|+|+|+++  .++..+|+.+..    ....+..   ++|+ +++++||+||
T Consensus         4 ~~kI~VIGa-G~~G~~ia~~la~~g~~-~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~---t~d~-~a~~~aDiVi   77 (317)
T 2ewd_A            4 RRKIAVIGS-GQIGGNIAYIVGKDNLA-DVVLFDIAEGIPQGKALDITHSMVMFGSTSKVIG---TDDY-ADISGSDVVI   77 (317)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHHTCC-EEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEE---ESCG-GGGTTCSEEE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCc-eEEEEeCCchHHHHHHHHHHhhhhhcCCCcEEEE---CCCH-HHhCCCCEEE
Confidence            579999999 99999999999988864 699999987  455556665532    1223443   3466 7899999999


Q ss_pred             EcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCCchHHHHHHHHHhCCCCCCCEEEe-ccchHHH
Q 018512          116 IPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVR  194 (354)
Q Consensus       116 i~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~~~~~~~~~~p~~kviG~-t~ld~~r  194 (354)
                      +++|.|+++|++|.|++.+|.++++++++++++++|+++++++|||++++++.    +++.+++|++||+|+ |.+|+.|
T Consensus        78 ~avg~p~~~g~~r~d~~~~~~~i~~~i~~~i~~~~~~~iii~~sNp~~~~~~~----~~~~~~~~~~rviG~~t~ld~~r  153 (317)
T 2ewd_A           78 ITASIPGRPKDDRSELLFGNARILDSVAEGVKKYCPNAFVICITNPLDVMVSH----FQKVSGLPHNKVCGMAGVLDSSR  153 (317)
T ss_dssp             ECCCCSSCCSSCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECCSSHHHHHHH----HHHHHCCCGGGEEESCHHHHHHH
T ss_pred             EeCCCCCCCCCcHHHHHHhhHHHHHHHHHHHHHHCCCcEEEEeCChHHHHHHH----HHHhhCCCHHHEEeccCcHHHHH
Confidence            99999999999999999999999999999999999999999999999998754    467778999999999 6999999


Q ss_pred             HHHHHHHHhCCCCCCCcceEEeecCCccccccccccCCCC----------CCChHHHHHHHHHHhcchhHHHhhhccCCc
Q 018512          195 ANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPC----------SFTQEETEYLTNRIQNGGTEVVEAKAGAGS  264 (354)
Q Consensus       195 ~~~~la~~l~v~~~~v~~~v~G~hg~~~~vp~~s~~~v~~----------~~~~~~~~~i~~~v~~~~~~i~~~~~~kg~  264 (354)
                      +++.+|+++|+++++++++|+|+||+ +++|+||.+++.+          .+++++++++.+.++.+++++++.. |+|+
T Consensus       154 ~~~~la~~lg~~~~~v~~~v~g~Hg~-~~~~~~~~a~v~g~~~~~~~~~g~~~~~~id~~~~~~~~~~~ei~~~~-g~g~  231 (317)
T 2ewd_A          154 FRTFIAQHFGVNASDVSANVIGGHGD-GMVPATSSVSVGGVPLSSFIKQGLITQEQIDEIVCHTRIAWKEVADNL-KTGT  231 (317)
T ss_dssp             HHHHHHHHHTSCGGGEECCEEBCSST-TCEECGGGCEETTEEHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHHH-SSSC
T ss_pred             HHHHHHHHhCcChhhceEEEEecCCC-ceeEEeeccccCCEEHHHHHhccCCCHHHHHHHHHHHHhhHHHHHHhh-cCCc
Confidence            99999999999999999999999999 9999999986532          2566778888888888999999864 6889


Q ss_pred             chhhHHHHHHHHHHHHHhccCCCCcEEEee-eeeccC-CCccEEEEeEEEcCCCeEEeccCCCCCHHHHHHHHHHHHHHH
Q 018512          265 ATLSMAYAAVKFADACLRGLRGDAGVVECA-FVASQV-TELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELA  342 (354)
Q Consensus       265 ~~~s~A~a~~~ii~si~~~~~~~~~v~~~~-~~~g~~-~~~~~~svPv~ig~~Gv~~i~~~~~L~~~E~~~l~~sa~~i~  342 (354)
                      +.|++|.++++++++|++|.+   .+++++ +++|+| .+++|+|+||++|++|+++++.+ +|+++|+++|++|++.|+
T Consensus       232 ~~~~~a~a~~~~~~ai~~~~~---~~~~~~~~~~G~~g~~~~~~~~P~~i~~~Gv~~i~~~-~l~~~e~~~l~~s~~~l~  307 (317)
T 2ewd_A          232 AYFAPAAAAVKMAEAYLKDKK---AVVPCSAFCSNHYGVKGIYMGVPTIIGKNGVEDILEL-DLTPLEQKLLGESINEVN  307 (317)
T ss_dssp             CCHHHHHHHHHHHHHHHTTCC---EEEEEEEEESSSTTCSSEEEEEEEEEETTEEEEECCC-CCCHHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHcCCC---eEEEEEEEecCccCCcceEEEeEEEEcCCeeEEecCC-CCCHHHHHHHHHHHHHHH
Confidence            999999999999999999865   488887 678998 57999999999999999999995 999999999999999999


Q ss_pred             HHHHHhh
Q 018512          343 GSIQKGI  349 (354)
Q Consensus       343 ~~~~~~~  349 (354)
                      +.+++..
T Consensus       308 ~~~~~~~  314 (317)
T 2ewd_A          308 TISKVLD  314 (317)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHhh
Confidence            9998764

>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*

Probab=100.00  E-value=3.7e-45  Score=350.79  Aligned_cols=301  Identities=24%  Similarity=0.350  Sum_probs=251.6

Q ss_pred             CCCeEEEEcCCCchHHHHHHHHHhCCCC-----cEEEEEecCC----chhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCC
Q 018512           41 AGFKVAILGAAGGIGQPLAMLMKINPLV-----SVLHLYDVVN----TPGVTADISHMDTGAVVRGFLGQPQLENALTGM  111 (354)
Q Consensus        41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~-----~ei~L~D~~~----~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~a  111 (354)
                      ++|||+|+||+|++|++++..|+.+++.     .+|+++|+++    ..+.++|+.|..... +..+..+.+++++++|+
T Consensus         3 ~~mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~~~~~~~~g~~~dl~~~~~~~-~~di~~~~~~~~a~~~~   81 (327)
T 1y7t_A            3 APVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFPL-LAGLEATDDPKVAFKDA   81 (327)
T ss_dssp             CCEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTT-EEEEEEESCHHHHTTTC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCCCchhhccchhhhhhcccccc-cCCeEeccChHHHhCCC
Confidence            4579999999999999999999988764     3999999974    356678898763211 22222235678899999


Q ss_pred             cEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecCCCCCchHHHHHHHHHhC-CCCCCCEEEecc
Q 018512          112 DLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNSTVPIAAEVFKKAG-TYDPKKLLGVTM  189 (354)
Q Consensus       112 DvVIi~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~-p~a~viv~tNPv~~~~~~~~~~~~~~~-~~p~~kviG~t~  189 (354)
                      |+||++||.+++++++|.+++..|+.+++++++.+++++ |+++++++|||++.++++.    ++.+ ++|+.+++|.|.
T Consensus        82 D~Vih~Ag~~~~~~~~~~~~~~~Nv~~t~~l~~a~~~~~~~~~~vvv~snp~~~~~~~~----~~~~~~~~p~~~yg~tk  157 (327)
T 1y7t_A           82 DYALLVGAAPRKAGMERRDLLQVNGKIFTEQGRALAEVAKKDVKVLVVGNPANTNALIA----YKNAPGLNPRNFTAMTR  157 (327)
T ss_dssp             SEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHHHHHH----HHTCTTSCGGGEEECCH
T ss_pred             CEEEECCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeCCchhhhHHHH----HHHcCCCChhheeccch
Confidence            999999999998899999999999999999999999998 9999999999998777643    4555 789999999999


Q ss_pred             chHHHHHHHHHHHhCCCCCCCc-ceEEeecCCccccccccccCCCC----C-CChHH-HHHHHHHHhcchhHHHhhhccC
Q 018512          190 LDVVRANTFVAEVLGLDPRDVD-VPVVGGHAGVTILPLLSQVKPPC----S-FTQEE-TEYLTNRIQNGGTEVVEAKAGA  262 (354)
Q Consensus       190 ld~~r~~~~la~~l~v~~~~v~-~~v~G~hg~~~~vp~~s~~~v~~----~-~~~~~-~~~i~~~v~~~~~~i~~~~~~k  262 (354)
                      +++.|+.+.+++.+|+++..++ ..|||+|++ +++|.|++..+.+    . ++++. ++++.+++++++++|++.| | 
T Consensus       158 l~~er~~~~~a~~~g~~~~~vr~~~V~G~h~~-~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~v~~~g~~ii~~k-g-  234 (327)
T 1y7t_A          158 LDHNRAKAQLAKKTGTGVDRIRRMTVWGNHSS-TMFPDLFHAEVDGRPALELVDMEWYEKVFIPTVAQRGAAIIQAR-G-  234 (327)
T ss_dssp             HHHHHHHHHHHHHHTCCGGGEECCEEEBCSST-TCEEECSSCEETTEEGGGTSCHHHHHHTHHHHHHHHHHHHHHHH-S-
T ss_pred             HHHHHHHHHHHHHhCcChhheeeeEEEcCCCC-eEEEEeeeeeeCCeeHHHhccchhHHHHHHHHHHHHHHHHHHcc-C-
Confidence            9999999999999999999998 578999998 8999999987632    1 23222 4789999999999999976 2 


Q ss_pred             CcchhhHHHHHHHHHHHHHhccCCCCcEEEee-eeeccC--CCccEEEEeEEEcCCCeEEeccCCCCCHHHHHHHHHHHH
Q 018512          263 GSATLSMAYAAVKFADACLRGLRGDAGVVECA-FVASQV--TELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKK  339 (354)
Q Consensus       263 g~~~~s~A~a~~~ii~si~~~~~~~~~v~~~~-~~~g~~--~~~~~~svPv~ig~~Gv~~i~~~~~L~~~E~~~l~~sa~  339 (354)
                      +++.+++|.++++++++|++|++.+ .+++++ +++|+|  ++++|||+||+| ++|++++++.++|+++|+++|++|++
T Consensus       235 ~~~~~~~a~a~~~~~~~i~~~~~~~-~~~~~~~~~~g~yg~~~~~~~~~P~~i-~~G~~~i~~~~~l~~~e~~~l~~s~~  312 (327)
T 1y7t_A          235 ASSAASAANAAIEHIRDWALGTPEG-DWVSMAVPSQGEYGIPEGIVYSFPVTA-KDGAYRVVEGLEINEFARKRMEITAQ  312 (327)
T ss_dssp             SCCHHHHHHHHHHHHHHHHTBCCTT-CCEEEEEECSSGGGCCTTSEEEEEEEE-ETTEEEECCCCCCCHHHHHHHHHHHH
T ss_pred             CCchHHHHHHHHHHHHHHHcCCCCC-eEEEEEEEecCccCCCCCeEEEEEEEE-cCCeEEecCCCCCCHHHHHHHHHHHH
Confidence            2334467889999999999996212 388887 678998  689999999999 99999998834999999999999999


Q ss_pred             HHHHHHHHhhhh
Q 018512          340 ELAGSIQKGISF  351 (354)
Q Consensus       340 ~i~~~~~~~~~~  351 (354)
                      .|++.++.+.++
T Consensus       313 ~l~~~~~~~~~~  324 (327)
T 1y7t_A          313 ELLDEMEQVKAL  324 (327)
T ss_dssp             HHHHHHHHHHHT
T ss_pred             HHHHHHHHHHhc
Confidence            999999988653

>1up7_A 6-phospho-beta-glucosidase; hydrolase, family4 hydrolase, Na dependent; HET: G6P NAD; 2.4A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2 PDB: 1up6_A* 1up4_A

Probab=100.00  E-value=1.1e-42  Score=342.88  Aligned_cols=292  Identities=13%  Similarity=0.090  Sum_probs=227.5

Q ss_pred             CCCeEEEEcCCCch-HHHHHHHHHh--CCC-CcEEEEEecCC--chhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEE
Q 018512           41 AGFKVAILGAAGGI-GQPLAMLMKI--NPL-VSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLV  114 (354)
Q Consensus        41 ~~~kI~IiGa~G~v-G~~~a~~l~~--~~~-~~ei~L~D~~~--~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvV  114 (354)
                      +++||+|||| |++ +..++..|+.  .++ .+||+|+|+++  +++ +.|+.+.......+.. .++|+++|++|||||
T Consensus         1 ~~~KI~IIGa-G~v~~~~l~~~l~~~~~~l~~~el~L~Di~~~~~~~-~~~~~~~~~~~~~~v~-~t~d~~~al~~AD~V   77 (417)
T 1up7_A            1 RHMRIAVIGG-GSSYTPELVKGLLDISEDVRIDEVIFYDIDEEKQKI-VVDFVKRLVKDRFKVL-ISDTFEGAVVDAKYV   77 (417)
T ss_dssp             CCCEEEEETT-TCTTHHHHHHHHHHHTTTSCCCEEEEECSCHHHHHH-HHHHHHHHHTTSSEEE-ECSSHHHHHTTCSEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHhcccCCCcCEEEEEeCCHHHHHH-HHHHHHHHhhCCeEEE-EeCCHHHHhCCCCEE
Confidence            3579999999 776 2223345565  566 78999999987  232 4555442111113332 256888999999999


Q ss_pred             EEcCCCCCCCCCCHHH--------------------HHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCCchHHHHHHHH
Q 018512          115 IIPAGVPRKPGMTRDD--------------------LFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFK  174 (354)
Q Consensus       115 Ii~ag~~~~~g~~r~d--------------------~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~~~~~  174 (354)
                      |+++|.++++|++|++                    ++.+|+++++++++.|+++| +||+|++|||+|++|++    ++
T Consensus        78 iitagvg~~~~~~rd~~i~~k~glvgqeT~G~GGi~~~~rni~i~~~i~~~i~~~~-~A~lin~TNPvdi~t~a----~~  152 (417)
T 1up7_A           78 IFQFRPGGLKGRENDEGIPLKYGLIGQETTGVGGFSAALRAFPIVEEYVDTVRKTS-NATIVNFTNPSGHITEF----VR  152 (417)
T ss_dssp             EECCCTTHHHHHHHHHHGGGGGTCCCCSSSTHHHHHHHHHHHHHHHHHHHHHHHTT-CCEEEECSSSHHHHHHH----HH
T ss_pred             EEcCCCCCCCccchhhhhhhhcCcccccccccchhHHhhccHHHHHHHHHHHHHHC-CEEEEEeCChHHHHHHH----HH
Confidence            9999998887777642                    46899999999999999999 99999999999999754    57


Q ss_pred             HhCCCCCCCEEEeccchHHHHHHHHHHHhCCCCCCCcceEEe-----------ecCCcccccccccc---CCCC----CC
Q 018512          175 KAGTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVVG-----------GHAGVTILPLLSQV---KPPC----SF  236 (354)
Q Consensus       175 ~~~~~p~~kviG~t~ld~~r~~~~la~~l~v~~~~v~~~v~G-----------~hg~~~~vp~~s~~---~v~~----~~  236 (354)
                      +.+  |++||||+|... .|+++.+|+.+|+++++|+++++|           +||+ +++|.||..   .+++    ++
T Consensus       153 k~~--p~~rviG~c~~~-~r~~~~la~~lgv~~~~v~~~v~GlNH~~w~~~~~~hG~-d~~p~~~~~~~~~~~~~~~~~~  228 (417)
T 1up7_A          153 NYL--EYEKFIGLCNVP-INFIREIAEMFSARLEDVFLKYYGLNHLSFIEKVFVKGE-DVTEKVFENLKLKLSNIPDEDF  228 (417)
T ss_dssp             HTT--CCSSEEECCSHH-HHHHHHHHHHTTCCGGGEEEEEEEETTEEEEEEEEETTE-ECHHHHHHHHTTC---CCTTSC
T ss_pred             HhC--CCCCEEEeCCCH-HHHHHHHHHHhCCCHHHCeEEEEeecceeeEEEeecCCc-EehhhHHHHHHHhhCCCcCCch
Confidence            765  778999998653 599999999999999999999999           9999 999999985   3311    22


Q ss_pred             ---------------------ChHHHHHH---------HHHHhcchhHHHh-------hhccCCcchhhHHHHHHHHHHH
Q 018512          237 ---------------------TQEETEYL---------TNRIQNGGTEVVE-------AKAGAGSATLSMAYAAVKFADA  279 (354)
Q Consensus       237 ---------------------~~~~~~~i---------~~~v~~~~~~i~~-------~~~~kg~~~~s~A~a~~~ii~s  279 (354)
                                           +++.++++         .+++++..+++++       ...+||++.|  +.++++++++
T Consensus       229 ~~~~~~~~g~~p~~y~~~y~~~~~~~~~~~~~~~r~~~~~~~~~~~~~i~~~~~~~~~~l~~kg~t~~--~~~a~~ii~A  306 (417)
T 1up7_A          229 PTWFYDSVRLIVNPYLRYYLMEKKMFKKISTHELRAREVMKIEKELFEKYRTAVEIPEELTKRGGSMY--STAAAHLIRD  306 (417)
T ss_dssp             CHHHHHHHCSEECGGGHHHHTHHHHHHHHHTSCCHHHHHHHHHHHHHHHHTTCSSCCGGGGGSTTTTH--HHHHHHHHHH
T ss_pred             HHHHHHhcCCCccchhhhccCCHHHHHhccccchHHHHHHHHHHHHHHHHHhhcccchhhhhcCCcHH--HHHHHHHHHH
Confidence                                 12333444         4566677788872       1124566655  6899999999


Q ss_pred             HHhccCCCCcEEEee-eeeccC---CCccEEEEeEEEcCCCeEEeccCCCCCHHHHHHHHHHHHHHHHHHHHhhh
Q 018512          280 CLRGLRGDAGVVECA-FVASQV---TELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSIQKGIS  350 (354)
Q Consensus       280 i~~~~~~~~~v~~~~-~~~g~~---~~~~~~svPv~ig~~Gv~~i~~~~~L~~~E~~~l~~sa~~i~~~~~~~~~  350 (354)
                      |++|++   .+++++ ..+|.|   |+|+++|+||+||++|++++... +|+++|+++++.++...+..++.+++
T Consensus       307 I~~d~~---~~~~vsv~n~G~i~~lp~d~~vevP~~vg~~Gi~~i~~~-~L~~~e~~~l~~~~~~e~l~veA~~~  377 (417)
T 1up7_A          307 LETDEG---KIHIVNTRNNGSIENLPDDYVLEIPCYVRSGRVHTLSQG-KGDHFALSFIHAVKMYERLTIEAYLK  377 (417)
T ss_dssp             HHSSSC---EEEEEEEECTTSSTTSCTTCEEEEEEEEETTEEEEBCCC-CCCHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHcCCC---eEEEEEEecCCccCCCCCCeEEEEeEEEeCCceEEeecC-CCCHHHHHHHHHHHHHHHHHHHHHHh
Confidence            999976   488887 568987   58999999999999999999984 99999999999999999999988764

>1s6y_A 6-phospho-beta-glucosidase; hydrolase, structural genomics, PSI, protein structure initi midwest center for structural genomics; 2.31A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.2

Probab=100.00  E-value=1.1e-41  Score=338.82  Aligned_cols=293  Identities=14%  Similarity=0.142  Sum_probs=226.6

Q ss_pred             CCeEEEEcCCCch-HHHHHHHHHh--CCC-CcEEEEEecCC--chhH-HHHHh-----cCCCCCeEEEEeCCCcHHhhhC
Q 018512           42 GFKVAILGAAGGI-GQPLAMLMKI--NPL-VSVLHLYDVVN--TPGV-TADIS-----HMDTGAVVRGFLGQPQLENALT  109 (354)
Q Consensus        42 ~~kI~IiGa~G~v-G~~~a~~l~~--~~~-~~ei~L~D~~~--~~g~-~~dl~-----~~~~~~~v~~~~~~~d~~~al~  109 (354)
                      ++||+|||| |++ |..++..|+.  .++ ..||+|+|+++  .+.. ..|+.     +......++.   ++|+++|++
T Consensus         7 ~~KIaVIGa-Gsv~~~al~~~L~~~~~~l~~~ev~L~Di~~~~e~~~~~~~~~~~~~~~~~~~~~i~~---t~D~~eal~   82 (450)
T 1s6y_A            7 RLKIATIGG-GSSYTPELVEGLIKRYHELPVGELWLVDIPEGKEKLEIVGALAKRMVEKAGVPIEIHL---TLDRRRALD   82 (450)
T ss_dssp             CEEEEEETT-TCTTHHHHHHHHHHTTTTCCEEEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCCEEEE---ESCHHHHHT
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCCCCCCEEEEEEcCCChHHHHHHHHHHHHHHhhcCCCcEEEE---eCCHHHHhC
Confidence            479999999 888 7777777776  555 78999999986  3211 12222     2222334443   468889999


Q ss_pred             CCcEEEEcCCCCCCCCCCHHH--------------------HHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCCchHHH
Q 018512          110 GMDLVIIPAGVPRKPGMTRDD--------------------LFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIA  169 (354)
Q Consensus       110 ~aDvVIi~ag~~~~~g~~r~d--------------------~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~  169 (354)
                      |||+||+++|.++++|++|++                    ++.+|+++++++++.|+++||+||+|++|||+|++|++ 
T Consensus        83 gAD~VVitagv~~~~~~~rd~~ip~~~g~~~~et~G~ggi~~~~rni~i~~~i~~~i~~~~P~a~ii~~tNPvdivT~a-  161 (450)
T 1s6y_A           83 GADFVTTQFRVGGLEARAKDERIPLKYGVIGQETNGPGGLFKGLRTIPVILDIIRDMEELCPDAWLINFTNPAGMVTEA-  161 (450)
T ss_dssp             TCSEEEECCCTTHHHHHHHHHHTGGGGTCCCCSSSTHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECSSSHHHHHHH-
T ss_pred             CCCEEEEcCCCCCCcchhhhhhhhhhcCcccccccccchHHHHhhhHHHHHHHHHHHHHHCCCeEEEEeCCcHHHHHHH-
Confidence            999999999998888877764                    47999999999999999999999999999999998754 


Q ss_pred             HHHHHHhCCCCCCCEEEeccchHHHHHHHHHHHhCCCCCCCcceEEe-----------ecCCccccccccccCCC-----
Q 018512          170 AEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVVG-----------GHAGVTILPLLSQVKPP-----  233 (354)
Q Consensus       170 ~~~~~~~~~~p~~kviG~t~ld~~r~~~~la~~l~v~~~~v~~~v~G-----------~hg~~~~vp~~s~~~v~-----  233 (354)
                         +++.+  |++||||+|... .|+++.+|+.+|+++++|+++++|           +||+ +++|.|+.....     
T Consensus       162 ---~~k~~--p~~rViG~c~~~-~r~~~~la~~lgv~~~~v~~~v~GlNH~~w~~~v~~~G~-d~~p~~~~~~~~~~~~g  234 (450)
T 1s6y_A          162 ---VLRYT--KQEKVVGLCNVP-IGMRMGVAKLLGVDADRVHIDFAGLNHMVFGLHVYLDGV-EVTEKVIDLVAHPDRSG  234 (450)
T ss_dssp             ---HHHHC--CCCCEEECCSHH-HHHHHHHHHHHTSCGGGEEEEEEEETTEEEEEEEEETTE-ECHHHHHHHHSCC----
T ss_pred             ---HHHhC--CCCCEEEeCCcH-HHHHHHHHHHhCCCHHHcEEEEEeeecceeEEEeeeCCc-CchHhHHHHHhhhcccc
Confidence               57775  778999998665 599999999999999999999999           9999 999999873211     


Q ss_pred             --------CCC---------------------ChHHH-------------HHHHHHHhcchhHHH-----hhhcc--CCc
Q 018512          234 --------CSF---------------------TQEET-------------EYLTNRIQNGGTEVV-----EAKAG--AGS  264 (354)
Q Consensus       234 --------~~~---------------------~~~~~-------------~~i~~~v~~~~~~i~-----~~~~~--kg~  264 (354)
                              .++                     +++.+             .++.+++++..++++     +.+..  .+.
T Consensus       235 ~~~~~~~~~~~~~~~~~~~g~~p~~y~~yy~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ei~~~~~~~~k~~~~~~~  314 (450)
T 1s6y_A          235 VTMKNIVDLGWEPDFLKGLKVLPCPYHRYYFQTDKMLAEELEAAKTKGTRAEVVQQLEKELFELYKDPNLAIKPPQLEKR  314 (450)
T ss_dssp             --------CCCCHHHHHHHCSBCCGGGHHHHSHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHTTTTCC-----------C
T ss_pred             ccccccccCccHHHHHHhcCCccchhhhhhcCCHHHHHhhhccccccchHHHHHHHHHHHHHHHHhhhccccccchhhcc
Confidence                    011                     12211             234556677777887     32210  013


Q ss_pred             chhhHHHHHHHHHHHHHhccCCCCcEEEee-eeeccC---CCccEEEEeEEEcCCCeEEeccCCCCCHHHHHHHHHHHHH
Q 018512          265 ATLSMAYAAVKFADACLRGLRGDAGVVECA-FVASQV---TELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKE  340 (354)
Q Consensus       265 ~~~s~A~a~~~ii~si~~~~~~~~~v~~~~-~~~g~~---~~~~~~svPv~ig~~Gv~~i~~~~~L~~~E~~~l~~sa~~  340 (354)
                      +.+++|.++++++++|++|++   .+++++ ..+|.|   |+|+++|+||+||++|++++... +|+++|+++++.++..
T Consensus       315 ~~~~~~~~a~~ii~AI~~d~~---~~~~vsv~n~G~i~~lp~d~~vevP~vvg~~Gi~~i~~~-~L~~~e~~l~~~~~~~  390 (450)
T 1s6y_A          315 GGAYYSDAACSLISSIYNDKR---DIQPVNTRNNGAIASISAESAVEVNCVITKDGPKPIAVG-DLPVAVRGLVQQIKSF  390 (450)
T ss_dssp             CSCCHHHHHHHHHHHHHHTCC---CEEEEEEECTTSBTTSCTTSEEEEEEEEETTEEEECCCB-CCCHHHHHHHHHHHHH
T ss_pred             cchHHHHHHHHHHHHHHcCCC---eEEEEEeecCceecCCCCCeEEEEeEEEcCCCeEEeecC-CCCHHHHHHHHHHHHH
Confidence            345667999999999999976   388887 568987   58999999999999999999985 9999999999999887


Q ss_pred             HHHHHHHhhh
Q 018512          341 LAGSIQKGIS  350 (354)
Q Consensus       341 i~~~~~~~~~  350 (354)
                      -+-.++.+++
T Consensus       391 e~l~veAa~~  400 (450)
T 1s6y_A          391 ERVAAEAAVT  400 (450)
T ss_dssp             HHHHHHHHHH
T ss_pred             HHHHHHHHHh
Confidence            7777766643

>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*

Probab=100.00  E-value=1.7e-40  Score=316.63  Aligned_cols=291  Identities=21%  Similarity=0.382  Sum_probs=249.3

Q ss_pred             CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCC---CCeEEEEeCCCcHHhhhCCCcEEE
Q 018512           41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDT---GAVVRGFLGQPQLENALTGMDLVI  115 (354)
Q Consensus        41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~---~~~v~~~~~~~d~~~al~~aDvVI  115 (354)
                      ++|||+|||| |.+|+.++..|+..++..+|+|+|+++  .++.+.|+.+...   ...+..   +++ .+++++||+||
T Consensus         6 ~~mkI~IiGa-G~vG~~~a~~l~~~g~~~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~~v~~---~~~-~~~~~~aD~Vi   80 (319)
T 1lld_A            6 KPTKLAVIGA-GAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDG---SDD-PEICRDADMVV   80 (319)
T ss_dssp             -CCEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGGGSTTCEEEE---ESC-GGGGTTCSEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHhhhhhcCCeEEEe---CCC-HHHhCCCCEEE
Confidence            4589999999 999999999999998877999999986  3445666665431   122332   235 36899999999


Q ss_pred             EcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCCchHHHHHHHHHhCCCCCCCEEEe-ccchHHH
Q 018512          116 IPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVR  194 (354)
Q Consensus       116 i~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~~~~~~~~~~p~~kviG~-t~ld~~r  194 (354)
                      ++++.++++|++|.|++.+|+++++++++.+++++|+++|++++||++..++++    ++.+++|++||+|. |.+++.|
T Consensus        81 i~v~~~~~~g~~r~~~~~~n~~~~~~~~~~i~~~~~~~~vi~~~Np~~~~~~~~----~~~~~~~~~~vig~~~~l~~~r  156 (319)
T 1lld_A           81 ITAGPRQKPGQSRLELVGATVNILKAIMPNLVKVAPNAIYMLITNPVDIATHVA----QKLTGLPENQIFGSGTNLDSAR  156 (319)
T ss_dssp             ECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTSEEEECCSSHHHHHHHH----HHHHTCCTTSEEECTTHHHHHH
T ss_pred             ECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEecCchHHHHHHH----HHhcCCCHHHEeeccccHhHHH
Confidence            999999999999999999999999999999999999999999999999987653    56678999999999 9999999


Q ss_pred             HHHHHHHHhCCCCCCCcceEEeecCCccccccccccCCCC-----------C--CChHHHHHHHHHHhcchhHHHhhhcc
Q 018512          195 ANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPC-----------S--FTQEETEYLTNRIQNGGTEVVEAKAG  261 (354)
Q Consensus       195 ~~~~la~~l~v~~~~v~~~v~G~hg~~~~vp~~s~~~v~~-----------~--~~~~~~~~i~~~v~~~~~~i~~~~~~  261 (354)
                      ++..+++++++++.+++.+++|+|++ +++|.|++..+..           .  ..++.++++.+.+++.+.+|++   .
T Consensus       157 ~~~~~a~~~~v~~~~v~~~~~G~~g~-~~~~~w~k~~in~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~e~~~v~~---~  232 (319)
T 1lld_A          157 LRFLIAQQTGVNVKNVHAYIAGEHGD-SEVPLWESATIGGVPMSDWTPLPGHDPLDADKREEIHQEVKNAAYKIIN---G  232 (319)
T ss_dssp             HHHHHHHHHTCCGGGEECCEEBSSST-TCEECTTSCEETTEEGGGCCCCTTCCCCCHHHHHHHHHHHHHHHHHHHT---S
T ss_pred             HHHHHHHHhCCCHHHeEEEEEeCCCC-ceeeeeecceECCccHHHHHhccccccCCHHHHHHHHHHHHHhhHhhhh---C
Confidence            99999999999999999999999999 8999999976531           1  2333478888889999999988   4


Q ss_pred             CCcchhhHHHHHHHHHHHHHhccCCCCcEEEee-eeeccC-CCccEEEEeEEEcCCCeEEeccCCCCCHHHHHHHHHHHH
Q 018512          262 AGSATLSMAYAAVKFADACLRGLRGDAGVVECA-FVASQV-TELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKK  339 (354)
Q Consensus       262 kg~~~~s~A~a~~~ii~si~~~~~~~~~v~~~~-~~~g~~-~~~~~~svPv~ig~~Gv~~i~~~~~L~~~E~~~l~~sa~  339 (354)
                      +|++.|++|.+.++++++|+++.+   .+++++ +++|.| ..+.++|+|+.++++|+++++++ +|+++|+++|++|++
T Consensus       233 ~G~~~~~~a~~~~sm~~di~~~~~---~ei~~s~~~~G~~~~~~~~~gvp~~~~~~Gv~~i~~~-~l~~~e~~~l~~s~~  308 (319)
T 1lld_A          233 KGATNYAIGMSGVDIIEAVLHDTN---RILPVSSMLKDFHGISDICMSVPTLLNRQGVNNTINT-PVSDKELAALKRSAE  308 (319)
T ss_dssp             CCSCCHHHHHHHHHHHHHHHTTCC---EEEEEEEECSSBTTBCSSEEEEEEEEETTEEECCSCC-CCCHHHHHHHHHHHH
T ss_pred             CCCchHHHHHHHHHHHHHHHcCCC---cEEEEEEEecCcCCccceEEEEEEEEeCCeeEEEcCC-CCCHHHHHHHHHHHH
Confidence            578889999999999999999865   367776 779998 57899999999999999999995 999999999999999


Q ss_pred             HHHHHHHHh
Q 018512          340 ELAGSIQKG  348 (354)
Q Consensus       340 ~i~~~~~~~  348 (354)
                      .|++.++..
T Consensus       309 ~l~~~~~~~  317 (319)
T 1lld_A          309 TLKETAAQF  317 (319)
T ss_dssp             HHHHHHHTT
T ss_pred             HHHHHHHHh
Confidence            999998754

>1u8x_X Maltose-6'-phosphate glucosidase; structural genomics, PSI, protein structure initiative, MCSG glucosidase, NAD-dependent; HET: G6P NAD; 2.05A {Bacillus subtilis} SCOP: c.2.1.5 d.162.1.2

Probab=100.00  E-value=5.4e-40  Score=327.88  Aligned_cols=291  Identities=15%  Similarity=0.178  Sum_probs=218.8

Q ss_pred             CCeEEEEcCCCch-HHHHHHHHHhC--CC-CcEEEEEecCC--chhHHHHHhcC-----CCCCeEEEEeCCCcHHhhhCC
Q 018512           42 GFKVAILGAAGGI-GQPLAMLMKIN--PL-VSVLHLYDVVN--TPGVTADISHM-----DTGAVVRGFLGQPQLENALTG  110 (354)
Q Consensus        42 ~~kI~IiGa~G~v-G~~~a~~l~~~--~~-~~ei~L~D~~~--~~g~~~dl~~~-----~~~~~v~~~~~~~d~~~al~~  110 (354)
                      .+||+|||| |++ +.+++..|+.+  ++ ..+|+|+|+++  +++ ..|+.+.     .....++.   ++|+++|++|
T Consensus        28 ~~KIaVIGa-Gsv~~~ala~~L~~~~~~l~~~eV~L~Di~~e~~~~-~~~~~~~~l~~~~~~~~I~~---t~D~~eal~~  102 (472)
T 1u8x_X           28 SFSIVIAGG-GSTFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDR-IAGACDVFIREKAPDIEFAA---TTDPEEAFTD  102 (472)
T ss_dssp             CEEEEEECT-TSSSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHH-HHHHHHHHHHHHCTTSEEEE---ESCHHHHHSS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHhCCCCCCCCEEEEEeCCHHHHHH-HHHHHHHHhccCCCCCEEEE---ECCHHHHHcC
Confidence            469999999 888 55677778776  66 78999999987  333 2344332     12344554   4688899999


Q ss_pred             CcEEEEcCCCCCCCCCCH--------------------HHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCCchHHHH
Q 018512          111 MDLVIIPAGVPRKPGMTR--------------------DDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAA  170 (354)
Q Consensus       111 aDvVIi~ag~~~~~g~~r--------------------~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~  170 (354)
                      ||+||++++.++++|++|                    .+++.+|+++++++++.|+++||+||+|++|||+|++|++  
T Consensus       103 AD~VViaag~~~~~g~~rd~~ip~k~g~~~~eT~G~ggl~~~~rni~i~~~i~~~i~~~~P~A~ii~~TNPvdi~T~~--  180 (472)
T 1u8x_X          103 VDFVMAHIRVGKYAMRALDEQIPLKYGVVGQETCGPGGIAYGMRSIGGVLEILDYMEKYSPDAWMLNYSNPAAIVAEA--  180 (472)
T ss_dssp             CSEEEECCCTTHHHHHHHHHHHHHTTTCCCCSSSHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCSCHHHHHHH--
T ss_pred             CCEEEEcCCCccccccchhhhhhhhcCcccccccCchhHHHHhhhHHHHHHHHHHHHHHCCCeEEEEeCCcHHHHHHH--
Confidence            999999999987777776                    4458999999999999999999999999999999998754  


Q ss_pred             HHHHHhCCCCCCCEEEeccchHHHHHHHHHHHhCCCC-CCCcceEEe-----------e-cCCccccccccccCC-----
Q 018512          171 EVFKKAGTYDPKKLLGVTMLDVVRANTFVAEVLGLDP-RDVDVPVVG-----------G-HAGVTILPLLSQVKP-----  232 (354)
Q Consensus       171 ~~~~~~~~~p~~kviG~t~ld~~r~~~~la~~l~v~~-~~v~~~v~G-----------~-hg~~~~vp~~s~~~v-----  232 (354)
                        +++.+  |+.||||+|... .|+++.+|+.+|+++ ++|+++++|           + ||+ +++|.||...+     
T Consensus       181 --~~k~~--p~~rViG~c~~~-~r~~~~la~~lgv~~~~~v~~~v~GlNH~~W~~~~~~~hG~-d~~p~~~~~~~~~g~~  254 (472)
T 1u8x_X          181 --TRRLR--PNSKILNICDMP-VGIEDRMAQILGLSSRKEMKVRYYGLNHFGWWTSIQDQEGN-DLMPKLKEHVSQYGYI  254 (472)
T ss_dssp             --HHHHS--TTCCEEECCSHH-HHHHHHHHHHHTCSCGGGEEEEEEEETTEEEEEEEEETTCC-BCHHHHHHHHHHHSSC
T ss_pred             --HHHhC--CCCCEEEeCCcH-HHHHHHHHHHhCcCchhceeEEEeccchhhheeeeEeCCCC-EehHhHHHHHHhcCCC
Confidence              57765  788999998654 499999999999998 999999999           8 999 99999987321     


Q ss_pred             C--------CCCChHH--------------------H----HHHHH----------HHhc-chhHHHhhhc-c--CC---
Q 018512          233 P--------CSFTQEE--------------------T----EYLTN----------RIQN-GGTEVVEAKA-G--AG---  263 (354)
Q Consensus       233 ~--------~~~~~~~--------------------~----~~i~~----------~v~~-~~~~i~~~~~-~--kg---  263 (354)
                      +        .++..+-                    +    +++.+          ++++ ...++++... +  ++   
T Consensus       255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~Yl~yy~~~~~~~e~~~~~~~r~~~v~~~~~~~~~~~~~~~~~~~~~~  334 (472)
T 1u8x_X          255 PKTEAEAVEASWNDTFAKARDVQAADPDTLPNTYLQYYLFPDDMVKKSNPNHTRANEVMEGREAFIFSQCDMITREQSSE  334 (472)
T ss_dssp             CCC-------CTTSHHHHHHHHHHTSTTSEECGGGHHHHSHHHHHTTSCSSSCHHHHHHHHTTTTTTTTHHHHHHHTSCC
T ss_pred             ccccccccccchHHHHHhhcCccccccccCCccchhcccCCHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhhhhcCCcc
Confidence            1        0111010                    0    11111          1112 2222222100 2  34   


Q ss_pred             cchh---hHHHHHHHHHHHHHhccCCCCcEEEee-eeeccC---CCccEEEEeEEEcCCCeEEeccCCCCCHHHHHHHHH
Q 018512          264 SATL---SMAYAAVKFADACLRGLRGDAGVVECA-FVASQV---TELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEK  336 (354)
Q Consensus       264 ~~~~---s~A~a~~~ii~si~~~~~~~~~v~~~~-~~~g~~---~~~~~~svPv~ig~~Gv~~i~~~~~L~~~E~~~l~~  336 (354)
                      ++.|   +++.++++++++|++|++   .+++++ ..+|.|   |+|+++|+||+||++|++++... +|+++|+++++.
T Consensus       335 ~~~~~~~~~~~~a~~ii~AI~~d~~---~v~~vsv~n~G~i~glp~d~~veVP~vvg~~Gi~pi~~~-~Lp~~~~~l~~~  410 (472)
T 1u8x_X          335 NSEIKIDDHASYIVDLARAIAYNTG---ERMLLIVENNGAIANFDPTAMVEVPCIVGSNGPEPITVG-TIPQFQKGLMEQ  410 (472)
T ss_dssp             SCSSCCCTTTHHHHHHHHHHHHTCC---EEEEEEEECTTSBTTSCTTSEEEEEEEEETTEEEECCCB-CCCHHHHHHHHH
T ss_pred             cccccccHHHHHHHHHHHHHhcCCC---eEEEEEeecCceecCcCCCeEEEEeEEEcCCCceEeecC-CCCHHHHHHHHH
Confidence            3444   899999999999999976   488887 568987   58999999999999999999985 999999999998


Q ss_pred             HHHHHHHHHHHhh
Q 018512          337 AKKELAGSIQKGI  349 (354)
Q Consensus       337 sa~~i~~~~~~~~  349 (354)
                      -...-+-.++.++
T Consensus       411 ~~~~e~l~veAa~  423 (472)
T 1u8x_X          411 QVSVEKLTVEAWA  423 (472)
T ss_dssp             HHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHH
Confidence            7766665555554

>3fef_A Putative glucosidase LPLD; gulosidase, structural genomics, unknown function, glycosidase, hydrolase, manganese, metal-binding, NAD, PSI- 2; 2.20A {Bacillus subtilis}

Probab=99.98  E-value=1.6e-31  Score=264.65  Aligned_cols=292  Identities=18%  Similarity=0.207  Sum_probs=197.1

Q ss_pred             CCCeEEEEcCCCch--HHHHHHHHHhCC-CCcEEEEEecCCch-hHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEE
Q 018512           41 AGFKVAILGAAGGI--GQPLAMLMKINP-LVSVLHLYDVVNTP-GVTADISHMDTGAVVRGFLGQPQLENALTGMDLVII  116 (354)
Q Consensus        41 ~~~kI~IiGa~G~v--G~~~a~~l~~~~-~~~ei~L~D~~~~~-g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi  116 (354)
                      +.+||+|||| |++  |..++..|+... +..+|+|+|+++.. .....+.+.......+. ..|+|+++|++||||||+
T Consensus         4 ~~~KIaVIGa-Gs~g~g~~la~~l~~~~~~~geV~L~Di~~e~le~~~~~~~~l~~~~~~I-~~TtD~~eAl~dADfVI~   81 (450)
T 3fef_A            4 DQIKIAYIGG-GSQGWARSLMSDLSIDERMSGTVALYDLDFEAAQKNEVIGNHSGNGRWRY-EAVSTLKKALSAADIVII   81 (450)
T ss_dssp             CCEEEEEETT-TCSSHHHHHHHHHHHCSSCCEEEEEECSSHHHHHHHHHHHTTSTTSCEEE-EEESSHHHHHTTCSEEEE
T ss_pred             CCCEEEEECC-ChhHhHHHHHHHHHhccccCCeEEEEeCCHHHHHHHHHHHHHHhccCCeE-EEECCHHHHhcCCCEEEe
Confidence            4579999999 998  467777777644 33499999998611 11111111111123333 235789999999999999


Q ss_pred             cCC------------CCCCCCCCHH----------HHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCCchHHHHHHHH
Q 018512          117 PAG------------VPRKPGMTRD----------DLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFK  174 (354)
Q Consensus       117 ~ag------------~~~~~g~~r~----------d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~~~~~  174 (354)
                      +..            .|+++|+.+.          ....+|+++++++++.|+++||+||+|++|||+|++|++    ++
T Consensus        82 airvG~~~~~~~De~ip~k~G~~~~vget~g~GGi~~alr~~~i~~~i~~~i~~~~p~a~~i~~tNPvdi~t~~----~~  157 (450)
T 3fef_A           82 SILPGSLDDMEVDVHLPERCGIYQSVGDTVGPGGIIRGLRAVPIFAEIARAIRDYAPESWVINYTNPMSVCTRV----LY  157 (450)
T ss_dssp             CCCSSCHHHHHHHHHGGGGGTCCCSSCSSSHHHHHHHHHHHHHHHHHHHHHHHHHCTTSEEEECCSSHHHHHHH----HH
T ss_pred             ccccCCcccchhhhhhhhccCccccchhhcCCchhhcccccHHHHHHHHHHHHHHCCCeEEEEecCchHHHHHH----HH
Confidence            875            4778887544          355699999999999999999999999999999999764    46


Q ss_pred             HhCCCCCCCEEEeccchHHHHHHHHHHHh----C---CCCCCCcceEEe-ecCC---------cccccc-----------
Q 018512          175 KAGTYDPKKLLGVTMLDVVRANTFVAEVL----G---LDPRDVDVPVVG-GHAG---------VTILPL-----------  226 (354)
Q Consensus       175 ~~~~~p~~kviG~t~ld~~r~~~~la~~l----~---v~~~~v~~~v~G-~hg~---------~~~vp~-----------  226 (354)
                      +.  +|+.||||+|+.. .++++.+|+.+    |   +++++|+..++| ||..         .+.+|.           
T Consensus       158 k~--~p~~rviG~C~~~-~~~~~~~a~~l~~~lg~~~~~~~~v~~~~~GlNH~~w~~~~~~~G~d~~p~l~~~~~~~~~~  234 (450)
T 3fef_A          158 KV--FPGIKAIGCCHEV-FGTQKLLAEMVTERLGIEVPRREDIRVNVLGINHFTWITKASYRHIDLLPIFREFSAHYGES  234 (450)
T ss_dssp             HH--CTTCEEEECCSHH-HHHHHHHHHHHHHHHCCCCSCGGGEEEEEEEETTEEEEEEEEETTEEHHHHHHHHHHHHTTT
T ss_pred             HH--CCCCCEEEeCCcH-HHHHHHHHHHHHhhcCCCCCChhHeEEEEeeecCeEeEEEEEECCEEChHHHHHHHHhhccc
Confidence            65  6889999999875 68999999999    5   779999999999 6643         123331           


Q ss_pred             --------cccc-----------------------------CCCCCC-----------ChHHHHHHHHHHhcchhHHHhh
Q 018512          227 --------LSQV-----------------------------KPPCSF-----------TQEETEYLTNRIQNGGTEVVEA  258 (354)
Q Consensus       227 --------~s~~-----------------------------~v~~~~-----------~~~~~~~i~~~v~~~~~~i~~~  258 (354)
                              |...                             +.+..|           +...+..  +++.+...+..+.
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~h~~ey~p~~Y~~~~~~~~~~~~~~~~r~--~~~~~~~~~~~~~  312 (450)
T 3fef_A          235 GYELEGECWRDSVFCSAHRVAFDLFETYGAIPAAGDRHLAEFLPGPYLKQPEVWKFHLTPISFRK--QDRAEKRQETERL  312 (450)
T ss_dssp             CCCCTTCCTTSCTTCCCSHHHHHHHHHHSSEECSCHHHHTTSSCSSGGGCTTTTTCCCCCHHHHH--HHHHHHHHHHHHH
T ss_pred             ccccccccccccccchhhHHHHHHHHHcCCcccccccchhcccchhhcCCHHHhcccccchhhHH--HHHHHHHHHHHHH
Confidence                    1100                             000000           0000100  0000000011000


Q ss_pred             hcc-C--CcchhhHHHHHHHHHHHHHhccCCCCcEEEee-eeeccC---CCccEEEEeEEEcCCCeEEeccCCCCCHHHH
Q 018512          259 KAG-A--GSATLSMAYAAVKFADACLRGLRGDAGVVECA-FVASQV---TELPFFASKVRLGRQGAEEIFQLGPLNEYER  331 (354)
Q Consensus       259 ~~~-k--g~~~~s~A~a~~~ii~si~~~~~~~~~v~~~~-~~~g~~---~~~~~~svPv~ig~~Gv~~i~~~~~L~~~E~  331 (354)
                      ..+ +  ....+  +.++++++++|++|++   .+++++ ..+|.|   |+|+++|+||++|++|+.++.. ++|+++++
T Consensus       313 ~~~~~~~~~~~~--~e~~~~ii~aI~~d~~---~~~~vnv~n~G~i~~lp~d~~vevP~~v~~~Gi~pi~~-g~Lp~~~~  386 (450)
T 3fef_A          313 IVQQRGVAEKAS--GEEGVNIIAALLGLGE---LVTNVNMPNQGQVLNLPIQAIVETNAFITRNRVQPILS-GALPKGVE  386 (450)
T ss_dssp             HHTTCCCCCSCC--SCCHHHHHHHHTTSCC---EEEEEEEECSSSSTTSCTTSEEEEEEEEETTEEEEBCC-CCCCHHHH
T ss_pred             hcCCcCcCcCcc--HHHHHHHHHHHHcCCC---eEEEEEeecCcEecCCCCCeEEEEEEEEcCCCceeccc-CCCCHHHH
Confidence            000 0  00011  2457899999999976   488887 468987   6899999999999999999987 59999999


Q ss_pred             HHHHHHHHHHHHHHHHhh
Q 018512          332 IGLEKAKKELAGSIQKGI  349 (354)
Q Consensus       332 ~~l~~sa~~i~~~~~~~~  349 (354)
                      ++++.-...-+-.++.++
T Consensus       387 ~l~~~~~~~e~l~veAa~  404 (450)
T 3fef_A          387 MLAARHISNQEAVADAGL  404 (450)
T ss_dssp             HHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHH
Confidence            999887666555555554

>1obb_A Maltase, alpha-glucosidase; glycosidase, sulfinic acid, NAD+, maltose, hydrolase; HET: MAL NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2

Probab=99.97  E-value=1.5e-29  Score=252.38  Aligned_cols=290  Identities=18%  Similarity=0.155  Sum_probs=192.7

Q ss_pred             CCeEEEEcCCCchHHH--HHHHHHhC-CC-CcEEEEEecCC--chhHHHHHh-----cCCCCCeEEEEeCCCcHHhhhCC
Q 018512           42 GFKVAILGAAGGIGQP--LAMLMKIN-PL-VSVLHLYDVVN--TPGVTADIS-----HMDTGAVVRGFLGQPQLENALTG  110 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~--~a~~l~~~-~~-~~ei~L~D~~~--~~g~~~dl~-----~~~~~~~v~~~~~~~d~~~al~~  110 (354)
                      ++||+|||| |+||.+  ++..|+.. ++ ..+|+|+|+++  +++ +.++.     +......++.   ++|+++|++|
T Consensus         3 ~~KIaVIGA-GsVg~g~ala~~La~~~~l~~~eV~L~Di~~e~l~~-~~~~~~~~l~~~~~~~~I~~---ttD~~eal~d   77 (480)
T 1obb_A            3 SVKIGIIGA-GSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDA-ILTIAKKYVEEVGADLKFEK---TMNLDDVIID   77 (480)
T ss_dssp             CCEEEEETT-TCHHHHHHHHHHHHTCGGGTTCEEEEECSCHHHHHH-HHHHHHHHHHHTTCCCEEEE---ESCHHHHHTT
T ss_pred             CCEEEEECC-CchHHHHHHHHHHHhcCcCCCCEEEEEeCCHHHHHH-HHHHHHHHhccCCCCcEEEE---ECCHHHHhCC
Confidence            579999999 998654  46677643 33 56999999987  233 22221     1222234443   4688899999


Q ss_pred             CcEEEEcCCC------------CCCCCCCH--HH------------HHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCC
Q 018512          111 MDLVIIPAGV------------PRKPGMTR--DD------------LFNINAGIVRTLCEGIAKCCPNATVNLISNPVNS  164 (354)
Q Consensus       111 aDvVIi~ag~------------~~~~g~~r--~d------------~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv~~  164 (354)
                      ||+||++++.            |.++|+.+  .|            ++.+|+++++++++.|+++||+||+|++|||+|+
T Consensus        78 AD~VIiaagv~~~~~~~~dE~ip~K~g~~~~l~dt~g~g~~~~G~~~~~rni~i~~~i~~~i~~~~P~A~ii~~TNPvdi  157 (480)
T 1obb_A           78 ADFVINTAMVGGHTYLEKVRQIGEKYGYYRGIDAQEFNMVSDYYTFSNYNQLKYFVDIARKIEKLSPKAWYLQAANPIFE  157 (480)
T ss_dssp             CSEEEECCCTTHHHHHHHHHHHHHHTTCTTCTTCBTTBCCTTCCSSSCHHHHHHHHHHHHHHHHHCTTCEEEECSSCHHH
T ss_pred             CCEEEECCCcccccccccccccccccccccchhhhcCCccchhhhHHhhhhHHHHHHHHHHHHHHCCCeEEEEeCCcHHH
Confidence            9999999986            34555544  33            4789999999999999999999999999999999


Q ss_pred             chHHHHHHHHHhCCCCCCCEEEeccchHHHHHHHHHHHhCCCCCCCcceEEe-ecCC---------ccccc---------
Q 018512          165 TVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVVG-GHAG---------VTILP---------  225 (354)
Q Consensus       165 ~~~~~~~~~~~~~~~p~~kviG~t~ld~~r~~~~la~~l~v~~~~v~~~v~G-~hg~---------~~~vp---------  225 (354)
                      +|++    +++   +|+.||||+|.++. ++++++ +.+|+++++|+++++| +|..         ++.+|         
T Consensus       158 ~t~~----~~k---~p~~rviG~c~~~~-~~~~~l-~~lgv~~~~v~~~v~GlNH~~w~~~~~~~G~D~~p~l~~~~~~~  228 (480)
T 1obb_A          158 GTTL----VTR---TVPIKAVGFCHGHY-GVMEIV-EKLGLEEEKVDWQVAGVNHGIWLNRFRYNGGNAYPLLDKWIEEK  228 (480)
T ss_dssp             HHHH----HHH---HSCSEEEEECSGGG-HHHHHH-HHTTCCGGGEEEEEEEETTEEEEEEEEETTEECHHHHHHHHHHT
T ss_pred             HHHH----HHH---CCCCcEEecCCCHH-HHHHHH-HHhCCCHHHceEEEEeecchhhhhheeeCCeEcHHHHHHHHHcc
Confidence            9754    466   68899999975444 478999 9999999999999999 4422         11111         


Q ss_pred             --------cccc--cC-----------CCC-------CCC------h------------------HH----HHHHHHHHh
Q 018512          226 --------LLSQ--VK-----------PPC-------SFT------Q------------------EE----TEYLTNRIQ  249 (354)
Q Consensus       226 --------~~s~--~~-----------v~~-------~~~------~------------------~~----~~~i~~~v~  249 (354)
                              .|+.  ..           +|.       .+.      .                  .+    +.+......
T Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~h~~~y~~~~~~~~~~yyy~~~~~~~~~~~~~~~~~~~~~e~~~~~e  308 (480)
T 1obb_A          229 SKDWKPENPFNDQLSPAAIDMYRFYGVMPIGDTVRNSSWRYHRDLETKKKWYGEPWGGADSEIGWKWYQDTLGKVTEITK  308 (480)
T ss_dssp             GGGCCCSSTTCCTTSHHHHHHHHHHSSCEEGGGTTSCCGGGGSSHHHHHHHHCTTTTSTTSHHHHHHHHHHHHHHHHHHH
T ss_pred             CccccccccccchhhhHHHHHHHhcCCeecCCCCCCcCcccccccCccccccchhhcccccccccHhHHHHHHHHHHHHH
Confidence                    1322  10           111       111      1                  01    111111111


Q ss_pred             cchhHHHhhhccCC--------cchh----------------hHHHHHHHHHHHHHhccCCCCcEEEeee-eeccC---C
Q 018512          250 NGGTEVVEAKAGAG--------SATL----------------SMAYAAVKFADACLRGLRGDAGVVECAF-VASQV---T  301 (354)
Q Consensus       250 ~~~~~i~~~~~~kg--------~~~~----------------s~A~a~~~ii~si~~~~~~~~~v~~~~~-~~g~~---~  301 (354)
                      +.-+++.+...-++        .++|                ..+..++++++||++|++.   ++.+++ .+|.+   |
T Consensus       309 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ge~a~~ii~ai~~~~~~---~~~vnv~N~G~I~~lp  385 (480)
T 1obb_A          309 KVAKFIKENPSVRLSDLGSVLGKDLSEKQFVLEVEKILDPERKSGEQHIPFIDALLNDNKA---RFVVNIPNKGIIHGID  385 (480)
T ss_dssp             HHHHHHHHCTTCCGGGCSSSSCCSHHHHHHHHHHHHHHCTTCCCSCSHHHHHHHHHHCCCE---EEEEEEECTTSSTTSC
T ss_pred             HHHHHHhcCCccccccccccccccccccccccccccccccchhhhHHHHHHHHHHHhCCCe---EEEEEeeCCceeCCCC
Confidence            11122222110001        1111                1125678999999999763   666665 46765   8


Q ss_pred             CccEEEEeEEEcCCCeEEeccCCC-CCHHHHHH-HHHHHHHHHHHHHHhh
Q 018512          302 ELPFFASKVRLGRQGAEEIFQLGP-LNEYERIG-LEKAKKELAGSIQKGI  349 (354)
Q Consensus       302 ~~~~~svPv~ig~~Gv~~i~~~~~-L~~~E~~~-l~~sa~~i~~~~~~~~  349 (354)
                      +|+++++||+++++|+.++.. ++ |++..+++ ++.-...-+-.++.++
T Consensus       386 ~d~vVEvp~~v~~~G~~p~~~-g~~lP~~~~~l~~~~~~~~e~l~veA~~  434 (480)
T 1obb_A          386 DDVVVEVPALVDKNGIHPEKI-EPPLPDRVVKYYLRPRIMRMEMALEAFL  434 (480)
T ss_dssp             TTSEEEEEEEEETTEEEECCC-SSCCCHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred             CCeEEEEEEEEcCCCCEeecc-CCCCCHHHHhHHHHHHHHHHHHHHHHHH
Confidence            899999999999999999877 58 99999999 7776655555555443

>3u95_A Glycoside hydrolase, family 4; hydrolysis, cytosol; 2.00A {Thermotoga neapolitana} PDB: 1vjt_A*

Probab=99.96  E-value=1.5e-29  Score=253.34  Aligned_cols=167  Identities=23%  Similarity=0.235  Sum_probs=125.0

Q ss_pred             CeEEEEcCCCchHHHH--HHHHHhCC----CCcEEEEEecCC--chhHHHHHhcCC--CCCeEEEEeCCCcHHhhhCCCc
Q 018512           43 FKVAILGAAGGIGQPL--AMLMKINP----LVSVLHLYDVVN--TPGVTADISHMD--TGAVVRGFLGQPQLENALTGMD  112 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~--a~~l~~~~----~~~ei~L~D~~~--~~g~~~dl~~~~--~~~~v~~~~~~~d~~~al~~aD  112 (354)
                      |||+|||| |++|++.  ...++...    ..++|+|+|+++  +++...++.+..  ....++.. .++|+++|++|||
T Consensus         1 mKI~iIGa-Gs~~~t~~l~~~~~~~~~l~~~~~ei~L~Di~~~rl~~~~~~~~~~~~~~~~~~~i~-~t~d~~eAl~gAD   78 (477)
T 3u95_A            1 MKISIVGA-GSVRFALQLVEDIAQTDELSREDTHIYLMDVHERRLNASYILARKYVEELNSPVKVV-KTESLDEAIEGAD   78 (477)
T ss_dssp             CEEEEETT-TSHHHHHHHHHHHHTCTTTCSTTCEEEEECSCHHHHHHHHHHHHHHHHHHTCCCEEE-EESCHHHHHTTCS
T ss_pred             CEEEEECC-CchhhHHHHHHHHHhhHhcCCCCCEEEEECCCHHHHHHHHHHHHHHHHHcCCCeEEE-EeCCHHHHhCCCC
Confidence            79999999 9998774  33455432    346999999987  455555555532  12223332 2578899999999


Q ss_pred             EEEEcCCC-------------------CCCCCCCHHHH---------------HHHHHHHHHHHHHHHhhhCCCeEEEEe
Q 018512          113 LVIIPAGV-------------------PRKPGMTRDDL---------------FNINAGIVRTLCEGIAKCCPNATVNLI  158 (354)
Q Consensus       113 vVIi~ag~-------------------~~~~g~~r~d~---------------~~~n~~~~~~i~~~i~~~~p~a~viv~  158 (354)
                      |||+++|.                   |+|+|++|.++               ..+|++++.++++.|+++||+||+||+
T Consensus        79 ~Vi~~~g~~~~Rvg~~~~r~~de~~~ip~k~G~~~~~l~qet~g~gG~~~~lR~~~~i~v~~~i~~~i~~~~P~A~~in~  158 (477)
T 3u95_A           79 FIINTAYPYDPRYHDSGSQRWDEVTKVGEKHGYYRGIDSQELNMVSTYTYVLSSYPDVKLALEIAEKMKKMAPKAYLMQT  158 (477)
T ss_dssp             EEEECCCCCCTTTCSSHHHHHHHHHHHHHHTTCTTCTTCBTTBCCTTSCSTTTTHHHHHHHHHHHHHHHHHCTTCEEEEC
T ss_pred             EEEECcccccccccccccccceeeeccCcccceeecccccccCCccchhHHHhhhhhHHHHHHHHHHHHhhCCCeEEEEe
Confidence            99999874                   23566555443               136899999999999999999999999


Q ss_pred             cCCCCCchHHHHHHHHHhCCCCCCCEEEeccchHHHHHHHHHHHhCCCCCCCcceEEeecCC
Q 018512          159 SNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAG  220 (354)
Q Consensus       159 tNPv~~~~~~~~~~~~~~~~~p~~kviG~t~ld~~r~~~~la~~l~v~~~~v~~~v~G~hg~  220 (354)
                      |||++++|+.    ++++++   .|++|+|+-...  ...+++.||+++++|+..+.|-|+.
T Consensus       159 tNP~~i~t~a----~~~~~~---~k~vGlC~~~~~--~~~~~~~Lg~~~~~v~~~~~GlNH~  211 (477)
T 3u95_A          159 ANPVFEITQA----VRRWTG---ANIIGFCHGVAG--VYEVFERLGLDPEEVDWQVAGVNHG  211 (477)
T ss_dssp             SSCHHHHHHH----HHHHHC---CCEEEECCGGGH--HHHHHHHTTCCGGGEEEEEEEETTE
T ss_pred             cChHHHHHHH----HHHhCC---CCeEEECCCHHH--HHHHHHHhCCCHHHcEEEEeecCCC
Confidence            9999999754    467655   589999975443  3557788999999999999996654

>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*

Probab=98.78  E-value=8.6e-09  Score=97.68  Aligned_cols=120  Identities=16%  Similarity=0.165  Sum_probs=85.8

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--c-hhH--H----HHHhcCC---C--C-----CeEEEEeCCC
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--T-PGV--T----ADISHMD---T--G-----AVVRGFLGQP  102 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~-~g~--~----~dl~~~~---~--~-----~~v~~~~~~~  102 (354)
                      ..||+|||| |.+|+.+|..++..|+  +|+|+|+++  . .+.  +    ..+....   .  .     ..+..   ++
T Consensus         6 ~~~VaViGa-G~MG~giA~~~a~~G~--~V~l~D~~~~~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~l~~i~~---~~   79 (319)
T 3ado_A            6 AGDVLIVGS-GLVGRSWAMLFASGGF--RVKLYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISS---CT   79 (319)
T ss_dssp             -CEEEEECC-SHHHHHHHHHHHHTTC--CEEEECSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEE---EC
T ss_pred             CCeEEEECC-cHHHHHHHHHHHhCCC--eEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCCccCHHHHHhhccc---cc
Confidence            359999999 9999999999999999  999999986  1 111  1    1121111   0  0     12333   46


Q ss_pred             cHHhhhCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecCCCCCchHHHHHHHHHhCCCCC
Q 018512          103 QLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNSTVPIAAEVFKKAGTYDP  181 (354)
Q Consensus       103 d~~~al~~aDvVIi~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~-p~a~viv~tNPv~~~~~~~~~~~~~~~~~p~  181 (354)
                      |+.+++++||+||.++              .+|+++.+++.+++.+++ |++  |++||.+.+...-+    ...... |
T Consensus        80 ~l~~a~~~ad~ViEav--------------~E~l~iK~~lf~~l~~~~~~~a--IlaSNTSsl~is~i----a~~~~~-p  138 (319)
T 3ado_A           80 NLAEAVEGVVHIQECV--------------PENLDLKRKIFAQLDSIVDDRV--VLSSSSSCLLPSKL----FTGLAH-V  138 (319)
T ss_dssp             CHHHHTTTEEEEEECC--------------CSCHHHHHHHHHHHHTTCCSSS--EEEECCSSCCHHHH----HTTCTT-G
T ss_pred             chHhHhccCcEEeecc--------------ccHHHHHHHHHHHHHHHhhhcc--eeehhhhhccchhh----hhhccC-C
Confidence            8888999999999984              557889999999999999 577  56899998775332    233333 4


Q ss_pred             CCEEEec
Q 018512          182 KKLLGVT  188 (354)
Q Consensus       182 ~kviG~t  188 (354)
                      +|++|+-
T Consensus       139 ~r~ig~H  145 (319)
T 3ado_A          139 KQCIVAH  145 (319)
T ss_dssp             GGEEEEE
T ss_pred             CcEEEec
Confidence            6888874

>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*

Probab=98.63  E-value=7.7e-08  Score=91.05  Aligned_cols=159  Identities=16%  Similarity=0.156  Sum_probs=99.2

Q ss_pred             CCCCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEE-EeCCCcHHhhhCCCcEEEE
Q 018512           38 GGAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRG-FLGQPQLENALTGMDLVII  116 (354)
Q Consensus        38 ~~~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~-~~~~~d~~~al~~aDvVIi  116 (354)
                      .+.+.|||.|+||+|++|++++..|+..|.  +|+.+|++...      ...   ..+.. +....++.++++++|+||+
T Consensus        15 ~~~~~~~vlVtGatG~iG~~l~~~L~~~G~--~V~~~~r~~~~------~~~---~~~~~Dl~d~~~~~~~~~~~d~vih   83 (347)
T 4id9_A           15 VPRGSHMILVTGSAGRVGRAVVAALRTQGR--TVRGFDLRPSG------TGG---EEVVGSLEDGQALSDAIMGVSAVLH   83 (347)
T ss_dssp             ------CEEEETTTSHHHHHHHHHHHHTTC--CEEEEESSCCS------SCC---SEEESCTTCHHHHHHHHTTCSEEEE
T ss_pred             cccCCCEEEEECCCChHHHHHHHHHHhCCC--EEEEEeCCCCC------CCc---cEEecCcCCHHHHHHHHhCCCEEEE
Confidence            355568999999999999999999999987  89999987532      100   11111 1111235678899999999


Q ss_pred             cCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCC--------CCchHHHHHHHHHhCCCCCCCEEEec
Q 018512          117 PAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPV--------NSTVPIAAEVFKKAGTYDPKKLLGVT  188 (354)
Q Consensus       117 ~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv--------~~~~~~~~~~~~~~~~~p~~kviG~t  188 (354)
                      +|+..........+.+..|+....++++.+.+.+...+|.+.|.-+        ..+        ......++...+|.+
T Consensus        84 ~A~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~V~~SS~~vyg~~~~~~~~~--------~E~~~~~~~~~Y~~s  155 (347)
T 4id9_A           84 LGAFMSWAPADRDRMFAVNVEGTRRLLDAASAAGVRRFVFASSGEVYPENRPEFLPV--------TEDHPLCPNSPYGLT  155 (347)
T ss_dssp             CCCCCCSSGGGHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGTTTTSCSSSSB--------CTTSCCCCCSHHHHH
T ss_pred             CCcccCcchhhHHHHHHHHHHHHHHHHHHHHHcCCCeEEEECCHHHhCCCCCCCCCc--------CCCCCCCCCChHHHH
Confidence            9986543333446778899999999999999876665555555111        111        011122333445555


Q ss_pred             cchHHHHHHHHHHHhCCCCCCCc-ceEE
Q 018512          189 MLDVVRANTFVAEVLGLDPRDVD-VPVV  215 (354)
Q Consensus       189 ~ld~~r~~~~la~~l~v~~~~v~-~~v~  215 (354)
                      .....++-..+++..|++..-++ +.++
T Consensus       156 K~~~E~~~~~~~~~~~~~~~ilRp~~v~  183 (347)
T 4id9_A          156 KLLGEELVRFHQRSGAMETVILRFSHTQ  183 (347)
T ss_dssp             HHHHHHHHHHHHHHSSSEEEEEEECEEE
T ss_pred             HHHHHHHHHHHHHhcCCceEEEccceEe
Confidence            55555666666677677655554 4566

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*

Probab=98.59  E-value=1.4e-07  Score=89.34  Aligned_cols=174  Identities=16%  Similarity=0.041  Sum_probs=105.1

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCC---CCeEEEEeC----CCcHHhhhCCCc
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDT---GAVVRGFLG----QPQLENALTGMD  112 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~---~~~v~~~~~----~~d~~~al~~aD  112 (354)
                      +|||.|+||+|++|++++..|+..|.  +|+.+|+..  ......++.....   ...+..+..    ..++.++++++|
T Consensus        25 ~~~vlVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d  102 (351)
T 3ruf_A           25 PKTWLITGVAGFIGSNLLEKLLKLNQ--VVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQVMKGVD  102 (351)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHHHTTTCS
T ss_pred             CCeEEEECCCcHHHHHHHHHHHHCCC--EEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhcCCC
Confidence            46999999999999999999999987  999999875  2222233332110   012222211    123567889999


Q ss_pred             EEEEcCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCCchHHHHHHHHHhCCCCCCCEEEeccc
Q 018512          113 LVIIPAGVPRKP--GMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTML  190 (354)
Q Consensus       113 vVIi~ag~~~~~--g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~~~~~~~~~~p~~kviG~t~l  190 (354)
                      +||++|+.....  .....+.+..|+....++++.+++...+.+|.+.|--+.....  ...+.......+...+|.+..
T Consensus       103 ~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~SS~~vyg~~~--~~~~~E~~~~~p~~~Y~~sK~  180 (351)
T 3ruf_A          103 HVLHQAALGSVPRSIVDPITTNATNITGFLNILHAAKNAQVQSFTYAASSSTYGDHP--ALPKVEENIGNPLSPYAVTKY  180 (351)
T ss_dssp             EEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGTTCC--CSSBCTTCCCCCCSHHHHHHH
T ss_pred             EEEECCccCCcchhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEecHHhcCCCC--CCCCccCCCCCCCChhHHHHH
Confidence            999999854211  1233456788999999999999988766555554421100000  000000011122334455555


Q ss_pred             hHHHHHHHHHHHhCCCCCCCc-ceEEeecC
Q 018512          191 DVVRANTFVAEVLGLDPRDVD-VPVVGGHA  219 (354)
Q Consensus       191 d~~r~~~~la~~l~v~~~~v~-~~v~G~hg  219 (354)
                      ...++-..+++..|++..-++ +.++|...
T Consensus       181 ~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~  210 (351)
T 3ruf_A          181 VNEIYAQVYARTYGFKTIGLRYFNVFGRRQ  210 (351)
T ss_dssp             HHHHHHHHHHHHHCCCCEEEEECSEESTTC
T ss_pred             HHHHHHHHHHHHhCCCEEEEeeCceeCcCC
Confidence            556666677777788766665 56888654

>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}

Probab=98.51  E-value=2.4e-07  Score=87.61  Aligned_cols=172  Identities=13%  Similarity=0.067  Sum_probs=102.1

Q ss_pred             CCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCC----CcHHhhhCC--CcE
Q 018512           40 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQ----PQLENALTG--MDL  113 (354)
Q Consensus        40 ~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~----~d~~~al~~--aDv  113 (354)
                      .++|||.|+||+|++|++++..|+..|...+|+.+|+.........+......+.+..+...    .++.+++++  +|+
T Consensus        22 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~  101 (346)
T 4egb_A           22 SNAMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGNLNNVKSIQDHPNYYFVKGEIQNGELLEHVIKERDVQV  101 (346)
T ss_dssp             --CEEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHHTCCE
T ss_pred             cCCCeEEEECCccHHHHHHHHHHHhhCCCcEEEEEeccccccchhhhhhhccCCCeEEEEcCCCCHHHHHHHHhhcCCCE
Confidence            34579999999999999999999998854488888876521111222222212233332211    234566776  999


Q ss_pred             EEEcCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCC-------CCchHHHHHHHHHhCCCCCCCE
Q 018512          114 VIIPAGVPRKP--GMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPV-------NSTVPIAAEVFKKAGTYDPKKL  184 (354)
Q Consensus       114 VIi~ag~~~~~--g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv-------~~~~~~~~~~~~~~~~~p~~kv  184 (354)
                      ||++|+.....  .....+.+..|+....++++.+++.+...+|.+.|--+       ..+        .......+...
T Consensus       102 Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~SS~~vy~~~~~~~~~--------~E~~~~~p~~~  173 (346)
T 4egb_A          102 IVNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVKKYPHIKLVQVSTDEVYGSLGKTGRF--------TEETPLAPNSP  173 (346)
T ss_dssp             EEECCCCC---------CHHHHHHTHHHHHHHHHHHHSTTSEEEEEEEGGGGCCCCSSCCB--------CTTSCCCCCSH
T ss_pred             EEECCcccchhhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeCchHHhCCCCcCCCc--------CCCCCCCCCCh
Confidence            99999865322  12344567889999999999999886655555444211       011        01111223344


Q ss_pred             EEeccchHHHHHHHHHHHhCCCCCCCc-ceEEeecC
Q 018512          185 LGVTMLDVVRANTFVAEVLGLDPRDVD-VPVVGGHA  219 (354)
Q Consensus       185 iG~t~ld~~r~~~~la~~l~v~~~~v~-~~v~G~hg  219 (354)
                      +|.+.....++-..+++..|++..-++ +.++|...
T Consensus       174 Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~  209 (346)
T 4egb_A          174 YSSSKASADMIALAYYKTYQLPVIVTRCSNNYGPYQ  209 (346)
T ss_dssp             HHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTC
T ss_pred             hHHHHHHHHHHHHHHHHHhCCCEEEEeecceeCcCC
Confidence            555555555666667777787765554 56777543

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}

Probab=98.50  E-value=4.4e-07  Score=84.61  Aligned_cols=165  Identities=16%  Similarity=0.137  Sum_probs=100.1

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEE-EeCCCcHHhhhCCCcEEEEcCCC
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRG-FLGQPQLENALTGMDLVIIPAGV  120 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~-~~~~~d~~~al~~aDvVIi~ag~  120 (354)
                      +|||.|+||+|++|++++..|+..|.  +|+.+++++....   +....   .+.. +. ..++.++++++|+||++|+.
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~---~~~~~---~~~~Dl~-~~~~~~~~~~~d~Vih~a~~   72 (311)
T 3m2p_A            2 SLKIAVTGGTGFLGQYVVESIKNDGN--TPIILTRSIGNKA---INDYE---YRVSDYT-LEDLINQLNDVDAVVHLAAT   72 (311)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESCCC--------CCE---EEECCCC-HHHHHHHTTTCSEEEECCCC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCC--EEEEEeCCCCccc---CCceE---EEEcccc-HHHHHHhhcCCCEEEEcccc
Confidence            36999999999999999999999987  9999999742111   22110   0111 11 23466788999999999886


Q ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCCchHHHHHHHHHhCCCCCCCEEEeccchHHHHHHHHH
Q 018512          121 PRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVA  200 (354)
Q Consensus       121 ~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~~~~~~~~~~p~~kviG~t~ld~~r~~~~la  200 (354)
                      ....  ...+....|+...+++++.+++.+.+.+|.+.|.-+.-...  ...+.......+...+|.+.....++-..++
T Consensus        73 ~~~~--~~~~~~~~n~~~~~~ll~a~~~~~~~r~v~~SS~~vyg~~~--~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~  148 (311)
T 3m2p_A           73 RGSQ--GKISEFHDNEILTQNLYDACYENNISNIVYASTISAYSDET--SLPWNEKELPLPDLMYGVSKLACEHIGNIYS  148 (311)
T ss_dssp             CCSS--SCGGGTHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGCCCGG--GCSBCTTSCCCCSSHHHHHHHHHHHHHHHHH
T ss_pred             CCCC--ChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEccHHHhCCCC--CCCCCCCCCCCCCchhHHHHHHHHHHHHHHH
Confidence            5432  33455688999999999999988766555555422211100  0000001111223345555555556666666


Q ss_pred             HHhCCCCCCCc-ceEEeecC
Q 018512          201 EVLGLDPRDVD-VPVVGGHA  219 (354)
Q Consensus       201 ~~l~v~~~~v~-~~v~G~hg  219 (354)
                      +..|++..-++ ..++|...
T Consensus       149 ~~~g~~~~ilRp~~v~G~~~  168 (311)
T 3m2p_A          149 RKKGLCIKNLRFAHLYGFNE  168 (311)
T ss_dssp             HHSCCEEEEEEECEEECSCC
T ss_pred             HHcCCCEEEEeeCceeCcCC
Confidence            66677655554 46777543

>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*

Probab=98.48  E-value=6.3e-07  Score=93.88  Aligned_cols=120  Identities=16%  Similarity=0.224  Sum_probs=84.8

Q ss_pred             CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC---chhH--H--------HHHhc--CC-CCCeEEEEeCCCcH
Q 018512           41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN---TPGV--T--------ADISH--MD-TGAVVRGFLGQPQL  104 (354)
Q Consensus        41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~---~~g~--~--------~dl~~--~~-~~~~v~~~~~~~d~  104 (354)
                      +-.||+|||| |.+|+.+|..++..|+  +|+|+|+++   ..+.  .        .....  .. ....++.   ++++
T Consensus       315 ~i~~v~ViGa-G~MG~gIA~~~a~aG~--~V~l~D~~~~~l~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~---~~~~  388 (742)
T 3zwc_A          315 PVSSVGVLGL-GTMGRGIAISFARVGI--SVVAVESDPKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLRF---SSST  388 (742)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHTTTC--EEEEECSSHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCCCCEEE---ESCG
T ss_pred             cccEEEEEcc-cHHHHHHHHHHHhCCC--chhcccchHhhhhhHHHHHHHHHHHHHHhccccchhhhhhhhcc---cCcH
Confidence            3469999999 9999999999999999  999999986   1111  0        00111  11 1123443   3454


Q ss_pred             HhhhCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecCCCCCchHHHHHHHHHhCCCCCCC
Q 018512          105 ENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNSTVPIAAEVFKKAGTYDPKK  183 (354)
Q Consensus       105 ~~al~~aDvVIi~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~-p~a~viv~tNPv~~~~~~~~~~~~~~~~~p~~k  183 (354)
                       +++++||+||.+.              .+|+++.+++.+++.+++ |++  |++||.+.+...-+    ...... |+|
T Consensus       389 -~~l~~aDlVIEAV--------------~E~l~iK~~vf~~le~~~~~~a--IlASNTSsl~i~~i----a~~~~~-p~r  446 (742)
T 3zwc_A          389 -KELSTVDLVVEAV--------------FEDMNLKKKVFAELSALCKPGA--FLCTNTSALNVDDI----ASSTDR-PQL  446 (742)
T ss_dssp             -GGGGSCSEEEECC--------------CSCHHHHHHHHHHHHHHSCTTC--EEEECCSSSCHHHH----HTTSSC-GGG
T ss_pred             -HHHhhCCEEEEec--------------cccHHHHHHHHHHHhhcCCCCc--eEEecCCcCChHHH----HhhcCC-ccc
Confidence             6799999999984              467889999999999999 577  66899988765332    233333 468


Q ss_pred             EEEec
Q 018512          184 LLGVT  188 (354)
Q Consensus       184 viG~t  188 (354)
                      ++|+-
T Consensus       447 ~ig~H  451 (742)
T 3zwc_A          447 VIGTH  451 (742)
T ss_dssp             EEEEE
T ss_pred             ccccc
Confidence            88873

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}

Probab=98.45  E-value=3.1e-06  Score=75.64  Aligned_cols=112  Identities=16%  Similarity=0.101  Sum_probs=77.5

Q ss_pred             CCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCC-eEEEEeCCCcHHhhhCCCcEEEEcC
Q 018512           40 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGA-VVRGFLGQPQLENALTGMDLVIIPA  118 (354)
Q Consensus        40 ~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~-~v~~~~~~~d~~~al~~aDvVIi~a  118 (354)
                      -+.|||+|+||+|++|+.++..|+..|.  +|++++++.....  ++.+..  . .+....-+.++.+++.++|+||++|
T Consensus        19 l~~~~ilVtGatG~iG~~l~~~L~~~G~--~V~~~~R~~~~~~--~~~~~~--~~~~~~~Dl~~~~~~~~~~~D~vi~~a   92 (236)
T 3e8x_A           19 FQGMRVLVVGANGKVARYLLSELKNKGH--EPVAMVRNEEQGP--ELRERG--ASDIVVANLEEDFSHAFASIDAVVFAA   92 (236)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESSGGGHH--HHHHTT--CSEEEECCTTSCCGGGGTTCSEEEECC
T ss_pred             cCCCeEEEECCCChHHHHHHHHHHhCCC--eEEEEECChHHHH--HHHhCC--CceEEEcccHHHHHHHHcCCCEEEECC
Confidence            3467999999999999999999999987  9999999763211  122111  1 1111111135578899999999999


Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 018512          119 GVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  159 (354)
Q Consensus       119 g~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~t  159 (354)
                      |....  ......+..|+.....+++.+++.....+|.+.|
T Consensus        93 g~~~~--~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS  131 (236)
T 3e8x_A           93 GSGPH--TGADKTILIDLWGAIKTIQEAEKRGIKRFIMVSS  131 (236)
T ss_dssp             CCCTT--SCHHHHHHTTTHHHHHHHHHHHHHTCCEEEEECC
T ss_pred             CCCCC--CCccccchhhHHHHHHHHHHHHHcCCCEEEEEec
Confidence            86532  3455667789999999999998886554444444

>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*

Probab=98.43  E-value=9.2e-07  Score=82.19  Aligned_cols=167  Identities=17%  Similarity=0.125  Sum_probs=100.3

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEE-E-EeCCCcHHhhhCCCcEEEEcCCC
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVR-G-FLGQPQLENALTGMDLVIIPAGV  120 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~-~-~~~~~d~~~al~~aDvVIi~ag~  120 (354)
                      |||.|+||+|++|++++..|+..|.  +|+.+|++.....  +..+..  .... . +... ++.+++++ |+||++|+.
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~--~~~~~~--~~~~~~Dl~d~-~~~~~~~~-d~vih~A~~   72 (312)
T 3ko8_A            1 MRIVVTGGAGFIGSHLVDKLVELGY--EVVVVDNLSSGRR--EFVNPS--AELHVRDLKDY-SWGAGIKG-DVVFHFAAN   72 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC--EEEEECCCSSCCG--GGSCTT--SEEECCCTTST-TTTTTCCC-SEEEECCSS
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCC--EEEEEeCCCCCch--hhcCCC--ceEEECccccH-HHHhhcCC-CEEEECCCC
Confidence            6999999999999999999999988  9999998652100  011111  1111 0 1111 24566777 999999986


Q ss_pred             CCCC--CCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCCchHHHHHHHHHhCCCCCCCEEEeccchHHHHHHH
Q 018512          121 PRKP--GMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTF  198 (354)
Q Consensus       121 ~~~~--g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~~~~~~~~~~p~~kviG~t~ld~~r~~~~  198 (354)
                      +...  .......+..|+....++++.+++.+...+|.+.|.-+.....  ...+......++...+|.+.....++-..
T Consensus        73 ~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~vyg~~~--~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~  150 (312)
T 3ko8_A           73 PEVRLSTTEPIVHFNENVVATFNVLEWARQTGVRTVVFASSSTVYGDAD--VIPTPEEEPYKPISVYGAAKAAGEVMCAT  150 (312)
T ss_dssp             CSSSGGGSCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCS--SSSBCTTSCCCCCSHHHHHHHHHHHHHHH
T ss_pred             CCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeCcHHHhCCCC--CCCCCCCCCCCCCChHHHHHHHHHHHHHH
Confidence            4321  2335566788999999999999988765555554421100000  00000111223334455555555666677


Q ss_pred             HHHHhCCCCCCCc-ceEEeecC
Q 018512          199 VAEVLGLDPRDVD-VPVVGGHA  219 (354)
Q Consensus       199 la~~l~v~~~~v~-~~v~G~hg  219 (354)
                      +++.+|++..-++ +.++|...
T Consensus       151 ~~~~~g~~~~~lrp~~v~g~~~  172 (312)
T 3ko8_A          151 YARLFGVRCLAVRYANVVGPRL  172 (312)
T ss_dssp             HHHHHCCEEEEEEECEEECTTC
T ss_pred             HHHHhCCCEEEEeeccccCcCC
Confidence            7777787766565 47788643

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}

Probab=98.41  E-value=6.5e-07  Score=84.22  Aligned_cols=114  Identities=21%  Similarity=0.200  Sum_probs=71.2

Q ss_pred             CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEE-EeCCCcHHhhhCCCcEEEEcCC
Q 018512           41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRG-FLGQPQLENALTGMDLVIIPAG  119 (354)
Q Consensus        41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~-~~~~~d~~~al~~aDvVIi~ag  119 (354)
                      .+|||.|+||+|++|++++..|+..|.  +|+++|++....  .++.+... ..+.. +....++.++++++|+||++|+
T Consensus        12 ~~M~ilVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~--~~l~~~~~-~~~~~Dl~d~~~~~~~~~~~d~vih~a~   86 (342)
T 2x4g_A           12 AHVKYAVLGATGLLGHHAARAIRAAGH--DLVLIHRPSSQI--QRLAYLEP-ECRVAEMLDHAGLERALRGLDGVIFSAG   86 (342)
T ss_dssp             CCCEEEEESTTSHHHHHHHHHHHHTTC--EEEEEECTTSCG--GGGGGGCC-EEEECCTTCHHHHHHHTTTCSEEEEC--
T ss_pred             cCCEEEEECCCcHHHHHHHHHHHHCCC--EEEEEecChHhh--hhhccCCe-EEEEecCCCHHHHHHHHcCCCEEEECCc
Confidence            347999999999999999999999887  999999876211  11221110 01111 1111235678899999999998


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 018512          120 VPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  159 (354)
Q Consensus       120 ~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~t  159 (354)
                      ..........+.+..|+....++++.+.+.+...+|.+.|
T Consensus        87 ~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS  126 (342)
T 2x4g_A           87 YYPSRPRRWQEEVASALGQTNPFYAACLQARVPRILYVGS  126 (342)
T ss_dssp             ----------CHHHHHHHHHHHHHHHHHHHTCSCEEEECC
T ss_pred             cCcCCCCCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEECC
Confidence            6532223345567889999999999999886544444433

>4fgw_A Glycerol-3-phosphate dehydrogenase [NAD(+)] 1; oxidoreductase; 2.45A {Saccharomyces cerevisiae}

Probab=98.37  E-value=7.9e-07  Score=86.37  Aligned_cols=132  Identities=17%  Similarity=0.320  Sum_probs=68.1

Q ss_pred             hhHHHHHHHHHHhccCCCcccchhhhhhhhcccCCCCCCCeEEEEcCCCchHHHHHHHHHhCCC------CcEEEEEecC
Q 018512            4 SSEANQRIARISAHLYPPNLQENSCLRQAKCRAKGGAAGFKVAILGAAGGIGQPLAMLMKINPL------VSVLHLYDVV   77 (354)
Q Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kI~IiGa~G~vG~~~a~~l~~~~~------~~ei~L~D~~   77 (354)
                      |+.|..||+..++||++..-+..     ...+.....+|.||+|||| |.-|+++|..|..+++      ..+|.|+.++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~p~KI~ViGa-GsWGTALA~~la~ng~~~~~~~~~~V~lw~r~   74 (391)
T 4fgw_A            1 MSAAADRLNLTSGHLNAGRKRSS-----SSVSLKAAEKPFKVTVIGS-GNWGTTIAKVVAENCKGYPEVFAPIVQMWVFE   74 (391)
T ss_dssp             -------------------------------------CCEEEEEECC-SHHHHHHHHHHHHHHHHCTTTEEEEEEEECCC
T ss_pred             CcchhhHHHHHhhhhcccccccc-----ccccccccCCCCeEEEECc-CHHHHHHHHHHHHcCCCccccCCceEEEEEcc
Confidence            67899999999999976543211     0011112445679999999 9999999999987653      1368888876


Q ss_pred             Cc---hhHHHHHh--cCC--------CCCeEEEEeCCCcHHhhhCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHH
Q 018512           78 NT---PGVTADIS--HMD--------TGAVVRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCE  144 (354)
Q Consensus        78 ~~---~g~~~dl~--~~~--------~~~~v~~~~~~~d~~~al~~aDvVIi~ag~~~~~g~~r~d~~~~n~~~~~~i~~  144 (354)
                      +.   +..+..+.  |..        ....+..   ++|+.+++++||+||++.  |.              ..++++++
T Consensus        75 ~e~~~~~~~e~in~~~~N~~YLpgv~Lp~~i~~---t~dl~~al~~ad~ii~av--Ps--------------~~~r~~l~  135 (391)
T 4fgw_A           75 EEINGEKLTEIINTRHQNVKYLPGITLPDNLVA---NPDLIDSVKDVDIIVFNI--PH--------------QFLPRICS  135 (391)
T ss_dssp             CBSSSCBHHHHHTTTCCBTTTBTTCCCCSSEEE---ESCHHHHHTTCSEEEECS--CG--------------GGHHHHHH
T ss_pred             hHhhhHHHHHHHHhcCcCcccCCCCcCCCCcEE---eCCHHHHHhcCCEEEEEC--Ch--------------hhhHHHHH
Confidence            51   22233233  221        1233554   468999999999999973  31              35677788


Q ss_pred             HHhhhC-CCeEEEEecC
Q 018512          145 GIAKCC-PNATVNLISN  160 (354)
Q Consensus       145 ~i~~~~-p~a~viv~tN  160 (354)
                      +++.+- ++..+|.++-
T Consensus       136 ~l~~~~~~~~~iv~~~K  152 (391)
T 4fgw_A          136 QLKGHVDSHVRAISCLK  152 (391)
T ss_dssp             HHTTTSCTTCEEEECCC
T ss_pred             HhccccCCCceeEEecc
Confidence            888766 4666776653

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}

Probab=98.36  E-value=6.9e-07  Score=79.22  Aligned_cols=105  Identities=15%  Similarity=0.119  Sum_probs=72.3

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeC----CCcHHhhhCCCcEEEEc
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLG----QPQLENALTGMDLVIIP  117 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~----~~d~~~al~~aDvVIi~  117 (354)
                      +|||.|+||+|++|+.++..|+..|.  +|+++++++..     +....  ..+..+..    ..++.++++++|+||++
T Consensus         4 m~~ilItGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~-----~~~~~--~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~   74 (227)
T 3dhn_A            4 VKKIVLIGASGFVGSALLNEALNRGF--EVTAVVRHPEK-----IKIEN--EHLKVKKADVSSLDEVCEVCKGADAVISA   74 (227)
T ss_dssp             CCEEEEETCCHHHHHHHHHHHHTTTC--EEEEECSCGGG-----CCCCC--TTEEEECCCTTCHHHHHHHHTTCSEEEEC
T ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCC--EEEEEEcCccc-----chhcc--CceEEEEecCCCHHHHHHHhcCCCEEEEe
Confidence            57999999999999999999999987  99999997521     11111  22332211    12356788999999999


Q ss_pred             CCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 018512          118 AGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  159 (354)
Q Consensus       118 ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~t  159 (354)
                      +|....    ..+++..|+....++++.+++.+.+.+|.+.|
T Consensus        75 a~~~~~----~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss  112 (227)
T 3dhn_A           75 FNPGWN----NPDIYDETIKVYLTIIDGVKKAGVNRFLMVGG  112 (227)
T ss_dssp             CCC----------CCSHHHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred             CcCCCC----ChhHHHHHHHHHHHHHHHHHHhCCCEEEEeCC
Confidence            875421    12245678999999999999877555444444

>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=98.36  E-value=1.2e-06  Score=82.32  Aligned_cols=173  Identities=16%  Similarity=0.033  Sum_probs=95.7

Q ss_pred             CCCCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCch---hHHHHHhcCCCCCeEEEEeC-C---CcHHhhhCC
Q 018512           38 GGAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP---GVTADISHMDTGAVVRGFLG-Q---PQLENALTG  110 (354)
Q Consensus        38 ~~~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~---g~~~dl~~~~~~~~v~~~~~-~---~d~~~al~~  110 (354)
                      ++++.+||.|+||+|++|++++..|+..|.  +|+++|++...   ....++..   ...+..+.. -   .++.+++++
T Consensus        10 ~~~~~~~vlVTGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~Dl~d~~~~~~~~~~   84 (335)
T 1rpn_A           10 HGSMTRSALVTGITGQDGAYLAKLLLEKGY--RVHGLVARRSSDTRWRLRELGI---EGDIQYEDGDMADACSVQRAVIK   84 (335)
T ss_dssp             -----CEEEEETTTSHHHHHHHHHHHHTTC--EEEEEECCCSSCCCHHHHHTTC---GGGEEEEECCTTCHHHHHHHHHH
T ss_pred             ccccCCeEEEECCCChHHHHHHHHHHHCCC--eEEEEeCCCccccccchhhccc---cCceEEEECCCCCHHHHHHHHHH
Confidence            477889999999999999999999999887  99999987521   12222211   122332211 1   223456665


Q ss_pred             --CcEEEEcCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCC-CCCchHHHHHHHHHhCCCCCCCEE
Q 018512          111 --MDLVIIPAGVPRKP--GMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNP-VNSTVPIAAEVFKKAGTYDPKKLL  185 (354)
Q Consensus       111 --aDvVIi~ag~~~~~--g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNP-v~~~~~~~~~~~~~~~~~p~~kvi  185 (354)
                        .|+||++|+.....  .....+.+..|+....++++.+.+.+....+|++|.. +.....  ...+.......+...+
T Consensus        85 ~~~d~Vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS~~v~g~~~--~~~~~E~~~~~p~~~Y  162 (335)
T 1rpn_A           85 AQPQEVYNLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQASTSEMFGLIQ--AERQDENTPFYPRSPY  162 (335)
T ss_dssp             HCCSEEEECCSCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTSEEEEEEEGGGGCSCS--SSSBCTTSCCCCCSHH
T ss_pred             cCCCEEEECccccchhhhhhChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeCHHHhCCCC--CCCCCcccCCCCCChh
Confidence              59999999864321  1234567788999999999999988643344444321 100000  0000000111222334


Q ss_pred             EeccchHHHHHHHHHHHhCCCCCCCc-ceEEee
Q 018512          186 GVTMLDVVRANTFVAEVLGLDPRDVD-VPVVGG  217 (354)
Q Consensus       186 G~t~ld~~r~~~~la~~l~v~~~~v~-~~v~G~  217 (354)
                      |.+.....++-..+++.++++..-++ ..++|.
T Consensus       163 ~~sK~~~e~~~~~~~~~~~~~~~i~r~~~v~Gp  195 (335)
T 1rpn_A          163 GVAKLYGHWITVNYRESFGLHASSGILFNHESP  195 (335)
T ss_dssp             HHHHHHHHHHHHHHHHHHCCCEEEEEECCEECT
T ss_pred             HHHHHHHHHHHHHHHHHcCCcEEEEeeCcccCC
Confidence            44544455565666666776543333 345554

>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A

Probab=98.35  E-value=3e-06  Score=79.68  Aligned_cols=113  Identities=13%  Similarity=0.124  Sum_probs=71.7

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc--h--hHHHHHhcCCCCCeEEEE----eCCCcHHhhhCCCcE
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--P--GVTADISHMDTGAVVRGF----LGQPQLENALTGMDL  113 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~--~--g~~~dl~~~~~~~~v~~~----~~~~d~~~al~~aDv  113 (354)
                      ++||.|+||+|++|++++..|+..|+  +|+.++++..  .  ....++...   ..+..+    ....++.++++++|+
T Consensus         9 ~~~vlVTGatGfIG~~l~~~Ll~~G~--~V~~~~r~~~~~~~~~~~~~~~~~---~~~~~~~~Dl~d~~~~~~~~~~~D~   83 (338)
T 2rh8_A            9 KKTACVVGGTGFVASLLVKLLLQKGY--AVNTTVRDPDNQKKVSHLLELQEL---GDLKIFRADLTDELSFEAPIAGCDF   83 (338)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHTTC--EEEEEESCTTCTTTTHHHHHHGGG---SCEEEEECCTTTSSSSHHHHTTCSE
T ss_pred             CCEEEEECCchHHHHHHHHHHHHCCC--EEEEEEcCcchhhhHHHHHhcCCC---CcEEEEecCCCChHHHHHHHcCCCE
Confidence            46999999999999999999999988  8887776541  1  111223211   122222    122345678999999


Q ss_pred             EEEcCCCCCCCCCC-HHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 018512          114 VIIPAGVPRKPGMT-RDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  159 (354)
Q Consensus       114 VIi~ag~~~~~g~~-r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~t  159 (354)
                      ||++|+........ ..+++..|+....++++.+.+...-..||++|
T Consensus        84 Vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~r~V~~S  130 (338)
T 2rh8_A           84 VFHVATPVHFASEDPENDMIKPAIQGVVNVMKACTRAKSVKRVILTS  130 (338)
T ss_dssp             EEEESSCCCC---------CHHHHHHHHHHHHHHHHCTTCCEEEEEC
T ss_pred             EEEeCCccCCCCCCcHHHHHHHHHHHHHHHHHHHHHcCCcCEEEEEe
Confidence            99998754211111 12367889999999999998874223445444

>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*

Probab=98.34  E-value=1.4e-06  Score=82.05  Aligned_cols=174  Identities=16%  Similarity=0.164  Sum_probs=97.1

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhC-CCC---cEEEEEecCCchhHHHHHhcCCCCCeEEEEeC-C---CcHHhhhCCCcEE
Q 018512           43 FKVAILGAAGGIGQPLAMLMKIN-PLV---SVLHLYDVVNTPGVTADISHMDTGAVVRGFLG-Q---PQLENALTGMDLV  114 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~-~~~---~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~-~---~d~~~al~~aDvV  114 (354)
                      |||.|+||+|++|++++..|+.. +..   .+|+++|+....+....+........+..+.. -   .++.+++.++|+|
T Consensus         1 M~vlVTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~V   80 (337)
T 1r6d_A            1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVHGDIRDAGLLARELRGVDAI   80 (337)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGGGGTTCTTEEEEECCTTCHHHHHHHTTTCCEE
T ss_pred             CeEEEECCccHHHHHHHHHHHhhhcCCCCceEEEEEECCCccCchhhhhhcccCCCeEEEEcCCCCHHHHHHHhcCCCEE
Confidence            68999999999999999999985 222   38999998541100011111111122332211 1   2345677899999


Q ss_pred             EEcCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCCchHHHHHHHHHhCCCCCCCEEEeccchH
Q 018512          115 IIPAGVPRKP--GMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDV  192 (354)
Q Consensus       115 Ii~ag~~~~~--g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~~~~~~~~~~p~~kviG~t~ld~  192 (354)
                      |++|+.....  .....+++..|+....++++.+.+.....+|.+.|.-+.....  ...+......++...+|.+....
T Consensus        81 ih~A~~~~~~~~~~~~~~~~~~Nv~~~~~l~~a~~~~~~~~~v~~SS~~vyg~~~--~~~~~E~~~~~~~~~Y~~sK~~~  158 (337)
T 1r6d_A           81 VHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGVGRVVHVSTNQVYGSID--SGSWTESSPLEPNSPYAASKAGS  158 (337)
T ss_dssp             EECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGGGGCCCS--SSCBCTTSCCCCCSHHHHHHHHH
T ss_pred             EECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEecchHHhCCCC--CCCCCCCCCCCCCCchHHHHHHH
Confidence            9998864310  0123456788999999999999987654444444421100000  00000111122333444454555


Q ss_pred             HHHHHHHHHHhCCCCCCCc-ceEEeec
Q 018512          193 VRANTFVAEVLGLDPRDVD-VPVVGGH  218 (354)
Q Consensus       193 ~r~~~~la~~l~v~~~~v~-~~v~G~h  218 (354)
                      .++-..+++..|++..-++ +.++|..
T Consensus       159 e~~~~~~~~~~g~~~~ilrp~~v~G~~  185 (337)
T 1r6d_A          159 DLVARAYHRTYGLDVRITRCCNNYGPY  185 (337)
T ss_dssp             HHHHHHHHHHHCCCEEEEEECEEECTT
T ss_pred             HHHHHHHHHHHCCCEEEEEeeeeECCC
Confidence            5565666666777655554 4667754

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}

Probab=98.33  E-value=4.9e-06  Score=73.01  Aligned_cols=100  Identities=12%  Similarity=0.120  Sum_probs=69.0

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCe-EEE-EeCCCcHHhhhCCCcEEEEcCCC
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAV-VRG-FLGQPQLENALTGMDLVIIPAGV  120 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~-v~~-~~~~~d~~~al~~aDvVIi~ag~  120 (354)
                      |||+|+||+|++|+.++..|+..|.  +|+++++++...  .++. .  ... +.. +.. .+. +++.++|+||+++|.
T Consensus         1 MkvlVtGatG~iG~~l~~~L~~~g~--~V~~~~R~~~~~--~~~~-~--~~~~~~~D~~d-~~~-~~~~~~d~vi~~ag~   71 (221)
T 3ew7_A            1 MKIGIIGATGRAGSRILEEAKNRGH--EVTAIVRNAGKI--TQTH-K--DINILQKDIFD-LTL-SDLSDQNVVVDAYGI   71 (221)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESCSHHH--HHHC-S--SSEEEECCGGG-CCH-HHHTTCSEEEECCCS
T ss_pred             CeEEEEcCCchhHHHHHHHHHhCCC--EEEEEEcCchhh--hhcc-C--CCeEEeccccC-hhh-hhhcCCCEEEECCcC
Confidence            7999999999999999999999997  999999976221  1222 1  111 111 111 122 689999999999987


Q ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 018512          121 PRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  159 (354)
Q Consensus       121 ~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~t  159 (354)
                      +...       ...|+...+++++.+++.+... ++++|
T Consensus        72 ~~~~-------~~~~~~~~~~l~~a~~~~~~~~-~v~~S  102 (221)
T 3ew7_A           72 SPDE-------AEKHVTSLDHLISVLNGTVSPR-LLVVG  102 (221)
T ss_dssp             STTT-------TTSHHHHHHHHHHHHCSCCSSE-EEEEC
T ss_pred             Cccc-------cchHHHHHHHHHHHHHhcCCce-EEEEe
Confidence            5321       2447888999999998775444 44444

>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*

Probab=98.32  E-value=6.4e-07  Score=83.20  Aligned_cols=101  Identities=17%  Similarity=0.242  Sum_probs=66.0

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc--hhHHHHHh-----------cCCC------CCeEEEEeCCC
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADIS-----------HMDT------GAVVRGFLGQP  102 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~--~g~~~dl~-----------~~~~------~~~v~~~~~~~  102 (354)
                      .+||+|||+ |.+|+.+|..++..|+  +|+++|+++.  ......+.           ....      ...+..   ++
T Consensus         4 ~~kV~VIGa-G~mG~~iA~~la~~G~--~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~~i~~---~~   77 (283)
T 4e12_A            4 ITNVTVLGT-GVLGSQIAFQTAFHGF--AVTAYDINTDALDAAKKRFEGLAAVYEKEVAGAADGAAQKALGGIRY---SD   77 (283)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTC--EEEEECSSHHHHHHHHHHHHHHHHHHHHHSTTCTTTHHHHHHHHCEE---ES
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCC--eEEEEeCCHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHcCeEE---eC
Confidence            459999999 9999999999999998  9999999861  11111110           0000      011232   35


Q ss_pred             cHHhhhCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecCCCCC
Q 018512          103 QLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNS  164 (354)
Q Consensus       103 d~~~al~~aDvVIi~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~-p~a~viv~tNPv~~  164 (354)
                      ++.+++++||+||.+..              .+....+++.+.+.+++ |++++  +||...+
T Consensus        78 ~~~~~~~~aDlVi~av~--------------~~~~~~~~v~~~l~~~~~~~~il--~s~tS~~  124 (283)
T 4e12_A           78 DLAQAVKDADLVIEAVP--------------ESLDLKRDIYTKLGELAPAKTIF--ATNSSTL  124 (283)
T ss_dssp             CHHHHTTTCSEEEECCC--------------SCHHHHHHHHHHHHHHSCTTCEE--EECCSSS
T ss_pred             CHHHHhccCCEEEEecc--------------CcHHHHHHHHHHHHhhCCCCcEE--EECCCCC
Confidence            77788999999999852              12345666667777776 56654  4454443

>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2

Probab=98.31  E-value=1.8e-06  Score=81.25  Aligned_cols=113  Identities=19%  Similarity=0.130  Sum_probs=76.1

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC---chhHHHHHhcCCCCCeEEEEe-C---CCcHHhhhCC--Cc
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN---TPGVTADISHMDTGAVVRGFL-G---QPQLENALTG--MD  112 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~---~~g~~~dl~~~~~~~~v~~~~-~---~~d~~~al~~--aD  112 (354)
                      +|||.|+||+|++|++++..|+..|.  +|+++|+..   ......++....   .+..+. +   ..++.+++++  +|
T Consensus         1 M~~vlVTGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~l~~~~---~~~~~~~Dl~d~~~~~~~~~~~~~d   75 (347)
T 1orr_A            1 MAKLLITGGCGFLGSNLASFALSQGI--DLIVFDNLSRKGATDNLHWLSSLG---NFEFVHGDIRNKNDVTRLITKYMPD   75 (347)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTC--EEEEEECCCSTTHHHHHHHHHTTC---CCEEEECCTTCHHHHHHHHHHHCCS
T ss_pred             CcEEEEeCCCchhHHHHHHHHHhCCC--EEEEEeCCCccCchhhhhhhccCC---ceEEEEcCCCCHHHHHHHHhccCCC
Confidence            36899999999999999999999887  999999753   121223343221   122211 1   1234567777  99


Q ss_pred             EEEEcCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 018512          113 LVIIPAGVPRKP--GMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  159 (354)
Q Consensus       113 vVIi~ag~~~~~--g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~t  159 (354)
                      +||++|+.....  .....+.+..|+....++++.+.+...++.||++|
T Consensus        76 ~vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~iv~~S  124 (347)
T 1orr_A           76 SCFHLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNIIYSS  124 (347)
T ss_dssp             EEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEE
T ss_pred             EEEECCcccChhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEec
Confidence            999999864310  01334567889999999999999887664555554

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*

Probab=98.30  E-value=3.7e-06  Score=79.67  Aligned_cols=175  Identities=15%  Similarity=0.027  Sum_probs=100.8

Q ss_pred             CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc--hhHHHHHhcCCC---CCeEEEEeC----CCcHHhhhCCC
Q 018512           41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDT---GAVVRGFLG----QPQLENALTGM  111 (354)
Q Consensus        41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~--~g~~~dl~~~~~---~~~v~~~~~----~~d~~~al~~a  111 (354)
                      ++|||.|+||+|++|++++..|+..|.  +|+++|++..  .....++.....   ...+..+..    ..++.++++++
T Consensus        26 ~~~~vlVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~  103 (352)
T 1sb8_A           26 QPKVWLITGVAGFIGSNLLETLLKLDQ--KVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACAGV  103 (352)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHTTC
T ss_pred             cCCeEEEECCCcHHHHHHHHHHHHCCC--EEEEEeCCCccchhhHHHHhhhcccccCCceEEEECCCCCHHHHHHHhcCC
Confidence            356999999999999999999999887  8999998652  111122211000   012222211    12345778999


Q ss_pred             cEEEEcCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCCchHHHHHHHHHhCCCCCCCEEEecc
Q 018512          112 DLVIIPAGVPRKP--GMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTM  189 (354)
Q Consensus       112 DvVIi~ag~~~~~--g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~~~~~~~~~~p~~kviG~t~  189 (354)
                      |+||++|+.....  .....+.+..|+.....+++.+.+.....+|.+.|.-+.....  ...+.......+...+|.+.
T Consensus       104 d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~--~~~~~E~~~~~~~~~Y~~sK  181 (352)
T 1sb8_A          104 DYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAKVQSFTYAASSSTYGDHP--GLPKVEDTIGKPLSPYAVTK  181 (352)
T ss_dssp             SEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGTTCC--CSSBCTTCCCCCCSHHHHHH
T ss_pred             CEEEECCcccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHHhcCCCC--CCCCCCCCCCCCCChhHHHH
Confidence            9999999864211  0133456778999999999999887555554444421100000  00000000011223444455


Q ss_pred             chHHHHHHHHHHHhCCCCCCCc-ceEEeecC
Q 018512          190 LDVVRANTFVAEVLGLDPRDVD-VPVVGGHA  219 (354)
Q Consensus       190 ld~~r~~~~la~~l~v~~~~v~-~~v~G~hg  219 (354)
                      ....++-..+++..|++..-++ +.++|...
T Consensus       182 ~~~e~~~~~~~~~~g~~~~ilRp~~v~G~~~  212 (352)
T 1sb8_A          182 YVNELYADVFSRCYGFSTIGLRYFNVFGRRQ  212 (352)
T ss_dssp             HHHHHHHHHHHHHHCCCCEEEEECCEECTTC
T ss_pred             HHHHHHHHHHHHHcCCCEEEEEECceeCcCC
Confidence            5555666666677787766665 57888643

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A

Probab=98.30  E-value=6.7e-06  Score=77.01  Aligned_cols=115  Identities=14%  Similarity=0.005  Sum_probs=76.1

Q ss_pred             CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchh--HHHHHhcCCCCCeEEEE-----eCCCcHHhhhCCCcE
Q 018512           41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPG--VTADISHMDTGAVVRGF-----LGQPQLENALTGMDL  113 (354)
Q Consensus        41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g--~~~dl~~~~~~~~v~~~-----~~~~d~~~al~~aDv  113 (354)
                      +.++|.|+||+|++|++++..|+..|.  +|+++|++....  ....+.... ...+..+     ....++.++++++|+
T Consensus        10 ~~~~vlVTGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~d~~~~~~~~~~~d~   86 (342)
T 1y1p_A           10 EGSLVLVTGANGFVASHVVEQLLEHGY--KVRGTARSASKLANLQKRWDAKY-PGRFETAVVEDMLKQGAYDEVIKGAAG   86 (342)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESSHHHHHHHHHHHHHHS-TTTEEEEECSCTTSTTTTTTTTTTCSE
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCC--EEEEEeCCcccHHHHHHHhhccC-CCceEEEEecCCcChHHHHHHHcCCCE
Confidence            357999999999999999999999887  899999865211  111111100 0112221     112345567789999


Q ss_pred             EEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 018512          114 VIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  159 (354)
Q Consensus       114 VIi~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~t  159 (354)
                      ||++|+.... +....+.+..|+....++++.+.+......+|++|
T Consensus        87 vih~A~~~~~-~~~~~~~~~~n~~g~~~ll~~~~~~~~~~~iv~~S  131 (342)
T 1y1p_A           87 VAHIASVVSF-SNKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTS  131 (342)
T ss_dssp             EEECCCCCSC-CSCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEEC
T ss_pred             EEEeCCCCCC-CCCHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEec
Confidence            9999986532 23456678899999999999988533234455544

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*

Probab=98.30  E-value=2.5e-06  Score=82.04  Aligned_cols=174  Identities=14%  Similarity=0.048  Sum_probs=100.7

Q ss_pred             CCCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeE-EE-EeCCCcHHhhhCCCcEEEE
Q 018512           39 GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVV-RG-FLGQPQLENALTGMDLVII  116 (354)
Q Consensus        39 ~~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v-~~-~~~~~d~~~al~~aDvVIi  116 (354)
                      ..++|||.|+||+|++|++++..|+..|.  +|+++|++.....  .+...  ...+ .. +....++.++++++|+||+
T Consensus        26 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~--~~~~~--~v~~~~~Dl~d~~~~~~~~~~~d~Vih   99 (379)
T 2c5a_A           26 PSENLKISITGAGGFIASHIARRLKHEGH--YVIASDWKKNEHM--TEDMF--CDEFHLVDLRVMENCLKVTEGVDHVFN   99 (379)
T ss_dssp             TTSCCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESSCCSSS--CGGGT--CSEEEECCTTSHHHHHHHHTTCSEEEE
T ss_pred             cccCCeEEEECCccHHHHHHHHHHHHCCC--eEEEEECCCccch--hhccC--CceEEECCCCCHHHHHHHhCCCCEEEE
Confidence            34568999999999999999999999887  8999998752110  01111  1111 11 1111235677899999999


Q ss_pred             cCCCCCCC---CCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCCchHHH---HHHHHHhC--CCCCCCEEEec
Q 018512          117 PAGVPRKP---GMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIA---AEVFKKAG--TYDPKKLLGVT  188 (354)
Q Consensus       117 ~ag~~~~~---g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~---~~~~~~~~--~~p~~kviG~t  188 (354)
                      +|+.....   .....+.+..|+....++++.+.+.....+|.+.|.-+.....-.   ...+....  ..++...+|.+
T Consensus       100 ~A~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~~V~~SS~~v~~~~~~~~~~~~~~~E~~~~~~~~~~~Y~~s  179 (379)
T 2c5a_A          100 LAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASSACIYPEFKQLETTNVSLKESDAWPAEPQDAFGLE  179 (379)
T ss_dssp             CCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEGGGSCGGGSSSSSSCEECGGGGSSBCCSSHHHHH
T ss_pred             CceecCcccccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEeehheeCCCCCCCccCCCcCcccCCCCCCCChhHHH
Confidence            99865321   234556778899999999999988765555554442111100000   00000000  11222334444


Q ss_pred             cchHHHHHHHHHHHhCCCCCCCc-ceEEeec
Q 018512          189 MLDVVRANTFVAEVLGLDPRDVD-VPVVGGH  218 (354)
Q Consensus       189 ~ld~~r~~~~la~~l~v~~~~v~-~~v~G~h  218 (354)
                      .....++-..+++..|++..-++ +.++|..
T Consensus       180 K~~~E~~~~~~~~~~gi~~~ilrp~~v~G~~  210 (379)
T 2c5a_A          180 KLATEELCKHYNKDFGIECRIGRFHNIYGPF  210 (379)
T ss_dssp             HHHHHHHHHHHHHHHCCEEEEEEECCEECTT
T ss_pred             HHHHHHHHHHHHHHHCCCEEEEEeCceeCcC
Confidence            44445555556666677655554 5677754

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*

Probab=98.30  E-value=6.5e-06  Score=77.39  Aligned_cols=117  Identities=13%  Similarity=0.050  Sum_probs=75.0

Q ss_pred             CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc-hhHHHHHhcCCC-CCeEEEE----eCCCcHHhhhCCCcEE
Q 018512           41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT-PGVTADISHMDT-GAVVRGF----LGQPQLENALTGMDLV  114 (354)
Q Consensus        41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~-~g~~~dl~~~~~-~~~v~~~----~~~~d~~~al~~aDvV  114 (354)
                      +.++|.|+||+|++|++++..|+..|+  +|+.++++.. .....++..... ...+..+    ....++.++++++|+|
T Consensus         4 ~~~~vlVTGatGfIG~~l~~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~V   81 (337)
T 2c29_D            4 QSETVCVTGASGFIGSWLVMRLLERGY--TVRATVRDPTNVKKVKHLLDLPKAETHLTLWKADLADEGSFDEAIKGCTGV   81 (337)
T ss_dssp             --CEEEETTTTSHHHHHHHHHHHHTTC--EEEEEESCTTCHHHHHHHHTSTTHHHHEEEEECCTTSTTTTHHHHTTCSEE
T ss_pred             CCCEEEEECCchHHHHHHHHHHHHCCC--EEEEEECCcchhHHHHHHHhcccCCCeEEEEEcCCCCHHHHHHHHcCCCEE
Confidence            356899999999999999999999987  8888777652 111222222110 0122222    1223456789999999


Q ss_pred             EEcCCCCCCCCCCH-HHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 018512          115 IIPAGVPRKPGMTR-DDLFNINAGIVRTLCEGIAKCCPNATVNLIS  159 (354)
Q Consensus       115 Ii~ag~~~~~g~~r-~d~~~~n~~~~~~i~~~i~~~~p~a~viv~t  159 (354)
                      |++|+......... .+.+..|+....++++.+.+...-..||++|
T Consensus        82 ih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~riV~~S  127 (337)
T 2c29_D           82 FHVATPMDFESKDPENEVIKPTIEGMLGIMKSCAAAKTVRRLVFTS  127 (337)
T ss_dssp             EECCCCCCSSCSSHHHHTHHHHHHHHHHHHHHHHHHSCCCEEEEEC
T ss_pred             EEeccccCCCCCChHHHHHHHHHHHHHHHHHHHHhCCCccEEEEee
Confidence            99987542112222 3467889999999999998876323444444

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}

Probab=98.28  E-value=4.2e-06  Score=73.80  Aligned_cols=102  Identities=18%  Similarity=0.112  Sum_probs=70.1

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeE-EE-EeCCCcHHhhhCCCcEEEEcCCC
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVV-RG-FLGQPQLENALTGMDLVIIPAGV  120 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v-~~-~~~~~d~~~al~~aDvVIi~ag~  120 (354)
                      |||.|+||+|++|+.++..|+..|.  +|++++++...  ..++....  ..+ .. +.. .+. +++.++|+||+++|.
T Consensus         1 MkilVtGatG~iG~~l~~~L~~~g~--~V~~~~R~~~~--~~~~~~~~--~~~~~~D~~d-~~~-~~~~~~d~vi~~ag~   72 (224)
T 3h2s_A            1 MKIAVLGATGRAGSAIVAEARRRGH--EVLAVVRDPQK--AADRLGAT--VATLVKEPLV-LTE-ADLDSVDAVVDALSV   72 (224)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESCHHH--HHHHTCTT--SEEEECCGGG-CCH-HHHTTCSEEEECCCC
T ss_pred             CEEEEEcCCCHHHHHHHHHHHHCCC--EEEEEEecccc--cccccCCC--ceEEeccccc-ccH-hhcccCCEEEECCcc
Confidence            7999999999999999999999987  99999987522  12222211  111 11 111 122 679999999999987


Q ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 018512          121 PRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  159 (354)
Q Consensus       121 ~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~t  159 (354)
                      ...+..     ...|+...+++++.+++.+  ..++++|
T Consensus        73 ~~~~~~-----~~~n~~~~~~l~~a~~~~~--~~~v~~S  104 (224)
T 3h2s_A           73 PWGSGR-----GYLHLDFATHLVSLLRNSD--TLAVFIL  104 (224)
T ss_dssp             CTTSSC-----THHHHHHHHHHHHTCTTCC--CEEEEEC
T ss_pred             CCCcch-----hhHHHHHHHHHHHHHHHcC--CcEEEEe
Confidence            522221     3568899999999998876  4445443

>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}

Probab=98.28  E-value=2.7e-06  Score=79.85  Aligned_cols=175  Identities=14%  Similarity=0.054  Sum_probs=99.3

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeC-CC---cHHhhhCCCcEEEEc
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLG-QP---QLENALTGMDLVIIP  117 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~-~~---d~~~al~~aDvVIi~  117 (354)
                      .|||.|+||+|++|++++..|+..|...+|+.+|+....+....+.+......+..+.. -.   ++.+++.++|+||++
T Consensus         3 ~m~vlVTGatG~iG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih~   82 (336)
T 2hun_A            3 SMKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDKLGYGSNPANLKDLEDDPRYTFVKGDVADYELVKELVRKVDGVVHL   82 (336)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHTCSEEEEC
T ss_pred             CCeEEEECCCchHHHHHHHHHHHhCCCCEEEEEecCcccCchhHHhhhccCCceEEEEcCCCCHHHHHHHhhCCCEEEEC
Confidence            47999999999999999999988763238999998641110011222111122333211 12   245667899999999


Q ss_pred             CCCCCCC--CCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCC-CCCchHHHHHHHHHhCCCCCCCEEEeccchHHH
Q 018512          118 AGVPRKP--GMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNP-VNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVR  194 (354)
Q Consensus       118 ag~~~~~--g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNP-v~~~~~~~~~~~~~~~~~p~~kviG~t~ld~~r  194 (354)
                      |+.....  .....+++..|+....++++.+.+......||++|.. +.....  ...+......++...+|.+.....+
T Consensus        83 A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~vyg~~~--~~~~~E~~~~~~~~~Y~~sK~~~e~  160 (336)
T 2hun_A           83 AAESHVDRSISSPEIFLHSNVIGTYTLLESIRRENPEVRFVHVSTDEVYGDIL--KGSFTENDRLMPSSPYSATKAASDM  160 (336)
T ss_dssp             CCCCCHHHHHHCTHHHHHHHHHHHHHHHHHHHHHCTTSEEEEEEEGGGGCCCS--SSCBCTTBCCCCCSHHHHHHHHHHH
T ss_pred             CCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEeccHHHHCCCC--CCCcCCCCCCCCCCccHHHHHHHHH
Confidence            9864310  0123456788999999999999988643455555421 100000  0000011122333345555555556


Q ss_pred             HHHHHHHHhCCCCCCCc-ceEEeec
Q 018512          195 ANTFVAEVLGLDPRDVD-VPVVGGH  218 (354)
Q Consensus       195 ~~~~la~~l~v~~~~v~-~~v~G~h  218 (354)
                      +-..+++.+|++..-++ +.++|..
T Consensus       161 ~~~~~~~~~~~~~~ilrp~~v~g~~  185 (336)
T 2hun_A          161 LVLGWTRTYNLNASITRCTNNYGPY  185 (336)
T ss_dssp             HHHHHHHHTTCEEEEEEECEEESTT
T ss_pred             HHHHHHHHhCCCEEEEeeeeeeCcC
Confidence            66666777776555454 4566754

>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*

Probab=98.28  E-value=1.5e-06  Score=82.45  Aligned_cols=174  Identities=17%  Similarity=0.102  Sum_probs=97.8

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhC-CCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeC-CC---cHHhhhC--CCcEEE
Q 018512           43 FKVAILGAAGGIGQPLAMLMKIN-PLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLG-QP---QLENALT--GMDLVI  115 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~-~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~-~~---d~~~al~--~aDvVI  115 (354)
                      |||.|+||+|++|++++..|+.. +.  +|+++|++...+....+.+......+..+.. -.   ++.++++  ++|+||
T Consensus         1 MkvlVTGasG~iG~~l~~~L~~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vi   78 (361)
T 1kew_A            1 MKILITGGAGFIGSAVVRHIIKNTQD--TVVNIDKLTYAGNLESLSDISESNRYNFEHADICDSAEITRIFEQYQPDAVM   78 (361)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHHCSC--EEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHHCCSEEE
T ss_pred             CEEEEECCCchHhHHHHHHHHhcCCC--eEEEEecCCCCCchhhhhhhhcCCCeEEEECCCCCHHHHHHHHhhcCCCEEE
Confidence            68999999999999999999886 56  8999998641100011221111122333211 12   2445666  899999


Q ss_pred             EcCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHhhh--CCC------eEEEEecCC-CCCchHHHHH--------HHHHh
Q 018512          116 IPAGVPRKP--GMTRDDLFNINAGIVRTLCEGIAKC--CPN------ATVNLISNP-VNSTVPIAAE--------VFKKA  176 (354)
Q Consensus       116 i~ag~~~~~--g~~r~d~~~~n~~~~~~i~~~i~~~--~p~------a~viv~tNP-v~~~~~~~~~--------~~~~~  176 (354)
                      ++|+.....  .....+++..|+.....+++.+.+.  ..+      +.||++|.. +.-...--..        .+...
T Consensus        79 h~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~v~~~~~~~~~iv~~SS~~v~g~~~~~~~~~~~~~~~~~~E~  158 (361)
T 1kew_A           79 HLAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTET  158 (361)
T ss_dssp             ECCSCCCHHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTTSCCCCBCTT
T ss_pred             ECCCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhccCcccccccCceEEEeCCHHHhCCCcccccccccccCCCCCCC
Confidence            999865310  0123456788999999999999887  533      355555421 1000000000        00011


Q ss_pred             CCCCCCCEEEeccchHHHHHHHHHHHhCCCCCCCc-ceEEeec
Q 018512          177 GTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVD-VPVVGGH  218 (354)
Q Consensus       177 ~~~p~~kviG~t~ld~~r~~~~la~~l~v~~~~v~-~~v~G~h  218 (354)
                      ...++...+|.+.....++-..+++.+|++..-++ +.++|..
T Consensus       159 ~~~~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~~vrp~~v~G~~  201 (361)
T 1kew_A          159 TAYAPSSPYSASKASSDHLVRAWRRTYGLPTIVTNCSNNYGPY  201 (361)
T ss_dssp             SCCCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTT
T ss_pred             CCCCCCCccHHHHHHHHHHHHHHHHHhCCcEEEEeeceeECCC
Confidence            11233344555555555666667777787665554 4667754

>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*

Probab=98.28  E-value=3.6e-06  Score=78.96  Aligned_cols=161  Identities=14%  Similarity=-0.012  Sum_probs=91.1

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeC----CCcHHhhhCC--CcEEE
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLG----QPQLENALTG--MDLVI  115 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~----~~d~~~al~~--aDvVI  115 (354)
                      .|+|.|+||+|++|++++..|+..|.  +|+++|++........+........+..+..    ..++.+++++  .|+||
T Consensus         3 ~~~vlVtGatG~iG~~l~~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vi   80 (345)
T 2z1m_A            3 GKRALITGIRGQDGAYLAKLLLEKGY--EVYGADRRSGEFASWRLKELGIENDVKIIHMDLLEFSNIIRTIEKVQPDEVY   80 (345)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTC--EEEEECSCCSTTTTHHHHHTTCTTTEEECCCCTTCHHHHHHHHHHHCCSEEE
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCC--EEEEEECCCcccccccHhhccccCceeEEECCCCCHHHHHHHHHhcCCCEEE
Confidence            46899999999999999999999887  9999998762111011221111112332211    1223456665  59999


Q ss_pred             EcCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEe-cCCCCCchHHHHHHHHHhCCCCCCCEEEeccchH
Q 018512          116 IPAGVPRKP--GMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLI-SNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDV  192 (354)
Q Consensus       116 i~ag~~~~~--g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~-tNPv~~~~~~~~~~~~~~~~~p~~kviG~t~ld~  192 (354)
                      ++|+.....  .....+.+..|+.....+++.+.+.+....+|++ |.-+.-...  ...+......++...+|.+....
T Consensus        81 h~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~vyg~~~--~~~~~e~~~~~~~~~Y~~sK~~~  158 (345)
T 2z1m_A           81 NLAAQSFVGVSFEQPILTAEVDAIGVLRILEALRTVKPDTKFYQASTSEMFGKVQ--EIPQTEKTPFYPRSPYAVAKLFG  158 (345)
T ss_dssp             ECCCCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTCEEEEEEEGGGGCSCS--SSSBCTTSCCCCCSHHHHHHHHH
T ss_pred             ECCCCcchhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEEechhhcCCCC--CCCCCccCCCCCCChhHHHHHHH
Confidence            999865311  1234566788999999999999887643444544 321100000  00000111223333445554455


Q ss_pred             HHHHHHHHHHhCCC
Q 018512          193 VRANTFVAEVLGLD  206 (354)
Q Consensus       193 ~r~~~~la~~l~v~  206 (354)
                      .++-..+++.++++
T Consensus       159 e~~~~~~~~~~~~~  172 (345)
T 2z1m_A          159 HWITVNYREAYNMF  172 (345)
T ss_dssp             HHHHHHHHHHHCCC
T ss_pred             HHHHHHHHHHhCCc
Confidence            55656666666754

>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0

Probab=98.27  E-value=2e-06  Score=80.08  Aligned_cols=166  Identities=14%  Similarity=0.129  Sum_probs=96.3

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEE----eCCCcHHhhhCCCcEEEEc
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGF----LGQPQLENALTGMDLVIIP  117 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~----~~~~d~~~al~~aDvVIi~  117 (354)
                      ++||.|+||+|++|++++..|+..|.  .+++.+......   +...    ..+..+    .. .++.++++++|+||++
T Consensus         1 M~~vlVTGatG~iG~~l~~~L~~~g~--~v~~~~~~~~~~---~~~~----~~~~~~~~Dl~~-~~~~~~~~~~d~vih~   70 (313)
T 3ehe_A            1 MSLIVVTGGAGFIGSHVVDKLSESNE--IVVIDNLSSGNE---EFVN----EAARLVKADLAA-DDIKDYLKGAEEVWHI   70 (313)
T ss_dssp             --CEEEETTTSHHHHHHHHHHTTTSC--EEEECCCSSCCG---GGSC----TTEEEECCCTTT-SCCHHHHTTCSEEEEC
T ss_pred             CCEEEEECCCchHHHHHHHHHHhCCC--EEEEEcCCCCCh---hhcC----CCcEEEECcCCh-HHHHHHhcCCCEEEEC
Confidence            35899999999999999999998883  444443332110   0011    111111    12 3457888999999999


Q ss_pred             CCCCCC--CCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCCchHHHHHHHHHhCCCCCCCEEEeccchHHHH
Q 018512          118 AGVPRK--PGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRA  195 (354)
Q Consensus       118 ag~~~~--~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~~~~~~~~~~p~~kviG~t~ld~~r~  195 (354)
                      |+.+..  ......+.+..|+....++++.+++.+...+|.+.|.-+.-...  ...+......++...+|.+.....++
T Consensus        71 a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~iv~~SS~~vyg~~~--~~~~~E~~~~~~~~~Y~~sK~~~e~~  148 (313)
T 3ehe_A           71 AANPDVRIGAENPDEIYRNNVLATYRLLEAMRKAGVSRIVFTSTSTVYGEAK--VIPTPEDYPTHPISLYGASKLACEAL  148 (313)
T ss_dssp             CCCCCCC-CCCCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEECCGGGGCSCS--SSSBCTTSCCCCCSHHHHHHHHHHHH
T ss_pred             CCCCChhhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCchHHhCcCC--CCCCCCCCCCCCCCHHHHHHHHHHHH
Confidence            986532  12345667788999999999999988755544444311100000  00000011122334455555555666


Q ss_pred             HHHHHHHhCCCCCCCc-ceEEeecC
Q 018512          196 NTFVAEVLGLDPRDVD-VPVVGGHA  219 (354)
Q Consensus       196 ~~~la~~l~v~~~~v~-~~v~G~hg  219 (354)
                      ...+++.+|++..-++ +.++|...
T Consensus       149 ~~~~~~~~g~~~~ilRp~~v~G~~~  173 (313)
T 3ehe_A          149 IESYCHTFDMQAWIYRFANVIGRRS  173 (313)
T ss_dssp             HHHHHHHTTCEEEEEECSCEESTTC
T ss_pred             HHHHHHhcCCCEEEEeeccccCcCC
Confidence            6777777787655554 56777643

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*

Probab=98.27  E-value=3.6e-06  Score=77.01  Aligned_cols=151  Identities=17%  Similarity=0.137  Sum_probs=94.2

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEe----CCCcHHhhhCCCcEEEEcC
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFL----GQPQLENALTGMDLVIIPA  118 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~----~~~d~~~al~~aDvVIi~a  118 (354)
                      ++|.|+||+|++|+.++..|+..|.  +|++.|+++....         ...+..+.    ...++.++++++|+||++|
T Consensus         4 k~vlVTGasg~IG~~la~~L~~~G~--~V~~~~r~~~~~~---------~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~A   72 (267)
T 3rft_A            4 KRLLVTGAAGQLGRVMRERLAPMAE--ILRLADLSPLDPA---------GPNEECVQCDLADANAVNAMVAGCDGIVHLG   72 (267)
T ss_dssp             EEEEEESTTSHHHHHHHHHTGGGEE--EEEEEESSCCCCC---------CTTEEEEECCTTCHHHHHHHHTTCSEEEECC
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCC--EEEEEecCCcccc---------CCCCEEEEcCCCCHHHHHHHHcCCCEEEECC
Confidence            5799999999999999999998887  8999999762111         11122211    1123567789999999999


Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCCchHHHHHHHHHhCCCCCCCEEEeccchHHHHHHH
Q 018512          119 GVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTF  198 (354)
Q Consensus       119 g~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~~~~~~~~~~p~~kviG~t~ld~~r~~~~  198 (354)
                      |...  .....+.+..|+.....+++.+++.....+|.+.|.-+.....- ...+......++...+|.+......+.+.
T Consensus        73 g~~~--~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iv~~SS~~~~g~~~~-~~~~~e~~~~~~~~~Y~~sK~~~e~~~~~  149 (267)
T 3rft_A           73 GISV--EKPFEQILQGNIIGLYNLYEAARAHGQPRIVFASSNHTIGYYPQ-TERLGPDVPARPDGLYGVSKCFGENLARM  149 (267)
T ss_dssp             SCCS--CCCHHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGGGGTTSBT-TSCBCTTSCCCCCSHHHHHHHHHHHHHHH
T ss_pred             CCcC--cCCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcchHHhCCCCC-CCCCCCCCCCCCCChHHHHHHHHHHHHHH
Confidence            8742  23456677889999999999998876555555444322100000 00000111223334455555555666677


Q ss_pred             HHHHhCCCC
Q 018512          199 VAEVLGLDP  207 (354)
Q Consensus       199 la~~l~v~~  207 (354)
                      +++.+|++.
T Consensus       150 ~a~~~g~~~  158 (267)
T 3rft_A          150 YFDKFGQET  158 (267)
T ss_dssp             HHHHHCCCE
T ss_pred             HHHHhCCeE
Confidence            777777653

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}

Probab=98.25  E-value=2.1e-06  Score=81.76  Aligned_cols=117  Identities=15%  Similarity=0.099  Sum_probs=76.5

Q ss_pred             CCCCeEEEEcCCCchHHHHHHHHHh--CCCCcEEEEEecCCchh--HHHHHhcCC-----CCCeEEEEeC----CCcHHh
Q 018512           40 AAGFKVAILGAAGGIGQPLAMLMKI--NPLVSVLHLYDVVNTPG--VTADISHMD-----TGAVVRGFLG----QPQLEN  106 (354)
Q Consensus        40 ~~~~kI~IiGa~G~vG~~~a~~l~~--~~~~~ei~L~D~~~~~g--~~~dl~~~~-----~~~~v~~~~~----~~d~~~  106 (354)
                      .++|+|.|+||+|++|++++..|+.  .|.  +|+++|+.....  .........     ....+..+..    ..++.+
T Consensus         8 ~~~~~vlVTGatG~IG~~l~~~L~~~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~   85 (362)
T 3sxp_A            8 LENQTILITGGAGFVGSNLAFHFQENHPKA--KVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEVIAADINNPLDLRR   85 (362)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHHCTTS--EEEEEECCCCC-------CCCCCCGGGGTTCCSEEEECCTTCHHHHHH
T ss_pred             cCCCEEEEECCCCHHHHHHHHHHHhhCCCC--eEEEEECCCccccccccchhhhhhhhhccccCceEEECCCCCHHHHHH
Confidence            3467999999999999999999998  777  999999854200  000000000     0111222211    123445


Q ss_pred             h-hCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 018512          107 A-LTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  159 (354)
Q Consensus       107 a-l~~aDvVIi~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~t  159 (354)
                      + ..++|+||++|+..........+.+..|+....++++.+++.+.. +|.+.|
T Consensus        86 ~~~~~~D~vih~A~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~-~V~~SS  138 (362)
T 3sxp_A           86 LEKLHFDYLFHQAAVSDTTMLNQELVMKTNYQAFLNLLEIARSKKAK-VIYASS  138 (362)
T ss_dssp             HTTSCCSEEEECCCCCGGGCCCHHHHHHHHTHHHHHHHHHHHHTTCE-EEEEEE
T ss_pred             hhccCCCEEEECCccCCccccCHHHHHHHHHHHHHHHHHHHHHcCCc-EEEeCc
Confidence            5 689999999998654333456677889999999999999887654 444444

>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*

Probab=98.24  E-value=7.5e-07  Score=84.11  Aligned_cols=174  Identities=17%  Similarity=0.122  Sum_probs=97.4

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeC-C---CcHHhhhCCCcEEEEc
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLG-Q---PQLENALTGMDLVIIP  117 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~-~---~d~~~al~~aDvVIi~  117 (354)
                      +|+|.|+||+|++|++++..|+..+...+|+++|++...+....+.... ...+..+.. -   .++.++++++|+||++
T Consensus         4 m~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~Dl~d~~~~~~~~~~~d~vih~   82 (348)
T 1oc2_A            4 FKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAIL-GDRVELVVGDIADAELVDKLAAKADAIVHY   82 (348)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGGC-SSSEEEEECCTTCHHHHHHHHTTCSEEEEC
T ss_pred             CcEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEeCCCCCCChhHHhhhc-cCCeEEEECCCCCHHHHHHHhhcCCEEEEC
Confidence            4699999999999999999998873223999999864110001111111 122332211 1   2345778999999999


Q ss_pred             CCCCCCC--CCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecC-CCCCchH-------H---HHHHHHHhCCCCCCCE
Q 018512          118 AGVPRKP--GMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISN-PVNSTVP-------I---AAEVFKKAGTYDPKKL  184 (354)
Q Consensus       118 ag~~~~~--g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tN-Pv~~~~~-------~---~~~~~~~~~~~p~~kv  184 (354)
                      |+.....  .....+.+..|+....++++.+.+.+.  .+|++|. -+.....       .   ....+......++...
T Consensus        83 A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~--~~v~~SS~~vyg~~~~~~~~~~~~~~~~~~~~E~~~~~~~~~  160 (348)
T 1oc2_A           83 AAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYDI--RFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAETNYNPSSP  160 (348)
T ss_dssp             CSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHHTC--EEEEEEEGGGGCCBCCGGGSTTTTCSTTSSBCTTSCCCCCSH
T ss_pred             CcccCccchhhCHHHHHHHHHHHHHHHHHHHHHhCC--eEEEecccceeCCCcccccccccccccCCCcCCCCCCCCCCc
Confidence            9865310  012345678899999999999998754  4454432 1100000       0   0000001112233334


Q ss_pred             EEeccchHHHHHHHHHHHhCCCCCCCc-ceEEeec
Q 018512          185 LGVTMLDVVRANTFVAEVLGLDPRDVD-VPVVGGH  218 (354)
Q Consensus       185 iG~t~ld~~r~~~~la~~l~v~~~~v~-~~v~G~h  218 (354)
                      +|.+.....++-..+++.+|++..-++ +.++|..
T Consensus       161 Y~~sK~~~e~~~~~~~~~~gi~~~ilrp~~v~G~~  195 (348)
T 1oc2_A          161 YSSTKAASDLIVKAWVRSFGVKATISNCSNNYGPY  195 (348)
T ss_dssp             HHHHHHHHHHHHHHHHHHHCCEEEEEEECCEESTT
T ss_pred             cHHHHHHHHHHHHHHHHHhCCCEEEEeeceeeCCC
Confidence            555555555666666666777655554 4567754

>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}

Probab=98.23  E-value=6.9e-06  Score=80.96  Aligned_cols=120  Identities=18%  Similarity=0.162  Sum_probs=80.3

Q ss_pred             CCCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcC----------------CCCCeEEEEeCCC
Q 018512           39 GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHM----------------DTGAVVRGFLGQP  102 (354)
Q Consensus        39 ~~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~----------------~~~~~v~~~~~~~  102 (354)
                      ++++.+|+|||. |+||..+|..|+..|+  +|+.+|+++.+  +..|+..                .....++.   ++
T Consensus        18 ~~~m~~IaViGl-GYVGLp~A~~~A~~G~--~V~g~Did~~k--V~~ln~G~~pi~Epgl~ell~~~~~~g~l~~---tt   89 (444)
T 3vtf_A           18 GSHMASLSVLGL-GYVGVVHAVGFALLGH--RVVGYDVNPSI--VERLRAGRPHIYEPGLEEALGRALSSGRLSF---AE   89 (444)
T ss_dssp             TCCCCEEEEECC-SHHHHHHHHHHHHHTC--EEEEECSCHHH--HHHHHTTCCSSCCTTHHHHHHHHHHTTCEEE---CS
T ss_pred             CCCCCEEEEEcc-CHHHHHHHHHHHhCCC--cEEEEECCHHH--HHHHHCCCCCCCCCCHHHHHHHHHHcCCeeE---Ec
Confidence            345679999999 9999999999999898  99999998621  1112211                01233543   46


Q ss_pred             cHHhhhCCCcEEEEcCCCCCCCCC-CHHHHHHHHHHHHHHHHHHHhhhCCCeEEEE-ecCCCCCchHHH
Q 018512          103 QLENALTGMDLVIIPAGVPRKPGM-TRDDLFNINAGIVRTLCEGIAKCCPNATVNL-ISNPVNSTVPIA  169 (354)
Q Consensus       103 d~~~al~~aDvVIi~ag~~~~~g~-~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv-~tNPv~~~~~~~  169 (354)
                      +.++++++||++|++.+.|..... ....+   -....+.+++.++..++..+|++ .|-|++..-.+.
T Consensus        90 ~~~~ai~~ad~~~I~VpTP~~~d~~~Dl~~---v~~a~~~I~~~l~~~~~g~lVV~eSTVppGtte~~~  155 (444)
T 3vtf_A           90 SAEEAVAATDATFIAVGTPPAPDGSADLRY---VEAAARAVGRGIRAKGRWHLVVVKSTVPPGTTEGLV  155 (444)
T ss_dssp             SHHHHHHTSSEEEECCCCCBCTTSSBCCHH---HHHHHHHHHHHHHHHCSCCEEEECSCCCTTTTTTHH
T ss_pred             CHHHHHhcCCceEEEecCCCCCCCCCCcHH---HHHHHHHHHHHHhhcCCCeEEEEeCCCCCchHHHHH
Confidence            778899999999999998865432 22222   23455677777776665554444 468887765443

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}

Probab=98.23  E-value=9.6e-07  Score=78.09  Aligned_cols=101  Identities=18%  Similarity=0.223  Sum_probs=69.7

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEe----C-CCcHHhhhCCCcEEEEc
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFL----G-QPQLENALTGMDLVIIP  117 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~----~-~~d~~~al~~aDvVIi~  117 (354)
                      |||.|+||+|++|+.++..|+..|.  +|++++++...     +...   ..+..+.    . ..++.++++++|+||++
T Consensus         1 M~ilItGatG~iG~~l~~~L~~~g~--~V~~~~R~~~~-----~~~~---~~~~~~~~D~~d~~~~~~~~~~~~d~vi~~   70 (219)
T 3dqp_A            1 MKIFIVGSTGRVGKSLLKSLSTTDY--QIYAGARKVEQ-----VPQY---NNVKAVHFDVDWTPEEMAKQLHGMDAIINV   70 (219)
T ss_dssp             CEEEEESTTSHHHHHHHHHHTTSSC--EEEEEESSGGG-----SCCC---TTEEEEECCTTSCHHHHHTTTTTCSEEEEC
T ss_pred             CeEEEECCCCHHHHHHHHHHHHCCC--EEEEEECCccc-----hhhc---CCceEEEecccCCHHHHHHHHcCCCEEEEC
Confidence            6999999999999999999999887  99999997521     1111   1122211    1 12456788999999999


Q ss_pred             CCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 018512          118 AGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  159 (354)
Q Consensus       118 ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~t  159 (354)
                      +|.....      .+..|+.....+++.+++.+...+|.+.|
T Consensus        71 ag~~~~~------~~~~n~~~~~~l~~a~~~~~~~~iv~~SS  106 (219)
T 3dqp_A           71 SGSGGKS------LLKVDLYGAVKLMQAAEKAEVKRFILLST  106 (219)
T ss_dssp             CCCTTSS------CCCCCCHHHHHHHHHHHHTTCCEEEEECC
T ss_pred             CcCCCCC------cEeEeHHHHHHHHHHHHHhCCCEEEEECc
Confidence            9876421      23456777888888888776554444334

>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}

Probab=98.21  E-value=5e-06  Score=82.41  Aligned_cols=121  Identities=16%  Similarity=0.219  Sum_probs=77.5

Q ss_pred             CCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhH--H----HHHhcCCC---------CCeEEEEeCCCcH
Q 018512           40 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGV--T----ADISHMDT---------GAVVRGFLGQPQL  104 (354)
Q Consensus        40 ~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~--~----~dl~~~~~---------~~~v~~~~~~~d~  104 (354)
                      .+.+||+|||+ |.+|..+|..|+..|+  +|+++|+++.++.  .    ..+.....         ...++.   ++++
T Consensus        52 ~~i~kVaVIGa-G~MG~~IA~~la~aG~--~V~l~D~~~e~a~~~i~~~l~~~~~~G~l~~~~~~~~~~~i~~---t~dl  125 (460)
T 3k6j_A           52 YDVNSVAIIGG-GTMGKAMAICFGLAGI--ETFLVVRNEQRCKQELEVMYAREKSFKRLNDKRIEKINANLKI---TSDF  125 (460)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHHTTC--EEEEECSCHHHHHHHHHHHHHHHHHTTSCCHHHHHHHHTTEEE---ESCG
T ss_pred             ccCCEEEEECC-CHHHHHHHHHHHHCCC--eEEEEECcHHHHHHHHHHHHHHHHHcCCCCHHHHHHHhcceEE---eCCH
Confidence            44579999999 9999999999999998  9999999863221  0    11111110         122443   3466


Q ss_pred             HhhhCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecCCCCCchHHHHHHHHHhCCCCCCC
Q 018512          105 ENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNSTVPIAAEVFKKAGTYDPKK  183 (354)
Q Consensus       105 ~~al~~aDvVIi~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~-p~a~viv~tNPv~~~~~~~~~~~~~~~~~p~~k  183 (354)
                       +++++||+||.+..              .+..+.+++.+.+.+++ |+++|  +||...+-...    +.....- +.+
T Consensus       126 -~al~~aDlVIeAVp--------------e~~~vk~~v~~~l~~~~~~~aIl--asnTSsl~i~~----ia~~~~~-p~r  183 (460)
T 3k6j_A          126 -HKLSNCDLIVESVI--------------EDMKLKKELFANLENICKSTCIF--GTNTSSLDLNE----ISSVLRD-PSN  183 (460)
T ss_dssp             -GGCTTCSEEEECCC--------------SCHHHHHHHHHHHHTTSCTTCEE--EECCSSSCHHH----HHTTSSS-GGG
T ss_pred             -HHHccCCEEEEcCC--------------CCHHHHHHHHHHHHhhCCCCCEE--EecCCChhHHH----HHHhccC-Ccc
Confidence             58999999999842              24556777888888887 57744  56665543321    2222222 357


Q ss_pred             EEEec
Q 018512          184 LLGVT  188 (354)
Q Consensus       184 viG~t  188 (354)
                      ++|+-
T Consensus       184 ~iG~H  188 (460)
T 3k6j_A          184 LVGIH  188 (460)
T ss_dssp             EEEEE
T ss_pred             eEEEE
Confidence            77764

>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=98.20  E-value=6.4e-06  Score=77.42  Aligned_cols=173  Identities=14%  Similarity=0.052  Sum_probs=98.4

Q ss_pred             CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCCCCeEEEEe----CCCcHHhhhC--CCc
Q 018512           41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL----GQPQLENALT--GMD  112 (354)
Q Consensus        41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~~~~v~~~~----~~~d~~~al~--~aD  112 (354)
                      ..|+|.|+||+|++|++++..|+..|.  +|+++|++.  ......++.... ...+..+.    ...++.++++  ++|
T Consensus         4 ~~~~vlVTGatG~iG~~l~~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~d~~~~~~~~~~~~~d   80 (341)
T 3enk_A            4 TKGTILVTGGAGYIGSHTAVELLAHGY--DVVIADNLVNSKREAIARIEKIT-GKTPAFHETDVSDERALARIFDAHPIT   80 (341)
T ss_dssp             SSCEEEEETTTSHHHHHHHHHHHHTTC--EEEEECCCSSSCTHHHHHHHHHH-SCCCEEECCCTTCHHHHHHHHHHSCCC
T ss_pred             CCcEEEEecCCcHHHHHHHHHHHHCCC--cEEEEecCCcchHHHHHHHHhhc-CCCceEEEeecCCHHHHHHHHhccCCc
Confidence            347999999999999999999999998  899999875  222222222110 01112111    1123455666  899


Q ss_pred             EEEEcCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCCchHHHHHHHHHhCCCCCCCEEEeccc
Q 018512          113 LVIIPAGVPRKP--GMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTML  190 (354)
Q Consensus       113 vVIi~ag~~~~~--g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~~~~~~~~~~p~~kviG~t~l  190 (354)
                      +||++|+.....  .....+.+..|+....++++.+++.+...+|.+.|.-+.....  ...+......++...+|.+..
T Consensus        81 ~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~g~~~--~~~~~e~~~~~~~~~Y~~sK~  158 (341)
T 3enk_A           81 AAIHFAALKAVGESVAKPIEYYRNNLDSLLSLLRVMRERAVKRIVFSSSATVYGVPE--RSPIDETFPLSATNPYGQTKL  158 (341)
T ss_dssp             EEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGBCSCS--SSSBCTTSCCBCSSHHHHHHH
T ss_pred             EEEECccccccCccccChHHHHHHHHHHHHHHHHHHHhCCCCEEEEEecceEecCCC--CCCCCCCCCCCCCChhHHHHH
Confidence            999999864311  1123456788999999999999987665555544411100000  000001111223334555554


Q ss_pred             hHHHHHHHHHHHhC-CCCCCCc-ceEEeec
Q 018512          191 DVVRANTFVAEVLG-LDPRDVD-VPVVGGH  218 (354)
Q Consensus       191 d~~r~~~~la~~l~-v~~~~v~-~~v~G~h  218 (354)
                      ...++...+++.++ ++..-++ +.++|.+
T Consensus       159 ~~e~~~~~~~~~~~~~~~~~lRp~~v~G~~  188 (341)
T 3enk_A          159 MAEQILRDVEAADPSWRVATLRYFNPVGAH  188 (341)
T ss_dssp             HHHHHHHHHHHHCTTCEEEEEEECEEECCC
T ss_pred             HHHHHHHHHhhcCCCceEEEEeeccccCCc
Confidence            55556566666654 4433333 4567754

>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}

Probab=98.20  E-value=8e-06  Score=80.93  Aligned_cols=109  Identities=17%  Similarity=0.196  Sum_probs=71.7

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcC--CC--------------CCeEEEEeCCCcHHh
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHM--DT--------------GAVVRGFLGQPQLEN  106 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~--~~--------------~~~v~~~~~~~d~~~  106 (354)
                      |||+|||+ |.+|..+|..|+..|+  +|+++|+++.+.  ..+...  ..              ...++.   ++|+++
T Consensus         3 mkI~VIG~-G~vG~~lA~~La~~G~--~V~~~D~~~~~v--~~l~~g~~~i~e~gl~~~l~~~~~~~~l~~---t~d~~e   74 (450)
T 3gg2_A            3 LDIAVVGI-GYVGLVSATCFAELGA--NVRCIDTDRNKI--EQLNSGTIPIYEPGLEKMIARNVKAGRLRF---GTEIEQ   74 (450)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTC--EEEEECSCHHHH--HHHHHTCSCCCSTTHHHHHHHHHHTTSEEE---ESCHHH
T ss_pred             CEEEEECc-CHHHHHHHHHHHhcCC--EEEEEECCHHHH--HHHHcCCCcccCCCHHHHHHhhcccCcEEE---ECCHHH
Confidence            79999999 9999999999999998  999999986211  112111  00              122443   357788


Q ss_pred             hhCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEec-CCCCCc
Q 018512          107 ALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLIS-NPVNST  165 (354)
Q Consensus       107 al~~aDvVIi~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~-p~a~viv~t-NPv~~~  165 (354)
                      ++++||+||++.+.|.+.+.      ..++..+.++++.+.++. ++.+|+..| .|.+..
T Consensus        75 a~~~aDvViiaVptp~~~~~------~~dl~~v~~v~~~i~~~l~~g~iVV~~STv~pgt~  129 (450)
T 3gg2_A           75 AVPEADIIFIAVGTPAGEDG------SADMSYVLDAARSIGRAMSRYILIVTKSTVPVGSY  129 (450)
T ss_dssp             HGGGCSEEEECCCCCBCTTS------SBCCHHHHHHHHHHHHHCCSCEEEEECSCCCTTHH
T ss_pred             HHhcCCEEEEEcCCCcccCC------CcChHHHHHHHHHHHhhCCCCCEEEEeeeCCCcch
Confidence            89999999999877754322      123345556666666665 455555544 455543

>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}

Probab=98.18  E-value=1.6e-05  Score=79.33  Aligned_cols=119  Identities=15%  Similarity=0.128  Sum_probs=76.4

Q ss_pred             CCCeEEEEcCCCchHHHHHHHHHhC-CCCcEEEEEecCCc--hhHHHHHhcCCC------------------CCeEEEEe
Q 018512           41 AGFKVAILGAAGGIGQPLAMLMKIN-PLVSVLHLYDVVNT--PGVTADISHMDT------------------GAVVRGFL   99 (354)
Q Consensus        41 ~~~kI~IiGa~G~vG~~~a~~l~~~-~~~~ei~L~D~~~~--~g~~~dl~~~~~------------------~~~v~~~~   99 (354)
                      +.|||+|||+ |.+|..+|..|+.. |+. +|+++|+++.  .+.+..+.....                  ...+..  
T Consensus        17 ~~mkIaVIGl-G~mG~~lA~~la~~~G~~-~V~~~D~~~~~~~~kv~~l~~g~~~i~~~e~gl~~l~~~~~~~g~l~~--   92 (478)
T 3g79_A           17 PIKKIGVLGM-GYVGIPAAVLFADAPCFE-KVLGFQRNSKSSGYKIEMLNRGESPLKGEEPGLEELIGKVVKAGKFEC--   92 (478)
T ss_dssp             SCCEEEEECC-STTHHHHHHHHHHSTTCC-EEEEECCCCTTTTTHHHHHTTTCCCSSCCGGGHHHHHHHHHHTTCEEE--
T ss_pred             CCCEEEEECc-CHHHHHHHHHHHHhCCCC-eEEEEECChhHhHHHHHHHHhcCCCccccCCCHHHHHHhhcccCCeEE--
Confidence            4689999999 99999999999998 764 8999999873  234444543210                  122443  


Q ss_pred             CCCcHHhhhCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEe-cCCCCCchHHH
Q 018512          100 GQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLI-SNPVNSTVPIA  169 (354)
Q Consensus       100 ~~~d~~~al~~aDvVIi~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~-p~a~viv~-tNPv~~~~~~~  169 (354)
                       ++| .+++++||+||++.+.|......+    ..++..+...++.+.++. +..+|++. |-|.+..-.+.
T Consensus        93 -ttd-~ea~~~aDvViiaVptp~~~~~~~----~~dl~~v~~~~~~i~~~l~~g~iVV~~STv~pgtt~~v~  158 (478)
T 3g79_A           93 -TPD-FSRISELDAVTLAIQTPFANPKDL----EPDFSALIDGIRNVGKYLKPGMLVVLESTITPGTTEGMA  158 (478)
T ss_dssp             -ESC-GGGGGGCSEEEECCCCCCCSSCCS----SCCCHHHHHHHHHHHHHCCTTCEEEECSCCCTTTTTTHH
T ss_pred             -eCc-HHHHhcCCEEEEecCCchhccCCc----cccHHHHHHHHHHHHhhcCCCcEEEEeCCCChHHHHHHH
Confidence             346 588999999999988775432210    012334455555666555 45555544 56666554443

>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}

Probab=98.18  E-value=4.3e-06  Score=83.52  Aligned_cols=127  Identities=18%  Similarity=0.209  Sum_probs=78.0

Q ss_pred             CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCC---------------CCeEEEEeCCCcHH
Q 018512           41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDT---------------GAVVRGFLGQPQLE  105 (354)
Q Consensus        41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~---------------~~~v~~~~~~~d~~  105 (354)
                      ++|||+|||+ |.||..+|..|+..++..+|+++|+++.+  +..+.....               ...++.   ++++.
T Consensus         8 ~~mkI~VIG~-G~vG~~~A~~La~~g~g~~V~~~D~~~~~--v~~l~~g~~~i~e~gl~~~~~~~~~~~l~~---t~~~~   81 (481)
T 2o3j_A            8 KVSKVVCVGA-GYVGGPTCAMIAHKCPHITVTVVDMNTAK--IAEWNSDKLPIYEPGLDEIVFAARGRNLFF---SSDIP   81 (481)
T ss_dssp             CCCEEEEECC-STTHHHHHHHHHHHCTTSEEEEECSCHHH--HHHHTSSSCSSCCTTHHHHHHHHBTTTEEE---ESCHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEECCHHH--HHHHHCCCCCcCCCCHHHHHHHhhcCCEEE---ECCHH
Confidence            4579999999 99999999999987433399999997521  122222100               012333   35667


Q ss_pred             hhhCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEe-cCCCCCchHHHHHHHHH
Q 018512          106 NALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLI-SNPVNSTVPIAAEVFKK  175 (354)
Q Consensus       106 ~al~~aDvVIi~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~-p~a~viv~-tNPv~~~~~~~~~~~~~  175 (354)
                      +++++||+||++.+.|.+.+.++.+ -..++..+.+.++.+.++. ++.+|+.. |+|++..-.+ .+.+.+
T Consensus        82 ~~~~~aDvvii~Vptp~~~~g~~~~-~~~dl~~v~~~~~~i~~~l~~g~iVV~~STv~~gt~~~l-~~~l~~  151 (481)
T 2o3j_A           82 KAIAEADLIFISVNTPTKMYGRGKG-MAPDLKYVESVSRTIAQYAGGPKIVVEKSTVPVKAAESI-GCILRE  151 (481)
T ss_dssp             HHHHHCSEEEECCCCCBCCSSTTTT-TSBCCHHHHHHHHHHHHHCCSCEEEEECSCCCTTHHHHH-HHHHHH
T ss_pred             HHhhcCCEEEEecCCcccccccccc-CCCcHHHHHHHHHHHHHhCCCCCEEEECCCCCCCHHHHH-HHHHHH
Confidence            8899999999998877643222111 0112334556666666665 45555543 6888765443 234443

>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}

Probab=98.16  E-value=1.2e-05  Score=74.38  Aligned_cols=92  Identities=17%  Similarity=0.197  Sum_probs=66.6

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcCCCCC
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVPR  122 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~ag~~~  122 (354)
                      |||.|+||+|++|++++..|+.+|+  +|+.+.+++..            ..+..  ...+ .++++++|.||++|+..-
T Consensus         1 MkILVTGatGfIG~~L~~~L~~~G~--~V~~l~R~~~~------------~~~~~--~~~~-~~~l~~~d~vihla~~~i   63 (298)
T 4b4o_A            1 MRVLVGGGTGFIGTALTQLLNARGH--EVTLVSRKPGP------------GRITW--DELA-ASGLPSCDAAVNLAGENI   63 (298)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESSCCT------------TEEEH--HHHH-HHCCCSCSEEEECCCCCS
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCC--EEEEEECCCCc------------Ceeec--chhh-HhhccCCCEEEEeccCcc
Confidence            8999999999999999999999998  99998876421            11111  0112 467899999999987532


Q ss_pred             CC-----CC-CHHHHHHHHHHHHHHHHHHHhhhCC
Q 018512          123 KP-----GM-TRDDLFNINAGIVRTLCEGIAKCCP  151 (354)
Q Consensus       123 ~~-----g~-~r~d~~~~n~~~~~~i~~~i~~~~p  151 (354)
                      ..     .. ...+....|+...+.+++.+.+...
T Consensus        64 ~~~~~~~~~~~~~~~~~~~v~~t~~l~~~~~~~~~   98 (298)
T 4b4o_A           64 LNPLRRWNETFQKEVLGSRLETTQLLAKAITKAPQ   98 (298)
T ss_dssp             SCTTSCCCHHHHHHHHHHHHHHHHHHHHHHHHCSS
T ss_pred             cchhhhhhhhhhhhhhhHHHHHHHHHHHHHHHhCC
Confidence            11     11 1345667789999999998887763

>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*

Probab=98.16  E-value=1.1e-05  Score=79.54  Aligned_cols=107  Identities=21%  Similarity=0.275  Sum_probs=68.7

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCC--C--------------CCeEEEEeCCCcHHh
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMD--T--------------GAVVRGFLGQPQLEN  106 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~--~--------------~~~v~~~~~~~d~~~  106 (354)
                      |||+|||+ |.||..++..|+..|+  +|+++|+++.+  +..+....  .              ...+..   ++++.+
T Consensus         1 mkI~VIG~-G~vG~~~A~~la~~G~--~V~~~d~~~~~--~~~l~~~~~~i~e~~l~~~~~~~~~~g~l~~---t~~~~~   72 (436)
T 1mv8_A            1 MRISIFGL-GYVGAVCAGCLSARGH--EVIGVDVSSTK--IDLINQGKSPIVEPGLEALLQQGRQTGRLSG---TTDFKK   72 (436)
T ss_dssp             CEEEEECC-STTHHHHHHHHHHTTC--EEEEECSCHHH--HHHHHTTCCSSCCTTHHHHHHHHHHTTCEEE---ESCHHH
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCC--EEEEEECCHHH--HHHHhCCCCCcCCCCHHHHHHhhcccCceEE---eCCHHH
Confidence            69999998 9999999999999988  89999997521  11122210  0              112443   356777


Q ss_pred             hhCCCcEEEEcCCCCCCC-CCCHHHHHHHHHHHHHHHHHHHhhh-CC---CeEEEEe-cCCCCC
Q 018512          107 ALTGMDLVIIPAGVPRKP-GMTRDDLFNINAGIVRTLCEGIAKC-CP---NATVNLI-SNPVNS  164 (354)
Q Consensus       107 al~~aDvVIi~ag~~~~~-g~~r~d~~~~n~~~~~~i~~~i~~~-~p---~a~viv~-tNPv~~  164 (354)
                      ++++||+||++.+.|... |..       ++..+.+.++.+.++ .+   +.+|+.. |+|.+.
T Consensus        73 ~~~~aDvviiaVptp~~~~~~~-------dl~~v~~v~~~i~~~l~~~~~~~iVV~~Stv~~g~  129 (436)
T 1mv8_A           73 AVLDSDVSFICVGTPSKKNGDL-------DLGYIETVCREIGFAIREKSERHTVVVRSTVLPGT  129 (436)
T ss_dssp             HHHTCSEEEECCCCCBCTTSSB-------CCHHHHHHHHHHHHHHTTCCSCCEEEECSCCCTTH
T ss_pred             HhccCCEEEEEcCCCcccCCCc-------chHHHHHHHHHHHHHhcccCCCcEEEEeCCcCCCc
Confidence            899999999998766532 221       122333344444433 24   5666554 688876

>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*

Probab=98.15  E-value=9.9e-06  Score=76.85  Aligned_cols=113  Identities=10%  Similarity=0.083  Sum_probs=74.2

Q ss_pred             CCCeEEEEcCCCchHHHHHHHHHhCC-CCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhC-----CCcEE
Q 018512           41 AGFKVAILGAAGGIGQPLAMLMKINP-LVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALT-----GMDLV  114 (354)
Q Consensus        41 ~~~kI~IiGa~G~vG~~~a~~l~~~~-~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~-----~aDvV  114 (354)
                      +.|+|+|+||+|++|++++..|+..| .  +|+++|++........+.......++.   ....++++++     ++|+|
T Consensus        45 ~~~~vlVtGatG~iG~~l~~~L~~~g~~--~V~~~~r~~~~~~~~~~~~~~~~~d~~---~~~~~~~~~~~~~~~~~d~V  119 (357)
T 2x6t_A           45 EGRMIIVTGGAGFIGSNIVKALNDKGIT--DILVVDNLKDGTKFVNLVDLNIADYMD---KEDFLIQIMAGEEFGDVEAI  119 (357)
T ss_dssp             ---CEEEETTTSHHHHHHHHHHHHTTCC--CEEEEECCSSGGGGGGTTTSCCSEEEE---HHHHHHHHHTTCCCSSCCEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCc--EEEEEecCCCcchhhcccCceEeeecC---cHHHHHHHHhhcccCCCCEE
Confidence            34789999999999999999999988 6  899999865221111121111111111   1223445566     59999


Q ss_pred             EEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 018512          115 IIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  159 (354)
Q Consensus       115 Ii~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~t  159 (354)
                      |++|+..........+.+..|+....++++.+.+.+. .+|.+.|
T Consensus       120 ih~A~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~-r~V~~SS  163 (357)
T 2x6t_A          120 FHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLEREI-PFLYASS  163 (357)
T ss_dssp             EECCSCCCTTCCCHHHHHHHTHHHHHHHHHHHHHHTC-CEEEEEE
T ss_pred             EECCcccCCccCCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEcc
Confidence            9999865433345567788899999999999998766 4444433

>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}

Probab=98.15  E-value=5.7e-06  Score=83.15  Aligned_cols=104  Identities=15%  Similarity=0.112  Sum_probs=71.1

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcCCCC
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVP  121 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~ag~~  121 (354)
                      +|||+|+||+|++|++++..|+..|.  +|+.++++....     ..      +.. .......++++++|+||++|+..
T Consensus       147 ~m~VLVTGatG~IG~~l~~~L~~~G~--~V~~l~R~~~~~-----~~------v~~-d~~~~~~~~l~~~D~Vih~A~~~  212 (516)
T 3oh8_A          147 PLTVAITGSRGLVGRALTAQLQTGGH--EVIQLVRKEPKP-----GK------RFW-DPLNPASDLLDGADVLVHLAGEP  212 (516)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTC--EEEEEESSSCCT-----TC------EEC-CTTSCCTTTTTTCSEEEECCCC-
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCC--EEEEEECCCCCc-----cc------eee-cccchhHHhcCCCCEEEECCCCc
Confidence            78999999999999999999999988  999999876221     00      111 00112356789999999999865


Q ss_pred             CCC---CCCHHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEec
Q 018512          122 RKP---GMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLIS  159 (354)
Q Consensus       122 ~~~---g~~r~d~~~~n~~~~~~i~~~i~~~~-p~a~viv~t  159 (354)
                      ...   .....++...|+....++++.+.+.. ...+|.+.|
T Consensus       213 ~~~~~~~~~~~~~~~~Nv~gt~~ll~a~a~~~~~~r~V~~SS  254 (516)
T 3oh8_A          213 IFGRFNDSHKEAIRESRVLPTKFLAELVAESTQCTTMISASA  254 (516)
T ss_dssp             ----CCGGGHHHHHHHTHHHHHHHHHHHHHCSSCCEEEEEEE
T ss_pred             cccccchhHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEeCc
Confidence            321   12345567889999999999844433 444444444

>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}

Probab=98.15  E-value=9e-06  Score=78.11  Aligned_cols=114  Identities=15%  Similarity=0.202  Sum_probs=75.3

Q ss_pred             CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCC--------CCCeEEEEeCCCcHHhhhCCCc
Q 018512           41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMD--------TGAVVRGFLGQPQLENALTGMD  112 (354)
Q Consensus        41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~--------~~~~v~~~~~~~d~~~al~~aD  112 (354)
                      .+|||+|||+ |.+|++++..|...|+  +|.++|+++.......-.+..        ....+..   ++|+.+++++||
T Consensus        28 ~~mkI~VIGa-G~mG~alA~~La~~G~--~V~l~~r~~~~~~~i~~~~~~~~~l~g~~l~~~i~~---t~d~~ea~~~aD  101 (356)
T 3k96_A           28 FKHPIAILGA-GSWGTALALVLARKGQ--KVRLWSYESDHVDEMQAEGVNNRYLPNYPFPETLKA---YCDLKASLEGVT  101 (356)
T ss_dssp             CCSCEEEECC-SHHHHHHHHHHHTTTC--CEEEECSCHHHHHHHHHHSSBTTTBTTCCCCTTEEE---ESCHHHHHTTCC
T ss_pred             cCCeEEEECc-cHHHHHHHHHHHHCCC--eEEEEeCCHHHHHHHHHcCCCcccCCCCccCCCeEE---ECCHHHHHhcCC
Confidence            4589999999 9999999999999987  899999975211111111110        1122443   357788999999


Q ss_pred             EEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecCCCCCchHHHHHHHHHh
Q 018512          113 LVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNSTVPIAAEVFKKA  176 (354)
Q Consensus       113 vVIi~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~-p~a~viv~tNPv~~~~~~~~~~~~~~  176 (354)
                      +||++.  |              ...++++++.+..+. |+.+|+.++|..+.-+..+++.+.+.
T Consensus       102 vVilaV--p--------------~~~~~~vl~~i~~~l~~~~ivvs~~kGi~~~t~~~se~i~~~  150 (356)
T 3k96_A          102 DILIVV--P--------------SFAFHEVITRMKPLIDAKTRIAWGTKGLAKGSRLLHEVVATE  150 (356)
T ss_dssp             EEEECC--C--------------HHHHHHHHHHHGGGCCTTCEEEECCCSCBTTTBCHHHHHHHH
T ss_pred             EEEECC--C--------------HHHHHHHHHHHHHhcCCCCEEEEEeCCCCcCccCHHHHHHHH
Confidence            999984  2              125667778888776 57788888886654322223444443

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}

Probab=98.14  E-value=3.6e-06  Score=80.27  Aligned_cols=111  Identities=16%  Similarity=0.152  Sum_probs=74.8

Q ss_pred             CCCCeEEEEcCCCchHHHHHHHHHhC-CCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeC-----CCcHHhhhCCCcE
Q 018512           40 AAGFKVAILGAAGGIGQPLAMLMKIN-PLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLG-----QPQLENALTGMDL  113 (354)
Q Consensus        40 ~~~~kI~IiGa~G~vG~~~a~~l~~~-~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~-----~~d~~~al~~aDv  113 (354)
                      ..+|||.|+||+|++|++++..|+.. +.  +|+.+|++....  .++...   ..++.+..     ...+.++++++|+
T Consensus        22 m~~~~vlVtGatG~iG~~l~~~L~~~~g~--~V~~~~r~~~~~--~~~~~~---~~v~~~~~Dl~~d~~~~~~~~~~~d~   94 (372)
T 3slg_A           22 MKAKKVLILGVNGFIGHHLSKRILETTDW--EVFGMDMQTDRL--GDLVKH---ERMHFFEGDITINKEWVEYHVKKCDV   94 (372)
T ss_dssp             -CCCEEEEESCSSHHHHHHHHHHHHHSSC--EEEEEESCCTTT--GGGGGS---TTEEEEECCTTTCHHHHHHHHHHCSE
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHhCCCC--EEEEEeCChhhh--hhhccC---CCeEEEeCccCCCHHHHHHHhccCCE
Confidence            44679999999999999999999887 77  999999876210  111111   12222211     1234567889999


Q ss_pred             EEEcCCCCCCCC--CCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 018512          114 VIIPAGVPRKPG--MTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  159 (354)
Q Consensus       114 VIi~ag~~~~~g--~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~t  159 (354)
                      ||++|+......  ....+.+..|+....++++.+++.+ . .+|.+|
T Consensus        95 Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~-~-~~v~~S  140 (372)
T 3slg_A           95 ILPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYG-K-HLVFPS  140 (372)
T ss_dssp             EEECBCCCCHHHHHHCHHHHHHHHTTTTHHHHHHHHHHT-C-EEEEEC
T ss_pred             EEEcCccccHHHHhhCHHHHHHHHHHHHHHHHHHHHHhC-C-cEEEeC
Confidence            999988653211  1334567889999999999999887 4 444444

>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2

Probab=98.12  E-value=1.7e-05  Score=73.27  Aligned_cols=110  Identities=10%  Similarity=0.094  Sum_probs=74.6

Q ss_pred             eEEEEcCCCchHHHHHHHHHhCC-CCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCC-----CcEEEEc
Q 018512           44 KVAILGAAGGIGQPLAMLMKINP-LVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTG-----MDLVIIP  117 (354)
Q Consensus        44 kI~IiGa~G~vG~~~a~~l~~~~-~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~-----aDvVIi~  117 (354)
                      ||.|+||+|++|++++..|+..| .  +|+++++........++.......++.   ....+.+++++     +|+||++
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~g~~--~V~~~~r~~~~~~~~~~~~~~~~~d~~---~~~~~~~~~~~~~~~~~d~vi~~   75 (310)
T 1eq2_A            1 MIIVTGGAGFIGSNIVKALNDKGIT--DILVVDNLKDGTKFVNLVDLNIADYMD---KEDFLIQIMAGEEFGDVEAIFHE   75 (310)
T ss_dssp             CEEEETTTSHHHHHHHHHHHTTTCC--CEEEEECCSSGGGGHHHHTSCCSEEEE---HHHHHHHHHTTCCCSSCCEEEEC
T ss_pred             CEEEEcCccHHHHHHHHHHHHCCCc--EEEEEccCCCCchhhhcCcceeccccc---cHHHHHHHHhccccCCCcEEEEC
Confidence            58999999999999999999988 6  899999875221111222211111121   12234566664     9999999


Q ss_pred             CCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 018512          118 AGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  159 (354)
Q Consensus       118 ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~t  159 (354)
                      |+..........+.+..|+....++++.+.+.+. .+|.+.|
T Consensus        76 a~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS  116 (310)
T 1eq2_A           76 GACSSTTEWDGKYMMDNNYQYSKELLHYCLEREI-PFLYASS  116 (310)
T ss_dssp             CSCCCTTCCCHHHHHHHTHHHHHHHHHHHHHHTC-CEEEEEE
T ss_pred             cccccCcccCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEee
Confidence            9865443345566788899999999999998876 4444333

>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*

Probab=98.12  E-value=8.7e-06  Score=79.46  Aligned_cols=112  Identities=18%  Similarity=0.271  Sum_probs=71.3

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCC--------------CCeEEEEeCCCcHHhhh
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDT--------------GAVVRGFLGQPQLENAL  108 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~--------------~~~v~~~~~~~d~~~al  108 (354)
                      |||+|||+ |.||..++..|+. ++  +|+++|+++.+  +..+.....              ...+..   ++++.+++
T Consensus         1 MkI~VIG~-G~vG~~~A~~La~-G~--~V~~~d~~~~~--~~~l~~~~~~i~e~~l~~~~~~~~~~l~~---t~~~~~~~   71 (402)
T 1dlj_A            1 MKIAVAGS-GYVGLSLGVLLSL-QN--EVTIVDILPSK--VDKINNGLSPIQDEYIEYYLKSKQLSIKA---TLDSKAAY   71 (402)
T ss_dssp             CEEEEECC-SHHHHHHHHHHTT-TS--EEEEECSCHHH--HHHHHTTCCSSCCHHHHHHHHHSCCCEEE---ESCHHHHH
T ss_pred             CEEEEECC-CHHHHHHHHHHhC-CC--EEEEEECCHHH--HHHHHcCCCCcCCCCHHHHHHhccCcEEE---eCCHHHHh
Confidence            69999999 9999999999988 76  99999997521  122222110              012333   34666889


Q ss_pred             CCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEE-ecCCCCCchHH
Q 018512          109 TGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNL-ISNPVNSTVPI  168 (354)
Q Consensus       109 ~~aDvVIi~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv-~tNPv~~~~~~  168 (354)
                      ++||+||++...+...+..+.|+     ..+.+.++.+.+..|+.+|+. .|||.+....+
T Consensus        72 ~~aDvviiavpt~~~~~~~~~dl-----~~v~~v~~~i~~l~~~~iVV~~ST~~~g~~~~l  127 (402)
T 1dlj_A           72 KEAELVIIATPTNYNSRINYFDT-----QHVETVIKEVLSVNSHATLIIKSTIPIGFITEM  127 (402)
T ss_dssp             HHCSEEEECCCCCEETTTTEECC-----HHHHHHHHHHHHHCSSCEEEECSCCCTTHHHHH
T ss_pred             cCCCEEEEecCCCcccCCCCccH-----HHHHHHHHHHHhhCCCCEEEEeCCCCccHHHHH
Confidence            99999999976663222222221     233344444444456777666 68999886544

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*

Probab=98.11  E-value=5.1e-06  Score=79.04  Aligned_cols=114  Identities=17%  Similarity=0.214  Sum_probs=77.7

Q ss_pred             CCCeEEEEcCCCchHHHHHHHHHhC-CCCcEEEEEecCCch--hHHHHHhcCCCCCeEEEEeC----CCcHHhhhCCCcE
Q 018512           41 AGFKVAILGAAGGIGQPLAMLMKIN-PLVSVLHLYDVVNTP--GVTADISHMDTGAVVRGFLG----QPQLENALTGMDL  113 (354)
Q Consensus        41 ~~~kI~IiGa~G~vG~~~a~~l~~~-~~~~ei~L~D~~~~~--g~~~dl~~~~~~~~v~~~~~----~~d~~~al~~aDv  113 (354)
                      +.++|.|+||+|++|+.++..|+.. |. .+|+++|+++..  ....++..    ..+..+..    ...+.++++++|+
T Consensus        20 ~~k~vlVTGatG~iG~~l~~~L~~~~g~-~~V~~~~r~~~~~~~~~~~~~~----~~v~~~~~Dl~d~~~l~~~~~~~D~   94 (344)
T 2gn4_A           20 DNQTILITGGTGSFGKCFVRKVLDTTNA-KKIIVYSRDELKQSEMAMEFND----PRMRFFIGDVRDLERLNYALEGVDI   94 (344)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHCCC-SEEEEEESCHHHHHHHHHHHCC----TTEEEEECCTTCHHHHHHHTTTCSE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHhhCCC-CEEEEEECChhhHHHHHHHhcC----CCEEEEECCCCCHHHHHHHHhcCCE
Confidence            4579999999999999999999887 64 289999997521  12222322    12332211    1234578899999


Q ss_pred             EEEcCCCCCCCC--CCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 018512          114 VIIPAGVPRKPG--MTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  159 (354)
Q Consensus       114 VIi~ag~~~~~g--~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~t  159 (354)
                      ||++|+....+.  ....+.+..|+....++++.+.+.+...+|.+.|
T Consensus        95 Vih~Aa~~~~~~~~~~~~~~~~~Nv~gt~~l~~aa~~~~v~~~V~~SS  142 (344)
T 2gn4_A           95 CIHAAALKHVPIAEYNPLECIKTNIMGASNVINACLKNAISQVIALST  142 (344)
T ss_dssp             EEECCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred             EEECCCCCCCCchhcCHHHHHHHHHHHHHHHHHHHHhCCCCEEEEecC
Confidence            999998654211  1235677889999999999999876555554444

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*

Probab=98.11  E-value=6.3e-06  Score=72.87  Aligned_cols=99  Identities=19%  Similarity=0.247  Sum_probs=65.8

Q ss_pred             CCe-EEEEcCCCchHHHHHHHHH-hCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeC----CCcHHhhhCCCcEEE
Q 018512           42 GFK-VAILGAAGGIGQPLAMLMK-INPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLG----QPQLENALTGMDLVI  115 (354)
Q Consensus        42 ~~k-I~IiGa~G~vG~~~a~~l~-~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~----~~d~~~al~~aDvVI  115 (354)
                      +|| |.|+||+|++|+.++..|+ ..|.  +|+++++++.. ...++....  ..+..+..    ..++.++++++|+||
T Consensus         4 mmk~vlVtGasg~iG~~~~~~l~~~~g~--~V~~~~r~~~~-~~~~~~~~~--~~~~~~~~D~~d~~~~~~~~~~~d~vv   78 (221)
T 3r6d_A            4 MYXYITILGAAGQIAQXLTATLLTYTDM--HITLYGRQLKT-RIPPEIIDH--ERVTVIEGSFQNPGXLEQAVTNAEVVF   78 (221)
T ss_dssp             SCSEEEEESTTSHHHHHHHHHHHHHCCC--EEEEEESSHHH-HSCHHHHTS--TTEEEEECCTTCHHHHHHHHTTCSEEE
T ss_pred             eEEEEEEEeCCcHHHHHHHHHHHhcCCc--eEEEEecCccc-cchhhccCC--CceEEEECCCCCHHHHHHHHcCCCEEE
Confidence            455 9999999999999999999 7888  89999986420 111221111  12222211    124567889999999


Q ss_pred             EcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 018512          116 IPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  159 (354)
Q Consensus       116 i~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~t  159 (354)
                      +++|..             |+. .+.+++.+++.+...+|.+.|
T Consensus        79 ~~ag~~-------------n~~-~~~~~~~~~~~~~~~iv~iSs  108 (221)
T 3r6d_A           79 VGAMES-------------GSD-MASIVKALSRXNIRRVIGVSM  108 (221)
T ss_dssp             ESCCCC-------------HHH-HHHHHHHHHHTTCCEEEEEEE
T ss_pred             EcCCCC-------------Chh-HHHHHHHHHhcCCCeEEEEee
Confidence            998743             444 788888888776555544444

>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2

Probab=98.10  E-value=3.1e-06  Score=77.87  Aligned_cols=101  Identities=21%  Similarity=0.175  Sum_probs=71.2

Q ss_pred             CCCCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhC--CCcEEE
Q 018512           38 GGAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALT--GMDLVI  115 (354)
Q Consensus        38 ~~~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~--~aDvVI  115 (354)
                      ++..++||+|+||+|++|++++..|+..|.  +|+.+|++.     .|+.+            ..++.++++  ++|+||
T Consensus         8 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~-----~Dl~d------------~~~~~~~~~~~~~d~vi   68 (292)
T 1vl0_A            8 HHHHHMKILITGANGQLGREIQKQLKGKNV--EVIPTDVQD-----LDITN------------VLAVNKFFNEKKPNVVI   68 (292)
T ss_dssp             ----CEEEEEESTTSHHHHHHHHHHTTSSE--EEEEECTTT-----CCTTC------------HHHHHHHHHHHCCSEEE
T ss_pred             cccccceEEEECCCChHHHHHHHHHHhCCC--eEEeccCcc-----CCCCC------------HHHHHHHHHhcCCCEEE
Confidence            466788999999999999999999998886  899999852     11211            123456666  799999


Q ss_pred             EcCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 018512          116 IPAGVPRKP--GMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  159 (354)
Q Consensus       116 i~ag~~~~~--g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~t  159 (354)
                      ++|+.....  .....+.+..|+....++++.+.+.+.  .+|++|
T Consensus        69 h~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~--~iv~~S  112 (292)
T 1vl0_A           69 NCAAHTAVDKCEEQYDLAYKINAIGPKNLAAAAYSVGA--EIVQIS  112 (292)
T ss_dssp             ECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHTC--EEEEEE
T ss_pred             ECCccCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHcCC--eEEEec
Confidence            999864311  123456678899999999999998765  444443

>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}

Probab=98.09  E-value=2.1e-05  Score=78.13  Aligned_cols=121  Identities=15%  Similarity=0.212  Sum_probs=75.5

Q ss_pred             CCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--c-hhHH--H----H------HhcCCC-CCeEEEEeCCCc
Q 018512           40 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--T-PGVT--A----D------ISHMDT-GAVVRGFLGQPQ  103 (354)
Q Consensus        40 ~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~-~g~~--~----d------l~~~~~-~~~v~~~~~~~d  103 (354)
                      .+.+||+|||+ |.+|..+|..|+..|+  +|+++|+++  . .+..  .    .      +..... ....+.   +++
T Consensus        35 ~~~~kV~VIGa-G~MG~~iA~~la~~G~--~V~l~D~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i---~~~  108 (463)
T 1zcj_A           35 QPVSSVGVLGL-GTMGRGIAISFARVGI--SVVAVESDPKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLRF---SSS  108 (463)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHTTTC--EEEEECSSHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCEEE---ESC
T ss_pred             CCCCEEEEECc-CHHHHHHHHHHHhCCC--eEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhhh---cCC
Confidence            34579999999 9999999999999998  999999986  1 1110  0    0      111111 111232   346


Q ss_pred             HHhhhCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecCCCCCchHHHHHHHHHhCCCCCC
Q 018512          104 LENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNSTVPIAAEVFKKAGTYDPK  182 (354)
Q Consensus       104 ~~~al~~aDvVIi~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~-p~a~viv~tNPv~~~~~~~~~~~~~~~~~p~~  182 (354)
                      + +++++||+||++..              .+..+.+++.+.+.+++ |+++|  +||.+.+...-    +...... +.
T Consensus       109 ~-~~~~~aDlVIeaVp--------------e~~~~k~~v~~~l~~~~~~~~ii--~snTs~~~~~~----la~~~~~-~~  166 (463)
T 1zcj_A          109 T-KELSTVDLVVEAVF--------------EDMNLKKKVFAELSALCKPGAFL--CTNTSALNVDD----IASSTDR-PQ  166 (463)
T ss_dssp             G-GGGTTCSEEEECCC--------------SCHHHHHHHHHHHHHHSCTTCEE--EECCSSSCHHH----HHTTSSC-GG
T ss_pred             H-HHHCCCCEEEEcCC--------------CCHHHHHHHHHHHHhhCCCCeEE--EeCCCCcCHHH----HHHHhcC-Cc
Confidence            5 67999999999852              13455666777777777 46644  45777655422    2232222 35


Q ss_pred             CEEEec
Q 018512          183 KLLGVT  188 (354)
Q Consensus       183 kviG~t  188 (354)
                      +++|+-
T Consensus       167 ~~ig~h  172 (463)
T 1zcj_A          167 LVIGTH  172 (463)
T ss_dssp             GEEEEE
T ss_pred             ceEEee
Confidence            677763

>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*

Probab=98.09  E-value=1.3e-05  Score=78.92  Aligned_cols=115  Identities=20%  Similarity=0.251  Sum_probs=68.8

Q ss_pred             CCCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCC--------------CCeEEEEeCCCcH
Q 018512           39 GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDT--------------GAVVRGFLGQPQL  104 (354)
Q Consensus        39 ~~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~--------------~~~v~~~~~~~d~  104 (354)
                      .++.|||+|||+ |.+|..+|..|+. |+  +|+++|+++.+  +..+.....              ...++.   ++|+
T Consensus        33 ~~~~mkIaVIGl-G~mG~~lA~~La~-G~--~V~~~D~~~~~--v~~l~~g~~~i~e~~l~~ll~~~~~~l~~---ttd~  103 (432)
T 3pid_A           33 GSEFMKITISGT-GYVGLSNGVLIAQ-NH--EVVALDIVQAK--VDMLNQKISPIVDKEIQEYLAEKPLNFRA---TTDK  103 (432)
T ss_dssp             --CCCEEEEECC-SHHHHHHHHHHHT-TS--EEEEECSCHHH--HHHHHTTCCSSCCHHHHHHHHHSCCCEEE---ESCH
T ss_pred             ccCCCEEEEECc-CHHHHHHHHHHHc-CC--eEEEEecCHHH--hhHHhccCCccccccHHHHHhhccCCeEE---EcCH
Confidence            455689999999 9999999998887 76  99999998621  111221100              112443   4577


Q ss_pred             HhhhCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEe-cCCCCCchH
Q 018512          105 ENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLI-SNPVNSTVP  167 (354)
Q Consensus       105 ~~al~~aDvVIi~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~-tNPv~~~~~  167 (354)
                      ++++++||+||++...+........|     +..+.+.++.+.+..|..+|+.. |.|.+..-.
T Consensus       104 ~ea~~~aDvViiaVPt~~~~~~~~~D-----l~~V~~v~~~i~~l~~g~iVV~~STv~pgtt~~  162 (432)
T 3pid_A          104 HDAYRNADYVIIATPTDYDPKTNYFN-----TSTVEAVIRDVTEINPNAVMIIKSTIPVGFTRD  162 (432)
T ss_dssp             HHHHTTCSEEEECCCCEEETTTTEEE-----CHHHHHHHHHHHHHCTTSEEEECSCCCTTHHHH
T ss_pred             HHHHhCCCEEEEeCCCcccccccccc-----HHHHHHHHHHHHhcCCCcEEEEeCCCChHHHHH
Confidence            88999999999986544222111111     22333333444444567666554 577765543

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*

Probab=98.08  E-value=7.9e-06  Score=77.45  Aligned_cols=113  Identities=17%  Similarity=0.142  Sum_probs=73.7

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCCCCeEEEEeC-C---CcHHhhhCC--CcE
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLG-Q---PQLENALTG--MDL  113 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~~~~v~~~~~-~---~d~~~al~~--aDv  113 (354)
                      .|+|.|+||+|++|++++..|+..|.  +|+++|++.  .......+.. .  ..+..+.. -   .++.+++++  +|+
T Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~-~--~~~~~~~~Dl~d~~~~~~~~~~~~~d~   83 (357)
T 1rkx_A            9 GKRVFVTGHTGFKGGWLSLWLQTMGA--TVKGYSLTAPTVPSLFETARV-A--DGMQSEIGDIRDQNKLLESIREFQPEI   83 (357)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESSCSSSSCHHHHTTT-T--TTSEEEECCTTCHHHHHHHHHHHCCSE
T ss_pred             CCEEEEECCCchHHHHHHHHHHhCCC--eEEEEeCCCcccchhhHhhcc-C--CceEEEEccccCHHHHHHHHHhcCCCE
Confidence            46999999999999999999999887  999999876  2222221211 1  11222111 1   224455665  899


Q ss_pred             EEEcCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 018512          114 VIIPAGVPRKP--GMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  159 (354)
Q Consensus       114 VIi~ag~~~~~--g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~t  159 (354)
                      ||++|+.+...  .....+.+..|+.....+++.+.+......+|++|
T Consensus        84 vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~S  131 (357)
T 1rkx_A           84 VFHMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNIT  131 (357)
T ss_dssp             EEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEEC
T ss_pred             EEECCCCcccccchhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEec
Confidence            99999864211  11234567889999999999998875333445444

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*

Probab=98.07  E-value=3e-05  Score=67.05  Aligned_cols=104  Identities=15%  Similarity=0.165  Sum_probs=69.7

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeC----CCcHHhhhCCCcEEEEcC
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLG----QPQLENALTGMDLVIIPA  118 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~----~~d~~~al~~aDvVIi~a  118 (354)
                      |||.|+||+|++|+.++..|+..|.  +|+++++++..     +.... ...+..+..    ..++.++++++|+||+++
T Consensus         4 ~~ilVtGatG~iG~~l~~~l~~~g~--~V~~~~r~~~~-----~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a   75 (206)
T 1hdo_A            4 KKIAIFGATGQTGLTTLAQAVQAGY--EVTVLVRDSSR-----LPSEG-PRPAHVVVGDVLQAADVDKTVAGQDAVIVLL   75 (206)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTC--EEEEEESCGGG-----SCSSS-CCCSEEEESCTTSHHHHHHHHTTCSEEEECC
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCC--eEEEEEeChhh-----ccccc-CCceEEEEecCCCHHHHHHHHcCCCEEEECc
Confidence            7999999999999999999999887  99999987521     11110 112222111    123567889999999998


Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 018512          119 GVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  159 (354)
Q Consensus       119 g~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~t  159 (354)
                      +.......     ...|+.....+++.+++...+.+|.+.|
T Consensus        76 ~~~~~~~~-----~~~n~~~~~~~~~~~~~~~~~~~v~~Ss  111 (206)
T 1hdo_A           76 GTRNDLSP-----TTVMSEGARNIVAAMKAHGVDKVVACTS  111 (206)
T ss_dssp             CCTTCCSC-----CCHHHHHHHHHHHHHHHHTCCEEEEECC
T ss_pred             cCCCCCCc-----cchHHHHHHHHHHHHHHhCCCeEEEEee
Confidence            86532111     1357788888899888876554443333

>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A

Probab=98.07  E-value=1.7e-05  Score=74.49  Aligned_cols=167  Identities=14%  Similarity=0.066  Sum_probs=94.9

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhC-CCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeC--C---CcHHhhhCCCcEEEE
Q 018512           43 FKVAILGAAGGIGQPLAMLMKIN-PLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLG--Q---PQLENALTGMDLVII  116 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~-~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~--~---~d~~~al~~aDvVIi  116 (354)
                      |||.|+||+|++|++++..|+.. +.  +|+++|++....  .++..   ...+..+..  +   ..+.++++++|+||+
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~~g~--~V~~~~r~~~~~--~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~d~vih   73 (345)
T 2bll_A            1 MRVLILGVNGFIGNHLTERLLREDHY--EVYGLDIGSDAI--SRFLN---HPHFHFVEGDISIHSEWIEYHVKKCDVVLP   73 (345)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHSTTC--EEEEEESCCGGG--GGGTT---CTTEEEEECCTTTCSHHHHHHHHHCSEEEE
T ss_pred             CeEEEECCCcHHHHHHHHHHHHhCCC--EEEEEeCCcchH--HHhhc---CCCeEEEeccccCcHHHHHhhccCCCEEEE
Confidence            68999999999999999999987 66  899999876211  11111   112222211  1   124567789999999


Q ss_pred             cCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCCchHHHHHHHHHhCCC----C---CCCEEEe
Q 018512          117 PAGVPRKP--GMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTY----D---PKKLLGV  187 (354)
Q Consensus       117 ~ag~~~~~--g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~~~~~~~~~~----p---~~kviG~  187 (354)
                      +|+.....  .....+.+..|+....++++.+.+.+  ..+|++|... +........+......    |   +...+|.
T Consensus        74 ~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~v~~SS~~-v~g~~~~~~~~e~~~~~~~~~~~~~~~~Y~~  150 (345)
T 2bll_A           74 LVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYR--KRIIFPSTSE-VYGMCSDKYFDEDHSNLIVGPVNKPRWIYSV  150 (345)
T ss_dssp             CBCCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTT--CEEEEECCGG-GGBTCCCSSBCTTTCCCBCCCTTCGGGHHHH
T ss_pred             cccccCccchhcCHHHHHHHHHHHHHHHHHHHHHhC--CeEEEEecHH-HcCCCCCCCcCCcccccccCcccCcccccHH
Confidence            98864311  11334566788889999999998766  4455554311 0000000000000000    0   1113444


Q ss_pred             ccchHHHHHHHHHHHhCCCCCCCc-ceEEeecC
Q 018512          188 TMLDVVRANTFVAEVLGLDPRDVD-VPVVGGHA  219 (354)
Q Consensus       188 t~ld~~r~~~~la~~l~v~~~~v~-~~v~G~hg  219 (354)
                      +.....++-..+++..|++..-++ +.++|...
T Consensus       151 sK~~~e~~~~~~~~~~~~~~~ilrp~~v~G~~~  183 (345)
T 2bll_A          151 SKQLLDRVIWAYGEKEGLQFTLFRPFNWMGPRL  183 (345)
T ss_dssp             HHHHHHHHHHHHHHHHCCCEEEEEECSEECSSC
T ss_pred             HHHHHHHHHHHHHHhcCCCEEEEcCCcccCCCc
Confidence            444455555566666677665554 56777653

>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}

Probab=98.07  E-value=2.5e-05  Score=77.72  Aligned_cols=119  Identities=13%  Similarity=0.072  Sum_probs=79.0

Q ss_pred             CCCCCeEEEEcCCCchHHHHHHHHHhCCC-CcEEEEEecCCchh-HHHHHhcCCC--------------CCeEEEEeCC-
Q 018512           39 GAAGFKVAILGAAGGIGQPLAMLMKINPL-VSVLHLYDVVNTPG-VTADISHMDT--------------GAVVRGFLGQ-  101 (354)
Q Consensus        39 ~~~~~kI~IiGa~G~vG~~~a~~l~~~~~-~~ei~L~D~~~~~g-~~~dl~~~~~--------------~~~v~~~~~~-  101 (354)
                      ..++++|.|+||+|++|+.++..|+..+. ..+|+++++..... ....+.+...              ...+..+... 
T Consensus        70 ~~~~~~VLVTGatG~IG~~l~~~Ll~~~~~g~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl  149 (478)
T 4dqv_A           70 SPELRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAESDEDARRRLEKTFDSGDPELLRHFKELAADRLEVVAGDK  149 (478)
T ss_dssp             CSCCCEEEEECTTSHHHHHHHHHHHHHSCTTCEEEEEECSSSHHHHHHHHHGGGCSSCHHHHHHHHHHHTTTEEEEECCT
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhcCCCCCEEEEEECCCCcHHHHHHHHHHHHhcchhhhhhhhhhccCceEEEEeEC
Confidence            44578999999999999999999988722 23999999876211 1111211100              1233332221 


Q ss_pred             ---------CcHHhhhCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 018512          102 ---------PQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  159 (354)
Q Consensus       102 ---------~d~~~al~~aDvVIi~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~t  159 (354)
                               .++.++++++|+||++|+....  ....+.+..|+....++++.+.+...+.+|.+.|
T Consensus       150 ~~~~~gld~~~~~~~~~~~D~Vih~Aa~~~~--~~~~~~~~~Nv~gt~~ll~aa~~~~~~~~V~iSS  214 (478)
T 4dqv_A          150 SEPDLGLDQPMWRRLAETVDLIVDSAAMVNA--FPYHELFGPNVAGTAELIRIALTTKLKPFTYVST  214 (478)
T ss_dssp             TSGGGGCCHHHHHHHHHHCCEEEECCSSCSB--SSCCEEHHHHHHHHHHHHHHHTSSSCCCEEEEEE
T ss_pred             CCcccCCCHHHHHHHHcCCCEEEECccccCC--cCHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEee
Confidence                     1345667899999999987543  2233456889999999999999877666666665

>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*

Probab=98.06  E-value=1.7e-05  Score=74.02  Aligned_cols=102  Identities=15%  Similarity=0.176  Sum_probs=65.8

Q ss_pred             CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc--hhH---HH----HHhcCCC-C-------------CeEEE
Q 018512           41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGV---TA----DISHMDT-G-------------AVVRG   97 (354)
Q Consensus        41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~--~g~---~~----dl~~~~~-~-------------~~v~~   97 (354)
                      +.+||+|||+ |.+|+.+|..|+..|+  +|+++|+++.  ...   ..    .+..... .             ..++.
T Consensus        14 ~~~~I~VIG~-G~mG~~iA~~la~~G~--~V~~~d~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~~~~~~i~~   90 (302)
T 1f0y_A           14 IVKHVTVIGG-GLMGAGIAQVAAATGH--TVVLVDQTEDILAKSKKGIEESLRKVAKKKFAENPKAGDEFVEKTLSTIAT   90 (302)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTC--EEEEECSCHHHHHHHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHTEEE
T ss_pred             cCCEEEEECC-CHHHHHHHHHHHhCCC--eEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCccccchhhHHHHHhceEE
Confidence            3468999999 9999999999999988  9999999861  110   00    0111110 0             12333


Q ss_pred             EeCCCcHHhhhCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecCCCCC
Q 018512           98 FLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNS  164 (354)
Q Consensus        98 ~~~~~d~~~al~~aDvVIi~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~-p~a~viv~tNPv~~  164 (354)
                         ++++++++++||+||++..              .+....+++.+.+.++. |+++|  +||...+
T Consensus        91 ---~~~~~~~~~~aD~Vi~avp--------------~~~~~~~~v~~~l~~~~~~~~iv--~s~ts~i  139 (302)
T 1f0y_A           91 ---STDAASVVHSTDLVVEAIV--------------ENLKVKNELFKRLDKFAAEHTIF--ASNTSSL  139 (302)
T ss_dssp             ---ESCHHHHTTSCSEEEECCC--------------SCHHHHHHHHHHHTTTSCTTCEE--EECCSSS
T ss_pred             ---ecCHHHhhcCCCEEEEcCc--------------CcHHHHHHHHHHHHhhCCCCeEE--EECCCCC
Confidence               3467778999999999852              12334556677777776 46644  4555444

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A

Probab=98.06  E-value=5.8e-06  Score=73.91  Aligned_cols=113  Identities=19%  Similarity=0.130  Sum_probs=73.4

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEE-EeCCCcHHhhhCCCcEEEEcCCC
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRG-FLGQPQLENALTGMDLVIIPAGV  120 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~-~~~~~d~~~al~~aDvVIi~ag~  120 (354)
                      .++|.|+||+|++|++++..|+..|...+|+++|+++...........   ..+.. +....++.++++++|+||++||.
T Consensus        18 ~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~~~~~~~---~~~~~D~~d~~~~~~~~~~~d~vi~~ag~   94 (242)
T 2bka_A           18 NKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYKNV---NQEVVDFEKLDDYASAFQGHDVGFCCLGT   94 (242)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGGGGGC---EEEECCGGGGGGGGGGGSSCSEEEECCCC
T ss_pred             CCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCccccccCCc---eEEecCcCCHHHHHHHhcCCCEEEECCCc
Confidence            468999999999999999999988865589999987621000000110   00111 11123456778999999999985


Q ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 018512          121 PRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  159 (354)
Q Consensus       121 ~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~t  159 (354)
                      ... +....+++..|+.....+++.+++..... |+++|
T Consensus        95 ~~~-~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-iv~~S  131 (242)
T 2bka_A           95 TRG-KAGAEGFVRVDRDYVLKSAELAKAGGCKH-FNLLS  131 (242)
T ss_dssp             CHH-HHHHHHHHHHHTHHHHHHHHHHHHTTCCE-EEEEC
T ss_pred             ccc-cCCcccceeeeHHHHHHHHHHHHHCCCCE-EEEEc
Confidence            421 11234566778888999999988765444 44444

>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*

Probab=98.05  E-value=1.7e-05  Score=79.23  Aligned_cols=112  Identities=16%  Similarity=0.175  Sum_probs=71.4

Q ss_pred             CCCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCC--C--------------CCeEEEEeCCC
Q 018512           39 GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMD--T--------------GAVVRGFLGQP  102 (354)
Q Consensus        39 ~~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~--~--------------~~~v~~~~~~~  102 (354)
                      ....|||+|||+ |.||..+|..|+..|+  +|+++|+++.+  +..+....  .              ...++.   ++
T Consensus         5 ~~~~~~I~VIG~-G~vG~~lA~~la~~G~--~V~~~d~~~~~--v~~l~~~~~~i~e~gl~~~l~~~~~~~~l~~---tt   76 (478)
T 2y0c_A            5 HHGSMNLTIIGS-GSVGLVTGACLADIGH--DVFCLDVDQAK--IDILNNGGVPIHEPGLKEVIARNRSAGRLRF---ST   76 (478)
T ss_dssp             --CCCEEEEECC-SHHHHHHHHHHHHTTC--EEEEECSCHHH--HHHHHTTCCSSCCTTHHHHHHHHHHTTCEEE---EC
T ss_pred             cCCCceEEEECc-CHHHHHHHHHHHhCCC--EEEEEECCHHH--HHHHHCCCCCcCCCCHHHHHHHhcccCCEEE---EC
Confidence            345689999999 9999999999999998  99999997521  12222210  0              012443   35


Q ss_pred             cHHhhhCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEec-CCCCC
Q 018512          103 QLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLIS-NPVNS  164 (354)
Q Consensus       103 d~~~al~~aDvVIi~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~-p~a~viv~t-NPv~~  164 (354)
                      |+++++++||+||++...|.+....      -++..+.++++.+.++. |+.+|++.| -|.+.
T Consensus        77 d~~~a~~~aDvviiaVptp~~~~~~------~dl~~v~~v~~~i~~~l~~~~iVV~~STv~~gt  134 (478)
T 2y0c_A           77 DIEAAVAHGDVQFIAVGTPPDEDGS------ADLQYVLAAARNIGRYMTGFKVIVDKSTVPVGT  134 (478)
T ss_dssp             CHHHHHHHCSEEEECCCCCBCTTSS------BCCHHHHHHHHHHHHHCCSCEEEEECSCCCTTH
T ss_pred             CHHHHhhcCCEEEEEeCCCcccCCC------ccHHHHHHHHHHHHHhcCCCCEEEEeCCcCCCc
Confidence            7778899999999998776533211      12345555666666655 456555443 34443

>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*

Probab=98.05  E-value=2.4e-05  Score=73.70  Aligned_cols=114  Identities=14%  Similarity=0.047  Sum_probs=74.0

Q ss_pred             CCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcCC
Q 018512           40 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG  119 (354)
Q Consensus        40 ~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~ag  119 (354)
                      .+++||+|+||+|++|++++..|+..|.  +|+++|++..... ..+.+......+..+... -...++.++|+||++|+
T Consensus        25 ~~~~~vlVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~D-~~~~~~~~~d~vih~A~  100 (343)
T 2b69_A           25 KDRKRILITGGAGFVGSHLTDKLMMDGH--EVTVVDNFFTGRK-RNVEHWIGHENFELINHD-VVEPLYIEVDQIYHLAS  100 (343)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEECCSSCCG-GGTGGGTTCTTEEEEECC-TTSCCCCCCSEEEECCS
T ss_pred             cCCCEEEEEcCccHHHHHHHHHHHHCCC--EEEEEeCCCccch-hhhhhhccCCceEEEeCc-cCChhhcCCCEEEECcc
Confidence            3467999999999999999999999887  8999998641100 011111111223333221 11345789999999988


Q ss_pred             CCCCC--CCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 018512          120 VPRKP--GMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  159 (354)
Q Consensus       120 ~~~~~--g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~t  159 (354)
                      .....  .....+.+..|+....++++.+.+.+.  .++++|
T Consensus       101 ~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~--~~v~~S  140 (343)
T 2b69_A          101 PASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGA--RLLLAS  140 (343)
T ss_dssp             CCSHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTC--EEEEEE
T ss_pred             ccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCC--cEEEEC
Confidence            64311  123455678899999999999988764  444444

>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}

Probab=98.05  E-value=1.3e-05  Score=74.98  Aligned_cols=169  Identities=17%  Similarity=0.139  Sum_probs=93.0

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCe-EEE-EeCCCcHHhhhC--CCcEEEEc
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAV-VRG-FLGQPQLENALT--GMDLVIIP  117 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~-v~~-~~~~~d~~~al~--~aDvVIi~  117 (354)
                      +|||.|+||+|++|++++..|+..|.  +|+++|++..... ..+..   ... +.. +....++.++++  ++|+||++
T Consensus         1 M~~ilVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~-~~~~~---~~~~~~~D~~~~~~~~~~~~~~~~d~vih~   74 (330)
T 2c20_A            1 MNSILICGGAGYIGSHAVKKLVDEGL--SVVVVDNLQTGHE-DAITE---GAKFYNGDLRDKAFLRDVFTQENIEAVMHF   74 (330)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTC--EEEEEECCSSCCG-GGSCT---TSEEEECCTTCHHHHHHHHHHSCEEEEEEC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCC--EEEEEeCCCcCch-hhcCC---CcEEEECCCCCHHHHHHHHhhcCCCEEEEC
Confidence            47999999999999999999999887  8999998652100 11111   111 111 001122446677  89999999


Q ss_pred             CCCCCCC--CCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCCchHHHHHHHHHhCCCCCCCEEEeccchHHHH
Q 018512          118 AGVPRKP--GMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRA  195 (354)
Q Consensus       118 ag~~~~~--g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~~~~~~~~~~p~~kviG~t~ld~~r~  195 (354)
                      |+.....  .....+.+..|+....++++.+.+.+...+|.+.|.-+.....  ...+......++...+|.+.....++
T Consensus        75 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~Ss~~~~~~~~--~~~~~E~~~~~~~~~Y~~sK~~~e~~  152 (330)
T 2c20_A           75 AADSLVGVSMEKPLQYYNNNVYGALCLLEVMDEFKVDKFIFSSTAATYGEVD--VDLITEETMTNPTNTYGETKLAIEKM  152 (330)
T ss_dssp             CCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECCGGGGCSCS--SSSBCTTSCCCCSSHHHHHHHHHHHH
T ss_pred             CcccCccccccCHHHHHHHHhHHHHHHHHHHHHcCCCEEEEeCCceeeCCCC--CCCCCcCCCCCCCChHHHHHHHHHHH
Confidence            9865311  0134456788999999999999877554444433311100000  00000001111223344444444455


Q ss_pred             HHHHHHHhCCCCCCCc-ceEEeec
Q 018512          196 NTFVAEVLGLDPRDVD-VPVVGGH  218 (354)
Q Consensus       196 ~~~la~~l~v~~~~v~-~~v~G~h  218 (354)
                      -..+++..|++..-++ +.++|..
T Consensus       153 ~~~~~~~~~~~~~ilrp~~v~G~~  176 (330)
T 2c20_A          153 LHWYSQASNLRYKIFRYFNVAGAT  176 (330)
T ss_dssp             HHHHHHTSSCEEEEEECSEEECCC
T ss_pred             HHHHHHHhCCcEEEEecCcccCCC
Confidence            5555555566544443 4667754

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*

Probab=98.05  E-value=2e-05  Score=73.98  Aligned_cols=113  Identities=18%  Similarity=0.134  Sum_probs=74.1

Q ss_pred             CCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeC-CC---cHHhhhC--CCcE
Q 018512           40 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLG-QP---QLENALT--GMDL  113 (354)
Q Consensus        40 ~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~-~~---d~~~al~--~aDv  113 (354)
                      -+.|+|.|+||+|++|++++..|+..|.  +|+++|++.....  ++....  ..+..+.. -.   ++.++++  ++|+
T Consensus        18 ~~~~~vlVTGasG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~--~~~~~l--~~v~~~~~Dl~d~~~~~~~~~~~~~D~   91 (330)
T 2pzm_A           18 GSHMRILITGGAGCLGSNLIEHWLPQGH--EILVIDNFATGKR--EVLPPV--AGLSVIEGSVTDAGLLERAFDSFKPTH   91 (330)
T ss_dssp             TTCCEEEEETTTSHHHHHHHHHHGGGTC--EEEEEECCSSSCG--GGSCSC--TTEEEEECCTTCHHHHHHHHHHHCCSE
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCC--EEEEEECCCccch--hhhhcc--CCceEEEeeCCCHHHHHHHHhhcCCCE
Confidence            3457999999999999999999998887  9999998642100  011110  12222211 12   2456677  9999


Q ss_pred             EEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 018512          114 VIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  159 (354)
Q Consensus       114 VIi~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~t  159 (354)
                      ||++||..........+ +..|+.....+++.+.+.....+|.+.|
T Consensus        92 vih~A~~~~~~~~~~~~-~~~N~~~~~~l~~a~~~~~~~~iV~~SS  136 (330)
T 2pzm_A           92 VVHSAAAYKDPDDWAED-AATNVQGSINVAKAASKAGVKRLLNFQT  136 (330)
T ss_dssp             EEECCCCCSCTTCHHHH-HHHHTHHHHHHHHHHHHHTCSEEEEEEE
T ss_pred             EEECCccCCCccccChh-HHHHHHHHHHHHHHHHHcCCCEEEEecC
Confidence            99999865432122233 6789999999999998876544444443

>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}

Probab=98.04  E-value=9.6e-06  Score=81.03  Aligned_cols=101  Identities=23%  Similarity=0.332  Sum_probs=67.0

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc--hhHH----HHHhcCCCC------------CeEEEEeCCCc
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVT----ADISHMDTG------------AVVRGFLGQPQ  103 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~--~g~~----~dl~~~~~~------------~~v~~~~~~~d  103 (354)
                      .+||+|||+ |.+|..+|..|+..|+  +|+++|+++.  ....    .-+......            ..++.   +++
T Consensus         5 ~~kVgVIGa-G~MG~~IA~~la~aG~--~V~l~D~~~e~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~---~~~   78 (483)
T 3mog_A            5 VQTVAVIGS-GTMGAGIAEVAASHGH--QVLLYDISAEALTRAIDGIHARLNSRVTRGKLTAETCERTLKRLIP---VTD   78 (483)
T ss_dssp             CCCEEEECC-SHHHHHHHHHHHHTTC--CEEEECSCHHHHHHHHHHHHHHHHTTTTTTSSCHHHHHHHHHTEEE---ECC
T ss_pred             CCEEEEECc-CHHHHHHHHHHHHCCC--eEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhceeE---eCC
Confidence            459999999 9999999999999998  8999999861  1111    111211110            12343   246


Q ss_pred             HHhhhCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecCCCCCc
Q 018512          104 LENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNST  165 (354)
Q Consensus       104 ~~~al~~aDvVIi~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~-p~a~viv~tNPv~~~  165 (354)
                      + +++++||+||.+..              .+..+.+++.+.+.+++ |++++  +||...+-
T Consensus        79 ~-~~~~~aDlVIeAVp--------------e~~~vk~~v~~~l~~~~~~~~Il--asntSti~  124 (483)
T 3mog_A           79 I-HALAAADLVIEAAS--------------ERLEVKKALFAQLAEVCPPQTLL--TTNTSSIS  124 (483)
T ss_dssp             G-GGGGGCSEEEECCC--------------CCHHHHHHHHHHHHHHSCTTCEE--EECCSSSC
T ss_pred             H-HHhcCCCEEEEcCC--------------CcHHHHHHHHHHHHHhhccCcEE--EecCCCCC
Confidence            5 57999999999841              23456667777788877 56643  56665544

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}

Probab=98.03  E-value=8.1e-06  Score=75.04  Aligned_cols=103  Identities=17%  Similarity=0.107  Sum_probs=69.7

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhC-CCCcEEEEEecCCchhHHHHHhcCCCCCeEEEE--eCCCcHHhhhCCCcEEEEcCC
Q 018512           43 FKVAILGAAGGIGQPLAMLMKIN-PLVSVLHLYDVVNTPGVTADISHMDTGAVVRGF--LGQPQLENALTGMDLVIIPAG  119 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~-~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~--~~~~d~~~al~~aDvVIi~ag  119 (354)
                      |||.|+||+|++|+.++..|... +.  +|++++++....  .++...  ...+...  ....++.++++++|+||++++
T Consensus         1 M~ilVtGatG~iG~~l~~~L~~~~g~--~V~~~~R~~~~~--~~~~~~--~v~~~~~D~~d~~~l~~~~~~~d~vi~~a~   74 (289)
T 3e48_A            1 MNIMLTGATGHLGTHITNQAIANHID--HFHIGVRNVEKV--PDDWRG--KVSVRQLDYFNQESMVEAFKGMDTVVFIPS   74 (289)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHHTTCT--TEEEEESSGGGS--CGGGBT--TBEEEECCTTCHHHHHHHTTTCSEEEECCC
T ss_pred             CEEEEEcCCchHHHHHHHHHhhCCCC--cEEEEECCHHHH--HHhhhC--CCEEEEcCCCCHHHHHHHHhCCCEEEEeCC
Confidence            78999999999999999998876 66  889998875211  112211  1111111  111345678999999999987


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 018512          120 VPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  159 (354)
Q Consensus       120 ~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~t  159 (354)
                      ....        ...|+...+++++.+++.+.+.+|.+.|
T Consensus        75 ~~~~--------~~~~~~~~~~l~~aa~~~gv~~iv~~Ss  106 (289)
T 3e48_A           75 IIHP--------SFKRIPEVENLVYAAKQSGVAHIIFIGY  106 (289)
T ss_dssp             CCCS--------HHHHHHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred             CCcc--------chhhHHHHHHHHHHHHHcCCCEEEEEcc
Confidence            5421        2457888899999999877655555444

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}

Probab=98.02  E-value=2.6e-05  Score=72.47  Aligned_cols=115  Identities=9%  Similarity=-0.024  Sum_probs=69.9

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEec-CCch-hHHHHHhcCCC-CCeEEEE----eCCCcHHhhhCCCcEEE
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDV-VNTP-GVTADISHMDT-GAVVRGF----LGQPQLENALTGMDLVI  115 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~-~~~~-g~~~dl~~~~~-~~~v~~~----~~~~d~~~al~~aDvVI  115 (354)
                      +||.|+||+|++|++++..|+..|.  +|+.+++ +... .....+..... ...+..+    ....++.++++++|+||
T Consensus         2 k~vlVTGatG~iG~~l~~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi   79 (322)
T 2p4h_X            2 GRVCVTGGTGFLGSWIIKSLLENGY--SVNTTIRADPERKRDVSFLTNLPGASEKLHFFNADLSNPDSFAAAIEGCVGIF   79 (322)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTC--EEEEECCCC----CCCHHHHTSTTHHHHEEECCCCTTCGGGGHHHHTTCSEEE
T ss_pred             CEEEEECChhHHHHHHHHHHHHCCC--EEEEEEeCCccchhHHHHHHhhhccCCceEEEecCCCCHHHHHHHHcCCCEEE
Confidence            5899999999999999999999987  8888876 4310 00001111100 0112221    11234567889999999


Q ss_pred             EcCCCCCCCCCC-HHHHHHHHHHHHHHHHHHHhhh-CCCeEEEEec
Q 018512          116 IPAGVPRKPGMT-RDDLFNINAGIVRTLCEGIAKC-CPNATVNLIS  159 (354)
Q Consensus       116 i~ag~~~~~g~~-r~d~~~~n~~~~~~i~~~i~~~-~p~a~viv~t  159 (354)
                      ++|+........ ..+++..|+....++++.+.+. ....+|.+.|
T Consensus        80 h~A~~~~~~~~~~~~~~~~~nv~gt~~l~~aa~~~~~~~~iV~~SS  125 (322)
T 2p4h_X           80 HTASPIDFAVSEPEEIVTKRTVDGALGILKACVNSKTVKRFIYTSS  125 (322)
T ss_dssp             ECCCCC--------CHHHHHHHHHHHHHHHHHTTCSSCCEEEEEEE
T ss_pred             EcCCcccCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEecc
Confidence            998643111111 2346788999999999999876 3344444433

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}

Probab=98.01  E-value=3.6e-05  Score=72.40  Aligned_cols=113  Identities=18%  Similarity=0.067  Sum_probs=73.0

Q ss_pred             CCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeC-CC---cHHhhhCC--CcE
Q 018512           40 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLG-QP---QLENALTG--MDL  113 (354)
Q Consensus        40 ~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~-~~---d~~~al~~--aDv  113 (354)
                      .++|+|+|+||+|++|++++..|+..|.  +|+++|++.... ...+...   ..+..+.. -.   ++.+++++  +|+
T Consensus        19 ~~~~~vlVTGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~-~~~l~~~---~~~~~~~~Dl~d~~~~~~~~~~~~~D~   92 (333)
T 2q1w_A           19 SHMKKVFITGICGQIGSHIAELLLERGD--KVVGIDNFATGR-REHLKDH---PNLTFVEGSIADHALVNQLIGDLQPDA   92 (333)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEECCSSCC-GGGSCCC---TTEEEEECCTTCHHHHHHHHHHHCCSE
T ss_pred             CCCCEEEEeCCccHHHHHHHHHHHHCCC--EEEEEECCCccc-hhhHhhc---CCceEEEEeCCCHHHHHHHHhccCCcE
Confidence            3457999999999999999999999887  999999865210 0111111   12222211 12   24466777  999


Q ss_pred             EEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 018512          114 VIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  159 (354)
Q Consensus       114 VIi~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~t  159 (354)
                      ||++|+..........+ +..|+.....+++.+.+.....+|.+.|
T Consensus        93 vih~A~~~~~~~~~~~~-~~~N~~~~~~l~~a~~~~~~~~iV~~SS  137 (333)
T 2q1w_A           93 VVHTAASYKDPDDWYND-TLTNCVGGSNVVQAAKKNNVGRFVYFQT  137 (333)
T ss_dssp             EEECCCCCSCTTCHHHH-HHHHTHHHHHHHHHHHHTTCSEEEEEEE
T ss_pred             EEECceecCCCccCChH-HHHHHHHHHHHHHHHHHhCCCEEEEECc
Confidence            99999865332112223 6789999999999998865444444443

>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0

Probab=98.01  E-value=5e-06  Score=76.31  Aligned_cols=90  Identities=21%  Similarity=0.208  Sum_probs=68.2

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhC--CCcEEEEcCCC
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALT--GMDLVIIPAGV  120 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~--~aDvVIi~ag~  120 (354)
                      |||.|+||+|++|++++..|+..|.  +|+.+++..     .|+.+            ..++.++++  ++|+||++|+.
T Consensus         6 m~ilVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~-----~D~~d------------~~~~~~~~~~~~~d~vi~~a~~   66 (287)
T 3sc6_A            6 ERVIITGANGQLGKQLQEELNPEEY--DIYPFDKKL-----LDITN------------ISQVQQVVQEIRPHIIIHCAAY   66 (287)
T ss_dssp             EEEEEESTTSHHHHHHHHHSCTTTE--EEEEECTTT-----SCTTC------------HHHHHHHHHHHCCSEEEECCCC
T ss_pred             eEEEEECCCCHHHHHHHHHHHhCCC--EEEEecccc-----cCCCC------------HHHHHHHHHhcCCCEEEECCcc
Confidence            4899999999999999999998887  999999843     11211            123455666  79999999986


Q ss_pred             CCCCC--CCHHHHHHHHHHHHHHHHHHHhhhCC
Q 018512          121 PRKPG--MTRDDLFNINAGIVRTLCEGIAKCCP  151 (354)
Q Consensus       121 ~~~~g--~~r~d~~~~n~~~~~~i~~~i~~~~p  151 (354)
                      .....  ....+....|+....++++.+++.+.
T Consensus        67 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~   99 (287)
T 3sc6_A           67 TKVDQAEKERDLAYVINAIGARNVAVASQLVGA   99 (287)
T ss_dssp             CCHHHHTTCHHHHHHHHTHHHHHHHHHHHHHTC
T ss_pred             cChHHHhcCHHHHHHHHHHHHHHHHHHHHHcCC
Confidence            53211  34566778899999999999998875

>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}

Probab=98.01  E-value=7.8e-06  Score=76.47  Aligned_cols=120  Identities=19%  Similarity=0.217  Sum_probs=73.1

Q ss_pred             CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc-hhHHHHH-hcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcC
Q 018512           41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT-PGVTADI-SHMDTGAVVRGFLGQPQLENALTGMDLVIIPA  118 (354)
Q Consensus        41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~-~g~~~dl-~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~a  118 (354)
                      --+||+|||+ |.+|+.+|..|+ .|+  +|+++|+++. .....+. .+.. ...++..   ++++ ++++||+||.+.
T Consensus        11 ~~~~V~vIG~-G~MG~~iA~~la-aG~--~V~v~d~~~~~~~~~~~~l~~~~-~~~i~~~---~~~~-~~~~aDlVieav   81 (293)
T 1zej_A           11 HHMKVFVIGA-GLMGRGIAIAIA-SKH--EVVLQDVSEKALEAAREQIPEEL-LSKIEFT---TTLE-KVKDCDIVMEAV   81 (293)
T ss_dssp             -CCEEEEECC-SHHHHHHHHHHH-TTS--EEEEECSCHHHHHHHHHHSCGGG-GGGEEEE---SSCT-TGGGCSEEEECC
T ss_pred             CCCeEEEEee-CHHHHHHHHHHH-cCC--EEEEEECCHHHHHHHHHHHHHHH-hCCeEEe---CCHH-HHcCCCEEEEcC
Confidence            3469999999 999999999999 888  9999999862 1111211 1110 1124432   3554 489999999984


Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCCchHHHHHHHHHhCCCCCCCEEEeccch
Q 018512          119 GVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLD  191 (354)
Q Consensus       119 g~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~~~~~~~~~~p~~kviG~t~ld  191 (354)
                                    ..+..+.+.+...+... |++++  +||...+-...    +...... +.|++|+-.++
T Consensus        82 --------------pe~~~vk~~l~~~l~~~-~~~Il--asntSti~~~~----~a~~~~~-~~r~~G~Hf~~  132 (293)
T 1zej_A           82 --------------FEDLNTKVEVLREVERL-TNAPL--CSNTSVISVDD----IAERLDS-PSRFLGVHWMN  132 (293)
T ss_dssp             --------------CSCHHHHHHHHHHHHTT-CCSCE--EECCSSSCHHH----HHTTSSC-GGGEEEEEECS
T ss_pred             --------------cCCHHHHHHHHHHHhcC-CCCEE--EEECCCcCHHH----HHHHhhc-ccceEeEEecC
Confidence                          22344555666667777 88854  45554433221    1222222 34777775443

>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2

Probab=98.00  E-value=3.9e-05  Score=72.87  Aligned_cols=116  Identities=16%  Similarity=0.023  Sum_probs=70.5

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCch---hHHHHHhcCC--CCCeEEEEeC----CCcHHhhhCC--
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP---GVTADISHMD--TGAVVRGFLG----QPQLENALTG--  110 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~---g~~~dl~~~~--~~~~v~~~~~----~~d~~~al~~--  110 (354)
                      +++|.|+||+|++|++++..|+..|.  +|+++|++...   ....++....  ....+..+..    ..++.+++++  
T Consensus         1 m~~vlVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~   78 (372)
T 1db3_A            1 SKVALITGVTGQDGSYLAEFLLEKGY--EVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREVQ   78 (372)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTC--EEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHHC
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCC--EEEEEECCCcccchHHHHHHhhccccCCCceEEEECCCCCHHHHHHHHHhcC
Confidence            36899999999999999999999887  99999986521   1111111100  0122332211    1123455654  


Q ss_pred             CcEEEEcCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHhhhCCC--eEEEEec
Q 018512          111 MDLVIIPAGVPRKP--GMTRDDLFNINAGIVRTLCEGIAKCCPN--ATVNLIS  159 (354)
Q Consensus       111 aDvVIi~ag~~~~~--g~~r~d~~~~n~~~~~~i~~~i~~~~p~--a~viv~t  159 (354)
                      .|+||++|+.....  .......+..|+.....+++.+.+...+  ..+|++|
T Consensus        79 ~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~iv~~S  131 (372)
T 1db3_A           79 PDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQAS  131 (372)
T ss_dssp             CSEEEECCCCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEE
T ss_pred             CCEEEECCcccCccccccCHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEeC
Confidence            69999999865321  1234456678999999999999887652  4555554

>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A

Probab=98.00  E-value=2.3e-06  Score=81.89  Aligned_cols=93  Identities=19%  Similarity=0.216  Sum_probs=68.2

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcCCCCC
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVPR  122 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~ag~~~  122 (354)
                      |||.|+||+|++|++++..|+..|.. +|+.+|++                     ....++.++++++|+||++|+...
T Consensus         1 M~VlVtGatG~iG~~l~~~L~~~g~~-~v~~~d~~---------------------~d~~~l~~~~~~~d~Vih~a~~~~   58 (369)
T 3st7_A            1 MNIVITGAKGFVGKNLKADLTSTTDH-HIFEVHRQ---------------------TKEEELESALLKADFIVHLAGVNR   58 (369)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHCCC-EEEECCTT---------------------CCHHHHHHHHHHCSEEEECCCSBC
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCC-EEEEECCC---------------------CCHHHHHHHhccCCEEEECCcCCC
Confidence            79999999999999999999888753 78888874                     011245677889999999998653


Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 018512          123 KPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  159 (354)
Q Consensus       123 ~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~t  159 (354)
                      ..  ...++...|+...+++++.+++.+....++.+|
T Consensus        59 ~~--~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~S   93 (369)
T 3st7_A           59 PE--HDKEFSLGNVSYLDHVLDILTRNTKKPAILLSS   93 (369)
T ss_dssp             TT--CSTTCSSSCCBHHHHHHHHHTTCSSCCEEEEEE
T ss_pred             CC--CHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeC
Confidence            21  222334568888899999998877664444443

>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}

Probab=98.00  E-value=1.4e-05  Score=83.61  Aligned_cols=102  Identities=23%  Similarity=0.359  Sum_probs=68.3

Q ss_pred             CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc---hhH--HHH-HhcC---C---------CCCeEEEEeCCC
Q 018512           41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT---PGV--TAD-ISHM---D---------TGAVVRGFLGQP  102 (354)
Q Consensus        41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~---~g~--~~d-l~~~---~---------~~~~v~~~~~~~  102 (354)
                      +.+||+|||+ |.+|+.+|..++..|+  +|+++|+++.   .+.  ..+ +...   .         ....++.   ++
T Consensus       311 ~~~kV~VIGa-G~MG~~iA~~la~aG~--~V~l~D~~~~~~~~~~~~i~~~l~~~~~~G~~~~~~~~~~~~~i~~---~~  384 (725)
T 2wtb_A          311 KIKKVAIIGG-GLMGSGIATALILSNY--PVILKEVNEKFLEAGIGRVKANLQSRVRKGSMSQEKFEKTMSLLKG---SL  384 (725)
T ss_dssp             CCCCEEEECC-SHHHHHHHHHHHTTTC--CEEEECSSHHHHHHHHHHHHHHHHHTTC----CTTHHHHTTTSEEE---ES
T ss_pred             cCcEEEEEcC-CHhhHHHHHHHHhCCC--EEEEEECCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHhcceEE---eC
Confidence            3468999999 9999999999999998  8999999861   111  011 1111   0         0123443   24


Q ss_pred             cHHhhhCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCC-CeEEEEecCCCCCc
Q 018512          103 QLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCP-NATVNLISNPVNST  165 (354)
Q Consensus       103 d~~~al~~aDvVIi~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p-~a~viv~tNPv~~~  165 (354)
                      |+ +++++||+||.+.              ..+..+.+++...+.++++ ++  |++||...+-
T Consensus       385 d~-~~~~~aDlVIeaV--------------pe~~~vk~~v~~~l~~~~~~~~--IlasntStl~  431 (725)
T 2wtb_A          385 DY-ESFRDVDMVIEAV--------------IENISLKQQIFADLEKYCPQHC--ILASNTSTID  431 (725)
T ss_dssp             SS-GGGTTCSEEEECC--------------CSCHHHHHHHHHHHHHHSCTTC--EEEECCSSSC
T ss_pred             CH-HHHCCCCEEEEcC--------------cCCHHHHHHHHHHHHhhCCCCc--EEEeCCCCCC
Confidence            65 6899999999984              2234556677777888774 66  3467776554

>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=98.00  E-value=2.4e-05  Score=68.29  Aligned_cols=106  Identities=11%  Similarity=0.081  Sum_probs=71.9

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCC----CcHHhhhCCCcEEEEc
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQ----PQLENALTGMDLVIIP  117 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~----~d~~~al~~aDvVIi~  117 (354)
                      .|||.|+||+|++|+.++..|+..+...+|+++++++..      .+    ..+..+...    .++.+++  +|+||++
T Consensus         5 ~~~vlVtGatG~iG~~l~~~l~~~g~~~~V~~~~r~~~~------~~----~~~~~~~~D~~~~~~~~~~~--~d~vi~~   72 (215)
T 2a35_A            5 PKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA------EH----PRLDNPVGPLAELLPQLDGS--IDTAFCC   72 (215)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC------CC----TTEECCBSCHHHHGGGCCSC--CSEEEEC
T ss_pred             CceEEEECCCcHHHHHHHHHHHhCCCCCeEEEEeCCCcc------cC----CCceEEeccccCHHHHHHhh--hcEEEEC
Confidence            469999999999999999999998865589999987632      01    112221111    1222333  8999999


Q ss_pred             CCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 018512          118 AGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  159 (354)
Q Consensus       118 ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~t  159 (354)
                      +|..........++...|+....++++.+.+.....+|.+.|
T Consensus        73 a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss  114 (215)
T 2a35_A           73 LGTTIKEAGSEEAFRAVDFDLPLAVGKRALEMGARHYLVVSA  114 (215)
T ss_dssp             CCCCHHHHSSHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECC
T ss_pred             eeeccccCCCHHHHHHhhHHHHHHHHHHHHHcCCCEEEEECC
Confidence            986532223456677889999999999998876554443333

>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}

Probab=98.00  E-value=7.6e-06  Score=76.21  Aligned_cols=169  Identities=12%  Similarity=0.098  Sum_probs=95.4

Q ss_pred             CCCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeC----CCcHHhhhCC--Cc
Q 018512           39 GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLG----QPQLENALTG--MD  112 (354)
Q Consensus        39 ~~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~----~~d~~~al~~--aD  112 (354)
                      ..+.++|.|+||+|++|++++..|+..|.  +|+++|++.....   +       .+..+..    ..++.+++++  .|
T Consensus         9 ~~~~~~vlVTGatG~iG~~l~~~L~~~G~--~V~~~~r~~~~~~---l-------~~~~~~~Dl~d~~~~~~~~~~~~~d   76 (321)
T 2pk3_A            9 HHGSMRALITGVAGFVGKYLANHLTEQNV--EVFGTSRNNEAKL---P-------NVEMISLDIMDSQRVKKVISDIKPD   76 (321)
T ss_dssp             ----CEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESCTTCCC---T-------TEEEEECCTTCHHHHHHHHHHHCCS
T ss_pred             ccCcceEEEECCCChHHHHHHHHHHHCCC--EEEEEecCCcccc---c-------eeeEEECCCCCHHHHHHHHHhcCCC
Confidence            45567999999999999999999999887  9999998752110   1       1222111    1234456665  89


Q ss_pred             EEEEcCCCCCC--CCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCC-CCCchHHHHHHHHHhCCCCCCCEEEecc
Q 018512          113 LVIIPAGVPRK--PGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNP-VNSTVPIAAEVFKKAGTYDPKKLLGVTM  189 (354)
Q Consensus       113 vVIi~ag~~~~--~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNP-v~~~~~~~~~~~~~~~~~p~~kviG~t~  189 (354)
                      +||++|+....  ......+.+..|+.....+++.+++......+|++|.. +.....--...+......++...+|.+.
T Consensus        77 ~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~v~g~~~~~~~~~~E~~~~~~~~~Y~~sK  156 (321)
T 2pk3_A           77 YIFHLAAKSSVKDSWLNKKGTFSTNVFGTLHVLDAVRDSNLDCRILTIGSSEEYGMILPEESPVSEENQLRPMSPYGVSK  156 (321)
T ss_dssp             EEEECCSCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEEGGGTBSCCGGGCSBCTTSCCBCCSHHHHHH
T ss_pred             EEEEcCcccchhhhhhcHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEccHHhcCCCCCCCCCCCCCCCCCCCCccHHHH
Confidence            99999986431  11234567788999999999999776433444544421 1100000000000111122333444444


Q ss_pred             chHHHHHHHHHHHhCCCCCCCc-ceEEeecC
Q 018512          190 LDVVRANTFVAEVLGLDPRDVD-VPVVGGHA  219 (354)
Q Consensus       190 ld~~r~~~~la~~l~v~~~~v~-~~v~G~hg  219 (354)
                      ....++-..+++..|++..-++ +.++|...
T Consensus       157 ~~~E~~~~~~~~~~gi~~~ilrp~~v~g~~~  187 (321)
T 2pk3_A          157 ASVGMLARQYVKAYGMDIIHTRTFNHIGPGQ  187 (321)
T ss_dssp             HHHHHHHHHHHHHHCCEEEEEEECEEECTTC
T ss_pred             HHHHHHHHHHHHHcCCCEEEEEeCcccCcCC
Confidence            4455555566666676654444 36677543

>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*

Probab=97.99  E-value=1.1e-05  Score=75.10  Aligned_cols=99  Identities=14%  Similarity=0.095  Sum_probs=70.5

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhC--CCcEEEEcCC
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALT--GMDLVIIPAG  119 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~--~aDvVIi~ag  119 (354)
                      .|||.|+||+|++|++++..|+..|.  +|++++.+..    .|+.+            ..++.++++  ++|+||++|+
T Consensus         3 ~~~ilVtGatG~iG~~l~~~L~~~g~--~v~~~~r~~~----~D~~d------------~~~~~~~~~~~~~d~vih~a~   64 (321)
T 1e6u_A            3 KQRVFIAGHRGMVGSAIRRQLEQRGD--VELVLRTRDE----LNLLD------------SRAVHDFFASERIDQVYLAAA   64 (321)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHTTCTT--EEEECCCTTT----CCTTC------------HHHHHHHHHHHCCSEEEECCC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCC--eEEEEecCcc----CCccC------------HHHHHHHHHhcCCCEEEEcCe
Confidence            47999999999999999999998887  7888876421    11111            123456677  9999999998


Q ss_pred             CCCCC---CCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEe
Q 018512          120 VPRKP---GMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLI  158 (354)
Q Consensus       120 ~~~~~---g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~  158 (354)
                      .....   .....+.+..|+....++++.+.+.....+|.+.
T Consensus        65 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~S  106 (321)
T 1e6u_A           65 KVGGIVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLFLG  106 (321)
T ss_dssp             CCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEC
T ss_pred             ecCCcchhhhCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEc
Confidence            65311   1234556788999999999999887654444333

>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*

Probab=97.99  E-value=8.2e-06  Score=75.82  Aligned_cols=163  Identities=16%  Similarity=0.089  Sum_probs=94.3

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEE-EeCCCcHHhhhC--CCcEEEEcCC
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRG-FLGQPQLENALT--GMDLVIIPAG  119 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~-~~~~~d~~~al~--~aDvVIi~ag  119 (354)
                      |||.|+||+|++|++++..|+..|.  +|+++|+..... ...+.. .. ..+.. +....++.++++  ++|+||++|+
T Consensus         1 m~vlVTGatG~iG~~l~~~L~~~G~--~V~~~~r~~~~~-~~~~~~-~~-~~~~~Dl~~~~~~~~~~~~~~~d~vi~~a~   75 (311)
T 2p5y_A            1 MRVLVTGGAGFIGSHIVEDLLARGL--EVAVLDNLATGK-RENVPK-GV-PFFRVDLRDKEGVERAFREFRPTHVSHQAA   75 (311)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTTTC--EEEEECCCSSCC-GGGSCT-TC-CEECCCTTCHHHHHHHHHHHCCSEEEECCS
T ss_pred             CEEEEEeCCcHHHHHHHHHHHHCCC--EEEEEECCCcCc-hhhccc-Ce-EEEECCCCCHHHHHHHHHhcCCCEEEECcc
Confidence            6899999999999999999999887  899999753110 001110 00 01111 001123445666  8999999987


Q ss_pred             CCCCC--CCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecC-------CCC-CchHHHHHHHHHhCCCCCCCEEEecc
Q 018512          120 VPRKP--GMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISN-------PVN-STVPIAAEVFKKAGTYDPKKLLGVTM  189 (354)
Q Consensus       120 ~~~~~--g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tN-------Pv~-~~~~~~~~~~~~~~~~p~~kviG~t~  189 (354)
                      .....  .......+..|+....++++.+.+.....+|.+.|-       +.+ ..        ......++...+|.+.
T Consensus        76 ~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iv~~SS~~~~~g~~~~~~~~--------~E~~~~~~~~~Y~~sK  147 (311)
T 2p5y_A           76 QASVKVSVEDPVLDFEVNLLGGLNLLEACRQYGVEKLVFASTGGAIYGEVPEGERA--------EETWPPRPKSPYAASK  147 (311)
T ss_dssp             CCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEHHHHHCCCCTTCCB--------CTTSCCCCCSHHHHHH
T ss_pred             ccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCCChhhcCCCCCCCCc--------CCCCCCCCCChHHHHH
Confidence            54211  012345677899999999999987765544444332       100 00        0000111233445555


Q ss_pred             chHHHHHHHHHHHhCCCCCCCc-ceEEeec
Q 018512          190 LDVVRANTFVAEVLGLDPRDVD-VPVVGGH  218 (354)
Q Consensus       190 ld~~r~~~~la~~l~v~~~~v~-~~v~G~h  218 (354)
                      ....++-..+++..|++..-++ +.++|..
T Consensus       148 ~~~e~~~~~~~~~~~~~~~~lrp~~v~Gp~  177 (311)
T 2p5y_A          148 AAFEHYLSVYGQSYGLKWVSLRYGNVYGPR  177 (311)
T ss_dssp             HHHHHHHHHHHHHHCCCEEEEEECEEECTT
T ss_pred             HHHHHHHHHHHHHcCCCEEEEeeccccCcC
Confidence            5555566666667777655554 4677753

>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*

Probab=97.99  E-value=1.8e-05  Score=74.49  Aligned_cols=114  Identities=19%  Similarity=0.098  Sum_probs=73.3

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc--------hhHHHHHhcCCCCCeEEEEe-CCC---cHHhhhC-
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--------PGVTADISHMDTGAVVRGFL-GQP---QLENALT-  109 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~--------~g~~~dl~~~~~~~~v~~~~-~~~---d~~~al~-  109 (354)
                      |+|.|+||+|++|++++..|+..|.  +|+++|+...        .....++.... ...+..+. +-.   ++.++++ 
T Consensus         3 ~~vlVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~D~~~~~~~~~~~~~   79 (348)
T 1ek6_A            3 EKVLVTGGAGYIGSHTVLELLEAGY--LPVVIDNFHNAFRGGGSLPESLRRVQELT-GRSVEFEEMDILDQGALQRLFKK   79 (348)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHTTC--CEEEEECSSSSCBCSSSSBHHHHHHHHHH-TCCCEEEECCTTCHHHHHHHHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCC--EEEEEecCCcccccccccHHHHHHHHhcc-CCceEEEECCCCCHHHHHHHHHh
Confidence            6899999999999999999999887  8999987531        11222222110 01122111 112   2445666 


Q ss_pred             -CCcEEEEcCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 018512          110 -GMDLVIIPAGVPRKP--GMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  159 (354)
Q Consensus       110 -~aDvVIi~ag~~~~~--g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~t  159 (354)
                       ++|+||++|+.....  .....+.+..|+.....+++.+++.....+|.+.|
T Consensus        80 ~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS  132 (348)
T 1ek6_A           80 YSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHGVKNLVFSSS  132 (348)
T ss_dssp             CCEEEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred             cCCCEEEECCCCcCccchhhchHHHHHHHHHHHHHHHHHHHHhCCCEEEEECc
Confidence             899999999854211  01334567889999999999998776555444444

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*

Probab=97.99  E-value=1.9e-05  Score=70.50  Aligned_cols=115  Identities=17%  Similarity=0.089  Sum_probs=73.5

Q ss_pred             CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEE-EeCCCcHHhhhCCCcEEEEcCC
Q 018512           41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRG-FLGQPQLENALTGMDLVIIPAG  119 (354)
Q Consensus        41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~-~~~~~d~~~al~~aDvVIi~ag  119 (354)
                      .+++|.|+||+|++|++++..|+..+...+|+++++++..  ..++.. . ...+.. +....++.++++++|+||+++|
T Consensus         3 ~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~--~~~~~~-~-~~~~~~D~~d~~~~~~~~~~~d~vi~~a~   78 (253)
T 1xq6_A            3 NLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQG--KEKIGG-E-ADVFIGDITDADSINPAFQGIDALVILTS   78 (253)
T ss_dssp             SCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHH--HHHTTC-C-TTEEECCTTSHHHHHHHHTTCSEEEECCC
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCc--hhhcCC-C-eeEEEecCCCHHHHHHHHcCCCEEEEecc
Confidence            4579999999999999999999998322399999986421  122211 1 011111 1111245678899999999988


Q ss_pred             CCCC------------CCC---CHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 018512          120 VPRK------------PGM---TRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  159 (354)
Q Consensus       120 ~~~~------------~g~---~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~t  159 (354)
                      ....            +..   ...+....|+.....+++.+++.....+|.+.|
T Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS  133 (253)
T 1xq6_A           79 AVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAGVKHIVVVGS  133 (253)
T ss_dssp             CCCEECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHTCSEEEEEEE
T ss_pred             ccccccccccccccccchhhccccccceeeeHHHHHHHHHHHHHcCCCEEEEEcC
Confidence            5421            110   011346788889999999998876554444444

>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A

Probab=97.97  E-value=1.6e-05  Score=73.97  Aligned_cols=104  Identities=13%  Similarity=0.078  Sum_probs=58.0

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCC--CcEEEEcCC
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTG--MDLVIIPAG  119 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~--aDvVIi~ag  119 (354)
                      .|||.|+||+|++|++++..|+..|.  +|+++|++....   .    ....++.   ...++.+++++  +|+||++|+
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~---~----~~~~Dl~---d~~~~~~~~~~~~~d~vih~A~   69 (315)
T 2ydy_A            2 NRRVLVTGATGLLGRAVHKEFQQNNW--HAVGCGFRRARP---K----FEQVNLL---DSNAVHHIIHDFQPHVIVHCAA   69 (315)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHTTTC--EEEEEC----------------------------CHHHHHHHCCSEEEECC-
T ss_pred             CCeEEEECCCcHHHHHHHHHHHhCCC--eEEEEccCCCCC---C----eEEecCC---CHHHHHHHHHhhCCCEEEECCc
Confidence            36899999999999999999999887  999999754220   0    0011111   11234566664  899999998


Q ss_pred             CCCCC--CCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 018512          120 VPRKP--GMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  159 (354)
Q Consensus       120 ~~~~~--g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~t  159 (354)
                      .....  .....+.+..|+.....+++.+.+.+.  .+|++|
T Consensus        70 ~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~--~~v~~S  109 (315)
T 2ydy_A           70 ERRPDVVENQPDAASQLNVDASGNLAKEAAAVGA--FLIYIS  109 (315)
T ss_dssp             ------------------CHHHHHHHHHHHHHTC--EEEEEE
T ss_pred             ccChhhhhcCHHHHHHHHHHHHHHHHHHHHHcCC--eEEEEc
Confidence            64321  123345667899999999999988754  455444

>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}

Probab=97.97  E-value=2.5e-05  Score=69.64  Aligned_cols=92  Identities=21%  Similarity=0.223  Sum_probs=62.4

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEE-EecCCc--hhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcC
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHL-YDVVNT--PGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA  118 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L-~D~~~~--~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~a  118 (354)
                      +|||+|||+ |.+|..++..|...++  +|.+ +|+++.  +....++.     ....    .++ .++++++|+||++.
T Consensus        23 mmkI~IIG~-G~mG~~la~~l~~~g~--~V~~v~~r~~~~~~~l~~~~g-----~~~~----~~~-~~~~~~aDvVilav   89 (220)
T 4huj_A           23 MTTYAIIGA-GAIGSALAERFTAAQI--PAIIANSRGPASLSSVTDRFG-----ASVK----AVE-LKDALQADVVILAV   89 (220)
T ss_dssp             SCCEEEEEC-HHHHHHHHHHHHHTTC--CEEEECTTCGGGGHHHHHHHT-----TTEE----ECC-HHHHTTSSEEEEES
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCC--EEEEEECCCHHHHHHHHHHhC-----CCcc----cCh-HHHHhcCCEEEEeC
Confidence            579999998 9999999999999887  7888 998762  22222221     1111    123 46689999999985


Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCC
Q 018512          119 GVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVN  163 (354)
Q Consensus       119 g~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv~  163 (354)
                      ..                ..+.++++.+.. .++.+|+-++||..
T Consensus        90 p~----------------~~~~~v~~~l~~-~~~~ivi~~~~g~~  117 (220)
T 4huj_A           90 PY----------------DSIADIVTQVSD-WGGQIVVDASNAID  117 (220)
T ss_dssp             CG----------------GGHHHHHTTCSC-CTTCEEEECCCCBC
T ss_pred             Ch----------------HHHHHHHHHhhc-cCCCEEEEcCCCCC
Confidence            21                133455555554 45667888899885

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*

Probab=97.97  E-value=2.8e-05  Score=74.45  Aligned_cols=171  Identities=13%  Similarity=0.009  Sum_probs=99.3

Q ss_pred             CCCeEEEEcCCCchHHHHHHHHHhCC-CCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCC----CcHHhhhCCCcEEE
Q 018512           41 AGFKVAILGAAGGIGQPLAMLMKINP-LVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQ----PQLENALTGMDLVI  115 (354)
Q Consensus        41 ~~~kI~IiGa~G~vG~~~a~~l~~~~-~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~----~d~~~al~~aDvVI  115 (354)
                      ++|||+|+||+|++|++++..|+..| .  +|+++|++..... ..+..   ...+..+...    .++.++++++|+||
T Consensus        31 ~~~~ilVtGatG~iG~~l~~~L~~~g~~--~V~~~~r~~~~~~-~~l~~---~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi  104 (377)
T 2q1s_A           31 ANTNVMVVGGAGFVGSNLVKRLLELGVN--QVHVVDNLLSAEK-INVPD---HPAVRFSETSITDDALLASLQDEYDYVF  104 (377)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCS--EEEEECCCTTCCG-GGSCC---CTTEEEECSCTTCHHHHHHCCSCCSEEE
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHcCCc--eEEEEECCCCCch-hhccC---CCceEEEECCCCCHHHHHHHhhCCCEEE
Confidence            45799999999999999999999988 6  9999998652100 11110   1223332111    23456788999999


Q ss_pred             EcCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHhhh-CCCeEEEEecCCCCCchHHHHHHHH--HhC---CC-CCCCEEE
Q 018512          116 IPAGVPRKP--GMTRDDLFNINAGIVRTLCEGIAKC-CPNATVNLISNPVNSTVPIAAEVFK--KAG---TY-DPKKLLG  186 (354)
Q Consensus       116 i~ag~~~~~--g~~r~d~~~~n~~~~~~i~~~i~~~-~p~a~viv~tNPv~~~~~~~~~~~~--~~~---~~-p~~kviG  186 (354)
                      ++|+.....  .....+.+..|+....++++.+++. ....+|.+.|.-+.-...  ...+.  ...   .. ++...+|
T Consensus       105 h~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~V~~SS~~vyg~~~--~~~~~~~E~~~~~~~~~~~~~Y~  182 (377)
T 2q1s_A          105 HLATYHGNQSSIHDPLADHENNTLTTLKLYERLKHFKRLKKVVYSAAGCSIAEKT--FDDAKATEETDIVSLHNNDSPYS  182 (377)
T ss_dssp             ECCCCSCHHHHHHCHHHHHHHHTHHHHHHHHHHTTCSSCCEEEEEEEC----------------CCCCCCCSSCCCSHHH
T ss_pred             ECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeCCHHHcCCCC--CCCcCcccccccccccCCCCchH
Confidence            998864211  0134556788999999999999876 444444444422111000  00001  110   11 2233444


Q ss_pred             eccchHHHHHHHHHHHhCCCCCCCc-ceEEeecC
Q 018512          187 VTMLDVVRANTFVAEVLGLDPRDVD-VPVVGGHA  219 (354)
Q Consensus       187 ~t~ld~~r~~~~la~~l~v~~~~v~-~~v~G~hg  219 (354)
                      .+.....++-..+++..|++..-++ +.++|...
T Consensus       183 ~sK~~~E~~~~~~~~~~gi~~~ilRp~~v~G~~~  216 (377)
T 2q1s_A          183 MSKIFGEFYSVYYHKQHQLPTVRARFQNVYGPGE  216 (377)
T ss_dssp             HHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTC
T ss_pred             HHHHHHHHHHHHHHHHhCCCEEEEeeccEECCCC
Confidence            4555555665666666787665554 56788654

>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*

Probab=97.96  E-value=2.3e-05  Score=73.59  Aligned_cols=115  Identities=17%  Similarity=0.175  Sum_probs=71.7

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcC-CCCCe-EEE-EeCCCcHHhhhC--CCcEEE
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHM-DTGAV-VRG-FLGQPQLENALT--GMDLVI  115 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~-~~~~~-v~~-~~~~~d~~~al~--~aDvVI  115 (354)
                      |||.|+||+|++|++++..|+..|.  +|+++|+..  ......++... ..... +.. +....++.++++  ++|+||
T Consensus         1 m~vlVTGatG~iG~~l~~~L~~~G~--~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~D~vi   78 (338)
T 1udb_A            1 MRVLVTGGSGYIGSHTCVQLLQNGH--DVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEILHDHAIDTVI   78 (338)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC--EEEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTCHHHHHHHHHHTTCSEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCC--EEEEEecCCCcchhHHHHHHhhcCCcceEEEccCCCHHHHHHHhhccCCCEEE
Confidence            6899999999999999999999887  899998643  11111222211 10111 111 101112344554  599999


Q ss_pred             EcCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 018512          116 IPAGVPRKP--GMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  159 (354)
Q Consensus       116 i~ag~~~~~--g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~t  159 (354)
                      ++||.....  .....+.+..|+.....+++.+++.....+|.+.|
T Consensus        79 h~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS  124 (338)
T 1udb_A           79 HFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFIFSSS  124 (338)
T ss_dssp             ECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEE
T ss_pred             ECCccCccccchhcHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEcc
Confidence            999854211  01234567889999999999998876555544444

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2

Probab=97.95  E-value=0.0001  Score=67.57  Aligned_cols=117  Identities=18%  Similarity=0.233  Sum_probs=73.1

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCCCCeEEEEe-CCCc---HHhhh-------
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQ---LENAL-------  108 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~~~~v~~~~-~~~d---~~~al-------  108 (354)
                      .++|.|+||+|.+|..++..|+..|.  +|+++|++.  ......++........+..+. +-+|   +++++       
T Consensus        32 ~k~vlVTGasggIG~~la~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  109 (279)
T 1xg5_A           32 DRLALVTGASGGIGAAVARALVQQGL--KVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQH  109 (279)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCC--EEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHHhC
Confidence            45899999999999999999999987  899999875  222223333322112333321 1122   22233       


Q ss_pred             CCCcEEEEcCCCCCCCC---CC---HHHHHHHHHHH----HHHHHHHHhhhCC-CeEEEEecC
Q 018512          109 TGMDLVIIPAGVPRKPG---MT---RDDLFNINAGI----VRTLCEGIAKCCP-NATVNLISN  160 (354)
Q Consensus       109 ~~aDvVIi~ag~~~~~g---~~---r~d~~~~n~~~----~~~i~~~i~~~~p-~a~viv~tN  160 (354)
                      .+.|+||++||......   .+   ....+..|+..    .+.+.+.+++... .+.|+++|.
T Consensus       110 g~iD~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~~g~iv~isS  172 (279)
T 1xg5_A          110 SGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININS  172 (279)
T ss_dssp             CCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECC
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCceEEEEcC
Confidence            37999999998653211   12   23345667666    7778888877653 466666653

>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}

Probab=97.94  E-value=6.5e-06  Score=74.93  Aligned_cols=104  Identities=19%  Similarity=0.174  Sum_probs=73.3

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEe----CCCcHHhhhCCCcEEEEcC
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFL----GQPQLENALTGMDLVIIPA  118 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~----~~~d~~~al~~aDvVIi~a  118 (354)
                      +||.|+||+|++|++++..|+..|.  +|+++|++....    +.     ..+..+.    ...++.++++++|+||++|
T Consensus         3 ~~ilVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~----~~-----~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~a   71 (267)
T 3ay3_A            3 NRLLVTGAAGGVGSAIRPHLGTLAH--EVRLSDIVDLGA----AE-----AHEEIVACDLADAQAVHDLVKDCDGIIHLG   71 (267)
T ss_dssp             EEEEEESTTSHHHHHHGGGGGGTEE--EEEECCSSCCCC----CC-----TTEEECCCCTTCHHHHHHHHTTCSEEEECC
T ss_pred             ceEEEECCCCHHHHHHHHHHHhCCC--EEEEEeCCCccc----cC-----CCccEEEccCCCHHHHHHHHcCCCEEEECC
Confidence            4899999999999999999998886  899999876210    00     1112111    1123467789999999999


Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 018512          119 GVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  159 (354)
Q Consensus       119 g~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~t  159 (354)
                      +...  .....+.+..|+.....+++.+.+.....+|.+.|
T Consensus        72 ~~~~--~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS  110 (267)
T 3ay3_A           72 GVSV--ERPWNDILQANIIGAYNLYEAARNLGKPRIVFASS  110 (267)
T ss_dssp             SCCS--CCCHHHHHHHTHHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred             cCCC--CCCHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCC
Confidence            8652  23445677889999999999998765444444444

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A

Probab=97.93  E-value=1.5e-05  Score=73.63  Aligned_cols=107  Identities=15%  Similarity=0.064  Sum_probs=70.0

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCC-CCcEEEEEecCCchhHHHHHhcCCCCCeE-EE-EeCCCcHHhhhCCCcEEEEcC
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINP-LVSVLHLYDVVNTPGVTADISHMDTGAVV-RG-FLGQPQLENALTGMDLVIIPA  118 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~-~~~ei~L~D~~~~~g~~~dl~~~~~~~~v-~~-~~~~~d~~~al~~aDvVIi~a  118 (354)
                      +++|.|+||+|++|++++..|+..+ .  +|+++++++.......+....  ..+ .. +....++.++++++|+||+++
T Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~--~V~~~~R~~~~~~~~~l~~~~--~~~~~~D~~d~~~l~~~~~~~d~vi~~a   80 (299)
T 2wm3_A            5 KKLVVVFGGTGAQGGSVARTLLEDGTF--KVRVVTRNPRKKAAKELRLQG--AEVVQGDQDDQVIMELALNGAYATFIVT   80 (299)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCSS--EEEEEESCTTSHHHHHHHHTT--CEEEECCTTCHHHHHHHHTTCSEEEECC
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCc--eEEEEEcCCCCHHHHHHHHCC--CEEEEecCCCHHHHHHHHhcCCEEEEeC
Confidence            3689999999999999999998877 6  899999876322222333221  111 11 111124567899999999998


Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 018512          119 GVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  159 (354)
Q Consensus       119 g~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~t  159 (354)
                      +.....      ....|+...+++++.+++.+... ++..|
T Consensus        81 ~~~~~~------~~~~~~~~~~~~~~aa~~~gv~~-iv~~S  114 (299)
T 2wm3_A           81 NYWESC------SQEQEVKQGKLLADLARRLGLHY-VVYSG  114 (299)
T ss_dssp             CHHHHT------CHHHHHHHHHHHHHHHHHHTCSE-EEECC
T ss_pred             CCCccc------cchHHHHHHHHHHHHHHHcCCCE-EEEEc
Confidence            642111      13457778888999988876544 33343

>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*

Probab=97.93  E-value=1.2e-05  Score=77.45  Aligned_cols=118  Identities=14%  Similarity=0.101  Sum_probs=72.8

Q ss_pred             CCCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchh------------------HHHHHhcCCCCCeEEEEeC
Q 018512           39 GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPG------------------VTADISHMDTGAVVRGFLG  100 (354)
Q Consensus        39 ~~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g------------------~~~dl~~~~~~~~v~~~~~  100 (354)
                      -..+++|.|+||+|++|++++..|+..|.  +|+++|+.....                  ...++.... ...+..+..
T Consensus         8 ~~~~~~vlVTG~tGfIG~~l~~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~~v~~~~~   84 (404)
T 1i24_A            8 HHHGSRVMVIGGDGYCGWATALHLSKKNY--EVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALT-GKSIELYVG   84 (404)
T ss_dssp             ----CEEEEETTTSHHHHHHHHHHHHTTC--EEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHH-CCCCEEEES
T ss_pred             ccCCCeEEEeCCCcHHHHHHHHHHHhCCC--eEEEEEecCccccccccccccccccchhhhhhhhHhhcc-CCceEEEEC
Confidence            34568999999999999999999999887  999999753110                  111111100 111222211


Q ss_pred             -C---CcHHhhhCC--CcEEEEcCCCCCCC--CCCH---HHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 018512          101 -Q---PQLENALTG--MDLVIIPAGVPRKP--GMTR---DDLFNINAGIVRTLCEGIAKCCPNATVNLIS  159 (354)
Q Consensus       101 -~---~d~~~al~~--aDvVIi~ag~~~~~--g~~r---~d~~~~n~~~~~~i~~~i~~~~p~a~viv~t  159 (354)
                       -   .++.+++++  +|+||++||.....  ....   ...+..|+....++++.+.+.+....+|++|
T Consensus        85 Dl~d~~~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~~~~V~~S  154 (404)
T 1i24_A           85 DICDFEFLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFGEECHLVKLG  154 (404)
T ss_dssp             CTTSHHHHHHHHHHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEC
T ss_pred             CCCCHHHHHHHHhccCCCEEEECCCCCCccchhhCccchhhhHHHHHHHHHHHHHHHHHhCCCcEEEEeC
Confidence             1   224456777  99999999864311  0111   2356789999999999999887533455554

>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}

Probab=97.92  E-value=6.1e-05  Score=69.93  Aligned_cols=119  Identities=19%  Similarity=0.261  Sum_probs=70.5

Q ss_pred             CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCC----CCe-----EEEEeCCCcHHhhhCCC
Q 018512           41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDT----GAV-----VRGFLGQPQLENALTGM  111 (354)
Q Consensus        41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~----~~~-----v~~~~~~~d~~~al~~a  111 (354)
                      .+|||+|||+ |.+|+.++..|...|+  +|.++|+++...  ..+.....    ...     +... ...+..++++++
T Consensus         2 ~~m~i~iiG~-G~~G~~~a~~l~~~g~--~V~~~~r~~~~~--~~~~~~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~   75 (316)
T 2ew2_A            2 NAMKIAIAGA-GAMGSRLGIMLHQGGN--DVTLIDQWPAHI--EAIRKNGLIADFNGEEVVANLPIF-SPEEIDHQNEQV   75 (316)
T ss_dssp             --CEEEEECC-SHHHHHHHHHHHHTTC--EEEEECSCHHHH--HHHHHHCEEEEETTEEEEECCCEE-CGGGCCTTSCCC
T ss_pred             CCCeEEEECc-CHHHHHHHHHHHhCCC--cEEEEECCHHHH--HHHHhCCEEEEeCCCeeEecceee-cchhhcccCCCC
Confidence            3589999999 9999999999999887  999999975211  11211110    000     1111 111222334599


Q ss_pred             cEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecCCCCCchHHHHHHHHHhCCCCCCCEE-Eec
Q 018512          112 DLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLL-GVT  188 (354)
Q Consensus       112 DvVIi~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~-p~a~viv~tNPv~~~~~~~~~~~~~~~~~p~~kvi-G~t  188 (354)
                      |+||++...                ..+.++++.+..+. |+.+|+..+|..+...     .+.+  .+++.+++ |.+
T Consensus        76 d~vi~~v~~----------------~~~~~v~~~l~~~l~~~~~iv~~~~g~~~~~-----~l~~--~~~~~~vi~g~~  131 (316)
T 2ew2_A           76 DLIIALTKA----------------QQLDAMFKAIQPMITEKTYVLCLLNGLGHED-----VLEK--YVPKENILVGIT  131 (316)
T ss_dssp             SEEEECSCH----------------HHHHHHHHHHGGGCCTTCEEEECCSSSCTHH-----HHTT--TSCGGGEEEEEE
T ss_pred             CEEEEEecc----------------ccHHHHHHHHHHhcCCCCEEEEecCCCCcHH-----HHHH--HcCCccEEEEEe
Confidence            999998421                12355666677665 6788888888776432     2222  35555777 443

>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}

Probab=97.92  E-value=7e-05  Score=74.01  Aligned_cols=113  Identities=15%  Similarity=0.130  Sum_probs=73.0

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCC---C-------------CCeEEEEeCCCcHH
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMD---T-------------GAVVRGFLGQPQLE  105 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~---~-------------~~~v~~~~~~~d~~  105 (354)
                      ..+|+|||+ |++|..+|..|+..|+  +|+++|+++.+-  ..+....   .             ...++.   ++|+.
T Consensus         8 ~~~~~vIGl-G~vG~~~A~~La~~G~--~V~~~D~~~~kv--~~l~~g~~~~~epgl~~~~~~~~~~g~l~~---ttd~~   79 (446)
T 4a7p_A            8 SVRIAMIGT-GYVGLVSGACFSDFGH--EVVCVDKDARKI--ELLHQNVMPIYEPGLDALVASNVKAGRLSF---TTDLA   79 (446)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTC--EEEEECSCSTTH--HHHTTTCCSSCCTTHHHHHHHHHHTTCEEE---ESCHH
T ss_pred             ceEEEEEcC-CHHHHHHHHHHHHCCC--EEEEEeCCHHHH--HHHhcCCCCccCCCHHHHHHhhcccCCEEE---ECCHH
Confidence            459999999 9999999999999998  999999987321  2222210   0             122443   45788


Q ss_pred             hhhCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEe-cCCCCCchH
Q 018512          106 NALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLI-SNPVNSTVP  167 (354)
Q Consensus       106 ~al~~aDvVIi~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~-p~a~viv~-tNPv~~~~~  167 (354)
                      +++++||+||++.+.|...+...     -++..+++.++.+.++. +..+|+.. |-|.+..-.
T Consensus        80 ea~~~aDvvii~Vptp~~~~~~~-----~Dl~~v~~v~~~i~~~l~~g~iVV~~STv~pgtt~~  138 (446)
T 4a7p_A           80 EGVKDADAVFIAVGTPSRRGDGH-----ADLSYVFAAAREIAENLTKPSVIVTKSTVPVGTGDE  138 (446)
T ss_dssp             HHHTTCSEEEECCCCCBCTTTCC-----BCTHHHHHHHHHHHHSCCSCCEEEECSCCCTTHHHH
T ss_pred             HHHhcCCEEEEEcCCCCccccCC-----ccHHHHHHHHHHHHHhcCCCCEEEEeCCCCchHHHH
Confidence            89999999999988775421111     12334555556666554 45555554 455554433

>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}

Probab=97.91  E-value=9.5e-06  Score=75.26  Aligned_cols=167  Identities=16%  Similarity=0.070  Sum_probs=91.5

Q ss_pred             CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCch--hHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcC
Q 018512           41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP--GVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA  118 (354)
Q Consensus        41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~--g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~a  118 (354)
                      .++||.|+||+|++|++++..|+..|.  +|+.+|++...  +....+.+......+.      -....+.++|+||++|
T Consensus         6 ~~~~vlVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~------~~~~Dl~~~d~vi~~a   77 (321)
T 3vps_A            6 LKHRILITGGAGFIGGHLARALVASGE--EVTVLDDLRVPPMIPPEGTGKFLEKPVLE------LEERDLSDVRLVYHLA   77 (321)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTC--CEEEECCCSSCCSSCCTTSSEEECSCGGG------CCHHHHTTEEEEEECC
T ss_pred             CCCeEEEECCCChHHHHHHHHHHHCCC--EEEEEecCCcccccchhhhhhhccCCCee------EEeCccccCCEEEECC
Confidence            357999999999999999999999987  89999986521  0000011100001111      1234456999999998


Q ss_pred             CCCCCC--CCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCCchHHHHHHHHHhCCCCCCCEEEeccchHHHHH
Q 018512          119 GVPRKP--GMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRAN  196 (354)
Q Consensus       119 g~~~~~--g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~~~~~~~~~~p~~kviG~t~ld~~r~~  196 (354)
                      +.....  .....+.+. |+....++++.+++.+...+|.+.|.-+.....  ...+.......+...+|.+.....++-
T Consensus        78 ~~~~~~~~~~~~~~~~~-n~~~~~~ll~a~~~~~v~~~v~~SS~~v~~~~~--~~~~~E~~~~~p~~~Y~~sK~~~E~~~  154 (321)
T 3vps_A           78 SHKSVPRSFKQPLDYLD-NVDSGRHLLALCTSVGVPKVVVGSTCEVYGQAD--TLPTPEDSPLSPRSPYAASKVGLEMVA  154 (321)
T ss_dssp             CCCCHHHHTTSTTTTHH-HHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCS--SSSBCTTSCCCCCSHHHHHHHHHHHHH
T ss_pred             ccCChHHHHhCHHHHHH-HHHHHHHHHHHHHHcCCCeEEEecCHHHhCCCC--CCCCCCCCCCCCCChhHHHHHHHHHHH
Confidence            865310  011223345 999999999999988755555544421100000  000001111222334444444445555


Q ss_pred             HHHHHHhCC-CCCCCc-ceEEeec
Q 018512          197 TFVAEVLGL-DPRDVD-VPVVGGH  218 (354)
Q Consensus       197 ~~la~~l~v-~~~~v~-~~v~G~h  218 (354)
                      ..+++..|+ +..-++ +.++|..
T Consensus       155 ~~~~~~~~~~~~~ilRp~~v~G~~  178 (321)
T 3vps_A          155 GAHQRASVAPEVGIVRFFNVYGPG  178 (321)
T ss_dssp             HHHHHSSSSCEEEEEEECEEECTT
T ss_pred             HHHHHHcCCCceEEEEeccccCcC
Confidence            555555566 443343 4567754

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D

Probab=97.91  E-value=1.4e-05  Score=73.08  Aligned_cols=104  Identities=12%  Similarity=0.123  Sum_probs=69.3

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhC--CCCcEEEEEecCCchhHHHHHhcCCCCCeEEE-EeCCCcHHhhhCCCcEEEEcCC
Q 018512           43 FKVAILGAAGGIGQPLAMLMKIN--PLVSVLHLYDVVNTPGVTADISHMDTGAVVRG-FLGQPQLENALTGMDLVIIPAG  119 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~--~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~-~~~~~d~~~al~~aDvVIi~ag  119 (354)
                      |||.|+||+|++|++++..|+..  +.  +|+.++++.....  ++..... ..+.. +....++.++++++|+||++++
T Consensus         1 ~~ilVtGatG~iG~~l~~~L~~~~~g~--~V~~~~r~~~~~~--~l~~~~~-~~~~~D~~d~~~l~~~~~~~d~vi~~a~   75 (287)
T 2jl1_A            1 FSIAVTGATGQLGGLVIQHLLKKVPAS--QIIAIVRNVEKAS--TLADQGV-EVRHGDYNQPESLQKAFAGVSKLLFISG   75 (287)
T ss_dssp             CCEEETTTTSHHHHHHHHHHTTTSCGG--GEEEEESCTTTTH--HHHHTTC-EEEECCTTCHHHHHHHTTTCSEEEECCC
T ss_pred             CeEEEEcCCchHHHHHHHHHHHhCCCC--eEEEEEcCHHHHh--HHhhcCC-eEEEeccCCHHHHHHHHhcCCEEEEcCC
Confidence            58999999999999999999887  65  8999998762211  1221111 11111 1111245678899999999987


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 018512          120 VPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  159 (354)
Q Consensus       120 ~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~t  159 (354)
                      ..  .+    +  ..|+....++++.+++.+...+|.+.|
T Consensus        76 ~~--~~----~--~~n~~~~~~l~~a~~~~~~~~~v~~Ss  107 (287)
T 2jl1_A           76 PH--YD----N--TLLIVQHANVVKAARDAGVKHIAYTGY  107 (287)
T ss_dssp             CC--SC----H--HHHHHHHHHHHHHHHHTTCSEEEEEEE
T ss_pred             CC--cC----c--hHHHHHHHHHHHHHHHcCCCEEEEECC
Confidence            53  11    1  458888899999998876555554444

>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*

Probab=97.90  E-value=1.2e-05  Score=73.97  Aligned_cols=99  Identities=14%  Similarity=0.083  Sum_probs=69.8

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCC--CcEEEEcCCC
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTG--MDLVIIPAGV  120 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~--aDvVIi~ag~  120 (354)
                      |||.|+||+|++|++++..|+ .|.  +|+.+|++..      ....    ++.   ...++.+++++  +|+||++|+.
T Consensus         1 m~ilVtGatG~iG~~l~~~L~-~g~--~V~~~~r~~~------~~~~----D~~---d~~~~~~~~~~~~~d~vih~a~~   64 (299)
T 1n2s_A            1 MNILLFGKTGQVGWELQRSLA-PVG--NLIALDVHSK------EFCG----DFS---NPKGVAETVRKLRPDVIVNAAAH   64 (299)
T ss_dssp             CEEEEECTTSHHHHHHHHHTT-TTS--EEEEECTTCS------SSCC----CTT---CHHHHHHHHHHHCCSEEEECCCC
T ss_pred             CeEEEECCCCHHHHHHHHHhh-cCC--eEEEeccccc------cccc----cCC---CHHHHHHHHHhcCCCEEEECccc
Confidence            689999999999999999998 776  9999998651      0001    110   11234566776  9999999986


Q ss_pred             CCC--CCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 018512          121 PRK--PGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  159 (354)
Q Consensus       121 ~~~--~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~t  159 (354)
                      ...  ......+.+..|+....++++.+++.+.  .++.+|
T Consensus        65 ~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~--~~v~~S  103 (299)
T 1n2s_A           65 TAVDKAESEPELAQLLNATSVEAIAKAANETGA--WVVHYS  103 (299)
T ss_dssp             CCHHHHTTCHHHHHHHHTHHHHHHHHHHTTTTC--EEEEEE
T ss_pred             CCHhhhhcCHHHHHHHHHHHHHHHHHHHHHcCC--cEEEEe
Confidence            431  1134556778899999999999987654  444443

>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*

Probab=97.90  E-value=1.6e-05  Score=70.00  Aligned_cols=99  Identities=17%  Similarity=0.223  Sum_probs=61.9

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCch--hHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcCCC
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP--GVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGV  120 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~--g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~ag~  120 (354)
                      |||+||||+|.+|+.++..|...++  +|.++|+++..  ....++........+..    .++.++++++|+||++...
T Consensus         1 m~i~iiGa~G~~G~~ia~~l~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~D~Vi~~~~~   74 (212)
T 1jay_A            1 MRVALLGGTGNLGKGLALRLATLGH--EIVVGSRREEKAEAKAAEYRRIAGDASITG----MKNEDAAEACDIAVLTIPW   74 (212)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTTTC--EEEEEESSHHHHHHHHHHHHHHHSSCCEEE----EEHHHHHHHCSEEEECSCH
T ss_pred             CeEEEEcCCCHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHhccccccCCCCh----hhHHHHHhcCCEEEEeCCh
Confidence            6899999559999999999998887  89999987521  11111110000012331    2567889999999998531


Q ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCC
Q 018512          121 PRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVN  163 (354)
Q Consensus       121 ~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv~  163 (354)
                               +       .+.++++.+.+..++.+++..+|+.+
T Consensus        75 ---------~-------~~~~~~~~l~~~~~~~~vi~~~~g~~  101 (212)
T 1jay_A           75 ---------E-------HAIDTARDLKNILREKIVVSPLVPVS  101 (212)
T ss_dssp             ---------H-------HHHHHHHHTHHHHTTSEEEECCCCEE
T ss_pred             ---------h-------hHHHHHHHHHHHcCCCEEEEcCCCcC
Confidence                     1       12233333433335778888888765

>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}

Probab=97.90  E-value=1.5e-05  Score=72.61  Aligned_cols=93  Identities=16%  Similarity=0.237  Sum_probs=65.8

Q ss_pred             CCCCeEEEEcCCCchHHHHHHHHHhCCCC--cEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEc
Q 018512           40 AAGFKVAILGAAGGIGQPLAMLMKINPLV--SVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIP  117 (354)
Q Consensus        40 ~~~~kI~IiGa~G~vG~~~a~~l~~~~~~--~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~  117 (354)
                      .+.|||+|||+ |.+|+.++..|...+..  .+|.++|+++..        ..    +..   ..+..++++++|+||++
T Consensus         2 m~~m~i~iiG~-G~mG~~~a~~l~~~g~~~~~~v~~~~~~~~~--------~g----~~~---~~~~~~~~~~~D~vi~~   65 (262)
T 2rcy_A            2 MENIKLGFMGL-GQMGSALAHGIANANIIKKENLFYYGPSKKN--------TT----LNY---MSSNEELARHCDIIVCA   65 (262)
T ss_dssp             CSSSCEEEECC-SHHHHHHHHHHHHHTSSCGGGEEEECSSCCS--------SS----SEE---CSCHHHHHHHCSEEEEC
T ss_pred             CCCCEEEEECc-CHHHHHHHHHHHHCCCCCCCeEEEEeCCccc--------Cc----eEE---eCCHHHHHhcCCEEEEE
Confidence            34689999999 99999999999887721  379999997632        11    222   24567788999999998


Q ss_pred             CCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCC
Q 018512          118 AGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNS  164 (354)
Q Consensus       118 ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv~~  164 (354)
                      .. +.               .+.++++.+..+.++..|+..+|.++.
T Consensus        66 v~-~~---------------~~~~v~~~l~~~l~~~~vv~~~~gi~~   96 (262)
T 2rcy_A           66 VK-PD---------------IAGSVLNNIKPYLSSKLLISICGGLNI   96 (262)
T ss_dssp             SC-TT---------------THHHHHHHSGGGCTTCEEEECCSSCCH
T ss_pred             eC-HH---------------HHHHHHHHHHHhcCCCEEEEECCCCCH
Confidence            53 11               134555566666677777777887765

>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*

Probab=97.89  E-value=5.9e-05  Score=71.68  Aligned_cols=101  Identities=20%  Similarity=0.258  Sum_probs=67.3

Q ss_pred             CCCeEEEEcCCCchHHHHHHHHHhCC-------CCcEEEEEecCCc-----hhHHHHHhcCC--C------CCeEEEEeC
Q 018512           41 AGFKVAILGAAGGIGQPLAMLMKINP-------LVSVLHLYDVVNT-----PGVTADISHMD--T------GAVVRGFLG  100 (354)
Q Consensus        41 ~~~kI~IiGa~G~vG~~~a~~l~~~~-------~~~ei~L~D~~~~-----~g~~~dl~~~~--~------~~~v~~~~~  100 (354)
                      ..|||+|||+ |.+|+.++..|...|       +  +|.++|+++.     ......-.+..  .      ...+..   
T Consensus         7 ~~mkI~iIG~-G~mG~~~a~~l~~~g~~~~~~~~--~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~---   80 (354)
T 1x0v_A            7 ASKKVCIVGS-GNWGSAIAKIVGGNAAQLAQFDP--RVTMWVFEEDIGGKKLTEIINTQHENVKYLPGHKLPPNVVA---   80 (354)
T ss_dssp             CCEEEEEECC-SHHHHHHHHHHHHHHHHCTTEEE--EEEEECCCCBSSSSBHHHHHHHHSCCTTTSTTCCCCTTEEE---
T ss_pred             CCCeEEEECC-CHHHHHHHHHHHhcCCcccCCCC--eEEEEEcChhhhhhHHHHHHHhcCcccccCCcccCccCeEE---
Confidence            4579999999 999999999998877       5  8999999764     33322211110  0      112333   


Q ss_pred             CCcHHhhhCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecCCCC
Q 018512          101 QPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVN  163 (354)
Q Consensus       101 ~~d~~~al~~aDvVIi~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~-p~a~viv~tNPv~  163 (354)
                      ++++.+++++||+||++...                ..+.++++.+..+. ++.+|+..+|-.+
T Consensus        81 ~~~~~~~~~~aD~Vilav~~----------------~~~~~v~~~i~~~l~~~~ivv~~~~Gi~  128 (354)
T 1x0v_A           81 VPDVVQAAEDADILIFVVPH----------------QFIGKICDQLKGHLKANATGISLIKGVD  128 (354)
T ss_dssp             ESSHHHHHTTCSEEEECCCG----------------GGHHHHHHHHTTCSCTTCEEEECCCCBC
T ss_pred             EcCHHHHHcCCCEEEEeCCH----------------HHHHHHHHHHHhhCCCCCEEEEECCccC
Confidence            24667889999999998521                12445666676654 5778888887544

>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*

Probab=97.88  E-value=8e-05  Score=71.42  Aligned_cols=175  Identities=16%  Similarity=0.107  Sum_probs=97.0

Q ss_pred             CCeEEEEcCCCchHHHHHHHHH-hCCCCcEEEEEecCCch----------hHHHH-HhcCCC---CCe---EEEEeC-CC
Q 018512           42 GFKVAILGAAGGIGQPLAMLMK-INPLVSVLHLYDVVNTP----------GVTAD-ISHMDT---GAV---VRGFLG-QP  102 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~-~~~~~~ei~L~D~~~~~----------g~~~d-l~~~~~---~~~---v~~~~~-~~  102 (354)
                      .|+|.|+||+|++|++++..|+ ..|.  +|+++|+....          ....+ +.....   ...   +..+.. -.
T Consensus         2 ~m~vlVTGatG~iG~~l~~~L~~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~   79 (397)
T 1gy8_A            2 HMRVLVCGGAGYIGSHFVRALLRDTNH--SVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVR   79 (397)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCCC--EEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTT
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHhCCC--EEEEEecCCcccccccccchHHHHHHHHHHhhccccccCCceEEEEECCCC
Confidence            3799999999999999999999 8887  89999986421          11111 111110   001   222211 12


Q ss_pred             ---cHHhhhC--C-CcEEEEcCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCCchH--HHH--
Q 018512          103 ---QLENALT--G-MDLVIIPAGVPRKP--GMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVP--IAA--  170 (354)
Q Consensus       103 ---d~~~al~--~-aDvVIi~ag~~~~~--g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv~~~~~--~~~--  170 (354)
                         ++.++++  + +|+||++|+.....  .....+++..|+.....+++.+.+.....+|.+.|.-+.-...  ...  
T Consensus        80 d~~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~iv~~SS~~v~g~~~~~~~~~~  159 (397)
T 1gy8_A           80 NEDFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLHKCDKIIFSSSAAIFGNPTMGSVSTN  159 (397)
T ss_dssp             CHHHHHHHHHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGTBSCCC-----C
T ss_pred             CHHHHHHHHHhcCCCCEEEECCCccCcCcchhhHHHHHHHHhHHHHHHHHHHHHhCCCEEEEECCHHHhCCCCccccccc
Confidence               2345566  6 99999999865311  1234557788999999999999887655555544421100000  000  


Q ss_pred             -HHHHHhCCCCCCCEEEeccchHHHHHHHHHHHhCCCCCCCc-ceEEeec
Q 018512          171 -EVFKKAGTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVD-VPVVGGH  218 (354)
Q Consensus       171 -~~~~~~~~~p~~kviG~t~ld~~r~~~~la~~l~v~~~~v~-~~v~G~h  218 (354)
                       ..+.......+...+|.+.....++-..+++.+|++..-++ +.++|.+
T Consensus       160 ~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~gi~~~ilRp~~v~G~~  209 (397)
T 1gy8_A          160 AEPIDINAKKSPESPYGESKLIAERMIRDCAEAYGIKGICLRYFNACGAH  209 (397)
T ss_dssp             CCCBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECCC
T ss_pred             ccCcCccCCCCCCCchHHHHHHHHHHHHHHHHHHCCcEEEEeccceeCCC
Confidence             00000000111233444444555566666666677655554 4667764

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A

Probab=97.88  E-value=3.3e-05  Score=69.35  Aligned_cols=114  Identities=14%  Similarity=0.122  Sum_probs=68.3

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc--hhHHHHHhcCCCCCeEEEEe-CCCc---HHhhh-------
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFL-GQPQ---LENAL-------  108 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~--~g~~~dl~~~~~~~~v~~~~-~~~d---~~~al-------  108 (354)
                      .++|.|+||+|.+|..++..|+..|.  +|+++|++..  .....++...   ..+..+. +-+|   +.+++       
T Consensus         6 ~k~vlVtGasggiG~~~a~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~~~~~   80 (251)
T 1zk4_A            6 GKVAIITGGTLGIGLAIATKFVEEGA--KVMITGRHSDVGEKAAKSVGTP---DQIQFFQHDSSDEDGWTKLFDATEKAF   80 (251)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHCCT---TTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CcEEEEeCCCChHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHhhcc---CceEEEECCCCCHHHHHHHHHHHHHHh
Confidence            45899999999999999999999987  8999998752  2222233221   1222221 1122   22333       


Q ss_pred             CCCcEEEEcCCCCCCC---CCC---HHHHHHHHHH----HHHHHHHHHhhhCCCeEEEEecC
Q 018512          109 TGMDLVIIPAGVPRKP---GMT---RDDLFNINAG----IVRTLCEGIAKCCPNATVNLISN  160 (354)
Q Consensus       109 ~~aDvVIi~ag~~~~~---g~~---r~d~~~~n~~----~~~~i~~~i~~~~p~a~viv~tN  160 (354)
                      ...|+||++||.....   ..+   ....+..|+.    ..+.+.+.+++....+.|+++|.
T Consensus        81 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~isS  142 (251)
T 1zk4_A           81 GPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSS  142 (251)
T ss_dssp             SSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECC
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCC
Confidence            3589999999865321   122   2334566766    44555555554433266776664

>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}

Probab=97.86  E-value=3.3e-05  Score=70.01  Aligned_cols=100  Identities=16%  Similarity=0.159  Sum_probs=62.9

Q ss_pred             CCCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhH------------HHHHhcCCCCCeEEEEeCCCcHHh
Q 018512           39 GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGV------------TADISHMDTGAVVRGFLGQPQLEN  106 (354)
Q Consensus        39 ~~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~------------~~dl~~~~~~~~v~~~~~~~d~~~  106 (354)
                      +...+||+|||+ |.+|.+++..|+..|+  +|+++|+++....            ..++....  .....    .+..+
T Consensus        16 ~~~~~kIgiIG~-G~mG~alA~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~----~~~~e   86 (245)
T 3dtt_A           16 YFQGMKIAVLGT-GTVGRTMAGALADLGH--EVTIGTRDPKATLARAEPDAMGAPPFSQWLPEH--PHVHL----AAFAD   86 (245)
T ss_dssp             ---CCEEEEECC-SHHHHHHHHHHHHTTC--EEEEEESCHHHHHTCC-------CCHHHHGGGS--TTCEE----EEHHH
T ss_pred             ccCCCeEEEECC-CHHHHHHHHHHHHCCC--EEEEEeCChhhhhhhhhhhhhcchhhhHHHhhc--Cceec----cCHHH
Confidence            445689999998 9999999999999988  9999999752200            12222211  11121    24578


Q ss_pred             hhCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCC
Q 018512          107 ALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPV  162 (354)
Q Consensus       107 al~~aDvVIi~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv  162 (354)
                      ++++||+||++....            .-.+.+.++.   ...-++.+|+.++||.
T Consensus        87 ~~~~aDvVilavp~~------------~~~~~~~~i~---~~~l~g~ivi~~s~~~  127 (245)
T 3dtt_A           87 VAAGAELVVNATEGA------------SSIAALTAAG---AENLAGKILVDIANPL  127 (245)
T ss_dssp             HHHHCSEEEECSCGG------------GHHHHHHHHC---HHHHTTSEEEECCCCE
T ss_pred             HHhcCCEEEEccCcH------------HHHHHHHHhh---hhhcCCCEEEECCCCC
Confidence            899999999984221            0112333331   2222678889999986

>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*

Probab=97.86  E-value=5.8e-05  Score=71.13  Aligned_cols=69  Identities=16%  Similarity=0.217  Sum_probs=48.9

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHh-hhCCCcEEEEcC
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLEN-ALTGMDLVIIPA  118 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~-al~~aDvVIi~a  118 (354)
                      .+||+|||+ |.+|..++..|...|+..+|+++|+++...  ..+..... . ...   ++++++ ++++||+||++.
T Consensus        33 ~~kI~IIG~-G~mG~slA~~l~~~G~~~~V~~~dr~~~~~--~~a~~~G~-~-~~~---~~~~~~~~~~~aDvVilav  102 (314)
T 3ggo_A           33 MQNVLIVGV-GFMGGSFAKSLRRSGFKGKIYGYDINPESI--SKAVDLGI-I-DEG---TTSIAKVEDFSPDFVMLSS  102 (314)
T ss_dssp             CSEEEEESC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHH--HHHHHTTS-C-SEE---ESCTTGGGGGCCSEEEECS
T ss_pred             CCEEEEEee-CHHHHHHHHHHHhCCCCCEEEEEECCHHHH--HHHHHCCC-c-chh---cCCHHHHhhccCCEEEEeC
Confidence            479999998 999999999999998766899999976211  11122211 0 011   135567 799999999984

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}

Probab=97.86  E-value=5.4e-05  Score=67.78  Aligned_cols=102  Identities=20%  Similarity=0.194  Sum_probs=68.0

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCch--h-HHHHHhcCCCCCeEEEEeCCCcHHhhh----CCCcEEE
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP--G-VTADISHMDTGAVVRGFLGQPQLENAL----TGMDLVI  115 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~--g-~~~dl~~~~~~~~v~~~~~~~d~~~al----~~aDvVI  115 (354)
                      ++|.|+||+|++|++++..|+..|.  +|+++|++...  . ...|+.+.            .++++++    .+.|+||
T Consensus         2 k~vlVtGasg~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~D~~~~------------~~~~~~~~~~~~~~d~vi   67 (255)
T 2dkn_A            2 SVIAITGSASGIGAALKELLARAGH--TVIGIDRGQADIEADLSTPGGRE------------TAVAAVLDRCGGVLDGLV   67 (255)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESSSSSEECCTTSHHHHH------------HHHHHHHHHHTTCCSEEE
T ss_pred             cEEEEeCCCcHHHHHHHHHHHhCCC--EEEEEeCChhHccccccCCcccH------------HHHHHHHHHcCCCccEEE
Confidence            4799999999999999999999887  89999987521  0 11111111            1233344    3899999


Q ss_pred             EcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhh---CCCeEEEEec
Q 018512          116 IPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKC---CPNATVNLIS  159 (354)
Q Consensus       116 i~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~---~p~a~viv~t  159 (354)
                      ++||.... .......+..|+.....+++.+.+.   ...+.|+++|
T Consensus        68 ~~Ag~~~~-~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~s  113 (255)
T 2dkn_A           68 CCAGVGVT-AANSGLVVAVNYFGVSALLDGLAEALSRGQQPAAVIVG  113 (255)
T ss_dssp             ECCCCCTT-SSCHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEEC
T ss_pred             ECCCCCCc-chhHHHHHHHHhHHHHHHHHHHHHHhhhcCCceEEEEe
Confidence            99987542 2235566778887777777766654   2234555554

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}

Probab=97.84  E-value=0.00013  Score=65.78  Aligned_cols=143  Identities=15%  Similarity=0.183  Sum_probs=83.4

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCCCCeEEEEe-CCCc---HHhhh-------
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQ---LENAL-------  108 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~~~~v~~~~-~~~d---~~~al-------  108 (354)
                      .+++.|+||+|.+|.+++..|+..|.  +|+++|++.  ......++....  ..+..+. +-+|   .++.+       
T Consensus         9 ~k~vlITGas~giG~~~a~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~   84 (253)
T 3qiv_A            9 NKVGIVTGSGGGIGQAYAEALAREGA--AVVVADINAEAAEAVAKQIVADG--GTAISVAVDVSDPESAKAMADRTLAEF   84 (253)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHTT--CEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCC--EEEEEcCCHHHHHHHHHHHHhcC--CcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            45899999999999999999999998  899999976  222333443322  2222221 1122   22223       


Q ss_pred             CCCcEEEEcCCCCC--C----CCCC---HHHHHHHHHHH----HHHHHHHHhhhCCCeEEEEecCCCCCchHHHHHHHHH
Q 018512          109 TGMDLVIIPAGVPR--K----PGMT---RDDLFNINAGI----VRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKK  175 (354)
Q Consensus       109 ~~aDvVIi~ag~~~--~----~g~~---r~d~~~~n~~~----~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~~~~~~  175 (354)
                      ...|+||+.||...  .    ...+   ....+..|+..    .+.+.+.+++.. .+.|+++|....            
T Consensus        85 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~------------  151 (253)
T 3qiv_A           85 GGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGALWCTRAVYKKMTKRG-GGAIVNQSSTAA------------  151 (253)
T ss_dssp             SCCCEEEECCCCCCGGGGGCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-CEEEEEECC---------------
T ss_pred             CCCCEEEECCCcCCCCCCcccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-CCEEEEECCccc------------
Confidence            38999999998731  1    1122   23455667666    666666666554 566676664321            


Q ss_pred             hCCCCCCCEEEeccchHHHHHHHHHHHhC
Q 018512          176 AGTYDPKKLLGVTMLDVVRANTFVAEVLG  204 (354)
Q Consensus       176 ~~~~p~~kviG~t~ld~~r~~~~la~~l~  204 (354)
                         ++....++.+......+.+.++..++
T Consensus       152 ---~~~~~~Y~asK~a~~~~~~~la~e~~  177 (253)
T 3qiv_A          152 ---WLYSNYYGLAKVGINGLTQQLSRELG  177 (253)
T ss_dssp             -----------CCHHHHHHHHHHHHHHTT
T ss_pred             ---cCCCchhHHHHHHHHHHHHHHHHHHh
Confidence               12223466665555667788888874

>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}

Probab=97.84  E-value=4.6e-05  Score=71.61  Aligned_cols=105  Identities=22%  Similarity=0.245  Sum_probs=69.6

Q ss_pred             CCCCeEEEEcCCCchHHHHHHHHHhCCC-----CcEEEEEecCCchhHHHHHhcCCCCCeEEEEe----CCCcHHhhh-C
Q 018512           40 AAGFKVAILGAAGGIGQPLAMLMKINPL-----VSVLHLYDVVNTPGVTADISHMDTGAVVRGFL----GQPQLENAL-T  109 (354)
Q Consensus        40 ~~~~kI~IiGa~G~vG~~~a~~l~~~~~-----~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~----~~~d~~~al-~  109 (354)
                      .+.|+|.|+||+|++|++++..|+..|.     ..+|+++|++.....     .. ....+..+.    ...++.+++ .
T Consensus        12 ~~~~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r~~~~~~-----~~-~~~~~~~~~~Dl~d~~~~~~~~~~   85 (342)
T 2hrz_A           12 FQGMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAP-----AG-FSGAVDARAADLSAPGEAEKLVEA   85 (342)
T ss_dssp             CSCEEEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEESSCCCCC-----TT-CCSEEEEEECCTTSTTHHHHHHHT
T ss_pred             ccCCEEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEccCCccc-----cc-cCCceeEEEcCCCCHHHHHHHHhc
Confidence            3467999999999999999999998871     028999998752110     00 112233221    112345566 5


Q ss_pred             CCcEEEEcCCCCCCC-CCCHHHHHHHHHHHHHHHHHHHhhhC
Q 018512          110 GMDLVIIPAGVPRKP-GMTRDDLFNINAGIVRTLCEGIAKCC  150 (354)
Q Consensus       110 ~aDvVIi~ag~~~~~-g~~r~d~~~~n~~~~~~i~~~i~~~~  150 (354)
                      ++|+||++|+..... .....+.+..|+.....+++.+.+..
T Consensus        86 ~~d~vih~A~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~  127 (342)
T 2hrz_A           86 RPDVIFHLAAIVSGEAELDFDKGYRINLDGTRYLFDAIRIAN  127 (342)
T ss_dssp             CCSEEEECCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred             CCCEEEECCccCcccccccHHHHHHHHHHHHHHHHHHHHhcc
Confidence            899999999865310 11234556789999999999988765

>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}

Probab=97.84  E-value=6e-05  Score=70.99  Aligned_cols=120  Identities=13%  Similarity=0.127  Sum_probs=72.5

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHH----HhcCCCCCeEEE--EeCCCcHHhhhCCCcEEEE
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTAD----ISHMDTGAVVRG--FLGQPQLENALTGMDLVII  116 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~d----l~~~~~~~~v~~--~~~~~d~~~al~~aDvVIi  116 (354)
                      |||+|||+ |.+|..++..|...|.  +|.++|+++. ....+    +... .......  ...+.+.+++.+++|+||+
T Consensus         3 mkI~IiGa-GaiG~~~a~~L~~~g~--~V~~~~r~~~-~~i~~~Gl~~~~~-~~g~~~~~~~~~~~~~~~~~~~~DlVil   77 (320)
T 3i83_A            3 LNILVIGT-GAIGSFYGALLAKTGH--CVSVVSRSDY-ETVKAKGIRIRSA-TLGDYTFRPAAVVRSAAELETKPDCTLL   77 (320)
T ss_dssp             CEEEEESC-CHHHHHHHHHHHHTTC--EEEEECSTTH-HHHHHHCEEEEET-TTCCEEECCSCEESCGGGCSSCCSEEEE
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCC--eEEEEeCChH-HHHHhCCcEEeec-CCCcEEEeeeeeECCHHHcCCCCCEEEE
Confidence            79999999 9999999999999887  9999999762 11111    1110 1111111  0012355455559999999


Q ss_pred             cCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecCCCCCchHHHHHHHHHhCCCCCCCEEEe-ccc
Q 018512          117 PAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TML  190 (354)
Q Consensus       117 ~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~-p~a~viv~tNPv~~~~~~~~~~~~~~~~~p~~kviG~-t~l  190 (354)
                      +.-...                +.++++.++.+- ++..|+.+.|-++....     +.+.  +|..+|++- +..
T Consensus        78 avK~~~----------------~~~~l~~l~~~l~~~t~Iv~~~nGi~~~~~-----l~~~--~~~~~vl~g~~~~  130 (320)
T 3i83_A           78 CIKVVE----------------GADRVGLLRDAVAPDTGIVLISNGIDIEPE-----VAAA--FPDNEVISGLAFI  130 (320)
T ss_dssp             CCCCCT----------------TCCHHHHHTTSCCTTCEEEEECSSSSCSHH-----HHHH--STTSCEEEEEEEE
T ss_pred             ecCCCC----------------hHHHHHHHHhhcCCCCEEEEeCCCCChHHH-----HHHH--CCCCcEEEEEEEe
Confidence            853221                112334455443 67888888998876532     2333  556677654 543

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2

Probab=97.83  E-value=0.0002  Score=65.51  Aligned_cols=133  Identities=18%  Similarity=0.240  Sum_probs=71.7

Q ss_pred             chhhhhhhhcccCCCCCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCCCCeEEEEe-CC
Q 018512           25 ENSCLRQAKCRAKGGAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQ  101 (354)
Q Consensus        25 ~~~~~~~~~~~~~~~~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~~~~v~~~~-~~  101 (354)
                      ++..++.+...+......++|.|+||+|.+|..++..|+..|.  +|+++|++.  ......++....  ..+..+. +-
T Consensus        14 ~~~~~~~~~~~~~~~l~~k~vlITGasggIG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dl   89 (272)
T 1yb1_A           14 ENLYFQGHMPKRRKSVTGEIVLITGAGHGIGRLTAYEFAKLKS--KLVLWDINKHGLEETAAKCKGLG--AKVHTFVVDC   89 (272)
T ss_dssp             -----------CCCCCTTCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHTT--CCEEEEECCT
T ss_pred             hhheeccccCCcccccCCCEEEEECCCchHHHHHHHHHHHCCC--EEEEEEcCHHHHHHHHHHHHhcC--CeEEEEEeeC
Confidence            3444444333332334556899999999999999999999987  899999976  222223343322  1222221 11


Q ss_pred             Cc---HHhhh-------CCCcEEEEcCCCCCCCCC---C---HHHHHHHHHHHH----HHHHHHHhhhCCCeEEEEecCC
Q 018512          102 PQ---LENAL-------TGMDLVIIPAGVPRKPGM---T---RDDLFNINAGIV----RTLCEGIAKCCPNATVNLISNP  161 (354)
Q Consensus       102 ~d---~~~al-------~~aDvVIi~ag~~~~~g~---~---r~d~~~~n~~~~----~~i~~~i~~~~p~a~viv~tNP  161 (354)
                      .|   +.+++       .+.|+||++||.......   +   ....+..|+...    +.+.+.+++. ..+.||++|..
T Consensus        90 ~~~~~v~~~~~~~~~~~g~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~~~~iv~isS~  168 (272)
T 1yb1_A           90 SNREDIYSSAKKVKAEIGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKN-NHGHIVTVASA  168 (272)
T ss_dssp             TCHHHHHHHHHHHHHHTCCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-TCEEEEEECCC
T ss_pred             CCHHHHHHHHHHHHHHCCCCcEEEECCCcCCCcchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCCEEEEEech
Confidence            22   22223       378999999987542211   1   223455676664    4444444433 35666766654


Q ss_pred             C
Q 018512          162 V  162 (354)
Q Consensus       162 v  162 (354)
                      .
T Consensus       169 ~  169 (272)
T 1yb1_A          169 A  169 (272)
T ss_dssp             C
T ss_pred             h
Confidence            3

>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}

Probab=97.83  E-value=0.0001  Score=69.39  Aligned_cols=81  Identities=19%  Similarity=0.279  Sum_probs=51.2

Q ss_pred             cchhhhhhhhcccCCCCCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCc
Q 018512           24 QENSCLRQAKCRAKGGAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQ  103 (354)
Q Consensus        24 ~~~~~~~~~~~~~~~~~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d  103 (354)
                      +.+.+|++....  .+...|||+|||+ |.+|..++..|...|+  +|+++|+++.  ....+....    +..   .++
T Consensus        15 ~~~~~~~~~~~~--~~~~~~~I~iIG~-G~mG~~~a~~l~~~G~--~V~~~dr~~~--~~~~l~~~g----~~~---~~~   80 (320)
T 4dll_A           15 TENLYFQSMTVE--SDPYARKITFLGT-GSMGLPMARRLCEAGY--ALQVWNRTPA--RAASLAALG----ATI---HEQ   80 (320)
T ss_dssp             ----------------CCCSEEEEECC-TTTHHHHHHHHHHTTC--EEEEECSCHH--HHHHHHTTT----CEE---ESS
T ss_pred             ccccceechhhc--cccCCCEEEEECc-cHHHHHHHHHHHhCCC--eEEEEcCCHH--HHHHHHHCC----CEe---eCC
Confidence            445555553322  2345689999999 9999999999999998  9999999752  222333322    222   246


Q ss_pred             HHhhhCCCcEEEEcC
Q 018512          104 LENALTGMDLVIIPA  118 (354)
Q Consensus       104 ~~~al~~aDvVIi~a  118 (354)
                      +++++++||+||++.
T Consensus        81 ~~e~~~~aDvVi~~v   95 (320)
T 4dll_A           81 ARAAARDADIVVSML   95 (320)
T ss_dssp             HHHHHTTCSEEEECC
T ss_pred             HHHHHhcCCEEEEEC
Confidence            788999999999985

>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}

Probab=97.83  E-value=5.3e-05  Score=71.08  Aligned_cols=68  Identities=13%  Similarity=0.187  Sum_probs=51.3

Q ss_pred             CCCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcC
Q 018512           39 GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA  118 (354)
Q Consensus        39 ~~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~a  118 (354)
                      +.++|||+|||+ |.+|..++..|+..|+  +|+++|+++....  ++....    +..   .+++.+++++||+||++.
T Consensus        18 ~~~m~~I~iIG~-G~mG~~~A~~l~~~G~--~V~~~dr~~~~~~--~l~~~g----~~~---~~~~~~~~~~aDvvi~~v   85 (310)
T 3doj_A           18 GSHMMEVGFLGL-GIMGKAMSMNLLKNGF--KVTVWNRTLSKCD--ELVEHG----ASV---CESPAEVIKKCKYTIAML   85 (310)
T ss_dssp             CCCSCEEEEECC-SHHHHHHHHHHHHTTC--EEEEECSSGGGGH--HHHHTT----CEE---CSSHHHHHHHCSEEEECC
T ss_pred             cccCCEEEEECc-cHHHHHHHHHHHHCCC--eEEEEeCCHHHHH--HHHHCC----CeE---cCCHHHHHHhCCEEEEEc
Confidence            445689999999 9999999999999998  9999999863221  122221    122   346788899999999984

>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*

Probab=97.82  E-value=2.7e-05  Score=73.68  Aligned_cols=96  Identities=16%  Similarity=0.178  Sum_probs=70.2

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCC-----CCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeC----CCcHHhhhCC---
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINP-----LVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLG----QPQLENALTG---  110 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~-----~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~----~~d~~~al~~---  110 (354)
                      |||.|+||+|++|++++..|+..+     .  +|+.+|++.....   +..    ..+..+..    ..++.+++++   
T Consensus         2 ~~vlVtGatG~iG~~l~~~L~~~g~~~~~~--~V~~~~r~~~~~~---~~~----~~~~~~~~Dl~d~~~~~~~~~~~~~   72 (364)
T 2v6g_A            2 SVALIVGVTGIIGNSLAEILPLADTPGGPW--KVYGVARRTRPAW---HED----NPINYVQCDISDPDDSQAKLSPLTD   72 (364)
T ss_dssp             EEEEEETTTSHHHHHHHHHTTSTTCTTCSE--EEEEEESSCCCSC---CCS----SCCEEEECCTTSHHHHHHHHTTCTT
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCCCCce--EEEEEeCCCCccc---ccc----CceEEEEeecCCHHHHHHHHhcCCC
Confidence            689999999999999999998877     5  8999998762111   111    11222111    1234567888   


Q ss_pred             CcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhC
Q 018512          111 MDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC  150 (354)
Q Consensus       111 aDvVIi~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~  150 (354)
                      +|+||++|+...   ....+....|+....++++.+.+.+
T Consensus        73 ~d~vih~a~~~~---~~~~~~~~~n~~~~~~l~~a~~~~~  109 (364)
T 2v6g_A           73 VTHVFYVTWANR---STEQENCEANSKMFRNVLDAVIPNC  109 (364)
T ss_dssp             CCEEEECCCCCC---SSHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred             CCEEEECCCCCc---chHHHHHHHhHHHHHHHHHHHHHhc
Confidence            999999998652   3456678899999999999999874

>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}

Probab=97.81  E-value=1.7e-05  Score=73.45  Aligned_cols=167  Identities=14%  Similarity=0.083  Sum_probs=95.5

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhC--CCCcEEEEEecCCchhHHHHHhcCCCCCeEEE-EeCCCcHHhhhC--CCcEEEEc
Q 018512           43 FKVAILGAAGGIGQPLAMLMKIN--PLVSVLHLYDVVNTPGVTADISHMDTGAVVRG-FLGQPQLENALT--GMDLVIIP  117 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~--~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~-~~~~~d~~~al~--~aDvVIi~  117 (354)
                      |||.|+||+|++|++++..|+..  +.  +|+++|++.......  ...   ..+.. +....++.++++  ++|+||++
T Consensus         3 ~~vlVtGatG~iG~~l~~~L~~~~~g~--~V~~~~r~~~~~~~~--~~~---~~~~~D~~d~~~~~~~~~~~~~d~vih~   75 (312)
T 2yy7_A            3 PKILIIGACGQIGTELTQKLRKLYGTE--NVIASDIRKLNTDVV--NSG---PFEVVNALDFNQIEHLVEVHKITDIYLM   75 (312)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHHHHCGG--GEEEEESCCCSCHHH--HSS---CEEECCTTCHHHHHHHHHHTTCCEEEEC
T ss_pred             ceEEEECCccHHHHHHHHHHHHhCCCC--EEEEEcCCCcccccc--CCC---ceEEecCCCHHHHHHHHhhcCCCEEEEC
Confidence            68999999999999999999887  66  899999876221111  111   11111 111123456677  89999999


Q ss_pred             CCCCCCC-CCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCCchHHHHHHHHHhCCCCCCCEEEeccchHHHHH
Q 018512          118 AGVPRKP-GMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRAN  196 (354)
Q Consensus       118 ag~~~~~-g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~~~~~~~~~~p~~kviG~t~ld~~r~~  196 (354)
                      |+..... .....+.+..|+....++++.+.+.+.+.+|.+.|.-+.....- ...........+...+|.+.....++-
T Consensus        76 a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~-~~~~~e~~~~~~~~~Y~~sK~~~e~~~  154 (312)
T 2yy7_A           76 AALLSATAEKNPAFAWDLNMNSLFHVLNLAKAKKIKKIFWPSSIAVFGPTTP-KENTPQYTIMEPSTVYGISKQAGERWC  154 (312)
T ss_dssp             CCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHTTSCSEEECCEEGGGCCTTSC-SSSBCSSCBCCCCSHHHHHHHHHHHHH
T ss_pred             CccCCCchhhChHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHHHhCCCCC-CCCccccCcCCCCchhHHHHHHHHHHH
Confidence            9864211 12345567889999999999998865444443333211100000 000000000122334444555555565


Q ss_pred             HHHHHHhCCCCCCCc-ceEEee
Q 018512          197 TFVAEVLGLDPRDVD-VPVVGG  217 (354)
Q Consensus       197 ~~la~~l~v~~~~v~-~~v~G~  217 (354)
                      ..+++..|++..-++ +.++|.
T Consensus       155 ~~~~~~~~~~~~~lrp~~v~g~  176 (312)
T 2yy7_A          155 EYYHNIYGVDVRSIRYPGLISW  176 (312)
T ss_dssp             HHHHHHHCCEEECEEECEEECS
T ss_pred             HHHHHhcCCcEEEEeCCeEecC
Confidence            666666787666665 567774

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}

Probab=97.81  E-value=1e-05  Score=74.39  Aligned_cols=105  Identities=10%  Similarity=0.052  Sum_probs=67.5

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEE-EeCCCcHHhhhCC-CcEEEEcCC
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRG-FLGQPQLENALTG-MDLVIIPAG  119 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~-~~~~~d~~~al~~-aDvVIi~ag  119 (354)
                      +|||.|+|+ |++|++++..|+..|.  +|+.++++...     +. .. ...+.. +....++.+++++ +|+||++|+
T Consensus         3 ~~~ilVtGa-G~iG~~l~~~L~~~g~--~V~~~~r~~~~-----~~-~~-~~~~~~Dl~d~~~~~~~~~~~~d~vih~a~   72 (286)
T 3gpi_A            3 LSKILIAGC-GDLGLELARRLTAQGH--EVTGLRRSAQP-----MP-AG-VQTLIADVTRPDTLASIVHLRPEILVYCVA   72 (286)
T ss_dssp             CCCEEEECC-SHHHHHHHHHHHHTTC--CEEEEECTTSC-----CC-TT-CCEEECCTTCGGGCTTGGGGCCSEEEECHH
T ss_pred             CCcEEEECC-CHHHHHHHHHHHHCCC--EEEEEeCCccc-----cc-cC-CceEEccCCChHHHHHhhcCCCCEEEEeCC
Confidence            579999996 9999999999999987  89999987521     11 00 011111 1111234456777 999999986


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 018512          120 VPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  159 (354)
Q Consensus       120 ~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~t  159 (354)
                      ...   ....++...|+....++++.+++.....+|.+.|
T Consensus        73 ~~~---~~~~~~~~~n~~~~~~ll~a~~~~~~~~~v~~SS  109 (286)
T 3gpi_A           73 ASE---YSDEHYRLSYVEGLRNTLSALEGAPLQHVFFVSS  109 (286)
T ss_dssp             HHH---HC-----CCSHHHHHHHHHHTTTSCCCEEEEEEE
T ss_pred             CCC---CCHHHHHHHHHHHHHHHHHHHhhCCCCEEEEEcc
Confidence            431   1223445668999999999998765555554444

>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}

Probab=97.80  E-value=5.5e-05  Score=66.91  Aligned_cols=78  Identities=24%  Similarity=0.336  Sum_probs=55.8

Q ss_pred             CCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcCC
Q 018512           40 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG  119 (354)
Q Consensus        40 ~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~ag  119 (354)
                      ...|||+|||+ |.+|+.++..|...+.  +|.++|+++.                           ++++||+||++..
T Consensus        17 ~~~~~I~iiG~-G~mG~~la~~l~~~g~--~V~~~~~~~~---------------------------~~~~aD~vi~av~   66 (209)
T 2raf_A           17 FQGMEITIFGK-GNMGQAIGHNFEIAGH--EVTYYGSKDQ---------------------------ATTLGEIVIMAVP   66 (209)
T ss_dssp             ---CEEEEECC-SHHHHHHHHHHHHTTC--EEEEECTTCC---------------------------CSSCCSEEEECSC
T ss_pred             cCCCEEEEECC-CHHHHHHHHHHHHCCC--EEEEEcCCHH---------------------------HhccCCEEEEcCC
Confidence            34679999998 9999999999999887  8999998642                           4678999999852


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCC
Q 018512          120 VPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVN  163 (354)
Q Consensus       120 ~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv~  163 (354)
                       +               ..++++++.+..+.++.+++..+|+.+
T Consensus        67 -~---------------~~~~~v~~~l~~~~~~~~vi~~~~g~~   94 (209)
T 2raf_A           67 -Y---------------PALAALAKQYATQLKGKIVVDITNPLN   94 (209)
T ss_dssp             -H---------------HHHHHHHHHTHHHHTTSEEEECCCCBC
T ss_pred             -c---------------HHHHHHHHHHHHhcCCCEEEEECCCCC
Confidence             1               122344444443334778888899765

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}

Probab=97.79  E-value=0.00016  Score=66.41  Aligned_cols=164  Identities=16%  Similarity=0.214  Sum_probs=90.9

Q ss_pred             cchhhhhhhhcccCCCCCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC---chhHHHHHhcCCCCCeEEEEe-
Q 018512           24 QENSCLRQAKCRAKGGAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN---TPGVTADISHMDTGAVVRGFL-   99 (354)
Q Consensus        24 ~~~~~~~~~~~~~~~~~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~---~~g~~~dl~~~~~~~~v~~~~-   99 (354)
                      .+|.+|+...+..  +-+.+++.|+||+|.+|..++..|+..|.  .|++.|.+.   .+....++....  ..+..+. 
T Consensus        15 ~~~~~~~~mm~~~--~l~gk~~lVTGas~GIG~aia~~la~~G~--~V~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~   88 (271)
T 3v2g_A           15 TENLYFQSMMTSI--SLAGKTAFVTGGSRGIGAAIAKRLALEGA--AVALTYVNAAERAQAVVSEIEQAG--GRAVAIRA   88 (271)
T ss_dssp             -----CHHHHTTT--CCTTCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESSCHHHHHHHHHHHHHTT--CCEEEEEC
T ss_pred             ccccchhhhcccc--CCCCCEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEeCCCHHHHHHHHHHHHhcC--CcEEEEEC
Confidence            6777887543321  23445899999999999999999999998  899988765   222333444322  2222211 


Q ss_pred             CCCc---HHhhhC-------CCcEEEEcCCCCCCCC---CC---HHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecCCC
Q 018512          100 GQPQ---LENALT-------GMDLVIIPAGVPRKPG---MT---RDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPV  162 (354)
Q Consensus       100 ~~~d---~~~al~-------~aDvVIi~ag~~~~~g---~~---r~d~~~~n~~~~~~i~~~i~~~~-p~a~viv~tNPv  162 (354)
                      +-+|   .+++++       ..|++|+.||......   .+   ....+..|+.....+.+.+.+.- ..+.||+++...
T Consensus        89 Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~isS~~  168 (271)
T 3v2g_A           89 DNRDAEAIEQAIRETVEALGGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITIGSNL  168 (271)
T ss_dssp             CTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCGG
T ss_pred             CCCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEeChh
Confidence            1122   223333       7899999998754221   12   23445667777666666666553 356677765422


Q ss_pred             CCchHHHHHHHHHhCCCCCCCEEEeccchHHHHHHHHHHHhC
Q 018512          163 NSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEVLG  204 (354)
Q Consensus       163 ~~~~~~~~~~~~~~~~~p~~kviG~t~ld~~r~~~~la~~l~  204 (354)
                      ...           .++|..-.++.+......+.+.+|..++
T Consensus       169 ~~~-----------~~~~~~~~Y~asKaa~~~l~~~la~e~~  199 (271)
T 3v2g_A          169 AEL-----------VPWPGISLYSASKAALAGLTKGLARDLG  199 (271)
T ss_dssp             GTC-----------CCSTTCHHHHHHHHHHHHHHHHHHHHHG
T ss_pred             hcc-----------CCCCCchHHHHHHHHHHHHHHHHHHHhh
Confidence            111           1122222333433334456677777764

>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}

Probab=97.78  E-value=4.6e-05  Score=70.08  Aligned_cols=158  Identities=13%  Similarity=0.084  Sum_probs=90.1

Q ss_pred             CCCeEEEEcCCCchHHHHHHHHHhCCCC--cEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCC--CcEEEE
Q 018512           41 AGFKVAILGAAGGIGQPLAMLMKINPLV--SVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTG--MDLVII  116 (354)
Q Consensus        41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~--~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~--aDvVIi  116 (354)
                      ++|||.|+||+|++|++++..|+..+..  .+...+..     ...|+.            ...++.+++++  +|+||+
T Consensus         5 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~~~~~~~~~~-----~~~D~~------------d~~~~~~~~~~~~~d~Vih   67 (319)
T 4b8w_A            5 QSMRILVTGGSGLVGKAIQKVVADGAGLPGEDWVFVSS-----KDADLT------------DTAQTRALFEKVQPTHVIH   67 (319)
T ss_dssp             CCCEEEEETCSSHHHHHHHHHHHTTTCCTTCEEEECCT-----TTCCTT------------SHHHHHHHHHHSCCSEEEE
T ss_pred             cCCeEEEECCCcHHHHHHHHHHHhcCCcccccccccCc-----eecccC------------CHHHHHHHHhhcCCCEEEE
Confidence            4689999999999999999999988751  01110000     001111            11234566766  999999


Q ss_pred             cCCCCCC---CCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCC------CchHHHHHHHHHhCCCCCCC-EEE
Q 018512          117 PAGVPRK---PGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVN------STVPIAAEVFKKAGTYDPKK-LLG  186 (354)
Q Consensus       117 ~ag~~~~---~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv~------~~~~~~~~~~~~~~~~p~~k-viG  186 (354)
                      +|+....   ......+.+..|+....++++.+++.+.+.+|.+.|--+.      .++    |-........+.. .+|
T Consensus        68 ~A~~~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~v~~SS~~vyg~~~~~~~~----E~~~~~~~~~p~~~~Y~  143 (319)
T 4b8w_A           68 LAAMVGGLFRNIKYNLDFWRKNVHMNDNVLHSAFEVGARKVVSCLSTCIFPDKTTYPID----ETMIHNGPPHNSNFGYS  143 (319)
T ss_dssp             CCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCGGGSCSSCCSSBC----GGGGGBSCCCSSSHHHH
T ss_pred             CceecccccccccCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEEcchhhcCCCCCCCcc----ccccccCCCCCCcchHH
Confidence            9987431   1134456788999999999999998876554444432110      000    0000000111112 244


Q ss_pred             eccchHHHHHHHHHHHhCCCCCCCc-ceEEeecC
Q 018512          187 VTMLDVVRANTFVAEVLGLDPRDVD-VPVVGGHA  219 (354)
Q Consensus       187 ~t~ld~~r~~~~la~~l~v~~~~v~-~~v~G~hg  219 (354)
                      .+.....++-..+++..|++..-++ +.++|...
T Consensus       144 ~sK~~~E~~~~~~~~~~~~~~~ilRp~~v~Gp~~  177 (319)
T 4b8w_A          144 YAKRMIDVQNRAYFQQYGCTFTAVIPTNVFGPHD  177 (319)
T ss_dssp             HHHHHHHHHHHHHHHHHCCEEEEEEECEEECTTC
T ss_pred             HHHHHHHHHHHHHHHhhCCCEEEEeeccccCCCC
Confidence            4555555565666677777655554 46777543

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}

Probab=97.77  E-value=2.9e-05  Score=72.37  Aligned_cols=98  Identities=16%  Similarity=0.184  Sum_probs=62.2

Q ss_pred             CCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC-c---hhHHH---HHhcCCCCCeE-EE-EeCCCcHHhhhCC
Q 018512           40 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN-T---PGVTA---DISHMDTGAVV-RG-FLGQPQLENALTG  110 (354)
Q Consensus        40 ~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~-~---~g~~~---dl~~~~~~~~v-~~-~~~~~d~~~al~~  110 (354)
                      +.+|+|+|+||+|++|++++..|+..|.  +|++++++. .   .....   ++....  ..+ .. +....++.+++++
T Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g~--~V~~~~R~~~~~~~~~~~~~l~~~~~~~--v~~v~~D~~d~~~l~~a~~~   77 (321)
T 3c1o_A            2 SHMEKIIIYGGTGYIGKFMVRASLSFSH--PTFIYARPLTPDSTPSSVQLREEFRSMG--VTIIEGEMEEHEKMVSVLKQ   77 (321)
T ss_dssp             --CCCEEEETTTSTTHHHHHHHHHHTTC--CEEEEECCCCTTCCHHHHHHHHHHHHTT--CEEEECCTTCHHHHHHHHTT
T ss_pred             CcccEEEEEcCCchhHHHHHHHHHhCCC--cEEEEECCcccccChHHHHHHHHhhcCC--cEEEEecCCCHHHHHHHHcC
Confidence            3467899999999999999999999886  889999874 1   11111   222211  111 11 1111246788999


Q ss_pred             CcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCeE
Q 018512          111 MDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNAT  154 (354)
Q Consensus       111 aDvVIi~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~-p~a~  154 (354)
                      +|+||++++...             +...+++++.+++.+ .+.+
T Consensus        78 ~d~vi~~a~~~~-------------~~~~~~l~~aa~~~g~v~~~  109 (321)
T 3c1o_A           78 VDIVISALPFPM-------------ISSQIHIINAIKAAGNIKRF  109 (321)
T ss_dssp             CSEEEECCCGGG-------------SGGGHHHHHHHHHHCCCCEE
T ss_pred             CCEEEECCCccc-------------hhhHHHHHHHHHHhCCccEE
Confidence            999999987532             233456677777665 4443

>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}

Probab=97.77  E-value=7.2e-05  Score=69.25  Aligned_cols=97  Identities=11%  Similarity=0.160  Sum_probs=64.1

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCC-CcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcCCC
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPL-VSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGV  120 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~-~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~ag~  120 (354)
                      .|||+|||+ |++|.+++..|...++ ..+|+++|+++..  ..++....   .+..   +.+..+++++||+||++.. 
T Consensus         3 ~~~I~iIG~-G~mG~aia~~l~~~g~~~~~V~v~dr~~~~--~~~l~~~~---gi~~---~~~~~~~~~~aDvVilav~-   72 (280)
T 3tri_A            3 TSNITFIGG-GNMARNIVVGLIANGYDPNRICVTNRSLDK--LDFFKEKC---GVHT---TQDNRQGALNADVVVLAVK-   72 (280)
T ss_dssp             CSCEEEESC-SHHHHHHHHHHHHTTCCGGGEEEECSSSHH--HHHHHHTT---CCEE---ESCHHHHHSSCSEEEECSC-
T ss_pred             CCEEEEEcc-cHHHHHHHHHHHHCCCCCCeEEEEeCCHHH--HHHHHHHc---CCEE---eCChHHHHhcCCeEEEEeC-
Confidence            579999999 9999999999998885 4579999998622  12222211   1222   2356788999999999851 


Q ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHHHhhh--CCCeEEEEecCCCC
Q 018512          121 PRKPGMTRDDLFNINAGIVRTLCEGIAKC--CPNATVNLISNPVN  163 (354)
Q Consensus       121 ~~~~g~~r~d~~~~n~~~~~~i~~~i~~~--~p~a~viv~tNPv~  163 (354)
                      |               ..+.++++.+..+  .++.+|+..++.+.
T Consensus        73 p---------------~~~~~vl~~l~~~~l~~~~iiiS~~agi~  102 (280)
T 3tri_A           73 P---------------HQIKMVCEELKDILSETKILVISLAVGVT  102 (280)
T ss_dssp             G---------------GGHHHHHHHHHHHHHTTTCEEEECCTTCC
T ss_pred             H---------------HHHHHHHHHHHhhccCCCeEEEEecCCCC
Confidence            1               1234455555554  35666665556554

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*

Probab=97.77  E-value=4.5e-05  Score=68.53  Aligned_cols=115  Identities=17%  Similarity=0.196  Sum_probs=69.5

Q ss_pred             CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCCCCeEEEEe-CCCc---HHhhhC-----
Q 018512           41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQ---LENALT-----  109 (354)
Q Consensus        41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~~~~v~~~~-~~~d---~~~al~-----  109 (354)
                      +.++|.|+||+|.+|..++..|+..|.  +|+++|++.  ......++....  ..+..+. +-.|   ++++++     
T Consensus        10 ~~~~vlVtGasggiG~~la~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~   85 (255)
T 1fmc_A           10 DGKCAIITGAGAGIGKEIAITFATAGA--SVVVSDINADAANHVVDEIQQLG--GQAFACRCDITSEQELSALADFAISK   85 (255)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHTTTC--EEEEEESCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCC--EEEEEcCCHHHHHHHHHHHHHhC--CceEEEEcCCCCHHHHHHHHHHHHHh
Confidence            446899999999999999999999987  899999975  222233343222  1222221 1122   233333     


Q ss_pred             --CCcEEEEcCCCCCCC--CCC---HHHHHHHHHHHHHHHHHHH----hhhCCCeEEEEecC
Q 018512          110 --GMDLVIIPAGVPRKP--GMT---RDDLFNINAGIVRTLCEGI----AKCCPNATVNLISN  160 (354)
Q Consensus       110 --~aDvVIi~ag~~~~~--g~~---r~d~~~~n~~~~~~i~~~i----~~~~p~a~viv~tN  160 (354)
                        +.|+||++||.....  ..+   ....+..|+.....+.+.+    ++.. .+.|+++|.
T Consensus        86 ~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~~~iv~~sS  146 (255)
T 1fmc_A           86 LGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNG-GGVILTITS  146 (255)
T ss_dssp             HSSCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECC
T ss_pred             cCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEcc
Confidence              899999999864321  222   2344566766655555544    3333 456666653

>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A

Probab=97.76  E-value=5e-05  Score=75.48  Aligned_cols=117  Identities=17%  Similarity=0.165  Sum_probs=71.2

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCC---------------CCeEEEEeCCCcHHh
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDT---------------GAVVRGFLGQPQLEN  106 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~---------------~~~v~~~~~~~d~~~  106 (354)
                      +|||+|||+ |.||..++..|+..+...+|+++|+++.+  +..+.....               ...++.   ++++.+
T Consensus         5 ~mkI~VIG~-G~mG~~lA~~La~~g~G~~V~~~d~~~~~--~~~l~~g~~~i~e~~l~~~~~~~~~~~~~~---t~~~~e   78 (467)
T 2q3e_A            5 IKKICCIGA-GYVGGPTCSVIAHMCPEIRVTVVDVNESR--INAWNSPTLPIYEPGLKEVVESCRGKNLFF---STNIDD   78 (467)
T ss_dssp             CCEEEEECC-STTHHHHHHHHHHHCTTSEEEEECSCHHH--HHHHTSSSCSSCCTTHHHHHHHHBTTTEEE---ESCHHH
T ss_pred             ccEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEECCHHH--HHHHhCCCCCcCCCCHHHHHHHhhcCCEEE---ECCHHH
Confidence            479999999 99999999999987322399999997521  122221100               012333   356778


Q ss_pred             hhCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEe-cCCCCCc
Q 018512          107 ALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLI-SNPVNST  165 (354)
Q Consensus       107 al~~aDvVIi~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~-p~a~viv~-tNPv~~~  165 (354)
                      ++++||+||++.+.|........+ -..++..+.+.++.+.++. ++.+|+.. |+|.+..
T Consensus        79 ~~~~aDvViiaVptp~~~~~v~~~-~~~dl~~v~~~~~~i~~~l~~g~iVV~~STv~~g~~  138 (467)
T 2q3e_A           79 AIKEADLVFISVNTPTKTYGMGKG-RAADLKYIEACARRIVQNSNGYKIVTEKSTVPVRAA  138 (467)
T ss_dssp             HHHHCSEEEECCCCCBCCSSTTTT-TSBCCHHHHHHHHHHHHTCCSEEEEEECSCCCTTHH
T ss_pred             HHhcCCEEEEEcCCchhhcccccc-CCCcHHHHHHHHHHHHhhCCCCCEEEECCcCCchHH
Confidence            899999999998766532211000 0112334556666666654 45555554 5777654

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*

Probab=97.76  E-value=6e-05  Score=68.22  Aligned_cols=115  Identities=16%  Similarity=0.120  Sum_probs=73.8

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHh-CCCCcEEEEEecCC--chhHHHHHhcCCCCCeEEEE-eCCCc---HHhhhC-----
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKI-NPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGF-LGQPQ---LENALT-----  109 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~-~~~~~ei~L~D~~~--~~g~~~dl~~~~~~~~v~~~-~~~~d---~~~al~-----  109 (354)
                      .++|.|+||+|++|++++..|+. .|.  +|++++++.  ......++.....  .+..+ .+-+|   +.++++     
T Consensus         4 ~k~vlITGasggIG~~~a~~L~~~~g~--~V~~~~r~~~~~~~~~~~l~~~~~--~~~~~~~Dl~~~~~~~~~~~~~~~~   79 (276)
T 1wma_A            4 IHVALVTGGNKGIGLAIVRDLCRLFSG--DVVLTARDVTRGQAAVQQLQAEGL--SPRFHQLDIDDLQSIRALRDFLRKE   79 (276)
T ss_dssp             CCEEEESSCSSHHHHHHHHHHHHHSSS--EEEEEESSHHHHHHHHHHHHHTTC--CCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHhcCC--eEEEEeCChHHHHHHHHHHHhcCC--eeEEEECCCCCHHHHHHHHHHHHHh
Confidence            45899999999999999999998 887  899999875  2223334433221  12211 11122   233333     


Q ss_pred             --CCcEEEEcCCCCCCCC--CC----HHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecC
Q 018512          110 --GMDLVIIPAGVPRKPG--MT----RDDLFNINAGIVRTLCEGIAKCC-PNATVNLISN  160 (354)
Q Consensus       110 --~aDvVIi~ag~~~~~g--~~----r~d~~~~n~~~~~~i~~~i~~~~-p~a~viv~tN  160 (354)
                        +.|+||++||......  ..    ....+..|+.....+.+.+.++. +.+.||++|.
T Consensus        80 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~~sS  139 (276)
T 1wma_A           80 YGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSS  139 (276)
T ss_dssp             HSSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECC
T ss_pred             cCCCCEEEECCcccccCCCccccHHHHHhhhheeeeeHHHHHHHHHHhhCCCCEEEEECC
Confidence              8999999998653221  11    23456778888888888887664 3456666654

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*

Probab=97.75  E-value=3.1e-05  Score=73.19  Aligned_cols=96  Identities=20%  Similarity=0.163  Sum_probs=64.8

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHH---HHHhcCCCCCeE-EE-EeCCCcHHhhhC--CCc
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVT---ADISHMDTGAVV-RG-FLGQPQLENALT--GMD  112 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~---~dl~~~~~~~~v-~~-~~~~~d~~~al~--~aD  112 (354)
                      ++||+|+||+|++|++++..|+..|.  +|++++++.  .....   .++....  ..+ .. +....++.++++  ++|
T Consensus        10 ~~~IlVtGatG~iG~~l~~~L~~~g~--~V~~l~R~~~~~~~~~~~~~~l~~~~--v~~~~~Dl~d~~~l~~~~~~~~~d   85 (346)
T 3i6i_A           10 KGRVLIAGATGFIGQFVATASLDAHR--PTYILARPGPRSPSKAKIFKALEDKG--AIIVYGLINEQEAMEKILKEHEID   85 (346)
T ss_dssp             -CCEEEECTTSHHHHHHHHHHHHTTC--CEEEEECSSCCCHHHHHHHHHHHHTT--CEEEECCTTCHHHHHHHHHHTTCC
T ss_pred             CCeEEEECCCcHHHHHHHHHHHHCCC--CEEEEECCCCCChhHHHHHHHHHhCC--cEEEEeecCCHHHHHHHHhhCCCC
Confidence            46899999999999999999999886  899999875  11111   1232221  111 11 111134567788  999


Q ss_pred             EEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCeE
Q 018512          113 LVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNAT  154 (354)
Q Consensus       113 vVIi~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~-p~a~  154 (354)
                      +||++++..             |+...+++++.+++.+ .+-+
T Consensus        86 ~Vi~~a~~~-------------n~~~~~~l~~aa~~~g~v~~~  115 (346)
T 3i6i_A           86 IVVSTVGGE-------------SILDQIALVKAMKAVGTIKRF  115 (346)
T ss_dssp             EEEECCCGG-------------GGGGHHHHHHHHHHHCCCSEE
T ss_pred             EEEECCchh-------------hHHHHHHHHHHHHHcCCceEE
Confidence            999998752             6666778888888887 4443

>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}

Probab=97.74  E-value=6.2e-05  Score=69.62  Aligned_cols=65  Identities=8%  Similarity=0.142  Sum_probs=49.2

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcC
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA  118 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~a  118 (354)
                      .|||+|||+ |.+|..++..|...|+  +|+++|+++...  ..+.+..    +..   .+++++++++||+||++.
T Consensus         1 s~~i~iIG~-G~mG~~~a~~l~~~G~--~V~~~dr~~~~~--~~~~~~g----~~~---~~~~~~~~~~aDvvi~~v   65 (287)
T 3pef_A            1 SQKFGFIGL-GIMGSAMAKNLVKAGC--SVTIWNRSPEKA--EELAALG----AER---AATPCEVVESCPVTFAML   65 (287)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTC--EEEEECSSGGGG--HHHHHTT----CEE---CSSHHHHHHHCSEEEECC
T ss_pred             CCEEEEEee-cHHHHHHHHHHHHCCC--eEEEEcCCHHHH--HHHHHCC----Cee---cCCHHHHHhcCCEEEEEc
Confidence            379999999 9999999999999997  999999986321  1122221    222   346788899999999984

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}

Probab=97.73  E-value=0.0001  Score=65.94  Aligned_cols=116  Identities=17%  Similarity=0.217  Sum_probs=64.1

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEE-ecCCc--hhHHHHHhcCCCCCeEEEEe-CCCc---HHhhhC-----
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLY-DVVNT--PGVTADISHMDTGAVVRGFL-GQPQ---LENALT-----  109 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~-D~~~~--~g~~~dl~~~~~~~~v~~~~-~~~d---~~~al~-----  109 (354)
                      .++|.|+||+|.+|.+++..|+..|.  +|+++ ++++.  .....++....  ..+..+. +-+|   ++++++     
T Consensus         5 ~~~vlItGasggiG~~~a~~l~~~G~--~V~~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~   80 (247)
T 2hq1_A            5 GKTAIVTGSSRGLGKAIAWKLGNMGA--NIVLNGSPASTSLDATAEEFKAAG--INVVVAKGDVKNPEDVENMVKTAMDA   80 (247)
T ss_dssp             TCEEEESSCSSHHHHHHHHHHHHTTC--EEEEEECTTCSHHHHHHHHHHHTT--CCEEEEESCTTSHHHHHHHHHHHHHH
T ss_pred             CcEEEEECCCchHHHHHHHHHHHCCC--EEEEEcCcCHHHHHHHHHHHHhcC--CcEEEEECCCCCHHHHHHHHHHHHHh
Confidence            45899999999999999999999997  88988 44442  22223333222  2222221 1122   223333     


Q ss_pred             --CCcEEEEcCCCCCCC------CCCHHHHHHHHHHHHHHHHHHHhhh---CCCeEEEEecCC
Q 018512          110 --GMDLVIIPAGVPRKP------GMTRDDLFNINAGIVRTLCEGIAKC---CPNATVNLISNP  161 (354)
Q Consensus       110 --~aDvVIi~ag~~~~~------g~~r~d~~~~n~~~~~~i~~~i~~~---~p~a~viv~tNP  161 (354)
                        +.|+||+.||.....      .......+..|+.....+.+.+.++   ...+.|+++|..
T Consensus        81 ~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~  143 (247)
T 2hq1_A           81 FGRIDILVNNAGITRDTLMLKMSEKDWDDVLNTNLKSAYLCTKAVSKIMLKQKSGKIINITSI  143 (247)
T ss_dssp             HSCCCEEEECC---------------CHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECC-
T ss_pred             cCCCCEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCh
Confidence              899999999865321      1123345666776654444444332   134667776643

>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*

Probab=97.73  E-value=2.7e-05  Score=74.43  Aligned_cols=115  Identities=15%  Similarity=-0.010  Sum_probs=71.0

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCC-----CC-eEEEEeC-CC---cHHhhhCC--
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDT-----GA-VVRGFLG-QP---QLENALTG--  110 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~-----~~-~v~~~~~-~~---d~~~al~~--  110 (354)
                      ++|.|+||+|++|++++..|+..|.  +|+++|++........+.....     .. .+..+.. -.   ++.+++++  
T Consensus        29 k~vlVtGatG~IG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~  106 (381)
T 1n7h_A           29 KIALITGITGQDGSYLTEFLLGKGY--EVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVIK  106 (381)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC--EEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHHC
T ss_pred             CeEEEEcCCchHHHHHHHHHHHCCC--EEEEEecCCccccchhhhhhhhccccccccceEEEECCCCCHHHHHHHHHhcC
Confidence            4899999999999999999999887  8999998652100000111100     01 2333211 12   23456665  


Q ss_pred             CcEEEEcCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHhhhCC----CeEEEEec
Q 018512          111 MDLVIIPAGVPRKP--GMTRDDLFNINAGIVRTLCEGIAKCCP----NATVNLIS  159 (354)
Q Consensus       111 aDvVIi~ag~~~~~--g~~r~d~~~~n~~~~~~i~~~i~~~~p----~a~viv~t  159 (354)
                      .|+||++|+.....  .......+..|+.....+++.+.+...    .+.||++|
T Consensus       107 ~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~~~~~~v~~S  161 (381)
T 1n7h_A          107 PDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAG  161 (381)
T ss_dssp             CSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEE
T ss_pred             CCEEEECCcccCccccccCHHHHHHHHHHHHHHHHHHHHHhCCccCCccEEEEeC
Confidence            59999999864311  012345567788888899888887652    34555554

>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2

Probab=97.72  E-value=8.9e-05  Score=77.06  Aligned_cols=117  Identities=19%  Similarity=0.068  Sum_probs=74.7

Q ss_pred             CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcC-CCCCe-EEE-EeCCCcHHhhhC--CCcE
Q 018512           41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHM-DTGAV-VRG-FLGQPQLENALT--GMDL  113 (354)
Q Consensus        41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~-~~~~~-v~~-~~~~~d~~~al~--~aDv  113 (354)
                      +.++|+|+||+|++|++++..|+..|.  +|+++|+..  ......++... ..... +.. +....++.++++  ++|+
T Consensus        10 ~~~~ilVTGatG~IG~~l~~~L~~~G~--~V~~~~r~~~~~~~~~~~l~~~~~~~v~~v~~Dl~d~~~l~~~~~~~~~D~   87 (699)
T 1z45_A           10 TSKIVLVTGGAGYIGSHTVVELIENGY--DCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDRKGLEKVFKEYKIDS   87 (699)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTTCHHHHHHHHHHSCCCE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCcC--EEEEEECCCcchHHHHHHHhhccCCceEEEEcCCCCHHHHHHHHHhCCCCE
Confidence            357999999999999999999999887  899999865  11111222111 00111 111 111123445666  8999


Q ss_pred             EEEcCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 018512          114 VIIPAGVPRKP--GMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  159 (354)
Q Consensus       114 VIi~ag~~~~~--g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~t  159 (354)
                      ||++|+.....  .....+.+..|+.....+++.+++.....+|.+.|
T Consensus        88 Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~~iV~~SS  135 (699)
T 1z45_A           88 VIHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYNVSKFVFSSS  135 (699)
T ss_dssp             EEECCSCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEE
T ss_pred             EEECCcccCcCccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECc
Confidence            99999864311  01234567889999999999998876555555444

>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*

Probab=97.71  E-value=7.6e-05  Score=70.40  Aligned_cols=119  Identities=13%  Similarity=0.173  Sum_probs=73.4

Q ss_pred             CCCeEEEEcCCCchHHHHHHHHHhCCC--CcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcC
Q 018512           41 AGFKVAILGAAGGIGQPLAMLMKINPL--VSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA  118 (354)
Q Consensus        41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~--~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~a  118 (354)
                      ..|||+|||+ |.+|..++..|...|.  ..+|+++|+++.......+....    +...   .+..+++++||+||++.
T Consensus        21 ~~mkI~iIG~-G~mG~ala~~L~~~G~~~~~~V~v~~r~~~~~~~~~l~~~G----~~~~---~~~~e~~~~aDvVilav   92 (322)
T 2izz_A           21 QSMSVGFIGA-GQLAFALAKGFTAAGVLAAHKIMASSPDMDLATVSALRKMG----VKLT---PHNKETVQHSDVLFLAV   92 (322)
T ss_dssp             -CCCEEEESC-SHHHHHHHHHHHHTTSSCGGGEEEECSCTTSHHHHHHHHHT----CEEE---SCHHHHHHHCSEEEECS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCCCcceEEEECCCccHHHHHHHHHcC----CEEe---CChHHHhccCCEEEEEe
Confidence            3479999999 9999999999998883  13899999875311222232211    2221   34567889999999985


Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecCCCCCchHHHHHHHHHhCCCCCCCEEEe
Q 018512          119 GVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV  187 (354)
Q Consensus       119 g~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~-p~a~viv~tNPv~~~~~~~~~~~~~~~~~p~~kviG~  187 (354)
                      . +               ..+.++++.+.... |+.+|+.++|.+..- .+ .+.+.+  .++..++++.
T Consensus        93 ~-~---------------~~~~~vl~~l~~~l~~~~ivvs~s~gi~~~-~l-~~~l~~--~~~~~~vv~~  142 (322)
T 2izz_A           93 K-P---------------HIIPFILDEIGADIEDRHIVVSCAAGVTIS-SI-EKKLSA--FRPAPRVIRC  142 (322)
T ss_dssp             C-G---------------GGHHHHHHHHGGGCCTTCEEEECCTTCCHH-HH-HHHHHT--TSSCCEEEEE
T ss_pred             C-H---------------HHHHHHHHHHHhhcCCCCEEEEeCCCCCHH-HH-HHHHhh--cCCCCeEEEE
Confidence            3 1               12344555566554 677777778877632 21 233332  1344567665

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2

Probab=97.71  E-value=0.00014  Score=64.97  Aligned_cols=115  Identities=18%  Similarity=0.176  Sum_probs=67.2

Q ss_pred             CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCC---cHHhhhC---CCcEE
Q 018512           41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQP---QLENALT---GMDLV  114 (354)
Q Consensus        41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~---d~~~al~---~aDvV  114 (354)
                      +.++|.|+||+|++|++++..|+..|.  +|+++|++....... ..+.. ....... +-.   +++++++   ..|+|
T Consensus         6 ~~~~vlVTGasggiG~~~a~~l~~~G~--~V~~~~r~~~~~~~~-~~~~~-~~~~~~~-D~~~~~~~~~~~~~~~~id~v   80 (244)
T 1cyd_A            6 SGLRALVTGAGKGIGRDTVKALHASGA--KVVAVTRTNSDLVSL-AKECP-GIEPVCV-DLGDWDATEKALGGIGPVDLL   80 (244)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHH-HHHST-TCEEEEC-CTTCHHHHHHHHTTCCCCSEE
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC--EEEEEeCCHHHHHHH-HHhcc-CCCcEEe-cCCCHHHHHHHHHHcCCCCEE
Confidence            456899999999999999999999987  899999875211111 11111 1111111 112   2334444   47999


Q ss_pred             EEcCCCCCCC---CCC---HHHHHHHHHHHHHHHHHHH----hhhCCCeEEEEecC
Q 018512          115 IIPAGVPRKP---GMT---RDDLFNINAGIVRTLCEGI----AKCCPNATVNLISN  160 (354)
Q Consensus       115 Ii~ag~~~~~---g~~---r~d~~~~n~~~~~~i~~~i----~~~~p~a~viv~tN  160 (354)
                      |++||.....   ..+   ....+..|+.....+.+.+    .+....+.||++|.
T Consensus        81 i~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~iv~~sS  136 (244)
T 1cyd_A           81 VNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSS  136 (244)
T ss_dssp             EECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECC
T ss_pred             EECCcccCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEEcc
Confidence            9999865321   112   2334566766655555444    43343566666654

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}

Probab=97.71  E-value=0.00017  Score=64.32  Aligned_cols=99  Identities=16%  Similarity=0.164  Sum_probs=63.4

Q ss_pred             CCCCeEEEEcCCCchHHHHHHHHHhCC-CCcEEEEEecCCchhHHHHHhcCCCCCeEEEEe----CCCcHHhhhCCCcEE
Q 018512           40 AAGFKVAILGAAGGIGQPLAMLMKINP-LVSVLHLYDVVNTPGVTADISHMDTGAVVRGFL----GQPQLENALTGMDLV  114 (354)
Q Consensus        40 ~~~~kI~IiGa~G~vG~~~a~~l~~~~-~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~----~~~d~~~al~~aDvV  114 (354)
                      ..+++|.|+||+|++|+.++..|+..| .  +|+++++++..     +.... ...+..+.    ...++.++++++|+|
T Consensus        21 ~~mk~vlVtGatG~iG~~l~~~L~~~G~~--~V~~~~R~~~~-----~~~~~-~~~~~~~~~Dl~d~~~~~~~~~~~D~v   92 (236)
T 3qvo_A           21 GHMKNVLILGAGGQIARHVINQLADKQTI--KQTLFARQPAK-----IHKPY-PTNSQIIMGDVLNHAALKQAMQGQDIV   92 (236)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHTTCTTE--EEEEEESSGGG-----SCSSC-CTTEEEEECCTTCHHHHHHHHTTCSEE
T ss_pred             CcccEEEEEeCCcHHHHHHHHHHHhCCCc--eEEEEEcChhh-----hcccc-cCCcEEEEecCCCHHHHHHHhcCCCEE
Confidence            335689999999999999999999888 6  89999987521     11111 11222221    112456788999999


Q ss_pred             EEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 018512          115 IIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  159 (354)
Q Consensus       115 Ii~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~t  159 (354)
                      |++++..      ..+      ...+.+++.+++..... ||++|
T Consensus        93 v~~a~~~------~~~------~~~~~~~~~~~~~~~~~-iV~iS  124 (236)
T 3qvo_A           93 YANLTGE------DLD------IQANSVIAAMKACDVKR-LIFVL  124 (236)
T ss_dssp             EEECCST------THH------HHHHHHHHHHHHTTCCE-EEEEC
T ss_pred             EEcCCCC------chh------HHHHHHHHHHHHcCCCE-EEEEe
Confidence            9988642      111      12456777777765444 44444

>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}

Probab=97.70  E-value=0.00011  Score=70.77  Aligned_cols=101  Identities=13%  Similarity=0.153  Sum_probs=67.2

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCC-------CCcEEEEEecCCc-----hhHHHHHhcC--CC------CCeEEEEeCC
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINP-------LVSVLHLYDVVNT-----PGVTADISHM--DT------GAVVRGFLGQ  101 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~-------~~~ei~L~D~~~~-----~g~~~dl~~~--~~------~~~v~~~~~~  101 (354)
                      +|||+|||+ |.+|+.++..|+..|       .  +|.++|+++.     ......-.+.  ..      ...+..   +
T Consensus        21 ~~kI~iIGa-G~mG~alA~~L~~~G~~~~~~~~--~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~---~   94 (375)
T 1yj8_A           21 PLKISILGS-GNWASAISKVVGTNAKNNYLFEN--EVRMWIRDEFVNGERMVDIINNKHENTKYLKGVPLPHNIVA---H   94 (375)
T ss_dssp             CBCEEEECC-SHHHHHHHHHHHHHHHHCTTBCS--CEEEECCSCC---CCHHHHHHHHCBCTTTSTTCBCCTTEEE---E
T ss_pred             CCEEEEECc-CHHHHHHHHHHHHcCCccCCCCC--eEEEEECChhhhhHHHHHHHHhcCcccccCCcccCcCCeEE---E
Confidence            368999999 999999999998877       5  8999998763     2222211110  00      112443   2


Q ss_pred             CcHHhhhCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhh----hC-CCeEEEEecCCCCC
Q 018512          102 PQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAK----CC-PNATVNLISNPVNS  164 (354)
Q Consensus       102 ~d~~~al~~aDvVIi~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~----~~-p~a~viv~tNPv~~  164 (354)
                      ++..+++++||+||++...                ..+.++++.+..    +. |+.+|+..+|.++.
T Consensus        95 ~~~~ea~~~aDvVilav~~----------------~~~~~vl~~i~~~~~~~l~~~~ivvs~~~Gi~~  146 (375)
T 1yj8_A           95 SDLASVINDADLLIFIVPC----------------QYLESVLASIKESESIKIASHAKAISLTKGFIV  146 (375)
T ss_dssp             SSTHHHHTTCSEEEECCCH----------------HHHHHHHHHHTC---CCCCTTCEEEECCCSCEE
T ss_pred             CCHHHHHcCCCEEEEcCCH----------------HHHHHHHHHHhhhhhccCCCCCEEEEeCCcccc
Confidence            4567889999999998420                245666777775    44 57788877876543

>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=97.70  E-value=6.4e-05  Score=71.68  Aligned_cols=115  Identities=11%  Similarity=0.008  Sum_probs=71.4

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCch---hHHHHHhcCC---CCCeEEEEeC-CC---cHHhhhCC--
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP---GVTADISHMD---TGAVVRGFLG-QP---QLENALTG--  110 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~---g~~~dl~~~~---~~~~v~~~~~-~~---d~~~al~~--  110 (354)
                      ++|.|+||+|++|++++..|+..|.  +|+++|++...   ....++....   ....+..+.. -.   ++.+++++  
T Consensus        25 ~~vlVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~  102 (375)
T 1t2a_A           25 NVALITGITGQDGSYLAEFLLEKGY--EVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEVK  102 (375)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC--EEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHHC
T ss_pred             cEEEEECCCchHHHHHHHHHHHCCC--EEEEEECCccccchhhHHHHhhhhccccCCCceEEEccCCCHHHHHHHHHhcC
Confidence            5899999999999999999999887  99999987521   1111111000   0112332211 12   23455665  


Q ss_pred             CcEEEEcCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHhhhCCC--eEEEEec
Q 018512          111 MDLVIIPAGVPRKP--GMTRDDLFNINAGIVRTLCEGIAKCCPN--ATVNLIS  159 (354)
Q Consensus       111 aDvVIi~ag~~~~~--g~~r~d~~~~n~~~~~~i~~~i~~~~p~--a~viv~t  159 (354)
                      .|+||++|+.....  .....+.+..|+.....+++.+.+...+  ..||++|
T Consensus       103 ~d~vih~A~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~~~~iv~~S  155 (375)
T 1t2a_A          103 PTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQAS  155 (375)
T ss_dssp             CSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEE
T ss_pred             CCEEEECCCcccccccccCHHHHHHHHHHHHHHHHHHHHHhCCCccceEEEec
Confidence            59999999864311  0123456678999999999999887641  4455544

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0

Probab=97.70  E-value=0.00038  Score=63.89  Aligned_cols=169  Identities=15%  Similarity=0.127  Sum_probs=84.2

Q ss_pred             ccCCCcccchhhhhhhhcccCCCCCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC-chhHHHHHhcCCCCCeE
Q 018512           17 HLYPPNLQENSCLRQAKCRAKGGAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN-TPGVTADISHMDTGAVV   95 (354)
Q Consensus        17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~-~~g~~~dl~~~~~~~~v   95 (354)
                      |+|+|-=..+.+|+..+..  .+-+.+++.|+||+|.+|..++..|+..|.  +|++.|+++ ......++....  ..+
T Consensus         8 ~~~~~~~~~~~~~~~m~~~--~~l~gk~~lVTGas~GIG~aia~~la~~G~--~V~~~~r~~~~~~~~~~~~~~~--~~~   81 (273)
T 3uf0_A            8 SSGVDLGTENLYFQSMTGP--FSLAGRTAVVTGAGSGIGRAIAHGYARAGA--HVLAWGRTDGVKEVADEIADGG--GSA   81 (273)
T ss_dssp             -----------------CT--TCCTTCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESSTHHHHHHHHHHTTT--CEE
T ss_pred             cccccccccccchhhcccc--cCCCCCEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEcCHHHHHHHHHHHHhcC--CcE
Confidence            3444444556666654322  233456899999999999999999999998  899999654 333334444332  233


Q ss_pred             EEEe-CCCcHH---h------hhCCCcEEEEcCCCCCCCC---CCH---HHHHHHHHHHHHHH----HHHHhhhCCCeEE
Q 018512           96 RGFL-GQPQLE---N------ALTGMDLVIIPAGVPRKPG---MTR---DDLFNINAGIVRTL----CEGIAKCCPNATV  155 (354)
Q Consensus        96 ~~~~-~~~d~~---~------al~~aDvVIi~ag~~~~~g---~~r---~d~~~~n~~~~~~i----~~~i~~~~p~a~v  155 (354)
                      ..+. +-+|.+   +      .+...|++|+.||......   .+.   ...+..|+.....+    .+.+++.. .+.|
T Consensus        82 ~~~~~Dv~d~~~v~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~I  160 (273)
T 3uf0_A           82 EAVVADLADLEGAANVAEELAATRRVDVLVNNAGIIARAPAEEVSLGRWREVLTVNLDAAWVLSRSFGTAMLAHG-SGRI  160 (273)
T ss_dssp             EEEECCTTCHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEE
T ss_pred             EEEEecCCCHHHHHHHHHHHHhcCCCcEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCEE
Confidence            3321 112321   1      1237899999998754221   122   23455565554444    44445443 4666


Q ss_pred             EEecCCCCCchHHHHHHHHHhCCCCCCCEEEeccchHHHHHHHHHHHhC
Q 018512          156 NLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEVLG  204 (354)
Q Consensus       156 iv~tNPv~~~~~~~~~~~~~~~~~p~~kviG~t~ld~~r~~~~la~~l~  204 (354)
                      |++|......            +.|..-.++.+......+.+.+|..++
T Consensus       161 V~isS~~~~~------------~~~~~~~Y~asKaa~~~l~~~la~e~~  197 (273)
T 3uf0_A          161 VTIASMLSFQ------------GGRNVAAYAASKHAVVGLTRALASEWA  197 (273)
T ss_dssp             EEECCGGGTS------------CCSSCHHHHHHHHHHHHHHHHHHHHHG
T ss_pred             EEEcchHhcC------------CCCCChhHHHHHHHHHHHHHHHHHHHh
Confidence            6665322111            222222333333334456677777763

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}

Probab=97.70  E-value=0.00017  Score=64.93  Aligned_cols=115  Identities=16%  Similarity=0.196  Sum_probs=69.1

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc--hhHHHHHhcCCCCCeEEEEe-CCCc---HHhhhC------
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFL-GQPQ---LENALT------  109 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~--~g~~~dl~~~~~~~~v~~~~-~~~d---~~~al~------  109 (354)
                      .++|.|+||+|.+|.+++..|+..|.  +|+++|++..  .....++....  ..+..+. +-+|   ++++++      
T Consensus        13 ~k~vlItGasggiG~~la~~l~~~G~--~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (260)
T 3awd_A           13 NRVAIVTGGAQNIGLACVTALAEAGA--RVIIADLDEAMATKAVEDLRMEG--HDVSSVVMDVTNTESVQNAVRSVHEQE   88 (260)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcC--CceEEEEecCCCHHHHHHHHHHHHHHc
Confidence            45899999999999999999999987  8999998752  22233343222  1222221 1122   233333      


Q ss_pred             -CCcEEEEcCCCCCCC----CCCH---HHHHHHHHHHHHHHHHHHhhh---CCCeEEEEecC
Q 018512          110 -GMDLVIIPAGVPRKP----GMTR---DDLFNINAGIVRTLCEGIAKC---CPNATVNLISN  160 (354)
Q Consensus       110 -~aDvVIi~ag~~~~~----g~~r---~d~~~~n~~~~~~i~~~i~~~---~p~a~viv~tN  160 (354)
                       +.|+||++||.....    ..+.   ...+..|+.....+.+.+.++   ...+.|+++|.
T Consensus        89 ~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS  150 (260)
T 3awd_A           89 GRVDILVACAGICISEVKAEDMTDGQWLKQVDINLNGMFRSCQAVGRIMLEQKQGVIVAIGS  150 (260)
T ss_dssp             SCCCEEEECCCCCCCSCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECC
T ss_pred             CCCCEEEECCCCCCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEec
Confidence             789999999865311    1222   334566766665555554432   13466666654

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2

Probab=97.69  E-value=5.4e-05  Score=70.13  Aligned_cols=100  Identities=16%  Similarity=0.055  Sum_probs=64.8

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc---hhHHH---HHhcCCCCCeE-EE-EeCCCcHHhhhCCCcE
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT---PGVTA---DISHMDTGAVV-RG-FLGQPQLENALTGMDL  113 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~---~g~~~---dl~~~~~~~~v-~~-~~~~~d~~~al~~aDv  113 (354)
                      ++||+|+||+|++|++++..|+..|.  +|++++++..   .....   ++....  ..+ .. +....++.++++++|+
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~--~V~~~~R~~~~~~~~~~~~~~~~~~~~--~~~~~~D~~d~~~l~~~~~~~d~   79 (313)
T 1qyd_A            4 KSRVLIVGGTGYIGKRIVNASISLGH--PTYVLFRPEVVSNIDKVQMLLYFKQLG--AKLIEASLDDHQRLVDALKQVDV   79 (313)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTC--CEEEECCSCCSSCHHHHHHHHHHHTTT--CEEECCCSSCHHHHHHHHTTCSE
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCC--cEEEEECCCcccchhHHHHHHHHHhCC--eEEEeCCCCCHHHHHHHHhCCCE
Confidence            46899999999999999999999886  8999998741   11211   222211  111 11 1111246688999999


Q ss_pred             EEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCeE
Q 018512          114 VIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNAT  154 (354)
Q Consensus       114 VIi~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~-p~a~  154 (354)
                      ||++++.....         .|+...+++++.+++.+ .+-+
T Consensus        80 vi~~a~~~~~~---------~~~~~~~~l~~aa~~~g~v~~~  112 (313)
T 1qyd_A           80 VISALAGGVLS---------HHILEQLKLVEAIKEAGNIKRF  112 (313)
T ss_dssp             EEECCCCSSSS---------TTTTTHHHHHHHHHHSCCCSEE
T ss_pred             EEECCccccch---------hhHHHHHHHHHHHHhcCCCceE
Confidence            99998754211         14445577778887765 4443

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A

Probab=97.69  E-value=5.3e-05  Score=68.82  Aligned_cols=144  Identities=16%  Similarity=0.174  Sum_probs=82.5

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc--hhHHHHHhcCCCCCeEEEEe-CCCc---HHhhhC------
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFL-GQPQ---LENALT------  109 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~--~g~~~dl~~~~~~~~v~~~~-~~~d---~~~al~------  109 (354)
                      .+++.|+||+|.+|.+++..|+..|.  +|++.|++..  .....++..     .+..+. +-+|   .+++++      
T Consensus         8 ~k~vlVTGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~-----~~~~~~~D~~~~~~v~~~~~~~~~~~   80 (259)
T 4e6p_A            8 GKSALITGSARGIGRAFAEAYVREGA--TVAIADIDIERARQAAAEIGP-----AAYAVQMDVTRQDSIDAAIAATVEHA   80 (259)
T ss_dssp             TCEEEEETCSSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHCT-----TEEEEECCTTCHHHHHHHHHHHHHHS
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHhCC-----CceEEEeeCCCHHHHHHHHHHHHHHc
Confidence            45899999999999999999999998  8999998762  222233321     111111 1122   233333      


Q ss_pred             -CCcEEEEcCCCCCCCC---CC---HHHHHHHHHHH----HHHHHHHHhhhCCCeEEEEecCCCCCchHHHHHHHHHhCC
Q 018512          110 -GMDLVIIPAGVPRKPG---MT---RDDLFNINAGI----VRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGT  178 (354)
Q Consensus       110 -~aDvVIi~ag~~~~~g---~~---r~d~~~~n~~~----~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~~~~~~~~~  178 (354)
                       +.|++|+.||......   .+   ....+..|+..    .+...+.+.+..+.+.|+++|......            +
T Consensus        81 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~------------~  148 (259)
T 4e6p_A           81 GGLDILVNNAALFDLAPIVEITRESYEKLFAINVAGTLFTLQAAARQMIAQGRGGKIINMASQAGRR------------G  148 (259)
T ss_dssp             SSCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTS------------C
T ss_pred             CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEECChhhcc------------C
Confidence             8999999998753211   12   22344566554    444555555555567777776432111            2


Q ss_pred             CCCCCEEEeccchHHHHHHHHHHHhC
Q 018512          179 YDPKKLLGVTMLDVVRANTFVAEVLG  204 (354)
Q Consensus       179 ~p~~kviG~t~ld~~r~~~~la~~l~  204 (354)
                      .|..-.++.+......+.+.++..++
T Consensus       149 ~~~~~~Y~asK~a~~~~~~~la~e~~  174 (259)
T 4e6p_A          149 EALVAIYCATKAAVISLTQSAGLDLI  174 (259)
T ss_dssp             CTTBHHHHHHHHHHHHHHHHHHHHHG
T ss_pred             CCCChHHHHHHHHHHHHHHHHHHHhh
Confidence            23222333333334456677777763

>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}

Probab=97.69  E-value=0.00015  Score=68.09  Aligned_cols=71  Identities=11%  Similarity=0.190  Sum_probs=48.6

Q ss_pred             CCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcCC
Q 018512           40 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG  119 (354)
Q Consensus        40 ~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~ag  119 (354)
                      ..+|||+|||+ |.+|..++..|...|+ .+|+++|+++.......+....    +..   .+++.+++++||+||++..
T Consensus        22 ~~~~~I~iIG~-G~mG~~~A~~L~~~G~-~~V~~~dr~~~~~~~~~~~~~g----~~~---~~~~~e~~~~aDvVi~~vp   92 (312)
T 3qsg_A           22 SNAMKLGFIGF-GEAASAIASGLRQAGA-IDMAAYDAASAESWRPRAEELG----VSC---KASVAEVAGECDVIFSLVT   92 (312)
T ss_dssp             ---CEEEEECC-SHHHHHHHHHHHHHSC-CEEEEECSSCHHHHHHHHHHTT----CEE---CSCHHHHHHHCSEEEECSC
T ss_pred             CCCCEEEEECc-cHHHHHHHHHHHHCCC-CeEEEEcCCCCHHHHHHHHHCC----CEE---eCCHHHHHhcCCEEEEecC
Confidence            34689999999 9999999999998875 4899999963011112223222    222   2466788999999999853

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}

Probab=97.69  E-value=6e-05  Score=69.62  Aligned_cols=165  Identities=13%  Similarity=0.111  Sum_probs=83.1

Q ss_pred             chhhhhhhhcccCCCCCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCCCCeEEEEe-CC
Q 018512           25 ENSCLRQAKCRAKGGAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQ  101 (354)
Q Consensus        25 ~~~~~~~~~~~~~~~~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~~~~v~~~~-~~  101 (354)
                      .+.+|+..-+......+.+++.|+||+|.+|.+++..|+..|.  +|++.|++.  ......++..... ..+..+. +-
T Consensus        16 ~~l~~~~~~~~~~~~l~gk~~lVTGas~GIG~aia~~la~~G~--~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~Dv   92 (281)
T 4dry_A           16 ENLYFQSMMAQGKGSGEGRIALVTGGGTGVGRGIAQALSAEGY--SVVITGRRPDVLDAAAGEIGGRTG-NIVRAVVCDV   92 (281)
T ss_dssp             ------------------CEEEETTTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHHHS-SCEEEEECCT
T ss_pred             ceEEEeccccccCCCCCCCEEEEeCCCCHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHhcCC-CeEEEEEcCC
Confidence            4556654433332334456899999999999999999999998  899999976  2222333322111 1111111 11


Q ss_pred             Cc---HHhhh-------CCCcEEEEcCCCCCCCC----CCH---HHHHHHHHHH----HHHHHHHHhhhC-CCeEEEEec
Q 018512          102 PQ---LENAL-------TGMDLVIIPAGVPRKPG----MTR---DDLFNINAGI----VRTLCEGIAKCC-PNATVNLIS  159 (354)
Q Consensus       102 ~d---~~~al-------~~aDvVIi~ag~~~~~g----~~r---~d~~~~n~~~----~~~i~~~i~~~~-p~a~viv~t  159 (354)
                      +|   .++++       ...|++|+.||.....+    .+.   ...+.-|+..    .+.+.+.+.+.. ..+.||++|
T Consensus        93 ~d~~~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~is  172 (281)
T 4dry_A           93 GDPDQVAALFAAVRAEFARLDLLVNNAGSNVPPVPLEEVTFEQWNGIVAANLTGAFLCTQHAFRMMKAQTPRGGRIINNG  172 (281)
T ss_dssp             TCHHHHHHHHHHHHHHHSCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEEC
T ss_pred             CCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCcEEEEEC
Confidence            22   22222       46799999998753221    222   2345556544    556666666554 357777776


Q ss_pred             CCCCCchHHHHHHHHHhCCCCCCCEEEeccchHHHHHHHHHHHhC
Q 018512          160 NPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEVLG  204 (354)
Q Consensus       160 NPv~~~~~~~~~~~~~~~~~p~~kviG~t~ld~~r~~~~la~~l~  204 (354)
                      .-....            +.+..-.++.+......+.+.+|..++
T Consensus       173 S~~~~~------------~~~~~~~Y~asKaa~~~l~~~la~e~~  205 (281)
T 4dry_A          173 SISAQT------------PRPNSAPYTATKHAITGLTKSTALDGR  205 (281)
T ss_dssp             CGGGTC------------CCTTCHHHHHHHHHHHHHHHHHHHHHG
T ss_pred             CHHhCC------------CCCCChhHHHHHHHHHHHHHHHHHHhc
Confidence            422111            223223344443334456677777664

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*

Probab=97.69  E-value=5.7e-05  Score=68.90  Aligned_cols=101  Identities=13%  Similarity=0.111  Sum_probs=63.2

Q ss_pred             eEEEEcCCCchHHHHHHHHHhC--CCCcEEEEEecCCchhHHHHHhcCCCCCeEEE-EeCCCcHHhhhCCCcEEEEcCCC
Q 018512           44 KVAILGAAGGIGQPLAMLMKIN--PLVSVLHLYDVVNTPGVTADISHMDTGAVVRG-FLGQPQLENALTGMDLVIIPAGV  120 (354)
Q Consensus        44 kI~IiGa~G~vG~~~a~~l~~~--~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~-~~~~~d~~~al~~aDvVIi~ag~  120 (354)
                      ||.|+||+|++|++++..|+..  +.  +|+++++++....  ++..... ..+.. +....++.++++++|+||++++.
T Consensus         1 ~ilVtGatG~iG~~l~~~L~~~~~g~--~V~~~~r~~~~~~--~~~~~~~-~~~~~D~~d~~~~~~~~~~~d~vi~~a~~   75 (286)
T 2zcu_A            1 MIAITGATGQLGHYVIESLMKTVPAS--QIVAIVRNPAKAQ--ALAAQGI-TVRQADYGDEAALTSALQGVEKLLLISSS   75 (286)
T ss_dssp             CEEEESTTSHHHHHHHHHHTTTSCGG--GEEEEESCTTTCH--HHHHTTC-EEEECCTTCHHHHHHHTTTCSEEEECC--
T ss_pred             CEEEEcCCchHHHHHHHHHHhhCCCc--eEEEEEcChHhhh--hhhcCCC-eEEEcCCCCHHHHHHHHhCCCEEEEeCCC
Confidence            5899999999999999999887  65  8999998762211  1211110 01111 11112456788999999999875


Q ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 018512          121 PRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  159 (354)
Q Consensus       121 ~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~t  159 (354)
                      ..          ..|+...+++++.+++.+...+|.+.|
T Consensus        76 ~~----------~~~~~~~~~l~~a~~~~~~~~~v~~Ss  104 (286)
T 2zcu_A           76 EV----------GQRAPQHRNVINAAKAAGVKFIAYTSL  104 (286)
T ss_dssp             ----------------CHHHHHHHHHHHHTCCEEEEEEE
T ss_pred             Cc----------hHHHHHHHHHHHHHHHcCCCEEEEECC
Confidence            31          146778888888888876555555444

>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}

Probab=97.68  E-value=0.00013  Score=70.95  Aligned_cols=116  Identities=9%  Similarity=0.041  Sum_probs=71.5

Q ss_pred             CCCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCch--h---HHHHHhcC-------CCCCeEEEEeC----CC
Q 018512           39 GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP--G---VTADISHM-------DTGAVVRGFLG----QP  102 (354)
Q Consensus        39 ~~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~--g---~~~dl~~~-------~~~~~v~~~~~----~~  102 (354)
                      ..++++|.|+||+|++|+.++..|...+.  +|++++++...  +   ....+...       .....+..+..    ..
T Consensus        66 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~--~V~~~~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~  143 (427)
T 4f6c_A           66 HRPLGNTLLTGATGFLGAYLIEALQGYSH--RIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMD  143 (427)
T ss_dssp             CCCCEEEEEECTTSHHHHHHHHHHTTTEE--EEEEEEECSSHHHHHHHHHHHHHHHSCHHHHHHHHTTEEEEEECC---C
T ss_pred             CCCCCEEEEecCCcHHHHHHHHHHHcCCC--EEEEEECCCChHHHHHHHHHHHHHhccccccccccCceEEEeCCCCCcc
Confidence            45567999999999999999999977666  89999987631  1   11111110       00012222111    11


Q ss_pred             cHHhhhCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 018512          103 QLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  159 (354)
Q Consensus       103 d~~~al~~aDvVIi~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~t  159 (354)
                      .+. ++.++|+||++|+..... ....+....|+....++++.+.+ ....+|.+.|
T Consensus       144 ~l~-~~~~~d~Vih~A~~~~~~-~~~~~~~~~Nv~g~~~l~~aa~~-~~~~~v~~SS  197 (427)
T 4f6c_A          144 DVV-LPENMDTIIHAGARTDHF-GDDDEFEKVNVQGTVDVIRLAQQ-HHARLIYVST  197 (427)
T ss_dssp             CCC-CSSCCSEEEECCCCC--------CHHHHHHHHHHHHHHHHHH-TTCEEEEEEE
T ss_pred             cCC-CcCCCCEEEECCcccCCC-CCHHHHHHHHHHHHHHHHHHHHh-cCCcEEEECc
Confidence            222 678999999999865322 23455678899999999999988 4344444443

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A

Probab=97.68  E-value=0.00018  Score=65.08  Aligned_cols=114  Identities=17%  Similarity=0.232  Sum_probs=71.4

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEe-CCCc---HHhhhC-------C
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFL-GQPQ---LENALT-------G  110 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~-~~~d---~~~al~-------~  110 (354)
                      .+++.|+||+|.+|.+++..|+..|.  +|++.|++.......++....  ..+..+. +-+|   ++++++       +
T Consensus         4 ~k~vlVTGas~giG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~l~~~~--~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   79 (255)
T 2q2v_A            4 GKTALVTGSTSGIGLGIAQVLARAGA--NIVLNGFGDPAPALAEIARHG--VKAVHHPADLSDVAQIEALFALAEREFGG   79 (255)
T ss_dssp             TCEEEESSCSSHHHHHHHHHHHHTTC--EEEEECSSCCHHHHHHHHTTS--CCEEEECCCTTSHHHHHHHHHHHHHHHSS
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEeCCchHHHHHHHHhcC--CceEEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence            45899999999999999999999997  899999876433333443322  1222221 1122   334444       8


Q ss_pred             CcEEEEcCCCCCCC---CCC---HHHHHHHHHH----HHHHHHHHHhhhCCCeEEEEecC
Q 018512          111 MDLVIIPAGVPRKP---GMT---RDDLFNINAG----IVRTLCEGIAKCCPNATVNLISN  160 (354)
Q Consensus       111 aDvVIi~ag~~~~~---g~~---r~d~~~~n~~----~~~~i~~~i~~~~p~a~viv~tN  160 (354)
                      .|+||+.||.....   ..+   ....+..|+.    ..+.+.+.+++.. .+.||++|.
T Consensus        80 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-~g~iv~isS  138 (255)
T 2q2v_A           80 VDILVNNAGIQHVAPVEQFPLESWDKIIALNLSAVFHGTRLALPGMRARN-WGRIINIAS  138 (255)
T ss_dssp             CSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECC
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEEcC
Confidence            99999999865321   112   2334556665    5666667666543 456666654

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}

Probab=97.67  E-value=0.00018  Score=65.33  Aligned_cols=118  Identities=19%  Similarity=0.155  Sum_probs=70.0

Q ss_pred             CCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCCCCeEEEEe-CCCc---HHhh------
Q 018512           40 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQ---LENA------  107 (354)
Q Consensus        40 ~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~~~~v~~~~-~~~d---~~~a------  107 (354)
                      .+.++|.|+||+|.+|.+++..|+..|.  +|++.|++.  ......++....  ..+..+. +-+|   ..++      
T Consensus        27 l~~k~vlITGas~gIG~~la~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~v~~~~~~~~~  102 (262)
T 3rkr_A           27 LSGQVAVVTGASRGIGAAIARKLGSLGA--RVVLTARDVEKLRAVEREIVAAG--GEAESHACDLSHSDAIAAFATGVLA  102 (262)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHTT--CEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHHhC--CceeEEEecCCCHHHHHHHHHHHHH
Confidence            3446899999999999999999999997  899999976  233333443322  2233221 1122   2222      


Q ss_pred             -hCCCcEEEEcCCCCCCCC----CC---HHHHHHHHHHHHHHHHHH----HhhhCCCeEEEEecCCC
Q 018512          108 -LTGMDLVIIPAGVPRKPG----MT---RDDLFNINAGIVRTLCEG----IAKCCPNATVNLISNPV  162 (354)
Q Consensus       108 -l~~aDvVIi~ag~~~~~g----~~---r~d~~~~n~~~~~~i~~~----i~~~~p~a~viv~tNPv  162 (354)
                       +...|+||+.||.....+    .+   ....+.-|+.....+.+.    +++. ..+.||++|...
T Consensus       103 ~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-~~g~iv~isS~~  168 (262)
T 3rkr_A          103 AHGRCDVLVNNAGVGWFGGPLHTMKPAEWDALIAVNLKAPYLLLRAFAPAMIAA-KRGHIINISSLA  168 (262)
T ss_dssp             HHSCCSEEEECCCCCCCSSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-TCCEEEEECSSC
T ss_pred             hcCCCCEEEECCCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC-CCceEEEEechh
Confidence             236899999998732221    22   233455665554444444    4433 456667666433

>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9

Probab=97.66  E-value=0.00019  Score=58.05  Aligned_cols=73  Identities=23%  Similarity=0.240  Sum_probs=45.1

Q ss_pred             CCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCc---HH-hhhCCCcEEE
Q 018512           40 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQ---LE-NALTGMDLVI  115 (354)
Q Consensus        40 ~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d---~~-~al~~aDvVI  115 (354)
                      ++.|||+|+|+ |.+|+.++..|...+.  +|+++|.++..  ...+.... ..... .....+   +. ..++++|+||
T Consensus         2 ~~~m~i~IiG~-G~iG~~~a~~L~~~g~--~v~~~d~~~~~--~~~~~~~~-~~~~~-~~d~~~~~~l~~~~~~~~d~vi   74 (140)
T 1lss_A            2 SHGMYIIIAGI-GRVGYTLAKSLSEKGH--DIVLIDIDKDI--CKKASAEI-DALVI-NGDCTKIKTLEDAGIEDADMYI   74 (140)
T ss_dssp             ---CEEEEECC-SHHHHHHHHHHHHTTC--EEEEEESCHHH--HHHHHHHC-SSEEE-ESCTTSHHHHHHTTTTTCSEEE
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCC--eEEEEECCHHH--HHHHHHhc-CcEEE-EcCCCCHHHHHHcCcccCCEEE
Confidence            34589999999 9999999999998886  89999987521  12222110 11111 111112   12 2368999999


Q ss_pred             EcCC
Q 018512          116 IPAG  119 (354)
Q Consensus       116 i~ag  119 (354)
                      ++.+
T Consensus        75 ~~~~   78 (140)
T 1lss_A           75 AVTG   78 (140)
T ss_dssp             ECCS
T ss_pred             EeeC
Confidence            9853

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}

Probab=97.66  E-value=0.00015  Score=67.53  Aligned_cols=116  Identities=17%  Similarity=0.173  Sum_probs=71.2

Q ss_pred             CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCCCCeEEEEe-CCCc---HHhhh------
Q 018512           41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQ---LENAL------  108 (354)
Q Consensus        41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~~~~v~~~~-~~~d---~~~al------  108 (354)
                      +.++|.|+||+|.+|..++..|+..|.  +|++.|++.  ......++....  ..+..+. +-+|   .++++      
T Consensus        30 ~gk~vlVTGas~gIG~~la~~l~~~G~--~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~~  105 (301)
T 3tjr_A           30 DGRAAVVTGGASGIGLATATEFARRGA--RLVLSDVDQPALEQAVNGLRGQG--FDAHGVVCDVRHLDEMVRLADEAFRL  105 (301)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHhcC--CceEEEEccCCCHHHHHHHHHHHHHh
Confidence            345899999999999999999999997  899999976  233334444322  1222211 1122   22333      


Q ss_pred             -CCCcEEEEcCCCCCCCC---CC---HHHHHHHHHHH----HHHHHHHHhhhCCCeEEEEecC
Q 018512          109 -TGMDLVIIPAGVPRKPG---MT---RDDLFNINAGI----VRTLCEGIAKCCPNATVNLISN  160 (354)
Q Consensus       109 -~~aDvVIi~ag~~~~~g---~~---r~d~~~~n~~~----~~~i~~~i~~~~p~a~viv~tN  160 (354)
                       ...|+||+.||......   .+   ....+.-|+..    ++.+.+.+.+..+.+.|+++|.
T Consensus       106 ~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS  168 (301)
T 3tjr_A          106 LGGVDVVFSNAGIVVAGPLAQMNHDDWRWVIDIDLWGSIHAVEAFLPRLLEQGTGGHIAFTAS  168 (301)
T ss_dssp             HSSCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECC
T ss_pred             CCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCcEEEEeCc
Confidence             37899999999753211   12   22344556544    4444555565555677777764

>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A*

Probab=97.66  E-value=4.4e-05  Score=70.86  Aligned_cols=163  Identities=15%  Similarity=0.188  Sum_probs=92.3

Q ss_pred             eEEEEcCCCchHHHHHHHHHhC--CCCcEEEEEecCCchhHHHHHhcCCCCCeEEE-EeCCCcHHhhhC--CCcEEEEcC
Q 018512           44 KVAILGAAGGIGQPLAMLMKIN--PLVSVLHLYDVVNTPGVTADISHMDTGAVVRG-FLGQPQLENALT--GMDLVIIPA  118 (354)
Q Consensus        44 kI~IiGa~G~vG~~~a~~l~~~--~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~-~~~~~d~~~al~--~aDvVIi~a  118 (354)
                      ||.|+||+|++|++++..|+..  +.  +|+++|++.....     ..   ..+.. +....++.++++  ++|+||++|
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~~~g~--~V~~~~r~~~~~~-----~~---~~~~~D~~d~~~~~~~~~~~~~d~vih~a   70 (317)
T 3ajr_A            1 MILVTGSSGQIGTELVPYLAEKYGKK--NVIASDIVQRDTG-----GI---KFITLDVSNRDEIDRAVEKYSIDAIFHLA   70 (317)
T ss_dssp             CEEEESTTSTTHHHHHHHHHHHHCGG--GEEEEESSCCCCT-----TC---CEEECCTTCHHHHHHHHHHTTCCEEEECC
T ss_pred             CEEEEcCCcHHHHHHHHHHHHhcCCC--EEEEecCCCcccc-----Cc---eEEEecCCCHHHHHHHHhhcCCcEEEECC
Confidence            6899999999999999999887  55  7899987652110     10   11111 111123455666  899999998


Q ss_pred             CCCCCCC-CCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCCchHHHHHHHHHhCCCCCCCEEEeccchHHHHHH
Q 018512          119 GVPRKPG-MTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANT  197 (354)
Q Consensus       119 g~~~~~g-~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~~~~~~~~~~p~~kviG~t~ld~~r~~~  197 (354)
                      +...... ....+.+..|+....++++.+.+.+.+.+|.+.|.-+.....- ...........+...+|.+.....++..
T Consensus        71 ~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~-~~~~~e~~~~~p~~~Y~~sK~~~e~~~~  149 (317)
T 3ajr_A           71 GILSAKGEKDPALAYKVNMNGTYNILEAAKQHRVEKVVIPSTIGVFGPETP-KNKVPSITITRPRTMFGVTKIAAELLGQ  149 (317)
T ss_dssp             CCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGCCTTSC-SSSBCSSSCCCCCSHHHHHHHHHHHHHH
T ss_pred             cccCCccccChHHHhhhhhHHHHHHHHHHHHcCCCEEEEecCHHHhCCCCC-CCCccccccCCCCchHHHHHHHHHHHHH
Confidence            8642111 2344567889999999999998876555544444211100000 0000000011123344555444555555


Q ss_pred             HHHHHhCCCCCCCc-ceEEee
Q 018512          198 FVAEVLGLDPRDVD-VPVVGG  217 (354)
Q Consensus       198 ~la~~l~v~~~~v~-~~v~G~  217 (354)
                      .+++..|++..-++ ..++|.
T Consensus       150 ~~~~~~~~~~~~lR~~~~~g~  170 (317)
T 3ajr_A          150 YYYEKFGLDVRSLRYPGIISY  170 (317)
T ss_dssp             HHHHHHCCEEEEEEECEEECS
T ss_pred             HHHHhcCCeEEEEecCcEecc
Confidence            56666777655554 566774

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0

Probab=97.64  E-value=0.00014  Score=65.42  Aligned_cols=146  Identities=14%  Similarity=0.122  Sum_probs=80.4

Q ss_pred             CCCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc--hhHHHHHhcCCCCCeEEEE-eCCCc---HHhhh---C
Q 018512           39 GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGF-LGQPQ---LENAL---T  109 (354)
Q Consensus        39 ~~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~--~g~~~dl~~~~~~~~v~~~-~~~~d---~~~al---~  109 (354)
                      ..+.++|.|+||+|.+|.+++..|+..|.  +|++.|++..  .....++..     .+... .+-++   ..+.+   .
T Consensus        11 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~-----~~~~~~~D~~~~~~~~~~~~~~~   83 (249)
T 3f9i_A           11 DLTGKTSLITGASSGIGSAIARLLHKLGS--KVIISGSNEEKLKSLGNALKD-----NYTIEVCNLANKEECSNLISKTS   83 (249)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHCS-----SEEEEECCTTSHHHHHHHHHTCS
T ss_pred             cCCCCEEEEECCCChHHHHHHHHHHHCCC--EEEEEcCCHHHHHHHHHHhcc-----CccEEEcCCCCHHHHHHHHHhcC
Confidence            44557899999999999999999999997  8999999752  222223321     11111 11122   22233   3


Q ss_pred             CCcEEEEcCCCCCCC------CCCHHHHHHHHHHHHHHHHH----HHhhhCCCeEEEEecCCCCCchHHHHHHHHHhCCC
Q 018512          110 GMDLVIIPAGVPRKP------GMTRDDLFNINAGIVRTLCE----GIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTY  179 (354)
Q Consensus       110 ~aDvVIi~ag~~~~~------g~~r~d~~~~n~~~~~~i~~----~i~~~~p~a~viv~tNPv~~~~~~~~~~~~~~~~~  179 (354)
                      +.|+||+.||.....      .......+..|+.....+.+    .+.+. ..+.|+++|......            +.
T Consensus        84 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~~g~iv~isS~~~~~------------~~  150 (249)
T 3f9i_A           84 NLDILVCNAGITSDTLAIRMKDQDFDKVIDINLKANFILNREAIKKMIQK-RYGRIINISSIVGIA------------GN  150 (249)
T ss_dssp             CCSEEEECCC-------------CHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCCCC--------------CC
T ss_pred             CCCEEEECCCCCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CCcEEEEEccHHhcc------------CC
Confidence            789999999864321      12234456666655444444    44433 356677776543221            22


Q ss_pred             CCCCEEEeccchHHHHHHHHHHHhC
Q 018512          180 DPKKLLGVTMLDVVRANTFVAEVLG  204 (354)
Q Consensus       180 p~~kviG~t~ld~~r~~~~la~~l~  204 (354)
                      |..-.++.+......+.+.++..++
T Consensus       151 ~~~~~Y~~sK~a~~~~~~~la~e~~  175 (249)
T 3f9i_A          151 PGQANYCASKAGLIGMTKSLSYEVA  175 (249)
T ss_dssp             SCSHHHHHHHHHHHHHHHHHHHHHG
T ss_pred             CCCchhHHHHHHHHHHHHHHHHHHH
Confidence            3333344443334456666776653

>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*

Probab=97.64  E-value=8.1e-05  Score=77.82  Aligned_cols=102  Identities=19%  Similarity=0.191  Sum_probs=67.8

Q ss_pred             CCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc---hhH--HH----HHhcCCCC---------CeEEEEeCC
Q 018512           40 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT---PGV--TA----DISHMDTG---------AVVRGFLGQ  101 (354)
Q Consensus        40 ~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~---~g~--~~----dl~~~~~~---------~~v~~~~~~  101 (354)
                      .+.+||+|||+ |.+|+.+|..++..|+  +|+++|+++.   .+.  ..    .+......         ..++.   +
T Consensus       312 ~~i~kV~VIGa-G~MG~~iA~~la~aG~--~V~l~D~~~~~~~~~~~~i~~~l~~~~~~G~~~~~~~~~~~~~i~~---~  385 (715)
T 1wdk_A          312 KDVKQAAVLGA-GIMGGGIAYQSASKGT--PILMKDINEHGIEQGLAEAAKLLVGRVDKGRMTPAKMAEVLNGIRP---T  385 (715)
T ss_dssp             CCCSSEEEECC-HHHHHHHHHHHHHTTC--CEEEECSSHHHHHHHHHHHHHHHHHHHTTTSSCHHHHHHHHHHEEE---E
T ss_pred             ccCCEEEEECC-ChhhHHHHHHHHhCCC--EEEEEECCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHhcCeEE---E
Confidence            34579999999 9999999999999998  8999999861   111  11    11111100         12443   2


Q ss_pred             CcHHhhhCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecCCCCC
Q 018512          102 PQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNS  164 (354)
Q Consensus       102 ~d~~~al~~aDvVIi~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~-p~a~viv~tNPv~~  164 (354)
                      +++ +++++||+||.+..              .+..+.+++...+.+++ |+++  ++||...+
T Consensus       386 ~d~-~~~~~aDlVIeaV~--------------e~~~vk~~v~~~l~~~~~~~~I--lasntStl  432 (715)
T 1wdk_A          386 LSY-GDFGNVDLVVEAVV--------------ENPKVKQAVLAEVENHVREDAI--LASNTSTI  432 (715)
T ss_dssp             SSS-TTGGGCSEEEECCC--------------SCHHHHHHHHHHHHTTSCTTCE--EEECCSSS
T ss_pred             CCH-HHHCCCCEEEEcCC--------------CCHHHHHHHHHHHHhhCCCCeE--EEeCCCCC
Confidence            455 78999999999842              23445667777788877 4664  36666554

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}

Probab=97.64  E-value=9.6e-05  Score=68.19  Aligned_cols=95  Identities=18%  Similarity=0.170  Sum_probs=60.8

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC-------chhH-HHHHhcCCCCCe-EEE-EeCCCcHHhhhCCC
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN-------TPGV-TADISHMDTGAV-VRG-FLGQPQLENALTGM  111 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~-------~~g~-~~dl~~~~~~~~-v~~-~~~~~d~~~al~~a  111 (354)
                      ++||+|+||+|++|++++..|+..|.  +|++++++.       .+.. ..++....  .. +.. +....++.++++++
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~--~V~~~~R~~~~~~~~~~~~~~~~~l~~~~--v~~v~~D~~d~~~l~~~~~~~   77 (307)
T 2gas_A            2 ENKILILGPTGAIGRHIVWASIKAGN--PTYALVRKTITAANPETKEELIDNYQSLG--VILLEGDINDHETLVKAIKQV   77 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHHTC--CEEEEECCSCCSSCHHHHHHHHHHHHHTT--CEEEECCTTCHHHHHHHHTTC
T ss_pred             CcEEEEECCCchHHHHHHHHHHhCCC--cEEEEECCCcccCChHHHHHHHHHHHhCC--CEEEEeCCCCHHHHHHHHhCC
Confidence            46899999999999999999998886  788888875       1111 11222221  11 111 11112456889999


Q ss_pred             cEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCe
Q 018512          112 DLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNA  153 (354)
Q Consensus       112 DvVIi~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~-p~a  153 (354)
                      |+||++++...             +...+++++.+++.+ .+-
T Consensus        78 d~vi~~a~~~~-------------~~~~~~l~~aa~~~g~v~~  107 (307)
T 2gas_A           78 DIVICAAGRLL-------------IEDQVKIIKAIKEAGNVKK  107 (307)
T ss_dssp             SEEEECSSSSC-------------GGGHHHHHHHHHHHCCCSE
T ss_pred             CEEEECCcccc-------------cccHHHHHHHHHhcCCceE
Confidence            99999987542             123345666777665 444

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*

Probab=97.63  E-value=0.00028  Score=67.18  Aligned_cols=102  Identities=16%  Similarity=0.127  Sum_probs=66.6

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCC-----CcHHhhhCCCcEEEE
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQ-----PQLENALTGMDLVII  116 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~-----~d~~~al~~aDvVIi  116 (354)
                      +++|.|+||+|++|++++..|+..+.  +|++++++.......++....   .+..+...     .++.++++++|+||+
T Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~--~V~~~~R~~~~~~~~~l~~~~---~v~~v~~D~l~d~~~l~~~~~~~d~Vi~   79 (352)
T 1xgk_A            5 KKTIAVVGATGRQGASLIRVAAAVGH--HVRAQVHSLKGLIAEELQAIP---NVTLFQGPLLNNVPLMDTLFEGAHLAFI   79 (352)
T ss_dssp             CCCEEEESTTSHHHHHHHHHHHHTTC--CEEEEESCSCSHHHHHHHTST---TEEEEESCCTTCHHHHHHHHTTCSEEEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCC--EEEEEECCCChhhHHHHhhcC---CcEEEECCccCCHHHHHHHHhcCCEEEE
Confidence            46899999999999999999998886  899999876332223333211   12222111     235678899999998


Q ss_pred             cCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEec
Q 018512          117 PAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLIS  159 (354)
Q Consensus       117 ~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~-p~a~viv~t  159 (354)
                      +++...   .      ..|... +++++.+++.+ ...+ |.+|
T Consensus        80 ~a~~~~---~------~~~~~~-~~l~~aa~~~g~v~~~-V~~S  112 (352)
T 1xgk_A           80 NTTSQA---G------DEIAIG-KDLADAAKRAGTIQHY-IYSS  112 (352)
T ss_dssp             CCCSTT---S------CHHHHH-HHHHHHHHHHSCCSEE-EEEE
T ss_pred             cCCCCC---c------HHHHHH-HHHHHHHHHcCCccEE-EEeC
Confidence            765331   1      225544 78888888776 4444 4444

>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A

Probab=97.63  E-value=0.0001  Score=68.03  Aligned_cols=96  Identities=13%  Similarity=0.076  Sum_probs=61.3

Q ss_pred             CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcCCC
Q 018512           41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGV  120 (354)
Q Consensus        41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~ag~  120 (354)
                      ++|||+|||+ |.+|..++..|...+...+|+++|+++...  ..+.......  ..   +.++++++++||+||++...
T Consensus         5 ~~~~I~iIG~-G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~--~~~~~~g~~~--~~---~~~~~~~~~~aDvVilavp~   76 (290)
T 3b1f_A            5 EEKTIYIAGL-GLIGASLALGIKRDHPHYKIVGYNRSDRSR--DIALERGIVD--EA---TADFKVFAALADVIILAVPI   76 (290)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHCTTSEEEEECSSHHHH--HHHHHTTSCS--EE---ESCTTTTGGGCSEEEECSCH
T ss_pred             ccceEEEEee-CHHHHHHHHHHHhCCCCcEEEEEcCCHHHH--HHHHHcCCcc--cc---cCCHHHhhcCCCEEEEcCCH
Confidence            3579999998 999999999998775434899999875211  1222221111  11   13456778999999998521


Q ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHHHhhh-C-CCeEEEEecC
Q 018512          121 PRKPGMTRDDLFNINAGIVRTLCEGIAKC-C-PNATVNLISN  160 (354)
Q Consensus       121 ~~~~g~~r~d~~~~n~~~~~~i~~~i~~~-~-p~a~viv~tN  160 (354)
                                      ....++++.+..+ . ++.+|+.++|
T Consensus        77 ----------------~~~~~v~~~l~~~~l~~~~ivi~~~~  102 (290)
T 3b1f_A           77 ----------------KKTIDFIKILADLDLKEDVIITDAGS  102 (290)
T ss_dssp             ----------------HHHHHHHHHHHTSCCCTTCEEECCCS
T ss_pred             ----------------HHHHHHHHHHHhcCCCCCCEEEECCC
Confidence                            1224556666655 3 6776665554

>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}

Probab=97.62  E-value=0.00022  Score=66.33  Aligned_cols=90  Identities=20%  Similarity=0.296  Sum_probs=60.1

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcCCCC
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVP  121 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~ag~~  121 (354)
                      .+||+|||+ |.+|..++..|+..|+  +|+++|+++....  .+....    +..   +++++++++ ||+||++...+
T Consensus        15 ~~~I~vIG~-G~mG~~~A~~l~~~G~--~V~~~dr~~~~~~--~~~~~g----~~~---~~~~~~~~~-aDvvi~~vp~~   81 (296)
T 3qha_A           15 QLKLGYIGL-GNMGAPMATRMTEWPG--GVTVYDIRIEAMT--PLAEAG----ATL---ADSVADVAA-ADLIHITVLDD   81 (296)
T ss_dssp             CCCEEEECC-STTHHHHHHHHTTSTT--CEEEECSSTTTSH--HHHHTT----CEE---CSSHHHHTT-SSEEEECCSSH
T ss_pred             CCeEEEECc-CHHHHHHHHHHHHCCC--eEEEEeCCHHHHH--HHHHCC----CEE---cCCHHHHHh-CCEEEEECCCh
Confidence            469999999 9999999999999887  8999999872211  122211    222   356778888 99999985321


Q ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEec
Q 018512          122 RKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLIS  159 (354)
Q Consensus       122 ~~~g~~r~d~~~~n~~~~~~i~~~i~~~~-p~a~viv~t  159 (354)
                                     ..++++++.+.+.. |+.+|+..|
T Consensus        82 ---------------~~~~~v~~~l~~~l~~g~ivv~~s  105 (296)
T 3qha_A           82 ---------------AQVREVVGELAGHAKPGTVIAIHS  105 (296)
T ss_dssp             ---------------HHHHHHHHHHHTTCCTTCEEEECS
T ss_pred             ---------------HHHHHHHHHHHHhcCCCCEEEEeC
Confidence                           12334445555544 566666555

>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}

Probab=97.62  E-value=0.00024  Score=66.81  Aligned_cols=104  Identities=19%  Similarity=0.171  Sum_probs=64.9

Q ss_pred             CCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCC-----CCCeEEE-EeCCCcHHhhhCCCcE
Q 018512           40 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMD-----TGAVVRG-FLGQPQLENALTGMDL  113 (354)
Q Consensus        40 ~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~-----~~~~v~~-~~~~~d~~~al~~aDv  113 (354)
                      -.++||+|||+ |.+|+.++..|...|+  +|.++ .++..  ...+....     ....... ...+++. ++++++|+
T Consensus        17 ~~~~kI~IiGa-Ga~G~~~a~~L~~~G~--~V~l~-~~~~~--~~~i~~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~D~   89 (318)
T 3hwr_A           17 FQGMKVAIMGA-GAVGCYYGGMLARAGH--EVILI-ARPQH--VQAIEATGLRLETQSFDEQVKVSASSDP-SAVQGADL   89 (318)
T ss_dssp             ---CEEEEESC-SHHHHHHHHHHHHTTC--EEEEE-CCHHH--HHHHHHHCEEEECSSCEEEECCEEESCG-GGGTTCSE
T ss_pred             ccCCcEEEECc-CHHHHHHHHHHHHCCC--eEEEE-EcHhH--HHHHHhCCeEEEcCCCcEEEeeeeeCCH-HHcCCCCE
Confidence            44689999999 9999999999999988  89999 65421  11111100     0011111 1112454 45789999


Q ss_pred             EEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecCCCCCch
Q 018512          114 VIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNSTV  166 (354)
Q Consensus       114 VIi~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~-p~a~viv~tNPv~~~~  166 (354)
                      ||++....                .+.++++.+..+. |+.+|+.++|..+...
T Consensus        90 vilavk~~----------------~~~~~l~~l~~~l~~~~~iv~~~nGi~~~~  127 (318)
T 3hwr_A           90 VLFCVKST----------------DTQSAALAMKPALAKSALVLSLQNGVENAD  127 (318)
T ss_dssp             EEECCCGG----------------GHHHHHHHHTTTSCTTCEEEEECSSSSHHH
T ss_pred             EEEEcccc----------------cHHHHHHHHHHhcCCCCEEEEeCCCCCcHH
Confidence            99984211                1345566676654 6788888899988753

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}

Probab=97.62  E-value=0.00013  Score=66.81  Aligned_cols=142  Identities=14%  Similarity=0.082  Sum_probs=82.7

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCch--hHHHHHhcCCCCCeEEEEe-CCCc---HHhhhC------
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP--GVTADISHMDTGAVVRGFL-GQPQ---LENALT------  109 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~--g~~~dl~~~~~~~~v~~~~-~~~d---~~~al~------  109 (354)
                      .++|.|+||+|++|++++..|+..|.  +|++.|++...  ....++   .  ..+..+. +-+|   .+++++      
T Consensus         5 ~k~vlVTGas~gIG~~~a~~l~~~G~--~V~~~~r~~~~~~~~~~~~---~--~~~~~~~~Dv~~~~~~~~~~~~~~~~~   77 (281)
T 3m1a_A            5 AKVWLVTGASSGFGRAIAEAAVAAGD--TVIGTARRTEALDDLVAAY---P--DRAEAISLDVTDGERIDVVAADVLARY   77 (281)
T ss_dssp             CCEEEETTTTSHHHHHHHHHHHHTTC--EEEEEESSGGGGHHHHHHC---T--TTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CcEEEEECCCChHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHhc---c--CCceEEEeeCCCHHHHHHHHHHHHHhC
Confidence            35799999999999999999999997  89999997622  111111   1  1122211 1122   223333      


Q ss_pred             -CCcEEEEcCCCCCCC---CCC---HHHHHHHHHHH----HHHHHHHHhhhCCCeEEEEecCCCCCchHHHHHHHHHhCC
Q 018512          110 -GMDLVIIPAGVPRKP---GMT---RDDLFNINAGI----VRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGT  178 (354)
Q Consensus       110 -~aDvVIi~ag~~~~~---g~~---r~d~~~~n~~~----~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~~~~~~~~~  178 (354)
                       +.|+||++||.....   ..+   ....+..|+..    .+.+.+.+++.. .+.||++|.....            .+
T Consensus        78 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~~~iv~~sS~~~~------------~~  144 (281)
T 3m1a_A           78 GRVDVLVNNAGRTQVGAFEETTERELRDLFELHVFGPARLTRALLPQMRERG-SGSVVNISSFGGQ------------LS  144 (281)
T ss_dssp             SCCSEEEECCCCEEECCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGT------------CC
T ss_pred             CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCEEEEEcCcccc------------CC
Confidence             789999999864211   122   23345667776    777777777654 3555665532211            12


Q ss_pred             CCCCCEEEeccchHHHHHHHHHHHh
Q 018512          179 YDPKKLLGVTMLDVVRANTFVAEVL  203 (354)
Q Consensus       179 ~p~~kviG~t~ld~~r~~~~la~~l  203 (354)
                      .|+.-.++.+......+.+.++..+
T Consensus       145 ~~~~~~Y~~sK~a~~~~~~~la~e~  169 (281)
T 3m1a_A          145 FAGFSAYSATKAALEQLSEGLADEV  169 (281)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCchHHHHHHHHHHHHHHHHHHHh
Confidence            3333334444434455666777764

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*

Probab=97.62  E-value=0.0003  Score=64.02  Aligned_cols=115  Identities=17%  Similarity=0.209  Sum_probs=69.6

Q ss_pred             CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc--hhHHHHHhcCCCCCeEEEEe-CCCc---HHhhhC-----
Q 018512           41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFL-GQPQ---LENALT-----  109 (354)
Q Consensus        41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~--~g~~~dl~~~~~~~~v~~~~-~~~d---~~~al~-----  109 (354)
                      +.++|.|+||+|.+|..++..|+..|.  +|++.|++..  .....++...   ..+..+. +-+|   ++++++     
T Consensus        15 ~~k~vlITGasggiG~~~a~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~~~~   89 (278)
T 2bgk_A           15 QDKVAIITGGAGGIGETTAKLFVRYGA--KVVIADIADDHGQKVCNNIGSP---DVISFVHCDVTKDEDVRNLVDTTIAK   89 (278)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHCCT---TTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCEEEEECCCCHHHHHHHHHHHHCCC--EEEEEcCChhHHHHHHHHhCCC---CceEEEECCCCCHHHHHHHHHHHHHH
Confidence            446899999999999999999999987  8999998752  2222233221   1222221 1122   233333     


Q ss_pred             --CCcEEEEcCCCCCCC-----CCC---HHHHHHHHHHHHHHHHHHHhhh---CCCeEEEEecC
Q 018512          110 --GMDLVIIPAGVPRKP-----GMT---RDDLFNINAGIVRTLCEGIAKC---CPNATVNLISN  160 (354)
Q Consensus       110 --~aDvVIi~ag~~~~~-----g~~---r~d~~~~n~~~~~~i~~~i~~~---~p~a~viv~tN  160 (354)
                        +.|+||+.||.....     ..+   ..+.+..|+.....+.+.+.++   ...+.|+++|.
T Consensus        90 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS  153 (278)
T 2bgk_A           90 HGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTAS  153 (278)
T ss_dssp             HSCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECC
T ss_pred             cCCCCEEEECCcccCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCeEEEEee
Confidence              799999999864321     122   2345566766666666555443   23466666654

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2

Probab=97.62  E-value=0.00032  Score=63.42  Aligned_cols=114  Identities=19%  Similarity=0.302  Sum_probs=68.5

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCCCCeEEEEe-CCCc---HHhhhC-------
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQ---LENALT-------  109 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~~~~v~~~~-~~~d---~~~al~-------  109 (354)
                      +++.|+||+|.+|..++..|+..|.  +|++.|++.  ......++....  ..+..+. +-+|   ++++++       
T Consensus         3 k~vlVTGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~v~~~~~~~~~~~g   78 (256)
T 1geg_A            3 KVALVTGAGQGIGKAIALRLVKDGF--AVAIADYNDATAKAVASEINQAG--GHAVAVKVDVSDRDQVFAAVEQARKTLG   78 (256)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHTT--CCEEEEECCTTSHHHHHHHHHHHHHHTT
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcC--CcEEEEEecCCCHHHHHHHHHHHHHHhC
Confidence            4799999999999999999999997  899999875  222233343222  1222211 1122   233333       


Q ss_pred             CCcEEEEcCCCCCCC---CCCH---HHHHHHHHH----HHHHHHHHHhhhCCCeEEEEecC
Q 018512          110 GMDLVIIPAGVPRKP---GMTR---DDLFNINAG----IVRTLCEGIAKCCPNATVNLISN  160 (354)
Q Consensus       110 ~aDvVIi~ag~~~~~---g~~r---~d~~~~n~~----~~~~i~~~i~~~~p~a~viv~tN  160 (354)
                      ..|++|+.||.....   ..+.   ...+..|+.    ..+.+.+.+++....+.||++|.
T Consensus        79 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS  139 (256)
T 1geg_A           79 GFDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACS  139 (256)
T ss_dssp             CCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECC
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCEEEEECc
Confidence            899999999865321   1222   234455654    44555566655543566777654

>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6

Probab=97.62  E-value=0.00021  Score=65.69  Aligned_cols=95  Identities=17%  Similarity=0.225  Sum_probs=59.9

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhC-CCcEEEEcCCCC
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALT-GMDLVIIPAGVP  121 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~-~aDvVIi~ag~~  121 (354)
                      +||+|||+ |.+|..++..|...|+..+|+++|+++...  ..+.......  ..   ++++.++++ +||+||++....
T Consensus         2 ~~I~iIG~-G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~--~~~~~~g~~~--~~---~~~~~~~~~~~aDvVilavp~~   73 (281)
T 2g5c_A            2 QNVLIVGV-GFMGGSFAKSLRRSGFKGKIYGYDINPESI--SKAVDLGIID--EG---TTSIAKVEDFSPDFVMLSSPVR   73 (281)
T ss_dssp             CEEEEESC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHH--HHHHHTTSCS--EE---ESCGGGGGGTCCSEEEECSCHH
T ss_pred             cEEEEEec-CHHHHHHHHHHHhcCCCcEEEEEeCCHHHH--HHHHHCCCcc--cc---cCCHHHHhcCCCCEEEEcCCHH
Confidence            69999998 999999999999887644899999875211  1122222111  11   135567888 999999984211


Q ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHHhhh-CCCeEEEEecCC
Q 018512          122 RKPGMTRDDLFNINAGIVRTLCEGIAKC-CPNATVNLISNP  161 (354)
Q Consensus       122 ~~~g~~r~d~~~~n~~~~~~i~~~i~~~-~p~a~viv~tNP  161 (354)
                                      ...++++.+..+ .++.+|+.++|.
T Consensus        74 ----------------~~~~v~~~l~~~l~~~~iv~~~~~~   98 (281)
T 2g5c_A           74 ----------------TFREIAKKLSYILSEDATVTDQGSV   98 (281)
T ss_dssp             ----------------HHHHHHHHHHHHSCTTCEEEECCSC
T ss_pred             ----------------HHHHHHHHHHhhCCCCcEEEECCCC
Confidence                            122334444443 367777766653

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}

Probab=97.61  E-value=2.6e-05  Score=70.67  Aligned_cols=150  Identities=13%  Similarity=0.053  Sum_probs=85.0

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEE-EeCCCcHHhh-------hCCCcEE
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRG-FLGQPQLENA-------LTGMDLV  114 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~-~~~~~d~~~a-------l~~aDvV  114 (354)
                      ++|.|+||+|.+|.+++..|+..|.  +|+++|++....     ..    ..+.. .....+.+++       +...|+|
T Consensus        23 k~vlITGas~gIG~~la~~l~~~G~--~V~~~~r~~~~~-----~~----~~~~~d~~d~~~v~~~~~~~~~~~g~iD~l   91 (251)
T 3orf_A           23 KNILVLGGSGALGAEVVKFFKSKSW--NTISIDFRENPN-----AD----HSFTIKDSGEEEIKSVIEKINSKSIKVDTF   91 (251)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESSCCTT-----SS----EEEECSCSSHHHHHHHHHHHHTTTCCEEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCC--EEEEEeCCcccc-----cc----cceEEEeCCHHHHHHHHHHHHHHcCCCCEE
Confidence            4799999999999999999999998  899999976211     00    00110 1111122222       2356999


Q ss_pred             EEcCCCCCCC----CCC---HHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecCCCCCchHHHHHHHHHhCCCCCCCEEE
Q 018512          115 IIPAGVPRKP----GMT---RDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLG  186 (354)
Q Consensus       115 Ii~ag~~~~~----g~~---r~d~~~~n~~~~~~i~~~i~~~~-p~a~viv~tNPv~~~~~~~~~~~~~~~~~p~~kviG  186 (354)
                      |++||.....    ..+   ....+..|+.....+.+.+..+. +.+.||++|.....            .+.+..-.++
T Consensus        92 i~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~------------~~~~~~~~Y~  159 (251)
T 3orf_A           92 VCAAGGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQGGLFVLTGASAAL------------NRTSGMIAYG  159 (251)
T ss_dssp             EECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGG------------SCCTTBHHHH
T ss_pred             EECCccCCCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhccCCEEEEEechhhc------------cCCCCCchhH
Confidence            9999864321    111   23345678877777777766554 34677777642211            1233322333


Q ss_pred             eccchHHHHHHHHHHHhCCCCCCCcceEE
Q 018512          187 VTMLDVVRANTFVAEVLGLDPRDVDVPVV  215 (354)
Q Consensus       187 ~t~ld~~r~~~~la~~l~v~~~~v~~~v~  215 (354)
                      .+......+.+.++..++..+..|++..+
T Consensus       160 ~sKaa~~~~~~~la~e~~~~~~gi~v~~v  188 (251)
T 3orf_A          160 ATKAATHHIIKDLASENGGLPAGSTSLGI  188 (251)
T ss_dssp             HHHHHHHHHHHHHTSTTSSSCTTCEEEEE
T ss_pred             HHHHHHHHHHHHHHHHhcccCCCcEEEEE
Confidence            33333334555555555433555655444

>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*

Probab=97.61  E-value=0.00014  Score=66.64  Aligned_cols=99  Identities=18%  Similarity=0.240  Sum_probs=64.2

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCC-CCe--EEEEeCCCcHHhhhCCCcEEEEcCC
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDT-GAV--VRGFLGQPQLENALTGMDLVIIPAG  119 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~-~~~--v~~~~~~~d~~~al~~aDvVIi~ag  119 (354)
                      |||+|||+ |.+|+.++..|...|+  +|.++|+++...  .++..... ...  .....  .+ .++++++|+||++..
T Consensus         1 m~i~iiG~-G~~G~~~a~~l~~~g~--~V~~~~r~~~~~--~~l~~~~~~~~~~~~~~~~--~~-~~~~~~~d~vi~~v~   72 (291)
T 1ks9_A            1 MKITVLGC-GALGQLWLTALCKQGH--EVQGWLRVPQPY--CSVNLVETDGSIFNESLTA--ND-PDFLATSDLLLVTLK   72 (291)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTC--EEEEECSSCCSE--EEEEEECTTSCEEEEEEEE--SC-HHHHHTCSEEEECSC
T ss_pred             CeEEEECc-CHHHHHHHHHHHhCCC--CEEEEEcCccce--eeEEEEcCCCceeeeeeee--cC-ccccCCCCEEEEEec
Confidence            69999999 9999999999999888  999999976211  01211110 111  11111  23 467899999999853


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecCCCCCc
Q 018512          120 VPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNST  165 (354)
Q Consensus       120 ~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~-p~a~viv~tNPv~~~  165 (354)
                      ..                .+.++++.+..+. ++.+|+..+|..+..
T Consensus        73 ~~----------------~~~~v~~~l~~~l~~~~~vv~~~~g~~~~  103 (291)
T 1ks9_A           73 AW----------------QVSDAVKSLASTLPVTTPILLIHNGMGTI  103 (291)
T ss_dssp             GG----------------GHHHHHHHHHTTSCTTSCEEEECSSSCTT
T ss_pred             HH----------------hHHHHHHHHHhhCCCCCEEEEecCCCCcH
Confidence            22                1234555566554 677778788887654

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*

Probab=97.61  E-value=8.4e-05  Score=69.19  Aligned_cols=94  Identities=17%  Similarity=0.200  Sum_probs=61.4

Q ss_pred             eEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc-hh-HHHHHhcCCCCCeE-EE-EeCCCcHHhhhCCCcEEEEcCC
Q 018512           44 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT-PG-VTADISHMDTGAVV-RG-FLGQPQLENALTGMDLVIIPAG  119 (354)
Q Consensus        44 kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~-~g-~~~dl~~~~~~~~v-~~-~~~~~d~~~al~~aDvVIi~ag  119 (354)
                      ||+|+||+|++|++++..|+..|.  +|++++++.. .. ...++....  ..+ .. +....++.++++++|+||++++
T Consensus        13 ~ilVtGatG~iG~~l~~~L~~~g~--~V~~l~R~~~~~~~~~~~l~~~~--v~~v~~Dl~d~~~l~~a~~~~d~vi~~a~   88 (318)
T 2r6j_A           13 KILIFGGTGYIGNHMVKGSLKLGH--PTYVFTRPNSSKTTLLDEFQSLG--AIIVKGELDEHEKLVELMKKVDVVISALA   88 (318)
T ss_dssp             CEEEETTTSTTHHHHHHHHHHTTC--CEEEEECTTCSCHHHHHHHHHTT--CEEEECCTTCHHHHHHHHTTCSEEEECCC
T ss_pred             eEEEECCCchHHHHHHHHHHHCCC--cEEEEECCCCchhhHHHHhhcCC--CEEEEecCCCHHHHHHHHcCCCEEEECCc
Confidence            899999999999999999999886  8899998762 22 122233221  111 11 1111346688999999999987


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCeE
Q 018512          120 VPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNAT  154 (354)
Q Consensus       120 ~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~-p~a~  154 (354)
                      ...             +...+++++.+++.+ .+-+
T Consensus        89 ~~~-------------~~~~~~l~~aa~~~g~v~~~  111 (318)
T 2r6j_A           89 FPQ-------------ILDQFKILEAIKVAGNIKRF  111 (318)
T ss_dssp             GGG-------------STTHHHHHHHHHHHCCCCEE
T ss_pred             hhh-------------hHHHHHHHHHHHhcCCCCEE
Confidence            532             223456677777765 4443

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*

Probab=97.61  E-value=0.00016  Score=65.34  Aligned_cols=115  Identities=17%  Similarity=0.167  Sum_probs=67.5

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEec-CC--chhHHHHHhcCCCCCeEEEEe-CCCc---HHhhhC-----
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDV-VN--TPGVTADISHMDTGAVVRGFL-GQPQ---LENALT-----  109 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~-~~--~~g~~~dl~~~~~~~~v~~~~-~~~d---~~~al~-----  109 (354)
                      .++|.|+||+|.+|++++..|+..|.  +|++.|+ +.  ......++....  ..+..+. +-+|   +.++++     
T Consensus         7 ~k~vlITGasggiG~~~a~~l~~~G~--~V~~~~r~~~~~~~~~~~~l~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~   82 (261)
T 1gee_A            7 GKVVVITGSSTGLGKSMAIRFATEKA--KVVVNYRSKEDEANSVLEEIKKVG--GEAIAVKGDVTVESDVINLVQSAIKE   82 (261)
T ss_dssp             TCEEEETTCSSHHHHHHHHHHHHTTC--EEEEEESSCHHHHHHHHHHHHHTT--CEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCC--EEEEEcCCChHHHHHHHHHHHhcC--CceEEEECCCCCHHHHHHHHHHHHHH
Confidence            35899999999999999999999987  8999998 43  222223333221  2222221 1122   223333     


Q ss_pred             --CCcEEEEcCCCCCCC---CCCH---HHHHHHHHHHHH----HHHHHHhhhCCCeEEEEecC
Q 018512          110 --GMDLVIIPAGVPRKP---GMTR---DDLFNINAGIVR----TLCEGIAKCCPNATVNLISN  160 (354)
Q Consensus       110 --~aDvVIi~ag~~~~~---g~~r---~d~~~~n~~~~~----~i~~~i~~~~p~a~viv~tN  160 (354)
                        +.|+||++||.....   ..+.   .+.+..|+....    .+.+.+.+..+.+.||++|.
T Consensus        83 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS  145 (261)
T 1gee_A           83 FGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSS  145 (261)
T ss_dssp             HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECC
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEeCC
Confidence              789999999865321   1222   234555655544    44444544443566666654

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=97.61  E-value=0.00018  Score=65.82  Aligned_cols=116  Identities=17%  Similarity=0.187  Sum_probs=65.0

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCC-CCCeEEEEe-CCCc---HHhhhC-----
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMD-TGAVVRGFL-GQPQ---LENALT-----  109 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~-~~~~v~~~~-~~~d---~~~al~-----  109 (354)
                      .+++.|+||+|.+|..++..|+..|.  +|++.|++.  ......++.... ....+..+. +-+|   ++++++     
T Consensus         6 ~k~vlVTGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   83 (278)
T 1spx_A            6 EKVAIITGSSNGIGRATAVLFAREGA--KVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGK   83 (278)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccCCHHHHHHHHHHHHHH
Confidence            35799999999999999999999987  899999875  222223331101 112232221 1122   233444     


Q ss_pred             --CCcEEEEcCCCCCCC---CC----CH---HHHHHHHHHHHHHHH----HHHhhhCCCeEEEEecCC
Q 018512          110 --GMDLVIIPAGVPRKP---GM----TR---DDLFNINAGIVRTLC----EGIAKCCPNATVNLISNP  161 (354)
Q Consensus       110 --~aDvVIi~ag~~~~~---g~----~r---~d~~~~n~~~~~~i~----~~i~~~~p~a~viv~tNP  161 (354)
                        +.|+||+.||.....   ..    +.   ...+..|+.....+.    +.+++..  +.||++|..
T Consensus        84 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~--g~iv~isS~  149 (278)
T 1spx_A           84 FGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTK--GEIVNISSI  149 (278)
T ss_dssp             HSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEECCT
T ss_pred             cCCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC--CeEEEEecc
Confidence              899999999864321   11    22   233455655444444    4444333  666766643

>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}

Probab=97.61  E-value=0.00035  Score=64.19  Aligned_cols=132  Identities=17%  Similarity=0.162  Sum_probs=75.5

Q ss_pred             cchhhhhhhhcccCCCCCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCCCCeEEEEe--
Q 018512           24 QENSCLRQAKCRAKGGAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL--   99 (354)
Q Consensus        24 ~~~~~~~~~~~~~~~~~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~~~~v~~~~--   99 (354)
                      .++.+|+.......-+-+.+++.|+||+|.+|..++..|+..|.  .|++.|++.  ......++....  ..+..+.  
T Consensus        15 ~~~~~~~~~~~~~~~~l~gk~~lVTGas~GIG~aia~~la~~G~--~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D   90 (275)
T 4imr_A           15 TENLYFQSMRLETIFGLRGRTALVTGSSRGIGAAIAEGLAGAGA--HVILHGVKPGSTAAVQQRIIASG--GTAQELAGD   90 (275)
T ss_dssp             ---CCSCTTSHHHHHCCTTCEEEETTCSSHHHHHHHHHHHHTTC--EEEEEESSTTTTHHHHHHHHHTT--CCEEEEECC
T ss_pred             ccccccccccccccCCCCCCEEEEECCCCHHHHHHHHHHHHCCC--EEEEEcCCHHHHHHHHHHHHhcC--CeEEEEEec
Confidence            55666664433322234456899999999999999999999998  899999987  333344444322  1222211  


Q ss_pred             --CCCcHHhhh------CCCcEEEEcCCCCCCCC---CCH---HHHHHHHHHH----HHHHHHHHhhhCCCeEEEEecC
Q 018512          100 --GQPQLENAL------TGMDLVIIPAGVPRKPG---MTR---DDLFNINAGI----VRTLCEGIAKCCPNATVNLISN  160 (354)
Q Consensus       100 --~~~d~~~al------~~aDvVIi~ag~~~~~g---~~r---~d~~~~n~~~----~~~i~~~i~~~~p~a~viv~tN  160 (354)
                        ...+.++.+      ...|++|+.||......   .+.   ...+.-|+..    .+.+.+.+++. ..+.||++|.
T Consensus        91 v~~~~~~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-~~g~Iv~isS  168 (275)
T 4imr_A           91 LSEAGAGTDLIERAEAIAPVDILVINASAQINATLSALTPNDLAFQLAVNLGSTVDMLQSALPKMVAR-KWGRVVSIGS  168 (275)
T ss_dssp             TTSTTHHHHHHHHHHHHSCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECC
T ss_pred             CCCHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCcEEEEECC
Confidence              111222233      37899999998653221   222   2334556544    44444445544 3566776654

>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}

Probab=97.61  E-value=0.00017  Score=68.26  Aligned_cols=99  Identities=19%  Similarity=0.194  Sum_probs=63.3

Q ss_pred             CCCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCC---CCC----eEEEEeCCCcHHhhhCCC
Q 018512           39 GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMD---TGA----VVRGFLGQPQLENALTGM  111 (354)
Q Consensus        39 ~~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~---~~~----~v~~~~~~~d~~~al~~a  111 (354)
                      ..-++||+|||+ |.+|+.++..|...|+  +|.++|+++.+.  ..+....   ..+    .+..   +++..+ ++++
T Consensus        11 ~~~~~kI~iIG~-G~mG~ala~~L~~~G~--~V~~~~r~~~~~--~~l~~~g~~~~~~~~~~~~~~---~~~~~~-~~~a   81 (335)
T 1z82_A           11 HHMEMRFFVLGA-GSWGTVFAQMLHENGE--EVILWARRKEIV--DLINVSHTSPYVEESKITVRA---TNDLEE-IKKE   81 (335)
T ss_dssp             ---CCEEEEECC-SHHHHHHHHHHHHTTC--EEEEECSSHHHH--HHHHHHSCBTTBTTCCCCSEE---ESCGGG-CCTT
T ss_pred             cccCCcEEEECc-CHHHHHHHHHHHhCCC--eEEEEeCCHHHH--HHHHHhCCcccCCCCeeeEEE---eCCHHH-hcCC
Confidence            344689999999 9999999999999988  999999975221  1122111   000    1232   235556 8999


Q ss_pred             cEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCC
Q 018512          112 DLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNS  164 (354)
Q Consensus       112 DvVIi~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv~~  164 (354)
                      |+||++...                ..+.++++.+..  ++..||.++|.++.
T Consensus        82 DvVil~vk~----------------~~~~~v~~~l~~--~~~~vv~~~nGi~~  116 (335)
T 1z82_A           82 DILVIAIPV----------------QYIREHLLRLPV--KPSMVLNLSKGIEI  116 (335)
T ss_dssp             EEEEECSCG----------------GGHHHHHTTCSS--CCSEEEECCCCCCT
T ss_pred             CEEEEECCH----------------HHHHHHHHHhCc--CCCEEEEEeCCCCC
Confidence            999998421                123344444443  67788888887654

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*

Probab=97.60  E-value=0.00075  Score=60.74  Aligned_cols=115  Identities=18%  Similarity=0.205  Sum_probs=69.3

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcE-EEEEecCCchhHHHHHhcCCCCCeEEEEe-CCCc----HHhhh-------
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSV-LHLYDVVNTPGVTADISHMDTGAVVRGFL-GQPQ----LENAL-------  108 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~e-i~L~D~~~~~g~~~dl~~~~~~~~v~~~~-~~~d----~~~al-------  108 (354)
                      .++|.|+||+|.+|..++..|+..|.  + |+++|++.......++........+..+. +-+|    .++++       
T Consensus         5 ~k~vlVtGas~gIG~~~a~~l~~~G~--~~v~~~~r~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   82 (254)
T 1sby_A            5 NKNVIFVAALGGIGLDTSRELVKRNL--KNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQL   82 (254)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTCC--SEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHHH
T ss_pred             CcEEEEECCCChHHHHHHHHHHHCCC--cEEEEEecCchHHHHHHHHHhCCCceEEEEEEecCCChHHHHHHHHHHHHhc
Confidence            45899999999999999999999987  5 89999876322223333211112233221 1112    22222       


Q ss_pred             CCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhh----hC--CCeEEEEecC
Q 018512          109 TGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAK----CC--PNATVNLISN  160 (354)
Q Consensus       109 ~~aDvVIi~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~----~~--p~a~viv~tN  160 (354)
                      .+.|+||+.||...  .......+..|+.....+.+.+.+    ..  +.+.|+++|.
T Consensus        83 g~id~lv~~Ag~~~--~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS  138 (254)
T 1sby_A           83 KTVDILINGAGILD--DHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICS  138 (254)
T ss_dssp             SCCCEEEECCCCCC--TTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECC
T ss_pred             CCCCEEEECCccCC--HHHHhhhheeeehhHHHHHHHHHHHHHHhcCCCCCEEEEECc
Confidence            37899999998642  233455666776665555555443    22  2466777764

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}

Probab=97.60  E-value=0.00036  Score=64.06  Aligned_cols=115  Identities=16%  Similarity=0.175  Sum_probs=69.1

Q ss_pred             CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCCCCeEEEEe-CCCc---HHhhh------
Q 018512           41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQ---LENAL------  108 (354)
Q Consensus        41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~~~~v~~~~-~~~d---~~~al------  108 (354)
                      +.++|.|+||+|.+|..++..|+..|.  +|++.|++.  ......++....   .+..+. +-+|   +++++      
T Consensus        28 ~~k~vlVTGas~gIG~aia~~L~~~G~--~V~~~~r~~~~~~~~~~~l~~~~---~~~~~~~Dv~d~~~v~~~~~~~~~~  102 (276)
T 2b4q_A           28 AGRIALVTGGSRGIGQMIAQGLLEAGA--RVFICARDAEACADTATRLSAYG---DCQAIPADLSSEAGARRLAQALGEL  102 (276)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC--EEEEECSCHHHHHHHHHHHTTSS---CEEECCCCTTSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcC---ceEEEEeeCCCHHHHHHHHHHHHHh
Confidence            345899999999999999999999997  899999875  222233343211   222211 1122   22222      


Q ss_pred             -CCCcEEEEcCCCCCCC---CCC---HHHHHHHHHHHH----HHHHHHHhhhCC---CeEEEEecC
Q 018512          109 -TGMDLVIIPAGVPRKP---GMT---RDDLFNINAGIV----RTLCEGIAKCCP---NATVNLISN  160 (354)
Q Consensus       109 -~~aDvVIi~ag~~~~~---g~~---r~d~~~~n~~~~----~~i~~~i~~~~p---~a~viv~tN  160 (354)
                       ...|+||+.||.....   ..+   ....+..|+...    +.+.+.+++...   .+.||++|.
T Consensus       103 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~g~iV~isS  168 (276)
T 2b4q_A          103 SARLDILVNNAGTSWGAALESYPVSGWEKVMQLNVTSVFSCIQQLLPLLRRSASAENPARVINIGS  168 (276)
T ss_dssp             CSCCSEEEECCCCCCCCCTTSCCSHHHHHHHHHHTHHHHHHHHHHHHHHHHHCCSSSCEEEEEECC
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCEEEEECC
Confidence             3789999999865321   112   234455665544    555566655543   166777654

>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6

Probab=97.60  E-value=0.00029  Score=66.17  Aligned_cols=98  Identities=24%  Similarity=0.298  Sum_probs=62.6

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEec--CCchhHHHHHhcCCC----C---CeEEEEeCCCcHHhhhCCCcE
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDV--VNTPGVTADISHMDT----G---AVVRGFLGQPQLENALTGMDL  113 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~--~~~~g~~~dl~~~~~----~---~~v~~~~~~~d~~~al~~aDv  113 (354)
                      |||+|||+ |.+|+.++..|...|+  +|.++|+  ++.  ....+.....    .   ..+... ...++.++++++|+
T Consensus         1 m~I~iiG~-G~mG~~~a~~L~~~g~--~V~~~~r~~~~~--~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~~~~~~D~   74 (335)
T 1txg_A            1 MIVSILGA-GAMGSALSVPLVDNGN--EVRIWGTEFDTE--ILKSISAGREHPRLGVKLNGVEIF-WPEQLEKCLENAEV   74 (335)
T ss_dssp             CEEEEESC-CHHHHHHHHHHHHHCC--EEEEECCGGGHH--HHHHHHTTCCBTTTTBCCCSEEEE-CGGGHHHHHTTCSE
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCC--eEEEEEccCCHH--HHHHHHHhCcCcccCccccceEEe-cHHhHHHHHhcCCE
Confidence            69999999 9999999999998887  9999998  542  1222322211    0   112322 11156678899999


Q ss_pred             EEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCC
Q 018512          114 VIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPV  162 (354)
Q Consensus       114 VIi~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv  162 (354)
                      ||++....                .+.++++.+....|+.+|+.++|.+
T Consensus        75 vi~~v~~~----------------~~~~v~~~i~~l~~~~~vv~~~ng~  107 (335)
T 1txg_A           75 VLLGVSTD----------------GVLPVMSRILPYLKDQYIVLISKGL  107 (335)
T ss_dssp             EEECSCGG----------------GHHHHHHHHTTTCCSCEEEECCCSE
T ss_pred             EEEcCChH----------------HHHHHHHHHhcCCCCCEEEEEcCcC
Confidence            99985322                1233444444433577777777766

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*

Probab=97.60  E-value=0.00053  Score=62.20  Aligned_cols=149  Identities=10%  Similarity=0.054  Sum_probs=86.7

Q ss_pred             CCeEEEEcCCCc--hHHHHHHHHHhCCCCcEEEEEecCC-chhHHHHHhcCCCCCeEEEE----eCCCcHHhhh------
Q 018512           42 GFKVAILGAAGG--IGQPLAMLMKINPLVSVLHLYDVVN-TPGVTADISHMDTGAVVRGF----LGQPQLENAL------  108 (354)
Q Consensus        42 ~~kI~IiGa~G~--vG~~~a~~l~~~~~~~ei~L~D~~~-~~g~~~dl~~~~~~~~v~~~----~~~~d~~~al------  108 (354)
                      .+++.|+||+|+  +|..++..|+..|.  +|++.|++. ......++........+..+    ....+.++.+      
T Consensus         7 ~k~vlVTGasg~~GIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~   84 (266)
T 3oig_A            7 GRNIVVMGVANKRSIAWGIARSLHEAGA--RLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTNDAEIETCFASIKEQ   84 (266)
T ss_dssp             TCEEEEECCCSTTSHHHHHHHHHHHTTC--EEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSSSHHHHHHHHHHHHH
T ss_pred             CCEEEEEcCCCCCcHHHHHHHHHHHCCC--EEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCCHHHHHHHHHHHHHH
Confidence            458999999988  99999999999998  899999876 22223333322111122221    1112222323      


Q ss_pred             -CCCcEEEEcCCCCCC-----C--CCC---HHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecCCCCCchHHHHHHHHHh
Q 018512          109 -TGMDLVIIPAGVPRK-----P--GMT---RDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNSTVPIAAEVFKKA  176 (354)
Q Consensus       109 -~~aDvVIi~ag~~~~-----~--g~~---r~d~~~~n~~~~~~i~~~i~~~~-p~a~viv~tNPv~~~~~~~~~~~~~~  176 (354)
                       ...|++|+.||....     +  ..+   ....+..|+.....+.+.+..+- +.+.||++|......           
T Consensus        85 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~-----------  153 (266)
T 3oig_A           85 VGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEGGSIVTLTYLGGEL-----------  153 (266)
T ss_dssp             HSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGGTS-----------
T ss_pred             hCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCCceEEEEecccccc-----------
Confidence             378999999987531     1  122   23345677777777777777665 356777776422111           


Q ss_pred             CCCCCCCEEEeccchHHHHHHHHHHHhC
Q 018512          177 GTYDPKKLLGVTMLDVVRANTFVAEVLG  204 (354)
Q Consensus       177 ~~~p~~kviG~t~ld~~r~~~~la~~l~  204 (354)
                       +.|..-.++.+......+.+.++..++
T Consensus       154 -~~~~~~~Y~asKaa~~~~~~~la~e~~  180 (266)
T 3oig_A          154 -VMPNYNVMGVAKASLDASVKYLAADLG  180 (266)
T ss_dssp             -CCTTTHHHHHHHHHHHHHHHHHHHHHG
T ss_pred             -cCCCcchhHHHHHHHHHHHHHHHHHHh
Confidence             233323334443334456677777664

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}

Probab=97.60  E-value=0.00031  Score=64.59  Aligned_cols=115  Identities=12%  Similarity=0.113  Sum_probs=70.1

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCCCCeEEEEe-CCCc---HHhhh-------
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQ---LENAL-------  108 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~~~~v~~~~-~~~d---~~~al-------  108 (354)
                      .+++.|+||+|.+|..++..|+..|.  +|++.|++.  ......++....  ..+..+. +-+|   .++++       
T Consensus        24 ~k~~lVTGas~GIG~aia~~la~~G~--~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~~~   99 (279)
T 3sju_A           24 PQTAFVTGVSSGIGLAVARTLAARGI--AVYGCARDAKNVSAAVDGLRAAG--HDVDGSSCDVTSTDEVHAAVAAAVERF   99 (279)
T ss_dssp             -CEEEEESTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHTTT--CCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcC--CcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            45799999999999999999999998  899999976  233334454332  2232221 1122   22222       


Q ss_pred             CCCcEEEEcCCCCCCCC---CC---HHHHHHHHHHHHHHHHHHHhh-----hCCCeEEEEecC
Q 018512          109 TGMDLVIIPAGVPRKPG---MT---RDDLFNINAGIVRTLCEGIAK-----CCPNATVNLISN  160 (354)
Q Consensus       109 ~~aDvVIi~ag~~~~~g---~~---r~d~~~~n~~~~~~i~~~i~~-----~~p~a~viv~tN  160 (354)
                      ...|++|+.||......   .+   ....+..|+.....+.+.+.+     ....+.||++|.
T Consensus       100 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~g~iV~isS  162 (279)
T 3sju_A          100 GPIGILVNSAGRNGGGETADLDDALWADVLDTNLTGVFRVTREVLRAGGMREAGWGRIVNIAS  162 (279)
T ss_dssp             CSCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSSHHHHTCEEEEEECC
T ss_pred             CCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhchhhHhhcCCcEEEEECC
Confidence            37899999998753221   12   233456677666666665433     123466777654

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}

Probab=97.60  E-value=8.9e-05  Score=64.30  Aligned_cols=104  Identities=14%  Similarity=0.174  Sum_probs=66.9

Q ss_pred             CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhC---CCcEEEEc
Q 018512           41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALT---GMDLVIIP  117 (354)
Q Consensus        41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~---~aDvVIi~  117 (354)
                      .+|||.|+||+|++|+.++..|+ .|.  +|+++|++... ...|+.+            ..+++++++   ..|+||++
T Consensus         2 ~kM~vlVtGasg~iG~~~~~~l~-~g~--~V~~~~r~~~~-~~~D~~~------------~~~~~~~~~~~~~~d~vi~~   65 (202)
T 3d7l_A            2 NAMKILLIGASGTLGSAVKERLE-KKA--EVITAGRHSGD-VTVDITN------------IDSIKKMYEQVGKVDAIVSA   65 (202)
T ss_dssp             CSCEEEEETTTSHHHHHHHHHHT-TTS--EEEEEESSSSS-EECCTTC------------HHHHHHHHHHHCCEEEEEEC
T ss_pred             CCcEEEEEcCCcHHHHHHHHHHH-CCC--eEEEEecCccc-eeeecCC------------HHHHHHHHHHhCCCCEEEEC
Confidence            34799999999999999999998 887  89999987520 0011111            112233343   48999999


Q ss_pred             CCCCCCCC---CCH---HHHHHHHHHHHHHHHHHHhhhCC-CeEEEEecC
Q 018512          118 AGVPRKPG---MTR---DDLFNINAGIVRTLCEGIAKCCP-NATVNLISN  160 (354)
Q Consensus       118 ag~~~~~g---~~r---~d~~~~n~~~~~~i~~~i~~~~p-~a~viv~tN  160 (354)
                      ||......   .+.   ...+..|+.....+++.+.+... .+.++++|.
T Consensus        66 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~~sS  115 (202)
T 3d7l_A           66 TGSATFSPLTELTPEKNAVTISSKLGGQINLVLLGIDSLNDKGSFTLTTG  115 (202)
T ss_dssp             CCCCCCCCGGGCCHHHHHHHHHTTTHHHHHHHHTTGGGEEEEEEEEEECC
T ss_pred             CCCCCCCChhhCCHHHHHHHHhhccHHHHHHHHHHHHHhccCCEEEEEcc
Confidence            98653221   122   23456788888888887776532 256666653

>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1

Probab=97.59  E-value=0.00017  Score=74.47  Aligned_cols=110  Identities=15%  Similarity=0.078  Sum_probs=73.4

Q ss_pred             CCCeEEEEcCCCchHHHHHHHHHhC-CCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCC-Cc----HHhhhCCCcEE
Q 018512           41 AGFKVAILGAAGGIGQPLAMLMKIN-PLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQ-PQ----LENALTGMDLV  114 (354)
Q Consensus        41 ~~~kI~IiGa~G~vG~~~a~~l~~~-~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~-~d----~~~al~~aDvV  114 (354)
                      ++|+|.|+||+|++|++++..|+.. +.  +|+++|++....  .++..   ...+..+... .|    +.++++++|+|
T Consensus       314 ~~~~VLVTGatG~IG~~l~~~Ll~~~g~--~V~~~~r~~~~~--~~~~~---~~~v~~v~~Dl~d~~~~~~~~~~~~D~V  386 (660)
T 1z7e_A          314 RRTRVLILGVNGFIGNHLTERLLREDHY--EVYGLDIGSDAI--SRFLN---HPHFHFVEGDISIHSEWIEYHVKKCDVV  386 (660)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHHHSSSE--EEEEEESCCTTT--GGGTT---CTTEEEEECCTTTCHHHHHHHHHHCSEE
T ss_pred             cCceEEEEcCCcHHHHHHHHHHHhcCCC--EEEEEEcCchhh--hhhcc---CCceEEEECCCCCcHHHHHHhhcCCCEE
Confidence            4578999999999999999999987 66  899999875211  11111   1223222111 11    34567899999


Q ss_pred             EEcCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 018512          115 IIPAGVPRKP--GMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  159 (354)
Q Consensus       115 Ii~ag~~~~~--g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~t  159 (354)
                      |++|+.....  .....+.+..|+....++++.+.+.+  ..++++|
T Consensus       387 ih~Aa~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~--~r~V~~S  431 (660)
T 1z7e_A          387 LPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYR--KRIIFPS  431 (660)
T ss_dssp             EECCCCCCTHHHHHSHHHHHHHHTHHHHHHHHHHHHTT--CEEEEEC
T ss_pred             EECceecCccccccCHHHHHHhhhHHHHHHHHHHHHhC--CEEEEEe
Confidence            9998865321  12334567789999999999998876  4455554

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2

Probab=97.59  E-value=0.001  Score=60.36  Aligned_cols=114  Identities=17%  Similarity=0.112  Sum_probs=71.3

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc--hhHHHHHhcCCCCCeEEEEe-CCCc---HHhhh-------C
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFL-GQPQ---LENAL-------T  109 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~--~g~~~dl~~~~~~~~v~~~~-~~~d---~~~al-------~  109 (354)
                      +++.|+||+|.+|..++..|+..|.  +|++.|++..  .....++........+..+. +-+|   +++++       .
T Consensus         8 k~vlVTGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   85 (267)
T 2gdz_A            8 KVALVTGAAQGIGRAFAEALLLKGA--KVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHFG   85 (267)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CEEEEECCCCcHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCCHHHHHHHHHHHHHHcC
Confidence            4899999999999999999999997  8999998752  22223343221112233221 1122   22333       3


Q ss_pred             CCcEEEEcCCCCCCCCCCHHHHHHHHHH----HHHHHHHHHhhhC--CCeEEEEecC
Q 018512          110 GMDLVIIPAGVPRKPGMTRDDLFNINAG----IVRTLCEGIAKCC--PNATVNLISN  160 (354)
Q Consensus       110 ~aDvVIi~ag~~~~~g~~r~d~~~~n~~----~~~~i~~~i~~~~--p~a~viv~tN  160 (354)
                      ..|+||+.||...  .......+..|+.    ..+.+.+.+++..  +.+.|+++|.
T Consensus        86 ~id~lv~~Ag~~~--~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~iv~isS  140 (267)
T 2gdz_A           86 RLDILVNNAGVNN--EKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSS  140 (267)
T ss_dssp             CCCEEEECCCCCC--SSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECC
T ss_pred             CCCEEEECCCCCC--hhhHHHHHhHHHHHHHHHHHHHHHHHHhccCCCCCEEEEeCC
Confidence            5799999998653  2234455666755    5667777776653  2567777764

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=97.59  E-value=0.00085  Score=60.94  Aligned_cols=149  Identities=19%  Similarity=0.206  Sum_probs=84.0

Q ss_pred             CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCCCCeEEEEe-CCCc---HHhhh------
Q 018512           41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQ---LENAL------  108 (354)
Q Consensus        41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~~~~v~~~~-~~~d---~~~al------  108 (354)
                      +.+++.|+||+|.+|.+++..|+..|.  +|++.|++.  ......++.... ...+..+. +-+|   .++++      
T Consensus         9 ~~k~vlVTGas~gIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~   85 (262)
T 3pk0_A            9 QGRSVVVTGGTKGIGRGIATVFARAGA--NVAVAGRSTADIDACVADLDQLG-SGKVIGVQTDVSDRAQCDALAGRAVEE   85 (262)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHTTS-SSCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhhC-CCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            345899999999999999999999998  899999976  233344555432 12233321 1122   22222      


Q ss_pred             -CCCcEEEEcCCCCCCC---CCCH---HHHHHHHHHHHHH----HHHHHhhhCCCeEEEEecCCCCCchHHHHHHHHHhC
Q 018512          109 -TGMDLVIIPAGVPRKP---GMTR---DDLFNINAGIVRT----LCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAG  177 (354)
Q Consensus       109 -~~aDvVIi~ag~~~~~---g~~r---~d~~~~n~~~~~~----i~~~i~~~~p~a~viv~tNPv~~~~~~~~~~~~~~~  177 (354)
                       ...|++|+.||.....   ..+.   ...+..|+.....    ..+.+++.. .+.||++|.-....           .
T Consensus        86 ~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-~g~iv~isS~~~~~-----------~  153 (262)
T 3pk0_A           86 FGGIDVVCANAGVFPDAPLATMTPEQLNGIFAVNVNGTFYAVQACLDALIASG-SGRVVLTSSITGPI-----------T  153 (262)
T ss_dssp             HSCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHS-SCEEEEECCSBTTT-----------B
T ss_pred             hCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEechhhcc-----------C
Confidence             3899999999865321   1222   2335566555444    444444434 45556655432211           1


Q ss_pred             CCCCCCEEEeccchHHHHHHHHHHHhC
Q 018512          178 TYDPKKLLGVTMLDVVRANTFVAEVLG  204 (354)
Q Consensus       178 ~~p~~kviG~t~ld~~r~~~~la~~l~  204 (354)
                      +.|..-.++.+......+.+.+|..++
T Consensus       154 ~~~~~~~Y~asK~a~~~l~~~la~e~~  180 (262)
T 3pk0_A          154 GYPGWSHYGATKAAQLGFMRTAAIELA  180 (262)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHHHHHHHG
T ss_pred             CCCCChhhHHHHHHHHHHHHHHHHHHH
Confidence            233322334443334556677777753

>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}

Probab=97.59  E-value=6.2e-05  Score=71.37  Aligned_cols=98  Identities=20%  Similarity=0.258  Sum_probs=64.2

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCC-----CCeEEE-EeCCCcHHhhhCCCcEEE
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDT-----GAVVRG-FLGQPQLENALTGMDLVI  115 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~-----~~~v~~-~~~~~d~~~al~~aDvVI  115 (354)
                      .|||+|||+ |.+|..++..|...|+  +|.++|+++   ....+.....     ...... +..+++.+ ++.++|+||
T Consensus         3 ~mkI~IiGa-G~~G~~~a~~L~~~g~--~V~~~~r~~---~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~D~Vi   75 (335)
T 3ghy_A            3 LTRICIVGA-GAVGGYLGARLALAGE--AINVLARGA---TLQALQTAGLRLTEDGATHTLPVRATHDAA-ALGEQDVVI   75 (335)
T ss_dssp             CCCEEEESC-CHHHHHHHHHHHHTTC--CEEEECCHH---HHHHHHHTCEEEEETTEEEEECCEEESCHH-HHCCCSEEE
T ss_pred             CCEEEEECc-CHHHHHHHHHHHHCCC--EEEEEEChH---HHHHHHHCCCEEecCCCeEEEeeeEECCHH-HcCCCCEEE
Confidence            579999999 9999999999999887  899999843   1122222110     000000 11124554 479999999


Q ss_pred             EcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecCCC
Q 018512          116 IPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPV  162 (354)
Q Consensus       116 i~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~-p~a~viv~tNPv  162 (354)
                      ++...                ..+.++++.+..+- |+..|+.++|.+
T Consensus        76 lavk~----------------~~~~~~~~~l~~~l~~~~~iv~~~nGi  107 (335)
T 3ghy_A           76 VAVKA----------------PALESVAAGIAPLIGPGTCVVVAMNGV  107 (335)
T ss_dssp             ECCCH----------------HHHHHHHGGGSSSCCTTCEEEECCSSS
T ss_pred             EeCCc----------------hhHHHHHHHHHhhCCCCCEEEEECCCC
Confidence            98421                13456666676654 688888889995

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2

Probab=97.59  E-value=0.00035  Score=63.24  Aligned_cols=105  Identities=15%  Similarity=0.165  Sum_probs=61.6

Q ss_pred             CCCCCeEEEEcCCCchHHHHHHHHHhCC---CCcEEEEEecCCch-hHHHHHhcCCCCCeEEEEe----CCCcHHhhhC-
Q 018512           39 GAAGFKVAILGAAGGIGQPLAMLMKINP---LVSVLHLYDVVNTP-GVTADISHMDTGAVVRGFL----GQPQLENALT-  109 (354)
Q Consensus        39 ~~~~~kI~IiGa~G~vG~~~a~~l~~~~---~~~ei~L~D~~~~~-g~~~dl~~~~~~~~v~~~~----~~~d~~~al~-  109 (354)
                      ..++++|.|+||+|.+|+.++..|+..|   .  +|+++|++... ....++....  ..+..+.    ...++.++++ 
T Consensus        18 ~~~~k~vlITGasggIG~~la~~L~~~G~~~~--~V~~~~r~~~~~~~~~~l~~~~--~~~~~~~~Dl~~~~~v~~~~~~   93 (267)
T 1sny_A           18 GSHMNSILITGCNRGLGLGLVKALLNLPQPPQ--HLFTTCRNREQAKELEDLAKNH--SNIHILEIDLRNFDAYDKLVAD   93 (267)
T ss_dssp             --CCSEEEESCCSSHHHHHHHHHHHTSSSCCS--EEEEEESCTTSCHHHHHHHHHC--TTEEEEECCTTCGGGHHHHHHH
T ss_pred             CCCCCEEEEECCCCcHHHHHHHHHHhcCCCCc--EEEEEecChhhhHHHHHhhccC--CceEEEEecCCChHHHHHHHHH
Confidence            4445689999999999999999999988   5  89999998621 1223332211  1122211    1123334444 


Q ss_pred             --------CCcEEEEcCCCCCCCC----CC---HHHHHHHHHHHHHHHHHHHh
Q 018512          110 --------GMDLVIIPAGVPRKPG----MT---RDDLFNINAGIVRTLCEGIA  147 (354)
Q Consensus       110 --------~aDvVIi~ag~~~~~g----~~---r~d~~~~n~~~~~~i~~~i~  147 (354)
                              ..|+||++||.....+    .+   ....+..|+.....+.+.+.
T Consensus        94 ~~~~~g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~  146 (267)
T 1sny_A           94 IEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACL  146 (267)
T ss_dssp             HHHHHGGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred             HHHhcCCCCccEEEECCCcCCCccccccCCHHHHHHHHhhhchHHHHHHHHHH
Confidence                    7999999998754111    12   22345556555555444443

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*

Probab=97.58  E-value=0.00028  Score=64.78  Aligned_cols=115  Identities=16%  Similarity=0.157  Sum_probs=70.2

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCCCCeEEEEe-CCCc---HHhhh-------
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQ---LENAL-------  108 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~~~~v~~~~-~~~d---~~~al-------  108 (354)
                      .+++.|+||+|.+|..++..|+..|.  +|++.|+++  ......++....  ..+..+. +-+|   .++++       
T Consensus        22 ~k~vlVTGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~~~   97 (277)
T 2rhc_B           22 SEVALVTGATSGIGLEIARRLGKEGL--RVFVCARGEEGLRTTLKELREAG--VEADGRTCDVRSVPEIEALVAAVVERY   97 (277)
T ss_dssp             SCEEEEETCSSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcC--CceEEEECCCCCHHHHHHHHHHHHHHh
Confidence            35899999999999999999999987  899999976  222233343222  1222211 1122   22223       


Q ss_pred             CCCcEEEEcCCCCCCCC---CC---HHHHHHHHHHHHHHHHHHHhhh-----CCCeEEEEecC
Q 018512          109 TGMDLVIIPAGVPRKPG---MT---RDDLFNINAGIVRTLCEGIAKC-----CPNATVNLISN  160 (354)
Q Consensus       109 ~~aDvVIi~ag~~~~~g---~~---r~d~~~~n~~~~~~i~~~i~~~-----~p~a~viv~tN  160 (354)
                      .+.|+||+.||......   .+   ....+..|+.....+.+.+.+.     ...+.||++|.
T Consensus        98 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~m~~~~~g~iv~isS  160 (277)
T 2rhc_B           98 GPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIAS  160 (277)
T ss_dssp             CSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTCHHHHTEEEEEEECC
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhChhhHhhcCCeEEEEECc
Confidence            37899999998753211   12   2345567777766666665443     12466776654

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*

Probab=97.58  E-value=0.00021  Score=63.83  Aligned_cols=144  Identities=17%  Similarity=0.145  Sum_probs=80.3

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCch--hHHHHHhcCCCCCeEEEEeCCCc---HHhhhC---CCcE
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP--GVTADISHMDTGAVVRGFLGQPQ---LENALT---GMDL  113 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~--g~~~dl~~~~~~~~v~~~~~~~d---~~~al~---~aDv  113 (354)
                      .++|.|+||+|.+|.+++..|+..|.  +|+++|++...  ....++.    ....... +-+|   ++++++   ..|+
T Consensus         7 ~k~vlITGasggiG~~~a~~l~~~G~--~V~~~~r~~~~~~~~~~~~~----~~~~~~~-D~~~~~~~~~~~~~~~~id~   79 (244)
T 3d3w_A            7 GRRVLVTGAGKGIGRGTVQALHATGA--RVVAVSRTQADLDSLVRECP----GIEPVCV-DLGDWEATERALGSVGPVDL   79 (244)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHST----TCEEEEC-CTTCHHHHHHHHTTCCCCCE
T ss_pred             CcEEEEECCCcHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHcC----CCCEEEE-eCCCHHHHHHHHHHcCCCCE
Confidence            45899999999999999999999987  89999987521  1111111    1111111 1122   334443   5899


Q ss_pred             EEEcCCCCCCCC---CC---HHHHHHHHHHHHHHHHHH----HhhhCCCeEEEEecCCCCCchHHHHHHHHHhCCCCCCC
Q 018512          114 VIIPAGVPRKPG---MT---RDDLFNINAGIVRTLCEG----IAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKK  183 (354)
Q Consensus       114 VIi~ag~~~~~g---~~---r~d~~~~n~~~~~~i~~~----i~~~~p~a~viv~tNPv~~~~~~~~~~~~~~~~~p~~k  183 (354)
                      ||+.||......   .+   ....+..|+.....+.+.    +.+....+.|+++|......            +.++.-
T Consensus        80 vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~------------~~~~~~  147 (244)
T 3d3w_A           80 LVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQR------------AVTNHS  147 (244)
T ss_dssp             EEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTS------------CCTTBH
T ss_pred             EEECCccCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEeCchhhcc------------CCCCCc
Confidence            999998653211   12   233456676665444444    44334356677766432111            223222


Q ss_pred             EEEeccchHHHHHHHHHHHhC
Q 018512          184 LLGVTMLDVVRANTFVAEVLG  204 (354)
Q Consensus       184 viG~t~ld~~r~~~~la~~l~  204 (354)
                      .++.+......+.+.+++.++
T Consensus       148 ~Y~~sK~a~~~~~~~la~e~~  168 (244)
T 3d3w_A          148 VYCSTKGALDMLTKVMALELG  168 (244)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHG
T ss_pred             hHHHHHHHHHHHHHHHHHHhc
Confidence            344444344556666776653

>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}

Probab=97.58  E-value=0.00016  Score=67.48  Aligned_cols=67  Identities=18%  Similarity=0.147  Sum_probs=48.5

Q ss_pred             CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcC
Q 018512           41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA  118 (354)
Q Consensus        41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~a  118 (354)
                      .+|||+|||+ |.+|..++..|...|+  +|+++|+++..  ...+.....  .. .   ++++.+++++||+||++.
T Consensus         6 ~~~~I~iIG~-G~mG~~~a~~l~~~G~--~V~~~dr~~~~--~~~~~~~g~--~~-~---~~~~~e~~~~aDvvi~~v   72 (303)
T 3g0o_A            6 TDFHVGIVGL-GSMGMGAARSCLRAGL--STWGADLNPQA--CANLLAEGA--CG-A---AASAREFAGVVDALVILV   72 (303)
T ss_dssp             -CCEEEEECC-SHHHHHHHHHHHHTTC--EEEEECSCHHH--HHHHHHTTC--SE-E---ESSSTTTTTTCSEEEECC
T ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCC--eEEEEECCHHH--HHHHHHcCC--cc-c---cCCHHHHHhcCCEEEEEC
Confidence            3479999999 9999999999999998  99999997521  222332221  11 1   134568899999999985

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}

Probab=97.58  E-value=0.00042  Score=63.23  Aligned_cols=96  Identities=13%  Similarity=0.013  Sum_probs=60.6

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEe-CCCcHHhhhCCCcEEEEcCCC
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFL-GQPQLENALTGMDLVIIPAGV  120 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~-~~~d~~~al~~aDvVIi~ag~  120 (354)
                      +|||.|+|| |++|++++..|+..|+  +|+.++++.....  .+....    ++.+. +-.|++  ++++|+||++|+.
T Consensus         5 ~~~ilVtGa-G~iG~~l~~~L~~~g~--~V~~~~r~~~~~~--~~~~~~----~~~~~~D~~d~~--~~~~d~vi~~a~~   73 (286)
T 3ius_A            5 TGTLLSFGH-GYTARVLSRALAPQGW--RIIGTSRNPDQME--AIRASG----AEPLLWPGEEPS--LDGVTHLLISTAP   73 (286)
T ss_dssp             CCEEEEETC-CHHHHHHHHHHGGGTC--EEEEEESCGGGHH--HHHHTT----EEEEESSSSCCC--CTTCCEEEECCCC
T ss_pred             cCcEEEECC-cHHHHHHHHHHHHCCC--EEEEEEcChhhhh--hHhhCC----CeEEEecccccc--cCCCCEEEECCCc
Confidence            469999998 9999999999999887  9999998763221  122211    22221 223443  8999999999875


Q ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHHHhhh--CCCeEEEEec
Q 018512          121 PRKPGMTRDDLFNINAGIVRTLCEGIAKC--CPNATVNLIS  159 (354)
Q Consensus       121 ~~~~g~~r~d~~~~n~~~~~~i~~~i~~~--~p~a~viv~t  159 (354)
                      ....           .+..+.+++.+++.  ....+|.+.|
T Consensus        74 ~~~~-----------~~~~~~l~~a~~~~~~~~~~~v~~Ss  103 (286)
T 3ius_A           74 DSGG-----------DPVLAALGDQIAARAAQFRWVGYLST  103 (286)
T ss_dssp             BTTB-----------CHHHHHHHHHHHHTGGGCSEEEEEEE
T ss_pred             cccc-----------cHHHHHHHHHHHhhcCCceEEEEeec
Confidence            4321           12235666667663  3344444443

>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}

Probab=97.58  E-value=8.1e-05  Score=67.87  Aligned_cols=94  Identities=14%  Similarity=0.189  Sum_probs=62.0

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcE-EEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcCCC
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSV-LHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGV  120 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~e-i~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~ag~  120 (354)
                      .|||+|||+ |.+|..++..|...++  + +.++|+++...  ..+.... .  +...   .+++++++++|+||++...
T Consensus        10 ~m~i~iiG~-G~mG~~~a~~l~~~g~--~~v~~~~~~~~~~--~~~~~~~-g--~~~~---~~~~~~~~~~Dvvi~av~~   78 (266)
T 3d1l_A           10 DTPIVLIGA-GNLATNLAKALYRKGF--RIVQVYSRTEESA--RELAQKV-E--AEYT---TDLAEVNPYAKLYIVSLKD   78 (266)
T ss_dssp             GCCEEEECC-SHHHHHHHHHHHHHTC--CEEEEECSSHHHH--HHHHHHT-T--CEEE---SCGGGSCSCCSEEEECCCH
T ss_pred             CCeEEEEcC-CHHHHHHHHHHHHCCC--eEEEEEeCCHHHH--HHHHHHc-C--Ccee---CCHHHHhcCCCEEEEecCH
Confidence            479999999 9999999999988776  5 89999875211  1122110 1  2222   3566788999999998420


Q ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecCCC
Q 018512          121 PRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPV  162 (354)
Q Consensus       121 ~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~-p~a~viv~tNPv  162 (354)
                               +       .+.++++.+.+.. ++.+|+..|+-.
T Consensus        79 ---------~-------~~~~v~~~l~~~~~~~~ivv~~s~~~  105 (266)
T 3d1l_A           79 ---------S-------AFAELLQGIVEGKREEALMVHTAGSI  105 (266)
T ss_dssp             ---------H-------HHHHHHHHHHTTCCTTCEEEECCTTS
T ss_pred             ---------H-------HHHHHHHHHHhhcCCCcEEEECCCCC
Confidence                     1       1255666666655 677777776543

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2

Probab=97.58  E-value=7.6e-05  Score=67.02  Aligned_cols=146  Identities=14%  Similarity=0.155  Sum_probs=82.9

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCCCCeEEEEe-CCCc---HHhhh-------
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQ---LENAL-------  108 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~~~~v~~~~-~~~d---~~~al-------  108 (354)
                      .+++.|+||+|.+|+.++..|+..|.  +|++.|++.  ......++....  ..+..+. +-+|   .++.+       
T Consensus         5 ~k~vlITGas~gIG~~~a~~l~~~G~--~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~   80 (247)
T 3lyl_A            5 EKVALVTGASRGIGFEVAHALASKGA--TVVGTATSQASAEKFENSMKEKG--FKARGLVLNISDIESIQNFFAEIKAEN   80 (247)
T ss_dssp             TCEEEESSCSSHHHHHHHHHHHHTTC--EEEEEESSHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHTT
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcC--CceEEEEecCCCHHHHHHHHHHHHHHc
Confidence            45899999999999999999999987  899999976  222333343322  2222221 1122   22222       


Q ss_pred             CCCcEEEEcCCCCCCCC---CC---HHHHHHHHHHHHHHHHHH----HhhhCCCeEEEEecCCCCCchHHHHHHHHHhCC
Q 018512          109 TGMDLVIIPAGVPRKPG---MT---RDDLFNINAGIVRTLCEG----IAKCCPNATVNLISNPVNSTVPIAAEVFKKAGT  178 (354)
Q Consensus       109 ~~aDvVIi~ag~~~~~g---~~---r~d~~~~n~~~~~~i~~~----i~~~~p~a~viv~tNPv~~~~~~~~~~~~~~~~  178 (354)
                      ...|+||++||......   .+   ....+..|+.....+.+.    +.+. ..+.|+++|....          .  .+
T Consensus        81 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~g~iv~isS~~~----------~--~~  147 (247)
T 3lyl_A           81 LAIDILVNNAGITRDNLMMRMSEDEWQSVINTNLSSIFRMSKECVRGMMKK-RWGRIISIGSVVG----------S--AG  147 (247)
T ss_dssp             CCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCTHH----------H--HC
T ss_pred             CCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCeEEEEEcchhh----------c--cC
Confidence            35799999998754321   12   233455665554444444    4433 3466776664211          0  13


Q ss_pred             CCCCCEEEeccchHHHHHHHHHHHhC
Q 018512          179 YDPKKLLGVTMLDVVRANTFVAEVLG  204 (354)
Q Consensus       179 ~p~~kviG~t~ld~~r~~~~la~~l~  204 (354)
                      .|..-.++.+......+.+.+++.++
T Consensus       148 ~~~~~~Y~~sK~a~~~~~~~la~e~~  173 (247)
T 3lyl_A          148 NPGQTNYCAAKAGVIGFSKSLAYEVA  173 (247)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHHG
T ss_pred             CCCcHHHHHHHHHHHHHHHHHHHHHH
Confidence            34333444444444556677777763

>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}

Probab=97.57  E-value=0.00012  Score=67.56  Aligned_cols=65  Identities=14%  Similarity=0.176  Sum_probs=48.4

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcC
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA  118 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~a  118 (354)
                      ++||+|||+ |.+|..++..|+..|+  +|+++|+++....  .+.+..    +..   ++++++++++||+||++.
T Consensus         1 M~~I~iiG~-G~mG~~~a~~l~~~G~--~V~~~dr~~~~~~--~~~~~g----~~~---~~~~~~~~~~advvi~~v   65 (287)
T 3pdu_A            1 MTTYGFLGL-GIMGGPMAANLVRAGF--DVTVWNRNPAKCA--PLVALG----ARQ---ASSPAEVCAACDITIAML   65 (287)
T ss_dssp             CCCEEEECC-STTHHHHHHHHHHHTC--CEEEECSSGGGGH--HHHHHT----CEE---CSCHHHHHHHCSEEEECC
T ss_pred             CCeEEEEcc-CHHHHHHHHHHHHCCC--eEEEEcCCHHHHH--HHHHCC----Cee---cCCHHHHHHcCCEEEEEc
Confidence            368999998 9999999999998887  8999999863211  111111    122   346788899999999985

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}

Probab=97.57  E-value=0.00041  Score=63.21  Aligned_cols=149  Identities=15%  Similarity=0.177  Sum_probs=84.5

Q ss_pred             CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCCCCeEEEE----eCCCcHHhh-------
Q 018512           41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGF----LGQPQLENA-------  107 (354)
Q Consensus        41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~~~~v~~~----~~~~d~~~a-------  107 (354)
                      +.+++.|+||+|.+|.+++..|+..|.  +|++.|++.  ......++.... ...+..+    ....+.+++       
T Consensus        19 ~~k~vlVTGas~gIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~   95 (266)
T 4egf_A           19 DGKRALITGATKGIGADIARAFAAAGA--RLVLSGRDVSELDAARRALGEQF-GTDVHTVAIDLAEPDAPAELARRAAEA   95 (266)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHHH-CCCEEEEECCTTSTTHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHHhc-CCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence            345899999999999999999999998  899999976  222233333210 1122221    111222222       


Q ss_pred             hCCCcEEEEcCCCCCCCC---CCH---HHHHHHHHHH----HHHHHHHHhhhCCCeEEEEecCCCCCchHHHHHHHHHhC
Q 018512          108 LTGMDLVIIPAGVPRKPG---MTR---DDLFNINAGI----VRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAG  177 (354)
Q Consensus       108 l~~aDvVIi~ag~~~~~g---~~r---~d~~~~n~~~----~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~~~~~~~~  177 (354)
                      +...|++|+.||......   .+.   ...+.-|+..    .+.+.+.+.+....+.|+++|.-....            
T Consensus        96 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~------------  163 (266)
T 4egf_A           96 FGGLDVLVNNAGISHPQPVVDTDPQLFDATIAVNLRAPALLASAVGKAMVAAGEGGAIITVASAAALA------------  163 (266)
T ss_dssp             HTSCSEEEEECCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTS------------
T ss_pred             cCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEEcchhhcc------------
Confidence            348999999998754221   122   2344556544    455556666555567777776422111            


Q ss_pred             CCCCCCEEEeccchHHHHHHHHHHHhC
Q 018512          178 TYDPKKLLGVTMLDVVRANTFVAEVLG  204 (354)
Q Consensus       178 ~~p~~kviG~t~ld~~r~~~~la~~l~  204 (354)
                      +.|..-.++.+......+.+.+|..++
T Consensus       164 ~~~~~~~Y~asK~a~~~l~~~la~e~~  190 (266)
T 4egf_A          164 PLPDHYAYCTSKAGLVMATKVLARELG  190 (266)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHHHHHHHG
T ss_pred             CCCCChHHHHHHHHHHHHHHHHHHHHh
Confidence            223222333333334456677777763

>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}

Probab=97.57  E-value=7.6e-05  Score=58.62  Aligned_cols=71  Identities=28%  Similarity=0.385  Sum_probs=48.2

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCC-CCcEEEEEecCCchhHHHHHhcCCCCCeEEEEe--CCCcHHhhhCCCcEEEEcC
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINP-LVSVLHLYDVVNTPGVTADISHMDTGAVVRGFL--GQPQLENALTGMDLVIIPA  118 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~-~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~--~~~d~~~al~~aDvVIi~a  118 (354)
                      ++||+|+|+ |.+|+.++..|...| .  +|+++|+++...  ..+.+..  .......  ...++.++++++|+||.++
T Consensus         5 ~~~v~I~G~-G~iG~~~~~~l~~~g~~--~v~~~~r~~~~~--~~~~~~~--~~~~~~d~~~~~~~~~~~~~~d~vi~~~   77 (118)
T 3ic5_A            5 RWNICVVGA-GKIGQMIAALLKTSSNY--SVTVADHDLAAL--AVLNRMG--VATKQVDAKDEAGLAKALGGFDAVISAA   77 (118)
T ss_dssp             CEEEEEECC-SHHHHHHHHHHHHCSSE--EEEEEESCHHHH--HHHHTTT--CEEEECCTTCHHHHHHHTTTCSEEEECS
T ss_pred             cCeEEEECC-CHHHHHHHHHHHhCCCc--eEEEEeCCHHHH--HHHHhCC--CcEEEecCCCHHHHHHHHcCCCEEEECC
Confidence            469999999 999999999999888 5  899999975221  1222211  1111111  1123557789999999997


Q ss_pred             C
Q 018512          119 G  119 (354)
Q Consensus       119 g  119 (354)
                      +
T Consensus        78 ~   78 (118)
T 3ic5_A           78 P   78 (118)
T ss_dssp             C
T ss_pred             C
Confidence            4

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*

Probab=97.57  E-value=0.00023  Score=65.01  Aligned_cols=116  Identities=15%  Similarity=0.074  Sum_probs=68.5

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEec-CC--chhHHHHHhcCCCCCeEEEE----eCC----CcHHhhh--
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDV-VN--TPGVTADISHMDTGAVVRGF----LGQ----PQLENAL--  108 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~-~~--~~g~~~dl~~~~~~~~v~~~----~~~----~d~~~al--  108 (354)
                      .+++.|+||+|.+|..++..|+..|.  +|+++|+ +.  ......++.... ...+..+    ...    .+.++++  
T Consensus        11 ~k~~lVTGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~~   87 (276)
T 1mxh_A           11 CPAAVITGGARRIGHSIAVRLHQQGF--RVVVHYRHSEGAAQRLVAELNAAR-AGSAVLCKGDLSLSSSLLDCCEDIIDC   87 (276)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHTTC--EEEEEESSCHHHHHHHHHHHHHHS-TTCEEEEECCCSSSTTHHHHHHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEeCCChHHHHHHHHHHHHhc-CCceEEEeccCCCccccHHHHHHHHHH
Confidence            45899999999999999999999997  8999998 54  222223332210 1112211    111    1222233  


Q ss_pred             -----CCCcEEEEcCCCCCCCC---CC--------------HHHHHHHHHHHHHHHHHHHhhhC--CC------eEEEEe
Q 018512          109 -----TGMDLVIIPAGVPRKPG---MT--------------RDDLFNINAGIVRTLCEGIAKCC--PN------ATVNLI  158 (354)
Q Consensus       109 -----~~aDvVIi~ag~~~~~g---~~--------------r~d~~~~n~~~~~~i~~~i~~~~--p~------a~viv~  158 (354)
                           ...|++|+.||......   .+              ....+..|+.....+.+.+.++.  ..      +.||++
T Consensus        88 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~g~iv~i  167 (276)
T 1mxh_A           88 SFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNL  167 (276)
T ss_dssp             HHHHHSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEEEEE
T ss_pred             HHHhcCCCCEEEECCCCCCCCCccccCcccccccccchHHHHHHHHHhccHHHHHHHHHHHHHHhcCCCCCCCCcEEEEE
Confidence                 37899999998643211   11              22345667776666666665542  22      677777


Q ss_pred             cC
Q 018512          159 SN  160 (354)
Q Consensus       159 tN  160 (354)
                      |.
T Consensus       168 sS  169 (276)
T 1mxh_A          168 CD  169 (276)
T ss_dssp             CC
T ss_pred             Cc
Confidence            64

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*

Probab=97.56  E-value=0.00023  Score=64.46  Aligned_cols=114  Identities=16%  Similarity=0.178  Sum_probs=67.4

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCCCCeEEEEe-CCCc---HHhhh-------
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQ---LENAL-------  108 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~~~~v~~~~-~~~d---~~~al-------  108 (354)
                      .++|.|+||+|.+|.+++..|+..|.  +|++.|++.  ......++....  ..+..+. +-+|   .++++       
T Consensus        14 ~k~vlVTGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~   89 (260)
T 2zat_A           14 NKVALVTASTDGIGLAIARRLAQDGA--HVVVSSRKQENVDRTVATLQGEG--LSVTGTVCHVGKAEDRERLVAMAVNLH   89 (260)
T ss_dssp             TCEEEESSCSSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcC--CceEEEEccCCCHHHHHHHHHHHHHHc
Confidence            45899999999999999999999997  899999875  222233343222  1222221 1122   22333       


Q ss_pred             CCCcEEEEcCCCCCCC----CCC---HHHHHHHHHHHHHHH----HHHHhhhCCCeEEEEecC
Q 018512          109 TGMDLVIIPAGVPRKP----GMT---RDDLFNINAGIVRTL----CEGIAKCCPNATVNLISN  160 (354)
Q Consensus       109 ~~aDvVIi~ag~~~~~----g~~---r~d~~~~n~~~~~~i----~~~i~~~~p~a~viv~tN  160 (354)
                      .+.|+||+.||.....    ..+   ....+..|+.....+    .+.+++. ..+.||++|.
T Consensus        90 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~-~~g~iv~isS  151 (260)
T 2zat_A           90 GGVDILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLMTKAVVPEMEKR-GGGSVLIVSS  151 (260)
T ss_dssp             SCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-TCEEEEEECC
T ss_pred             CCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCCEEEEEec
Confidence            3899999999864211    122   233455666555444    4444443 3456666653

>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}

Probab=97.56  E-value=0.00018  Score=67.35  Aligned_cols=114  Identities=16%  Similarity=0.196  Sum_probs=70.8

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCC-----CCCeEEE--EeCCCcHHhhhCCCcEEE
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMD-----TGAVVRG--FLGQPQLENALTGMDLVI  115 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~-----~~~~v~~--~~~~~d~~~al~~aDvVI  115 (354)
                      |||+|||+ |.+|..++..|...|.  +|.++|+++.    ..+....     .......  ...+++. +++.++|+||
T Consensus         3 mkI~IiGa-GaiG~~~a~~L~~~g~--~V~~~~r~~~----~~i~~~g~~~~~~~g~~~~~~~~~~~~~-~~~~~~D~vi   74 (312)
T 3hn2_A            3 LRIAIVGA-GALGLYYGALLQRSGE--DVHFLLRRDY----EAIAGNGLKVFSINGDFTLPHVKGYRAP-EEIGPMDLVL   74 (312)
T ss_dssp             -CEEEECC-STTHHHHHHHHHHTSC--CEEEECSTTH----HHHHHTCEEEEETTCCEEESCCCEESCH-HHHCCCSEEE
T ss_pred             CEEEEECc-CHHHHHHHHHHHHCCC--eEEEEEcCcH----HHHHhCCCEEEcCCCeEEEeeceeecCH-HHcCCCCEEE
Confidence            79999999 9999999999999887  8999999752    1122111     0011110  0012344 4578999999


Q ss_pred             EcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecCCCCCchHHHHHHHHHhCCCCCCCEEEe
Q 018512          116 IPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV  187 (354)
Q Consensus       116 i~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~-p~a~viv~tNPv~~~~~~~~~~~~~~~~~p~~kviG~  187 (354)
                      ++.-..                .+.++++.++.+- ++..|+.+.|-++....     +.+.  +|..+|++-
T Consensus        75 lavk~~----------------~~~~~l~~l~~~l~~~~~iv~l~nGi~~~~~-----l~~~--~~~~~v~~~  124 (312)
T 3hn2_A           75 VGLKTF----------------ANSRYEELIRPLVEEGTQILTLQNGLGNEEA-----LATL--FGAERIIGG  124 (312)
T ss_dssp             ECCCGG----------------GGGGHHHHHGGGCCTTCEEEECCSSSSHHHH-----HHHH--TCGGGEEEE
T ss_pred             EecCCC----------------CcHHHHHHHHhhcCCCCEEEEecCCCCcHHH-----HHHH--CCCCcEEEE
Confidence            984211                1224455565544 67888888898875532     2333  566677654

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}

Probab=97.56  E-value=0.00026  Score=64.17  Aligned_cols=147  Identities=18%  Similarity=0.155  Sum_probs=83.4

Q ss_pred             CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCCCCeEEEEe-CCCc---HHhhh------
Q 018512           41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQ---LENAL------  108 (354)
Q Consensus        41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~~~~v~~~~-~~~d---~~~al------  108 (354)
                      +.+++.|+||+|.+|.+++..|+..|.  +|++.|++.  ......++....  ..+..+. +-+|   .++.+      
T Consensus        11 ~~k~vlVTGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~~   86 (256)
T 3gaf_A           11 NDAVAIVTGAAAGIGRAIAGTFAKAGA--SVVVTDLKSEGAEAVAAAIRQAG--GKAIGLECNVTDEQHREAVIKAALDQ   86 (256)
T ss_dssp             TTCEEEECSCSSHHHHHHHHHHHHHTC--EEEEEESSHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcC--CcEEEEECCCCCHHHHHHHHHHHHHH
Confidence            345899999999999999999999998  899999976  233333444322  2222221 1122   22223      


Q ss_pred             -CCCcEEEEcCCCCCCC--CCCH---HHHHHHHHHHHHHHHHH----HhhhCCCeEEEEecCCCCCchHHHHHHHHHhCC
Q 018512          109 -TGMDLVIIPAGVPRKP--GMTR---DDLFNINAGIVRTLCEG----IAKCCPNATVNLISNPVNSTVPIAAEVFKKAGT  178 (354)
Q Consensus       109 -~~aDvVIi~ag~~~~~--g~~r---~d~~~~n~~~~~~i~~~----i~~~~p~a~viv~tNPv~~~~~~~~~~~~~~~~  178 (354)
                       ...|++|+.||.....  ..+.   ...+.-|+.....+.+.    +++. ..+.||++|......            +
T Consensus        87 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-~~g~iv~isS~~~~~------------~  153 (256)
T 3gaf_A           87 FGKITVLVNNAGGGGPKPFDMPMSDFEWAFKLNLFSLFRLSQLAAPHMQKA-GGGAILNISSMAGEN------------T  153 (256)
T ss_dssp             HSCCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-TCEEEEEECCGGGTC------------C
T ss_pred             cCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCcEEEEEcCHHHcC------------C
Confidence             3789999999865322  2232   23455565555454444    4433 356777776422111            2


Q ss_pred             CCCCCEEEeccchHHHHHHHHHHHhC
Q 018512          179 YDPKKLLGVTMLDVVRANTFVAEVLG  204 (354)
Q Consensus       179 ~p~~kviG~t~ld~~r~~~~la~~l~  204 (354)
                      .|..-.++.+......+.+.++..++
T Consensus       154 ~~~~~~Y~asKaa~~~~~~~la~e~~  179 (256)
T 3gaf_A          154 NVRMASYGSSKAAVNHLTRNIAFDVG  179 (256)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHHG
T ss_pred             CCCchHHHHHHHHHHHHHHHHHHHHh
Confidence            22222333333334556677777764

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}

Probab=97.56  E-value=0.00017  Score=66.20  Aligned_cols=144  Identities=11%  Similarity=0.031  Sum_probs=82.5

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCCCCeEEEEeCCCc---HHhhh-------CC
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLGQPQ---LENAL-------TG  110 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~~~~v~~~~~~~d---~~~al-------~~  110 (354)
                      +.+.|+||+|.+|..++..|+..|.  +|++.|++.  ......++..   ...... .+-+|   .++++       ..
T Consensus        29 k~~lVTGas~GIG~aia~~la~~G~--~V~~~~r~~~~~~~~~~~~~~---~~~~~~-~Dv~d~~~v~~~~~~~~~~~g~  102 (272)
T 4dyv_A           29 KIAIVTGAGSGVGRAVAVALAGAGY--GVALAGRRLDALQETAAEIGD---DALCVP-TDVTDPDSVRALFTATVEKFGR  102 (272)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHTS---CCEEEE-CCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHhCC---CeEEEE-ecCCCHHHHHHHHHHHHHHcCC
Confidence            4788999999999999999999998  899999976  2222233321   111111 11122   22333       38


Q ss_pred             CcEEEEcCCCCCCCC----CCH---HHHHHHHHHH----HHHHHHHHhhhCC-CeEEEEecCCCCCchHHHHHHHHHhCC
Q 018512          111 MDLVIIPAGVPRKPG----MTR---DDLFNINAGI----VRTLCEGIAKCCP-NATVNLISNPVNSTVPIAAEVFKKAGT  178 (354)
Q Consensus       111 aDvVIi~ag~~~~~g----~~r---~d~~~~n~~~----~~~i~~~i~~~~p-~a~viv~tNPv~~~~~~~~~~~~~~~~  178 (354)
                      .|++|..||.....+    .+.   ...+.-|+..    .+.+.+.+++..+ .+.||++|.-....            +
T Consensus       103 iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~------------~  170 (272)
T 4dyv_A          103 VDVLFNNAGTGAPAIPMEDLTFAQWKQVVDTNLTGPFLCTQEAFRVMKAQEPRGGRIINNGSISATS------------P  170 (272)
T ss_dssp             CCEEEECCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCSSTTS------------C
T ss_pred             CCEEEECCCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCCcEEEEECchhhcC------------C
Confidence            999999999753211    222   3345556555    5556666665542 57777776433221            2


Q ss_pred             CCCCCEEEeccchHHHHHHHHHHHhC
Q 018512          179 YDPKKLLGVTMLDVVRANTFVAEVLG  204 (354)
Q Consensus       179 ~p~~kviG~t~ld~~r~~~~la~~l~  204 (354)
                      .|..-.++.+......+.+.+|..++
T Consensus       171 ~~~~~~Y~asKaa~~~l~~~la~e~~  196 (272)
T 4dyv_A          171 RPYSAPYTATKHAITGLTKSTSLDGR  196 (272)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHHG
T ss_pred             CCCchHHHHHHHHHHHHHHHHHHHhC
Confidence            22222333333334456677777764

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}

Probab=97.56  E-value=0.0005  Score=62.24  Aligned_cols=115  Identities=10%  Similarity=0.074  Sum_probs=69.6

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCCCCeEEEEe-CCCc---HHhhh-------
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQ---LENAL-------  108 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~~~~v~~~~-~~~d---~~~al-------  108 (354)
                      .+++.|+||+|.+|.+++..|+..|.  +|+++|++.  ......++....  ..+..+. +-+|   .++++       
T Consensus         6 ~k~vlVTGas~gIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~~~   81 (257)
T 3imf_A            6 EKVVIITGGSSGMGKGMATRFAKEGA--RVVITGRTKEKLEEAKLEIEQFP--GQILTVQMDVRNTDDIQKMIEQIDEKF   81 (257)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHCCST--TCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcC--CcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            45899999999999999999999997  899999976  223334444322  2233221 1122   22223       


Q ss_pred             CCCcEEEEcCCCCCCC---CCCH---HHHHHHHHHHHH----HHHHHHhhhCCCeEEEEecC
Q 018512          109 TGMDLVIIPAGVPRKP---GMTR---DDLFNINAGIVR----TLCEGIAKCCPNATVNLISN  160 (354)
Q Consensus       109 ~~aDvVIi~ag~~~~~---g~~r---~d~~~~n~~~~~----~i~~~i~~~~p~a~viv~tN  160 (354)
                      ...|++|+.||.....   ..+.   ...+.-|+....    .+.+.+.+....+.|+++|.
T Consensus        82 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS  143 (257)
T 3imf_A           82 GRIDILINNAAGNFICPAEDLSVNGWNSVINIVLNGTFYCSQAIGKYWIEKGIKGNIINMVA  143 (257)
T ss_dssp             SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEECC
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhCCCcEEEEECc
Confidence            3789999999864321   1222   234555655444    44444444555666777653

>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii}

Probab=97.55  E-value=8.9e-05  Score=67.11  Aligned_cols=101  Identities=21%  Similarity=0.248  Sum_probs=68.5

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEE-EeCCCcHHhhhCC--CcEEEEcCC
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRG-FLGQPQLENALTG--MDLVIIPAG  119 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~-~~~~~d~~~al~~--aDvVIi~ag  119 (354)
                      |||.|+||+|++|++++..|+. +.  +|++++++....        . .  +.. .....++.+++++  +|+||++||
T Consensus         1 m~ilVtGatG~iG~~l~~~L~~-g~--~V~~~~r~~~~~--------~-~--~~~Dl~~~~~~~~~~~~~~~d~vi~~a~   66 (273)
T 2ggs_A            1 MRTLITGASGQLGIELSRLLSE-RH--EVIKVYNSSEIQ--------G-G--YKLDLTDFPRLEDFIIKKRPDVIINAAA   66 (273)
T ss_dssp             CCEEEETTTSHHHHHHHHHHTT-TS--CEEEEESSSCCT--------T-C--EECCTTSHHHHHHHHHHHCCSEEEECCC
T ss_pred             CEEEEECCCChhHHHHHHHHhc-CC--eEEEecCCCcCC--------C-C--ceeccCCHHHHHHHHHhcCCCEEEECCc
Confidence            6899999999999999999984 64  899999875210        0 0  111 1111234556665  999999998


Q ss_pred             CCCCC--CCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 018512          120 VPRKP--GMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  159 (354)
Q Consensus       120 ~~~~~--g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~t  159 (354)
                      .....  .....+.+..|+.....+++.+.+.+.  .++++|
T Consensus        67 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--~iv~~S  106 (273)
T 2ggs_A           67 MTDVDKCEIEKEKAYKINAEAVRHIVRAGKVIDS--YIVHIS  106 (273)
T ss_dssp             CCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTC--EEEEEE
T ss_pred             ccChhhhhhCHHHHHHHhHHHHHHHHHHHHHhCC--eEEEEe
Confidence            65321  123455678899999999999987653  455544

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}

Probab=97.55  E-value=0.00026  Score=63.88  Aligned_cols=117  Identities=15%  Similarity=0.166  Sum_probs=66.8

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc--hhHHHHHhcCCC-----CCeEEEEe-CCCc---HHhhhCC
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDT-----GAVVRGFL-GQPQ---LENALTG  110 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~--~g~~~dl~~~~~-----~~~v~~~~-~~~d---~~~al~~  110 (354)
                      .++|.|+||+|.+|..++..|+..|.  +|+++|++..  .....++.....     ...+..+. +-+|   +.+++++
T Consensus         7 ~k~vlITGasggiG~~la~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   84 (264)
T 2pd6_A            7 SALALVTGAGSGIGRAVSVRLAGEGA--TVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQADVSEARAARCLLEQ   84 (264)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESSHHHHHHHHHTC------------CCEEEECCTTSHHHHHHHHHH
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCC--EEEEEeCChHHHHHHHHHHHhcCccccccCcceEEEEecCCCHHHHHHHHHH
Confidence            45899999999999999999999987  8999998752  111222221110     01222221 1122   2333443


Q ss_pred             C--------cEEEEcCCCCCCC---CCC---HHHHHHHHHHHHHHHHHHHhhh----CCCeEEEEecC
Q 018512          111 M--------DLVIIPAGVPRKP---GMT---RDDLFNINAGIVRTLCEGIAKC----CPNATVNLISN  160 (354)
Q Consensus       111 a--------DvVIi~ag~~~~~---g~~---r~d~~~~n~~~~~~i~~~i~~~----~p~a~viv~tN  160 (354)
                      +        |+||++||.....   ..+   ....+..|+.....+.+.+.+.    ...+.||++|.
T Consensus        85 ~~~~~g~i~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS  152 (264)
T 2pd6_A           85 VQACFSRPPSVVVSCAGITQDEFLLHMSEDDWDKVIAVNLKGTFLVTQAAAQALVSNGCRGSIINISS  152 (264)
T ss_dssp             HHHHHSSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECC
T ss_pred             HHHHhCCCCeEEEECCCcCCCcchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCceEEEECC
Confidence            3        9999999875421   112   2334566766555555554433    32566777664

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2

Probab=97.55  E-value=0.00076  Score=61.29  Aligned_cols=117  Identities=21%  Similarity=0.202  Sum_probs=68.6

Q ss_pred             CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc--hhHHHHHhcCCCCCeEEEEe-CCCc---HHhhhC-----
Q 018512           41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFL-GQPQ---LENALT-----  109 (354)
Q Consensus        41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~--~g~~~dl~~~~~~~~v~~~~-~~~d---~~~al~-----  109 (354)
                      +.+++.|+||+|.+|..++..|+..|.  +|++.|++..  .....++........+..+. +-+|   ++++++     
T Consensus        12 ~~k~vlVTGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~   89 (267)
T 1iy8_A           12 TDRVVLITGGGSGLGRATAVRLAAEGA--KLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTER   89 (267)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHHH
Confidence            345899999999999999999999987  8999999762  22223332210011222221 1122   223333     


Q ss_pred             --CCcEEEEcCCCCCCCC----CC---HHHHHHHHHH----HHHHHHHHHhhhCCCeEEEEecC
Q 018512          110 --GMDLVIIPAGVPRKPG----MT---RDDLFNINAG----IVRTLCEGIAKCCPNATVNLISN  160 (354)
Q Consensus       110 --~aDvVIi~ag~~~~~g----~~---r~d~~~~n~~----~~~~i~~~i~~~~p~a~viv~tN  160 (354)
                        ..|+||+.||.....+    .+   ....+.-|+.    ..+.+.+.+++.. .+.||++|.
T Consensus        90 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS  152 (267)
T 1iy8_A           90 FGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQG-SGMVVNTAS  152 (267)
T ss_dssp             HSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECC
T ss_pred             cCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CCEEEEEcc
Confidence              7899999998753311    12   2234455653    4456666666554 455666653

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*

Probab=97.55  E-value=0.00058  Score=61.81  Aligned_cols=155  Identities=13%  Similarity=0.072  Sum_probs=86.0

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCCCCeEEEEe-CCCc---HHhhh-------
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQ---LENAL-------  108 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~~~~v~~~~-~~~d---~~~al-------  108 (354)
                      .++|.|+||+|.+|.+++..|+..|.  +|++.|+++  ......++....  ..+..+. +-+|   .++++       
T Consensus         9 ~k~vlVTGas~giG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~   84 (260)
T 2ae2_A            9 GCTALVTGGSRGIGYGIVEELASLGA--SVYTCSRNQKELNDCLTQWRSKG--FKVEASVCDLSSRSERQELMNTVANHF   84 (260)
T ss_dssp             TCEEEEESCSSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHTT--CEEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcC--CcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            45899999999999999999999997  899999875  222233343221  2232221 1122   22223       


Q ss_pred             -CCCcEEEEcCCCCCCC---CCC---HHHHHHHHHHHHHHHHHHH----hhhCCCeEEEEecCCCCCchHHHHHHHHHhC
Q 018512          109 -TGMDLVIIPAGVPRKP---GMT---RDDLFNINAGIVRTLCEGI----AKCCPNATVNLISNPVNSTVPIAAEVFKKAG  177 (354)
Q Consensus       109 -~~aDvVIi~ag~~~~~---g~~---r~d~~~~n~~~~~~i~~~i----~~~~p~a~viv~tNPv~~~~~~~~~~~~~~~  177 (354)
                       ...|++|+.||.....   ..+   ....+..|+.....+.+.+    ++. ..+.||++|.-...            .
T Consensus        85 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-~~g~iv~isS~~~~------------~  151 (260)
T 2ae2_A           85 HGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKAS-ERGNVVFISSVSGA------------L  151 (260)
T ss_dssp             TTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-SSEEEEEECCGGGT------------S
T ss_pred             CCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCcEEEEEcchhhc------------c
Confidence             5799999999865321   122   2234556766555555444    333 34666766542211            1


Q ss_pred             CCCCCCEEEeccchHHHHHHHHHHHhCCCCCCCcceEE
Q 018512          178 TYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVV  215 (354)
Q Consensus       178 ~~p~~kviG~t~ld~~r~~~~la~~l~v~~~~v~~~v~  215 (354)
                      +.|..-.++.+......+.+.++..++  +..|++.++
T Consensus       152 ~~~~~~~Y~~sK~a~~~~~~~la~e~~--~~gi~v~~v  187 (260)
T 2ae2_A          152 AVPYEAVYGATKGAMDQLTRCLAFEWA--KDNIRVNGV  187 (260)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHHHHHHTG--GGTEEEEEE
T ss_pred             CCCCcchHHHHHHHHHHHHHHHHHHHh--hcCcEEEEE
Confidence            223222333343334456666777653  334444444

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2

Probab=97.55  E-value=9.2e-05  Score=67.22  Aligned_cols=116  Identities=21%  Similarity=0.235  Sum_probs=72.1

Q ss_pred             CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEec-CC--chhHHHHHhcCCCCCeEEEEe-CCCc---HHhhhC----
Q 018512           41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDV-VN--TPGVTADISHMDTGAVVRGFL-GQPQ---LENALT----  109 (354)
Q Consensus        41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~-~~--~~g~~~dl~~~~~~~~v~~~~-~~~d---~~~al~----  109 (354)
                      +.++|.|+||+|.+|++++..|+..|.  +|++.|+ +.  ......++....  ..+..+. +-+|   +.++++    
T Consensus        20 ~~k~vlItGasggiG~~la~~l~~~G~--~v~~~~r~~~~~~~~~~~~l~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~   95 (274)
T 1ja9_A           20 AGKVALTTGAGRGIGRGIAIELGRRGA--SVVVNYGSSSKAAEEVVAELKKLG--AQGVAIQADISKPSEVVALFDKAVS   95 (274)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC--EEEEEESSCHHHHHHHHHHHHHTT--CCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC--EEEEEcCCchHHHHHHHHHHHhcC--CcEEEEEecCCCHHHHHHHHHHHHH
Confidence            446899999999999999999999987  8999998 33  222223343322  1222221 1122   333343    


Q ss_pred             ---CCcEEEEcCCCCCCC---CCC---HHHHHHHHHHHHHHHHHHHhhhCC-CeEEEEecC
Q 018512          110 ---GMDLVIIPAGVPRKP---GMT---RDDLFNINAGIVRTLCEGIAKCCP-NATVNLISN  160 (354)
Q Consensus       110 ---~aDvVIi~ag~~~~~---g~~---r~d~~~~n~~~~~~i~~~i~~~~p-~a~viv~tN  160 (354)
                         +.|+||++||.....   ..+   ..+.+..|+.....+.+.+.++.. .+.||++|.
T Consensus        96 ~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~~sS  156 (274)
T 1ja9_A           96 HFGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGGRIILTSS  156 (274)
T ss_dssp             HHSCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEEEEEEEECC
T ss_pred             HcCCCCEEEECCCCCCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCEEEEEcC
Confidence               899999999865321   112   234566788777777777665531 256666653

>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}

Probab=97.55  E-value=0.00016  Score=67.59  Aligned_cols=66  Identities=15%  Similarity=0.226  Sum_probs=49.2

Q ss_pred             CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcC
Q 018512           41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA  118 (354)
Q Consensus        41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~a  118 (354)
                      ..+||+|||. |.+|..++..|...|+  +|+++|+++..  ...+....    ...   ..++.+++++||+||++.
T Consensus         8 ~~~~IgiIG~-G~mG~~~A~~l~~~G~--~V~~~dr~~~~--~~~~~~~g----~~~---~~~~~e~~~~aDvVi~~v   73 (306)
T 3l6d_A            8 FEFDVSVIGL-GAMGTIMAQVLLKQGK--RVAIWNRSPGK--AAALVAAG----AHL---CESVKAALSASPATIFVL   73 (306)
T ss_dssp             CSCSEEEECC-SHHHHHHHHHHHHTTC--CEEEECSSHHH--HHHHHHHT----CEE---CSSHHHHHHHSSEEEECC
T ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCC--EEEEEeCCHHH--HHHHHHCC----Cee---cCCHHHHHhcCCEEEEEe
Confidence            4579999999 9999999999999998  89999997621  11222211    111   346788899999999984

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*

Probab=97.54  E-value=0.00023  Score=64.71  Aligned_cols=153  Identities=13%  Similarity=0.169  Sum_probs=88.8

Q ss_pred             CeEEEEcCC--CchHHHHHHHHHhCCCCcEEEEEecCC-chhHHHHHhcC-CCCCeEEEEeCCCc---HHhhhC------
Q 018512           43 FKVAILGAA--GGIGQPLAMLMKINPLVSVLHLYDVVN-TPGVTADISHM-DTGAVVRGFLGQPQ---LENALT------  109 (354)
Q Consensus        43 ~kI~IiGa~--G~vG~~~a~~l~~~~~~~ei~L~D~~~-~~g~~~dl~~~-~~~~~v~~~~~~~d---~~~al~------  109 (354)
                      ++|.|+||+  |.+|.+++..|+..|.  +|++.|++. ......++... .....+..  +-+|   .+++++      
T Consensus        10 k~vlVTGas~~~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~--D~~~~~~v~~~~~~~~~~~   85 (265)
T 1qsg_A           10 KRILVTGVASKLSIAYGIAQAMHREGA--ELAFTYQNDKLKGRVEEFAAQLGSDIVLQC--DVAEDASIDTMFAELGKVW   85 (265)
T ss_dssp             CEEEECCCCSTTSHHHHHHHHHHHTTC--EEEEEESSTTTHHHHHHHHHHTTCCCEEEC--CTTCHHHHHHHHHHHHTTC
T ss_pred             CEEEEECCCCCCCHHHHHHHHHHHCCC--EEEEEcCcHHHHHHHHHHHHhcCCcEEEEc--cCCCHHHHHHHHHHHHHHc
Confidence            479999998  8999999999999997  899999876 22223333221 11111111  1122   223332      


Q ss_pred             -CCcEEEEcCCCCCC-----C--C-CC---HHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecCCCCCchHHHHHHHHHh
Q 018512          110 -GMDLVIIPAGVPRK-----P--G-MT---RDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNSTVPIAAEVFKKA  176 (354)
Q Consensus       110 -~aDvVIi~ag~~~~-----~--g-~~---r~d~~~~n~~~~~~i~~~i~~~~-p~a~viv~tNPv~~~~~~~~~~~~~~  176 (354)
                       ..|+||+.||....     +  . .+   ....+..|+.....+.+.+.++. +.+.||++|.....            
T Consensus        86 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~------------  153 (265)
T 1qsg_A           86 PKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAE------------  153 (265)
T ss_dssp             SSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGT------------
T ss_pred             CCCCEEEECCCCCCccccCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEcchhhc------------
Confidence             68999999987542     1  1 22   23456778888888888877654 24667777642211            


Q ss_pred             CCCCCCCEEEeccchHHHHHHHHHHHhCCCCCCCcce
Q 018512          177 GTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVP  213 (354)
Q Consensus       177 ~~~p~~kviG~t~ld~~r~~~~la~~l~v~~~~v~~~  213 (354)
                      .+.|..-.++.+......+.+.++..++  +..|++.
T Consensus       154 ~~~~~~~~Y~~sK~a~~~~~~~la~e~~--~~gi~v~  188 (265)
T 1qsg_A          154 RAIPNYNVMGLAKASLEANVRYMANAMG--PEGVRVN  188 (265)
T ss_dssp             SBCTTTTHHHHHHHHHHHHHHHHHHHHT--TTTEEEE
T ss_pred             cCCCCchHHHHHHHHHHHHHHHHHHHhh--hcCeEEE
Confidence            1223333344444444556677777764  3344433

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}

Probab=97.54  E-value=0.00048  Score=62.94  Aligned_cols=118  Identities=19%  Similarity=0.231  Sum_probs=70.1

Q ss_pred             CCCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--------------chhHHHHHhcCCCCCeEEEEe-CCCc
Q 018512           39 GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--------------TPGVTADISHMDTGAVVRGFL-GQPQ  103 (354)
Q Consensus        39 ~~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--------------~~g~~~dl~~~~~~~~v~~~~-~~~d  103 (354)
                      +-..+++.|+||+|.+|.+++..|+..|.  +|+++|++.              ......++....  ..+..+. +-+|
T Consensus        10 ~l~gk~vlVTGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~D~~~   85 (278)
T 3sx2_A           10 PLTGKVAFITGAARGQGRAHAVRLAADGA--DIIAVDLCDQIASVPYPLATPEELAATVKLVEDIG--SRIVARQADVRD   85 (278)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTC--EEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHT--CCEEEEECCTTC
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCC--eEEEEecccccccccccccchHHHHHHHHHHHhcC--CeEEEEeCCCCC
Confidence            33456899999999999999999999998  899999862              111112222211  2222221 1122


Q ss_pred             ---HHhhh-------CCCcEEEEcCCCCCCCC--CCHHHHHHHHHHH----HHHHHHHHhhhCCCeEEEEecC
Q 018512          104 ---LENAL-------TGMDLVIIPAGVPRKPG--MTRDDLFNINAGI----VRTLCEGIAKCCPNATVNLISN  160 (354)
Q Consensus       104 ---~~~al-------~~aDvVIi~ag~~~~~g--~~r~d~~~~n~~~----~~~i~~~i~~~~p~a~viv~tN  160 (354)
                         .++++       ...|++|+.||......  ......+.-|+..    ++.+.+.+.+....+.||++|.
T Consensus        86 ~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS  158 (278)
T 3sx2_A           86 RESLSAALQAGLDELGRLDIVVANAGIAPMSAGDDGWHDVIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISS  158 (278)
T ss_dssp             HHHHHHHHHHHHHHHCCCCEEEECCCCCCCSSTHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECC
T ss_pred             HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEcc
Confidence               22333       37899999998753221  1123345556544    4445555665555677777764

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*

Probab=97.54  E-value=0.00019  Score=64.82  Aligned_cols=145  Identities=17%  Similarity=0.173  Sum_probs=83.5

Q ss_pred             CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc--hhHHHHHhcCCCCCeEEEEe-CCC---cHHhhh------
Q 018512           41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFL-GQP---QLENAL------  108 (354)
Q Consensus        41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~--~g~~~dl~~~~~~~~v~~~~-~~~---d~~~al------  108 (354)
                      +.+++.|+||+|.+|..++..|+..|.  +|++.|++..  .....++.     ..+..+. +-+   +.++++      
T Consensus         5 ~gk~vlVTGas~gIG~a~a~~l~~~G~--~V~~~~r~~~~~~~~~~~~~-----~~~~~~~~Dv~~~~~v~~~~~~~~~~   77 (247)
T 3rwb_A            5 AGKTALVTGAAQGIGKAIAARLAADGA--TVIVSDINAEGAKAAAASIG-----KKARAIAADISDPGSVKALFAEIQAL   77 (247)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC--EEEEECSCHHHHHHHHHHHC-----TTEEECCCCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHhC-----CceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            345899999999999999999999998  8999999762  22222331     1111110 111   222223      


Q ss_pred             -CCCcEEEEcCCCCCCCC---CCH---HHHHHHHHHH----HHHHHHHHhhhCCCeEEEEecCCCCCchHHHHHHHHHhC
Q 018512          109 -TGMDLVIIPAGVPRKPG---MTR---DDLFNINAGI----VRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAG  177 (354)
Q Consensus       109 -~~aDvVIi~ag~~~~~g---~~r---~d~~~~n~~~----~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~~~~~~~~  177 (354)
                       ...|++|+.||......   .+.   ...+..|+..    .+...+.+++..+.+.|+++|.-..          ..  
T Consensus        78 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~----------~~--  145 (247)
T 3rwb_A           78 TGGIDILVNNASIVPFVAWDDVDLDHWRKIIDVNLTGTFIVTRAGTDQMRAAGKAGRVISIASNTF----------FA--  145 (247)
T ss_dssp             HSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHH----------HH--
T ss_pred             CCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCcEEEEECchhh----------cc--
Confidence             37999999998753221   222   2345556554    4444555776665677777764210          01  


Q ss_pred             CCCCCCEEEeccchHHHHHHHHHHHhC
Q 018512          178 TYDPKKLLGVTMLDVVRANTFVAEVLG  204 (354)
Q Consensus       178 ~~p~~kviG~t~ld~~r~~~~la~~l~  204 (354)
                      +.|..-.++.+...-..+.+.+|..++
T Consensus       146 ~~~~~~~Y~asKaa~~~~~~~la~e~~  172 (247)
T 3rwb_A          146 GTPNMAAYVAAKGGVIGFTRALATELG  172 (247)
T ss_dssp             TCTTCHHHHHHHHHHHHHHHHHHHHHG
T ss_pred             CCCCchhhHHHHHHHHHHHHHHHHHhh
Confidence            333333344444334456677777763

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}

Probab=97.54  E-value=0.0013  Score=60.23  Aligned_cols=116  Identities=16%  Similarity=0.204  Sum_probs=70.6

Q ss_pred             CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCCCCeEEEE-eCCCc---HHhhhC-----
Q 018512           41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGF-LGQPQ---LENALT-----  109 (354)
Q Consensus        41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~~~~v~~~-~~~~d---~~~al~-----  109 (354)
                      +.+++.|+||+|.+|.+++..|+..|.  .|++.|++.  .+....++.....  .+..+ .+-+|   .+++++     
T Consensus        31 ~gk~~lVTGas~GIG~aia~~la~~G~--~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~Dl~d~~~v~~~~~~~~~~  106 (276)
T 3r1i_A           31 SGKRALITGASTGIGKKVALAYAEAGA--QVAVAARHSDALQVVADEIAGVGG--KALPIRCDVTQPDQVRGMLDQMTGE  106 (276)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC--EEEEEESSGGGGHHHHHHHHHTTC--CCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcCC--eEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            446899999999999999999999998  899999976  2333344443321  11111 11122   233333     


Q ss_pred             --CCcEEEEcCCCCCCCC---CCH---HHHHHHHHHH----HHHHHHHHhhhCCCeEEEEecC
Q 018512          110 --GMDLVIIPAGVPRKPG---MTR---DDLFNINAGI----VRTLCEGIAKCCPNATVNLISN  160 (354)
Q Consensus       110 --~aDvVIi~ag~~~~~g---~~r---~d~~~~n~~~----~~~i~~~i~~~~p~a~viv~tN  160 (354)
                        ..|++|+.||......   .+.   ...+..|+..    .+.+.+.+.+....+.|++++.
T Consensus       107 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~~g~iv~isS  169 (276)
T 3r1i_A          107 LGGIDIAVCNAGIVSVQAMLDMPLEEFQRIQDTNVTGVFLTAQAAARAMVDQGLGGTIITTAS  169 (276)
T ss_dssp             HSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECC
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEECc
Confidence              8999999998754221   222   2234556544    4455555555554577777654

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2

Probab=97.53  E-value=0.00021  Score=63.80  Aligned_cols=115  Identities=19%  Similarity=0.196  Sum_probs=67.6

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCc-----EEEEEecCC--chhHHHHHhcCCCCCeEEEEe-CCCc---HHhhh---
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVS-----VLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQ---LENAL---  108 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~-----ei~L~D~~~--~~g~~~dl~~~~~~~~v~~~~-~~~d---~~~al---  108 (354)
                      ++|.|+||+|.+|..++..|+..|...     .|++.|++.  ......++....  ..+..+. +-+|   +++++   
T Consensus         3 k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~v~~~~~~~   80 (244)
T 2bd0_A            3 HILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEG--ALTDTITADISDMADVRRLTTHI   80 (244)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTT--CEEEEEECCTTSHHHHHHHHHHH
T ss_pred             CEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHHccC--CeeeEEEecCCCHHHHHHHHHHH
Confidence            479999999999999999999877532     789999875  222233343221  2233321 1122   22333   


Q ss_pred             ----CCCcEEEEcCCCCCCCC---CC---HHHHHHHHHHHHHHHHHHH----hhhCCCeEEEEecC
Q 018512          109 ----TGMDLVIIPAGVPRKPG---MT---RDDLFNINAGIVRTLCEGI----AKCCPNATVNLISN  160 (354)
Q Consensus       109 ----~~aDvVIi~ag~~~~~g---~~---r~d~~~~n~~~~~~i~~~i----~~~~p~a~viv~tN  160 (354)
                          .+.|+||++||......   .+   ....+..|+.....+.+.+    ++. ..+.|+++|.
T Consensus        81 ~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~isS  145 (244)
T 2bd0_A           81 VERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQ-HSGHIFFITS  145 (244)
T ss_dssp             HHHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECC
T ss_pred             HHhCCCCCEEEEcCCcCCcCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhC-CCCEEEEEec
Confidence                37999999998753211   12   2334556665555555544    333 3466676664

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}

Probab=97.53  E-value=0.00059  Score=62.17  Aligned_cols=158  Identities=14%  Similarity=0.151  Sum_probs=88.3

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCCCCeEEEEe-CCCcH---H---hhhCCCc
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQL---E---NALTGMD  112 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~~~~v~~~~-~~~d~---~---~al~~aD  112 (354)
                      .+++.|+||+|.+|.+++..|+..|.  +|++.|++.  ......++........+..+. +-++.   +   +.+...|
T Consensus        10 ~k~~lVTGas~gIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~id   87 (267)
T 3t4x_A           10 GKTALVTGSTAGIGKAIATSLVAEGA--NVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQGCQDVIEKYPKVD   87 (267)
T ss_dssp             TCEEEETTCSSHHHHHHHHHHHHTTC--EEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSHHHHHHHHHHCCCCS
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCHHHHHHHHHhcCCCC
Confidence            45799999999999999999999998  899999976  222333343221112233221 11221   1   2234899


Q ss_pred             EEEEcCCCCCCCC---CCH---HHHHHHHHHH----HHHHHHHHhhhCCCeEEEEecCCCCCchHHHHHHHHHhCCCCCC
Q 018512          113 LVIIPAGVPRKPG---MTR---DDLFNINAGI----VRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPK  182 (354)
Q Consensus       113 vVIi~ag~~~~~g---~~r---~d~~~~n~~~----~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~~~~~~~~~~p~~  182 (354)
                      ++|+.||......   .+.   ...+..|+..    .+.+.+.+++. ..+.||++|......            +.+..
T Consensus        88 ~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~-~~g~iv~isS~~~~~------------~~~~~  154 (267)
T 3t4x_A           88 ILINNLGIFEPVEYFDIPDEDWFKLFEVNIMSGVRLTRSYLKKMIER-KEGRVIFIASEAAIM------------PSQEM  154 (267)
T ss_dssp             EEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-TEEEEEEECCGGGTS------------CCTTC
T ss_pred             EEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC-CCCEEEEEcchhhcc------------CCCcc
Confidence            9999998754221   222   2335667665    55555555543 356666665422111            22222


Q ss_pred             CEEEeccchHHHHHHHHHHHhCCCCCCCcceEEe
Q 018512          183 KLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVVG  216 (354)
Q Consensus       183 kviG~t~ld~~r~~~~la~~l~v~~~~v~~~v~G  216 (354)
                      -.++.+......+.+.+|..++  +..|++..+.
T Consensus       155 ~~Y~asKaa~~~l~~~la~e~~--~~gi~vn~v~  186 (267)
T 3t4x_A          155 AHYSATKTMQLSLSRSLAELTT--GTNVTVNTIM  186 (267)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTT--TSEEEEEEEE
T ss_pred             hHHHHHHHHHHHHHHHHHHHhC--CCCeEEEEEe
Confidence            2333333334456677777764  4445444443

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}

Probab=97.53  E-value=0.00028  Score=62.82  Aligned_cols=115  Identities=19%  Similarity=0.223  Sum_probs=67.4

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEE-ecCCc--hhHHHHHhcCCCCCeEEEEeCCCc---HHhh-------hC
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLY-DVVNT--PGVTADISHMDTGAVVRGFLGQPQ---LENA-------LT  109 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~-D~~~~--~g~~~dl~~~~~~~~v~~~~~~~d---~~~a-------l~  109 (354)
                      ++|.|+||+|.+|..++..|+..|.  +|+++ +++..  .....++.........-...+-+|   .+++       +.
T Consensus         2 k~vlITGasggiG~~~a~~l~~~G~--~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   79 (245)
T 2ph3_A            2 RKALITGASRGIGRAIALRLAEDGF--ALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANLLEAEAATALVHQAAEVLG   79 (245)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHTTTC--EEEEEESSCHHHHHHHHHHHHHTTCSCEEEEECCTTSHHHHHHHHHHHHHHHT
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCC--EEEEEcCCCHHHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHHHhcC
Confidence            4799999999999999999999887  88887 66542  222233332221111101111122   2222       34


Q ss_pred             CCcEEEEcCCCCCCC---CCC---HHHHHHHHHHH----HHHHHHHHhhhCCCeEEEEecC
Q 018512          110 GMDLVIIPAGVPRKP---GMT---RDDLFNINAGI----VRTLCEGIAKCCPNATVNLISN  160 (354)
Q Consensus       110 ~aDvVIi~ag~~~~~---g~~---r~d~~~~n~~~----~~~i~~~i~~~~p~a~viv~tN  160 (354)
                      +.|+||+.||.....   ..+   ....+..|+..    .+.+.+.+++.. .+.|+++|.
T Consensus        80 ~~d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~-~~~iv~~sS  139 (245)
T 2ph3_A           80 GLDTLVNNAGITRDTLLVRMKDEDWEAVLEANLSAVFRTTREAVKLMMKAR-FGRIVNITS  139 (245)
T ss_dssp             CCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECC
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcC-CCEEEEEeC
Confidence            899999999875321   112   23345667666    666666666553 456666653

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*

Probab=97.52  E-value=0.00056  Score=62.82  Aligned_cols=116  Identities=16%  Similarity=0.186  Sum_probs=69.3

Q ss_pred             CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC------------------chhHHHHHhcCCCCCeEEEEe-CC
Q 018512           41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN------------------TPGVTADISHMDTGAVVRGFL-GQ  101 (354)
Q Consensus        41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~------------------~~g~~~dl~~~~~~~~v~~~~-~~  101 (354)
                      +.+++.|+||+|.+|..++..|+..|.  .|+++|++.                  .......+....  ..+..+. +-
T Consensus        10 ~~k~~lVTGas~gIG~aia~~la~~G~--~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dv   85 (286)
T 3uve_A           10 EGKVAFVTGAARGQGRSHAVRLAQEGA--DIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHN--RRIVTAEVDV   85 (286)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC--EEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTT--CCEEEEECCT
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC--eEEEEeccccccccccccccccCCHHHHHHHHHHHhhcC--CceEEEEcCC
Confidence            345899999999999999999999998  899999862                  111122232221  2233221 11


Q ss_pred             Cc---HHhhh-------CCCcEEEEcCCCCCCCC----CCH---HHHHHHHHHH----HHHHHHHHhhhCCCeEEEEecC
Q 018512          102 PQ---LENAL-------TGMDLVIIPAGVPRKPG----MTR---DDLFNINAGI----VRTLCEGIAKCCPNATVNLISN  160 (354)
Q Consensus       102 ~d---~~~al-------~~aDvVIi~ag~~~~~g----~~r---~d~~~~n~~~----~~~i~~~i~~~~p~a~viv~tN  160 (354)
                      +|   .++++       ...|++|+.||......    .+.   ...+.-|+..    .+.+.+.+.+....+.||++|.
T Consensus        86 ~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS  165 (286)
T 3uve_A           86 RDYDALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSEEDWTEMIDINLAGVWKTVKAGVPHMIAGGRGGSIILTSS  165 (286)
T ss_dssp             TCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECC
T ss_pred             CCHHHHHHHHHHHHHHhCCCCEEEECCcccCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCcEEEEECc
Confidence            22   22222       37899999999754322    122   2344556544    4445555555555677777764

>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6

Probab=97.52  E-value=0.00038  Score=63.73  Aligned_cols=91  Identities=14%  Similarity=0.150  Sum_probs=59.9

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcCCCCC
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVPR  122 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~ag~~~  122 (354)
                      |||+|||+ |.+|..++..|...++  +|+++|+++...  ..+.......  ..   +.++.++ +++|+||++...  
T Consensus         1 m~i~iiG~-G~~G~~~a~~l~~~g~--~V~~~~~~~~~~--~~~~~~g~~~--~~---~~~~~~~-~~~D~vi~av~~--   67 (279)
T 2f1k_A            1 MKIGVVGL-GLIGASLAGDLRRRGH--YLIGVSRQQSTC--EKAVERQLVD--EA---GQDLSLL-QTAKIIFLCTPI--   67 (279)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTC--EEEEECSCHHHH--HHHHHTTSCS--EE---ESCGGGG-TTCSEEEECSCH--
T ss_pred             CEEEEEcC-cHHHHHHHHHHHHCCC--EEEEEECCHHHH--HHHHhCCCCc--cc---cCCHHHh-CCCCEEEEECCH--
Confidence            69999998 9999999999998887  899999875211  1122221111  12   1355676 999999998421  


Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecC
Q 018512          123 KPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISN  160 (354)
Q Consensus       123 ~~g~~r~d~~~~n~~~~~~i~~~i~~~~-p~a~viv~tN  160 (354)
                                    ..+.++++.+..+. |+.+|+.+++
T Consensus        68 --------------~~~~~~~~~l~~~~~~~~~vv~~~~   92 (279)
T 2f1k_A           68 --------------QLILPTLEKLIPHLSPTAIVTDVAS   92 (279)
T ss_dssp             --------------HHHHHHHHHHGGGSCTTCEEEECCS
T ss_pred             --------------HHHHHHHHHHHhhCCCCCEEEECCC
Confidence                          13445556666554 5776665544

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*

Probab=97.52  E-value=0.00071  Score=61.00  Aligned_cols=113  Identities=16%  Similarity=0.125  Sum_probs=68.4

Q ss_pred             CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc--hhHHHHHhcCCCCCeEEEEe-CCC---cHHhhhC-----
Q 018512           41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFL-GQP---QLENALT-----  109 (354)
Q Consensus        41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~--~g~~~dl~~~~~~~~v~~~~-~~~---d~~~al~-----  109 (354)
                      +.++|.|+||+|.+|..++..|+..|.  +|+++|++..  .....++.     ..+..+. +-+   +++++++     
T Consensus        11 ~~k~vlVTGasggiG~~~a~~l~~~G~--~V~~~~r~~~~~~~~~~~~~-----~~~~~~~~D~~~~~~v~~~~~~~~~~   83 (265)
T 2o23_A           11 KGLVAVITGGASGLGLATAERLVGQGA--SAVLLDLPNSGGEAQAKKLG-----NNCVFAPADVTSEKDVQTALALAKGK   83 (265)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEECTTSSHHHHHHHHC-----TTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC--EEEEEeCCcHhHHHHHHHhC-----CceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            345899999999999999999999987  8999999762  22223331     1122211 112   2333444     


Q ss_pred             --CCcEEEEcCCCCCCCC---------CC---HHHHHHHHHHHHHHHHHHHhhh----C-----CCeEEEEecC
Q 018512          110 --GMDLVIIPAGVPRKPG---------MT---RDDLFNINAGIVRTLCEGIAKC----C-----PNATVNLISN  160 (354)
Q Consensus       110 --~aDvVIi~ag~~~~~g---------~~---r~d~~~~n~~~~~~i~~~i~~~----~-----p~a~viv~tN  160 (354)
                        ..|+||+.||......         .+   ....+..|+.....+.+.+.++    .     ..+.||++|.
T Consensus        84 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~isS  157 (265)
T 2o23_A           84 FGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTAS  157 (265)
T ss_dssp             HSCCCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECC
T ss_pred             CCCCCEEEECCccCCCCccccccccCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccccCCCCcEEEEeCC
Confidence              8999999998653211         12   2334556766555555554443    1     3456666653

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}

Probab=97.52  E-value=0.00039  Score=65.30  Aligned_cols=117  Identities=18%  Similarity=0.155  Sum_probs=68.0

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc--hhHHHHHhcCCCCCeEEEEe-CCCc---HHhhh-------
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFL-GQPQ---LENAL-------  108 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~--~g~~~dl~~~~~~~~v~~~~-~~~d---~~~al-------  108 (354)
                      .++|.|+||+|.+|.+++..|+..|.  .|++.|++..  .....++........+..+. +-++   +.+++       
T Consensus         8 ~k~vlVTGas~gIG~~la~~l~~~G~--~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   85 (319)
T 3ioy_A            8 GRTAFVTGGANGVGIGLVRQLLNQGC--KVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVEARF   85 (319)
T ss_dssp             TCEEEEETTTSTHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             CCEEEEcCCchHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHHHhC
Confidence            35899999999999999999999998  8999999762  22223333221111233221 1122   22333       


Q ss_pred             CCCcEEEEcCCCCCCCC---CC---HHHHHHHHHHHHH----HHHHHHhhh-----CCCeEEEEecC
Q 018512          109 TGMDLVIIPAGVPRKPG---MT---RDDLFNINAGIVR----TLCEGIAKC-----CPNATVNLISN  160 (354)
Q Consensus       109 ~~aDvVIi~ag~~~~~g---~~---r~d~~~~n~~~~~----~i~~~i~~~-----~p~a~viv~tN  160 (354)
                      ...|+||++||......   .+   ..+.+.-|+....    .+.+.+.+.     ...+.|+++|.
T Consensus        86 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iV~isS  152 (319)
T 3ioy_A           86 GPVSILCNNAGVNLFQPIEESSYDDWDWLLGVNLHGVVNGVTTFVPRMVERVKAGEQKGGHVVNTAS  152 (319)
T ss_dssp             CCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTSCCCCEEEEECC
T ss_pred             CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhhccCCCCcEEEEecc
Confidence            36699999999653211   12   2234555654444    444444443     13566776654

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}

Probab=97.52  E-value=0.00015  Score=65.62  Aligned_cols=144  Identities=13%  Similarity=0.014  Sum_probs=78.6

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc--hhHHHHHhcCCCCCeEEEEe-CCCc---HHhhh-------
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFL-GQPQ---LENAL-------  108 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~--~g~~~dl~~~~~~~~v~~~~-~~~d---~~~al-------  108 (354)
                      .+++.|+||+|.+|.+++..|+..|.  +|++.|++..  .....++.     ..+..+. +-+|   .++++       
T Consensus         7 ~k~~lVTGas~gIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~-----~~~~~~~~Dv~~~~~v~~~~~~~~~~~   79 (257)
T 3tpc_A            7 SRVFIVTGASSGLGAAVTRMLAQEGA--TVLGLDLKPPAGEEPAAELG-----AAVRFRNADVTNEADATAALAFAKQEF   79 (257)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHHTTC--EEEEEESSCC-----------------CEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCC--EEEEEeCChHHHHHHHHHhC-----CceEEEEccCCCHHHHHHHHHHHHHHc
Confidence            35799999999999999999999998  8999999862  21222221     1111111 1122   22333       


Q ss_pred             CCCcEEEEcCCCCCCCC-------CC---HHHHHHHHHHHHHHHHHHHhhh---------CCCeEEEEecCCCCCchHHH
Q 018512          109 TGMDLVIIPAGVPRKPG-------MT---RDDLFNINAGIVRTLCEGIAKC---------CPNATVNLISNPVNSTVPIA  169 (354)
Q Consensus       109 ~~aDvVIi~ag~~~~~g-------~~---r~d~~~~n~~~~~~i~~~i~~~---------~p~a~viv~tNPv~~~~~~~  169 (354)
                      ...|++|+.||......       .+   ....+.-|+.....+.+.+.++         ...+.||++|....      
T Consensus        80 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~~~g~iv~isS~~~------  153 (257)
T 3tpc_A           80 GHVHGLVNCAGTAPGEKILGRSGPHALDSFARTVAVNLIGTFNMIRLAAEVMSQGEPDADGERGVIVNTASIAA------  153 (257)
T ss_dssp             SCCCEEEECCCCCCCCCSEETTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHH------
T ss_pred             CCCCEEEECCCCCCCCccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccccCCCCCeEEEEEechhh------
Confidence            38999999998653211       12   2334556665554444444433         23566777664211      


Q ss_pred             HHHHHHhCCCCCCCEEEeccchHHHHHHHHHHHhC
Q 018512          170 AEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEVLG  204 (354)
Q Consensus       170 ~~~~~~~~~~p~~kviG~t~ld~~r~~~~la~~l~  204 (354)
                          ..  +.|..-.++.+......+.+.+|..++
T Consensus       154 ----~~--~~~~~~~Y~asKaa~~~~~~~la~e~~  182 (257)
T 3tpc_A          154 ----FD--GQIGQAAYAASKGGVAALTLPAARELA  182 (257)
T ss_dssp             ----HH--CCTTCHHHHHHHHHHHHHHHHHHHHHG
T ss_pred             ----cc--CCCCCcchHHHHHHHHHHHHHHHHHHH
Confidence                01  233333344443334456667777753

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0

Probab=97.52  E-value=0.00082  Score=61.59  Aligned_cols=149  Identities=15%  Similarity=0.163  Sum_probs=83.4

Q ss_pred             CCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecC-------------C--chhHHHHHhcCCCCCeEEEEe-CCCc
Q 018512           40 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVV-------------N--TPGVTADISHMDTGAVVRGFL-GQPQ  103 (354)
Q Consensus        40 ~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~-------------~--~~g~~~dl~~~~~~~~v~~~~-~~~d  103 (354)
                      -+.+++.|+||+|.+|.+++..|+..|.  +|++.|++             .  ......++....  ..+..+. +-+|
T Consensus        13 l~gk~~lVTGas~gIG~a~a~~la~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~   88 (280)
T 3pgx_A           13 LQGRVAFITGAARGQGRSHAVRLAAEGA--DIIACDICAPVSASVTYAPASPEDLDETARLVEDQG--RKALTRVLDVRD   88 (280)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTC--EEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTT--CCEEEEECCTTC
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHCCC--EEEEEeccccccccccccccCHHHHHHHHHHHHhcC--CeEEEEEcCCCC
Confidence            3445899999999999999999999998  89999983             1  112223333322  2222221 1122


Q ss_pred             ---HHhh-------hCCCcEEEEcCCCCCCCC---CCH---HHHHHHHHH----HHHHHHHHHhhhCCCeEEEEecCCCC
Q 018512          104 ---LENA-------LTGMDLVIIPAGVPRKPG---MTR---DDLFNINAG----IVRTLCEGIAKCCPNATVNLISNPVN  163 (354)
Q Consensus       104 ---~~~a-------l~~aDvVIi~ag~~~~~g---~~r---~d~~~~n~~----~~~~i~~~i~~~~p~a~viv~tNPv~  163 (354)
                         .++.       +...|++|+.||......   .+.   ...+.-|+.    ..+...+.+.+....+.||++|....
T Consensus        89 ~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~  168 (280)
T 3pgx_A           89 DAALRELVADGMEQFGRLDVVVANAGVLSWGRVWELTDEQWDTVIGVNLTGTWRTLRATVPAMIEAGNGGSIVVVSSSAG  168 (280)
T ss_dssp             HHHHHHHHHHHHHHHCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGG
T ss_pred             HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEEcchhh
Confidence               2222       237899999998753221   122   233445654    44555555666555677777764221


Q ss_pred             CchHHHHHHHHHhCCCCCCCEEEeccchHHHHHHHHHHHhC
Q 018512          164 STVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEVLG  204 (354)
Q Consensus       164 ~~~~~~~~~~~~~~~~p~~kviG~t~ld~~r~~~~la~~l~  204 (354)
                      ..            +.|..-.++.+......+.+.+|..++
T Consensus       169 ~~------------~~~~~~~Y~asKaa~~~~~~~la~e~~  197 (280)
T 3pgx_A          169 LK------------ATPGNGHYSASKHGLTALTNTLAIELG  197 (280)
T ss_dssp             TS------------CCTTBHHHHHHHHHHHHHHHHHHHHHG
T ss_pred             cc------------CCCCchhHHHHHHHHHHHHHHHHHHhh
Confidence            11            223222333333334456677777653

>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}

Probab=97.51  E-value=0.00025  Score=65.46  Aligned_cols=65  Identities=15%  Similarity=0.272  Sum_probs=46.5

Q ss_pred             CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcC
Q 018512           41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA  118 (354)
Q Consensus        41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~a  118 (354)
                      .+|||+|||+ |.+|+.++..|...++  +|+++| ++....  .+....    +.   ...+++++++++|+||++.
T Consensus         2 ~~m~i~iiG~-G~~G~~~a~~l~~~g~--~V~~~~-~~~~~~--~~~~~g----~~---~~~~~~~~~~~~D~vi~~v   66 (295)
T 1yb4_A            2 NAMKLGFIGL-GIMGSPMAINLARAGH--QLHVTT-IGPVAD--ELLSLG----AV---NVETARQVTEFADIIFIMV   66 (295)
T ss_dssp             --CEEEECCC-STTHHHHHHHHHHTTC--EEEECC-SSCCCH--HHHTTT----CB---CCSSHHHHHHTCSEEEECC
T ss_pred             CCCEEEEEcc-CHHHHHHHHHHHhCCC--EEEEEc-CHHHHH--HHHHcC----Cc---ccCCHHHHHhcCCEEEEEC
Confidence            4579999998 9999999999998887  899999 762211  122211    11   1346678889999999985

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=97.51  E-value=0.0004  Score=62.58  Aligned_cols=149  Identities=13%  Similarity=0.087  Sum_probs=82.2

Q ss_pred             CCCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEec-CC--chhHHHHHhcCCCCCeEEEEe-CCCc---HHhhh---
Q 018512           39 GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDV-VN--TPGVTADISHMDTGAVVRGFL-GQPQ---LENAL---  108 (354)
Q Consensus        39 ~~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~-~~--~~g~~~dl~~~~~~~~v~~~~-~~~d---~~~al---  108 (354)
                      ..+.++|.|+||+|.+|..++..|+..|.  .|++.|. +.  ......++.....  .+..+. +-+|   .++++   
T Consensus        10 ~~~~k~vlITGas~giG~~ia~~l~~~G~--~v~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~Dv~~~~~v~~~~~~~   85 (256)
T 3ezl_A           10 VMSQRIAYVTGGMGGIGTSICQRLHKDGF--RVVAGCGPNSPRRVKWLEDQKALGF--DFYASEGNVGDWDSTKQAFDKV   85 (256)
T ss_dssp             ---CEEEEETTTTSHHHHHHHHHHHHTTE--EEEEEECTTCSSHHHHHHHHHHTTC--CCEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCC--EEEEEeCCCHHHHHHHHHHHHhcCC--eeEEEecCCCCHHHHHHHHHHH
Confidence            34456899999999999999999999987  8888884 33  2223333433221  122111 1122   22333   


Q ss_pred             ----CCCcEEEEcCCCCCCC---CCCH---HHHHHHHHHH----HHHHHHHHhhhCCCeEEEEecCCCCCchHHHHHHHH
Q 018512          109 ----TGMDLVIIPAGVPRKP---GMTR---DDLFNINAGI----VRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFK  174 (354)
Q Consensus       109 ----~~aDvVIi~ag~~~~~---g~~r---~d~~~~n~~~----~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~~~~~  174 (354)
                          ...|++|+.||.....   ..+.   ...+.-|+..    .+.+.+.+++.. .+.|+++|......         
T Consensus        86 ~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~---------  155 (256)
T 3ezl_A           86 KAEVGEIDVLVNNAGITRDVVFRKMTREDWQAVIDTNLTSLFNVTKQVIDGMVERG-WGRIINISSVNGQK---------  155 (256)
T ss_dssp             HHHTCCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCCCGGG---------
T ss_pred             HHhcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEEcchhhcc---------
Confidence                3789999999875422   1222   3345566655    455555555543 46667766533221         


Q ss_pred             HhCCCCCCCEEEeccchHHHHHHHHHHHhC
Q 018512          175 KAGTYDPKKLLGVTMLDVVRANTFVAEVLG  204 (354)
Q Consensus       175 ~~~~~p~~kviG~t~ld~~r~~~~la~~l~  204 (354)
                         +.+..-.++.+......+.+.++..+.
T Consensus       156 ---~~~~~~~Y~asK~a~~~~~~~la~e~~  182 (256)
T 3ezl_A          156 ---GQFGQTNYSTAKAGIHGFTMSLAQEVA  182 (256)
T ss_dssp             ---SCSCCHHHHHHHHHHHHHHHHHHHHHG
T ss_pred             ---CCCCCcccHHHHHHHHHHHHHHHHHHH
Confidence               233333344443334456667777663

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*

Probab=97.51  E-value=0.00017  Score=64.38  Aligned_cols=114  Identities=18%  Similarity=0.262  Sum_probs=67.3

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc--hhHHHHHhcCCCCCeEEEEe-CCC---cHHhhhC------
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFL-GQP---QLENALT------  109 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~--~g~~~dl~~~~~~~~v~~~~-~~~---d~~~al~------  109 (354)
                      .++|.|+||+|.+|..++..|+..|.  +|+++|++..  .....++.... ...+..+. +-.   +++++++      
T Consensus         7 ~~~vlVtGasggiG~~la~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~   83 (248)
T 2pnf_A            7 GKVSLVTGSTRGIGRAIAEKLASAGS--TVIITGTSGERAKAVAEEIANKY-GVKAHGVEMNLLSEESINKAFEEIYNLV   83 (248)
T ss_dssp             TCEEEETTCSSHHHHHHHHHHHHTTC--EEEEEESSHHHHHHHHHHHHHHH-CCCEEEEECCTTCHHHHHHHHHHHHHHS
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCC--EEEEEeCChHHHHHHHHHHHhhc-CCceEEEEccCCCHHHHHHHHHHHHHhc
Confidence            45899999999999999999999987  8999998752  22222232100 11222211 112   2333343      


Q ss_pred             -CCcEEEEcCCCCCCC---CCC---HHHHHHHHHHHHHH----HHHHHhhhCCCeEEEEec
Q 018512          110 -GMDLVIIPAGVPRKP---GMT---RDDLFNINAGIVRT----LCEGIAKCCPNATVNLIS  159 (354)
Q Consensus       110 -~aDvVIi~ag~~~~~---g~~---r~d~~~~n~~~~~~----i~~~i~~~~p~a~viv~t  159 (354)
                       +.|+||++||.....   ..+   ..+.+..|+.....    +.+.+++.. .+.||++|
T Consensus        84 ~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~~~iv~~s  143 (248)
T 2pnf_A           84 DGIDILVNNAGITRDKLFLRMSLLDWEEVLKVNLTGTFLVTQNSLRKMIKQR-WGRIVNIS  143 (248)
T ss_dssp             SCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHCHHHHHHT-CEEEEEEC
T ss_pred             CCCCEEEECCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-CcEEEEEc
Confidence             899999999865421   112   23455667766644    444444433 45666665

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2

Probab=97.51  E-value=0.00056  Score=63.20  Aligned_cols=122  Identities=11%  Similarity=0.092  Sum_probs=73.1

Q ss_pred             CCCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCC---CCCeEEEEeC-CCc---HHhhhC
Q 018512           39 GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMD---TGAVVRGFLG-QPQ---LENALT  109 (354)
Q Consensus        39 ~~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~---~~~~v~~~~~-~~d---~~~al~  109 (354)
                      ..+.++|.|+||+|.+|++++..|+..|.  +|+++|++.  ......++....   ....+..+.. -+|   +.++++
T Consensus        15 ~l~~k~vlVTGasggIG~~la~~l~~~G~--~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~   92 (303)
T 1yxm_A           15 LLQGQVAIVTGGATGIGKAIVKELLELGS--NVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVK   92 (303)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHH
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCHHHHHHHHH
Confidence            34456899999999999999999999997  899999875  222233343210   1122333211 122   223333


Q ss_pred             -------CCcEEEEcCCCCCCC---CCCH---HHHHHHHHHHHHHHHHHHhhhC---CCeEEEEecCCC
Q 018512          110 -------GMDLVIIPAGVPRKP---GMTR---DDLFNINAGIVRTLCEGIAKCC---PNATVNLISNPV  162 (354)
Q Consensus       110 -------~aDvVIi~ag~~~~~---g~~r---~d~~~~n~~~~~~i~~~i~~~~---p~a~viv~tNPv  162 (354)
                             ..|+||++||.....   ..+.   ...+..|+.....+++.+.+..   ..+.|+++|...
T Consensus        93 ~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~  161 (303)
T 1yxm_A           93 STLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPT  161 (303)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCCC
T ss_pred             HHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCeEEEEEeec
Confidence                   589999999854321   1222   3346678777777766654421   246667666443

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}

Probab=97.51  E-value=0.00046  Score=61.69  Aligned_cols=114  Identities=14%  Similarity=0.145  Sum_probs=66.8

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc--hhHHHHHhcCCCCCeEEEEe-CCCc---HHhhhC-------
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFL-GQPQ---LENALT-------  109 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~--~g~~~dl~~~~~~~~v~~~~-~~~d---~~~al~-------  109 (354)
                      ++|.|+||+|.+|..++..|+..|.  +|+++|++..  .....++.... ...+..+. +-+|   ++++++       
T Consensus         3 k~vlItGasggiG~~~a~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   79 (250)
T 2cfc_A            3 RVAIVTGASSGNGLAIATRFLARGD--RVAALDLSAETLEETARTHWHAY-ADKVLRVRADVADEGDVNAAIAATMEQFG   79 (250)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHSTTT-GGGEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHHhc-CCcEEEEEecCCCHHHHHHHHHHHHHHhC
Confidence            4799999999999999999999997  8999998752  22223331111 12233221 1122   233333       


Q ss_pred             CCcEEEEcCCCCCCCC------CC---HHHHHHHHHHHH----HHHHHHHhhhCCCeEEEEecC
Q 018512          110 GMDLVIIPAGVPRKPG------MT---RDDLFNINAGIV----RTLCEGIAKCCPNATVNLISN  160 (354)
Q Consensus       110 ~aDvVIi~ag~~~~~g------~~---r~d~~~~n~~~~----~~i~~~i~~~~p~a~viv~tN  160 (354)
                      +.|+||+.||......      .+   ....+..|+...    +.+.+.+++.. .+.|+++|.
T Consensus        80 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~isS  142 (250)
T 2cfc_A           80 AIDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLGCRAVLPHMLLQG-AGVIVNIAS  142 (250)
T ss_dssp             CCCEEEECCCCCCCTTCCSGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECC
T ss_pred             CCCEEEECCCCCCCCCcchhhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC-CCEEEEECC
Confidence            8999999998653211      12   223445565444    45555555443 456666653

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}

Probab=97.51  E-value=0.00042  Score=62.82  Aligned_cols=112  Identities=21%  Similarity=0.279  Sum_probs=65.6

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCch--hHHHHHhcCCCCCeEEEE-eCCC---cHHhhhC------
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP--GVTADISHMDTGAVVRGF-LGQP---QLENALT------  109 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~--g~~~dl~~~~~~~~v~~~-~~~~---d~~~al~------  109 (354)
                      .++|.|+||+|.+|.+++..|+..|.  +|++.|++...  ....++..     .+..+ .+-+   +++++++      
T Consensus        12 ~k~vlVTGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~-----~~~~~~~D~~d~~~v~~~~~~~~~~~   84 (263)
T 3ak4_A           12 GRKAIVTGGSKGIGAAIARALDKAGA--TVAIADLDVMAAQAVVAGLEN-----GGFAVEVDVTKRASVDAAMQKAIDAL   84 (263)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHTCTT-----CCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHhc-----CCeEEEEeCCCHHHHHHHHHHHHHHc
Confidence            45899999999999999999999998  89999987521  11122211     11111 1112   2333343      


Q ss_pred             -CCcEEEEcCCCCCCC---CCC---HHHHHHHHHHHHHHH----HHHHhhhCCCeEEEEecC
Q 018512          110 -GMDLVIIPAGVPRKP---GMT---RDDLFNINAGIVRTL----CEGIAKCCPNATVNLISN  160 (354)
Q Consensus       110 -~aDvVIi~ag~~~~~---g~~---r~d~~~~n~~~~~~i----~~~i~~~~p~a~viv~tN  160 (354)
                       +.|+||+.||.....   ..+   ....+..|+.....+    .+.+.+....+.|+++|.
T Consensus        85 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS  146 (263)
T 3ak4_A           85 GGFDLLCANAGVSTMRPAVDITDEEWDFNFDVNARGVFLANQIACRHFLASNTKGVIVNTAS  146 (263)
T ss_dssp             TCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECC
T ss_pred             CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEecc
Confidence             899999999865321   122   223455565444444    444444332466666653

>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}

Probab=97.50  E-value=0.00047  Score=63.55  Aligned_cols=92  Identities=18%  Similarity=0.267  Sum_probs=61.7

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcCCCC
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVP  121 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~ag~~  121 (354)
                      +|||+|||++|.+|+.++..|...|+  +|+++|+++..  ...+....    +..   + +..+++++||+||++... 
T Consensus        11 mm~I~iIG~tG~mG~~la~~l~~~g~--~V~~~~r~~~~--~~~~~~~g----~~~---~-~~~~~~~~aDvVi~av~~-   77 (286)
T 3c24_A           11 PKTVAILGAGGKMGARITRKIHDSAH--HLAAIEIAPEG--RDRLQGMG----IPL---T-DGDGWIDEADVVVLALPD-   77 (286)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHSSS--EEEEECCSHHH--HHHHHHTT----CCC---C-CSSGGGGTCSEEEECSCH-
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCC--EEEEEECCHHH--HHHHHhcC----CCc---C-CHHHHhcCCCEEEEcCCc-
Confidence            36999999879999999999999887  89999987521  11222211    111   1 345778999999998421 


Q ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecCC
Q 018512          122 RKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNP  161 (354)
Q Consensus       122 ~~~g~~r~d~~~~n~~~~~~i~~~i~~~~-p~a~viv~tNP  161 (354)
                                     ..+.++++.+..+. |+.+|+..|+.
T Consensus        78 ---------------~~~~~v~~~l~~~l~~~~ivv~~s~~  103 (286)
T 3c24_A           78 ---------------NIIEKVAEDIVPRVRPGTIVLILDAA  103 (286)
T ss_dssp             ---------------HHHHHHHHHHGGGSCTTCEEEESCSH
T ss_pred             ---------------hHHHHHHHHHHHhCCCCCEEEECCCC
Confidence                           11455666776654 57766665553

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}

Probab=97.50  E-value=0.00031  Score=63.15  Aligned_cols=114  Identities=17%  Similarity=0.228  Sum_probs=68.7

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEec-CC--chhHHHHHhcCCCCCeEEEEe-CCCc---HHhhh------
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDV-VN--TPGVTADISHMDTGAVVRGFL-GQPQ---LENAL------  108 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~-~~--~~g~~~dl~~~~~~~~v~~~~-~~~d---~~~al------  108 (354)
                      .+++.|+||+|.+|..++..|+..|.  +|++.|+ ++  ......++....  ..+..+. +-+|   .++++      
T Consensus         4 ~k~vlVTGas~giG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~   79 (246)
T 2uvd_A            4 GKVALVTGASRGIGRAIAIDLAKQGA--NVVVNYAGNEQKANEVVDEIKKLG--SDAIAVRADVANAEDVTNMVKQTVDV   79 (246)
T ss_dssp             TCEEEETTCSSHHHHHHHHHHHHTTC--EEEEEESSCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC--EEEEEeCCCHHHHHHHHHHHHhcC--CcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            45899999999999999999999997  8999998 43  222223333222  1222221 1122   22333      


Q ss_pred             -CCCcEEEEcCCCCCCC---CCC---HHHHHHHHHHH----HHHHHHHHhhhCCCeEEEEecC
Q 018512          109 -TGMDLVIIPAGVPRKP---GMT---RDDLFNINAGI----VRTLCEGIAKCCPNATVNLISN  160 (354)
Q Consensus       109 -~~aDvVIi~ag~~~~~---g~~---r~d~~~~n~~~----~~~i~~~i~~~~p~a~viv~tN  160 (354)
                       .+.|++|+.||.....   ..+   ....+.-|+..    .+.+.+.+++.. .+.||++|.
T Consensus        80 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS  141 (246)
T 2uvd_A           80 FGQVDILVNNAGVTKDNLLMRMKEEEWDTVINTNLKGVFLCTKAVSRFMMRQR-HGRIVNIAS  141 (246)
T ss_dssp             HSCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECC
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEECC
Confidence             3799999999875321   122   23345566655    555666665543 456666653

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2

Probab=97.50  E-value=7.6e-05  Score=68.92  Aligned_cols=96  Identities=18%  Similarity=0.148  Sum_probs=61.4

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc----hhHH---HHHhcCCCCCeEE-E-EeCCCcHHhhhCCCc
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT----PGVT---ADISHMDTGAVVR-G-FLGQPQLENALTGMD  112 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~----~g~~---~dl~~~~~~~~v~-~-~~~~~d~~~al~~aD  112 (354)
                      ++||+|+||+|++|++++..|+..|.  +|++++++..    ....   ..+....  ..+. . +....++.++++++|
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~--~V~~l~R~~~~~~~~~~~~~~~~l~~~~--v~~v~~D~~d~~~l~~~~~~~d   79 (308)
T 1qyc_A            4 RSRILLIGATGYIGRHVAKASLDLGH--PTFLLVRESTASSNSEKAQLLESFKASG--ANIVHGSIDDHASLVEAVKNVD   79 (308)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTC--CEEEECCCCCTTTTHHHHHHHHHHHTTT--CEEECCCTTCHHHHHHHHHTCS
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCC--CEEEEECCcccccCHHHHHHHHHHHhCC--CEEEEeccCCHHHHHHHHcCCC
Confidence            46899999999999999999999886  8888998742    1111   1222211  1111 1 111124567889999


Q ss_pred             EEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCeE
Q 018512          113 LVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNAT  154 (354)
Q Consensus       113 vVIi~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~-p~a~  154 (354)
                      +||++++...             +...+++++.+++.+ .+-+
T Consensus        80 ~vi~~a~~~~-------------~~~~~~l~~aa~~~g~v~~~  109 (308)
T 1qyc_A           80 VVISTVGSLQ-------------IESQVNIIKAIKEVGTVKRF  109 (308)
T ss_dssp             EEEECCCGGG-------------SGGGHHHHHHHHHHCCCSEE
T ss_pred             EEEECCcchh-------------hhhHHHHHHHHHhcCCCceE
Confidence            9999987532             223356677777766 4443

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}

Probab=97.50  E-value=0.0016  Score=59.65  Aligned_cols=150  Identities=17%  Similarity=0.123  Sum_probs=86.9

Q ss_pred             CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCC-CCeEEEEe-CCCc---HHhhh-----
Q 018512           41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDT-GAVVRGFL-GQPQ---LENAL-----  108 (354)
Q Consensus        41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~-~~~v~~~~-~~~d---~~~al-----  108 (354)
                      ..+++.|+||+|.+|.+++..|+..|.  +|++.|+++  ......++..... ...+..+. +-+|   .++++     
T Consensus        10 ~~k~vlVTGas~gIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   87 (281)
T 3svt_A           10 QDRTYLVTGGGSGIGKGVAAGLVAAGA--SVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDAVTA   87 (281)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHHHHH
Confidence            345899999999999999999999998  899999876  2333445544321 11333321 1122   22223     


Q ss_pred             --CCCcEEEEcCCCCCCCC----CC---HHHHHHHHHHHHHHHHHHHhhh---CCCeEEEEecCCCCCchHHHHHHHHHh
Q 018512          109 --TGMDLVIIPAGVPRKPG----MT---RDDLFNINAGIVRTLCEGIAKC---CPNATVNLISNPVNSTVPIAAEVFKKA  176 (354)
Q Consensus       109 --~~aDvVIi~ag~~~~~g----~~---r~d~~~~n~~~~~~i~~~i~~~---~p~a~viv~tNPv~~~~~~~~~~~~~~  176 (354)
                        ...|++|+.||.....+    .+   ....+.-|+.....+.+.+.++   ...+.||++|...            -.
T Consensus        88 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~------------~~  155 (281)
T 3svt_A           88 WHGRLHGVVHCAGGSENIGPITQVDSEAWRRTVDLNVNGTMYVLKHAAREMVRGGGGSFVGISSIA------------AS  155 (281)
T ss_dssp             HHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCHH------------HH
T ss_pred             HcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEeCHH------------Hc
Confidence              36799999998632221    22   2334566766555555544332   3456777765311            01


Q ss_pred             CCCCCCCEEEeccchHHHHHHHHHHHhC
Q 018512          177 GTYDPKKLLGVTMLDVVRANTFVAEVLG  204 (354)
Q Consensus       177 ~~~p~~kviG~t~ld~~r~~~~la~~l~  204 (354)
                      .+.+..-.++.+......+.+.+|..++
T Consensus       156 ~~~~~~~~Y~asK~a~~~l~~~la~e~~  183 (281)
T 3svt_A          156 NTHRWFGAYGVTKSAVDHLMQLAADELG  183 (281)
T ss_dssp             SCCTTCTHHHHHHHHHHHHHHHHHHHHG
T ss_pred             CCCCCChhHHHHHHHHHHHHHHHHHHhh
Confidence            1333333444444445567777787775

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*

Probab=97.50  E-value=0.00027  Score=64.14  Aligned_cols=115  Identities=15%  Similarity=0.155  Sum_probs=66.4

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc--hhHHHHHhcCCCCCeEEEEe-CCCc---HHhhh-------
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFL-GQPQ---LENAL-------  108 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~--~g~~~dl~~~~~~~~v~~~~-~~~d---~~~al-------  108 (354)
                      .+++.|+||+|.+|.+++..|+..|.  +|++.|++..  .....++.... ...+..+. +-+|   +++++       
T Consensus         7 ~k~vlVTGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~   83 (263)
T 3ai3_A            7 GKVAVITGSSSGIGLAIAEGFAKEGA--HIVLVARQVDRLHEAARSLKEKF-GVRVLEVAVDVATPEGVDAVVESVRSSF   83 (263)
T ss_dssp             TCEEEEESCSSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHHH-CCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCC--EEEEEcCCHHHHHHHHHHHHHhc-CCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            35899999999999999999999997  8999998752  22222332110 11122211 1122   22333       


Q ss_pred             CCCcEEEEcCCCCCCC---CCCH---HHHHHHHHHHH----HHHHHHHhhhCCCeEEEEecC
Q 018512          109 TGMDLVIIPAGVPRKP---GMTR---DDLFNINAGIV----RTLCEGIAKCCPNATVNLISN  160 (354)
Q Consensus       109 ~~aDvVIi~ag~~~~~---g~~r---~d~~~~n~~~~----~~i~~~i~~~~p~a~viv~tN  160 (354)
                      .+.|+||+.||.....   ..+.   ...+..|+...    +.+.+.+++.. .+.||++|.
T Consensus        84 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~isS  144 (263)
T 3ai3_A           84 GGADILVNNAGTGSNETIMEAADEKWQFYWELLVMAAVRLARGLVPGMRARG-GGAIIHNAS  144 (263)
T ss_dssp             SSCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECC
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEECc
Confidence            3899999999865321   1222   23445565444    44444454443 456666653

>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}

Probab=97.50  E-value=0.00031  Score=66.08  Aligned_cols=66  Identities=18%  Similarity=0.155  Sum_probs=48.4

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCC-CCcEEEEEecCCc-----hhHHHHHhcCCCCCeEEEEeCCC-cHHhhhCCCcEE
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINP-LVSVLHLYDVVNT-----PGVTADISHMDTGAVVRGFLGQP-QLENALTGMDLV  114 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~-~~~ei~L~D~~~~-----~g~~~dl~~~~~~~~v~~~~~~~-d~~~al~~aDvV  114 (354)
                      .|||+|||+ |.+|..++..|+..| +  +|+++|+++.     ......+.....      .   + +..+++++||+|
T Consensus        24 ~m~IgvIG~-G~mG~~lA~~L~~~G~~--~V~~~dr~~~~~~~~~~~~~~~~~~g~------~---~~s~~e~~~~aDvV   91 (317)
T 4ezb_A           24 MTTIAFIGF-GEAAQSIAGGLGGRNAA--RLAAYDLRFNDPAASGALRARAAELGV------E---PLDDVAGIACADVV   91 (317)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHTTTCS--EEEEECGGGGCTTTHHHHHHHHHHTTC------E---EESSGGGGGGCSEE
T ss_pred             CCeEEEECc-cHHHHHHHHHHHHcCCC--eEEEEeCCCccccchHHHHHHHHHCCC------C---CCCHHHHHhcCCEE
Confidence            369999999 999999999999988 7  9999999751     122233332221      1   2 346889999999


Q ss_pred             EEcCC
Q 018512          115 IIPAG  119 (354)
Q Consensus       115 Ii~ag  119 (354)
                      |++..
T Consensus        92 i~avp   96 (317)
T 4ezb_A           92 LSLVV   96 (317)
T ss_dssp             EECCC
T ss_pred             EEecC
Confidence            99853

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}

Probab=97.49  E-value=0.00058  Score=62.52  Aligned_cols=148  Identities=14%  Similarity=0.178  Sum_probs=82.4

Q ss_pred             CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCCCCeEEEEeCCCc---HHhhh-------
Q 018512           41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLGQPQ---LENAL-------  108 (354)
Q Consensus        41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~~~~v~~~~~~~d---~~~al-------  108 (354)
                      +.+++.|+||+|.+|..++..|+..|.  .|++.|++.  ......++............ +-+|   .++++       
T Consensus        27 ~~k~~lVTGas~GIG~aia~~la~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~-Dv~d~~~v~~~~~~~~~~~  103 (270)
T 3ftp_A           27 DKQVAIVTGASRGIGRAIALELARRGA--MVIGTATTEAGAEGIGAAFKQAGLEGRGAVL-NVNDATAVDALVESTLKEF  103 (270)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC--EEEEEESSHHHHHHHHHHHHHHTCCCEEEEC-CTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEE-eCCCHHHHHHHHHHHHHHc
Confidence            445799999999999999999999998  899999976  22223333322111111111 1122   22223       


Q ss_pred             CCCcEEEEcCCCCCCC---CCCH---HHHHHHHHHHHHHHHHH----HhhhCCCeEEEEecCCCCCchHHHHHHHHHhCC
Q 018512          109 TGMDLVIIPAGVPRKP---GMTR---DDLFNINAGIVRTLCEG----IAKCCPNATVNLISNPVNSTVPIAAEVFKKAGT  178 (354)
Q Consensus       109 ~~aDvVIi~ag~~~~~---g~~r---~d~~~~n~~~~~~i~~~----i~~~~p~a~viv~tNPv~~~~~~~~~~~~~~~~  178 (354)
                      ...|++|+.||.....   ..+.   ...+.-|+.....+.+.    +.+. ..+.||++|.-.         . ..  +
T Consensus       104 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-~~g~iv~isS~~---------~-~~--~  170 (270)
T 3ftp_A          104 GALNVLVNNAGITQDQLAMRMKDDEWDAVIDTNLKAVFRLSRAVLRPMMKA-RGGRIVNITSVV---------G-SA--G  170 (270)
T ss_dssp             SCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCHH---------H-HH--C
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCCEEEEECchh---------h-CC--C
Confidence            3789999999865322   1222   23455666555554444    4433 356677765311         0 11  3


Q ss_pred             CCCCCEEEeccchHHHHHHHHHHHhC
Q 018512          179 YDPKKLLGVTMLDVVRANTFVAEVLG  204 (354)
Q Consensus       179 ~p~~kviG~t~ld~~r~~~~la~~l~  204 (354)
                      .|..-.++.+......+.+.+|..++
T Consensus       171 ~~~~~~Y~asKaa~~~l~~~la~e~~  196 (270)
T 3ftp_A          171 NPGQVNYAAAKAGVAGMTRALAREIG  196 (270)
T ss_dssp             CTTBHHHHHHHHHHHHHHHHHHHHHG
T ss_pred             CCCchhHHHHHHHHHHHHHHHHHHHh
Confidence            33333344444334456677777763

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*

Probab=97.49  E-value=0.00047  Score=63.80  Aligned_cols=148  Identities=11%  Similarity=0.071  Sum_probs=87.6

Q ss_pred             CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc--hhHH-HHHhcCCCCCeEEEEe-CCCc---HHhhh-----
Q 018512           41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVT-ADISHMDTGAVVRGFL-GQPQ---LENAL-----  108 (354)
Q Consensus        41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~--~g~~-~dl~~~~~~~~v~~~~-~~~d---~~~al-----  108 (354)
                      +.+++.|+||+|.+|.+++..|+..|.  +|++.|++..  .... ..+....  ..+..+. +-+|   .++++     
T Consensus        46 ~gk~vlVTGas~GIG~aia~~la~~G~--~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~  121 (291)
T 3ijr_A           46 KGKNVLITGGDSGIGRAVSIAFAKEGA--NIAIAYLDEEGDANETKQYVEKEG--VKCVLLPGDLSDEQHCKDIVQETVR  121 (291)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESSCHHHHHHHHHHHHTTT--CCEEEEESCTTSHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEeCCchHHHHHHHHHHHhcC--CcEEEEECCCCCHHHHHHHHHHHHH
Confidence            456899999999999999999999998  8999999862  1112 2222222  2233221 1122   22222     


Q ss_pred             --CCCcEEEEcCCCCCCCC----CC---HHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecCCCCCchHHHHHHHHHhCC
Q 018512          109 --TGMDLVIIPAGVPRKPG----MT---RDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNSTVPIAAEVFKKAGT  178 (354)
Q Consensus       109 --~~aDvVIi~ag~~~~~g----~~---r~d~~~~n~~~~~~i~~~i~~~~-p~a~viv~tNPv~~~~~~~~~~~~~~~~  178 (354)
                        ...|++|+.||.....+    .+   ....+.-|+.....+.+.+..+- ..+.||++|.-.   .       ..  +
T Consensus       122 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~isS~~---~-------~~--~  189 (291)
T 3ijr_A          122 QLGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINTASIV---A-------YE--G  189 (291)
T ss_dssp             HHSSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEECCTH---H-------HH--C
T ss_pred             HcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEEechH---h-------cC--C
Confidence              37899999988653221    12   23456778888888888877654 345666665321   0       01  2


Q ss_pred             CCCCCEEEeccchHHHHHHHHHHHhC
Q 018512          179 YDPKKLLGVTMLDVVRANTFVAEVLG  204 (354)
Q Consensus       179 ~p~~kviG~t~ld~~r~~~~la~~l~  204 (354)
                      .+..-.++.+......+.+.+|..++
T Consensus       190 ~~~~~~Y~asKaa~~~l~~~la~e~~  215 (291)
T 3ijr_A          190 NETLIDYSATKGAIVAFTRSLSQSLV  215 (291)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHHG
T ss_pred             CCCChhHHHHHHHHHHHHHHHHHHHh
Confidence            33222334443334556677777763

>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}

Probab=97.48  E-value=0.00041  Score=66.53  Aligned_cols=92  Identities=13%  Similarity=0.222  Sum_probs=62.4

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCC---cEEEEcC
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGM---DLVIIPA  118 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~a---DvVIi~a  118 (354)
                      .|||+|||. |.+|..++..|+..|+  +|+++|+++.  ...++.....    .   ...+++++++++   |+||++.
T Consensus        22 ~mkIgiIGl-G~mG~~~A~~L~~~G~--~V~v~dr~~~--~~~~l~~~g~----~---~~~s~~e~~~~a~~~DvVi~~v   89 (358)
T 4e21_A           22 SMQIGMIGL-GRMGADMVRRLRKGGH--ECVVYDLNVN--AVQALEREGI----A---GARSIEEFCAKLVKPRVVWLMV   89 (358)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTC--EEEEECSCHH--HHHHHHTTTC----B---CCSSHHHHHHHSCSSCEEEECS
T ss_pred             CCEEEEECc-hHHHHHHHHHHHhCCC--EEEEEeCCHH--HHHHHHHCCC----E---EeCCHHHHHhcCCCCCEEEEeC
Confidence            479999998 9999999999999997  9999999752  2223333221    1   234677888888   9999984


Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecCC
Q 018512          119 GVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNP  161 (354)
Q Consensus       119 g~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~-p~a~viv~tNP  161 (354)
                      ..+                .+.++++.+.... ++.+||..||-
T Consensus        90 p~~----------------~v~~vl~~l~~~l~~g~iiId~st~  117 (358)
T 4e21_A           90 PAA----------------VVDSMLQRMTPLLAANDIVIDGGNS  117 (358)
T ss_dssp             CGG----------------GHHHHHHHHGGGCCTTCEEEECSSC
T ss_pred             CHH----------------HHHHHHHHHHhhCCCCCEEEeCCCC
Confidence            211                1233445555554 67777776653

>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}

Probab=97.47  E-value=0.00024  Score=65.20  Aligned_cols=156  Identities=8%  Similarity=0.112  Sum_probs=86.5

Q ss_pred             CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCCCCeEEEEe-CCCc---HHhhh------
Q 018512           41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQ---LENAL------  108 (354)
Q Consensus        41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~~~~v~~~~-~~~d---~~~al------  108 (354)
                      +.+++.|+||+|.+|..++..|+..|.  +|++.|++.  ......++....  ..+..+. +-+|   .++++      
T Consensus        25 ~gk~~lVTGas~gIG~aia~~la~~G~--~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~~  100 (271)
T 4ibo_A           25 GGRTALVTGSSRGLGRAMAEGLAVAGA--RILINGTDPSRVAQTVQEFRNVG--HDAEAVAFDVTSESEIIEAFARLDEQ  100 (271)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC--EEEECCSCHHHHHHHHHHHHHTT--CCEEECCCCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcC--CceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            345899999999999999999999998  899999876  233334444322  1222211 1112   22333      


Q ss_pred             -CCCcEEEEcCCCCCCCC---CCH---HHHHHHHHHHHHHH----HHHHhhhCCCeEEEEecCCCCCchHHHHHHHHHhC
Q 018512          109 -TGMDLVIIPAGVPRKPG---MTR---DDLFNINAGIVRTL----CEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAG  177 (354)
Q Consensus       109 -~~aDvVIi~ag~~~~~g---~~r---~d~~~~n~~~~~~i----~~~i~~~~p~a~viv~tNPv~~~~~~~~~~~~~~~  177 (354)
                       ...|++|+.||......   .+.   ...+..|+.....+    .+.+++.. .+.||++|......            
T Consensus       101 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iV~isS~~~~~------------  167 (271)
T 4ibo_A          101 GIDVDILVNNAGIQFRKPMIELETADWQRVIDTNLTSAFMIGREAAKRMIPRG-YGKIVNIGSLTSEL------------  167 (271)
T ss_dssp             TCCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTS------------
T ss_pred             CCCCCEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEEccHHhCC------------
Confidence             37899999998753221   222   23455565544444    55554443 46666665422111            


Q ss_pred             CCCCCCEEEeccchHHHHHHHHHHHhCCCCCCCcceEE
Q 018512          178 TYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVV  215 (354)
Q Consensus       178 ~~p~~kviG~t~ld~~r~~~~la~~l~v~~~~v~~~v~  215 (354)
                      +.+..-.++.+......+.+.+|..++  +..|++..+
T Consensus       168 ~~~~~~~Y~asKaa~~~l~~~la~e~~--~~gI~vn~v  203 (271)
T 4ibo_A          168 ARATVAPYTVAKGGIKMLTRAMAAEWA--QYGIQANAI  203 (271)
T ss_dssp             BCTTCHHHHHHHHHHHHHHHHHHHHHG--GGTEEEEEE
T ss_pred             CCCCchhHHHHHHHHHHHHHHHHHHHh--hhCeEEEEE
Confidence            222222333443334456677777764  334444333

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0

Probab=97.47  E-value=0.00089  Score=61.25  Aligned_cols=116  Identities=15%  Similarity=0.155  Sum_probs=74.4

Q ss_pred             CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--------------chhHHHHHhcCCCCCeEEEEe-CCCc--
Q 018512           41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--------------TPGVTADISHMDTGAVVRGFL-GQPQ--  103 (354)
Q Consensus        41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--------------~~g~~~dl~~~~~~~~v~~~~-~~~d--  103 (354)
                      +.+++.|+||+|.+|.+++..|+..|.  +|+++|++.              ......++....  ..+..+. +-+|  
T Consensus         9 ~gk~vlVTGas~gIG~~ia~~l~~~G~--~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~   84 (287)
T 3pxx_A            9 QDKVVLVTGGARGQGRSHAVKLAEEGA--DIILFDICHDIETNEYPLATSRDLEEAGLEVEKTG--RKAYTAEVDVRDRA   84 (287)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTT--SCEEEEECCTTCHH
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC--eEEEEcccccccccccchhhhHHHHHHHHHHHhcC--CceEEEEccCCCHH
Confidence            345899999999999999999999998  899999862              111122233221  2222221 1122  


Q ss_pred             -HHhhh-------CCCcEEEEcCCCCCCC-CCC---HHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecC
Q 018512          104 -LENAL-------TGMDLVIIPAGVPRKP-GMT---RDDLFNINAGIVRTLCEGIAKCC-PNATVNLISN  160 (354)
Q Consensus       104 -~~~al-------~~aDvVIi~ag~~~~~-g~~---r~d~~~~n~~~~~~i~~~i~~~~-p~a~viv~tN  160 (354)
                       .++++       ...|++|+.||..... ..+   ....+..|+.....+.+.+..+- ..+.||++|.
T Consensus        85 ~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS  154 (287)
T 3pxx_A           85 AVSRELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIITTGS  154 (287)
T ss_dssp             HHHHHHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECC
T ss_pred             HHHHHHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEEecc
Confidence             22223       3899999999875322 122   34567788888888888887764 4567777664

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2

Probab=97.47  E-value=0.00056  Score=61.71  Aligned_cols=110  Identities=12%  Similarity=0.132  Sum_probs=66.7

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc--hhHHHHHhcCCCCCeEEEEe-CCCc---HHhhh-------
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFL-GQPQ---LENAL-------  108 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~--~g~~~dl~~~~~~~~v~~~~-~~~d---~~~al-------  108 (354)
                      .+++.|+||+|.+|..++..|+..|.  +|++.|++..  .....++.     ..+..+. +-+|   +++++       
T Consensus         6 ~k~vlVTGas~giG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~-----~~~~~~~~D~~~~~~v~~~~~~~~~~~   78 (253)
T 1hxh_A            6 GKVALVTGGASGVGLEVVKLLLGEGA--KVAFSDINEAAGQQLAAELG-----ERSMFVRHDVSSEADWTLVMAAVQRRL   78 (253)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHHTTC--EEEEECSCHHHHHHHHHHHC-----TTEEEECCCTTCHHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHcC-----CceEEEEccCCCHHHHHHHHHHHHHHc
Confidence            45899999999999999999999987  8999998752  22222231     1122211 1112   22223       


Q ss_pred             CCCcEEEEcCCCCCCC---CCCH---HHHHHHHHH----HHHHHHHHHhhhCCCeEEEEecC
Q 018512          109 TGMDLVIIPAGVPRKP---GMTR---DDLFNINAG----IVRTLCEGIAKCCPNATVNLISN  160 (354)
Q Consensus       109 ~~aDvVIi~ag~~~~~---g~~r---~d~~~~n~~----~~~~i~~~i~~~~p~a~viv~tN  160 (354)
                      ...|+||+.||.....   ..+.   ...+..|+.    ..+.+.+.+++..  +.|+++|.
T Consensus        79 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~--g~iv~isS  138 (253)
T 1hxh_A           79 GTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETG--GSIINMAS  138 (253)
T ss_dssp             CSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTC--EEEEEECC
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhcHHHHHHHHHHHHHHHHcC--CEEEEEcc
Confidence            3569999999875321   1222   234555644    5556666666544  67777764

>4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus}

Probab=97.47  E-value=0.00013  Score=72.88  Aligned_cols=118  Identities=10%  Similarity=0.040  Sum_probs=71.2

Q ss_pred             CCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchh-----HHHHHhcC-------CCCCeEEEEeC----CCc
Q 018512           40 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPG-----VTADISHM-------DTGAVVRGFLG----QPQ  103 (354)
Q Consensus        40 ~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g-----~~~dl~~~-------~~~~~v~~~~~----~~d  103 (354)
                      .++++|.|+||+|++|++++..|...+.  +|+++++.....     ....+...       .....+..+.+    ...
T Consensus       148 ~~~~~VLVTGatG~iG~~l~~~L~~~g~--~V~~l~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~  225 (508)
T 4f6l_B          148 RPLGNTLLTGATGFLGAYLIEALQGYSH--RIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDD  225 (508)
T ss_dssp             CCCEEEEESCTTSHHHHHHHHHTBTTEE--EEEEEEESSSHHHHHHHHHHHHHHHSCHHHHHHHSTTEEEEEEBTTBCSS
T ss_pred             CCCCeEEEECCccchHHHHHHHHHhcCC--EEEEEECCCChHHHHHHHHHHHHHhcccccchhccCceEEEecCCccccc
Confidence            3457999999999999999999966665  899999876311     11111110       00122333211    012


Q ss_pred             HHhhhCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCC
Q 018512          104 LENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPV  162 (354)
Q Consensus       104 ~~~al~~aDvVIi~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv  162 (354)
                      +. ++.++|+||++|+.... .....++...|+...+++++.+.+ ....+|.+.|--+
T Consensus       226 l~-~~~~~D~Vih~Aa~~~~-~~~~~~~~~~Nv~gt~~ll~~a~~-~~~~~v~iSS~~v  281 (508)
T 4f6l_B          226 VV-LPENMDTIIHAGARTDH-FGDDDEFEKVNVQGTVDVIRLAQQ-HHARLIYVSTISV  281 (508)
T ss_dssp             CC-CSSCCSEEEECCCC---------CCHHHHHHHHHHHHHHHHT-TTCEEEEEEESCT
T ss_pred             CC-CccCCCEEEECCceecC-CCCHHHHhhhHHHHHHHHHHHHHh-CCCcEEEeCChhh
Confidence            22 56899999999986531 123344567799999999999988 4344444444333

>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}

Probab=97.47  E-value=0.00016  Score=65.28  Aligned_cols=95  Identities=13%  Similarity=0.209  Sum_probs=60.2

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCC--CcEEEEEecCCchhHHHHHhc-CCCCCeEEEEeCCCcHHhhhCCCcEEEEcCC
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPL--VSVLHLYDVVNTPGVTADISH-MDTGAVVRGFLGQPQLENALTGMDLVIIPAG  119 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~--~~ei~L~D~~~~~g~~~dl~~-~~~~~~v~~~~~~~d~~~al~~aDvVIi~ag  119 (354)
                      |||+|||+ |.+|..++..|...++  ..+|+++|+++..  ..++.. ..    +..   ..+..+++++||+||++. 
T Consensus         3 ~~i~iIG~-G~mG~~~a~~l~~~g~~~~~~V~~~~r~~~~--~~~~~~~~g----~~~---~~~~~e~~~~aDvVilav-   71 (247)
T 3gt0_A            3 KQIGFIGC-GNMGMAMIGGMINKNIVSSNQIICSDLNTAN--LKNASEKYG----LTT---TTDNNEVAKNADILILSI-   71 (247)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTSSCGGGEEEECSCHHH--HHHHHHHHC----CEE---CSCHHHHHHHCSEEEECS-
T ss_pred             CeEEEECc-cHHHHHHHHHHHhCCCCCCCeEEEEeCCHHH--HHHHHHHhC----CEE---eCChHHHHHhCCEEEEEe-
Confidence            69999998 9999999999998875  3479999997521  122211 11    122   245678899999999986 


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecCCCC
Q 018512          120 VPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVN  163 (354)
Q Consensus       120 ~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~-p~a~viv~tNPv~  163 (354)
                      .+.               .+.++++.+..+. |+.+|+..++.+.
T Consensus        72 ~~~---------------~~~~v~~~l~~~l~~~~~vvs~~~gi~  101 (247)
T 3gt0_A           72 KPD---------------LYASIINEIKEIIKNDAIIVTIAAGKS  101 (247)
T ss_dssp             CTT---------------THHHHC---CCSSCTTCEEEECSCCSC
T ss_pred             CHH---------------HHHHHHHHHHhhcCCCCEEEEecCCCC
Confidence            121               2345556666654 5665554445444

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*

Probab=97.46  E-value=0.00037  Score=64.31  Aligned_cols=148  Identities=14%  Similarity=0.063  Sum_probs=81.4

Q ss_pred             CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc--hhHHHHHhcCCCCCeEEEEe-CCCc---HHhhhC-----
Q 018512           41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFL-GQPQ---LENALT-----  109 (354)
Q Consensus        41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~--~g~~~dl~~~~~~~~v~~~~-~~~d---~~~al~-----  109 (354)
                      +.++|.|+||+|.+|.+++..|+..|.  +|+++|++..  .....++.... ...+..+. +-+|   +.++++     
T Consensus        25 ~~k~vlITGasggiG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~~  101 (302)
T 1w6u_A           25 QGKVAFITGGGTGLGKGMTTLLSSLGA--QCVIASRKMDVLKATAEQISSQT-GNKVHAIQCDVRDPDMVQNTVSELIKV  101 (302)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHHH-SSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHHhc-CCceEEEEeCCCCHHHHHHHHHHHHHH
Confidence            446899999999999999999999997  8999999752  22223332210 11222221 1122   223333     


Q ss_pred             --CCcEEEEcCCCCCCC---CCC---HHHHHHHHHHHHHHHHHHHhh----hCCCeEEEEecCCCCCchHHHHHHHHHhC
Q 018512          110 --GMDLVIIPAGVPRKP---GMT---RDDLFNINAGIVRTLCEGIAK----CCPNATVNLISNPVNSTVPIAAEVFKKAG  177 (354)
Q Consensus       110 --~aDvVIi~ag~~~~~---g~~---r~d~~~~n~~~~~~i~~~i~~----~~p~a~viv~tNPv~~~~~~~~~~~~~~~  177 (354)
                        ..|+||++||.....   ..+   ....+..|+.....+.+.+.+    ....+.|+++|.-.   .       ..  
T Consensus       102 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~---~-------~~--  169 (302)
T 1w6u_A          102 AGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIY---A-------ET--  169 (302)
T ss_dssp             TCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTH---H-------HH--
T ss_pred             cCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCEEEEEcccc---c-------cc--
Confidence              459999999864321   122   233456676665555444433    33456677665421   0       01  


Q ss_pred             CCCCCCEEEeccchHHHHHHHHHHHh
Q 018512          178 TYDPKKLLGVTMLDVVRANTFVAEVL  203 (354)
Q Consensus       178 ~~p~~kviG~t~ld~~r~~~~la~~l  203 (354)
                      +.++.-.++.+......+.+.++..+
T Consensus       170 ~~~~~~~Y~~sK~a~~~~~~~la~~~  195 (302)
T 1w6u_A          170 GSGFVVPSASAKAGVEAMSKSLAAEW  195 (302)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCcchhHHHHHHHHHHHHHHHHHh
Confidence            23333334444434445666666664

>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6

Probab=97.46  E-value=0.00045  Score=65.40  Aligned_cols=98  Identities=16%  Similarity=0.146  Sum_probs=59.5

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhH-HHHHhcC---CC-CCeEEEE-eCCCcHHhhhCCCcEEE
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGV-TADISHM---DT-GAVVRGF-LGQPQLENALTGMDLVI  115 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~-~~dl~~~---~~-~~~v~~~-~~~~d~~~al~~aDvVI  115 (354)
                      +|||+|||+ |.+|..++..|...|+  +|.++|+++.... ..+....   .. ....... ..+++++++++++|+||
T Consensus         4 ~mki~iiG~-G~~G~~~a~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~vi   80 (359)
T 1bg6_A            4 SKTYAVLGL-GNGGHAFAAYLALKGQ--SVLAWDIDAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLAVKDADVIL   80 (359)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTC--EEEEECSCHHHHHHHHHHTSEEEESSSCCEEECCSEEESCHHHHHTTCSEEE
T ss_pred             cCeEEEECC-CHHHHHHHHHHHhCCC--EEEEEeCCHHHHHHHHhcCCeEEeccccccccccceecCCHHHHHhcCCEEE
Confidence            479999999 9999999999998887  8999998752111 1111000   00 0000000 01246777889999999


Q ss_pred             EcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEe
Q 018512          116 IPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLI  158 (354)
Q Consensus       116 i~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~-p~a~viv~  158 (354)
                      ++.....                ..++++.+..+. ++.+|+..
T Consensus        81 ~~v~~~~----------------~~~~~~~l~~~l~~~~~vv~~  108 (359)
T 1bg6_A           81 IVVPAIH----------------HASIAANIASYISEGQLIILN  108 (359)
T ss_dssp             ECSCGGG----------------HHHHHHHHGGGCCTTCEEEES
T ss_pred             EeCCchH----------------HHHHHHHHHHhCCCCCEEEEc
Confidence            9853221                134556666554 56655555

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0

Probab=97.46  E-value=0.00038  Score=63.63  Aligned_cols=146  Identities=23%  Similarity=0.271  Sum_probs=82.1

Q ss_pred             CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCCCCeEEEE--eCCCcHHhhh-------C
Q 018512           41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGF--LGQPQLENAL-------T  109 (354)
Q Consensus        41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~~~~v~~~--~~~~d~~~al-------~  109 (354)
                      +.+++.|+||+|.+|.+++..|+..|.  +|++.|++.  ......++..   .......  ....+.++++       .
T Consensus        10 ~~k~vlVTGas~gIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~---~~~~~~~Dv~~~~~v~~~~~~~~~~~g   84 (271)
T 3tzq_B           10 ENKVAIITGACGGIGLETSRVLARAGA--RVVLADLPETDLAGAAASVGR---GAVHHVVDLTNEVSVRALIDFTIDTFG   84 (271)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEECTTSCHHHHHHHHCT---TCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC--EEEEEcCCHHHHHHHHHHhCC---CeEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            345899999999999999999999998  899999987  2223333311   1111111  0111222333       3


Q ss_pred             CCcEEEEcCCCCCC-CC----CC---HHHHHHHHHHHHHHHHHHH----hhhCCCeEEEEecCCCCCchHHHHHHHHHhC
Q 018512          110 GMDLVIIPAGVPRK-PG----MT---RDDLFNINAGIVRTLCEGI----AKCCPNATVNLISNPVNSTVPIAAEVFKKAG  177 (354)
Q Consensus       110 ~aDvVIi~ag~~~~-~g----~~---r~d~~~~n~~~~~~i~~~i----~~~~p~a~viv~tNPv~~~~~~~~~~~~~~~  177 (354)
                      ..|++|+.||.... ..    .+   ....+..|+.....+++.+    ++. ..+.|+++|......            
T Consensus        85 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-~~g~iv~isS~~~~~------------  151 (271)
T 3tzq_B           85 RLDIVDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTMLMCKYAIPRLISA-GGGAIVNISSATAHA------------  151 (271)
T ss_dssp             CCCEEEECCCCCCTTCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCEEEEEECCGGGTS------------
T ss_pred             CCCEEEECCCCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCCEEEEECCHHHcC------------
Confidence            89999999987522 11    12   2334566766555555554    443 456677665422111            


Q ss_pred             CCCCCCEEEeccchHHHHHHHHHHHhC
Q 018512          178 TYDPKKLLGVTMLDVVRANTFVAEVLG  204 (354)
Q Consensus       178 ~~p~~kviG~t~ld~~r~~~~la~~l~  204 (354)
                      +.+..-.++.+......+.+.+|..++
T Consensus       152 ~~~~~~~Y~asKaa~~~l~~~la~e~~  178 (271)
T 3tzq_B          152 AYDMSTAYACTKAAIETLTRYVATQYG  178 (271)
T ss_dssp             BCSSCHHHHHHHHHHHHHHHHHHHHHG
T ss_pred             CCCCChHHHHHHHHHHHHHHHHHHHHh
Confidence            222222333333334456677777753

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}

Probab=97.46  E-value=0.00083  Score=60.79  Aligned_cols=116  Identities=18%  Similarity=0.265  Sum_probs=68.1

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCCCCeEEEEe-CCCc---HHhhhC------
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQ---LENALT------  109 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~~~~v~~~~-~~~d---~~~al~------  109 (354)
                      .++|.|+||+|.+|..++..|+..|.  +|++.|++.  ......++........+..+. +-+|   ++++++      
T Consensus         7 ~k~vlVTGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   84 (260)
T 2z1n_A            7 GKLAVVTAGSSGLGFASALELARNGA--RLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIREPGDIDRLFEKARDLG   84 (260)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHTT
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEEccCCCHHHHHHHHHHHHHhc
Confidence            35899999999999999999999987  899999975  222223332110011222221 1122   233443      


Q ss_pred             CCcEEEEcCCCCCCC---CCC---HHHHHHHHHHHH----HHHHHHHhhhCCCeEEEEecC
Q 018512          110 GMDLVIIPAGVPRKP---GMT---RDDLFNINAGIV----RTLCEGIAKCCPNATVNLISN  160 (354)
Q Consensus       110 ~aDvVIi~ag~~~~~---g~~---r~d~~~~n~~~~----~~i~~~i~~~~p~a~viv~tN  160 (354)
                      +.|+||+.||.....   ..+   ....+..|+...    +.+.+.+++.. .+.||++|.
T Consensus        85 gid~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS  144 (260)
T 2z1n_A           85 GADILVYSTGGPRPGRFMELGVEDWDESYRLLARSAVWVGRRAAEQMVEKG-WGRMVYIGS  144 (260)
T ss_dssp             CCSEEEECCCCCCCBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHHT-CEEEEEECC
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEECc
Confidence            599999999865321   112   223445565554    55555555543 456666653

>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}

Probab=97.46  E-value=0.00062  Score=58.29  Aligned_cols=137  Identities=14%  Similarity=0.089  Sum_probs=78.8

Q ss_pred             CCCeEEEEcCCCchHHHHHHHHHhC-CCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCc---HHhh--hCCCcEE
Q 018512           41 AGFKVAILGAAGGIGQPLAMLMKIN-PLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQ---LENA--LTGMDLV  114 (354)
Q Consensus        41 ~~~kI~IiGa~G~vG~~~a~~l~~~-~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d---~~~a--l~~aDvV  114 (354)
                      ..++|+|+|+ |.+|..++..|... |.  +|+++|.++..  ...+..... ..+.+  ..++   +.++  +.++|+|
T Consensus        38 ~~~~v~IiG~-G~~G~~~a~~L~~~~g~--~V~vid~~~~~--~~~~~~~g~-~~~~g--d~~~~~~l~~~~~~~~ad~v  109 (183)
T 3c85_A           38 GHAQVLILGM-GRIGTGAYDELRARYGK--ISLGIEIREEA--AQQHRSEGR-NVISG--DATDPDFWERILDTGHVKLV  109 (183)
T ss_dssp             TTCSEEEECC-SHHHHHHHHHHHHHHCS--CEEEEESCHHH--HHHHHHTTC-CEEEC--CTTCHHHHHTBCSCCCCCEE
T ss_pred             CCCcEEEECC-CHHHHHHHHHHHhccCC--eEEEEECCHHH--HHHHHHCCC-CEEEc--CCCCHHHHHhccCCCCCCEE
Confidence            3569999998 99999999999887 87  89999997622  122222221 11211  1122   3444  7899999


Q ss_pred             EEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCCchHHHHHHHHHhCCCCCCCEEEeccchHHH
Q 018512          115 IIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVR  194 (354)
Q Consensus       115 Ii~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~~~~~~~~~~p~~kviG~t~ld~~r  194 (354)
                      |++.+..           ..|.    .++..+++.+|+..++..++-.+..     +.+.+. |.  +.++.-...-..+
T Consensus       110 i~~~~~~-----------~~~~----~~~~~~~~~~~~~~ii~~~~~~~~~-----~~l~~~-G~--~~vi~p~~~~a~~  166 (183)
T 3c85_A          110 LLAMPHH-----------QGNQ----TALEQLQRRNYKGQIAAIAEYPDQL-----EGLLES-GV--DAAFNIYSEAGSG  166 (183)
T ss_dssp             EECCSSH-----------HHHH----HHHHHHHHTTCCSEEEEEESSHHHH-----HHHHHH-TC--SEEEEHHHHHHHH
T ss_pred             EEeCCCh-----------HHHH----HHHHHHHHHCCCCEEEEEECCHHHH-----HHHHHc-CC--CEEEchHHHHHHH
Confidence            9974311           2233    3344566677877776665432211     233443 42  4565544433445


Q ss_pred             HHHHHHHHhCCCCC
Q 018512          195 ANTFVAEVLGLDPR  208 (354)
Q Consensus       195 ~~~~la~~l~v~~~  208 (354)
                      +...+.+.++.+..
T Consensus       167 l~~~~~~~~~~~~~  180 (183)
T 3c85_A          167 FARHVCKQLEPQFT  180 (183)
T ss_dssp             HHHHHHHHHCCCCC
T ss_pred             HHHHHHHhcCCccc
Confidence            55555566665543

>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*

Probab=97.46  E-value=0.00022  Score=63.18  Aligned_cols=94  Identities=16%  Similarity=0.157  Sum_probs=60.9

Q ss_pred             CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcCCC
Q 018512           41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGV  120 (354)
Q Consensus        41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~ag~  120 (354)
                      .+|||+|||+ |.+|..++..|...++  +|.++|+++..  ..++....    +...    ++.++++++|+||++...
T Consensus        27 ~~~~I~iiG~-G~~G~~la~~l~~~g~--~V~~~~r~~~~--~~~~~~~g----~~~~----~~~~~~~~~DvVi~av~~   93 (215)
T 2vns_A           27 EAPKVGILGS-GDFARSLATRLVGSGF--KVVVGSRNPKR--TARLFPSA----AQVT----FQEEAVSSPEVIFVAVFR   93 (215)
T ss_dssp             --CCEEEECC-SHHHHHHHHHHHHTTC--CEEEEESSHHH--HHHHSBTT----SEEE----EHHHHTTSCSEEEECSCG
T ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHCCC--EEEEEeCCHHH--HHHHHHcC----Ccee----cHHHHHhCCCEEEECCCh
Confidence            4579999998 9999999999998887  89999986521  22333221    2221    456889999999998542


Q ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCC
Q 018512          121 PRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNS  164 (354)
Q Consensus       121 ~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv~~  164 (354)
                      .    .. .+       ++ +    +....++.+|+.++|+...
T Consensus        94 ~----~~-~~-------v~-~----l~~~~~~~~vv~~s~g~~~  120 (215)
T 2vns_A           94 E----HY-SS-------LC-S----LSDQLAGKILVDVSNPTEQ  120 (215)
T ss_dssp             G----GS-GG-------GG-G----GHHHHTTCEEEECCCCCHH
T ss_pred             H----HH-HH-------HH-H----HHHhcCCCEEEEeCCCccc
Confidence            1    11 11       11 1    2222367888888888753

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}

Probab=97.45  E-value=0.0016  Score=59.74  Aligned_cols=156  Identities=13%  Similarity=0.141  Sum_probs=83.3

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC---chhHHHHHhcCCCCCeEEEEe-C---CCcHHhhhC-----
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN---TPGVTADISHMDTGAVVRGFL-G---QPQLENALT-----  109 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~---~~g~~~dl~~~~~~~~v~~~~-~---~~d~~~al~-----  109 (354)
                      .+++.|+||+|.+|.+++..|+..|.  +|++.|++.   ......++....  ..+..+. +   ..+.+++++     
T Consensus        29 ~k~~lVTGas~GIG~aia~~la~~G~--~V~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~~  104 (280)
T 4da9_A           29 RPVAIVTGGRRGIGLGIARALAASGF--DIAITGIGDAEGVAPVIAELSGLG--ARVIFLRADLADLSSHQATVDAVVAE  104 (280)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESCCHHHHHHHHHHHHHTT--CCEEEEECCTTSGGGHHHHHHHHHHH
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCC--eEEEEeCCCHHHHHHHHHHHHhcC--CcEEEEEecCCCHHHHHHHHHHHHHH
Confidence            45799999999999999999999998  899999754   222333444322  2222221 1   122333333     


Q ss_pred             --CCcEEEEcCCCCC--C-C--CCCHH---HHHHHHHH----HHHHHHHHHhhhCC--CeEEEEecCCCCCchHHHHHHH
Q 018512          110 --GMDLVIIPAGVPR--K-P--GMTRD---DLFNINAG----IVRTLCEGIAKCCP--NATVNLISNPVNSTVPIAAEVF  173 (354)
Q Consensus       110 --~aDvVIi~ag~~~--~-~--g~~r~---d~~~~n~~----~~~~i~~~i~~~~p--~a~viv~tNPv~~~~~~~~~~~  173 (354)
                        ..|++|+.||...  . +  ..+..   ..+.-|+.    ..+.+.+.+.+...  .+.||++|.-....        
T Consensus       105 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~g~Iv~isS~~~~~--------  176 (280)
T 4da9_A          105 FGRIDCLVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGTVFFTQAVLKAMLASDARASRSIINITSVSAVM--------  176 (280)
T ss_dssp             HSCCCEEEEECC------CCGGGCCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC------------
T ss_pred             cCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCCEEEEEcchhhcc--------
Confidence              7899999998731  1 1  11222   23334544    44555666665442  56777776433221        


Q ss_pred             HHhCCCCCCCEEEeccchHHHHHHHHHHHhCCCCCCCcceEE
Q 018512          174 KKAGTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVV  215 (354)
Q Consensus       174 ~~~~~~p~~kviG~t~ld~~r~~~~la~~l~v~~~~v~~~v~  215 (354)
                          +.|..-.++.+......+.+.+|..++  +..|++..+
T Consensus       177 ----~~~~~~~Y~asKaa~~~l~~~la~e~~--~~gI~vn~v  212 (280)
T 4da9_A          177 ----TSPERLDYCMSKAGLAAFSQGLALRLA--ETGIAVFEV  212 (280)
T ss_dssp             -------CCHHHHHHHHHHHHHHHHHHHHHT--TTTEEEEEE
T ss_pred             ----CCCCccHHHHHHHHHHHHHHHHHHHHH--HhCcEEEEE
Confidence                122222233333344556677777764  344544333

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}

Probab=97.45  E-value=0.00064  Score=62.50  Aligned_cols=146  Identities=18%  Similarity=0.170  Sum_probs=80.7

Q ss_pred             CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc--hhHHHHHhcCCCCCeEEEEeCCCcH---Hhh-------h
Q 018512           41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFLGQPQL---ENA-------L  108 (354)
Q Consensus        41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~--~g~~~dl~~~~~~~~v~~~~~~~d~---~~a-------l  108 (354)
                      +.+++.|+||+|.+|.+++..|+..|.  +|++.|++..  .....++..   ...... .+-+|.   +++       +
T Consensus        28 ~gk~vlVTGas~gIG~aia~~la~~G~--~V~~~~r~~~~~~~~~~~~~~---~~~~~~-~Dv~d~~~v~~~~~~~~~~~  101 (277)
T 3gvc_A           28 AGKVAIVTGAGAGIGLAVARRLADEGC--HVLCADIDGDAADAAATKIGC---GAAACR-VDVSDEQQIIAMVDACVAAF  101 (277)
T ss_dssp             TTCEEEETTTTSTHHHHHHHHHHHTTC--EEEEEESSHHHHHHHHHHHCS---SCEEEE-CCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHcCC---cceEEE-ecCCCHHHHHHHHHHHHHHc
Confidence            345799999999999999999999998  8999999762  222233311   111111 111222   222       3


Q ss_pred             CCCcEEEEcCCCCCCC---CCCH---HHHHHHHHHHHHHHHHHHhhh---CCCeEEEEecCCCCCchHHHHHHHHHhCCC
Q 018512          109 TGMDLVIIPAGVPRKP---GMTR---DDLFNINAGIVRTLCEGIAKC---CPNATVNLISNPVNSTVPIAAEVFKKAGTY  179 (354)
Q Consensus       109 ~~aDvVIi~ag~~~~~---g~~r---~d~~~~n~~~~~~i~~~i~~~---~p~a~viv~tNPv~~~~~~~~~~~~~~~~~  179 (354)
                      ...|++|+.||.....   ..+.   ...+..|+.....+.+.+..+   ...+.||++|......            +.
T Consensus       102 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~------------~~  169 (277)
T 3gvc_A          102 GGVDKLVANAGVVHLASLIDTTVEDFDRVIAINLRGAWLCTKHAAPRMIERGGGAIVNLSSLAGQV------------AV  169 (277)
T ss_dssp             SSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTS------------CC
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcc------------CC
Confidence            4789999999875321   1222   334556766544444443322   3456677776422111            23


Q ss_pred             CCCCEEEeccchHHHHHHHHHHHhC
Q 018512          180 DPKKLLGVTMLDVVRANTFVAEVLG  204 (354)
Q Consensus       180 p~~kviG~t~ld~~r~~~~la~~l~  204 (354)
                      |..-.++.+......+.+.+|..++
T Consensus       170 ~~~~~Y~asKaa~~~l~~~la~e~~  194 (277)
T 3gvc_A          170 GGTGAYGMSKAGIIQLSRITAAELR  194 (277)
T ss_dssp             TTBHHHHHHHHHHHHHHHHHHHHHG
T ss_pred             CCchhHHHHHHHHHHHHHHHHHHhc
Confidence            3222333333334456667777653

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A

Probab=97.45  E-value=0.00067  Score=61.34  Aligned_cols=115  Identities=16%  Similarity=0.116  Sum_probs=67.7

Q ss_pred             CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCCCCeEEEEe-CCCc---HHhhh------
Q 018512           41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQ---LENAL------  108 (354)
Q Consensus        41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~~~~v~~~~-~~~d---~~~al------  108 (354)
                      +.++|.|+||+|.+|..++..|+..|.  +|+++|++.  ......++....  ..+..+. +-.+   +++++      
T Consensus        13 ~~k~vlITGasggiG~~la~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~   88 (266)
T 1xq1_A           13 KAKTVLVTGGTKGIGHAIVEEFAGFGA--VIHTCARNEYELNECLSKWQKKG--FQVTGSVCDASLRPEREKLMQTVSSM   88 (266)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHTT--CCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcC--CeeEEEECCCCCHHHHHHHHHHHHHH
Confidence            346899999999999999999999997  899999875  222223333221  1222221 1122   22333      


Q ss_pred             --CCCcEEEEcCCCCCCC---CCC---HHHHHHHHHHHHHHHHHHH----hhhCCCeEEEEecC
Q 018512          109 --TGMDLVIIPAGVPRKP---GMT---RDDLFNINAGIVRTLCEGI----AKCCPNATVNLISN  160 (354)
Q Consensus       109 --~~aDvVIi~ag~~~~~---g~~---r~d~~~~n~~~~~~i~~~i----~~~~p~a~viv~tN  160 (354)
                        .+.|+||+.||.....   ..+   ....+..|+.....+.+.+    ++.. .+.||++|.
T Consensus        89 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~-~~~iv~isS  151 (266)
T 1xq1_A           89 FGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASG-CGNIIFMSS  151 (266)
T ss_dssp             HTTCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-SCEEEEEC-
T ss_pred             hCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEcc
Confidence              5789999999864321   122   2334566776666665555    4443 355666654

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0

Probab=97.45  E-value=0.0012  Score=58.96  Aligned_cols=150  Identities=15%  Similarity=0.153  Sum_probs=82.2

Q ss_pred             CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCC-CCCeEEEEeC-CCc---HHh-------
Q 018512           41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMD-TGAVVRGFLG-QPQ---LEN-------  106 (354)
Q Consensus        41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~-~~~~v~~~~~-~~d---~~~-------  106 (354)
                      +.+++.|+||+|.+|.+++..|+..|.  +|+++|++.  ......++.... ....+..... ..+   ..+       
T Consensus        13 ~~k~vlITGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~d~~~~~~~~~~~~~~~~   90 (247)
T 3i1j_A           13 KGRVILVTGAARGIGAAAARAYAAHGA--SVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLENATAQQYRELAARVEH   90 (247)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHTTSCCCEEEECCTTTCCHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC--EEEEEecCHHHHHHHHHHHHhcCCCCceEEEeccccCCHHHHHHHHHHHHH
Confidence            446899999999999999999999998  899999976  222233343322 1122221111 012   112       


Q ss_pred             hhCCCcEEEEcCCCCCCCC----CC---HHHHHHHHHHHHHHHHHHHhhh---CCCeEEEEecCCCCCchHHHHHHHHHh
Q 018512          107 ALTGMDLVIIPAGVPRKPG----MT---RDDLFNINAGIVRTLCEGIAKC---CPNATVNLISNPVNSTVPIAAEVFKKA  176 (354)
Q Consensus       107 al~~aDvVIi~ag~~~~~g----~~---r~d~~~~n~~~~~~i~~~i~~~---~p~a~viv~tNPv~~~~~~~~~~~~~~  176 (354)
                      .+...|++|+.||.....+    .+   ....+.-|+.....+.+.+..+   ...+.|+++|......           
T Consensus        91 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~-----------  159 (247)
T 3i1j_A           91 EFGRLDGLLHNASIIGPRTPLEQLPDEDFMQVMHVNVNATFMLTRALLPLLKRSEDASIAFTSSSVGRK-----------  159 (247)
T ss_dssp             HHSCCSEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSEEEEEECCGGGTS-----------
T ss_pred             hCCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCeEEEEcchhhcC-----------
Confidence            2347899999998643221    12   2234556665555555544322   2356677665422111           


Q ss_pred             CCCCCCCEEEeccchHHHHHHHHHHHhC
Q 018512          177 GTYDPKKLLGVTMLDVVRANTFVAEVLG  204 (354)
Q Consensus       177 ~~~p~~kviG~t~ld~~r~~~~la~~l~  204 (354)
                       +.+..-.++.+......+.+.++..+.
T Consensus       160 -~~~~~~~Y~~sK~a~~~~~~~la~e~~  186 (247)
T 3i1j_A          160 -GRANWGAYGVSKFATEGLMQTLADELE  186 (247)
T ss_dssp             -CCTTCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             -CCCCcchhHHHHHHHHHHHHHHHHHhc
Confidence             222222333333334456677777763

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A

Probab=97.45  E-value=0.00055  Score=62.48  Aligned_cols=158  Identities=14%  Similarity=0.119  Sum_probs=90.9

Q ss_pred             CCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC---chhHHHHHhcCCCCCeEEEEe-CCCc---HHhhh----
Q 018512           40 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN---TPGVTADISHMDTGAVVRGFL-GQPQ---LENAL----  108 (354)
Q Consensus        40 ~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~---~~g~~~dl~~~~~~~~v~~~~-~~~d---~~~al----  108 (354)
                      -+.+++.|+||+|.+|.+++..|+..|.  +|++.|.+.   ......++....  ..+..+. +-+|   .++++    
T Consensus        16 l~~k~~lVTGas~gIG~aia~~l~~~G~--~V~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~   91 (270)
T 3is3_A           16 LDGKVALVTGSGRGIGAAVAVHLGRLGA--KVVVNYANSTKDAEKVVSEIKALG--SDAIAIKADIRQVPEIVKLFDQAV   91 (270)
T ss_dssp             CTTCEEEESCTTSHHHHHHHHHHHHTTC--EEEEEESSCHHHHHHHHHHHHHTT--CCEEEEECCTTSHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCC--EEEEEcCCCHHHHHHHHHHHHhcC--CcEEEEEcCCCCHHHHHHHHHHHH
Confidence            3456899999999999999999999998  889988765   222333444322  2222221 1122   22222    


Q ss_pred             ---CCCcEEEEcCCCCCCCC---CC---HHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecCCCCCchHHHHHHHHHhCC
Q 018512          109 ---TGMDLVIIPAGVPRKPG---MT---RDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNSTVPIAAEVFKKAGT  178 (354)
Q Consensus       109 ---~~aDvVIi~ag~~~~~g---~~---r~d~~~~n~~~~~~i~~~i~~~~-p~a~viv~tNPv~~~~~~~~~~~~~~~~  178 (354)
                         ...|++|+.||......   .+   ....+.-|+.....+.+.+.++- +.+.||++|......           .+
T Consensus        92 ~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~  160 (270)
T 3is3_A           92 AHFGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTSSNTSKD-----------FS  160 (270)
T ss_dssp             HHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCTTTTT-----------CC
T ss_pred             HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEEeCchhcc-----------CC
Confidence               37899999998753221   12   23446678777777777766654 356666665433111           12


Q ss_pred             CCCCCEEEeccchHHHHHHHHHHHhCCCCCCCcceE
Q 018512          179 YDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPV  214 (354)
Q Consensus       179 ~p~~kviG~t~ld~~r~~~~la~~l~v~~~~v~~~v  214 (354)
                      .|..-.++.+......+.+.++..++  +..|++..
T Consensus       161 ~~~~~~Y~asKaa~~~~~~~la~e~~--~~gi~vn~  194 (270)
T 3is3_A          161 VPKHSLYSGSKGAVDSFVRIFSKDCG--DKKITVNA  194 (270)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHHG--GGTCEEEE
T ss_pred             CCCCchhHHHHHHHHHHHHHHHHHhc--ccCeEEEE
Confidence            23323344443334456677777764  34454433

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}

Probab=97.45  E-value=0.00032  Score=63.52  Aligned_cols=113  Identities=12%  Similarity=0.114  Sum_probs=68.8

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCCCCeEEEEe-CCCc---HHhhhC------
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQ---LENALT------  109 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~~~~v~~~~-~~~d---~~~al~------  109 (354)
                      .+++.|+||+|.+|.+++..|+..|.  .|++.|++.  ......++....  ..+..+. +-+|   .+++++      
T Consensus         7 ~k~vlVTGas~GIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~~g   82 (252)
T 3h7a_A            7 NATVAVIGAGDYIGAEIAKKFAAEGF--TVFAGRRNGEKLAPLVAEIEAAG--GRIVARSLDARNEDEVTAFLNAADAHA   82 (252)
T ss_dssp             SCEEEEECCSSHHHHHHHHHHHHTTC--EEEEEESSGGGGHHHHHHHHHTT--CEEEEEECCTTCHHHHHHHHHHHHHHS
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcC--CeEEEEECcCCCHHHHHHHHHHHHhhC
Confidence            45899999999999999999999998  899999986  333344444332  2333321 1122   223333      


Q ss_pred             CCcEEEEcCCCCCCCC---CCH---HHHHHHHHHH----HHHHHHHHhhhCCCeEEEEec
Q 018512          110 GMDLVIIPAGVPRKPG---MTR---DDLFNINAGI----VRTLCEGIAKCCPNATVNLIS  159 (354)
Q Consensus       110 ~aDvVIi~ag~~~~~g---~~r---~d~~~~n~~~----~~~i~~~i~~~~p~a~viv~t  159 (354)
                      ..|++|+.||......   .+.   ...+.-|+..    .+.+.+.+++.. .+.||++|
T Consensus        83 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~is  141 (252)
T 3h7a_A           83 PLEVTIFNVGANVNFPILETTDRVFRKVWEMACWAGFVSGRESARLMLAHG-QGKIFFTG  141 (252)
T ss_dssp             CEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEEE
T ss_pred             CceEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEEC
Confidence            6799999999754211   222   2344556444    445555555543 45666665

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2

Probab=97.44  E-value=0.0006  Score=61.88  Aligned_cols=114  Identities=14%  Similarity=0.162  Sum_probs=67.1

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCCCCeEEEEe-CCCcH---Hhh-------h
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQL---ENA-------L  108 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~~~~v~~~~-~~~d~---~~a-------l  108 (354)
                      .+++.|+||+|.+|..++..|+..|.  +|+++|++.  ......++....  ..+..+. +-+|.   +++       +
T Consensus         7 ~k~vlVTGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~   82 (262)
T 1zem_A            7 GKVCLVTGAGGNIGLATALRLAEEGT--AIALLDMNREALEKAEASVREKG--VEARSYVCDVTSEEAVIGTVDSVVRDF   82 (262)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHTTT--SCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcC--CcEEEEEecCCCHHHHHHHHHHHHHHh
Confidence            45899999999999999999999997  899999875  222233443322  1222221 11222   122       2


Q ss_pred             CCCcEEEEcCCCC-CCC---CCCH---HHHHHHHHHHHHHHH----HHHhhhCCCeEEEEecC
Q 018512          109 TGMDLVIIPAGVP-RKP---GMTR---DDLFNINAGIVRTLC----EGIAKCCPNATVNLISN  160 (354)
Q Consensus       109 ~~aDvVIi~ag~~-~~~---g~~r---~d~~~~n~~~~~~i~----~~i~~~~p~a~viv~tN  160 (354)
                      ...|+||+.||.. ...   ..+.   ...+.-|+.....+.    +.+.+.. .+.||++|.
T Consensus        83 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS  144 (262)
T 1zem_A           83 GKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQN-YGRIVNTAS  144 (262)
T ss_dssp             SCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECC
T ss_pred             CCCCEEEECCCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEcc
Confidence            3789999999865 211   1122   234455655444444    4444332 466676653

>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6

Probab=97.44  E-value=0.00042  Score=64.56  Aligned_cols=76  Identities=18%  Similarity=0.288  Sum_probs=55.5

Q ss_pred             CeEEEEc-CCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcCCCC
Q 018512           43 FKVAILG-AAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVP  121 (354)
Q Consensus        43 ~kI~IiG-a~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~ag~~  121 (354)
                      +||+||| + |.+|..++..|...|+  +|.++|+++.                      .+..+++++||+||++....
T Consensus        22 ~~I~iIGg~-G~mG~~la~~l~~~G~--~V~~~~~~~~----------------------~~~~~~~~~aDvVilavp~~   76 (298)
T 2pv7_A           22 HKIVIVGGY-GKLGGLFARYLRASGY--PISILDREDW----------------------AVAESILANADVVIVSVPIN   76 (298)
T ss_dssp             CCEEEETTT-SHHHHHHHHHHHTTTC--CEEEECTTCG----------------------GGHHHHHTTCSEEEECSCGG
T ss_pred             CEEEEEcCC-CHHHHHHHHHHHhCCC--eEEEEECCcc----------------------cCHHHHhcCCCEEEEeCCHH
Confidence            4899999 7 9999999999998887  8999998642                      03457889999999985221


Q ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEec
Q 018512          122 RKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLIS  159 (354)
Q Consensus       122 ~~~g~~r~d~~~~n~~~~~~i~~~i~~~~-p~a~viv~t  159 (354)
                                      .+.++++.+..+. |+.+|+.++
T Consensus        77 ----------------~~~~vl~~l~~~l~~~~iv~~~~   99 (298)
T 2pv7_A           77 ----------------LTLETIERLKPYLTENMLLADLT   99 (298)
T ss_dssp             ----------------GHHHHHHHHGGGCCTTSEEEECC
T ss_pred             ----------------HHHHHHHHHHhhcCCCcEEEECC
Confidence                            1445555665544 567665553

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*

Probab=97.44  E-value=0.00042  Score=62.37  Aligned_cols=113  Identities=18%  Similarity=0.201  Sum_probs=67.3

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCCCCeEEEEe-CCCc---HHhh-------h
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQ---LENA-------L  108 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~~~~v~~~~-~~~d---~~~a-------l  108 (354)
                      .+++.|+||+|.+|..++..|+..|.  +|++.|++.  ......++....  ..+..+. +-+|   .+++       +
T Consensus         7 ~k~~lVTGas~gIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dv~~~~~~~~~~~~~~~~~   82 (247)
T 2jah_A            7 GKVALITGASSGIGEATARALAAEGA--AVAIAARRVEKLRALGDELTAAG--AKVHVLELDVADRQGVDAAVASTVEAL   82 (247)
T ss_dssp             TCEEEEESCSSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHhcC--CcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            35899999999999999999999998  899999875  222233343221  1222221 1122   2222       2


Q ss_pred             CCCcEEEEcCCCCCCC---CCCH---HHHHHHHHHHHHHH----HHHHhhhCCCeEEEEecC
Q 018512          109 TGMDLVIIPAGVPRKP---GMTR---DDLFNINAGIVRTL----CEGIAKCCPNATVNLISN  160 (354)
Q Consensus       109 ~~aDvVIi~ag~~~~~---g~~r---~d~~~~n~~~~~~i----~~~i~~~~p~a~viv~tN  160 (354)
                      .+.|++|+.||.....   ..+.   ...+.-|+.....+    .+.+.+..  +.||++|.
T Consensus        83 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~--g~iv~isS  142 (247)
T 2jah_A           83 GGLDILVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLMYMTRAALPHLLRSK--GTVVQMSS  142 (247)
T ss_dssp             SCCSEEEECCCCCCCCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEECC
T ss_pred             CCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCC--CEEEEEcc
Confidence            4899999999865321   1222   23455565544444    44444443  66776654

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=97.44  E-value=6e-05  Score=67.37  Aligned_cols=110  Identities=15%  Similarity=0.086  Sum_probs=66.5

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhh---------CCCcE
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENAL---------TGMDL  113 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al---------~~aDv  113 (354)
                      ++|.|+||+|.+|..++..|+..|.  +|++.|+++.... ... .. ...++.   ...+.++++         .+.|+
T Consensus         4 k~vlITGas~gIG~~~a~~l~~~G~--~V~~~~r~~~~~~-~~~-~~-~~~D~~---~~~~~~~~~~~~~~~~~~g~id~   75 (236)
T 1ooe_A            4 GKVIVYGGKGALGSAILEFFKKNGY--TVLNIDLSANDQA-DSN-IL-VDGNKN---WTEQEQSILEQTASSLQGSQVDG   75 (236)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTE--EEEEEESSCCTTS-SEE-EE-CCTTSC---HHHHHHHHHHHHHHHHTTCCEEE
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCC--EEEEEecCccccc-ccc-EE-EeCCCC---CHHHHHHHHHHHHHHhCCCCCCE
Confidence            5799999999999999999999987  8999999762110 000 00 000010   001122222         37999


Q ss_pred             EEEcCCCCCCC----CCC---HHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecC
Q 018512          114 VIIPAGVPRKP----GMT---RDDLFNINAGIVRTLCEGIAKCC-PNATVNLISN  160 (354)
Q Consensus       114 VIi~ag~~~~~----g~~---r~d~~~~n~~~~~~i~~~i~~~~-p~a~viv~tN  160 (354)
                      ||+.||.....    ..+   ....+..|+.....+.+.+.++. ..+.|+++|.
T Consensus        76 lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS  130 (236)
T 1ooe_A           76 VFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGA  130 (236)
T ss_dssp             EEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECC
T ss_pred             EEECCcccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEECc
Confidence            99999864321    111   23445677777767666666543 2467777764

>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*

Probab=97.43  E-value=0.0002  Score=68.43  Aligned_cols=69  Identities=14%  Similarity=0.288  Sum_probs=47.3

Q ss_pred             eEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhH-HHHHh-cCCC------CCeEEEEeCCCcHHhhhCCCcEEE
Q 018512           44 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGV-TADIS-HMDT------GAVVRGFLGQPQLENALTGMDLVI  115 (354)
Q Consensus        44 kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~-~~dl~-~~~~------~~~v~~~~~~~d~~~al~~aDvVI  115 (354)
                      ||+|||+ |.+|..++..|...|+  +|.++|+++.... ..+.. ....      ...+..   ++++.++++++|+||
T Consensus        17 kI~iIG~-G~mG~~la~~L~~~G~--~V~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~aDvVi   90 (366)
T 1evy_A           17 KAVVFGS-GAFGTALAMVLSKKCR--EVCVWHMNEEEVRLVNEKRENVLFLKGVQLASNITF---TSDVEKAYNGAEIIL   90 (366)
T ss_dssp             EEEEECC-SHHHHHHHHHHTTTEE--EEEEECSCHHHHHHHHHHTBCTTTSTTCBCCTTEEE---ESCHHHHHTTCSSEE
T ss_pred             eEEEECC-CHHHHHHHHHHHhCCC--EEEEEECCHHHHHHHHHcCcccccccccccccceee---eCCHHHHHcCCCEEE
Confidence            8999999 9999999999998887  8999998752111 11111 0000      112333   246677899999999


Q ss_pred             EcC
Q 018512          116 IPA  118 (354)
Q Consensus       116 i~a  118 (354)
                      ++.
T Consensus        91 lav   93 (366)
T 1evy_A           91 FVI   93 (366)
T ss_dssp             ECC
T ss_pred             ECC
Confidence            984

>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*

Probab=97.43  E-value=0.0013  Score=54.84  Aligned_cols=72  Identities=14%  Similarity=0.173  Sum_probs=47.0

Q ss_pred             CCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHh-cCCCCCeEEEEeCCCc---HHhh-hCCCcEE
Q 018512           40 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADIS-HMDTGAVVRGFLGQPQ---LENA-LTGMDLV  114 (354)
Q Consensus        40 ~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~-~~~~~~~v~~~~~~~d---~~~a-l~~aDvV  114 (354)
                      .+.++|+|+|+ |.+|+.++..|...|.  +|+++|.++...  ..+. ..  ...+. .....+   +.++ ++++|+|
T Consensus        17 ~~~~~v~IiG~-G~iG~~la~~L~~~g~--~V~vid~~~~~~--~~~~~~~--g~~~~-~~d~~~~~~l~~~~~~~ad~V   88 (155)
T 2g1u_A           17 QKSKYIVIFGC-GRLGSLIANLASSSGH--SVVVVDKNEYAF--HRLNSEF--SGFTV-VGDAAEFETLKECGMEKADMV   88 (155)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHHTTC--EEEEEESCGGGG--GGSCTTC--CSEEE-ESCTTSHHHHHTTTGGGCSEE
T ss_pred             cCCCcEEEECC-CHHHHHHHHHHHhCCC--eEEEEECCHHHH--HHHHhcC--CCcEE-EecCCCHHHHHHcCcccCCEE
Confidence            34579999998 9999999999998887  899999976221  1122 11  11111 111122   2333 6789999


Q ss_pred             EEcCC
Q 018512          115 IIPAG  119 (354)
Q Consensus       115 Ii~ag  119 (354)
                      |++.+
T Consensus        89 i~~~~   93 (155)
T 2g1u_A           89 FAFTN   93 (155)
T ss_dssp             EECSS
T ss_pred             EEEeC
Confidence            99864

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}

Probab=97.43  E-value=0.0021  Score=58.13  Aligned_cols=150  Identities=14%  Similarity=0.115  Sum_probs=83.4

Q ss_pred             CCCCeEEEEcCCC-chHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCCCCeEEEEe-CCCc---HHhhh----
Q 018512           40 AAGFKVAILGAAG-GIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQ---LENAL----  108 (354)
Q Consensus        40 ~~~~kI~IiGa~G-~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~~~~v~~~~-~~~d---~~~al----  108 (354)
                      -+.+++.|+||+| .+|.+++..|+..|.  .|++.|++.  ......++.... ...+..+. +-+|   .++++    
T Consensus        20 l~~k~vlITGasg~GIG~~~a~~l~~~G~--~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dl~~~~~v~~~~~~~~   96 (266)
T 3o38_A           20 LKGKVVLVTAAAGTGIGSTTARRALLEGA--DVVISDYHERRLGETRDQLADLG-LGRVEAVVCDVTSTEAVDALITQTV   96 (266)
T ss_dssp             TTTCEEEESSCSSSSHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHTTC-SSCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCCchHHHHHHHHHHCCC--EEEEecCCHHHHHHHHHHHHhcC-CCceEEEEeCCCCHHHHHHHHHHHH
Confidence            3456899999977 499999999999997  899999976  222334443322 12333321 1122   22223    


Q ss_pred             ---CCCcEEEEcCCCCCCCC---CCH---HHHHHHHHHHHHH----HHHHHhhhCCCeEEEEecCCCCCchHHHHHHHHH
Q 018512          109 ---TGMDLVIIPAGVPRKPG---MTR---DDLFNINAGIVRT----LCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKK  175 (354)
Q Consensus       109 ---~~aDvVIi~ag~~~~~g---~~r---~d~~~~n~~~~~~----i~~~i~~~~p~a~viv~tNPv~~~~~~~~~~~~~  175 (354)
                         ...|+||+.||......   .+.   ...+..|+.....    +.+.+++....+.|+++|......          
T Consensus        97 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~----------  166 (266)
T 3o38_A           97 EKAGRLDVLVNNAGLGGQTPVVDMTDEEWDRVLNVTLTSVMRATRAALRYFRGVDHGGVIVNNASVLGWR----------  166 (266)
T ss_dssp             HHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSCCEEEEEECCGGGTC----------
T ss_pred             HHhCCCcEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeCCHHHcC----------
Confidence               36799999999653221   222   2344556544444    444454444567777765422111          


Q ss_pred             hCCCCCCCEEEeccchHHHHHHHHHHHhC
Q 018512          176 AGTYDPKKLLGVTMLDVVRANTFVAEVLG  204 (354)
Q Consensus       176 ~~~~p~~kviG~t~ld~~r~~~~la~~l~  204 (354)
                        +.+..-.++.+......+.+.++..+.
T Consensus       167 --~~~~~~~Y~~sKaa~~~~~~~la~e~~  193 (266)
T 3o38_A          167 --AQHSQSHYAAAKAGVMALTRCSAIEAV  193 (266)
T ss_dssp             --CCTTCHHHHHHHHHHHHHHHHHHHHHG
T ss_pred             --CCCCCchHHHHHHHHHHHHHHHHHHHH
Confidence              223222334443334456666776653

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}

Probab=97.43  E-value=0.0021  Score=59.05  Aligned_cols=147  Identities=15%  Similarity=0.121  Sum_probs=81.8

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC---chhHHHHHhcCCCCCeEEEEe-CCCc---HHhhh------
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN---TPGVTADISHMDTGAVVRGFL-GQPQ---LENAL------  108 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~---~~g~~~dl~~~~~~~~v~~~~-~~~d---~~~al------  108 (354)
                      .+++.|+||+|.+|.+++..|+..|.  +|++.|++.   ......++.... ...+..+. +-+|   .++++      
T Consensus        25 ~k~~lVTGas~GIG~~ia~~la~~G~--~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~Dv~d~~~v~~~~~~~~~~  101 (281)
T 3v2h_A           25 TKTAVITGSTSGIGLAIARTLAKAGA--NIVLNGFGAPDEIRTVTDEVAGLS-SGTVLHHPADMTKPSEIADMMAMVADR  101 (281)
T ss_dssp             TCEEEEETCSSHHHHHHHHHHHHTTC--EEEEECCCCHHHHHHHHHHHHTTC-SSCEEEECCCTTCHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEeCCChHHHHHHHHHHhhcc-CCcEEEEeCCCCCHHHHHHHHHHHHHH
Confidence            35799999999999999999999998  899999854   222333443321 12233221 1122   22222      


Q ss_pred             -CCCcEEEEcCCCCCCCC---CCH---HHHHHHHHHHHHHHH----HHHhhhCCCeEEEEecCCCCCchHHHHHHHHHhC
Q 018512          109 -TGMDLVIIPAGVPRKPG---MTR---DDLFNINAGIVRTLC----EGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAG  177 (354)
Q Consensus       109 -~~aDvVIi~ag~~~~~g---~~r---~d~~~~n~~~~~~i~----~~i~~~~p~a~viv~tNPv~~~~~~~~~~~~~~~  177 (354)
                       ...|++|+.||......   .+.   ...+.-|+.....+.    +.+++.. .+.||++|......            
T Consensus       102 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~------------  168 (281)
T 3v2h_A          102 FGGADILVNNAGVQFVEKIEDFPVEQWDRIIAVNLSSSFHTIRGAIPPMKKKG-WGRIINIASAHGLV------------  168 (281)
T ss_dssp             TSSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTS------------
T ss_pred             CCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEECCccccc------------
Confidence             37899999999754221   122   234555655544444    4445443 46666665422111            


Q ss_pred             CCCCCCEEEeccchHHHHHHHHHHHhC
Q 018512          178 TYDPKKLLGVTMLDVVRANTFVAEVLG  204 (354)
Q Consensus       178 ~~p~~kviG~t~ld~~r~~~~la~~l~  204 (354)
                      +.|..-.++.+......+.+.+|..++
T Consensus       169 ~~~~~~~Y~asKaa~~~l~~~la~e~~  195 (281)
T 3v2h_A          169 ASPFKSAYVAAKHGIMGLTKTVALEVA  195 (281)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHHHHHHHG
T ss_pred             CCCCchHHHHHHHHHHHHHHHHHHHhh
Confidence            222222333333334456677777763

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*

Probab=97.43  E-value=0.00038  Score=63.89  Aligned_cols=158  Identities=18%  Similarity=0.155  Sum_probs=85.9

Q ss_pred             CCCeEEEEcCCCc--hHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCc---HHhhh-------
Q 018512           41 AGFKVAILGAAGG--IGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQ---LENAL-------  108 (354)
Q Consensus        41 ~~~kI~IiGa~G~--vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d---~~~al-------  108 (354)
                      +.++|.|+||+|+  +|..++..|+..|.  +|++.|++.......++........... .+-++   .++++       
T Consensus        25 ~~k~vlVTGasg~~GIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~l~~~~~~~~~~~-~Dl~~~~~v~~~~~~~~~~~  101 (280)
T 3nrc_A           25 AGKKILITGLLSNKSIAYGIAKAMHREGA--ELAFTYVGQFKDRVEKLCAEFNPAAVLP-CDVISDQEIKDLFVELGKVW  101 (280)
T ss_dssp             TTCEEEECCCCSTTCHHHHHHHHHHHTTC--EEEEEECTTCHHHHHHHHGGGCCSEEEE-CCTTCHHHHHHHHHHHHHHC
T ss_pred             CCCEEEEECCCCCCCHHHHHHHHHHHcCC--EEEEeeCchHHHHHHHHHHhcCCceEEE-eecCCHHHHHHHHHHHHHHc
Confidence            3468999999867  99999999999997  8999999863333344433211111111 11122   22222       


Q ss_pred             CCCcEEEEcCCCCCCC---C-----CC---HHHHHHHHHHHHHHHHHHHhhhC--CCeEEEEecCCCCCchHHHHHHHHH
Q 018512          109 TGMDLVIIPAGVPRKP---G-----MT---RDDLFNINAGIVRTLCEGIAKCC--PNATVNLISNPVNSTVPIAAEVFKK  175 (354)
Q Consensus       109 ~~aDvVIi~ag~~~~~---g-----~~---r~d~~~~n~~~~~~i~~~i~~~~--p~a~viv~tNPv~~~~~~~~~~~~~  175 (354)
                      ...|+||+.||.....   +     .+   ....+..|+.....+.+.+..+-  ..+.|+++|......          
T Consensus       102 g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~----------  171 (280)
T 3nrc_A          102 DGLDAIVHSIAFAPRDQLEGNFIDCVTREGFSIAHDISAYSFAALAKEGRSMMKNRNASMVALTYIGAEK----------  171 (280)
T ss_dssp             SSCCEEEECCCCCCGGGSSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECGGGTS----------
T ss_pred             CCCCEEEECCccCCCcccCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEecccccc----------
Confidence            3579999999875421   1     12   22345667666555555554431  246666665422111          


Q ss_pred             hCCCCCCCEEEeccchHHHHHHHHHHHhCCCCCCCcceEE
Q 018512          176 AGTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVV  215 (354)
Q Consensus       176 ~~~~p~~kviG~t~ld~~r~~~~la~~l~v~~~~v~~~v~  215 (354)
                        +.|..-.++.+......+.+.++..++  +..|++..+
T Consensus       172 --~~~~~~~Y~asKaal~~~~~~la~e~~--~~gi~v~~v  207 (280)
T 3nrc_A          172 --AMPSYNTMGVAKASLEATVRYTALALG--EDGIKVNAV  207 (280)
T ss_dssp             --CCTTTHHHHHHHHHHHHHHHHHHHHHG--GGTCEEEEE
T ss_pred             --CCCCchhhHHHHHHHHHHHHHHHHHHH--HcCcEEEEE
Confidence              223222334433334456667777664  334444333

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*

Probab=97.43  E-value=0.00046  Score=61.88  Aligned_cols=147  Identities=17%  Similarity=0.129  Sum_probs=80.2

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecC-C--chhHHHHHhcCCCCCeEEEEe-CCCc---HHhhhC-----
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVV-N--TPGVTADISHMDTGAVVRGFL-GQPQ---LENALT-----  109 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~-~--~~g~~~dl~~~~~~~~v~~~~-~~~d---~~~al~-----  109 (354)
                      .++|.|+||+|++|++++..|+..|.  +|+++|++ .  ......++....  ..+..+. +-.|   ++++++     
T Consensus         7 ~k~vlVTGasggiG~~~a~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~   82 (258)
T 3afn_B            7 GKRVLITGSSQGIGLATARLFARAGA--KVGLHGRKAPANIDETIASMRADG--GDAAFFAADLATSEACQQLVDEFVAK   82 (258)
T ss_dssp             TCEEEETTCSSHHHHHHHHHHHHTTC--EEEEEESSCCTTHHHHHHHHHHTT--CEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCC--EEEEECCCchhhHHHHHHHHHhcC--CceEEEECCCCCHHHHHHHHHHHHHH
Confidence            35899999999999999999999987  89999997 4  222233343221  2233221 1122   233444     


Q ss_pred             --CCcEEEEcCCC-CCCC---CCC---HHHHHHHHHHHHHHHHH----HHhhh----CCCeEEEEecCCCCCchHHHHHH
Q 018512          110 --GMDLVIIPAGV-PRKP---GMT---RDDLFNINAGIVRTLCE----GIAKC----CPNATVNLISNPVNSTVPIAAEV  172 (354)
Q Consensus       110 --~aDvVIi~ag~-~~~~---g~~---r~d~~~~n~~~~~~i~~----~i~~~----~p~a~viv~tNPv~~~~~~~~~~  172 (354)
                        +.|+||++||. ....   ..+   ....+..|+.....+.+    .+.+.    .+.+.|++++.-.   .      
T Consensus        83 ~g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~---~------  153 (258)
T 3afn_B           83 FGGIDVLINNAGGLVGRKPLPEIDDTFYDAVMDANIRSVVMTTKFALPHLAAAAKASGQTSAVISTGSIA---G------  153 (258)
T ss_dssp             HSSCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTSCEEEEEECCTH---H------
T ss_pred             cCCCCEEEECCCCcCCcCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcccCCCCCcEEEEecchh---h------
Confidence              89999999986 3211   112   22344556555444444    44332    2236666665311   0      


Q ss_pred             HHHhCCCCCCCEEEeccchHHHHHHHHHHHh
Q 018512          173 FKKAGTYDPKKLLGVTMLDVVRANTFVAEVL  203 (354)
Q Consensus       173 ~~~~~~~p~~kviG~t~ld~~r~~~~la~~l  203 (354)
                        ...+.|+.-.++.+......+.+.+++.+
T Consensus       154 --~~~~~~~~~~Y~~sK~a~~~~~~~~~~e~  182 (258)
T 3afn_B          154 --HTGGGPGAGLYGAAKAFLHNVHKNWVDFH  182 (258)
T ss_dssp             --HHCCCTTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             --ccCCCCCchHHHHHHHHHHHHHHHHHHhh
Confidence              11123333334444433445666666665

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2

Probab=97.43  E-value=0.00086  Score=60.59  Aligned_cols=111  Identities=17%  Similarity=0.213  Sum_probs=66.6

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhH-HHHHhcCCCCCeEEEEeCCCc---HHhh-------hCC
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGV-TADISHMDTGAVVRGFLGQPQ---LENA-------LTG  110 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~-~~dl~~~~~~~~v~~~~~~~d---~~~a-------l~~  110 (354)
                      .++|.|+||+|.+|.+++..|+..|.  +|++.|++..... ..++.    ...+.  .+-+|   ++++       +..
T Consensus         6 ~k~vlVTGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~----~~~~~--~D~~~~~~~~~~~~~~~~~~g~   77 (256)
T 2d1y_A            6 GKGVLVTGGARGIGRAIAQAFAREGA--LVALCDLRPEGKEVAEAIG----GAFFQ--VDLEDERERVRFVEEAAYALGR   77 (256)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESSTTHHHHHHHHT----CEEEE--CCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCC--EEEEEeCChhHHHHHHHhh----CCEEE--eeCCCHHHHHHHHHHHHHHcCC
Confidence            45899999999999999999999997  8999999763211 12222    10011  11112   2222       347


Q ss_pred             CcEEEEcCCCCCCC---CCC---HHHHHHHHHHHHHHHHHHHhhh---CCCeEEEEecC
Q 018512          111 MDLVIIPAGVPRKP---GMT---RDDLFNINAGIVRTLCEGIAKC---CPNATVNLISN  160 (354)
Q Consensus       111 aDvVIi~ag~~~~~---g~~---r~d~~~~n~~~~~~i~~~i~~~---~p~a~viv~tN  160 (354)
                      .|+||+.||.....   ..+   ....+..|+.....+.+.+.++   ...+.||++|.
T Consensus        78 iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS  136 (256)
T 2d1y_A           78 VDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVAS  136 (256)
T ss_dssp             CCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECC
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcc
Confidence            89999999865321   122   2344566766655555544332   23466777654

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G

Probab=97.43  E-value=0.00027  Score=62.98  Aligned_cols=114  Identities=19%  Similarity=0.234  Sum_probs=66.0

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEE-ecCC--chhHHHHHhcCCCCCeEEEEe-CCCc---HHhhhC------
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLY-DVVN--TPGVTADISHMDTGAVVRGFL-GQPQ---LENALT------  109 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~-D~~~--~~g~~~dl~~~~~~~~v~~~~-~~~d---~~~al~------  109 (354)
                      ++|.|+||+|.+|..++..|+..|.  +|++. +++.  ......++....  ..+..+. +-+|   ++++++      
T Consensus         2 k~vlVTGasggiG~~la~~l~~~G~--~v~~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~   77 (244)
T 1edo_A            2 PVVVVTGASRGIGKAIALSLGKAGC--KVLVNYARSAKAAEEVSKQIEAYG--GQAITFGGDVSKEADVEAMMKTAIDAW   77 (244)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTC--EEEEEESSCHHHHHHHHHHHHHHT--CEEEEEECCTTSHHHHHHHHHHHHHHS
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCC--EEEEEcCCCHHHHHHHHHHHHhcC--CcEEEEeCCCCCHHHHHHHHHHHHHHc
Confidence            4799999999999999999999987  78874 6654  122222332211  2222221 1122   233333      


Q ss_pred             -CCcEEEEcCCCCCCCC---CC---HHHHHHHHHHHHHHHHHHHhhh---CCCeEEEEecC
Q 018512          110 -GMDLVIIPAGVPRKPG---MT---RDDLFNINAGIVRTLCEGIAKC---CPNATVNLISN  160 (354)
Q Consensus       110 -~aDvVIi~ag~~~~~g---~~---r~d~~~~n~~~~~~i~~~i~~~---~p~a~viv~tN  160 (354)
                       +.|+||+.||......   .+   ....+..|+.....+.+.+.++   ...+.||++|.
T Consensus        78 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS  138 (244)
T 1edo_A           78 GTIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIAS  138 (244)
T ss_dssp             SCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECC
T ss_pred             CCCCEEEECCCCCCCcCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCEEEEECC
Confidence             7899999998754321   12   2334566766655555444432   23466666654

>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}

Probab=97.42  E-value=0.00032  Score=65.71  Aligned_cols=119  Identities=11%  Similarity=0.109  Sum_probs=70.7

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCC----CCeEEEEeCCCcHHhhhCCCcEEEEc
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDT----GAVVRGFLGQPQLENALTGMDLVIIP  117 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~----~~~v~~~~~~~d~~~al~~aDvVIi~  117 (354)
                      +|||+|||+ |.+|..++..|. .+.  +|.++++++...  ..+.....    .........+.+ .++..++|+||++
T Consensus         2 ~mkI~IiGa-Ga~G~~~a~~L~-~g~--~V~~~~r~~~~~--~~l~~~G~~~~~~~~~~~~~~~~~-~~~~~~~D~vila   74 (307)
T 3ego_A            2 SLKIGIIGG-GSVGLLCAYYLS-LYH--DVTVVTRRQEQA--AAIQSEGIRLYKGGEEFRADCSAD-TSINSDFDLLVVT   74 (307)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHH-TTS--EEEEECSCHHHH--HHHHHHCEEEEETTEEEEECCEEE-SSCCSCCSEEEEC
T ss_pred             CCEEEEECC-CHHHHHHHHHHh-cCC--ceEEEECCHHHH--HHHHhCCceEecCCCeeccccccc-ccccCCCCEEEEE
Confidence            479999999 999999999998 776  999999875211  11111110    000000000111 2457899999998


Q ss_pred             CCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCCchHHHHHHHHHhCCCCCCCEEEe-ccch
Q 018512          118 AGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLD  191 (354)
Q Consensus       118 ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~~~~~~~~~~p~~kviG~-t~ld  191 (354)
                      .-..                .+.++++.++...++. |+.+.|-++..     +.+.+  -+|..+|++- +...
T Consensus        75 vK~~----------------~~~~~l~~l~~~~~~~-ivs~~nGi~~~-----e~l~~--~~~~~~vl~g~~~~~  125 (307)
T 3ego_A           75 VKQH----------------QLQSVFSSLERIGKTN-ILFLQNGMGHI-----HDLKD--WHVGHSIYVGIVEHG  125 (307)
T ss_dssp             CCGG----------------GHHHHHHHTTSSCCCE-EEECCSSSHHH-----HHHHT--CCCSCEEEEEEECCE
T ss_pred             eCHH----------------HHHHHHHHhhcCCCCe-EEEecCCccHH-----HHHHH--hCCCCcEEEEEEeec
Confidence            4211                1334556666555666 77778877643     22344  2677788665 5543

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}

Probab=97.41  E-value=0.0019  Score=61.50  Aligned_cols=158  Identities=16%  Similarity=0.164  Sum_probs=91.5

Q ss_pred             CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc---------hhHHHHHhcCCCCCeEEEEe-CCCc---HHhh
Q 018512           41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT---------PGVTADISHMDTGAVVRGFL-GQPQ---LENA  107 (354)
Q Consensus        41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~---------~g~~~dl~~~~~~~~v~~~~-~~~d---~~~a  107 (354)
                      +.+++.|+||+|.+|..++..|+..|.  +|++.|++..         .....++....  ..+..+. +-+|   .+++
T Consensus        44 ~gk~vlVTGas~GIG~aia~~La~~Ga--~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g--~~~~~~~~Dv~d~~~v~~~  119 (346)
T 3kvo_A           44 AGCTVFITGASRGIGKAIALKAAKDGA--NIVIAAKTAQPHPKLLGTIYTAAEEIEAVG--GKALPCIVDVRDEQQISAA  119 (346)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHTTTC--EEEEEESCCSCCSSSCCCHHHHHHHHHHTT--CEEEEEECCTTCHHHHHHH
T ss_pred             CCCEEEEeCCChHHHHHHHHHHHHCCC--EEEEEECChhhhhhhHHHHHHHHHHHHhcC--CeEEEEEccCCCHHHHHHH
Confidence            346899999999999999999999987  8999998762         12233343322  2222221 1122   2222


Q ss_pred             h-------CCCcEEEEcCCCCCCC---CCC---HHHHHHHHHHHHHHHHHHHhhh---CCCeEEEEecCCCCCchHHHHH
Q 018512          108 L-------TGMDLVIIPAGVPRKP---GMT---RDDLFNINAGIVRTLCEGIAKC---CPNATVNLISNPVNSTVPIAAE  171 (354)
Q Consensus       108 l-------~~aDvVIi~ag~~~~~---g~~---r~d~~~~n~~~~~~i~~~i~~~---~p~a~viv~tNPv~~~~~~~~~  171 (354)
                      +       .+.|+||+.||.....   ..+   ....+.-|+.....+.+.+..+   ...+.||++|.+......    
T Consensus       120 ~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~~~~~~~----  195 (346)
T 3kvo_A          120 VEKAIKKFGGIDILVNNASAISLTNTLDTPTKRLDLMMNVNTRGTYLASKACIPYLKKSKVAHILNISPPLNLNPV----  195 (346)
T ss_dssp             HHHHHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTCSSCEEEEECCCCCCCGG----
T ss_pred             HHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCCEEEEECCHHHcCCC----
Confidence            3       3899999999865322   122   2334566766665655555433   235678888766544320    


Q ss_pred             HHHHhCCCCCCCEEEeccchHHHHHHHHHHHhCCCCCCCcceEE
Q 018512          172 VFKKAGTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVV  215 (354)
Q Consensus       172 ~~~~~~~~p~~kviG~t~ld~~r~~~~la~~l~v~~~~v~~~v~  215 (354)
                            .++..-.++.+...-..+.+.+|..++   ..|++..+
T Consensus       196 ------~~~~~~~Y~aSKaal~~l~~~la~e~~---~gIrvn~v  230 (346)
T 3kvo_A          196 ------WFKQHCAYTIAKYGMSMYVLGMAEEFK---GEIAVNAL  230 (346)
T ss_dssp             ------GTSSSHHHHHHHHHHHHHHHHHHHHTT---TTCEEEEE
T ss_pred             ------CCCCchHHHHHHHHHHHHHHHHHHHhc---CCcEEEEE
Confidence                  022222333333334556778888886   34544444

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}

Probab=97.41  E-value=0.0005  Score=60.98  Aligned_cols=153  Identities=16%  Similarity=0.098  Sum_probs=82.4

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc--hhHHHHHhcCCCCCeEEEE--eCCCcHHhhhCCC----cEE
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGF--LGQPQLENALTGM----DLV  114 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~--~g~~~dl~~~~~~~~v~~~--~~~~d~~~al~~a----DvV  114 (354)
                      ++|.|+||+|.+|..++..|+..|.  +|++.|++..  .....++   .........  ....+.+++++..    |+|
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~--~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~~~d~l   76 (230)
T 3guy_A            2 SLIVITGASSGLGAELAKLYDAEGK--ATYLTGRSESKLSTVTNCL---SNNVGYRARDLASHQEVEQLFEQLDSIPSTV   76 (230)
T ss_dssp             -CEEEESTTSHHHHHHHHHHHHTTC--CEEEEESCHHHHHHHHHTC---SSCCCEEECCTTCHHHHHHHHHSCSSCCSEE
T ss_pred             CEEEEecCCchHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHH---hhccCeEeecCCCHHHHHHHHHHHhhcCCEE
Confidence            3699999999999999999999997  7999999752  1112222   111111111  1111233344333    999


Q ss_pred             EEcCCCCCCCC---CC---HHHHHHHHHHHHHHHHHHHhhhC-C-CeEEEEecCCCCCchHHHHHHHHHhCCCCCCCEEE
Q 018512          115 IIPAGVPRKPG---MT---RDDLFNINAGIVRTLCEGIAKCC-P-NATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLG  186 (354)
Q Consensus       115 Ii~ag~~~~~g---~~---r~d~~~~n~~~~~~i~~~i~~~~-p-~a~viv~tNPv~~~~~~~~~~~~~~~~~p~~kviG  186 (354)
                      |+.||......   .+   ....+..|+.....+.+.+.+.. . .+.|+++|.....            .+.|..-.++
T Consensus        77 v~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~iv~isS~~~~------------~~~~~~~~Y~  144 (230)
T 3guy_A           77 VHSAGSGYFGLLQEQDPEQIQTLIENNLSSAINVLRELVKRYKDQPVNVVMIMSTAAQ------------QPKAQESTYC  144 (230)
T ss_dssp             EECCCCCCCSCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCEEEEECCGGGT------------SCCTTCHHHH
T ss_pred             EEeCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeecccC------------CCCCCCchhH
Confidence            99998653221   22   23345667666666666555432 1 2355555532211            1222222333


Q ss_pred             eccchHHHHHHHHHHHhCCCCCCCcceE
Q 018512          187 VTMLDVVRANTFVAEVLGLDPRDVDVPV  214 (354)
Q Consensus       187 ~t~ld~~r~~~~la~~l~v~~~~v~~~v  214 (354)
                      .+......+.+.++..++  +..|++..
T Consensus       145 asKaa~~~~~~~la~e~~--~~gi~v~~  170 (230)
T 3guy_A          145 AVKWAVKGLIESVRLELK--GKPMKIIA  170 (230)
T ss_dssp             HHHHHHHHHHHHHHHHTT--TSSCEEEE
T ss_pred             HHHHHHHHHHHHHHHHHH--hcCeEEEE
Confidence            443344566777787775  34454433

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*

Probab=97.41  E-value=0.00069  Score=60.87  Aligned_cols=104  Identities=16%  Similarity=0.206  Sum_probs=66.3

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchh---HHHHHhcCCCCCeEEEEeCCCcHHhhh----CCCcEEE
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPG---VTADISHMDTGAVVRGFLGQPQLENAL----TGMDLVI  115 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g---~~~dl~~~~~~~~v~~~~~~~d~~~al----~~aDvVI  115 (354)
                      ++|.|+||+|.+|..++..|+..|.  +|++.|++....   ...|+.+.            .+.++++    ...|+||
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~--~V~~~~r~~~~~~~~~~~Dl~~~------------~~v~~~~~~~~~~id~lv   67 (257)
T 1fjh_A            2 SIIVISGCATGIGAATRKVLEAAGH--QIVGIDIRDAEVIADLSTAEGRK------------QAIADVLAKCSKGMDGLV   67 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESSSSSEECCTTSHHHHH------------HHHHHHHTTCTTCCSEEE
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCC--EEEEEeCCchhhccccccCCCCH------------HHHHHHHHHhCCCCCEEE
Confidence            4699999999999999999999987  899999876211   11122211            1233344    3559999


Q ss_pred             EcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhh---CCCeEEEEecCC
Q 018512          116 IPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKC---CPNATVNLISNP  161 (354)
Q Consensus       116 i~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~---~p~a~viv~tNP  161 (354)
                      +.||..... ....+.+..|+.....+.+.+.++   ...+.||++|..
T Consensus        68 ~~Ag~~~~~-~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~  115 (257)
T 1fjh_A           68 LCAGLGPQT-KVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSV  115 (257)
T ss_dssp             ECCCCCTTC-SSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCG
T ss_pred             ECCCCCCCc-ccHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEECCh
Confidence            999875412 224556677766665555555432   223566666543

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}

Probab=97.40  E-value=0.00084  Score=62.27  Aligned_cols=148  Identities=16%  Similarity=0.128  Sum_probs=82.6

Q ss_pred             CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--------------chhHHHHHhcCCCCCeEEEEe-CCCc--
Q 018512           41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--------------TPGVTADISHMDTGAVVRGFL-GQPQ--  103 (354)
Q Consensus        41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--------------~~g~~~dl~~~~~~~~v~~~~-~~~d--  103 (354)
                      +.+.+.|+||+|.+|..++..|+..|.  .|+++|+++              ......++....  ..+..+. +-+|  
T Consensus        27 ~gk~~lVTGas~GIG~aia~~la~~G~--~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~  102 (299)
T 3t7c_A           27 EGKVAFITGAARGQGRSHAITLAREGA--DIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALG--RRIIASQVDVRDFD  102 (299)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC--EEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTT--CCEEEEECCTTCHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC--EEEEEecccccccccccccCHHHHHHHHHHHHhcC--CceEEEECCCCCHH
Confidence            345899999999999999999999998  899999862              111222333322  2222221 1122  


Q ss_pred             -HHhh-------hCCCcEEEEcCCCCCCCC----CCH---HHHHHHHHHHH----HHHHHHHhhhCCCeEEEEecCCCCC
Q 018512          104 -LENA-------LTGMDLVIIPAGVPRKPG----MTR---DDLFNINAGIV----RTLCEGIAKCCPNATVNLISNPVNS  164 (354)
Q Consensus       104 -~~~a-------l~~aDvVIi~ag~~~~~g----~~r---~d~~~~n~~~~----~~i~~~i~~~~p~a~viv~tNPv~~  164 (354)
                       .+++       +...|++|+.||......    .+.   ...+..|+...    +.+.+.+++....+.||++|.-...
T Consensus       103 ~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~Iv~isS~~~~  182 (299)
T 3t7c_A          103 AMQAAVDDGVTQLGRLDIVLANAALASEGTRLNRMDPKTWRDMIDVNLNGAWITARVAIPHIMAGKRGGSIVFTSSIGGL  182 (299)
T ss_dssp             HHHHHHHHHHHHHSCCCEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTSCEEEEEECCGGGT
T ss_pred             HHHHHHHHHHHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhc
Confidence             2222       247999999998653221    222   33455565444    4444455544556777777642211


Q ss_pred             chHHHHHHHHHhCCCCCCCEEEeccchHHHHHHHHHHHhC
Q 018512          165 TVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEVLG  204 (354)
Q Consensus       165 ~~~~~~~~~~~~~~~p~~kviG~t~ld~~r~~~~la~~l~  204 (354)
                      .            +.|..-.++.+......+.+.+|..++
T Consensus       183 ~------------~~~~~~~Y~asKaa~~~l~~~la~e~~  210 (299)
T 3t7c_A          183 R------------GAENIGNYIASKHGLHGLMRTMALELG  210 (299)
T ss_dssp             S------------CCTTCHHHHHHHHHHHHHHHHHHHHHG
T ss_pred             c------------CCCCcchHHHHHHHHHHHHHHHHHHhc
Confidence            1            222222233333333456677777763

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*

Probab=97.40  E-value=0.00042  Score=62.94  Aligned_cols=111  Identities=17%  Similarity=0.271  Sum_probs=68.0

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc--hhHHHHHhcCCCCCeEEEEe-CCC---cHHhhhC------
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFL-GQP---QLENALT------  109 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~--~g~~~dl~~~~~~~~v~~~~-~~~---d~~~al~------  109 (354)
                      .++|.|+||+|.+|..++..|+..|.  +|++.|++..  .....++..     .+..+. +-+   +++++++      
T Consensus         7 ~k~vlVTGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~-----~~~~~~~D~~~~~~v~~~~~~~~~~~   79 (260)
T 1nff_A            7 GKVALVSGGARGMGASHVRAMVAEGA--KVVFGDILDEEGKAMAAELAD-----AARYVHLDVTQPAQWKAAVDTAVTAF   79 (260)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHTGG-----GEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHhhc-----CceEEEecCCCHHHHHHHHHHHHHHc
Confidence            45899999999999999999999998  8999998752  212222221     122111 111   2333444      


Q ss_pred             -CCcEEEEcCCCCCCC---CCC---HHHHHHHHHHHH----HHHHHHHhhhCCCeEEEEecC
Q 018512          110 -GMDLVIIPAGVPRKP---GMT---RDDLFNINAGIV----RTLCEGIAKCCPNATVNLISN  160 (354)
Q Consensus       110 -~aDvVIi~ag~~~~~---g~~---r~d~~~~n~~~~----~~i~~~i~~~~p~a~viv~tN  160 (354)
                       +.|+||+.||.....   ..+   ....+..|+...    +.+.+.+++.. .+.|+++|.
T Consensus        80 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS  140 (260)
T 1nff_A           80 GGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAG-RGSIINISS  140 (260)
T ss_dssp             SCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECC
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCEEEEEee
Confidence             899999999865321   122   233455666555    56666666553 456666653

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}

Probab=97.40  E-value=0.0036  Score=57.97  Aligned_cols=149  Identities=17%  Similarity=0.189  Sum_probs=84.1

Q ss_pred             CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCCCCeEEEEe-CCCcH---H-------hh
Q 018512           41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQL---E-------NA  107 (354)
Q Consensus        41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~~~~v~~~~-~~~d~---~-------~a  107 (354)
                      +.+++.|+||+|.+|..++..|+..|.  +|++.|++.  ......++.... ...+..+. +-+|.   +       +.
T Consensus        40 ~~k~vlVTGas~GIG~aia~~la~~G~--~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dv~d~~~v~~~~~~~~~~  116 (293)
T 3rih_A           40 SARSVLVTGGTKGIGRGIATVFARAGA--NVAVAARSPRELSSVTAELGELG-AGNVIGVRLDVSDPGSCADAARTVVDA  116 (293)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC--EEEEEESSGGGGHHHHHHHTTSS-SSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHhhC-CCcEEEEEEeCCCHHHHHHHHHHHHHH
Confidence            446899999999999999999999998  899999986  333344554432 12233321 11222   1       22


Q ss_pred             hCCCcEEEEcCCCCCCC---CCCH---HHHHHHHHHHHHHHHHH----HhhhCCCeEEEEecCCCCCchHHHHHHHHHhC
Q 018512          108 LTGMDLVIIPAGVPRKP---GMTR---DDLFNINAGIVRTLCEG----IAKCCPNATVNLISNPVNSTVPIAAEVFKKAG  177 (354)
Q Consensus       108 l~~aDvVIi~ag~~~~~---g~~r---~d~~~~n~~~~~~i~~~----i~~~~p~a~viv~tNPv~~~~~~~~~~~~~~~  177 (354)
                      +...|++|+.||.....   ..+.   ...+.-|+.....+.+.    +++.. .+.||++|.-....           .
T Consensus       117 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~iV~isS~~~~~-----------~  184 (293)
T 3rih_A          117 FGALDVVCANAGIFPEARLDTMTPEQLSEVLDVNVKGTVYTVQACLAPLTASG-RGRVILTSSITGPV-----------T  184 (293)
T ss_dssp             HSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHS-SCEEEEECCSBTTT-----------B
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEEeChhhcc-----------C
Confidence            34779999999865321   1222   23455666555444444    45544 35555555322211           1


Q ss_pred             CCCCCCEEEeccchHHHHHHHHHHHhC
Q 018512          178 TYDPKKLLGVTMLDVVRANTFVAEVLG  204 (354)
Q Consensus       178 ~~p~~kviG~t~ld~~r~~~~la~~l~  204 (354)
                      +.|..-.++.+......+.+.+|..++
T Consensus       185 ~~~~~~~Y~asKaa~~~l~~~la~e~~  211 (293)
T 3rih_A          185 GYPGWSHYGASKAAQLGFMRTAAIELA  211 (293)
T ss_dssp             BCTTCHHHHHHHHHHHHHHHHHHHHHG
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHHh
Confidence            223222333333334556677777763

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}

Probab=97.40  E-value=0.00027  Score=64.90  Aligned_cols=113  Identities=18%  Similarity=0.174  Sum_probs=67.3

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCCCCeEEEEe-CCCc---HHhhhC-------
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQ---LENALT-------  109 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~~~~v~~~~-~~~d---~~~al~-------  109 (354)
                      +++.|+||+|.+|..++..|+..|.  +|++.|++.  ......++...   ..+..+. +-+|   .+++++       
T Consensus        22 k~vlVTGas~gIG~aia~~La~~G~--~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~Dv~d~~~v~~~~~~~~~~~g   96 (272)
T 2nwq_A           22 STLFITGATSGFGEACARRFAEAGW--SLVLTGRREERLQALAGELSAK---TRVLPLTLDVRDRAAMSAAVDNLPEEFA   96 (272)
T ss_dssp             CEEEESSTTTSSHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHTTT---SCEEEEECCTTCHHHHHHHHHTCCGGGS
T ss_pred             cEEEEeCCCCHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHhhcC---CcEEEEEcCCCCHHHHHHHHHHHHHHhC
Confidence            4799999999999999999999997  899999975  22222333321   1222221 1122   233344       


Q ss_pred             CCcEEEEcCCCCCC--C--CCCH---HHHHHHHHHH----HHHHHHHHhhhCCCeEEEEecC
Q 018512          110 GMDLVIIPAGVPRK--P--GMTR---DDLFNINAGI----VRTLCEGIAKCCPNATVNLISN  160 (354)
Q Consensus       110 ~aDvVIi~ag~~~~--~--g~~r---~d~~~~n~~~----~~~i~~~i~~~~p~a~viv~tN  160 (354)
                      ..|++|+.||....  +  ..+.   ...+..|+..    .+.+.+.+++....+.||++|.
T Consensus        97 ~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~~IV~isS  158 (272)
T 2nwq_A           97 TLRGLINNAGLALGTDPAQSCDLDDWDTMVDTNIKGLLYSTRLLLPRLIAHGAGASIVNLGS  158 (272)
T ss_dssp             SCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCTTCEEEEECC
T ss_pred             CCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeCC
Confidence            35999999987532  1  1222   2344556554    5556666665544425666653

>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6

Probab=97.40  E-value=0.00056  Score=63.22  Aligned_cols=65  Identities=18%  Similarity=0.230  Sum_probs=48.0

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcCC
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG  119 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~ag  119 (354)
                      |||+|||+ |.+|..++..|...++  +|.++|+++..  ...+....    +..   ..+++++++++|+||++..
T Consensus         6 m~i~iiG~-G~~G~~~a~~l~~~g~--~V~~~~~~~~~--~~~~~~~g----~~~---~~~~~~~~~~~D~vi~~v~   70 (299)
T 1vpd_A            6 MKVGFIGL-GIMGKPMSKNLLKAGY--SLVVSDRNPEA--IADVIAAG----AET---ASTAKAIAEQCDVIITMLP   70 (299)
T ss_dssp             CEEEEECC-STTHHHHHHHHHHTTC--EEEEECSCHHH--HHHHHHTT----CEE---CSSHHHHHHHCSEEEECCS
T ss_pred             ceEEEECc-hHHHHHHHHHHHhCCC--EEEEEeCCHHH--HHHHHHCC----Cee---cCCHHHHHhCCCEEEEECC
Confidence            69999998 9999999999998887  89999987521  12222221    222   3466788899999999853

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}

Probab=97.39  E-value=0.00089  Score=62.75  Aligned_cols=148  Identities=15%  Similarity=0.153  Sum_probs=82.3

Q ss_pred             CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--------------chhHHHHHhcCCCCCeEEEEe-CCCc--
Q 018512           41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--------------TPGVTADISHMDTGAVVRGFL-GQPQ--  103 (354)
Q Consensus        41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--------------~~g~~~dl~~~~~~~~v~~~~-~~~d--  103 (354)
                      +.+++.|+||+|.+|..++..|+..|.  +|+++|++.              .......+....  ..+..+. +-+|  
T Consensus        45 ~gk~~lVTGas~GIG~aia~~la~~G~--~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~d~~  120 (317)
T 3oec_A           45 QGKVAFITGAARGQGRTHAVRLAQDGA--DIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQG--RRIIARQADVRDLA  120 (317)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTC--EEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTT--CCEEEEECCTTCHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC--eEEEEecccccccccccccCHHHHHHHHHHHHhcC--CeEEEEECCCCCHH
Confidence            345789999999999999999999998  899999762              111112222221  2222221 1122  


Q ss_pred             -HHhhh-------CCCcEEEEcCCCCCCC---CCCH---HHHHHHHHHH----HHHHHHHHhhhCCCeEEEEecCCCCCc
Q 018512          104 -LENAL-------TGMDLVIIPAGVPRKP---GMTR---DDLFNINAGI----VRTLCEGIAKCCPNATVNLISNPVNST  165 (354)
Q Consensus       104 -~~~al-------~~aDvVIi~ag~~~~~---g~~r---~d~~~~n~~~----~~~i~~~i~~~~p~a~viv~tNPv~~~  165 (354)
                       .++.+       ...|++|+.||.....   ..+.   ...+..|+..    .+.+.+.+.+....+.||++|......
T Consensus       121 ~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~g~Iv~isS~~~~~  200 (317)
T 3oec_A          121 SLQAVVDEALAEFGHIDILVSNVGISNQGEVVSLTDQQWSDILQTNLIGAWHACRAVLPSMIERGQGGSVIFVSSTVGLR  200 (317)
T ss_dssp             HHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTCSCEEEEEECCGGGSS
T ss_pred             HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCCEEEEECcHHhcC
Confidence             22222       3789999999875321   1222   2345556544    444555555555567777776432211


Q ss_pred             hHHHHHHHHHhCCCCCCCEEEeccchHHHHHHHHHHHhC
Q 018512          166 VPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEVLG  204 (354)
Q Consensus       166 ~~~~~~~~~~~~~~p~~kviG~t~ld~~r~~~~la~~l~  204 (354)
                                  +.|..-.++.+......+.+.+|..++
T Consensus       201 ------------~~~~~~~Y~asKaa~~~l~~~la~e~~  227 (317)
T 3oec_A          201 ------------GAPGQSHYAASKHGVQGLMLSLANEVG  227 (317)
T ss_dssp             ------------CCTTBHHHHHHHHHHHHHHHHHHHHHG
T ss_pred             ------------CCCCCcchHHHHHHHHHHHHHHHHHHh
Confidence                        222222333333334456677777763

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2

Probab=97.39  E-value=0.0015  Score=60.01  Aligned_cols=115  Identities=16%  Similarity=0.269  Sum_probs=68.3

Q ss_pred             CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCCCCeEEEEe-CCCc---HHhhh------
Q 018512           41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQ---LENAL------  108 (354)
Q Consensus        41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~~~~v~~~~-~~~d---~~~al------  108 (354)
                      +.++|.|+||+|.+|..++..|+..|.  +|++++++.  ......++....  ..+..+. +-+|   +++++      
T Consensus        43 ~~k~vlITGasggIG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dl~d~~~v~~~~~~~~~~  118 (285)
T 2c07_A           43 ENKVALVTGAGRGIGREIAKMLAKSVS--HVICISRTQKSCDSVVDEIKSFG--YESSGYAGDVSKKEEISEVINKILTE  118 (285)
T ss_dssp             SSCEEEEESTTSHHHHHHHHHHTTTSS--EEEEEESSHHHHHHHHHHHHTTT--CCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHcCC--EEEEEcCCHHHHHHHHHHHHhcC--CceeEEECCCCCHHHHHHHHHHHHHh
Confidence            346899999999999999999998887  899988765  222233444322  2222221 1122   22222      


Q ss_pred             -CCCcEEEEcCCCCCCC---CCC---HHHHHHHHHHH----HHHHHHHHhhhCCCeEEEEecC
Q 018512          109 -TGMDLVIIPAGVPRKP---GMT---RDDLFNINAGI----VRTLCEGIAKCCPNATVNLISN  160 (354)
Q Consensus       109 -~~aDvVIi~ag~~~~~---g~~---r~d~~~~n~~~----~~~i~~~i~~~~p~a~viv~tN  160 (354)
                       .+.|+||..||.....   ..+   ..+.+..|+..    .+.+.+.+++.. .+.||++|.
T Consensus       119 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~~~iv~isS  180 (285)
T 2c07_A          119 HKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNR-YGRIINISS  180 (285)
T ss_dssp             CSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHT-CEEEEEECC
T ss_pred             cCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC-CCEEEEECC
Confidence             4789999999875321   122   23345666665    444445444443 456666654

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}

Probab=97.39  E-value=0.00026  Score=64.06  Aligned_cols=144  Identities=17%  Similarity=0.177  Sum_probs=80.7

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc--hhHHHHHhcCCCCCeEEEEe-CCCc---HHhhh-------
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFL-GQPQ---LENAL-------  108 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~--~g~~~dl~~~~~~~~v~~~~-~~~d---~~~al-------  108 (354)
                      .+++.|+||+|.+|.+++..|+..|.  +|+++|++..  .....++..     .+..+. +-+|   .++++       
T Consensus         9 ~k~vlITGas~gIG~~~a~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~-----~~~~~~~D~~~~~~~~~~~~~~~~~~   81 (261)
T 3n74_A            9 GKVALITGAGSGFGEGMAKRFAKGGA--KVVIVDRDKAGAERVAGEIGD-----AALAVAADISKEADVDAAVEAALSKF   81 (261)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHCT-----TEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCC--EEEEEcCCHHHHHHHHHHhCC-----ceEEEEecCCCHHHHHHHHHHHHHhc
Confidence            45899999999999999999999997  8999999762  222222311     111111 1122   22333       


Q ss_pred             CCCcEEEEcCCCCCCCC----CCH---HHHHHHHHHH----HHHHHHHHhhhC---CCeEEEEecCCCCCchHHHHHHHH
Q 018512          109 TGMDLVIIPAGVPRKPG----MTR---DDLFNINAGI----VRTLCEGIAKCC---PNATVNLISNPVNSTVPIAAEVFK  174 (354)
Q Consensus       109 ~~aDvVIi~ag~~~~~g----~~r---~d~~~~n~~~----~~~i~~~i~~~~---p~a~viv~tNPv~~~~~~~~~~~~  174 (354)
                      ...|++|+.||.....+    .+.   ...+..|+..    .+.+.+.+++..   ..+.|+++|......         
T Consensus        82 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~iv~isS~~~~~---------  152 (261)
T 3n74_A           82 GKVDILVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYLMTSKLIPHFKENGAKGQECVILNVASTGAGR---------  152 (261)
T ss_dssp             SCCCEEEECCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTTTTS---------
T ss_pred             CCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEeCchhhcC---------
Confidence            37899999998754222    122   2234455444    555555555543   256677776433221         


Q ss_pred             HhCCCCCCCEEEeccchHHHHHHHHHHHhC
Q 018512          175 KAGTYDPKKLLGVTMLDVVRANTFVAEVLG  204 (354)
Q Consensus       175 ~~~~~p~~kviG~t~ld~~r~~~~la~~l~  204 (354)
                         +.|..-.++.+......+.+.++..+.
T Consensus       153 ---~~~~~~~Y~asKaa~~~~~~~la~e~~  179 (261)
T 3n74_A          153 ---PRPNLAWYNATKGWVVSVTKALAIELA  179 (261)
T ss_dssp             ---CCTTCHHHHHHHHHHHHHHHHHHHHHG
T ss_pred             ---CCCCccHHHHHHHHHHHHHHHHHHHhh
Confidence               122222233333334456677777663

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}

Probab=97.38  E-value=0.00015  Score=63.00  Aligned_cols=110  Identities=15%  Similarity=0.174  Sum_probs=68.8

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc--hhHHHHHhcCCCCCeEEEEeCCCcHHhhhC---CCcEEEEc
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFLGQPQLENALT---GMDLVIIP  117 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~--~g~~~dl~~~~~~~~v~~~~~~~d~~~al~---~aDvVIi~  117 (354)
                      ++|.|+||+|++|+.++..|+..    +|+++|+++.  .....++.......++   ....++.++++   +.|+||++
T Consensus         1 k~vlVtGasg~iG~~la~~l~~~----~V~~~~r~~~~~~~~~~~~~~~~~~~D~---~~~~~~~~~~~~~~~id~vi~~   73 (207)
T 2yut_A            1 MRVLITGATGGLGGAFARALKGH----DLLLSGRRAGALAELAREVGARALPADL---ADELEAKALLEEAGPLDLLVHA   73 (207)
T ss_dssp             CEEEEETTTSHHHHHHHHHTTTS----EEEEECSCHHHHHHHHHHHTCEECCCCT---TSHHHHHHHHHHHCSEEEEEEC
T ss_pred             CEEEEEcCCcHHHHHHHHHHHhC----CEEEEECCHHHHHHHHHhccCcEEEeeC---CCHHHHHHHHHhcCCCCEEEEC
Confidence            47999999999999999999876    8999998752  1122222110000111   01123345555   89999999


Q ss_pred             CCCCCCC------CCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecC
Q 018512          118 AGVPRKP------GMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISN  160 (354)
Q Consensus       118 ag~~~~~------g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tN  160 (354)
                      ||.....      .......+..|+.....+.+.+.+. ..+.|+++|.
T Consensus        74 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~iv~~sS  121 (207)
T 2yut_A           74 VGKAGRASVREAGRDLVEEMLAAHLLTAAFVLKHARFQ-KGARAVFFGA  121 (207)
T ss_dssp             CCCCCCBCSCC---CHHHHHHHHHHHHHHHHHHHCCEE-EEEEEEEECC
T ss_pred             CCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHhc-CCcEEEEEcC
Confidence            9865321      1123456678888888888888433 3456666654

>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}

Probab=97.38  E-value=0.00081  Score=62.17  Aligned_cols=66  Identities=14%  Similarity=0.353  Sum_probs=48.5

Q ss_pred             CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcC
Q 018512           41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA  118 (354)
Q Consensus        41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~a  118 (354)
                      ++|||+|||+ |.+|..++..|...++  +|+++|+++..  ...+.+..    +..   ..+++++++++|+||++.
T Consensus         3 ~~~~i~iiG~-G~~G~~~a~~l~~~g~--~V~~~~~~~~~--~~~~~~~g----~~~---~~~~~~~~~~~D~vi~~v   68 (301)
T 3cky_A            3 KSIKIGFIGL-GAMGKPMAINLLKEGV--TVYAFDLMEAN--VAAVVAQG----AQA---CENNQKVAAASDIIFTSL   68 (301)
T ss_dssp             -CCEEEEECC-CTTHHHHHHHHHHTTC--EEEEECSSHHH--HHHHHTTT----CEE---CSSHHHHHHHCSEEEECC
T ss_pred             CCCEEEEECc-cHHHHHHHHHHHHCCC--eEEEEeCCHHH--HHHHHHCC----Cee---cCCHHHHHhCCCEEEEEC
Confidence            3579999998 9999999999998887  89999987521  12233221    222   246678889999999984

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2

Probab=97.38  E-value=0.00091  Score=61.00  Aligned_cols=115  Identities=14%  Similarity=0.181  Sum_probs=66.9

Q ss_pred             CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHH-hcCCCCCeEEEEe-CCCc---HHhhh-----
Q 018512           41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADI-SHMDTGAVVRGFL-GQPQ---LENAL-----  108 (354)
Q Consensus        41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl-~~~~~~~~v~~~~-~~~d---~~~al-----  108 (354)
                      +.+++.|+||+|.+|..++..|+..|.  +|++.|++.  ......++ ....  ..+..+. +-+|   +++++     
T Consensus        20 ~~k~~lVTGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~l~~~~~--~~~~~~~~Dl~~~~~v~~~~~~~~~   95 (267)
T 1vl8_A           20 RGRVALVTGGSRGLGFGIAQGLAEAGC--SVVVASRNLEEASEAAQKLTEKYG--VETMAFRCDVSNYEEVKKLLEAVKE   95 (267)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHHHC--CCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHHhcC--CeEEEEEcCCCCHHHHHHHHHHHHH
Confidence            345899999999999999999999997  899999875  22222333 1111  1122211 1122   22223     


Q ss_pred             --CCCcEEEEcCCCCCCCC---CCH---HHHHHHHHHHHHHHHH----HHhhhCCCeEEEEecC
Q 018512          109 --TGMDLVIIPAGVPRKPG---MTR---DDLFNINAGIVRTLCE----GIAKCCPNATVNLISN  160 (354)
Q Consensus       109 --~~aDvVIi~ag~~~~~g---~~r---~d~~~~n~~~~~~i~~----~i~~~~p~a~viv~tN  160 (354)
                        ...|+||+.||......   .+.   ...+..|+.....+.+    .+++. ..+.||++|.
T Consensus        96 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~-~~g~iv~isS  158 (267)
T 1vl8_A           96 KFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRES-DNPSIINIGS  158 (267)
T ss_dssp             HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTC-SSCEEEEECC
T ss_pred             HcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCcEEEEECC
Confidence              37899999998754221   122   2345566655555544    44433 2456666653

>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*

Probab=97.38  E-value=0.00033  Score=68.48  Aligned_cols=139  Identities=19%  Similarity=0.247  Sum_probs=82.2

Q ss_pred             CCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCc---HHhh-hCCCcEEE
Q 018512           40 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQ---LENA-LTGMDLVI  115 (354)
Q Consensus        40 ~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d---~~~a-l~~aDvVI  115 (354)
                      +..++|+|+|. |.+|+.++..|...++  +++++|.++..  +..+..... ..+.+  +.++   ++++ +.+||+||
T Consensus         2 ~~~~~viIiG~-Gr~G~~va~~L~~~g~--~vvvId~d~~~--v~~~~~~g~-~vi~G--Dat~~~~L~~agi~~A~~vi   73 (413)
T 3l9w_A            2 SHGMRVIIAGF-GRFGQITGRLLLSSGV--KMVVLDHDPDH--IETLRKFGM-KVFYG--DATRMDLLESAGAAKAEVLI   73 (413)
T ss_dssp             --CCSEEEECC-SHHHHHHHHHHHHTTC--CEEEEECCHHH--HHHHHHTTC-CCEES--CTTCHHHHHHTTTTTCSEEE
T ss_pred             CCCCeEEEECC-CHHHHHHHHHHHHCCC--CEEEEECCHHH--HHHHHhCCC-eEEEc--CCCCHHHHHhcCCCccCEEE
Confidence            34578999999 9999999999999888  89999998621  122222221 11221  1222   3333 78999999


Q ss_pred             EcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec-CCCCCchHHHHHHHHHhCCCCCCCEEEeccchHHH
Q 018512          116 IPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS-NPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVR  194 (354)
Q Consensus       116 i~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~t-NPv~~~~~~~~~~~~~~~~~p~~kviG~t~ld~~r  194 (354)
                      ++.+..           .    .-..++..+++.+|+..||+-+ ++...      +.+.+. |  -+.|+--+...+.+
T Consensus        74 v~~~~~-----------~----~n~~i~~~ar~~~p~~~Iiara~~~~~~------~~L~~~-G--ad~Vi~~~~~~a~~  129 (413)
T 3l9w_A           74 NAIDDP-----------Q----TNLQLTEMVKEHFPHLQIIARARDVDHY------IRLRQA-G--VEKPERETFEGALK  129 (413)
T ss_dssp             ECCSSH-----------H----HHHHHHHHHHHHCTTCEEEEEESSHHHH------HHHHHT-T--CSSCEETTHHHHHH
T ss_pred             ECCCCh-----------H----HHHHHHHHHHHhCCCCeEEEEECCHHHH------HHHHHC-C--CCEEECccHHHHHH
Confidence            984311           2    2334566677788987666554 44322      123332 3  24565544444555


Q ss_pred             HHHHHHHHhCCCCCCC
Q 018512          195 ANTFVAEVLGLDPRDV  210 (354)
Q Consensus       195 ~~~~la~~l~v~~~~v  210 (354)
                      +-..+-..+|+++..+
T Consensus       130 la~~~L~~lg~~~~~~  145 (413)
T 3l9w_A          130 TGRLALESLGLGPYEA  145 (413)
T ss_dssp             HHHHHHHHTTCCHHHH
T ss_pred             HHHHHHHHcCCCHHHH
Confidence            5555556667766554

>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*

Probab=97.38  E-value=0.0005  Score=63.05  Aligned_cols=91  Identities=11%  Similarity=0.032  Sum_probs=58.7

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcCCCCC
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVPR  122 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~ag~~~  122 (354)
                      |||+|||+ |.+|..++..|.. ++  +|+++|+++....  .+.....    ...  +  +.++++++|+||++...+ 
T Consensus         2 ~~i~iiG~-G~~G~~~a~~l~~-g~--~V~~~~~~~~~~~--~~~~~g~----~~~--~--~~~~~~~~D~vi~~v~~~-   66 (289)
T 2cvz_A            2 EKVAFIGL-GAMGYPMAGHLAR-RF--PTLVWNRTFEKAL--RHQEEFG----SEA--V--PLERVAEARVIFTCLPTT-   66 (289)
T ss_dssp             CCEEEECC-STTHHHHHHHHHT-TS--CEEEECSSTHHHH--HHHHHHC----CEE--C--CGGGGGGCSEEEECCSSH-
T ss_pred             CeEEEEcc-cHHHHHHHHHHhC-CC--eEEEEeCCHHHHH--HHHHCCC----ccc--C--HHHHHhCCCEEEEeCCCh-
Confidence            68999999 9999999999988 86  8999999762211  1111111    111  1  356788999999985322 


Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecCCC
Q 018512          123 KPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPV  162 (354)
Q Consensus       123 ~~g~~r~d~~~~n~~~~~~i~~~i~~~~-p~a~viv~tNPv  162 (354)
                                    ..+.++++.+.+.. ++.+|+..+|..
T Consensus        67 --------------~~~~~v~~~l~~~l~~~~~vv~~s~~~   93 (289)
T 2cvz_A           67 --------------REVYEVAEALYPYLREGTYWVDATSGE   93 (289)
T ss_dssp             --------------HHHHHHHHHHTTTCCTTEEEEECSCCC
T ss_pred             --------------HHHHHHHHHHHhhCCCCCEEEECCCCC
Confidence                          01233445555444 577777777754

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2

Probab=97.38  E-value=0.0012  Score=60.20  Aligned_cols=115  Identities=14%  Similarity=0.115  Sum_probs=67.8

Q ss_pred             CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc--hhHHHHHhcCCCCCeEEEEe-CCCc---HHhhh------
Q 018512           41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFL-GQPQ---LENAL------  108 (354)
Q Consensus        41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~--~g~~~dl~~~~~~~~v~~~~-~~~d---~~~al------  108 (354)
                      +.+++.|+||+|.+|.+++..|+..|.  +|++.|+++.  .....++....  ..+..+. +-+|   .++++      
T Consensus        20 ~~k~vlVTGas~gIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~   95 (273)
T 1ae1_A           20 KGTTALVTGGSKGIGYAIVEELAGLGA--RVYTCSRNEKELDECLEIWREKG--LNVEGSVCDLLSRTERDKLMQTVAHV   95 (273)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCcchHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcC--CceEEEECCCCCHHHHHHHHHHHHHH
Confidence            346899999999999999999999997  8999999752  22223333221  1222221 1122   22222      


Q ss_pred             --CCCcEEEEcCCCCCCC---CCCH---HHHHHHHHHHHHHHH----HHHhhhCCCeEEEEecC
Q 018512          109 --TGMDLVIIPAGVPRKP---GMTR---DDLFNINAGIVRTLC----EGIAKCCPNATVNLISN  160 (354)
Q Consensus       109 --~~aDvVIi~ag~~~~~---g~~r---~d~~~~n~~~~~~i~----~~i~~~~p~a~viv~tN  160 (354)
                        ...|++|+.||.....   ..+.   ...+..|+.....+.    +.+++.. .+.||++|.
T Consensus        96 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-~g~iv~isS  158 (273)
T 1ae1_A           96 FDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQ-NGNVIFLSS  158 (273)
T ss_dssp             TTSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-SEEEEEECC
T ss_pred             cCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEcC
Confidence              5799999999875321   1222   233445655444444    4444443 466676664

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}

Probab=97.37  E-value=0.00058  Score=62.30  Aligned_cols=116  Identities=12%  Similarity=0.165  Sum_probs=68.8

Q ss_pred             CCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc--hhHHHHHhcCCCCCeEEEEe-CCCc---HHhhhC----
Q 018512           40 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFL-GQPQ---LENALT----  109 (354)
Q Consensus        40 ~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~--~g~~~dl~~~~~~~~v~~~~-~~~d---~~~al~----  109 (354)
                      .+.++|.|+||+|.+|.+++..|+..|.  +|+++|++..  ......+....  ..+..+. +-+|   ++++++    
T Consensus        32 l~~k~vlITGasggIG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~~  107 (279)
T 3ctm_A           32 LKGKVASVTGSSGGIGWAVAEAYAQAGA--DVAIWYNSHPADEKAEHLQKTYG--VHSKAYKCNISDPKSVEETISQQEK  107 (279)
T ss_dssp             CTTCEEEETTTTSSHHHHHHHHHHHHTC--EEEEEESSSCCHHHHHHHHHHHC--SCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcC--CcceEEEeecCCHHHHHHHHHHHHH
Confidence            3446899999999999999999999887  8999998762  22222222111  1122211 1122   233333    


Q ss_pred             ---CCcEEEEcCCCCCC-C----CCC---HHHHHHHHHHH----HHHHHHHHhhhCCCeEEEEecC
Q 018512          110 ---GMDLVIIPAGVPRK-P----GMT---RDDLFNINAGI----VRTLCEGIAKCCPNATVNLISN  160 (354)
Q Consensus       110 ---~aDvVIi~ag~~~~-~----g~~---r~d~~~~n~~~----~~~i~~~i~~~~p~a~viv~tN  160 (354)
                         ..|+||+.||.... .    ..+   ....+..|+..    .+.+.+.+++... +.||++|.
T Consensus       108 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~-~~iv~isS  172 (279)
T 3ctm_A          108 DFGTIDVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYYCSHNIGKIFKKNGK-GSLIITSS  172 (279)
T ss_dssp             HHSCCSEEEECGGGSTTC--CCCSSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC-CEEEEECC
T ss_pred             HhCCCCEEEECCcccccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC-CeEEEECc
Confidence               48999999986432 1    111   12345566665    6677777776543 45555553

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A

Probab=97.37  E-value=0.00089  Score=60.39  Aligned_cols=156  Identities=15%  Similarity=0.144  Sum_probs=84.6

Q ss_pred             CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCC-CCeEEEEeCC--Cc---HHhh-----
Q 018512           41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDT-GAVVRGFLGQ--PQ---LENA-----  107 (354)
Q Consensus        41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~-~~~v~~~~~~--~d---~~~a-----  107 (354)
                      +.+++.|+||+|.+|..++..|+..|.  .|++.|++.  ......++..... ....... +-  .|   .++.     
T Consensus        11 ~~k~vlVTGas~gIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~-D~~~~~~~~~~~~~~~~~   87 (252)
T 3f1l_A           11 NDRIILVTGASDGIGREAAMTYARYGA--TVILLGRNEEKLRQVASHINEETGRQPQWFIL-DLLTCTSENCQQLAQRIA   87 (252)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHHHSCCCEEEEC-CTTTCCHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhhcCCCceEEEE-ecccCCHHHHHHHHHHHH
Confidence            345899999999999999999999998  899999976  2222333322111 1111111 11  12   1222     


Q ss_pred             --hCCCcEEEEcCCCCCC--C--CCCH---HHHHHHHHHHHHHHHHH----HhhhCCCeEEEEecCCCCCchHHHHHHHH
Q 018512          108 --LTGMDLVIIPAGVPRK--P--GMTR---DDLFNINAGIVRTLCEG----IAKCCPNATVNLISNPVNSTVPIAAEVFK  174 (354)
Q Consensus       108 --l~~aDvVIi~ag~~~~--~--g~~r---~d~~~~n~~~~~~i~~~----i~~~~p~a~viv~tNPv~~~~~~~~~~~~  174 (354)
                        +...|++|+.||....  +  ..+.   ...+.-|+.....+.+.    +++. ..+.||++|......         
T Consensus        88 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~-~~g~iv~isS~~~~~---------  157 (252)
T 3f1l_A           88 VNYPRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNATFMLTQALLPLLLKS-DAGSLVFTSSSVGRQ---------  157 (252)
T ss_dssp             HHCSCCSEEEECCCCCCCCSCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTS-SSCEEEEECCGGGTS---------
T ss_pred             HhCCCCCEEEECCccCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHC-CCCEEEEECChhhcc---------
Confidence              2378999999986422  1  1222   23455665555444444    4433 345666665422111         


Q ss_pred             HhCCCCCCCEEEeccchHHHHHHHHHHHhCCCCCCCcceEE
Q 018512          175 KAGTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVV  215 (354)
Q Consensus       175 ~~~~~p~~kviG~t~ld~~r~~~~la~~l~v~~~~v~~~v~  215 (354)
                         +.+..-.++.+......+.+.+|..++  +. |++..+
T Consensus       158 ---~~~~~~~Y~asK~a~~~l~~~la~e~~--~~-irvn~v  192 (252)
T 3f1l_A          158 ---GRANWGAYAASKFATEGMMQVLADEYQ--QR-LRVNCI  192 (252)
T ss_dssp             ---CCTTCHHHHHHHHHHHHHHHHHHHHTT--TT-CEEEEE
T ss_pred             ---CCCCCchhHHHHHHHHHHHHHHHHHhc--CC-cEEEEE
Confidence               222222333333334556777888775  33 554444

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0

Probab=97.37  E-value=0.0011  Score=60.78  Aligned_cols=147  Identities=16%  Similarity=0.146  Sum_probs=81.1

Q ss_pred             CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--------------chhHHHHHhcCCCCCeEEEEe-CCCc--
Q 018512           41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--------------TPGVTADISHMDTGAVVRGFL-GQPQ--  103 (354)
Q Consensus        41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--------------~~g~~~dl~~~~~~~~v~~~~-~~~d--  103 (354)
                      +.+++.|+||+|.+|.+++..|+..|.  +|++.|+++              .......+....  ..+..+. +-+|  
T Consensus         9 ~~k~~lVTGas~gIG~a~a~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~   84 (281)
T 3s55_A            9 EGKTALITGGARGMGRSHAVALAEAGA--DIAICDRCENSDVVGYPLATADDLAETVALVEKTG--RRCISAKVDVKDRA   84 (281)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTT--CCEEEEECCTTCHH
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC--eEEEEeCCccccccccccccHHHHHHHHHHHHhcC--CeEEEEeCCCCCHH
Confidence            345899999999999999999999998  899999862              111112222222  2222221 1122  


Q ss_pred             -HHhhh-------CCCcEEEEcCCCCCCC---CCCH---HHHHHHHHHHHHHHHHH----HhhhCCCeEEEEecCCCCCc
Q 018512          104 -LENAL-------TGMDLVIIPAGVPRKP---GMTR---DDLFNINAGIVRTLCEG----IAKCCPNATVNLISNPVNST  165 (354)
Q Consensus       104 -~~~al-------~~aDvVIi~ag~~~~~---g~~r---~d~~~~n~~~~~~i~~~----i~~~~p~a~viv~tNPv~~~  165 (354)
                       .++++       ...|++|+.||.....   ..+.   ...+..|+.....+.+.    +.+. ..+.||++|..... 
T Consensus        85 ~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-~~g~iv~isS~~~~-  162 (281)
T 3s55_A           85 ALESFVAEAEDTLGGIDIAITNAGISTIALLPEVESAQWDEVIGTNLTGTFNTIAAVAPGMIKR-NYGRIVTVSSMLGH-  162 (281)
T ss_dssp             HHHHHHHHHHHHHTCCCEEEECCCCCCCCCTTCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCGGGG-
T ss_pred             HHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCCEEEEECChhhc-
Confidence             22233       3799999999875321   2222   33455666555554444    4444 35667776542211 


Q ss_pred             hHHHHHHHHHhCCCCCCCEEEeccchHHHHHHHHHHHhC
Q 018512          166 VPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEVLG  204 (354)
Q Consensus       166 ~~~~~~~~~~~~~~p~~kviG~t~ld~~r~~~~la~~l~  204 (354)
                                 .+.+..-.++.+......+.+.+|..++
T Consensus       163 -----------~~~~~~~~Y~asK~a~~~~~~~la~e~~  190 (281)
T 3s55_A          163 -----------SANFAQASYVSSKWGVIGLTKCAAHDLV  190 (281)
T ss_dssp             -----------SCCTTCHHHHHHHHHHHHHHHHHHHHTG
T ss_pred             -----------CCCCCCchhHHHHHHHHHHHHHHHHHHh
Confidence                       1222222333333334456677777653

>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*

Probab=97.37  E-value=0.00039  Score=56.40  Aligned_cols=100  Identities=10%  Similarity=0.062  Sum_probs=59.2

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCc---HHhh-hCCCcEEEEc
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQ---LENA-LTGMDLVIIP  117 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d---~~~a-l~~aDvVIi~  117 (354)
                      +++|+|+|+ |.+|+.++..|...+.  +++++|.++.  ....+....  .... .....+   +.++ +.++|+||++
T Consensus         6 ~~~v~I~G~-G~iG~~~a~~l~~~g~--~v~~~d~~~~--~~~~~~~~~--~~~~-~~d~~~~~~l~~~~~~~~d~vi~~   77 (144)
T 2hmt_A            6 NKQFAVIGL-GRFGGSIVKELHRMGH--EVLAVDINEE--KVNAYASYA--THAV-IANATEENELLSLGIRNFEYVIVA   77 (144)
T ss_dssp             CCSEEEECC-SHHHHHHHHHHHHTTC--CCEEEESCHH--HHHTTTTTC--SEEE-ECCTTCHHHHHTTTGGGCSEEEEC
T ss_pred             CCcEEEECC-CHHHHHHHHHHHHCCC--EEEEEeCCHH--HHHHHHHhC--CEEE-EeCCCCHHHHHhcCCCCCCEEEEC
Confidence            347999999 9999999999998886  7899998642  112222211  1111 111122   2232 6789999998


Q ss_pred             CCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCC
Q 018512          118 AGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVN  163 (354)
Q Consensus       118 ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv~  163 (354)
                      .+.+          ...|..    ++..+++.+++.++...+||..
T Consensus        78 ~~~~----------~~~~~~----~~~~~~~~~~~~ii~~~~~~~~  109 (144)
T 2hmt_A           78 IGAN----------IQASTL----TTLLLKELDIPNIWVKAQNYYH  109 (144)
T ss_dssp             CCSC----------HHHHHH----HHHHHHHTTCSEEEEECCSHHH
T ss_pred             CCCc----------hHHHHH----HHHHHHHcCCCeEEEEeCCHHH
Confidence            7532          122332    3444555677744444556543

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*

Probab=97.37  E-value=0.0011  Score=58.76  Aligned_cols=103  Identities=17%  Similarity=0.173  Sum_probs=60.6

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCCCCeEEEEe-CCCc---HHhhh-------
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQ---LENAL-------  108 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~~~~v~~~~-~~~d---~~~al-------  108 (354)
                      ++++.|+||+|.+|.+++..|+..|.  +|++.|++.  ......++.... ...+..+. +-+|   ..+++       
T Consensus         2 ~k~vlITGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~v~~~~~~~~~~~   78 (235)
T 3l77_A            2 MKVAVITGASRGIGEAIARALARDGY--ALALGARSVDRLEKIAHELMQEQ-GVEVFYHHLDVSKAESVEEFSKKVLERF   78 (235)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHHH-CCCEEEEECCTTCHHHHHHHCC-HHHHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhhc-CCeEEEEEeccCCHHHHHHHHHHHHHhc
Confidence            34799999999999999999999997  899999976  222333332111 11222211 1122   22333       


Q ss_pred             CCCcEEEEcCCCCCCCC---CCH---HHHHHHHHHHHHHHHHHHh
Q 018512          109 TGMDLVIIPAGVPRKPG---MTR---DDLFNINAGIVRTLCEGIA  147 (354)
Q Consensus       109 ~~aDvVIi~ag~~~~~g---~~r---~d~~~~n~~~~~~i~~~i~  147 (354)
                      ...|++|+.||......   .+.   ...+..|+.....+.+.+.
T Consensus        79 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~  123 (235)
T 3l77_A           79 GDVDVVVANAGLGYFKRLEELSEEEFHEMIEVNLLGVWRTLKAFL  123 (235)
T ss_dssp             SSCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred             CCCCEEEECCccccccCcccCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence            37899999998753221   222   2345556555544444443

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*

Probab=97.37  E-value=7.9e-05  Score=66.84  Aligned_cols=111  Identities=13%  Similarity=0.072  Sum_probs=66.0

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhh---------CCCc
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENAL---------TGMD  112 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al---------~~aD  112 (354)
                      .++|.|+||+|.+|..++..|+..|.  +|++.|++..... ... +. ...++.   ...+.++++         .+.|
T Consensus         7 ~k~vlVTGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~-~~~-~~-~~~D~~---~~~~v~~~~~~~~~~~~~g~iD   78 (241)
T 1dhr_A            7 ARRVLVYGGRGALGSRCVQAFRARNW--WVASIDVVENEEA-SAS-VI-VKMTDS---FTEQADQVTAEVGKLLGDQKVD   78 (241)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHTTTC--EEEEEESSCCTTS-SEE-EE-CCCCSC---HHHHHHHHHHHHHHHHTTCCEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCC--EEEEEeCChhhcc-CCc-EE-EEcCCC---CHHHHHHHHHHHHHHhCCCCCC
Confidence            35899999999999999999999987  8999999762110 000 00 000110   001122222         3799


Q ss_pred             EEEEcCCCCCCC----CCC---HHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecC
Q 018512          113 LVIIPAGVPRKP----GMT---RDDLFNINAGIVRTLCEGIAKCC-PNATVNLISN  160 (354)
Q Consensus       113 vVIi~ag~~~~~----g~~---r~d~~~~n~~~~~~i~~~i~~~~-p~a~viv~tN  160 (354)
                      ++|+.||.....    ..+   ....+..|+.....+.+.+.+.- ..+.|+++|.
T Consensus        79 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~iv~isS  134 (241)
T 1dhr_A           79 AILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGA  134 (241)
T ss_dssp             EEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECC
T ss_pred             EEEEcccccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCEEEEECC
Confidence            999999864321    111   23345667766666666665443 2467777764

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*

Probab=97.37  E-value=0.0014  Score=58.85  Aligned_cols=154  Identities=17%  Similarity=0.181  Sum_probs=85.9

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC---chhHHHHHhcCCCCCeEEEEe-CCCc---HHhhh-------
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN---TPGVTADISHMDTGAVVRGFL-GQPQ---LENAL-------  108 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~---~~g~~~dl~~~~~~~~v~~~~-~~~d---~~~al-------  108 (354)
                      +++.|+||+|.+|.+++..|+..|.  +|++.|.+.   .+....++....  ..+..+. +-+|   .++++       
T Consensus         5 k~~lVTGas~gIG~~ia~~l~~~G~--~V~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~~~   80 (246)
T 3osu_A            5 KSALVTGASRGIGRSIALQLAEEGY--NVAVNYAGSKEKAEAVVEEIKAKG--VDSFAIQANVADADEVKAMIKEVVSQF   80 (246)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTC--EEEEEESSCHHHHHHHHHHHHHTT--SCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCC--EEEEEeCCCHHHHHHHHHHHHhcC--CcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            4789999999999999999999998  888988865   222333343322  2222211 1122   22333       


Q ss_pred             CCCcEEEEcCCCCCCC---CCCH---HHHHHHHHHHHHHHHHHH----hhhCCCeEEEEecCCCCCchHHHHHHHHHhCC
Q 018512          109 TGMDLVIIPAGVPRKP---GMTR---DDLFNINAGIVRTLCEGI----AKCCPNATVNLISNPVNSTVPIAAEVFKKAGT  178 (354)
Q Consensus       109 ~~aDvVIi~ag~~~~~---g~~r---~d~~~~n~~~~~~i~~~i----~~~~p~a~viv~tNPv~~~~~~~~~~~~~~~~  178 (354)
                      ...|++|+.||.....   ..+.   ...+.-|+.....+.+.+    .+. ..+.||++|.-.           -. .+
T Consensus        81 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~-~~g~iv~isS~~-----------~~-~~  147 (246)
T 3osu_A           81 GSLDVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQ-RSGAIINLSSVV-----------GA-VG  147 (246)
T ss_dssp             SCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCHH-----------HH-HC
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCCEEEEEcchh-----------hc-CC
Confidence            3789999999875321   1222   234566765555444444    544 345666665311           01 13


Q ss_pred             CCCCCEEEeccchHHHHHHHHHHHhCCCCCCCcceEE
Q 018512          179 YDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVV  215 (354)
Q Consensus       179 ~p~~kviG~t~ld~~r~~~~la~~l~v~~~~v~~~v~  215 (354)
                      .|..-.++.+......+.+.+|..++  +..|++..+
T Consensus       148 ~~~~~~Y~~sK~a~~~~~~~la~e~~--~~gi~vn~v  182 (246)
T 3osu_A          148 NPGQANYVATKAGVIGLTKSAARELA--SRGITVNAV  182 (246)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHHG--GGTEEEEEE
T ss_pred             CCCChHHHHHHHHHHHHHHHHHHHhc--ccCeEEEEE
Confidence            34333444444444556777777664  334444433

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*

Probab=97.37  E-value=0.00064  Score=61.36  Aligned_cols=113  Identities=5%  Similarity=-0.041  Sum_probs=66.1

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCch-hHHHHHhcCCCCCeEEEEeCCCcHHhhh-------CCCcEE
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP-GVTADISHMDTGAVVRGFLGQPQLENAL-------TGMDLV  114 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~-g~~~dl~~~~~~~~v~~~~~~~d~~~al-------~~aDvV  114 (354)
                      +++.|+||+|.+|..++..|+..|.  +|++.|++... ....++....  ..+..+ ...+.++++       ...|++
T Consensus         2 k~vlVTGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~l~~~~--~~~~~~-d~~~v~~~~~~~~~~~g~iD~l   76 (254)
T 1zmt_A            2 STAIVTNVKHFGGMGSALRLSEAGH--TVACHDESFKQKDELEAFAETY--PQLKPM-SEQEPAELIEAVTSAYGQVDVL   76 (254)
T ss_dssp             CEEEESSTTSTTHHHHHHHHHHTTC--EEEECCGGGGSHHHHHHHHHHC--TTSEEC-CCCSHHHHHHHHHHHHSCCCEE
T ss_pred             eEEEEeCCCchHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHhcC--CcEEEE-CHHHHHHHHHHHHHHhCCCCEE
Confidence            3689999999999999999999998  89999987621 1122232211  111111 223333333       478999


Q ss_pred             EEcCCCC-CCC---CCCH---HHHHHHHHHHH----HHHHHHHhhhCCCeEEEEecCC
Q 018512          115 IIPAGVP-RKP---GMTR---DDLFNINAGIV----RTLCEGIAKCCPNATVNLISNP  161 (354)
Q Consensus       115 Ii~ag~~-~~~---g~~r---~d~~~~n~~~~----~~i~~~i~~~~p~a~viv~tNP  161 (354)
                      |+.||.. ...   ..+.   ...+..|+...    +.+.+.+++.. .+.||++|.-
T Consensus        77 v~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~  133 (254)
T 1zmt_A           77 VSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRK-SGHIIFITSA  133 (254)
T ss_dssp             EEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCS
T ss_pred             EECCCcCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEECCc
Confidence            9999875 221   1122   23445565544    44444554443 4566666543

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*

Probab=97.36  E-value=0.0005  Score=62.44  Aligned_cols=155  Identities=16%  Similarity=0.167  Sum_probs=83.5

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEE-ecCC--chhHHHHHhcCCCCCeEEEEe-CCCc---HHhhh------
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLY-DVVN--TPGVTADISHMDTGAVVRGFL-GQPQ---LENAL------  108 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~-D~~~--~~g~~~dl~~~~~~~~v~~~~-~~~d---~~~al------  108 (354)
                      .+++.|+||+|.+|.+++..|+..|.  +|++. +++.  ......++....  ..+..+. +-+|   .++++      
T Consensus         4 ~k~vlVTGas~gIG~aia~~l~~~G~--~vv~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~~   79 (258)
T 3oid_A            4 NKCALVTGSSRGVGKAAAIRLAENGY--NIVINYARSKKAALETAEEIEKLG--VKVLVVKANVGQPAKIKEMFQQIDET   79 (258)
T ss_dssp             CCEEEESSCSSHHHHHHHHHHHHTTC--EEEEEESSCHHHHHHHHHHHHTTT--CCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCEEEEecCCchHHHHHHHHHHHCCC--EEEEEcCCCHHHHHHHHHHHHhcC--CcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            35799999999999999999999998  88886 6654  222334444332  2232221 1122   22233      


Q ss_pred             -CCCcEEEEcCCCCCCCC---CCH---HHHHHHHHHHHHHHHHH----HhhhCCCeEEEEecCCCCCchHHHHHHHHHhC
Q 018512          109 -TGMDLVIIPAGVPRKPG---MTR---DDLFNINAGIVRTLCEG----IAKCCPNATVNLISNPVNSTVPIAAEVFKKAG  177 (354)
Q Consensus       109 -~~aDvVIi~ag~~~~~g---~~r---~d~~~~n~~~~~~i~~~----i~~~~p~a~viv~tNPv~~~~~~~~~~~~~~~  177 (354)
                       ...|++|+.||......   .+.   ...+.-|+.....+.+.    +++. ..+.||++|.-...            .
T Consensus        80 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~-~~g~iv~isS~~~~------------~  146 (258)
T 3oid_A           80 FGRLDVFVNNAASGVLRPVMELEETHWDWTMNINAKALLFCAQEAAKLMEKN-GGGHIVSISSLGSI------------R  146 (258)
T ss_dssp             HSCCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTT-TCEEEEEEEEGGGT------------S
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCcEEEEECchhhC------------C
Confidence             35699999998643221   222   23455666555444444    4433 35666666532111            1


Q ss_pred             CCCCCCEEEeccchHHHHHHHHHHHhCCCCCCCcceEE
Q 018512          178 TYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVV  215 (354)
Q Consensus       178 ~~p~~kviG~t~ld~~r~~~~la~~l~v~~~~v~~~v~  215 (354)
                      +.+..-.++.+......+.+.+|..++  +..|++..+
T Consensus       147 ~~~~~~~Y~asKaa~~~l~~~la~e~~--~~gi~vn~v  182 (258)
T 3oid_A          147 YLENYTTVGVSKAALEALTRYLAVELS--PKQIIVNAV  182 (258)
T ss_dssp             BCTTCHHHHHHHHHHHHHHHHHHHHTG--GGTEEEEEE
T ss_pred             CCCCcHHHHHHHHHHHHHHHHHHHHHh--hcCcEEEEE
Confidence            222222333343334556777777764  334443333

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}

Probab=97.36  E-value=0.00071  Score=62.15  Aligned_cols=144  Identities=13%  Similarity=0.124  Sum_probs=79.4

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc--hhHHHHHhcCCCCCeEEEE-eCCCc---HHhhh-------
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGF-LGQPQ---LENAL-------  108 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~--~g~~~dl~~~~~~~~v~~~-~~~~d---~~~al-------  108 (354)
                      .+++.|+||+|.+|.+++..|+..|.  .|++.|++..  .....++.     ..+..+ .+-+|   .++++       
T Consensus        27 ~k~vlVTGas~GIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~-----~~~~~~~~Dv~d~~~v~~~~~~~~~~~   99 (277)
T 4dqx_A           27 QRVCIVTGGGSGIGRATAELFAKNGA--YVVVADVNEDAAVRVANEIG-----SKAFGVRVDVSSAKDAESMVEKTTAKW   99 (277)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESSHHHHHHHHHHHC-----TTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHhC-----CceEEEEecCCCHHHHHHHHHHHHHHc
Confidence            35899999999999999999999998  8999998752  22222221     111111 11122   22223       


Q ss_pred             CCCcEEEEcCCCCCCC---CCC---HHHHHHHHHHHHHHHHHHHhhh---CCCeEEEEecCCCCCchHHHHHHHHHhCCC
Q 018512          109 TGMDLVIIPAGVPRKP---GMT---RDDLFNINAGIVRTLCEGIAKC---CPNATVNLISNPVNSTVPIAAEVFKKAGTY  179 (354)
Q Consensus       109 ~~aDvVIi~ag~~~~~---g~~---r~d~~~~n~~~~~~i~~~i~~~---~p~a~viv~tNPv~~~~~~~~~~~~~~~~~  179 (354)
                      ...|++|+.||.....   ..+   ....+.-|+.....+.+.+..+   ...+.||++|.....            .+.
T Consensus       100 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~------------~~~  167 (277)
T 4dqx_A          100 GRVDVLVNNAGFGTTGNVVTIPEETWDRIMSVNVKGIFLCSKYVIPVMRRNGGGSIINTTSYTAT------------SAI  167 (277)
T ss_dssp             SCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECCGGGT------------SCC
T ss_pred             CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECchhhC------------cCC
Confidence            3789999999865321   122   2334556765554444444322   234667776542211            122


Q ss_pred             CCCCEEEeccchHHHHHHHHHHHhC
Q 018512          180 DPKKLLGVTMLDVVRANTFVAEVLG  204 (354)
Q Consensus       180 p~~kviG~t~ld~~r~~~~la~~l~  204 (354)
                      +..-.++.+......+.+.+|..++
T Consensus       168 ~~~~~Y~asKaa~~~l~~~la~e~~  192 (277)
T 4dqx_A          168 ADRTAYVASKGAISSLTRAMAMDHA  192 (277)
T ss_dssp             TTBHHHHHHHHHHHHHHHHHHHHHG
T ss_pred             CCChhHHHHHHHHHHHHHHHHHHhh
Confidence            3222333333334456677777764

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0

Probab=97.36  E-value=0.001  Score=60.83  Aligned_cols=148  Identities=19%  Similarity=0.186  Sum_probs=84.0

Q ss_pred             CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecC-------------C--chhHHHHHhcCCCCCeEEEE-eCCCcH
Q 018512           41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVV-------------N--TPGVTADISHMDTGAVVRGF-LGQPQL  104 (354)
Q Consensus        41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~-------------~--~~g~~~dl~~~~~~~~v~~~-~~~~d~  104 (354)
                      +.+++.|+||+|.+|.+++..|+..|.  +|+++|++             .  ......++....  ..+..+ .+-+|.
T Consensus        10 ~~k~~lVTGas~GIG~a~a~~la~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~   85 (277)
T 3tsc_A           10 EGRVAFITGAARGQGRAHAVRMAAEGA--DIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAAN--RRIVAAVVDTRDF   85 (277)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC--EEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTT--CCEEEEECCTTCH
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHcCC--EEEEEeccccccccccccccCHHHHHHHHHHHHhcC--CeEEEEECCCCCH
Confidence            345899999999999999999999998  89999983             1  111222233222  222222 111222


Q ss_pred             ---Hhh-------hCCCcEEEEcCCCCCCCC---CCH---HHHHHHHHH----HHHHHHHHHhhhCCCeEEEEecCCCCC
Q 018512          105 ---ENA-------LTGMDLVIIPAGVPRKPG---MTR---DDLFNINAG----IVRTLCEGIAKCCPNATVNLISNPVNS  164 (354)
Q Consensus       105 ---~~a-------l~~aDvVIi~ag~~~~~g---~~r---~d~~~~n~~----~~~~i~~~i~~~~p~a~viv~tNPv~~  164 (354)
                         ++.       +...|++|+.||......   .+.   ...+.-|+.    .++.+.+.+.+....+.||++|.-...
T Consensus        86 ~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~  165 (277)
T 3tsc_A           86 DRLRKVVDDGVAALGRLDIIVANAGVAAPQAWDDITPEDFRDVMDINVTGTWNTVMAGAPRIIEGGRGGSIILISSAAGM  165 (277)
T ss_dssp             HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGT
T ss_pred             HHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCEEEEEccHhhC
Confidence               222       346899999998754321   222   233455644    455556667766656777777643211


Q ss_pred             chHHHHHHHHHhCCCCCCCEEEeccchHHHHHHHHHHHhC
Q 018512          165 TVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEVLG  204 (354)
Q Consensus       165 ~~~~~~~~~~~~~~~p~~kviG~t~ld~~r~~~~la~~l~  204 (354)
                      .            +.|..-.++.+......+.+.+|..++
T Consensus       166 ~------------~~~~~~~Y~asKaa~~~~~~~la~e~~  193 (277)
T 3tsc_A          166 K------------MQPFMIHYTASKHAVTGLARAFAAELG  193 (277)
T ss_dssp             S------------CCSSCHHHHHHHHHHHHHHHHHHHHHG
T ss_pred             C------------CCCCchhhHHHHHHHHHHHHHHHHHhC
Confidence            1            222222233333334456677777764

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*

Probab=97.35  E-value=0.0033  Score=56.17  Aligned_cols=112  Identities=16%  Similarity=0.235  Sum_probs=67.2

Q ss_pred             CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc--hhHHHHHhcCCCCCeE-EEEe-CCCc---HHhhh-----
Q 018512           41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVV-RGFL-GQPQ---LENAL-----  108 (354)
Q Consensus        41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~--~g~~~dl~~~~~~~~v-~~~~-~~~d---~~~al-----  108 (354)
                      +.++|.|+||+|.+|..++..|+..|.  +|+++|++..  .....++.     ..+ ..+. +-+|   +++++     
T Consensus        10 ~~k~vlITGasggiG~~la~~l~~~G~--~V~~~~r~~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~   82 (254)
T 2wsb_A           10 DGACAAVTGAGSGIGLEICRAFAASGA--RLILIDREAAALDRAAQELG-----AAVAARIVADVTDAEAMTAAAAEAEA   82 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHG-----GGEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHhc-----ccceeEEEEecCCHHHHHHHHHHHHh
Confidence            345899999999999999999999987  8999998752  22222221     111 1111 1122   22222     


Q ss_pred             -CCCcEEEEcCCCCCCC---CCC---HHHHHHHHHHH----HHHHHHHHhhhCCCeEEEEecC
Q 018512          109 -TGMDLVIIPAGVPRKP---GMT---RDDLFNINAGI----VRTLCEGIAKCCPNATVNLISN  160 (354)
Q Consensus       109 -~~aDvVIi~ag~~~~~---g~~---r~d~~~~n~~~----~~~i~~~i~~~~p~a~viv~tN  160 (354)
                       .+.|+||++||.....   ..+   ..+.+..|+..    .+.+.+.+++.. .+.|+++|.
T Consensus        83 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~~~iv~isS  144 (254)
T 2wsb_A           83 VAPVSILVNSAGIARLHDALETDDATWRQVMAVNVDGMFWASRAFGRAMVARG-AGAIVNLGS  144 (254)
T ss_dssp             HSCCCEEEECCCCCCCBCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECC
T ss_pred             hCCCcEEEECCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEEec
Confidence             5789999999865321   112   23345567665    445555555443 456666654

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0

Probab=97.35  E-value=0.00034  Score=62.63  Aligned_cols=111  Identities=13%  Similarity=0.100  Sum_probs=65.4

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCCCCeEEEEe-CCCc---HHhhh-------C
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQ---LENAL-------T  109 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~~~~v~~~~-~~~d---~~~al-------~  109 (354)
                      +++.|+||+|.+|..++..|+..|.  +|++.|++.  .+....++..     .+..+. +-+|   .++++       .
T Consensus         4 k~vlVTGas~GIG~a~a~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~-----~~~~~~~D~~~~~~v~~~~~~~~~~~g   76 (235)
T 3l6e_A            4 GHIIVTGAGSGLGRALTIGLVERGH--QVSMMGRRYQRLQQQELLLGN-----AVIGIVADLAHHEDVDVAFAAAVEWGG   76 (235)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHGG-----GEEEEECCTTSHHHHHHHHHHHHHHHC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHhcC-----CceEEECCCCCHHHHHHHHHHHHHhcC
Confidence            5799999999999999999999998  899999976  2222233321     122211 1122   22222       3


Q ss_pred             CCcEEEEcCCCCCCC---CCC---HHHHHHHHHHHHHHHHHHHhhhC--CCeEEEEecC
Q 018512          110 GMDLVIIPAGVPRKP---GMT---RDDLFNINAGIVRTLCEGIAKCC--PNATVNLISN  160 (354)
Q Consensus       110 ~aDvVIi~ag~~~~~---g~~---r~d~~~~n~~~~~~i~~~i~~~~--p~a~viv~tN  160 (354)
                      ..|++|+.||.....   ..+   ....+.-|+.....+.+.+...-  ..+.|+++|.
T Consensus        77 ~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~iv~isS  135 (235)
T 3l6e_A           77 LPELVLHCAGTGEFGPVGVYTAEQIRRVMESNLVSTILVAQQTVRLIGERGGVLANVLS  135 (235)
T ss_dssp             SCSEEEEECCCC------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEECC
T ss_pred             CCcEEEECCCCCCCCChHhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEEeC
Confidence            679999999874321   122   23345667766655555543321  2346666654

>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}

Probab=97.35  E-value=0.00042  Score=64.77  Aligned_cols=108  Identities=13%  Similarity=0.096  Sum_probs=62.3

Q ss_pred             cchhhhhhhhcccCCCCCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCc
Q 018512           24 QENSCLRQAKCRAKGGAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQ  103 (354)
Q Consensus        24 ~~~~~~~~~~~~~~~~~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d  103 (354)
                      .++..|.......   ...|||+|||+ |.+|+.++..|...++  +|.++|+++....  .+....    +..   ..+
T Consensus        15 ~~~~~~~~~~~~~---~~~~~I~iIG~-G~mG~~~a~~l~~~g~--~V~~~~~~~~~~~--~~~~~g----~~~---~~~   79 (316)
T 2uyy_A           15 TENLYFQSMGSIT---PTDKKIGFLGL-GLMGSGIVSNLLKMGH--TVTVWNRTAEKCD--LFIQEG----ARL---GRT   79 (316)
T ss_dssp             ----------CCC---CCSSCEEEECC-SHHHHHHHHHHHHTTC--CEEEECSSGGGGH--HHHHTT----CEE---CSC
T ss_pred             ccceeecCCCCCC---CCCCeEEEEcc-cHHHHHHHHHHHhCCC--EEEEEeCCHHHHH--HHHHcC----CEE---cCC
Confidence            4555555332221   23479999999 9999999999998887  8999999762211  122211    121   235


Q ss_pred             HHhhhCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHH----hhhCCCeEEEEecCC
Q 018512          104 LENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGI----AKCCPNATVNLISNP  161 (354)
Q Consensus       104 ~~~al~~aDvVIi~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i----~~~~p~a~viv~tNP  161 (354)
                      .+++++++|+||++...+               ..+++++..+    ....++.+|+..+|-
T Consensus        80 ~~~~~~~~DvVi~av~~~---------------~~~~~v~~~~~~~~~~l~~~~~vv~~s~~  126 (316)
T 2uyy_A           80 PAEVVSTCDITFACVSDP---------------KAAKDLVLGPSGVLQGIRPGKCYVDMSTV  126 (316)
T ss_dssp             HHHHHHHCSEEEECCSSH---------------HHHHHHHHSTTCGGGGCCTTCEEEECSCC
T ss_pred             HHHHHhcCCEEEEeCCCH---------------HHHHHHHcCchhHhhcCCCCCEEEECCCC
Confidence            678889999999985311               1223333332    223467777777773

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}

Probab=97.35  E-value=0.0005  Score=62.59  Aligned_cols=153  Identities=10%  Similarity=-0.004  Sum_probs=84.0

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCc---HHhh-------hCCC
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQ---LENA-------LTGM  111 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d---~~~a-------l~~a  111 (354)
                      .++|.|+||+|.+|.+++..|+..|.  +|++.|++.... ...+..... ..+.  .+-+|   .+++       +...
T Consensus        27 ~k~vlVTGas~gIG~aia~~l~~~G~--~V~~~~r~~~~~-~~~~~~~~~-~~~~--~Dv~~~~~v~~~~~~~~~~~g~i  100 (260)
T 3gem_A           27 SAPILITGASQRVGLHCALRLLEHGH--RVIISYRTEHAS-VTELRQAGA-VALY--GDFSCETGIMAFIDLLKTQTSSL  100 (260)
T ss_dssp             CCCEEESSTTSHHHHHHHHHHHHTTC--CEEEEESSCCHH-HHHHHHHTC-EEEE--CCTTSHHHHHHHHHHHHHHCSCC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCC--EEEEEeCChHHH-HHHHHhcCC-eEEE--CCCCCHHHHHHHHHHHHHhcCCC
Confidence            45799999999999999999999997  899999986321 122222111 0011  11112   2222       2478


Q ss_pred             cEEEEcCCCCCCCC--CCH---HHHHHHHHHHHHHHHHHHhhh---CCCeEEEEecCCCCCchHHHHHHHHHhCCCCCCC
Q 018512          112 DLVIIPAGVPRKPG--MTR---DDLFNINAGIVRTLCEGIAKC---CPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKK  183 (354)
Q Consensus       112 DvVIi~ag~~~~~g--~~r---~d~~~~n~~~~~~i~~~i~~~---~p~a~viv~tNPv~~~~~~~~~~~~~~~~~p~~k  183 (354)
                      |++|+.||......  .+.   ...+..|+.....+.+.+..+   ...+.||++|.....            .+.|..-
T Consensus       101 D~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~------------~~~~~~~  168 (260)
T 3gem_A          101 RAVVHNASEWLAETPGEEADNFTRMFSVHMLAPYLINLHCEPLLTASEVADIVHISDDVTR------------KGSSKHI  168 (260)
T ss_dssp             SEEEECCCCCCCCCTTCHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGG------------TCCSSCH
T ss_pred             CEEEECCCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhc------------CCCCCcH
Confidence            99999998653322  222   234556655554544444332   234666766532211            1233323


Q ss_pred             EEEeccchHHHHHHHHHHHhCCCCCCCcceEE
Q 018512          184 LLGVTMLDVVRANTFVAEVLGLDPRDVDVPVV  215 (354)
Q Consensus       184 viG~t~ld~~r~~~~la~~l~v~~~~v~~~v~  215 (354)
                      .++.+......+.+.+|..++-   .|++..+
T Consensus       169 ~Y~asKaa~~~l~~~la~e~~~---~Irvn~v  197 (260)
T 3gem_A          169 AYCATKAGLESLTLSFAARFAP---LVKVNGI  197 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTT---TCEEEEE
T ss_pred             hHHHHHHHHHHHHHHHHHHHCC---CCEEEEE
Confidence            3444443445567778887752   2554444

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*

Probab=97.34  E-value=0.0023  Score=57.43  Aligned_cols=113  Identities=19%  Similarity=0.256  Sum_probs=68.3

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC-chhHHHHHhcCCCCCeEEEEe-CCCc---HHhh-------hC
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN-TPGVTADISHMDTGAVVRGFL-GQPQ---LENA-------LT  109 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~-~~g~~~dl~~~~~~~~v~~~~-~~~d---~~~a-------l~  109 (354)
                      .++|.|+||+|.+|..++..|+..|.  +|++.|++. .... ..+....  ..+..+. +-+|   .+++       +.
T Consensus         7 ~k~vlVTGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~-~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   81 (249)
T 2ew8_A            7 DKLAVITGGANGIGRAIAERFAVEGA--DIAIADLVPAPEAE-AAIRNLG--RRVLTVKCDVSQPGDVEAFGKQVISTFG   81 (249)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESSCCHHHH-HHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEcCCchhHHH-HHHHhcC--CcEEEEEeecCCHHHHHHHHHHHHHHcC
Confidence            45899999999999999999999997  899999976 3221 1333222  1222221 1122   2222       34


Q ss_pred             CCcEEEEcCCCCCCC---CCC---HHHHHHHHHHH----HHHHHHHHhhhCCCeEEEEecC
Q 018512          110 GMDLVIIPAGVPRKP---GMT---RDDLFNINAGI----VRTLCEGIAKCCPNATVNLISN  160 (354)
Q Consensus       110 ~aDvVIi~ag~~~~~---g~~---r~d~~~~n~~~----~~~i~~~i~~~~p~a~viv~tN  160 (354)
                      ..|+||+.||.....   ..+   ....+..|+..    .+.+.+.+++.. .+.||++|.
T Consensus        82 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS  141 (249)
T 2ew8_A           82 RCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNG-WGRIINLTS  141 (249)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECC
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CeEEEEEcc
Confidence            789999999865321   122   22345566655    445555566543 456666654

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A

Probab=97.33  E-value=0.00059  Score=61.82  Aligned_cols=152  Identities=16%  Similarity=0.204  Sum_probs=89.0

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc--hhHHHHHhcCCCCCeEEEEe-CCCcH---H-------hhh
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFL-GQPQL---E-------NAL  108 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~--~g~~~dl~~~~~~~~v~~~~-~~~d~---~-------~al  108 (354)
                      .+++.|+||+|.+|.+++..|+..|.  +|++.|+++.  .....++.     ..+..+. +-+|.   +       +.+
T Consensus         8 gk~~lVTGas~gIG~a~a~~l~~~G~--~V~~~~r~~~~~~~~~~~~~-----~~~~~~~~Dv~~~~~v~~~~~~~~~~~   80 (255)
T 4eso_A            8 GKKAIVIGGTHGMGLATVRRLVEGGA--EVLLTGRNESNIARIREEFG-----PRVHALRSDIADLNEIAVLGAAAGQTL   80 (255)
T ss_dssp             TCEEEEETCSSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHG-----GGEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHhC-----CcceEEEccCCCHHHHHHHHHHHHHHh
Confidence            45899999999999999999999998  8999999762  22222221     1122211 11222   1       223


Q ss_pred             CCCcEEEEcCCCCCCCC---CC---HHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecCCCCCchHHHHHHHHHhCCCCC
Q 018512          109 TGMDLVIIPAGVPRKPG---MT---RDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNSTVPIAAEVFKKAGTYDP  181 (354)
Q Consensus       109 ~~aDvVIi~ag~~~~~g---~~---r~d~~~~n~~~~~~i~~~i~~~~-p~a~viv~tNPv~~~~~~~~~~~~~~~~~p~  181 (354)
                      ...|++|+.||......   .+   ....+.-|+.....+.+.+..+- ..+.|+++|......            +.|.
T Consensus        81 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~------------~~~~  148 (255)
T 4eso_A           81 GAIDLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFTSSVADEG------------GHPG  148 (255)
T ss_dssp             SSEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCGGGSS------------BCTT
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEECChhhcC------------CCCC
Confidence            47899999998764221   12   23456778877777777776553 356777776432211            2232


Q ss_pred             CCEEEeccchHHHHHHHHHHHhCCCCCCCcceE
Q 018512          182 KKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPV  214 (354)
Q Consensus       182 ~kviG~t~ld~~r~~~~la~~l~v~~~~v~~~v  214 (354)
                      .-.++.+......+.+.++..++  +..|++..
T Consensus       149 ~~~Y~asKaa~~~~~~~la~e~~--~~gi~vn~  179 (255)
T 4eso_A          149 MSVYSASKAALVSFASVLAAELL--PRGIRVNS  179 (255)
T ss_dssp             BHHHHHHHHHHHHHHHHHHHHTG--GGTCEEEE
T ss_pred             chHHHHHHHHHHHHHHHHHHHHh--hhCcEEEE
Confidence            22333333334456677777763  33454433

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=97.33  E-value=0.00035  Score=62.19  Aligned_cols=100  Identities=18%  Similarity=0.172  Sum_probs=59.5

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCC--CCcEEEEEecCCchhHHHHHhcCCCCCeEEEEe-CCCc---HHhhhC------
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINP--LVSVLHLYDVVNTPGVTADISHMDTGAVVRGFL-GQPQ---LENALT------  109 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~--~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~-~~~d---~~~al~------  109 (354)
                      .++|.|+||+|.+|.+++..|+..|  .  +|+++|++.....  ++.+.. ...+..+. +-++   +.++++      
T Consensus         3 ~k~vlItGasggiG~~la~~l~~~g~~~--~V~~~~r~~~~~~--~l~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~   77 (250)
T 1yo6_A            3 PGSVVVTGANRGIGLGLVQQLVKDKNIR--HIIATARDVEKAT--ELKSIK-DSRVHVLPLTVTCDKSLDTFVSKVGEIV   77 (250)
T ss_dssp             CSEEEESSCSSHHHHHHHHHHHTCTTCC--EEEEEESSGGGCH--HHHTCC-CTTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCEEEEecCCchHHHHHHHHHHhcCCCc--EEEEEecCHHHHH--HHHhcc-CCceEEEEeecCCHHHHHHHHHHHHHhc
Confidence            4589999999999999999999988  6  8999999762211  122221 12233221 1122   233343      


Q ss_pred             ---CCcEEEEcCCCCC-CC---CCC---HHHHHHHHHHHHHHHHHHH
Q 018512          110 ---GMDLVIIPAGVPR-KP---GMT---RDDLFNINAGIVRTLCEGI  146 (354)
Q Consensus       110 ---~aDvVIi~ag~~~-~~---g~~---r~d~~~~n~~~~~~i~~~i  146 (354)
                         +.|+||++||... ..   ..+   ....+..|+.....+.+.+
T Consensus        78 g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~  124 (250)
T 1yo6_A           78 GSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKL  124 (250)
T ss_dssp             GGGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHT
T ss_pred             CCCCCcEEEECCcccCCCcccccCCHHHHHHHHHHhhHHHHHHHHHH
Confidence               8999999998654 11   122   2234555655544444443

>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A

Probab=97.33  E-value=0.0015  Score=65.09  Aligned_cols=99  Identities=17%  Similarity=0.190  Sum_probs=63.6

Q ss_pred             CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCC-CCCeEEEEeCCCcHHhhhC---CCcEEEE
Q 018512           41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMD-TGAVVRGFLGQPQLENALT---GMDLVII  116 (354)
Q Consensus        41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~-~~~~v~~~~~~~d~~~al~---~aDvVIi  116 (354)
                      .+|||+|||. |.+|.+++..|+..|+  +|+++|+++...  .++.... ....+..   +.+++++++   ++|+||+
T Consensus         3 ~~~kIgiIGl-G~MG~~lA~~L~~~G~--~V~v~dr~~~~~--~~l~~~g~~g~~i~~---~~s~~e~v~~l~~aDvVil   74 (484)
T 4gwg_A            3 AQADIALIGL-AVMGQNLILNMNDHGF--VVCAFNRTVSKV--DDFLANEAKGTKVVG---AQSLKEMVSKLKKPRRIIL   74 (484)
T ss_dssp             CCBSEEEECC-SHHHHHHHHHHHHTTC--CEEEECSSTHHH--HHHHHTTTTTSSCEE---CSSHHHHHHTBCSSCEEEE
T ss_pred             CCCEEEEECh-hHHHHHHHHHHHHCCC--EEEEEeCCHHHH--HHHHhcccCCCceec---cCCHHHHHhhccCCCEEEE
Confidence            4579999999 9999999999999998  899999987321  2222211 1112322   235556554   6999999


Q ss_pred             cCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecCCC
Q 018512          117 PAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPV  162 (354)
Q Consensus       117 ~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~-p~a~viv~tNPv  162 (354)
                      +...+               +.+.++++.+..+- |+.+||..||-.
T Consensus        75 ~Vp~~---------------~~v~~vl~~l~~~L~~g~iIId~st~~  106 (484)
T 4gwg_A           75 LVKAG---------------QAVDDFIEKLVPLLDTGDIIIDGGNSE  106 (484)
T ss_dssp             CSCSS---------------HHHHHHHHHHGGGCCTTCEEEECSCCC
T ss_pred             ecCCh---------------HHHHHHHHHHHHhcCCCCEEEEcCCCC
Confidence            85322               12334445555554 677777777654

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2

Probab=97.33  E-value=0.00037  Score=63.16  Aligned_cols=160  Identities=14%  Similarity=0.115  Sum_probs=89.4

Q ss_pred             CCCCCeEEEEcCC--CchHHHHHHHHHhCCCCcEEEEEecCC-chhHHHHHhcCCCCCeEEEEeCCCc---HHhhh----
Q 018512           39 GAAGFKVAILGAA--GGIGQPLAMLMKINPLVSVLHLYDVVN-TPGVTADISHMDTGAVVRGFLGQPQ---LENAL----  108 (354)
Q Consensus        39 ~~~~~kI~IiGa~--G~vG~~~a~~l~~~~~~~ei~L~D~~~-~~g~~~dl~~~~~~~~v~~~~~~~d---~~~al----  108 (354)
                      ..+.++|.|+||+  |.+|..++..|+..|.  +|++.|++. ......++............ +-+|   .++.+    
T Consensus        11 ~~~~k~vlITGa~~~~giG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~-Dv~~~~~v~~~~~~~~   87 (271)
T 3ek2_A           11 FLDGKRILLTGLLSNRSIAYGIAKACKREGA--ELAFTYVGDRFKDRITEFAAEFGSELVFPC-DVADDAQIDALFASLK   87 (271)
T ss_dssp             TTTTCEEEECCCCSTTSHHHHHHHHHHHTTC--EEEEEESSGGGHHHHHHHHHHTTCCCEEEC-CTTCHHHHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCCCCcHHHHHHHHHHHcCC--CEEEEecchhhHHHHHHHHHHcCCcEEEEC-CCCCHHHHHHHHHHHH
Confidence            4455699999998  8999999999999997  899999875 22222333211111111111 1122   22233    


Q ss_pred             ---CCCcEEEEcCCCCCC-----C--C-CC---HHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecCCCCCchHHHHHHH
Q 018512          109 ---TGMDLVIIPAGVPRK-----P--G-MT---RDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNSTVPIAAEVF  173 (354)
Q Consensus       109 ---~~aDvVIi~ag~~~~-----~--g-~~---r~d~~~~n~~~~~~i~~~i~~~~-p~a~viv~tNPv~~~~~~~~~~~  173 (354)
                         ...|++|+.||....     +  . .+   ....+..|+.....+.+.+..+- +.+.|+++|......        
T Consensus        88 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~--------  159 (271)
T 3ek2_A           88 THWDSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLGAER--------  159 (271)
T ss_dssp             HHCSCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEEEEEEEEEECGGGTS--------
T ss_pred             HHcCCCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhccCceEEEEecccccc--------
Confidence               367999999986532     1  1 22   23455677777777777776553 356667665322111        


Q ss_pred             HHhCCCCCCCEEEeccchHHHHHHHHHHHhCCCCCCCcceEE
Q 018512          174 KKAGTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVV  215 (354)
Q Consensus       174 ~~~~~~p~~kviG~t~ld~~r~~~~la~~l~v~~~~v~~~v~  215 (354)
                          +.|..-.++.+......+.+.++..++  +..|++..+
T Consensus       160 ----~~~~~~~Y~asKaa~~~~~~~la~e~~--~~gi~v~~v  195 (271)
T 3ek2_A          160 ----AIPNYNTMGLAKAALEASVRYLAVSLG--AKGVRVNAI  195 (271)
T ss_dssp             ----BCTTTTHHHHHHHHHHHHHHHHHHHHH--TTTCEEEEE
T ss_pred             ----CCCCccchhHHHHHHHHHHHHHHHHHH--hcCcEEEEE
Confidence                233333344443334456666776663  334544333

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*

Probab=97.33  E-value=0.00051  Score=63.69  Aligned_cols=148  Identities=12%  Similarity=0.103  Sum_probs=85.3

Q ss_pred             CCCeEEEEcCCCc--hHHHHHHHHHhCCCCcEEEEEecCCc-hhHHHHHhcCCCCCeEEEE-eCCCc---HHhhh-----
Q 018512           41 AGFKVAILGAAGG--IGQPLAMLMKINPLVSVLHLYDVVNT-PGVTADISHMDTGAVVRGF-LGQPQ---LENAL-----  108 (354)
Q Consensus        41 ~~~kI~IiGa~G~--vG~~~a~~l~~~~~~~ei~L~D~~~~-~g~~~dl~~~~~~~~v~~~-~~~~d---~~~al-----  108 (354)
                      +.+++.|+||+|+  +|.+++..|+..|.  .|++.|+++. .....++.....  .+..+ .+-+|   .++++     
T Consensus        30 ~gk~~lVTGasg~~GIG~aia~~la~~G~--~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~Dv~d~~~v~~~~~~~~~  105 (293)
T 3grk_A           30 QGKRGLILGVANNRSIAWGIAKAAREAGA--ELAFTYQGDALKKRVEPLAEELG--AFVAGHCDVADAASIDAVFETLEK  105 (293)
T ss_dssp             TTCEEEEECCCSSSSHHHHHHHHHHHTTC--EEEEEECSHHHHHHHHHHHHHHT--CEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCEEEEEcCCCCCcHHHHHHHHHHHCCC--EEEEEcCCHHHHHHHHHHHHhcC--CceEEECCCCCHHHHHHHHHHHHH
Confidence            3458999999888  99999999999997  8999998751 122222221111  12221 11122   22222     


Q ss_pred             --CCCcEEEEcCCCCCC-----C--CCC---HHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecCCCCCchHHHHHHHHH
Q 018512          109 --TGMDLVIIPAGVPRK-----P--GMT---RDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNSTVPIAAEVFKK  175 (354)
Q Consensus       109 --~~aDvVIi~ag~~~~-----~--g~~---r~d~~~~n~~~~~~i~~~i~~~~-p~a~viv~tNPv~~~~~~~~~~~~~  175 (354)
                        ...|++|+.||....     +  ..+   ....+..|+.....+.+.+..+- ..+.||++|......          
T Consensus       106 ~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~isS~~~~~----------  175 (293)
T 3grk_A          106 KWGKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADGGSILTLTYYGAEK----------  175 (293)
T ss_dssp             HTSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTCEEEEEEECGGGTS----------
T ss_pred             hcCCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEeehhhcc----------
Confidence              378999999997531     1  122   23456677777777777666554 357777776432111          


Q ss_pred             hCCCCCCCEEEeccchHHHHHHHHHHHhC
Q 018512          176 AGTYDPKKLLGVTMLDVVRANTFVAEVLG  204 (354)
Q Consensus       176 ~~~~p~~kviG~t~ld~~r~~~~la~~l~  204 (354)
                        +.|..-.++.+......+.+.+|..++
T Consensus       176 --~~~~~~~Y~asKaa~~~l~~~la~e~~  202 (293)
T 3grk_A          176 --VMPNYNVMGVAKAALEASVKYLAVDLG  202 (293)
T ss_dssp             --BCTTTTHHHHHHHHHHHHHHHHHHHHG
T ss_pred             --CCCchHHHHHHHHHHHHHHHHHHHHHh
Confidence              233333344444344556777777764

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*

Probab=97.33  E-value=0.0015  Score=58.90  Aligned_cols=111  Identities=19%  Similarity=0.204  Sum_probs=67.2

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCch--hHHHHHhcCCCCCeEEEEe-CCCc---HHhhhC------
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP--GVTADISHMDTGAVVRGFL-GQPQ---LENALT------  109 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~--g~~~dl~~~~~~~~v~~~~-~~~d---~~~al~------  109 (354)
                      .+++.|+||+|.+|..++..|+..|.  +|++.|++...  ....++   .  ..+..+. +-+|   ++++++      
T Consensus         5 ~k~vlVTGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~---~--~~~~~~~~D~~~~~~~~~~~~~~~~~~   77 (254)
T 1hdc_A            5 GKTVIITGGARGLGAEAARQAVAAGA--RVVLADVLDEEGAATAREL---G--DAARYQHLDVTIEEDWQRVVAYAREEF   77 (254)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHTT---G--GGEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHh---C--CceeEEEecCCCHHHHHHHHHHHHHHc
Confidence            46899999999999999999999998  89999987521  111222   1  1122211 1122   223333      


Q ss_pred             -CCcEEEEcCCCCCCC---CCC---HHHHHHHHHHHH----HHHHHHHhhhCCCeEEEEecC
Q 018512          110 -GMDLVIIPAGVPRKP---GMT---RDDLFNINAGIV----RTLCEGIAKCCPNATVNLISN  160 (354)
Q Consensus       110 -~aDvVIi~ag~~~~~---g~~---r~d~~~~n~~~~----~~i~~~i~~~~p~a~viv~tN  160 (354)
                       +.|++|+.||.....   ..+   ....+.-|+...    +.+.+.+++.. .+.||++|.
T Consensus        78 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS  138 (254)
T 1hdc_A           78 GSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAG-GGSIVNISS  138 (254)
T ss_dssp             SCCCEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECC
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CCEEEEECc
Confidence             899999999865321   122   223445565444    46666666554 456666653

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*

Probab=97.33  E-value=0.00099  Score=61.12  Aligned_cols=115  Identities=20%  Similarity=0.156  Sum_probs=72.4

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc---hhHHHHHhcCCCCCeEEEEe-CCCc---HHh-------h
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT---PGVTADISHMDTGAVVRGFL-GQPQ---LEN-------A  107 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~---~g~~~dl~~~~~~~~v~~~~-~~~d---~~~-------a  107 (354)
                      .+++.|+||+|.+|..++..|+..|.  +|++.|++..   .....++....  ..+..+. +-+|   ..+       .
T Consensus        29 ~k~vlVTGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~  104 (283)
T 1g0o_A           29 GKVALVTGAGRGIGREMAMELGRRGC--KVIVNYANSTESAEEVVAAIKKNG--SDAACVKANVGVVEDIVRMFEEAVKI  104 (283)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHHTTC--EEEEEESSCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEeCCchHHHHHHHHHHHHhC--CCeEEEEcCCCCHHHHHHHHHHHHHH
Confidence            45899999999999999999999987  8999998762   12223333322  1222211 1122   112       2


Q ss_pred             hCCCcEEEEcCCCCCCCC---CC---HHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecC
Q 018512          108 LTGMDLVIIPAGVPRKPG---MT---RDDLFNINAGIVRTLCEGIAKCC-PNATVNLISN  160 (354)
Q Consensus       108 l~~aDvVIi~ag~~~~~g---~~---r~d~~~~n~~~~~~i~~~i~~~~-p~a~viv~tN  160 (354)
                      +...|+||+.||......   .+   ....+..|+.....+.+.+.++- ..+.||++|.
T Consensus       105 ~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS  164 (283)
T 1g0o_A          105 FGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGS  164 (283)
T ss_dssp             HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECC
T ss_pred             cCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCeEEEEec
Confidence            347899999998753211   12   23456778887777777777662 4466666653

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}

Probab=97.33  E-value=0.0018  Score=58.34  Aligned_cols=148  Identities=14%  Similarity=0.117  Sum_probs=79.3

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCC-CCCeEEEE-eCCCc---HHhh-------
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMD-TGAVVRGF-LGQPQ---LENA-------  107 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~-~~~~v~~~-~~~~d---~~~a-------  107 (354)
                      .+++.|+||+|.+|..++..|+..|.  +|++.|++.  ......++.... ....+..+ .+-+|   .+++       
T Consensus         7 ~k~~lVTGas~GIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   84 (250)
T 3nyw_A            7 KGLAIITGASQGIGAVIAAGLATDGY--RVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKDIHQK   84 (250)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHHTC--EEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHHHHHh
Confidence            45799999999999999999999887  899999976  222233332211 00112221 11122   2222       


Q ss_pred             hCCCcEEEEcCCCCCCC--CCC---HHHHHHHHHHH----HHHHHHHHhhhCCCeEEEEecCCCCCchHHHHHHHHHhCC
Q 018512          108 LTGMDLVIIPAGVPRKP--GMT---RDDLFNINAGI----VRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGT  178 (354)
Q Consensus       108 l~~aDvVIi~ag~~~~~--g~~---r~d~~~~n~~~----~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~~~~~~~~~  178 (354)
                      +...|++|+.||.....  ..+   ....+..|+..    .+.+.+.+++. ..+.|+++|......            +
T Consensus        85 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-~~g~iv~isS~~~~~------------~  151 (250)
T 3nyw_A           85 YGAVDILVNAAAMFMDGSLSEPVDNFRKIMEINVIAQYGILKTVTEIMKVQ-KNGYIFNVASRAAKY------------G  151 (250)
T ss_dssp             HCCEEEEEECCCCCCCCCCSCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECC------------------
T ss_pred             cCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEEEEEccHHhcC------------C
Confidence            24789999999875322  122   12344556544    44444444444 356677766433221            1


Q ss_pred             CCCCCEEEeccchHHHHHHHHHHHhC
Q 018512          179 YDPKKLLGVTMLDVVRANTFVAEVLG  204 (354)
Q Consensus       179 ~p~~kviG~t~ld~~r~~~~la~~l~  204 (354)
                      .++.-.++.+......+.+.++..++
T Consensus       152 ~~~~~~Y~asKaa~~~l~~~la~e~~  177 (250)
T 3nyw_A          152 FADGGIYGSTKFALLGLAESLYRELA  177 (250)
T ss_dssp             -CCTTHHHHHHHHHHHHHHHHHHHHG
T ss_pred             CCCCcchHHHHHHHHHHHHHHHHHhh
Confidence            22222334443334456677777763

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}

Probab=97.32  E-value=0.00066  Score=61.37  Aligned_cols=114  Identities=13%  Similarity=0.190  Sum_probs=67.3

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCch----hHHHHHhcCCCCCeEEEEe-CCCc---HHhhh------
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP----GVTADISHMDTGAVVRGFL-GQPQ---LENAL------  108 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~----g~~~dl~~~~~~~~v~~~~-~~~d---~~~al------  108 (354)
                      +++.|+||+|.+|..++..|+..|.  +|++.|++...    ....++....  ..+..+. +-+|   .++++      
T Consensus         3 k~vlVTGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~~   78 (258)
T 3a28_C            3 KVAMVTGGAQGIGRGISEKLAADGF--DIAVADLPQQEEQAAETIKLIEAAD--QKAVFVGLDVTDKANFDSAIDEAAEK   78 (258)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHTC--EEEEEECGGGHHHHHHHHHHHHTTT--CCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEeCCcchHHHHHHHHHHHhcC--CcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            4799999999999999999999887  89999987532    1223333322  2222221 1122   22333      


Q ss_pred             -CCCcEEEEcCCCCCCCC---CC---HHHHHHHHHHH----HHHHHHHHhhhCCCeEEEEecC
Q 018512          109 -TGMDLVIIPAGVPRKPG---MT---RDDLFNINAGI----VRTLCEGIAKCCPNATVNLISN  160 (354)
Q Consensus       109 -~~aDvVIi~ag~~~~~g---~~---r~d~~~~n~~~----~~~i~~~i~~~~p~a~viv~tN  160 (354)
                       ...|++|+.||......   .+   ....+..|+..    .+.+.+.+++....+.||++|.
T Consensus        79 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS  141 (258)
T 3a28_C           79 LGGFDVLVNNAGIAQIKPLLEVTEEDLKQIYSVNVFSVFFGIQAASRKFDELGVKGKIINAAS  141 (258)
T ss_dssp             HTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCCEEEEECC
T ss_pred             hCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCcEEEEECc
Confidence             37999999998653211   22   22345556554    4444555554444356666654

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A

Probab=97.32  E-value=0.00053  Score=62.65  Aligned_cols=113  Identities=23%  Similarity=0.379  Sum_probs=68.1

Q ss_pred             CCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc--hhHHHHHhcCCCCCeEEEEe-CCCc---HHhh------
Q 018512           40 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFL-GQPQ---LENA------  107 (354)
Q Consensus        40 ~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~--~g~~~dl~~~~~~~~v~~~~-~~~d---~~~a------  107 (354)
                      -+.+++.|+||+|.+|.+++..|+..|.  .|++.|++..  .....++.     ..+..+. +-+|   .+++      
T Consensus        25 l~gk~vlVTGas~gIG~aia~~la~~G~--~V~~~~r~~~~~~~~~~~~~-----~~~~~~~~Dv~d~~~v~~~~~~~~~   97 (266)
T 3grp_A           25 LTGRKALVTGATGGIGEAIARCFHAQGA--IVGLHGTREDKLKEIAADLG-----KDVFVFSANLSDRKSIKQLAEVAER   97 (266)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHC-----SSEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHhC-----CceEEEEeecCCHHHHHHHHHHHHH
Confidence            3446899999999999999999999997  8999998752  22222221     1122211 1122   2222      


Q ss_pred             -hCCCcEEEEcCCCCCCC---CCC---HHHHHHHHHHH----HHHHHHHHhhhCCCeEEEEecC
Q 018512          108 -LTGMDLVIIPAGVPRKP---GMT---RDDLFNINAGI----VRTLCEGIAKCCPNATVNLISN  160 (354)
Q Consensus       108 -l~~aDvVIi~ag~~~~~---g~~---r~d~~~~n~~~----~~~i~~~i~~~~p~a~viv~tN  160 (354)
                       +...|++|+.||.....   ..+   ....+..|+..    .+.+.+.+++.. .+.||++|.
T Consensus        98 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~Iv~isS  160 (266)
T 3grp_A           98 EMEGIDILVNNAGITRDGLFVRMQDQDWDDVLAVNLTAASTLTRELIHSMMRRR-YGRIINITS  160 (266)
T ss_dssp             HHTSCCEEEECCCCC-----CCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECC
T ss_pred             HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-CcEEEEECC
Confidence             24799999999875321   112   23345567666    566666665543 456666654

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...

Probab=97.32  E-value=0.00089  Score=61.49  Aligned_cols=115  Identities=17%  Similarity=0.151  Sum_probs=64.4

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc--hhHHHHHhcCCCCCeEEEEe-CCCc---HHhhh-------
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFL-GQPQ---LENAL-------  108 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~--~g~~~dl~~~~~~~~v~~~~-~~~d---~~~al-------  108 (354)
                      .++|.|+||+|.+|..++..|+..|.  +|+++|++..  .....++.... ...+..+. +-+|   .++++       
T Consensus        28 ~k~vlITGasggIG~~la~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~d~~~v~~~~~~~~~~~  104 (286)
T 1xu9_A           28 GKKVIVTGASKGIGREMAYHLAKMGA--HVVVTARSKETLQKVVSHCLELG-AASAHYIAGTMEDMTFAEQFVAQAGKLM  104 (286)
T ss_dssp             TCEEEESSCSSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHHT-CSEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHHhC-CCceEEEeCCCCCHHHHHHHHHHHHHHc
Confidence            45899999999999999999999987  8999999752  22222232211 11233221 1122   22222       


Q ss_pred             CCCcEEEEc-CCCCCCC--CCCH---HHHHHHHHHHHHHHHHHHhhhC--CCeEEEEec
Q 018512          109 TGMDLVIIP-AGVPRKP--GMTR---DDLFNINAGIVRTLCEGIAKCC--PNATVNLIS  159 (354)
Q Consensus       109 ~~aDvVIi~-ag~~~~~--g~~r---~d~~~~n~~~~~~i~~~i~~~~--p~a~viv~t  159 (354)
                      .+.|+||+. +|.....  ..+.   ...+..|+.....+.+.+....  ..+.|+++|
T Consensus       105 g~iD~li~naag~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~g~iv~is  163 (286)
T 1xu9_A          105 GGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNGSIVVVS  163 (286)
T ss_dssp             TSCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEE
T ss_pred             CCCCEEEECCccCCCCccccCCHHHHHHHHHHHhhHHHHHHHHHHHHHHHCCCEEEEEC
Confidence            379999998 5654321  1222   2345556555444444433221  134556554

>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A

Probab=97.31  E-value=0.00052  Score=62.62  Aligned_cols=147  Identities=16%  Similarity=0.131  Sum_probs=81.7

Q ss_pred             CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc---hhHHHHHhcCCCCCeEEEEe-CCCc---HHhhh-----
Q 018512           41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT---PGVTADISHMDTGAVVRGFL-GQPQ---LENAL-----  108 (354)
Q Consensus        41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~---~g~~~dl~~~~~~~~v~~~~-~~~d---~~~al-----  108 (354)
                      +.++|.|+||+|.+|..++..|+..|.  +|++.+++..   +....++....  ..+..+. +-+|   ..+++     
T Consensus        28 ~~k~vlITGas~gIG~~la~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~v~~~~~~~~~  103 (271)
T 4iin_A           28 TGKNVLITGASKGIGAEIAKTLASMGL--KVWINYRSNAEVADALKNELEEKG--YKAAVIKFDAASESDFIEAIQTIVQ  103 (271)
T ss_dssp             SCCEEEETTCSSHHHHHHHHHHHHTTC--EEEEEESSCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC--EEEEEeCCCHHHHHHHHHHHHhcC--CceEEEECCCCCHHHHHHHHHHHHH
Confidence            345899999999999999999999998  8999998651   22223333322  2222221 1122   22223     


Q ss_pred             --CCCcEEEEcCCCCCCCC---CC---HHHHHHHHHHHH----HHHHHHHhhhCCCeEEEEecCCCCCchHHHHHHHHHh
Q 018512          109 --TGMDLVIIPAGVPRKPG---MT---RDDLFNINAGIV----RTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKA  176 (354)
Q Consensus       109 --~~aDvVIi~ag~~~~~g---~~---r~d~~~~n~~~~----~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~~~~~~~  176 (354)
                        .+.|++|+.||......   .+   ....+..|+...    +.+.+.+++.. .+.|+++|...       .    . 
T Consensus       104 ~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~-------~----~-  170 (271)
T 4iin_A          104 SDGGLSYLVNNAGVVRDKLAIKMKTEDFHHVIDNNLTSAFIGCREALKVMSKSR-FGSVVNVASII-------G----E-  170 (271)
T ss_dssp             HHSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHH-------H----H-
T ss_pred             hcCCCCEEEECCCcCCCcccccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcC-CCEEEEEechh-------h----c-
Confidence              38999999999754321   12   223445565444    44455555443 45666665311       0    1 


Q ss_pred             CCCCCCCEEEeccchHHHHHHHHHHHhC
Q 018512          177 GTYDPKKLLGVTMLDVVRANTFVAEVLG  204 (354)
Q Consensus       177 ~~~p~~kviG~t~ld~~r~~~~la~~l~  204 (354)
                      .+.|..-.++.+......+.+.++..++
T Consensus       171 ~~~~~~~~Y~asK~a~~~~~~~la~e~~  198 (271)
T 4iin_A          171 RGNMGQTNYSASKGGMIAMSKSFAYEGA  198 (271)
T ss_dssp             HCCTTCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCchHhHHHHHHHHHHHHHHHHHHH
Confidence            1333333444444334456666776653

>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*

Probab=97.31  E-value=0.0013  Score=65.46  Aligned_cols=104  Identities=7%  Similarity=0.091  Sum_probs=66.1

Q ss_pred             CCCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCC---CcEEE
Q 018512           39 GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTG---MDLVI  115 (354)
Q Consensus        39 ~~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~---aDvVI  115 (354)
                      ...++||+|||+ |.+|++++..|+..|.  +|+++|+++..  +.++........+..   +.++++++++   +|+||
T Consensus        12 ~~~~~~IgvIGl-G~MG~~lA~~La~~G~--~V~v~~r~~~~--~~~l~~~~~~~gi~~---~~s~~e~v~~l~~aDvVi   83 (480)
T 2zyd_A           12 HMSKQQIGVVGM-AVMGRNLALNIESRGY--TVSIFNRSREK--TEEVIAENPGKKLVP---YYTVKEFVESLETPRRIL   83 (480)
T ss_dssp             ---CBSEEEECC-SHHHHHHHHHHHTTTC--CEEEECSSHHH--HHHHHHHSTTSCEEE---CSSHHHHHHTBCSSCEEE
T ss_pred             ccCCCeEEEEcc-HHHHHHHHHHHHhCCC--eEEEEeCCHHH--HHHHHhhCCCCCeEE---eCCHHHHHhCCCCCCEEE
Confidence            344578999999 9999999999999888  89999997522  122221100112332   3466777776   99999


Q ss_pred             EcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecCCCCCc
Q 018512          116 IPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNST  165 (354)
Q Consensus       116 i~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~-p~a~viv~tNPv~~~  165 (354)
                      ++...+.               .++++++.+..+. |+.+||..+|-....
T Consensus        84 l~Vp~~~---------------~v~~vl~~l~~~l~~g~iIId~s~g~~~~  119 (480)
T 2zyd_A           84 LMVKAGA---------------GTDAAIDSLKPYLDKGDIIIDGGNTFFQD  119 (480)
T ss_dssp             ECSCSSS---------------HHHHHHHHHGGGCCTTCEEEECSCCCHHH
T ss_pred             EECCCHH---------------HHHHHHHHHHhhcCCCCEEEECCCCCHHH
Confidence            9853221               2334445555554 577888888876443

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}

Probab=97.31  E-value=0.00079  Score=62.00  Aligned_cols=156  Identities=17%  Similarity=0.196  Sum_probs=85.4

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCCCCeEEEEe-CCCc---HHhh-------h
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQ---LENA-------L  108 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~~~~v~~~~-~~~d---~~~a-------l  108 (354)
                      .+++.|+||+|.+|..++..|+..|.  +|++.|++.  ......++....  ..+..+. +-+|   .+++       +
T Consensus         8 gk~vlVTGas~GIG~aia~~la~~G~--~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~~~   83 (280)
T 3tox_A            8 GKIAIVTGASSGIGRAAALLFAREGA--KVVVTARNGNALAELTDEIAGGG--GEAAALAGDVGDEALHEALVELAVRRF   83 (280)
T ss_dssp             TCEEEESSTTSHHHHHHHHHHHHTTC--EEEECCSCHHHHHHHHHHHTTTT--CCEEECCCCTTCHHHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHhcC--CcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            35799999999999999999999998  899999976  233333443321  2222221 1112   2222       2


Q ss_pred             CCCcEEEEcCCCCCCCC----CCH---HHHHHHHHHHHHHHHH----HHhhhCCCeEEEEecCCCCCchHHHHHHHHHhC
Q 018512          109 TGMDLVIIPAGVPRKPG----MTR---DDLFNINAGIVRTLCE----GIAKCCPNATVNLISNPVNSTVPIAAEVFKKAG  177 (354)
Q Consensus       109 ~~aDvVIi~ag~~~~~g----~~r---~d~~~~n~~~~~~i~~----~i~~~~p~a~viv~tNPv~~~~~~~~~~~~~~~  177 (354)
                      ...|++|+.||.....+    .+.   ...+.-|+.....+.+    .+.+. ..+.|+++|......           .
T Consensus        84 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-~~g~iv~isS~~~~~-----------~  151 (280)
T 3tox_A           84 GGLDTAFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFLAAKYQVPAIAAL-GGGSLTFTSSFVGHT-----------A  151 (280)
T ss_dssp             SCCCEEEECCCCCCSCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-TCEEEEEECCSBTTT-----------B
T ss_pred             CCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCCEEEEEcChhhCc-----------C
Confidence            37899999998653221    222   2345556554444444    44433 356667666433221           1


Q ss_pred             CCCCCCEEEeccchHHHHHHHHHHHhCCCCCCCcceEE
Q 018512          178 TYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVV  215 (354)
Q Consensus       178 ~~p~~kviG~t~ld~~r~~~~la~~l~v~~~~v~~~v~  215 (354)
                      ++|..-.++.+......+.+.+|..++  +..|++..+
T Consensus       152 ~~~~~~~Y~asKaa~~~l~~~la~e~~--~~gIrvn~v  187 (280)
T 3tox_A          152 GFAGVAPYAASKAGLIGLVQALAVELG--ARGIRVNAL  187 (280)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHHHHHHHH--TTTEEEEEE
T ss_pred             CCCCchhHHHHHHHHHHHHHHHHHHhh--hcCeEEEEE
Confidence            222222333333334456677777763  334444333

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*

Probab=97.31  E-value=0.0005  Score=62.24  Aligned_cols=115  Identities=16%  Similarity=0.161  Sum_probs=67.2

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCch-h--HHHHHhcCCCCCeEEEEe-CCCc---HHhhh------
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP-G--VTADISHMDTGAVVRGFL-GQPQ---LENAL------  108 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~-g--~~~dl~~~~~~~~v~~~~-~~~d---~~~al------  108 (354)
                      .++|.|+||+|.+|..++..|+..|.  +|++.|++... .  ...++.... ...+..+. +-+|   +++++      
T Consensus         4 ~k~vlVTGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~v~~~~~~~~~~   80 (260)
T 1x1t_A            4 GKVAVVTGSTSGIGLGIATALAAQGA--DIVLNGFGDAAEIEKVRAGLAAQH-GVKVLYDGADLSKGEAVRGLVDNAVRQ   80 (260)
T ss_dssp             TCEEEETTCSSHHHHHHHHHHHHTTC--EEEEECCSCHHHHHHHHHHHHHHH-TSCEEEECCCTTSHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHcCC--EEEEEeCCcchHHHHHHHHHHhcc-CCcEEEEECCCCCHHHHHHHHHHHHHh
Confidence            35799999999999999999999997  89999987622 1  122232110 11222211 1122   22233      


Q ss_pred             -CCCcEEEEcCCCCCCCC---CC---HHHHHHHHHH----HHHHHHHHHhhhCCCeEEEEecC
Q 018512          109 -TGMDLVIIPAGVPRKPG---MT---RDDLFNINAG----IVRTLCEGIAKCCPNATVNLISN  160 (354)
Q Consensus       109 -~~aDvVIi~ag~~~~~g---~~---r~d~~~~n~~----~~~~i~~~i~~~~p~a~viv~tN  160 (354)
                       ...|++|+.||......   .+   ....+.-|+.    .++.+.+.+++.. .+.||++|.
T Consensus        81 ~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS  142 (260)
T 1x1t_A           81 MGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQG-FGRIINIAS  142 (260)
T ss_dssp             HSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECC
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCEEEEECc
Confidence             37999999998653211   12   2334555665    4445555555443 466676654

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}

Probab=97.30  E-value=0.00086  Score=60.83  Aligned_cols=156  Identities=14%  Similarity=0.145  Sum_probs=90.5

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEE-ecCC--chhHHHHHhcCCCCCeEEEE-eCCCc---HHhhh------
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLY-DVVN--TPGVTADISHMDTGAVVRGF-LGQPQ---LENAL------  108 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~-D~~~--~~g~~~dl~~~~~~~~v~~~-~~~~d---~~~al------  108 (354)
                      .+++.|+||+|.+|.+++..|+..|.  +|++. +.+.  ......++.....  .+..+ .+-+|   .++++      
T Consensus         8 ~k~vlVTGas~GIG~aia~~la~~G~--~V~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~Dv~~~~~v~~~~~~~~~~   83 (259)
T 3edm_A            8 NRTIVVAGAGRDIGRACAIRFAQEGA--NVVLTYNGAAEGAATAVAEIEKLGR--SALAIKADLTNAAEVEAAISAAADK   83 (259)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEECSSCHHHHHHHHHHHTTTS--CCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCC--EEEEEcCCCHHHHHHHHHHHHhcCC--ceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            45899999999999999999999998  88888 4444  2222334443321  12221 11122   22333      


Q ss_pred             -CCCcEEEEcCCCCCCC----CCCH---HHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecCCCCCchHHHHHHHHHhCCC
Q 018512          109 -TGMDLVIIPAGVPRKP----GMTR---DDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNSTVPIAAEVFKKAGTY  179 (354)
Q Consensus       109 -~~aDvVIi~ag~~~~~----g~~r---~d~~~~n~~~~~~i~~~i~~~~-p~a~viv~tNPv~~~~~~~~~~~~~~~~~  179 (354)
                       ...|++|+.||.....    ..+.   ...+.-|+.....+.+.+...- +.+.||++|...           -...+.
T Consensus        84 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~-----------~~~~~~  152 (259)
T 3edm_A           84 FGEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAKGGAIVTFSSQA-----------GRDGGG  152 (259)
T ss_dssp             HCSEEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHH-----------HHHCCS
T ss_pred             hCCCCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCEEEEEcCHH-----------hccCCC
Confidence             3789999999854211    1222   3456778888878888777654 245677665311           011133


Q ss_pred             CCCCEEEeccchHHHHHHHHHHHhCCCCCCCcceEE
Q 018512          180 DPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVV  215 (354)
Q Consensus       180 p~~kviG~t~ld~~r~~~~la~~l~v~~~~v~~~v~  215 (354)
                      |..-.++.+......+.+.+|..++  +. |++..+
T Consensus       153 ~~~~~Y~asKaa~~~l~~~la~e~~--~~-I~vn~v  185 (259)
T 3edm_A          153 PGALAYATSKGAVMTFTRGLAKEVG--PK-IRVNAV  185 (259)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHHT--TT-CEEEEE
T ss_pred             CCcHHHHHHHHHHHHHHHHHHHHHC--CC-CEEEEE
Confidence            3333344444444567778888875  33 654444

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*

Probab=97.30  E-value=0.0017  Score=59.24  Aligned_cols=147  Identities=18%  Similarity=0.200  Sum_probs=81.4

Q ss_pred             CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC---chhHHHHHhcCCCCCeEEEEe-CCCc---HHhhh-----
Q 018512           41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN---TPGVTADISHMDTGAVVRGFL-GQPQ---LENAL-----  108 (354)
Q Consensus        41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~---~~g~~~dl~~~~~~~~v~~~~-~~~d---~~~al-----  108 (354)
                      +.+++.|+||+|.+|.+++..|+..|.  .|++.|...   ......++....  ..+..+. +-+|   .++++     
T Consensus        27 ~~k~vlVTGas~gIG~aia~~la~~G~--~V~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~D~~d~~~v~~~~~~~~~  102 (269)
T 4dmm_A           27 TDRIALVTGASRGIGRAIALELAAAGA--KVAVNYASSAGAADEVVAAIAAAG--GEAFAVKADVSQESEVEALFAAVIE  102 (269)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC--EEEEEESSCHHHHHHHHHHHHHTT--CCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC--EEEEEeCCChHHHHHHHHHHHhcC--CcEEEEECCCCCHHHHHHHHHHHHH
Confidence            345799999999999999999999998  899998854   222233343322  1222221 1122   22223     


Q ss_pred             --CCCcEEEEcCCCCCCCC---CCH---HHHHHHHHHHHH----HHHHHHhhhCCCeEEEEecCCCCCchHHHHHHHHHh
Q 018512          109 --TGMDLVIIPAGVPRKPG---MTR---DDLFNINAGIVR----TLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKA  176 (354)
Q Consensus       109 --~~aDvVIi~ag~~~~~g---~~r---~d~~~~n~~~~~----~i~~~i~~~~p~a~viv~tNPv~~~~~~~~~~~~~~  176 (354)
                        ...|++|+.||......   .+.   ...+.-|+....    .+.+.+.+.. .+.||++|.-.       .   .. 
T Consensus       103 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~-------~---~~-  170 (269)
T 4dmm_A          103 RWGRLDVLVNNAGITRDTLLLRMKRDDWQSVLDLNLGGVFLCSRAAAKIMLKQR-SGRIINIASVV-------G---EM-  170 (269)
T ss_dssp             HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCHH-------H---HH-
T ss_pred             HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEECchh-------h---cC-
Confidence              37899999998754321   222   234555655444    4444444443 45666665311       0   11 


Q ss_pred             CCCCCCCEEEeccchHHHHHHHHHHHhC
Q 018512          177 GTYDPKKLLGVTMLDVVRANTFVAEVLG  204 (354)
Q Consensus       177 ~~~p~~kviG~t~ld~~r~~~~la~~l~  204 (354)
                       +.|..-.++.+...-..+.+.+|..++
T Consensus       171 -~~~~~~~Y~asK~a~~~l~~~la~e~~  197 (269)
T 4dmm_A          171 -GNPGQANYSAAKAGVIGLTKTVAKELA  197 (269)
T ss_dssp             -CCTTCHHHHHHHHHHHHHHHHHHHHHG
T ss_pred             -CCCCchhHHHHHHHHHHHHHHHHHHHh
Confidence             233333344444344456677777763

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A

Probab=97.30  E-value=0.0015  Score=59.38  Aligned_cols=148  Identities=12%  Similarity=0.049  Sum_probs=82.6

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCc---HHhhh-------CCC
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQ---LENAL-------TGM  111 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d---~~~al-------~~a  111 (354)
                      .++|.|+||+|.+|..++..|+..|.  +|++.|++...         ........ .+-+|   +++++       .+.
T Consensus         8 ~k~vlVTGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~---------~~~~~~~~-~Dl~~~~~v~~~~~~~~~~~g~i   75 (264)
T 2dtx_A            8 DKVVIVTGASMGIGRAIAERFVDEGS--KVIDLSIHDPG---------EAKYDHIE-CDVTNPDQVKASIDHIFKEYGSI   75 (264)
T ss_dssp             TCEEEEESCSSHHHHHHHHHHHHTTC--EEEEEESSCCC---------SCSSEEEE-CCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCC--EEEEEecCccc---------CCceEEEE-ecCCCHHHHHHHHHHHHHHcCCC
Confidence            35899999999999999999999998  89999987532         00011100 01112   22223       379


Q ss_pred             cEEEEcCCCCCCC---CCC---HHHHHHHHHHHHHHHHHHHhhh---CCCeEEEEecCCCCCchHHHHHHHHHhCCCCCC
Q 018512          112 DLVIIPAGVPRKP---GMT---RDDLFNINAGIVRTLCEGIAKC---CPNATVNLISNPVNSTVPIAAEVFKKAGTYDPK  182 (354)
Q Consensus       112 DvVIi~ag~~~~~---g~~---r~d~~~~n~~~~~~i~~~i~~~---~p~a~viv~tNPv~~~~~~~~~~~~~~~~~p~~  182 (354)
                      |+||+.||.....   ..+   ....+..|+.....+.+.+.++   ...+.||++|.-...            .+.|..
T Consensus        76 D~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~------------~~~~~~  143 (264)
T 2dtx_A           76 SVLVNNAGIESYGKIESMSMGEWRRIIDVNLFGYYYASKFAIPYMIRSRDPSIVNISSVQAS------------IITKNA  143 (264)
T ss_dssp             CEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEECCGGGT------------SCCTTB
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCchhc------------cCCCCc
Confidence            9999999865321   122   2334566766654444444332   124566666542211            122322


Q ss_pred             CEEEeccchHHHHHHHHHHHhCCCCCCCcceEEe
Q 018512          183 KLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVVG  216 (354)
Q Consensus       183 kviG~t~ld~~r~~~~la~~l~v~~~~v~~~v~G  216 (354)
                      -.++.+......+.+.++..++  +. |++.++.
T Consensus       144 ~~Y~~sK~a~~~~~~~la~e~~--~~-i~vn~v~  174 (264)
T 2dtx_A          144 SAYVTSKHAVIGLTKSIALDYA--PL-LRCNAVC  174 (264)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHT--TT-SEEEEEE
T ss_pred             hhHHHHHHHHHHHHHHHHHHhc--CC-cEEEEEE
Confidence            2333333334456677777775  33 6554443

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}

Probab=97.30  E-value=0.0008  Score=61.46  Aligned_cols=155  Identities=15%  Similarity=0.131  Sum_probs=88.1

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC---chhHHHHHhcCCCCCeEEEE-eCCCc---HHhhh-------
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN---TPGVTADISHMDTGAVVRGF-LGQPQ---LENAL-------  108 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~---~~g~~~dl~~~~~~~~v~~~-~~~~d---~~~al-------  108 (354)
                      +.+.|+||+|.+|..++..|+..|.  .|++.+...   .+....++....  ..+..+ .+-+|   .++++       
T Consensus        28 k~~lVTGas~GIG~aia~~la~~G~--~Vv~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~v~~~~~~~~~~~  103 (267)
T 3u5t_A           28 KVAIVTGASRGIGAAIAARLASDGF--TVVINYAGKAAAAEEVAGKIEAAG--GKALTAQADVSDPAAVRRLFATAEEAF  103 (267)
T ss_dssp             CEEEEESCSSHHHHHHHHHHHHHTC--EEEEEESSCSHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCC--EEEEEcCCCHHHHHHHHHHHHhcC--CeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            3799999999999999999999997  888875544   222233333322  122221 11122   22222       


Q ss_pred             CCCcEEEEcCCCCCCCC---CC---HHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecCCCCCchHHHHHHHHHhCCCCC
Q 018512          109 TGMDLVIIPAGVPRKPG---MT---RDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNSTVPIAAEVFKKAGTYDP  181 (354)
Q Consensus       109 ~~aDvVIi~ag~~~~~g---~~---r~d~~~~n~~~~~~i~~~i~~~~-p~a~viv~tNPv~~~~~~~~~~~~~~~~~p~  181 (354)
                      ...|++|+.||......   .+   ....+.-|+.....+.+.+.+.- +.+.||++|...   .       ..  +.|.
T Consensus       104 g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~---~-------~~--~~~~  171 (267)
T 3u5t_A          104 GGVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVGGRIINMSTSQ---V-------GL--LHPS  171 (267)
T ss_dssp             SCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCTH---H-------HH--CCTT
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeEEEEeChh---h-------cc--CCCC
Confidence            37899999998753221   12   23345578777666666655443 356777776421   0       11  2333


Q ss_pred             CCEEEeccchHHHHHHHHHHHhCCCCCCCcceEE
Q 018512          182 KKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVV  215 (354)
Q Consensus       182 ~kviG~t~ld~~r~~~~la~~l~v~~~~v~~~v~  215 (354)
                      .-.++.+......+.+.+|..++  +..|++..+
T Consensus       172 ~~~Y~asKaa~~~l~~~la~e~~--~~gI~vn~v  203 (267)
T 3u5t_A          172 YGIYAAAKAGVEAMTHVLSKELR--GRDITVNAV  203 (267)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHTT--TSCCEEEEE
T ss_pred             chHHHHHHHHHHHHHHHHHHHhh--hhCCEEEEE
Confidence            33344444444567778888774  445544433

>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*

Probab=97.29  E-value=0.001  Score=64.42  Aligned_cols=97  Identities=14%  Similarity=0.130  Sum_probs=58.5

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHh-CCCCcEEEEEecCCc-hhHHHH-HhcCC------CCCe--EE--E-E-eCCCcHHh
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKI-NPLVSVLHLYDVVNT-PGVTAD-ISHMD------TGAV--VR--G-F-LGQPQLEN  106 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~-~~~~~ei~L~D~~~~-~g~~~d-l~~~~------~~~~--v~--~-~-~~~~d~~~  106 (354)
                      +|||+|||+ |.+|..++..|+. .|+  +|.++|..+. ...... +....      ..+.  +.  . . ..++++++
T Consensus         2 ~mkI~ViGa-G~~G~~~a~~La~~~G~--~V~~~~~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (404)
T 3c7a_A            2 TVKVCVCGG-GNGAHTLSGLAASRDGV--EVRVLTLFADEAERWTKALGADELTVIVNEKDGTQTEVKSRPKVITKDPEI   78 (404)
T ss_dssp             CEEEEEECC-SHHHHHHHHHHTTSTTE--EEEEECCSTTHHHHHHHHHTTSCEEEEEECSSSCEEEEEECCSEEESCHHH
T ss_pred             CceEEEECC-CHHHHHHHHHHHhCCCC--EEEEEeCCCCcHHHHHHHHhhccceeeeecCCCccceeeccceEEeCCHHH
Confidence            379999999 9999999999987 477  8999993321 112222 22111      0001  11  0 0 02356778


Q ss_pred             hhCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCeEEEE
Q 018512          107 ALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNL  157 (354)
Q Consensus       107 al~~aDvVIi~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~-p~a~viv  157 (354)
                      ++++||+||++....                ...++++.+..+. |+.+|+.
T Consensus        79 a~~~aD~Vilav~~~----------------~~~~v~~~l~~~l~~~~ivv~  114 (404)
T 3c7a_A           79 AISGADVVILTVPAF----------------AHEGYFQAMAPYVQDSALIVG  114 (404)
T ss_dssp             HHTTCSEEEECSCGG----------------GHHHHHHHHTTTCCTTCEEEE
T ss_pred             HhCCCCEEEEeCchH----------------HHHHHHHHHHhhCCCCcEEEE
Confidence            899999999985322                1245566666655 4665443

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}

Probab=97.29  E-value=0.00088  Score=61.54  Aligned_cols=157  Identities=12%  Similarity=0.113  Sum_probs=86.9

Q ss_pred             CCeEEEEcCC--CchHHHHHHHHHhCCCCcEEEEEecCCc-hhHHHHHhc-CCCCCeEEE-EeCCCcHHhhh-------C
Q 018512           42 GFKVAILGAA--GGIGQPLAMLMKINPLVSVLHLYDVVNT-PGVTADISH-MDTGAVVRG-FLGQPQLENAL-------T  109 (354)
Q Consensus        42 ~~kI~IiGa~--G~vG~~~a~~l~~~~~~~ei~L~D~~~~-~g~~~dl~~-~~~~~~v~~-~~~~~d~~~al-------~  109 (354)
                      .++|.|+||+  |.+|..++..|+..|.  +|++.|++.. .....++.. ......+.. +....+.++++       .
T Consensus        21 ~k~vlVTGas~~~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g   98 (285)
T 2p91_A           21 GKRALITGVANERSIAYGIAKSFHREGA--QLAFTYATPKLEKRVREIAKGFGSDLVVKCDVSLDEDIKNLKKFLEENWG   98 (285)
T ss_dssp             TCEEEECCCSSTTSHHHHHHHHHHHTTC--EEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTS
T ss_pred             CCEEEEECCCCCCcHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            3579999998  8999999999999987  8999998752 222233322 111011111 00011222233       3


Q ss_pred             CCcEEEEcCCCCCC-----C--CCC---HHHHHHHHHHHHHHHHHHHhhhC--CCeEEEEecCCCCCchHHHHHHHHHhC
Q 018512          110 GMDLVIIPAGVPRK-----P--GMT---RDDLFNINAGIVRTLCEGIAKCC--PNATVNLISNPVNSTVPIAAEVFKKAG  177 (354)
Q Consensus       110 ~aDvVIi~ag~~~~-----~--g~~---r~d~~~~n~~~~~~i~~~i~~~~--p~a~viv~tNPv~~~~~~~~~~~~~~~  177 (354)
                      ..|+||+.||....     +  ..+   ....+..|+.....+++.+.++-  ..+.||++|.....            .
T Consensus        99 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~------------~  166 (285)
T 2p91_A           99 SLDIIVHSIAYAPKEEFKGGVIDTSREGFKIAMDISVYSLIALTRELLPLMEGRNGAIVTLSYYGAE------------K  166 (285)
T ss_dssp             CCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGGTTSCCEEEEEECGGGT------------S
T ss_pred             CCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCEEEEEccchhc------------c
Confidence            78999999987532     1  122   23456778877777777776553  24667766532111            1


Q ss_pred             CCCCCCEEEeccchHHHHHHHHHHHhCCCCCCCcceE
Q 018512          178 TYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPV  214 (354)
Q Consensus       178 ~~p~~kviG~t~ld~~r~~~~la~~l~v~~~~v~~~v  214 (354)
                      +.|..-.++.+......+.+.++..++  +..|++..
T Consensus       167 ~~~~~~~Y~~sK~a~~~~~~~la~e~~--~~gi~v~~  201 (285)
T 2p91_A          167 VVPHYNVMGIAKAALESTVRYLAYDIA--KHGHRINA  201 (285)
T ss_dssp             BCTTTTHHHHHHHHHHHHHHHHHHHHH--TTTCEEEE
T ss_pred             CCCCccHHHHHHHHHHHHHHHHHHHhc--ccCcEEEE
Confidence            222222344443334456666776663  33444433

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}

Probab=97.29  E-value=0.0016  Score=59.17  Aligned_cols=157  Identities=15%  Similarity=0.119  Sum_probs=91.1

Q ss_pred             CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC-----chhHHHHHhcCCCCCeEEEEe-CCCc---HHhhh---
Q 018512           41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN-----TPGVTADISHMDTGAVVRGFL-GQPQ---LENAL---  108 (354)
Q Consensus        41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~-----~~g~~~dl~~~~~~~~v~~~~-~~~d---~~~al---  108 (354)
                      +.+++.|+||+|.+|..++..|+..|.  .|++.|+..     .+....++....  ..+..+. +-+|   .++.+   
T Consensus        10 ~~k~vlVTGas~GIG~aia~~la~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~d~~~v~~~~~~~   85 (262)
T 3ksu_A           10 KNKVIVIAGGIKNLGALTAKTFALESV--NLVLHYHQAKDSDTANKLKDELEDQG--AKVALYQSDLSNEEEVAKLFDFA   85 (262)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHTTSSC--EEEEEESCGGGHHHHHHHHHHHHTTT--CEEEEEECCCCSHHHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC--EEEEEecCccCHHHHHHHHHHHHhcC--CcEEEEECCCCCHHHHHHHHHHH
Confidence            345899999999999999999999988  899988753     122233444332  2333321 1122   22222   


Q ss_pred             ----CCCcEEEEcCCCCCCCC---CC---HHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecCCCCCchHHHHHHHHHhC
Q 018512          109 ----TGMDLVIIPAGVPRKPG---MT---RDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNSTVPIAAEVFKKAG  177 (354)
Q Consensus       109 ----~~aDvVIi~ag~~~~~g---~~---r~d~~~~n~~~~~~i~~~i~~~~-p~a~viv~tNPv~~~~~~~~~~~~~~~  177 (354)
                          ...|++|+.||......   .+   ....+..|+.....+.+.+..+- +.+.|++++.....         .   
T Consensus        86 ~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~isS~~~~---------~---  153 (262)
T 3ksu_A           86 EKEFGKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNPNGHIITIATSLLA---------A---  153 (262)
T ss_dssp             HHHHCSEEEEEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEECCCHHH---------H---
T ss_pred             HHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCEEEEEechhhc---------c---
Confidence                37899999998654321   12   23345678887777777776553 45667776642211         1   


Q ss_pred             CCCCCCEEEeccchHHHHHHHHHHHhCCCCCCCcceEE
Q 018512          178 TYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVV  215 (354)
Q Consensus       178 ~~p~~kviG~t~ld~~r~~~~la~~l~v~~~~v~~~v~  215 (354)
                      +.|..-.++.+......+.+.+|..++  +..|++..+
T Consensus       154 ~~~~~~~Y~asKaa~~~l~~~la~e~~--~~gi~vn~v  189 (262)
T 3ksu_A          154 YTGFYSTYAGNKAPVEHYTRAASKELM--KQQISVNAI  189 (262)
T ss_dssp             HHCCCCC-----CHHHHHHHHHHHHTT--TTTCEEEEE
T ss_pred             CCCCCchhHHHHHHHHHHHHHHHHHHH--HcCcEEEEE
Confidence            122334567766556678888888874  344544333

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*

Probab=97.29  E-value=0.0031  Score=57.26  Aligned_cols=117  Identities=12%  Similarity=0.078  Sum_probs=69.4

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCCCCeEEEE-eCCCcH---Hh-------hh
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGF-LGQPQL---EN-------AL  108 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~~~~v~~~-~~~~d~---~~-------al  108 (354)
                      .+++.|+||+|.+|..++..|+..|.  .|++.|++.  ......++........+..+ .+-+|.   ++       .+
T Consensus         8 ~k~~lVTGas~GIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   85 (265)
T 3lf2_A            8 EAVAVVTGGSSGIGLATVELLLEAGA--AVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEACERTL   85 (265)
T ss_dssp             TCEEEEETCSSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHHHHHHc
Confidence            45899999999999999999999998  899999976  22233344331111112222 111221   12       23


Q ss_pred             CCCcEEEEcCCCCCCC---CCCH---HHHHHHHHHHHHHHHHHHhhh---CCCeEEEEecC
Q 018512          109 TGMDLVIIPAGVPRKP---GMTR---DDLFNINAGIVRTLCEGIAKC---CPNATVNLISN  160 (354)
Q Consensus       109 ~~aDvVIi~ag~~~~~---g~~r---~d~~~~n~~~~~~i~~~i~~~---~p~a~viv~tN  160 (354)
                      ...|++|+.||.....   ..+.   ...+..|+.....+.+.+..+   ...+.||++|.
T Consensus        86 g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS  146 (265)
T 3lf2_A           86 GCASILVNNAGQGRVSTFAETTDEAWSEELQLKFFSVIHPVRAFLPQLESRADAAIVCVNS  146 (265)
T ss_dssp             CSCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTEEEEEEEE
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeEEEEECC
Confidence            4789999999875321   2222   334566766665555555432   23566666653

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}

Probab=97.28  E-value=0.0021  Score=59.12  Aligned_cols=157  Identities=17%  Similarity=0.180  Sum_probs=86.9

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCCCCeEEEEe-CCCc---HHhhh-------
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQ---LENAL-------  108 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~~~~v~~~~-~~~d---~~~al-------  108 (354)
                      .+.+.|+||+|.+|.+++..|+..|.  .|++.|++.  ......++....  ..+..+. +-+|   .++++       
T Consensus        28 ~k~~lVTGas~GIG~aia~~la~~G~--~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~~~  103 (283)
T 3v8b_A           28 SPVALITGAGSGIGRATALALAADGV--TVGALGRTRTEVEEVADEIVGAG--GQAIALEADVSDELQMRNAVRDLVLKF  103 (283)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHTTC--EEEEEESSHHHHHHHHHHHTTTT--CCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcC--CcEEEEEccCCCHHHHHHHHHHHHHHh
Confidence            34799999999999999999999998  899999876  233334444322  2222221 1122   22222       


Q ss_pred             CCCcEEEEcCCCCCC--C--CCCH---HHHHHHHHHHHHH----HHHHHhhhCCCeEEEEecCCCCCchHHHHHHHHHhC
Q 018512          109 TGMDLVIIPAGVPRK--P--GMTR---DDLFNINAGIVRT----LCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAG  177 (354)
Q Consensus       109 ~~aDvVIi~ag~~~~--~--g~~r---~d~~~~n~~~~~~----i~~~i~~~~p~a~viv~tNPv~~~~~~~~~~~~~~~  177 (354)
                      ...|++|+.||....  +  ..+.   ...+..|+.....    +.+.+++. ..+.||++|.-....          ..
T Consensus       104 g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-~~g~Iv~isS~~~~~----------~~  172 (283)
T 3v8b_A          104 GHLDIVVANAGINGVWAPIDDLKPFEWDETIAVNLRGTFLTLHLTVPYLKQR-GGGAIVVVSSINGTR----------TF  172 (283)
T ss_dssp             SCCCEEEECCCCCCCBCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCSBTTT----------BC
T ss_pred             CCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCceEEEEcChhhcc----------CC
Confidence            379999999997432  1  2222   2345566554444    44444544 356666665432211          00


Q ss_pred             CCCCCCEEEeccchHHHHHHHHHHHhCCCCCCCcceEE
Q 018512          178 TYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVV  215 (354)
Q Consensus       178 ~~p~~kviG~t~ld~~r~~~~la~~l~v~~~~v~~~v~  215 (354)
                      +.|..-.++.+......+.+.+|..++  +..|++..+
T Consensus       173 ~~~~~~~Y~asKaa~~~l~~~la~e~~--~~gI~vn~v  208 (283)
T 3v8b_A          173 TTPGATAYTATKAAQVAIVQQLALELG--KHHIRVNAV  208 (283)
T ss_dssp             CSTTCHHHHHHHHHHHHHHHHHHHHTT--TTTEEEEEE
T ss_pred             CCCCchHHHHHHHHHHHHHHHHHHHhC--ccCcEEEEE
Confidence            122222233333334456777787764  445544333

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}

Probab=97.28  E-value=0.0006  Score=60.46  Aligned_cols=110  Identities=18%  Similarity=0.168  Sum_probs=64.8

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc--hhHHHHHhcCCCCCeEEEEeCCCc---HHhhh-------CC
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFLGQPQ---LENAL-------TG  110 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~--~g~~~dl~~~~~~~~v~~~~~~~d---~~~al-------~~  110 (354)
                      ++|.|+||+|.+|+.++..|+..|.  +|++.|++..  .....++..    ...... +-.|   +++++       .+
T Consensus         6 k~vlVtGasggiG~~~a~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~----~~~~~~-D~~~~~~~~~~~~~~~~~~~~   78 (234)
T 2ehd_A            6 GAVLITGASRGIGEATARLLHAKGY--RVGLMARDEKRLQALAAELEG----ALPLPG-DVREEGDWARAVAAMEEAFGE   78 (234)
T ss_dssp             CEEEESSTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHSTT----CEEEEC-CTTCHHHHHHHHHHHHHHHSC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHhhh----ceEEEe-cCCCHHHHHHHHHHHHHHcCC
Confidence            4799999999999999999999987  8999998752  111222211    111111 1112   22222       47


Q ss_pred             CcEEEEcCCCCCCCC---CC---HHHHHHHHHHHH----HHHHHHHhhhCCCeEEEEecC
Q 018512          111 MDLVIIPAGVPRKPG---MT---RDDLFNINAGIV----RTLCEGIAKCCPNATVNLISN  160 (354)
Q Consensus       111 aDvVIi~ag~~~~~g---~~---r~d~~~~n~~~~----~~i~~~i~~~~p~a~viv~tN  160 (354)
                      .|+||++||......   .+   ..+.+..|+...    +.+.+.+++. ..+.|+++|.
T Consensus        79 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~-~~~~iv~isS  137 (234)
T 2ehd_A           79 LSALVNNAGVGVMKPVHELTLEEWRLVLDTNLTGAFLGIRHAVPALLRR-GGGTIVNVGS  137 (234)
T ss_dssp             CCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTT-TCEEEEEECC
T ss_pred             CCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC-CCcEEEEECC
Confidence            899999998653211   12   233455666554    4555555543 3466666654

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=97.28  E-value=0.00099  Score=60.53  Aligned_cols=114  Identities=15%  Similarity=0.058  Sum_probs=67.5

Q ss_pred             CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCCCCeEEEEe-CCCc---HHhhh------
Q 018512           41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQ---LENAL------  108 (354)
Q Consensus        41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~~~~v~~~~-~~~d---~~~al------  108 (354)
                      +.+++.|+||+|.+|.+++..|+..|.  +|++.|++.  .+....++....  ..+..+. +-+|   .++++      
T Consensus        10 ~~k~vlVTGas~gIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~~   85 (264)
T 3ucx_A           10 TDKVVVISGVGPALGTTLARRCAEQGA--DLVLAARTVERLEDVAKQVTDTG--RRALSVGTDITDDAQVAHLVDETMKA   85 (264)
T ss_dssp             TTCEEEEESCCTTHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCcEEEEECCCcHHHHHHHHHHHHCcC--EEEEEeCCHHHHHHHHHHHHhcC--CcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            345899999999999999999999998  899999976  233334444322  1222221 1122   22222      


Q ss_pred             -CCCcEEEEcCCCCCCCC----CCH---HHHHHHHHHHHHHHHH----HHhhhCCCeEEEEecC
Q 018512          109 -TGMDLVIIPAGVPRKPG----MTR---DDLFNINAGIVRTLCE----GIAKCCPNATVNLISN  160 (354)
Q Consensus       109 -~~aDvVIi~ag~~~~~g----~~r---~d~~~~n~~~~~~i~~----~i~~~~p~a~viv~tN  160 (354)
                       ...|++|+.||.....+    .+.   ...+.-|+.....+.+    .+++.  .+.||++|.
T Consensus        86 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~--~g~iv~isS  147 (264)
T 3ucx_A           86 YGRVDVVINNAFRVPSMKPFANTTFEHMRDAIELTVFGALRLIQGFTPALEES--KGAVVNVNS  147 (264)
T ss_dssp             TSCCSEEEECCCSCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHH--TCEEEEECC
T ss_pred             cCCCcEEEECCCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc--CCEEEEECc
Confidence             37899999998642221    222   2334556554444444    44443  266666654

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}

Probab=97.27  E-value=0.0012  Score=60.23  Aligned_cols=113  Identities=15%  Similarity=0.183  Sum_probs=68.1

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCCCCeEEEEe-CCCc---HHhh-------hC
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQ---LENA-------LT  109 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~~~~v~~~~-~~~d---~~~a-------l~  109 (354)
                      +++.|+||+|.+|..++..|+..|.  .|++.|++.  ......++....  ..+..+. +-+|   .+++       +.
T Consensus         5 k~~lVTGas~GIG~aia~~la~~G~--~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~~~g   80 (264)
T 3tfo_A            5 KVILITGASGGIGEGIARELGVAGA--KILLGARRQARIEAIATEIRDAG--GTALAQVLDVTDRHSVAAFAQAAVDTWG   80 (264)
T ss_dssp             CEEEESSTTSHHHHHHHHHHHHTTC--EEEEEESSHHHHHHHHHHHHHTT--CEEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CEEEEeCCccHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHhcC--CcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            4799999999999999999999997  899999976  233334444332  2222221 1122   2222       34


Q ss_pred             CCcEEEEcCCCCCCCC---CCH---HHHHHHHHHHH----HHHHHHHhhhCCCeEEEEecC
Q 018512          110 GMDLVIIPAGVPRKPG---MTR---DDLFNINAGIV----RTLCEGIAKCCPNATVNLISN  160 (354)
Q Consensus       110 ~aDvVIi~ag~~~~~g---~~r---~d~~~~n~~~~----~~i~~~i~~~~p~a~viv~tN  160 (354)
                      ..|++|+.||......   .+.   ...+..|+...    +.+.+.+++. ..+.||++|.
T Consensus        81 ~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-~~g~IV~isS  140 (264)
T 3tfo_A           81 RIDVLVNNAGVMPLSPLAAVKVDEWERMIDVNIKGVLWGIGAVLPIMEAQ-RSGQIINIGS  140 (264)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECC
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC-CCeEEEEEcC
Confidence            7899999998753221   122   23445565544    4445555544 3566676654

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*

Probab=97.26  E-value=0.0004  Score=62.99  Aligned_cols=116  Identities=12%  Similarity=0.136  Sum_probs=71.1

Q ss_pred             CCeEEEEcCC--CchHHHHHHHHHhCCCCcEEEEEecCCc-hhHHHHHhcCCCCCeEEEEeCCCc---HHhhhC------
Q 018512           42 GFKVAILGAA--GGIGQPLAMLMKINPLVSVLHLYDVVNT-PGVTADISHMDTGAVVRGFLGQPQ---LENALT------  109 (354)
Q Consensus        42 ~~kI~IiGa~--G~vG~~~a~~l~~~~~~~ei~L~D~~~~-~g~~~dl~~~~~~~~v~~~~~~~d---~~~al~------  109 (354)
                      .+++.|+||+  |.+|..++..|+..|.  +|++.|++.. .....++........... .+-+|   .+++++      
T Consensus         8 ~k~vlVTGas~~~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~l~~~~~~~~~~~-~D~~~~~~v~~~~~~~~~~~   84 (261)
T 2wyu_A            8 GKKALVMGVTNQRSLGFAIAAKLKEAGA--EVALSYQAERLRPEAEKLAEALGGALLFR-ADVTQDEELDALFAGVKEAF   84 (261)
T ss_dssp             TCEEEEESCCSSSSHHHHHHHHHHHHTC--EEEEEESCGGGHHHHHHHHHHTTCCEEEE-CCTTCHHHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCCCCcHHHHHHHHHHHCCC--EEEEEcCCHHHHHHHHHHHHhcCCcEEEE-CCCCCHHHHHHHHHHHHHHc
Confidence            3589999998  8999999999999887  8999998752 222233322111111111 11122   223333      


Q ss_pred             -CCcEEEEcCCCCCC-----C--CCC---HHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecC
Q 018512          110 -GMDLVIIPAGVPRK-----P--GMT---RDDLFNINAGIVRTLCEGIAKCC-PNATVNLISN  160 (354)
Q Consensus       110 -~aDvVIi~ag~~~~-----~--g~~---r~d~~~~n~~~~~~i~~~i~~~~-p~a~viv~tN  160 (354)
                       ..|+||+.||....     +  ..+   ....+..|+.....+.+.+.++- ..+.||++|.
T Consensus        85 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS  147 (261)
T 2wyu_A           85 GGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTY  147 (261)
T ss_dssp             SSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEEC
T ss_pred             CCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHhccCCEEEEEec
Confidence             78999999987532     1  122   23456778888888887776543 2356777663

>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6

Probab=97.25  E-value=0.0011  Score=65.87  Aligned_cols=100  Identities=11%  Similarity=0.109  Sum_probs=61.7

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCch--hHHHHHhcCCCCCeEEEEeCCCcHHhhhC---CCcEEEEc
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP--GVTADISHMDTGAVVRGFLGQPQLENALT---GMDLVIIP  117 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~--g~~~dl~~~~~~~~v~~~~~~~d~~~al~---~aDvVIi~  117 (354)
                      |||+|||+ |.+|+.++..|...|+  +|.++|+++..  ....+.........+..   +.+++++++   ++|+||++
T Consensus         2 MkIgVIG~-G~mG~~lA~~La~~G~--~V~v~dr~~~~~~~l~~~~g~~~~~~~i~~---~~~~~e~v~~l~~aDvVila   75 (478)
T 1pgj_A            2 MDVGVVGL-GVMGANLALNIAEKGF--KVAVFNRTYSKSEEFMKANASAPFAGNLKA---FETMEAFAASLKKPRKALIL   75 (478)
T ss_dssp             BSEEEECC-SHHHHHHHHHHHHTTC--CEEEECSSHHHHHHHHHHTTTSTTGGGEEE---CSCHHHHHHHBCSSCEEEEC
T ss_pred             CEEEEECh-HHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHhcCCCCCCCCeEE---ECCHHHHHhcccCCCEEEEe
Confidence            79999999 9999999999999888  89999987521  11111110000111332   346666665   59999998


Q ss_pred             CCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecCCCC
Q 018512          118 AGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVN  163 (354)
Q Consensus       118 ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~-p~a~viv~tNPv~  163 (354)
                      ....               ..+.++++.+..+. |+.+||..+|-..
T Consensus        76 Vp~~---------------~~v~~vl~~l~~~l~~g~iIId~sng~~  107 (478)
T 1pgj_A           76 VQAG---------------AATDSTIEQLKKVFEKGDILVDTGNAHF  107 (478)
T ss_dssp             CCCS---------------HHHHHHHHHHHHHCCTTCEEEECCCCCH
T ss_pred             cCCh---------------HHHHHHHHHHHhhCCCCCEEEECCCCCh
Confidence            5322               01233334444444 5677777777653

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...

Probab=97.25  E-value=0.0021  Score=59.01  Aligned_cols=36  Identities=17%  Similarity=0.163  Sum_probs=32.2

Q ss_pred             CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC
Q 018512           41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   78 (354)
Q Consensus        41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~   78 (354)
                      +.+++.|+||+|.+|..++..|+..|.  +|++.|++.
T Consensus        22 ~~k~~lVTGas~gIG~aia~~L~~~G~--~V~~~~r~~   57 (288)
T 2x9g_A           22 EAPAAVVTGAAKRIGRAIAVKLHQTGY--RVVIHYHNS   57 (288)
T ss_dssp             CCCEEEETTCSSHHHHHHHHHHHHHTC--EEEEEESSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC--eEEEEeCCc
Confidence            345899999999999999999999887  899999976

>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*

Probab=97.25  E-value=0.0017  Score=64.55  Aligned_cols=98  Identities=8%  Similarity=0.071  Sum_probs=62.7

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCC---CcEEEEcC
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTG---MDLVIIPA  118 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~---aDvVIi~a  118 (354)
                      .+||+|||+ |.+|.+++..|...|+  +|.++|+++...  .++........+..   +.++++++++   +|+||++.
T Consensus         5 ~~~IgvIG~-G~mG~~lA~~L~~~G~--~V~v~dr~~~~~--~~l~~~~~~~gi~~---~~s~~e~v~~l~~aDvVilav   76 (474)
T 2iz1_A            5 QANFGVVGM-AVMGKNLALNVESRGY--TVAIYNRTTSKT--EEVFKEHQDKNLVF---TKTLEEFVGSLEKPRRIMLMV   76 (474)
T ss_dssp             TBSEEEECC-SHHHHHHHHHHHHTTC--CEEEECSSHHHH--HHHHHHTTTSCEEE---CSSHHHHHHTBCSSCEEEECC
T ss_pred             CCcEEEEee-HHHHHHHHHHHHhCCC--EEEEEcCCHHHH--HHHHHhCcCCCeEE---eCCHHHHHhhccCCCEEEEEc
Confidence            468999999 9999999999999887  899999875211  11211100112332   3466676665   99999985


Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecCCC
Q 018512          119 GVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPV  162 (354)
Q Consensus       119 g~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~-p~a~viv~tNPv  162 (354)
                      ..+               ..+.++++.+.... |+.+||..+|-.
T Consensus        77 p~~---------------~~v~~vl~~l~~~l~~g~iiId~s~~~  106 (474)
T 2iz1_A           77 QAG---------------AATDATIKSLLPLLDIGDILIDGGNTH  106 (474)
T ss_dssp             CTT---------------HHHHHHHHHHGGGCCTTCEEEECSCCC
T ss_pred             cCc---------------hHHHHHHHHHHhhCCCCCEEEECCCCC
Confidence            322               12334445555554 567777777754

>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*

Probab=97.24  E-value=0.00028  Score=64.05  Aligned_cols=92  Identities=16%  Similarity=0.202  Sum_probs=58.7

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCC-CCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcCCCC
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINP-LVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVP  121 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~-~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~ag~~  121 (354)
                      |||+|||+ |.+|+.++..|...+ .  +|.++|+++..  ...+.... .  +...   .+..+++ ++|+||++.. +
T Consensus         1 m~i~iiG~-G~mG~~~a~~l~~~g~~--~v~~~~r~~~~--~~~~~~~~-g--~~~~---~~~~~~~-~~D~vi~~v~-~   67 (263)
T 1yqg_A            1 MNVYFLGG-GNMAAAVAGGLVKQGGY--RIYIANRGAEK--RERLEKEL-G--VETS---ATLPELH-SDDVLILAVK-P   67 (263)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHCSC--EEEEECSSHHH--HHHHHHHT-C--CEEE---SSCCCCC-TTSEEEECSC-H
T ss_pred             CEEEEECc-hHHHHHHHHHHHHCCCC--eEEEECCCHHH--HHHHHHhc-C--CEEe---CCHHHHh-cCCEEEEEeC-c
Confidence            69999999 999999999998877 5  89999997521  11222110 1  2222   2345667 9999999853 1


Q ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCC
Q 018512          122 RKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNS  164 (354)
Q Consensus       122 ~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv~~  164 (354)
                                     ..+.++++.+.. . +.+|+.++|....
T Consensus        68 ---------------~~~~~v~~~l~~-~-~~ivv~~~~g~~~   93 (263)
T 1yqg_A           68 ---------------QDMEAACKNIRT-N-GALVLSVAAGLSV   93 (263)
T ss_dssp             ---------------HHHHHHHTTCCC-T-TCEEEECCTTCCH
T ss_pred             ---------------hhHHHHHHHhcc-C-CCEEEEecCCCCH
Confidence                           123444444544 3 6666666666653

>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9

Probab=97.24  E-value=0.00077  Score=56.05  Aligned_cols=102  Identities=11%  Similarity=0.048  Sum_probs=59.9

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC-chh-HHHHHhcCCCCCeEEEEeCC--CcHHhh-hCCCcEEEE
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN-TPG-VTADISHMDTGAVVRGFLGQ--PQLENA-LTGMDLVII  116 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~-~~g-~~~dl~~~~~~~~v~~~~~~--~d~~~a-l~~aDvVIi  116 (354)
                      ..||.|+|+ |.+|+.++..|...+.  +++++|.++ ... ...+...... ..+.+ ..+  ..+.++ +++||.||+
T Consensus         3 ~~~vlI~G~-G~vG~~la~~L~~~g~--~V~vid~~~~~~~~~~~~~~~~~~-~~i~g-d~~~~~~l~~a~i~~ad~vi~   77 (153)
T 1id1_A            3 KDHFIVCGH-SILAINTILQLNQRGQ--NVTVISNLPEDDIKQLEQRLGDNA-DVIPG-DSNDSSVLKKAGIDRCRAILA   77 (153)
T ss_dssp             CSCEEEECC-SHHHHHHHHHHHHTTC--CEEEEECCCHHHHHHHHHHHCTTC-EEEES-CTTSHHHHHHHTTTTCSEEEE
T ss_pred             CCcEEEECC-CHHHHHHHHHHHHCCC--CEEEEECCChHHHHHHHHhhcCCC-eEEEc-CCCCHHHHHHcChhhCCEEEE
Confidence            458999998 9999999999998887  899999974 211 1111211111 11111 111  123344 899999999


Q ss_pred             cCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEE-ecCCCC
Q 018512          117 PAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNL-ISNPVN  163 (354)
Q Consensus       117 ~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv-~tNPv~  163 (354)
                      +.+.         |  ..|..    ++..+++..|+..++. +.||..
T Consensus        78 ~~~~---------d--~~n~~----~~~~a~~~~~~~~ii~~~~~~~~  110 (153)
T 1id1_A           78 LSDN---------D--ADNAF----VVLSAKDMSSDVKTVLAVSDSKN  110 (153)
T ss_dssp             CSSC---------H--HHHHH----HHHHHHHHTSSSCEEEECSSGGG
T ss_pred             ecCC---------h--HHHHH----HHHHHHHHCCCCEEEEEECCHHH
Confidence            8431         1  33432    3444555667665554 456643

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}

Probab=97.24  E-value=0.00091  Score=61.93  Aligned_cols=147  Identities=15%  Similarity=0.085  Sum_probs=87.0

Q ss_pred             CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc----hhHHHHHhcCCCCCeEEEEe-CCCc---HHh------
Q 018512           41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT----PGVTADISHMDTGAVVRGFL-GQPQ---LEN------  106 (354)
Q Consensus        41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~----~g~~~dl~~~~~~~~v~~~~-~~~d---~~~------  106 (354)
                      +.+++.|+||+|.+|.+++..|+..|.  +|++.|++..    ......+....  ..+..+. +-+|   .++      
T Consensus        48 ~~k~vlVTGas~GIG~aia~~la~~G~--~V~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~  123 (294)
T 3r3s_A           48 KDRKALVTGGDSGIGRAAAIAYAREGA--DVAINYLPAEEEDAQQVKALIEECG--RKAVLLPGDLSDESFARSLVHKAR  123 (294)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC--EEEEECCGGGHHHHHHHHHHHHHTT--CCEEECCCCTTSHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEeCCcchhHHHHHHHHHHHcC--CcEEEEEecCCCHHHHHHHHHHHH
Confidence            346899999999999999999999998  8999998631    11222222222  2222221 1122   112      


Q ss_pred             -hhCCCcEEEEcCCCCCCCC----CC---HHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecCCCCCchHHHHHHHHHhC
Q 018512          107 -ALTGMDLVIIPAGVPRKPG----MT---RDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNSTVPIAAEVFKKAG  177 (354)
Q Consensus       107 -al~~aDvVIi~ag~~~~~g----~~---r~d~~~~n~~~~~~i~~~i~~~~-p~a~viv~tNPv~~~~~~~~~~~~~~~  177 (354)
                       .+...|++|+.||.....+    .+   ....+.-|+.....+.+.+...- ..+.||++|.-...            .
T Consensus       124 ~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~Iv~isS~~~~------------~  191 (294)
T 3r3s_A          124 EALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIITTSSIQAY------------Q  191 (294)
T ss_dssp             HHHTCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCGGGT------------S
T ss_pred             HHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECChhhc------------c
Confidence             2347899999998753221    22   23456778888888888877665 34667776542211            1


Q ss_pred             CCCCCCEEEeccchHHHHHHHHHHHh
Q 018512          178 TYDPKKLLGVTMLDVVRANTFVAEVL  203 (354)
Q Consensus       178 ~~p~~kviG~t~ld~~r~~~~la~~l  203 (354)
                      +.|..-.++.+......+.+.+|..+
T Consensus       192 ~~~~~~~Y~asKaa~~~l~~~la~e~  217 (294)
T 3r3s_A          192 PSPHLLDYAATKAAILNYSRGLAKQV  217 (294)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCchHHHHHHHHHHHHHHHHHHHH
Confidence            22222233333333445667777776

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}

Probab=97.22  E-value=0.001  Score=59.59  Aligned_cols=140  Identities=13%  Similarity=0.108  Sum_probs=78.0

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEE-e--cCCc--hhHHHHHhcCCCCCeEEEEeCCCcHHhh-------hCC
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLY-D--VVNT--PGVTADISHMDTGAVVRGFLGQPQLENA-------LTG  110 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~-D--~~~~--~g~~~dl~~~~~~~~v~~~~~~~d~~~a-------l~~  110 (354)
                      +++.|+||+|.+|..++..|+..|.  +|++. |  ++..  .....++ .   ...+  . ...+.+++       +..
T Consensus         2 k~vlVTGas~gIG~~ia~~l~~~G~--~V~~~~~~~r~~~~~~~~~~~~-~---~~~~--~-~~~~v~~~~~~~~~~~g~   72 (244)
T 1zmo_A            2 VIALVTHARHFAGPAAVEALTQDGY--TVVCHDASFADAAERQRFESEN-P---GTIA--L-AEQKPERLVDATLQHGEA   72 (244)
T ss_dssp             CEEEESSTTSTTHHHHHHHHHHTTC--EEEECCGGGGSHHHHHHHHHHS-T---TEEE--C-CCCCGGGHHHHHGGGSSC
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCC--EEEEecCCcCCHHHHHHHHHHh-C---CCcc--c-CHHHHHHHHHHHHHHcCC
Confidence            4799999999999999999999998  89999 5  7652  2222222 1   1111  1 12233222       347


Q ss_pred             CcEEEEcCCCCCC---C---CCC---HHHHHHHHHHHHHH----HHHHHhhhCCCeEEEEecCCCCCchHHHHHHHHHhC
Q 018512          111 MDLVIIPAGVPRK---P---GMT---RDDLFNINAGIVRT----LCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAG  177 (354)
Q Consensus       111 aDvVIi~ag~~~~---~---g~~---r~d~~~~n~~~~~~----i~~~i~~~~p~a~viv~tNPv~~~~~~~~~~~~~~~  177 (354)
                      .|++|+.||....   .   ..+   ....+..|+.....    +.+.+++. ..+.||++|.-....            
T Consensus        73 iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~-~~g~iv~isS~~~~~------------  139 (244)
T 1zmo_A           73 IDTIVSNDYIPRPMNRLPLEGTSEADIRQMFEALSIFPILLLQSAIAPLRAA-GGASVIFITSSVGKK------------  139 (244)
T ss_dssp             EEEEEECCCCCTTGGGCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-TCEEEEEECCGGGTS------------
T ss_pred             CCEEEECCCcCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCcEEEEECChhhCC------------
Confidence            8999999986543   1   122   22345566554444    44444443 356677765422111            


Q ss_pred             CCCCCCEEEeccchHHHHHHHHHHHhC
Q 018512          178 TYDPKKLLGVTMLDVVRANTFVAEVLG  204 (354)
Q Consensus       178 ~~p~~kviG~t~ld~~r~~~~la~~l~  204 (354)
                      +.|..-.++.+......+.+.++..++
T Consensus       140 ~~~~~~~Y~asK~a~~~~~~~la~e~~  166 (244)
T 1zmo_A          140 PLAYNPLYGPARAATVALVESAAKTLS  166 (244)
T ss_dssp             CCTTCTTHHHHHHHHHHHHHHHHHHHG
T ss_pred             CCCCchHHHHHHHHHHHHHHHHHHHHh
Confidence            233333344443334456666776653

>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}

Probab=97.22  E-value=0.00032  Score=57.84  Aligned_cols=94  Identities=12%  Similarity=0.124  Sum_probs=63.2

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCch--hHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcCC
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP--GVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG  119 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~--g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~ag  119 (354)
                      .+||+|||+ |.+|..++..|...+.  +|+++|++..+  ..+.++.     ..+..   ..+++++++++|+||.+.+
T Consensus        21 ~~~v~iiG~-G~iG~~~a~~l~~~g~--~v~v~~r~~~~~~~~a~~~~-----~~~~~---~~~~~~~~~~~Divi~at~   89 (144)
T 3oj0_A           21 GNKILLVGN-GMLASEIAPYFSYPQY--KVTVAGRNIDHVRAFAEKYE-----YEYVL---INDIDSLIKNNDVIITATS   89 (144)
T ss_dssp             CCEEEEECC-SHHHHHHGGGCCTTTC--EEEEEESCHHHHHHHHHHHT-----CEEEE---CSCHHHHHHTCSEEEECSC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCC--EEEEEcCCHHHHHHHHHHhC-----CceEe---ecCHHHHhcCCCEEEEeCC
Confidence            459999998 9999999998887775  69999997622  2222222     12221   3467788999999999866


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCCc
Q 018512          120 VPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNST  165 (354)
Q Consensus       120 ~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv~~~  165 (354)
                      .+.. -...                  ....+..+++.+++|.++-
T Consensus        90 ~~~~-~~~~------------------~~l~~g~~vid~~~p~~~~  116 (144)
T 3oj0_A           90 SKTP-IVEE------------------RSLMPGKLFIDLGNPPNIE  116 (144)
T ss_dssp             CSSC-SBCG------------------GGCCTTCEEEECCSSCSBC
T ss_pred             CCCc-EeeH------------------HHcCCCCEEEEccCCccCC
Confidence            5421 0110                  1123578888899997654

>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}

Probab=97.22  E-value=0.00032  Score=65.11  Aligned_cols=109  Identities=13%  Similarity=0.124  Sum_probs=68.4

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhh-CCCcEEEEcCCCC
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENAL-TGMDLVIIPAGVP  121 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al-~~aDvVIi~ag~~  121 (354)
                      |||+|||+ |.+|..++..|...|.  +|.++|+++..   .++............   .+..+++ .++|+||++.-..
T Consensus         3 mkI~iiGa-Ga~G~~~a~~L~~~g~--~V~~~~r~~~~---~~~~~~~g~~~~~~~---~~~~~~~~~~~D~vilavk~~   73 (294)
T 3g17_A            3 LSVAIIGP-GAVGTTIAYELQQSLP--HTTLIGRHAKT---ITYYTVPHAPAQDIV---VKGYEDVTNTFDVIIIAVKTH   73 (294)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHHCT--TCEEEESSCEE---EEEESSTTSCCEEEE---EEEGGGCCSCEEEEEECSCGG
T ss_pred             cEEEEECC-CHHHHHHHHHHHHCCC--eEEEEEeccCc---EEEEecCCeecccee---cCchHhcCCCCCEEEEeCCcc
Confidence            79999999 9999999999998886  88999997511   001111111111221   1223555 8999999984211


Q ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecCCCCCchHHHHHHHHHhCCCCCCCEEEe
Q 018512          122 RKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV  187 (354)
Q Consensus       122 ~~~g~~r~d~~~~n~~~~~~i~~~i~~~~-p~a~viv~tNPv~~~~~~~~~~~~~~~~~p~~kviG~  187 (354)
                                      .+.++++.++.+- ++..|+.+.|-++...        .   +|.+++++-
T Consensus        74 ----------------~~~~~l~~l~~~l~~~~~iv~~~nGi~~~~--------~---~~~~~v~~g  113 (294)
T 3g17_A           74 ----------------QLDAVIPHLTYLAHEDTLIILAQNGYGQLE--------H---IPFKNVCQA  113 (294)
T ss_dssp             ----------------GHHHHGGGHHHHEEEEEEEEECCSSCCCGG--------G---CCCSCEEEC
T ss_pred             ----------------CHHHHHHHHHHhhCCCCEEEEeccCcccHh--------h---CCCCcEEEE
Confidence                            1233444444443 5778888889888763        1   677787653

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0

Probab=97.22  E-value=0.0021  Score=59.05  Aligned_cols=77  Identities=14%  Similarity=0.128  Sum_probs=51.9

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCCCCeEEEEe-CCCcH----H-------hh
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQL----E-------NA  107 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~~~~v~~~~-~~~d~----~-------~a  107 (354)
                      .++|.|+||+|.+|.+++..|+..|.  .|++.|++.  ......++.... ...+..+. +-++.    +       +.
T Consensus        12 ~k~vlITGas~GIG~~~a~~L~~~G~--~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dl~~~~~~v~~~~~~~~~~   88 (311)
T 3o26_A           12 RRCAVVTGGNKGIGFEICKQLSSNGI--MVVLTCRDVTKGHEAVEKLKNSN-HENVVFHQLDVTDPIATMSSLADFIKTH   88 (311)
T ss_dssp             CCEEEESSCSSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHTTT-CCSEEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred             CcEEEEecCCchHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcC-CCceEEEEccCCCcHHHHHHHHHHHHHh
Confidence            45799999999999999999999987  899999986  233344554432 12233321 11221    1       12


Q ss_pred             hCCCcEEEEcCCCC
Q 018512          108 LTGMDLVIIPAGVP  121 (354)
Q Consensus       108 l~~aDvVIi~ag~~  121 (354)
                      +...|++|+.||..
T Consensus        89 ~g~iD~lv~nAg~~  102 (311)
T 3o26_A           89 FGKLDILVNNAGVA  102 (311)
T ss_dssp             HSSCCEEEECCCCC
T ss_pred             CCCCCEEEECCccc
Confidence            34899999999875

>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6

Probab=97.21  E-value=0.001  Score=60.36  Aligned_cols=64  Identities=16%  Similarity=0.203  Sum_probs=45.7

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcC
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA  118 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~a  118 (354)
                      |||+|||+ |.+|..++..|...|+  +|+++|+........++.....    .     .+.++++++||+||++.
T Consensus         1 M~I~iIG~-G~mG~~la~~l~~~g~--~V~~~~~~~~~~~~~~~~~~g~----~-----~~~~~~~~~aDvvi~~v   64 (264)
T 1i36_A            1 LRVGFIGF-GEVAQTLASRLRSRGV--EVVTSLEGRSPSTIERARTVGV----T-----ETSEEDVYSCPVVISAV   64 (264)
T ss_dssp             CEEEEESC-SHHHHHHHHHHHHTTC--EEEECCTTCCHHHHHHHHHHTC----E-----ECCHHHHHTSSEEEECS
T ss_pred             CeEEEEec-hHHHHHHHHHHHHCCC--eEEEeCCccCHHHHHHHHHCCC----c-----CCHHHHHhcCCEEEEEC
Confidence            69999999 9999999999998887  8999887322222222322221    1     23467789999999985

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*

Probab=97.21  E-value=0.0027  Score=58.57  Aligned_cols=35  Identities=17%  Similarity=0.093  Sum_probs=31.3

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEe-cCC
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYD-VVN   78 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D-~~~   78 (354)
                      .+++.|+||+|.+|..++..|+..|.  .|++.| ++.
T Consensus         9 ~k~~lVTGas~GIG~aia~~la~~G~--~V~~~~~r~~   44 (291)
T 1e7w_A            9 VPVALVTGAAKRLGRSIAEGLHAEGY--AVCLHYHRSA   44 (291)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHTTC--EEEEEESSCH
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCC--eEEEEcCCCH
Confidence            35799999999999999999999997  899999 765

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=97.20  E-value=0.00082  Score=61.56  Aligned_cols=115  Identities=14%  Similarity=0.168  Sum_probs=67.1

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCC-CCeEEEEe-CCCc---HHhhh------
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDT-GAVVRGFL-GQPQ---LENAL------  108 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~-~~~v~~~~-~~~d---~~~al------  108 (354)
                      .+++.|+||+|.+|..++..|+..|.  +|++.|++.  ......++..... ...+..+. +-+|   .++++      
T Consensus         6 ~k~vlVTGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   83 (280)
T 1xkq_A            6 NKTVIITGSSNGIGRTTAILFAQEGA--NVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQ   83 (280)
T ss_dssp             TCEEEETTCSSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecCCCHHHHHHHHHHHHHh
Confidence            35799999999999999999999997  899999976  2222333433211 01233221 1122   22223      


Q ss_pred             -CCCcEEEEcCCCCCCC-------CCC---HHHHHHHHHHHHHHHHHH----HhhhCCCeEEEEecC
Q 018512          109 -TGMDLVIIPAGVPRKP-------GMT---RDDLFNINAGIVRTLCEG----IAKCCPNATVNLISN  160 (354)
Q Consensus       109 -~~aDvVIi~ag~~~~~-------g~~---r~d~~~~n~~~~~~i~~~----i~~~~p~a~viv~tN  160 (354)
                       ...|+||+.||.....       ..+   ....+..|+.....+.+.    +.+..  +.||++|.
T Consensus        84 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~--g~iv~isS  148 (280)
T 1xkq_A           84 FGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASK--GEIVNVSS  148 (280)
T ss_dssp             HSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEECC
T ss_pred             cCCCCEEEECCCCCCCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHhhcCC--CcEEEecC
Confidence             3789999999865321       112   223445565555444444    43333  66666654

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}

Probab=97.18  E-value=0.0011  Score=62.10  Aligned_cols=149  Identities=14%  Similarity=0.128  Sum_probs=82.2

Q ss_pred             CCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecC----------C--chhHHHHHhcCCCCCeEEEEe-CCCc---
Q 018512           40 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVV----------N--TPGVTADISHMDTGAVVRGFL-GQPQ---  103 (354)
Q Consensus        40 ~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~----------~--~~g~~~dl~~~~~~~~v~~~~-~~~d---  103 (354)
                      -+.+++.|+||+|.+|..++..|+..|.  +|++.|++          .  ......++....  ..+..+. +-+|   
T Consensus        25 l~gk~vlVTGas~GIG~aia~~la~~G~--~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~d~~~  100 (322)
T 3qlj_A           25 VDGRVVIVTGAGGGIGRAHALAFAAEGA--RVVVNDIGVGLDGSPASGGSAAQSVVDEITAAG--GEAVADGSNVADWDQ  100 (322)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTC--EEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTT--CEEEEECCCTTSHHH
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHCCC--EEEEEeCcccccccccccHHHHHHHHHHHHhcC--CcEEEEECCCCCHHH
Confidence            3445799999999999999999999998  99999986          2  222333444322  2233221 1122   


Q ss_pred             HHhhh-------CCCcEEEEcCCCCCCCC---CC---HHHHHHHHHHHHHHHHHH----HhhhC-----CCeEEEEecCC
Q 018512          104 LENAL-------TGMDLVIIPAGVPRKPG---MT---RDDLFNINAGIVRTLCEG----IAKCC-----PNATVNLISNP  161 (354)
Q Consensus       104 ~~~al-------~~aDvVIi~ag~~~~~g---~~---r~d~~~~n~~~~~~i~~~----i~~~~-----p~a~viv~tNP  161 (354)
                      ..+.+       ...|++|+.||......   .+   ....+..|+.....+.+.    +.+..     ..+.||++|.-
T Consensus       101 v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~~~~~g~IV~isS~  180 (322)
T 3qlj_A          101 AAGLIQTAVETFGGLDVLVNNAGIVRDRMIANTSEEEFDAVIAVHLKGHFATMRHAAAYWRGLSKAGKAVDGRIINTSSG  180 (322)
T ss_dssp             HHHHHHHHHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCEEEEEECCH
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHccccCCCCCcEEEEEcCH
Confidence            22223       37899999999754221   22   233456676554444443    33221     13677777631


Q ss_pred             CCCchHHHHHHHHHhCCCCCCCEEEeccchHHHHHHHHHHHhC
Q 018512          162 VNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEVLG  204 (354)
Q Consensus       162 v~~~~~~~~~~~~~~~~~p~~kviG~t~ld~~r~~~~la~~l~  204 (354)
                      ..          ..  +.+..-.++.+......+.+.+|..++
T Consensus       181 ~~----------~~--~~~~~~~Y~asKaal~~l~~~la~e~~  211 (322)
T 3qlj_A          181 AG----------LQ--GSVGQGNYSAAKAGIATLTLVGAAEMG  211 (322)
T ss_dssp             HH----------HH--CBTTCHHHHHHHHHHHHHHHHHHHHHG
T ss_pred             HH----------cc--CCCCCccHHHHHHHHHHHHHHHHHHhc
Confidence            10          01  223222344443334456677777763

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*

Probab=97.17  E-value=0.0012  Score=61.21  Aligned_cols=148  Identities=13%  Similarity=0.094  Sum_probs=85.5

Q ss_pred             CCeEEEEcCCC--chHHHHHHHHHhCCCCcEEEEEecCCc-hhHHHHHhcCCCCCeEEEEeCCCc---HHhhh-------
Q 018512           42 GFKVAILGAAG--GIGQPLAMLMKINPLVSVLHLYDVVNT-PGVTADISHMDTGAVVRGFLGQPQ---LENAL-------  108 (354)
Q Consensus        42 ~~kI~IiGa~G--~vG~~~a~~l~~~~~~~ei~L~D~~~~-~g~~~dl~~~~~~~~v~~~~~~~d---~~~al-------  108 (354)
                      .+++.|+||+|  .+|..++..|+..|.  .|++.|+++. .....++........... .+-+|   .++++       
T Consensus        30 ~k~vlVTGasg~~GIG~~ia~~la~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~-~Dv~d~~~v~~~~~~~~~~~  106 (296)
T 3k31_A           30 GKKGVIIGVANDKSLAWGIAKAVCAQGA--EVALTYLSETFKKRVDPLAESLGVKLTVP-CDVSDAESVDNMFKVLAEEW  106 (296)
T ss_dssp             TCEEEEECCCSTTSHHHHHHHHHHHTTC--EEEEEESSGGGHHHHHHHHHHHTCCEEEE-CCTTCHHHHHHHHHHHHHHH
T ss_pred             CCEEEEEeCCCCCCHHHHHHHHHHHCCC--EEEEEeCChHHHHHHHHHHHhcCCeEEEE-cCCCCHHHHHHHHHHHHHHc
Confidence            45899999976  999999999999998  8999999862 222222211111111111 11122   22222       


Q ss_pred             CCCcEEEEcCCCCCC-----C--CCC---HHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecCCCCCchHHHHHHHHHhC
Q 018512          109 TGMDLVIIPAGVPRK-----P--GMT---RDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNSTVPIAAEVFKKAG  177 (354)
Q Consensus       109 ~~aDvVIi~ag~~~~-----~--g~~---r~d~~~~n~~~~~~i~~~i~~~~-p~a~viv~tNPv~~~~~~~~~~~~~~~  177 (354)
                      ...|++|+.||....     +  ..+   ....+..|+.....+.+.+..+- ..+.|+++|......            
T Consensus       107 g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~IV~isS~~~~~------------  174 (296)
T 3k31_A          107 GSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTNGGSILTLSYYGAEK------------  174 (296)
T ss_dssp             SCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGGTS------------
T ss_pred             CCCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEEehhhcc------------
Confidence            378999999997532     1  122   23456678888888888877654 356777776422111            


Q ss_pred             CCCCCCEEEeccchHHHHHHHHHHHhC
Q 018512          178 TYDPKKLLGVTMLDVVRANTFVAEVLG  204 (354)
Q Consensus       178 ~~p~~kviG~t~ld~~r~~~~la~~l~  204 (354)
                      +.|..-.++.+......+.+.+|..++
T Consensus       175 ~~~~~~~Y~asKaal~~l~~~la~e~~  201 (296)
T 3k31_A          175 VVPHYNVMGVCKAALEASVKYLAVDLG  201 (296)
T ss_dssp             CCTTTTHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCchhhHHHHHHHHHHHHHHHHHHh
Confidence            223223344443334456677777764

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}

Probab=97.17  E-value=0.0018  Score=59.56  Aligned_cols=115  Identities=17%  Similarity=0.065  Sum_probs=73.7

Q ss_pred             CCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEe-CCCc---HHhhhC---CCc
Q 018512           40 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFL-GQPQ---LENALT---GMD  112 (354)
Q Consensus        40 ~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~-~~~d---~~~al~---~aD  112 (354)
                      -+.++|.|+||+|.+|.+++..|+..|.  +|++.|++.....  ++.... ...+..+. +-+|   .+++++   ..|
T Consensus        14 l~gk~vlVTGas~gIG~~~a~~L~~~G~--~V~~~~r~~~~~~--~~~~~~-~~~~~~~~~Dl~d~~~v~~~~~~~~~iD   88 (291)
T 3rd5_A           14 FAQRTVVITGANSGLGAVTARELARRGA--TVIMAVRDTRKGE--AAARTM-AGQVEVRELDLQDLSSVRRFADGVSGAD   88 (291)
T ss_dssp             CTTCEEEEECCSSHHHHHHHHHHHHTTC--EEEEEESCHHHHH--HHHTTS-SSEEEEEECCTTCHHHHHHHHHTCCCEE
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCC--EEEEEECCHHHHH--HHHHHh-cCCeeEEEcCCCCHHHHHHHHHhcCCCC
Confidence            3456899999999999999999999997  8999999752211  111111 12333321 1122   233343   679


Q ss_pred             EEEEcCCCCCCC----CCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecC
Q 018512          113 LVIIPAGVPRKP----GMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISN  160 (354)
Q Consensus       113 vVIi~ag~~~~~----g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tN  160 (354)
                      ++|+.||.....    .......+..|+.....+.+.+.....+ .||++|.
T Consensus        89 ~lv~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~-riv~isS  139 (291)
T 3rd5_A           89 VLINNAGIMAVPYALTVDGFESQIGTNHLGHFALTNLLLPRLTD-RVVTVSS  139 (291)
T ss_dssp             EEEECCCCCSCCCCBCTTSCBHHHHHHTHHHHHHHHHHGGGEEE-EEEEECC
T ss_pred             EEEECCcCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh-heeEeec
Confidence            999999875322    1223456788988888888888776544 4555543

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2

Probab=97.17  E-value=0.0014  Score=59.57  Aligned_cols=115  Identities=17%  Similarity=0.174  Sum_probs=70.7

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCch--hHHHHHhcCCCCCeEEEEe-CCCc---HHhhh-------
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP--GVTADISHMDTGAVVRGFL-GQPQ---LENAL-------  108 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~--g~~~dl~~~~~~~~v~~~~-~~~d---~~~al-------  108 (354)
                      .+++.|+||+|.+|..++..|+..|.  +|++.|+++..  ....++.     ..+..+. +-+|   .++++       
T Consensus         6 ~k~vlITGas~gIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~-----~~~~~~~~D~~~~~~v~~~~~~~~~~~   78 (263)
T 2a4k_A            6 GKTILVTGAASGIGRAALDLFAREGA--SLVAVDREERLLAEAVAALE-----AEAIAVVADVSDPKAVEAVFAEALEEF   78 (263)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHTCC-----SSEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHhc-----CceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            45899999999999999999999997  89999987521  1111111     1222211 1122   22233       


Q ss_pred             CCCcEEEEcCCCCCCC---CCCH---HHHHHHHHHHHHHHHHHHhhhCC-CeEEEEecCCCC
Q 018512          109 TGMDLVIIPAGVPRKP---GMTR---DDLFNINAGIVRTLCEGIAKCCP-NATVNLISNPVN  163 (354)
Q Consensus       109 ~~aDvVIi~ag~~~~~---g~~r---~d~~~~n~~~~~~i~~~i~~~~p-~a~viv~tNPv~  163 (354)
                      ...|++|+.||.....   ..+.   ...+..|+.....+.+.+.++.. .+.||++|....
T Consensus        79 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~  140 (263)
T 2a4k_A           79 GRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVAG  140 (263)
T ss_dssp             SCCCEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCTT
T ss_pred             CCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEecchh
Confidence            3569999999865321   1222   33456787777777777665531 466777765443

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}

Probab=97.16  E-value=0.0038  Score=56.87  Aligned_cols=151  Identities=17%  Similarity=0.138  Sum_probs=82.7

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEE-eCCCc---HHhhh-------CC
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGF-LGQPQ---LENAL-------TG  110 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~-~~~~d---~~~al-------~~  110 (354)
                      .+++.|+||+|.+|..++..|+..|.  +|++.|++...     +..... ..+..+ .+-+|   .++++       ..
T Consensus        16 ~k~vlVTGas~gIG~aia~~l~~~G~--~V~~~~r~~~~-----~~~~~~-~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   87 (266)
T 3p19_A           16 KKLVVITGASSGIGEAIARRFSEEGH--PLLLLARRVER-----LKALNL-PNTLCAQVDVTDKYTFDTAITRAEKIYGP   87 (266)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTC--CEEEEESCHHH-----HHTTCC-TTEEEEECCTTCHHHHHHHHHHHHHHHCS
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCC--EEEEEECCHHH-----HHHhhc-CCceEEEecCCCHHHHHHHHHHHHHHCCC
Confidence            35799999999999999999999997  89999986421     111111 112111 11122   22233       37


Q ss_pred             CcEEEEcCCCCCCC---CCCH---HHHHHHHHHHHHH----HHHHHhhhCCCeEEEEecCCCCCchHHHHHHHHHhCCCC
Q 018512          111 MDLVIIPAGVPRKP---GMTR---DDLFNINAGIVRT----LCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYD  180 (354)
Q Consensus       111 aDvVIi~ag~~~~~---g~~r---~d~~~~n~~~~~~----i~~~i~~~~p~a~viv~tNPv~~~~~~~~~~~~~~~~~p  180 (354)
                      .|++|+.||.....   ..+.   ...+.-|+.....    +.+.+++.. .+.||++|.-...            .+.|
T Consensus        88 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~-~g~IV~isS~~~~------------~~~~  154 (266)
T 3p19_A           88 ADAIVNNAGMMLLGQIDTQEANEWQRMFDVNVLGLLNGMQAVLAPMKARN-CGTIINISSIAGK------------KTFP  154 (266)
T ss_dssp             EEEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCGGGT------------SCCT
T ss_pred             CCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEEcChhhC------------CCCC
Confidence            89999999875322   1222   2345566555444    555555544 4556666532211            1233


Q ss_pred             CCCEEEeccchHHHHHHHHHHHhCCCCCCCcceEE
Q 018512          181 PKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVV  215 (354)
Q Consensus       181 ~~kviG~t~ld~~r~~~~la~~l~v~~~~v~~~v~  215 (354)
                      ..-.++.+......+.+.++..++  +..|++..+
T Consensus       155 ~~~~Y~asK~a~~~~~~~la~e~~--~~gi~vn~v  187 (266)
T 3p19_A          155 DHAAYCGTKFAVHAISENVREEVA--ASNVRVMTI  187 (266)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHG--GGTCEEEEE
T ss_pred             CCchHHHHHHHHHHHHHHHHHHhc--ccCcEEEEE
Confidence            322333333334456677777764  334544333

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2

Probab=97.16  E-value=0.0023  Score=60.22  Aligned_cols=35  Identities=17%  Similarity=0.093  Sum_probs=31.2

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEe-cCC
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYD-VVN   78 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D-~~~   78 (354)
                      .+++.|+||+|.+|..++..|+..|.  +|++.| ++.
T Consensus        46 ~k~~lVTGas~GIG~aia~~La~~G~--~Vv~~~~r~~   81 (328)
T 2qhx_A           46 VPVALVTGAAKRLGRSIAEGLHAEGY--AVCLHYHRSA   81 (328)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHTTC--EEEEEESSCH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCC--EEEEEcCCCH
Confidence            35799999999999999999999997  899999 765

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E

Probab=97.15  E-value=0.001  Score=59.94  Aligned_cols=155  Identities=18%  Similarity=0.218  Sum_probs=84.3

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc--hhHHHHHhcCCCCCeEEE-EeCCCcHHhhh-------CCC
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRG-FLGQPQLENAL-------TGM  111 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~--~g~~~dl~~~~~~~~v~~-~~~~~d~~~al-------~~a  111 (354)
                      .+++.|+||+|.+|.+++..|+..|.  +|++.|+++.  +....++....  ..+.. +....+.++++       ...
T Consensus         9 gk~~lVTGas~gIG~a~a~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~--~~~~~Dv~d~~~v~~~~~~~~~~~g~i   84 (248)
T 3op4_A            9 GKVALVTGASRGIGKAIAELLAERGA--KVIGTATSESGAQAISDYLGDNG--KGMALNVTNPESIEAVLKAITDEFGGV   84 (248)
T ss_dssp             TCEEEESSCSSHHHHHHHHHHHHTTC--EEEEEESSHHHHHHHHHHHGGGE--EEEECCTTCHHHHHHHHHHHHHHHCCC
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHhcccc--eEEEEeCCCHHHHHHHHHHHHHHcCCC
Confidence            45899999999999999999999998  8999998762  22222332210  00110 00111222233       389


Q ss_pred             cEEEEcCCCCCCCC---CCH---HHHHHHHHHHHHHH----HHHHhhhCCCeEEEEecCCCCCchHHHHHHHHHhCCCCC
Q 018512          112 DLVIIPAGVPRKPG---MTR---DDLFNINAGIVRTL----CEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDP  181 (354)
Q Consensus       112 DvVIi~ag~~~~~g---~~r---~d~~~~n~~~~~~i----~~~i~~~~p~a~viv~tNPv~~~~~~~~~~~~~~~~~p~  181 (354)
                      |++|+.||......   .+.   ...+.-|+.....+    .+.+.+. ..+.|+++|.-.           -.. +.|.
T Consensus        85 D~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~-~~g~iv~isS~~-----------~~~-~~~~  151 (248)
T 3op4_A           85 DILVNNAGITRDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKK-RQGRIINVGSVV-----------GTM-GNAG  151 (248)
T ss_dssp             SEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCHH-----------HHH-CCTT
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCCEEEEEcchh-----------hcC-CCCC
Confidence            99999998754321   122   23455565554444    4444443 346666665311           011 3343


Q ss_pred             CCEEEeccchHHHHHHHHHHHhCCCCCCCcceEE
Q 018512          182 KKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVV  215 (354)
Q Consensus       182 ~kviG~t~ld~~r~~~~la~~l~v~~~~v~~~v~  215 (354)
                      .-.++.+...-..+.+.+|..++  +..|++..+
T Consensus       152 ~~~Y~asK~a~~~l~~~la~e~~--~~gi~vn~v  183 (248)
T 3op4_A          152 QANYAAAKAGVIGFTKSMAREVA--SRGVTVNTV  183 (248)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHG--GGTEEEEEE
T ss_pred             ChHHHHHHHHHHHHHHHHHHHHH--HhCeEEEEE
Confidence            33344444344556777777764  334444333

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=97.15  E-value=0.00085  Score=62.28  Aligned_cols=115  Identities=17%  Similarity=0.256  Sum_probs=66.9

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCC-CCeEEEEe-CCCc---HHhhh------
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDT-GAVVRGFL-GQPQ---LENAL------  108 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~-~~~v~~~~-~~~d---~~~al------  108 (354)
                      .+++.|+||+|.+|..++..|+..|.  +|++.|++.  ......++..... ...+..+. +-+|   .++++      
T Consensus        26 ~k~vlVTGas~gIG~aia~~L~~~G~--~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~  103 (297)
T 1xhl_A           26 GKSVIITGSSNGIGRSAAVIFAKEGA--QVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAK  103 (297)
T ss_dssp             TCEEEETTCSSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCCCHHHHHHHHHHHHHh
Confidence            35799999999999999999999998  899999975  2222333432211 00233221 1122   22333      


Q ss_pred             -CCCcEEEEcCCCCCCCC-----CC---HHHHHHHHHHHHHHHH----HHHhhhCCCeEEEEecC
Q 018512          109 -TGMDLVIIPAGVPRKPG-----MT---RDDLFNINAGIVRTLC----EGIAKCCPNATVNLISN  160 (354)
Q Consensus       109 -~~aDvVIi~ag~~~~~g-----~~---r~d~~~~n~~~~~~i~----~~i~~~~p~a~viv~tN  160 (354)
                       ...|+||+.||......     .+   ....+..|+.....+.    +.+.+..  +.||++|.
T Consensus       104 ~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~--g~IV~isS  166 (297)
T 1xhl_A          104 FGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTK--GEIVNVSS  166 (297)
T ss_dssp             HSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT--CEEEEECC
T ss_pred             cCCCCEEEECCCcCcCCCCccccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC--CEEEEEcC
Confidence             37899999998653211     22   2234555655444444    4444332  66776653

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2

Probab=97.15  E-value=0.0036  Score=56.26  Aligned_cols=111  Identities=15%  Similarity=0.180  Sum_probs=67.4

Q ss_pred             CCCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeC-CCcHH---hhhCCCcEE
Q 018512           39 GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLG-QPQLE---NALTGMDLV  114 (354)
Q Consensus        39 ~~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~-~~d~~---~al~~aDvV  114 (354)
                      .-+.++|.|+||+|.+|..++..|+..|.  +|++.|+++  ....++   .   .+..+.+ ..+.+   +.+.+.|+|
T Consensus        16 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~--~V~~~~r~~--~~~~~~---~---~~~~~~D~~~~~~~~~~~~~~iD~l   85 (249)
T 1o5i_A           16 GIRDKGVLVLAASRGIGRAVADVLSQEGA--EVTICARNE--ELLKRS---G---HRYVVCDLRKDLDLLFEKVKEVDIL   85 (249)
T ss_dssp             CCTTCEEEEESCSSHHHHHHHHHHHHTTC--EEEEEESCH--HHHHHT---C---SEEEECCTTTCHHHHHHHSCCCSEE
T ss_pred             ccCCCEEEEECCCCHHHHHHHHHHHHCCC--EEEEEcCCH--HHHHhh---C---CeEEEeeHHHHHHHHHHHhcCCCEE
Confidence            44456899999999999999999999987  899999875  111222   1   1111111 12333   334489999


Q ss_pred             EEcCCCCCCCC---CCH---HHHHHHHHHH----HHHHHHHHhhhCCCeEEEEecC
Q 018512          115 IIPAGVPRKPG---MTR---DDLFNINAGI----VRTLCEGIAKCCPNATVNLISN  160 (354)
Q Consensus       115 Ii~ag~~~~~g---~~r---~d~~~~n~~~----~~~i~~~i~~~~p~a~viv~tN  160 (354)
                      |+.||......   .+.   ...+..|+..    .+.+.+.+++.. .+.||++|.
T Consensus        86 v~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS  140 (249)
T 1o5i_A           86 VLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKG-WGRIVAITS  140 (249)
T ss_dssp             EECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECC
T ss_pred             EECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEEcc
Confidence            99998653211   122   2334455443    555666666554 456666653

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=97.15  E-value=0.0019  Score=57.98  Aligned_cols=113  Identities=20%  Similarity=0.201  Sum_probs=66.3

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCc---HHhhh-------CCC
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQ---LENAL-------TGM  111 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d---~~~al-------~~a  111 (354)
                      .+++.|+||+|.+|..++..|+..|.  +|++.|++....  .++.... ...... .+-+|   .++++       ...
T Consensus         5 ~k~vlVTGas~giG~~ia~~l~~~G~--~V~~~~r~~~~~--~~~~~~~-~~~~~~-~D~~~~~~~~~~~~~~~~~~g~i   78 (245)
T 1uls_A            5 DKAVLITGAAHGIGRATLELFAKEGA--RLVACDIEEGPL--REAAEAV-GAHPVV-MDVADPASVERGFAEALAHLGRL   78 (245)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHHTTC--EEEEEESCHHHH--HHHHHTT-TCEEEE-CCTTCHHHHHHHHHHHHHHHSSC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCC--EEEEEeCCHHHH--HHHHHHc-CCEEEE-ecCCCHHHHHHHHHHHHHHcCCC
Confidence            35899999999999999999999997  899999875211  1111110 111111 11122   22333       358


Q ss_pred             cEEEEcCCCCCCCC---CC---HHHHHHHHHHHHHHHHHHHhhh---CCCeEEEEecC
Q 018512          112 DLVIIPAGVPRKPG---MT---RDDLFNINAGIVRTLCEGIAKC---CPNATVNLISN  160 (354)
Q Consensus       112 DvVIi~ag~~~~~g---~~---r~d~~~~n~~~~~~i~~~i~~~---~p~a~viv~tN  160 (354)
                      |++|+.||......   .+   ....+..|+.....+.+.+.++   ...+.|+++|.
T Consensus        79 d~lvn~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS  136 (245)
T 1uls_A           79 DGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTAS  136 (245)
T ss_dssp             CEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECC
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEcc
Confidence            99999998753211   12   2334566776665555554433   23466777764

>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}

Probab=97.14  E-value=0.0026  Score=63.66  Aligned_cols=99  Identities=13%  Similarity=0.123  Sum_probs=64.8

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhc-CCCCCeEEEEeCCCcHHhhhCC---CcEEEEc
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISH-MDTGAVVRGFLGQPQLENALTG---MDLVIIP  117 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~-~~~~~~v~~~~~~~d~~~al~~---aDvVIi~  117 (354)
                      ..||+|||+ |.+|++++..|+..|+  +|+++|+++...  .++.. ......+.   .+.++++++++   +|+||++
T Consensus        10 ~~~IgvIGl-G~MG~~lA~~La~~G~--~V~v~dr~~~~~--~~l~~~~~~~~gi~---~~~s~~e~v~~l~~aDvVil~   81 (497)
T 2p4q_A           10 SADFGLIGL-AVMGQNLILNAADHGF--TVCAYNRTQSKV--DHFLANEAKGKSII---GATSIEDFISKLKRPRKVMLL   81 (497)
T ss_dssp             CCSEEEECC-SHHHHHHHHHHHHTTC--CEEEECSSSHHH--HHHHHTTTTTSSEE---CCSSHHHHHHTSCSSCEEEEC
T ss_pred             CCCEEEEee-HHHHHHHHHHHHHCCC--EEEEEeCCHHHH--HHHHcccccCCCeE---EeCCHHHHHhcCCCCCEEEEE
Confidence            358999999 9999999999999998  899999986321  22222 10001232   24567777766   9999998


Q ss_pred             CCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecCCCC
Q 018512          118 AGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVN  163 (354)
Q Consensus       118 ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~-p~a~viv~tNPv~  163 (354)
                      ...+               ..++++++.+..+. |+.+||..+|-..
T Consensus        82 Vp~~---------------~~v~~vl~~l~~~l~~g~iIId~s~~~~  113 (497)
T 2p4q_A           82 VKAG---------------APVDALINQIVPLLEKGDIIIDGGNSHF  113 (497)
T ss_dssp             CCSS---------------HHHHHHHHHHGGGCCTTCEEEECSCCCH
T ss_pred             cCCh---------------HHHHHHHHHHHHhCCCCCEEEECCCCCh
Confidence            5322               12344455666555 5677777777543

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2

Probab=97.14  E-value=0.0024  Score=57.40  Aligned_cols=116  Identities=14%  Similarity=0.179  Sum_probs=66.9

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc--hhHHHHHhcCCCCCeEEEEe-CCCc---HHhhh-------
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFL-GQPQ---LENAL-------  108 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~--~g~~~dl~~~~~~~~v~~~~-~~~d---~~~al-------  108 (354)
                      .++|.|+||+|.+|..++..|+..|.  +|+++|++..  .....++.... ...+..+. +-+|   +++++       
T Consensus        14 ~k~vlITGasggiG~~~a~~l~~~G~--~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   90 (265)
T 1h5q_A           14 NKTIIVTGGNRGIGLAFTRAVAAAGA--NVAVIYRSAADAVEVTEKVGKEF-GVKTKAYQCDVSNTDIVTKTIQQIDADL   90 (265)
T ss_dssp             TEEEEEETTTSHHHHHHHHHHHHTTE--EEEEEESSCTTHHHHHHHHHHHH-TCCEEEEECCTTCHHHHHHHHHHHHHHS
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCC--eEEEEeCcchhhHHHHHHHHHhc-CCeeEEEEeeCCCHHHHHHHHHHHHHhc
Confidence            45899999999999999999999987  8999998652  22222332110 11222221 1122   22222       


Q ss_pred             CCCcEEEEcCCCCCCCC---CC---HHHHHHHHHHHHHHHHHHH----hhhCCCeEEEEecC
Q 018512          109 TGMDLVIIPAGVPRKPG---MT---RDDLFNINAGIVRTLCEGI----AKCCPNATVNLISN  160 (354)
Q Consensus       109 ~~aDvVIi~ag~~~~~g---~~---r~d~~~~n~~~~~~i~~~i----~~~~p~a~viv~tN  160 (354)
                      ...|+||+.||......   .+   ....+..|+.....+.+.+    .+....+.||++|.
T Consensus        91 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~~sS  152 (265)
T 1h5q_A           91 GPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSS  152 (265)
T ss_dssp             CSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECC
T ss_pred             CCCCEEEECCCcCCCCchhhCCHHHHHHHHhhhhHhHHHHHHHHHHHHHhcCCCceEEEeCC
Confidence            35899999998753211   12   2234556665555555444    33343466666654

>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*

Probab=97.14  E-value=0.0023  Score=63.76  Aligned_cols=98  Identities=17%  Similarity=0.165  Sum_probs=61.7

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhc-CCCCCeEEEEeCCCcHHhhh---CCCcEEEEcC
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISH-MDTGAVVRGFLGQPQLENAL---TGMDLVIIPA  118 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~-~~~~~~v~~~~~~~d~~~al---~~aDvVIi~a  118 (354)
                      |||+|||+ |.+|++++..|...|+  +|.++|+++...  .++.. ......+..   +.++++++   +++|+||++.
T Consensus         3 m~IgvIG~-G~mG~~lA~~La~~G~--~V~v~dr~~~~~--~~l~~~~~~g~gi~~---~~~~~e~v~~l~~aDvVilaV   74 (482)
T 2pgd_A            3 ADIALIGL-AVMGQNLILNMNDHGF--VVCAFNRTVSKV--DDFLANEAKGTKVLG---AHSLEEMVSKLKKPRRIILLV   74 (482)
T ss_dssp             BSEEEECC-SHHHHHHHHHHHHTTC--CEEEECSSTHHH--HHHHHTTTTTSSCEE---CSSHHHHHHHBCSSCEEEECS
T ss_pred             CeEEEECh-HHHHHHHHHHHHHCCC--eEEEEeCCHHHH--HHHHhccccCCCeEE---eCCHHHHHhhccCCCEEEEeC
Confidence            78999999 9999999999999887  899999976221  12221 000011332   34666665   5999999985


Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecCCCC
Q 018512          119 GVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVN  163 (354)
Q Consensus       119 g~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~-p~a~viv~tNPv~  163 (354)
                      ..+               ..+.++++.+..+. |+.+||..+|-..
T Consensus        75 p~~---------------~~v~~vl~~l~~~l~~g~iII~~s~~~~  105 (482)
T 2pgd_A           75 KAG---------------QAVDNFIEKLVPLLDIGDIIIDGGNSEY  105 (482)
T ss_dssp             CTT---------------HHHHHHHHHHHHHCCTTCEEEECSCCCH
T ss_pred             CCh---------------HHHHHHHHHHHhhcCCCCEEEECCCCCH
Confidence            322               01223334444443 5667777777554

>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}

Probab=97.13  E-value=0.00094  Score=62.02  Aligned_cols=98  Identities=12%  Similarity=0.122  Sum_probs=61.1

Q ss_pred             CCCeEEEEcCCCchHHHHHHHHHhC-----C-CCcEEEEEecCCchhHHHHHhc-CCC---C--C-----eEEEEeCCCc
Q 018512           41 AGFKVAILGAAGGIGQPLAMLMKIN-----P-LVSVLHLYDVVNTPGVTADISH-MDT---G--A-----VVRGFLGQPQ  103 (354)
Q Consensus        41 ~~~kI~IiGa~G~vG~~~a~~l~~~-----~-~~~ei~L~D~~~~~g~~~dl~~-~~~---~--~-----~v~~~~~~~d  103 (354)
                      .+|||+|||+ |.+|+.++..|...     | +  +|.++|+ +  .....+.. ...   .  .     .+..   +++
T Consensus         7 ~~m~I~iiG~-G~mG~~~a~~L~~~~~~~~g~~--~V~~~~r-~--~~~~~l~~~~g~~~~~~~~~~~~~~~~~---~~~   77 (317)
T 2qyt_A            7 QPIKIAVFGL-GGVGGYYGAMLALRAAATDGLL--EVSWIAR-G--AHLEAIRAAGGLRVVTPSRDFLARPTCV---TDN   77 (317)
T ss_dssp             CCEEEEEECC-SHHHHHHHHHHHHHHHHTTSSE--EEEEECC-H--HHHHHHHHHTSEEEECSSCEEEECCSEE---ESC
T ss_pred             CCCEEEEECc-CHHHHHHHHHHHhCccccCCCC--CEEEEEc-H--HHHHHHHhcCCeEEEeCCCCeEEecceE---ecC
Confidence            4579999999 99999999999887     7 6  8999998 4  12222322 110   0  0     0111   123


Q ss_pred             HHhhhCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecCCCCC
Q 018512          104 LENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNS  164 (354)
Q Consensus       104 ~~~al~~aDvVIi~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~-p~a~viv~tNPv~~  164 (354)
                       .++++++|+||++.....                +.++++.+..+- ++..|+.++|..+.
T Consensus        78 -~~~~~~~D~vil~vk~~~----------------~~~v~~~i~~~l~~~~~iv~~~nG~~~  122 (317)
T 2qyt_A           78 -PAEVGTVDYILFCTKDYD----------------MERGVAEIRPMIGQNTKILPLLNGADI  122 (317)
T ss_dssp             -HHHHCCEEEEEECCSSSC----------------HHHHHHHHGGGEEEEEEEEECSCSSSH
T ss_pred             -ccccCCCCEEEEecCccc----------------HHHHHHHHHhhcCCCCEEEEccCCCCc
Confidence             356789999999853321                233445555443 56677777886644

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}

Probab=97.13  E-value=0.0019  Score=58.79  Aligned_cols=114  Identities=15%  Similarity=0.182  Sum_probs=65.2

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC---chhHHHHHhcCCCCCeEEEEe-CCCc---HHhhh-------
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN---TPGVTADISHMDTGAVVRGFL-GQPQ---LENAL-------  108 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~---~~g~~~dl~~~~~~~~v~~~~-~~~d---~~~al-------  108 (354)
                      ++|.|+||+|.+|.+++..|+..|.  +|++.+...   .+....++....  ..+..+. +-+|   .++++       
T Consensus        27 k~vlITGas~gIG~a~a~~l~~~G~--~V~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~v~~~~~~~~~~~  102 (272)
T 4e3z_A           27 PVVLVTGGSRGIGAAVCRLAARQGW--RVGVNYAANREAADAVVAAITESG--GEAVAIPGDVGNAADIAAMFSAVDRQF  102 (272)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHTTC--EEEEEESSCHHHHHHHHHHHHHTT--CEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCC--EEEEEcCCChhHHHHHHHHHHhcC--CcEEEEEcCCCCHHHHHHHHHHHHHhC
Confidence            3799999999999999999999998  787764433   222223333322  2333321 1122   22222       


Q ss_pred             CCCcEEEEcCCCCCCCC----CCH---HHHHHHHHHHHHH----HHHHHhhh--CCCeEEEEecC
Q 018512          109 TGMDLVIIPAGVPRKPG----MTR---DDLFNINAGIVRT----LCEGIAKC--CPNATVNLISN  160 (354)
Q Consensus       109 ~~aDvVIi~ag~~~~~g----~~r---~d~~~~n~~~~~~----i~~~i~~~--~p~a~viv~tN  160 (354)
                      ...|+||+.||.....+    .+.   ...+..|+.....    +.+.+.+.  ...+.||++|.
T Consensus       103 g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS  167 (272)
T 4e3z_A          103 GRLDGLVNNAGIVDYPQRVDEMSVERIERMLRVNVTGSILCAAEAVRRMSRLYSGQGGAIVNVSS  167 (272)
T ss_dssp             SCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECC
T ss_pred             CCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhccCCCCEEEEEcc
Confidence            37899999998754322    122   3345566554444    44444442  23566777654

>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A

Probab=97.12  E-value=0.00064  Score=61.54  Aligned_cols=66  Identities=18%  Similarity=0.277  Sum_probs=47.3

Q ss_pred             CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcC-CCCCeEEEEeCCCcHHhhhCCCcEEEEcC
Q 018512           41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHM-DTGAVVRGFLGQPQLENALTGMDLVIIPA  118 (354)
Q Consensus        41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~-~~~~~v~~~~~~~d~~~al~~aDvVIi~a  118 (354)
                      .+|||+|||+ |.+|..++..|...+.  +|.++|+++...  .++... .    +.   ...++.++++++|+||++.
T Consensus         2 ~~m~i~iiG~-G~mG~~~a~~l~~~g~--~v~~~~~~~~~~--~~~~~~~g----~~---~~~~~~~~~~~~D~Vi~~v   68 (259)
T 2ahr_A            2 NAMKIGIIGV-GKMASAIIKGLKQTPH--ELIISGSSLERS--KEIAEQLA----LP---YAMSHQDLIDQVDLVILGI   68 (259)
T ss_dssp             -CCEEEEECC-SHHHHHHHHHHTTSSC--EEEEECSSHHHH--HHHHHHHT----CC---BCSSHHHHHHTCSEEEECS
T ss_pred             CccEEEEECC-CHHHHHHHHHHHhCCC--eEEEECCCHHHH--HHHHHHcC----CE---eeCCHHHHHhcCCEEEEEe
Confidence            4589999998 9999999999988775  899999875211  112211 1    11   1246678889999999985

>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}

Probab=97.12  E-value=0.0011  Score=54.14  Aligned_cols=70  Identities=13%  Similarity=0.158  Sum_probs=45.8

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcH---Hh-hhCCCcEEEEc
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQL---EN-ALTGMDLVIIP  117 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~---~~-al~~aDvVIi~  117 (354)
                      +++|+|+|+ |.+|+.++..|...|.  +|+++|.++..  ...+.+... ..+.+  +.++.   .+ .+.++|+||++
T Consensus         6 ~~~v~I~G~-G~iG~~la~~L~~~g~--~V~~id~~~~~--~~~~~~~~~-~~~~g--d~~~~~~l~~~~~~~~d~vi~~   77 (141)
T 3llv_A            6 RYEYIVIGS-EAAGVGLVRELTAAGK--KVLAVDKSKEK--IELLEDEGF-DAVIA--DPTDESFYRSLDLEGVSAVLIT   77 (141)
T ss_dssp             CCSEEEECC-SHHHHHHHHHHHHTTC--CEEEEESCHHH--HHHHHHTTC-EEEEC--CTTCHHHHHHSCCTTCSEEEEC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCC--eEEEEECCHHH--HHHHHHCCC-cEEEC--CCCCHHHHHhCCcccCCEEEEe
Confidence            458999999 9999999999999888  89999997621  122222221 11111  12232   22 24789999998


Q ss_pred             CC
Q 018512          118 AG  119 (354)
Q Consensus       118 ag  119 (354)
                      .+
T Consensus        78 ~~   79 (141)
T 3llv_A           78 GS   79 (141)
T ss_dssp             CS
T ss_pred             cC
Confidence            54

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}

Probab=97.12  E-value=0.0011  Score=59.98  Aligned_cols=111  Identities=19%  Similarity=0.196  Sum_probs=65.9

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEE-EeCCCcHHhh-------hCCCcE
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRG-FLGQPQLENA-------LTGMDL  113 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~-~~~~~d~~~a-------l~~aDv  113 (354)
                      .++|.|+||+|.+|..++..|+..|.  +|++.|++...     +...   ..+.. +....+.+++       +...|+
T Consensus        21 ~k~vlVTGas~gIG~aia~~l~~~G~--~V~~~~r~~~~-----~~~~---~~~~~Dl~d~~~v~~~~~~~~~~~g~iD~   90 (253)
T 2nm0_A           21 SRSVLVTGGNRGIGLAIARAFADAGD--KVAITYRSGEP-----PEGF---LAVKCDITDTEQVEQAYKEIEETHGPVEV   90 (253)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESSSCC-----CTTS---EEEECCTTSHHHHHHHHHHHHHHTCSCSE
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCC--EEEEEeCChHh-----hccc---eEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            45899999999999999999999997  89999987521     0100   00110 0000112222       335799


Q ss_pred             EEEcCCCCCCC------CCCHHHHHHHHHHHHHHHHH----HHhhhCCCeEEEEecCCCC
Q 018512          114 VIIPAGVPRKP------GMTRDDLFNINAGIVRTLCE----GIAKCCPNATVNLISNPVN  163 (354)
Q Consensus       114 VIi~ag~~~~~------g~~r~d~~~~n~~~~~~i~~----~i~~~~p~a~viv~tNPv~  163 (354)
                      +|+.||.....      .......+..|+.....+.+    .+++. ..+.||++|.-..
T Consensus        91 lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~-~~g~iv~isS~~~  149 (253)
T 2nm0_A           91 LIANAGVTKDQLLMRMSEEDFTSVVETNLTGTFRVVKRANRAMLRA-KKGRVVLISSVVG  149 (253)
T ss_dssp             EEEECSCCTTTC---CCTTTTHHHHHHHHHHHHHHHHHHHHHHHHH-TCEEEEEECCCCC
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCEEEEECchhh
Confidence            99999865321      12334556667665555544    44433 3566777765443

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=97.12  E-value=0.00081  Score=59.60  Aligned_cols=96  Identities=17%  Similarity=0.169  Sum_probs=59.6

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEE-EeCCCcHHhhhC------CCcEEE
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRG-FLGQPQLENALT------GMDLVI  115 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~-~~~~~d~~~al~------~aDvVI  115 (354)
                      ++|.|+||+|.+|..++..|+..|.  +|+++|++..      ....   ..+.. +....++.++++      +.|+||
T Consensus         3 k~vlVtGasggiG~~la~~l~~~G~--~V~~~~r~~~------~~~~---~~~~~D~~~~~~~~~~~~~~~~~~~~d~li   71 (242)
T 1uay_A            3 RSALVTGGASGLGRAAALALKARGY--RVVVLDLRRE------GEDL---IYVEGDVTREEDVRRAVARAQEEAPLFAVV   71 (242)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHTC--EEEEEESSCC------SSSS---EEEECCTTCHHHHHHHHHHHHHHSCEEEEE
T ss_pred             CEEEEeCCCChHHHHHHHHHHHCCC--EEEEEccCcc------ccce---EEEeCCCCCHHHHHHHHHHHHhhCCceEEE
Confidence            5899999999999999999999887  8999998752      1110   00110 001112334444      789999


Q ss_pred             EcCCCCCCCC---C-------CHHHHHHHHHHHHHHHHHHHhhh
Q 018512          116 IPAGVPRKPG---M-------TRDDLFNINAGIVRTLCEGIAKC  149 (354)
Q Consensus       116 i~ag~~~~~g---~-------~r~d~~~~n~~~~~~i~~~i~~~  149 (354)
                      ++||......   .       ...+.+..|+.....+.+.+.+.
T Consensus        72 ~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~  115 (242)
T 1uay_A           72 SAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWA  115 (242)
T ss_dssp             ECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred             EcccccCcccccccccccchHHHHHHHHHHhHHHHHHHHHHHHH
Confidence            9998653221   1       22345566766666666555443

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}

Probab=97.12  E-value=0.0042  Score=56.42  Aligned_cols=146  Identities=11%  Similarity=0.108  Sum_probs=79.7

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc---hhHHHHHhcCCCCCeEEEEe-CCCc---HHhhh------
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT---PGVTADISHMDTGAVVRGFL-GQPQ---LENAL------  108 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~---~g~~~dl~~~~~~~~v~~~~-~~~d---~~~al------  108 (354)
                      .+++.|+||+|.+|..++..|+..|.  .|++.|.+..   .....++....  ..+..+. +-+|   .++++      
T Consensus        25 ~k~vlITGas~gIG~~~a~~l~~~G~--~v~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~v~~~~~~~~~~  100 (269)
T 3gk3_A           25 KRVAFVTGGMGGLGAAISRRLHDAGM--AVAVSHSERNDHVSTWLMHERDAG--RDFKAYAVDVADFESCERCAEKVLAD  100 (269)
T ss_dssp             CCEEEETTTTSHHHHHHHHHHHTTTC--EEEEEECSCHHHHHHHHHHHHTTT--CCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCC--EEEEEcCCchHHHHHHHHHHHhcC--CceEEEEecCCCHHHHHHHHHHHHHH
Confidence            34688999999999999999999988  8999996551   22222333322  2222211 1122   22222      


Q ss_pred             -CCCcEEEEcCCCCCCC---CCCH---HHHHHHHHHHHHHHHH----HHhhhCCCeEEEEecCCCCCchHHHHHHHHHhC
Q 018512          109 -TGMDLVIIPAGVPRKP---GMTR---DDLFNINAGIVRTLCE----GIAKCCPNATVNLISNPVNSTVPIAAEVFKKAG  177 (354)
Q Consensus       109 -~~aDvVIi~ag~~~~~---g~~r---~d~~~~n~~~~~~i~~----~i~~~~p~a~viv~tNPv~~~~~~~~~~~~~~~  177 (354)
                       ...|++|+.||.....   ..+.   ...+..|+.....+.+    .+.+. ..+.|+++|...           -.. 
T Consensus       101 ~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~~g~iv~isS~~-----------~~~-  167 (269)
T 3gk3_A          101 FGKVDVLINNAGITRDATFMKMTKGDWDAVMRTDLDAMFNVTKQFIAGMVER-RFGRIVNIGSVN-----------GSR-  167 (269)
T ss_dssp             HSCCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCHH-----------HHH-
T ss_pred             cCCCCEEEECCCcCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCCEEEEeCChh-----------hcc-
Confidence             3799999999875322   1222   2345556555444444    44433 346677666411           011 


Q ss_pred             CCCCCCEEEeccchHHHHHHHHHHHhC
Q 018512          178 TYDPKKLLGVTMLDVVRANTFVAEVLG  204 (354)
Q Consensus       178 ~~p~~kviG~t~ld~~r~~~~la~~l~  204 (354)
                      +.+..-.++.+......+.+.++..++
T Consensus       168 ~~~~~~~Y~asKaa~~~~~~~la~e~~  194 (269)
T 3gk3_A          168 GAFGQANYASAKAGIHGFTKTLALETA  194 (269)
T ss_dssp             CCTTBHHHHHHHHHHHHHHHHHHHHHG
T ss_pred             CCCCcchHHHHHHHHHHHHHHHHHHhh
Confidence            233333344443334456667777663

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A

Probab=97.11  E-value=0.00058  Score=61.47  Aligned_cols=111  Identities=14%  Similarity=0.130  Sum_probs=63.9

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEE-EeCCCcHHhh-------hCCCcE
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRG-FLGQPQLENA-------LTGMDL  113 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~-~~~~~d~~~a-------l~~aDv  113 (354)
                      .++|.|+||+|.+|..++..|+..|.  +|++.|++....     ....   .+.. +....+.+++       +...|+
T Consensus        15 ~k~vlVTGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~-----~~~~---~~~~D~~~~~~~~~~~~~~~~~~g~id~   84 (247)
T 1uzm_A           15 SRSVLVTGGNRGIGLAIAQRLAADGH--KVAVTHRGSGAP-----KGLF---GVEVDVTDSDAVDRAFTAVEEHQGPVEV   84 (247)
T ss_dssp             CCEEEETTTTSHHHHHHHHHHHHTTC--EEEEEESSSCCC-----TTSE---EEECCTTCHHHHHHHHHHHHHHHSSCSE
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCC--EEEEEeCChHHH-----HHhc---CeeccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            45899999999999999999999987  899999875210     0000   0110 0000112222       346799


Q ss_pred             EEEcCCCCCCC---CCC---HHHHHHHHHHHHHHHHHHHhhh---CCCeEEEEecCCC
Q 018512          114 VIIPAGVPRKP---GMT---RDDLFNINAGIVRTLCEGIAKC---CPNATVNLISNPV  162 (354)
Q Consensus       114 VIi~ag~~~~~---g~~---r~d~~~~n~~~~~~i~~~i~~~---~p~a~viv~tNPv  162 (354)
                      +|+.||.....   ..+   ....+..|+.....+.+.+.++   ...+.||++|...
T Consensus        85 lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~  142 (247)
T 1uzm_A           85 LVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVS  142 (247)
T ss_dssp             EEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEECCHh
Confidence            99999875321   122   2334556665554444444322   2346677776543

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*

Probab=97.11  E-value=0.0022  Score=57.79  Aligned_cols=151  Identities=15%  Similarity=0.166  Sum_probs=82.2

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc--hhHHHHHhcCCCCCeEEEEe-CCCc---HHhhh-------C
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFL-GQPQ---LENAL-------T  109 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~--~g~~~dl~~~~~~~~v~~~~-~~~d---~~~al-------~  109 (354)
                      +++.|+||+|.+|..++..|+..|.  +|++.|++..  .....++..     .+..+. +-+|   .++++       .
T Consensus         1 k~vlVTGas~gIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~-----~~~~~~~Dv~~~~~v~~~~~~~~~~~g   73 (248)
T 3asu_A            1 MIVLVTGATAGFGECITRRFIQQGH--KVIATGRRQERLQELKDELGD-----NLYIAQLDVRNRAAIEEMLASLPAEWC   73 (248)
T ss_dssp             CEEEETTTTSTTHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHCT-----TEEEEECCTTCHHHHHHHHHTSCTTTC
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHhcC-----ceEEEEcCCCCHHHHHHHHHHHHHhCC
Confidence            4789999999999999999999997  8999998752  222222321     122111 1122   22333       3


Q ss_pred             CCcEEEEcCCCCCC--C--CCCH---HHHHHHHHHH----HHHHHHHHhhhCCCeEEEEecCCCCCchHHHHHHHHHhCC
Q 018512          110 GMDLVIIPAGVPRK--P--GMTR---DDLFNINAGI----VRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGT  178 (354)
Q Consensus       110 ~aDvVIi~ag~~~~--~--g~~r---~d~~~~n~~~----~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~~~~~~~~~  178 (354)
                      ..|++|+.||....  +  ..+.   ...+..|+..    .+.+.+.+++.. .+.||++|.....            .+
T Consensus        74 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~------------~~  140 (248)
T 3asu_A           74 NIDILVNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERN-HGHIINIGSTAGS------------WP  140 (248)
T ss_dssp             CCCEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCGGGT------------SC
T ss_pred             CCCEEEECCCcCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CceEEEEccchhc------------cC
Confidence            78999999987531  1  1222   2345556544    445555554443 4566666542211            12


Q ss_pred             CCCCCEEEeccchHHHHHHHHHHHhCCCCCCCcceEE
Q 018512          179 YDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVV  215 (354)
Q Consensus       179 ~p~~kviG~t~ld~~r~~~~la~~l~v~~~~v~~~v~  215 (354)
                      .|..-.++.+......+.+.++..++  +..|++..+
T Consensus       141 ~~~~~~Y~asKaa~~~~~~~la~e~~--~~gi~v~~v  175 (248)
T 3asu_A          141 YAGGNVYGATKAFVRQFSLNLRTDLH--GTAVRVTDI  175 (248)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHTT--TSCCEEEEE
T ss_pred             CCCCchHHHHHHHHHHHHHHHHHHhh--hcCcEEEEE
Confidence            23222333333334456666777653  445544443

>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*

Probab=97.10  E-value=0.0042  Score=56.25  Aligned_cols=146  Identities=14%  Similarity=0.111  Sum_probs=81.1

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC---chhHHHHHhcCCCCCeEEEEe-CCCc---HHhhh-------
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN---TPGVTADISHMDTGAVVRGFL-GQPQ---LENAL-------  108 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~---~~g~~~dl~~~~~~~~v~~~~-~~~d---~~~al-------  108 (354)
                      ++|.|+||+|.+|..++..|+..|.  +|++.+...   ......++....  ..+..+. +-+|   .++++       
T Consensus        27 k~vlVTGas~gIG~~la~~l~~~G~--~v~i~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~~~~  102 (267)
T 4iiu_A           27 RSVLVTGASKGIGRAIARQLAADGF--NIGVHYHRDAAGAQETLNAIVANG--GNGRLLSFDVANREQCREVLEHEIAQH  102 (267)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHTTC--EEEEEESSCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCC--EEEEEeCCchHHHHHHHHHHHhcC--CceEEEEecCCCHHHHHHHHHHHHHHh
Confidence            4799999999999999999999997  776655443   222233343322  2222221 1122   22233       


Q ss_pred             CCCcEEEEcCCCCCCCC---CC---HHHHHHHHHHHHHHHHH----HHhhhCCCeEEEEecCCCCCchHHHHHHHHHhCC
Q 018512          109 TGMDLVIIPAGVPRKPG---MT---RDDLFNINAGIVRTLCE----GIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGT  178 (354)
Q Consensus       109 ~~aDvVIi~ag~~~~~g---~~---r~d~~~~n~~~~~~i~~----~i~~~~p~a~viv~tNPv~~~~~~~~~~~~~~~~  178 (354)
                      ...|+||+.||......   .+   ....+..|+.....+.+    .+.+....+.||++|....           . .+
T Consensus       103 g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~-----------~-~~  170 (267)
T 4iiu_A          103 GAWYGVVSNAGIARDAAFPALSNDDWDAVIHTNLDSFYNVIQPCIMPMIGARQGGRIITLSSVSG-----------V-MG  170 (267)
T ss_dssp             CCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCHHH-----------H-HC
T ss_pred             CCccEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcchHh-----------c-cC
Confidence            38999999998754321   12   23345566555444444    4443456777777764110           1 12


Q ss_pred             CCCCCEEEeccchHHHHHHHHHHHhC
Q 018512          179 YDPKKLLGVTMLDVVRANTFVAEVLG  204 (354)
Q Consensus       179 ~p~~kviG~t~ld~~r~~~~la~~l~  204 (354)
                      .|..-.++.+......+.+.++..+.
T Consensus       171 ~~~~~~Y~asKaa~~~~~~~la~e~~  196 (267)
T 4iiu_A          171 NRGQVNYSAAKAGIIGATKALAIELA  196 (267)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHHG
T ss_pred             CCCCchhHHHHHHHHHHHHHHHHHHh
Confidence            33333344443334456667777763

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}

Probab=97.10  E-value=0.0042  Score=57.32  Aligned_cols=158  Identities=15%  Similarity=0.113  Sum_probs=85.2

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCC-CcEEEEEecCC--chhHHHHHhcCCCCCeEEEEe-C---CCcHHhhh------
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPL-VSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-G---QPQLENAL------  108 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~-~~ei~L~D~~~--~~g~~~dl~~~~~~~~v~~~~-~---~~d~~~al------  108 (354)
                      .+++.|+||+|.+|..++..|+..|. ...|++.|++.  ......++........+..+. +   ..+.++++      
T Consensus        33 ~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~  112 (287)
T 3rku_A           33 KKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQAEKIKPFIENLPQE  112 (287)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTTCGGGHHHHHHTSCGG
T ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHHh
Confidence            35899999999999999999988764 23899999876  222333333211112232221 1   12233333      


Q ss_pred             -CCCcEEEEcCCCCCCC----CCCH---HHHHHHHHHHHHHH----HHHHhhhCCCeEEEEecCCCCCchHHHHHHHHHh
Q 018512          109 -TGMDLVIIPAGVPRKP----GMTR---DDLFNINAGIVRTL----CEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKA  176 (354)
Q Consensus       109 -~~aDvVIi~ag~~~~~----g~~r---~d~~~~n~~~~~~i----~~~i~~~~p~a~viv~tNPv~~~~~~~~~~~~~~  176 (354)
                       ...|++|..||.....    ..+.   ...+.-|+.....+    .+.+++.. .+.||++|.-...            
T Consensus       113 ~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~IV~isS~~~~------------  179 (287)
T 3rku_A          113 FKDIDILVNNAGKALGSDRVGQIATEDIQDVFDTNVTALINITQAVLPIFQAKN-SGDIVNLGSIAGR------------  179 (287)
T ss_dssp             GCSCCEEEECCCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCGGGT------------
T ss_pred             cCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCeEEEECChhhc------------
Confidence             3689999999965321    1222   33455565554444    44445443 4566666532211            


Q ss_pred             CCCCCCCEEEeccchHHHHHHHHHHHhCCCCCCCcceE
Q 018512          177 GTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPV  214 (354)
Q Consensus       177 ~~~p~~kviG~t~ld~~r~~~~la~~l~v~~~~v~~~v  214 (354)
                      .+.|..-.++.+......+.+.+|..++  +..|++..
T Consensus       180 ~~~~~~~~Y~asKaa~~~l~~~la~e~~--~~gIrvn~  215 (287)
T 3rku_A          180 DAYPTGSIYCASKFAVGAFTDSLRKELI--NTKIRVIL  215 (287)
T ss_dssp             SCCTTCHHHHHHHHHHHHHHHHHHHHTT--TSSCEEEE
T ss_pred             CCCCCCchHHHHHHHHHHHHHHHHHHhh--hcCCEEEE
Confidence            1233322333443334556777777764  44454433

>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*

Probab=97.10  E-value=0.00082  Score=61.97  Aligned_cols=64  Identities=19%  Similarity=0.298  Sum_probs=47.9

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcC
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA  118 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~a  118 (354)
                      |||+|||+ |.+|..++..|...++  +|+++|+++..  ...+....    +..   +.++.++++++|+||++.
T Consensus         1 m~i~iiG~-G~mG~~~a~~l~~~g~--~V~~~~~~~~~--~~~~~~~g----~~~---~~~~~~~~~~~Dvvi~~v   64 (296)
T 2gf2_A            1 MPVGFIGL-GNMGNPMAKNLMKHGY--PLIIYDVFPDA--CKEFQDAG----EQV---VSSPADVAEKADRIITML   64 (296)
T ss_dssp             CCEEEECC-STTHHHHHHHHHHTTC--CEEEECSSTHH--HHHHHTTT----CEE---CSSHHHHHHHCSEEEECC
T ss_pred             CeEEEEec-cHHHHHHHHHHHHCCC--EEEEEeCCHHH--HHHHHHcC----Cee---cCCHHHHHhcCCEEEEeC
Confidence            68999999 9999999999998887  89999997622  12233221    222   245678889999999984

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*

Probab=97.09  E-value=0.001  Score=60.82  Aligned_cols=116  Identities=16%  Similarity=0.119  Sum_probs=71.3

Q ss_pred             CCeEEEEcCC--CchHHHHHHHHHhCCCCcEEEEEecCCc-hhHHHHHhcCCCCCeEEEEeCCCc---HHhhh-------
Q 018512           42 GFKVAILGAA--GGIGQPLAMLMKINPLVSVLHLYDVVNT-PGVTADISHMDTGAVVRGFLGQPQ---LENAL-------  108 (354)
Q Consensus        42 ~~kI~IiGa~--G~vG~~~a~~l~~~~~~~ei~L~D~~~~-~g~~~dl~~~~~~~~v~~~~~~~d---~~~al-------  108 (354)
                      .+++.|+||+  |.+|..++..|+..|.  +|++.|++.. .....++........... .+-+|   .++++       
T Consensus         6 ~k~vlVTGas~~~gIG~~~a~~l~~~G~--~V~~~~r~~~~~~~~~~l~~~~~~~~~~~-~D~~~~~~v~~~~~~~~~~~   82 (275)
T 2pd4_A            6 GKKGLIVGVANNKSIAYGIAQSCFNQGA--TLAFTYLNESLEKRVRPIAQELNSPYVYE-LDVSKEEHFKSLYNSVKKDL   82 (275)
T ss_dssp             TCEEEEECCCSTTSHHHHHHHHHHTTTC--EEEEEESSTTTHHHHHHHHHHTTCCCEEE-CCTTCHHHHHHHHHHHHHHT
T ss_pred             CCEEEEECCCCCCcHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcCCcEEEE-cCCCCHHHHHHHHHHHHHHc
Confidence            3589999998  8999999999999987  8999998762 222233322110111111 11122   22222       


Q ss_pred             CCCcEEEEcCCCCCC-----C--CCC---HHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecC
Q 018512          109 TGMDLVIIPAGVPRK-----P--GMT---RDDLFNINAGIVRTLCEGIAKCC-PNATVNLISN  160 (354)
Q Consensus       109 ~~aDvVIi~ag~~~~-----~--g~~---r~d~~~~n~~~~~~i~~~i~~~~-p~a~viv~tN  160 (354)
                      ...|++|+.||....     +  ..+   ....+..|+.....+.+.+.++- +.+.||++|.
T Consensus        83 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS  145 (275)
T 2pd4_A           83 GSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLSY  145 (275)
T ss_dssp             SCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEEC
T ss_pred             CCCCEEEECCccCccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEec
Confidence            367999999987532     1  122   23456778888888887776653 2366777764

>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}

Probab=97.08  E-value=0.001  Score=54.51  Aligned_cols=95  Identities=12%  Similarity=0.154  Sum_probs=59.2

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCc---HHh-hhCCCcEEEEcC
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQ---LEN-ALTGMDLVIIPA  118 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d---~~~-al~~aDvVIi~a  118 (354)
                      .+|+|+|+ |.+|+.++..|...|+  +++++|.++..  ...+..... ..+.+  +.++   +++ .+.+||+||++.
T Consensus         8 ~~viIiG~-G~~G~~la~~L~~~g~--~v~vid~~~~~--~~~~~~~g~-~~i~g--d~~~~~~l~~a~i~~ad~vi~~~   79 (140)
T 3fwz_A            8 NHALLVGY-GRVGSLLGEKLLASDI--PLVVIETSRTR--VDELRERGV-RAVLG--NAANEEIMQLAHLECAKWLILTI   79 (140)
T ss_dssp             SCEEEECC-SHHHHHHHHHHHHTTC--CEEEEESCHHH--HHHHHHTTC-EEEES--CTTSHHHHHHTTGGGCSEEEECC
T ss_pred             CCEEEECc-CHHHHHHHHHHHHCCC--CEEEEECCHHH--HHHHHHcCC-CEEEC--CCCCHHHHHhcCcccCCEEEEEC
Confidence            58999999 9999999999999888  89999998621  222332221 11111  1122   222 357999999974


Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecC
Q 018512          119 GVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISN  160 (354)
Q Consensus       119 g~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tN  160 (354)
                      +..           ..|..    ++..+++..|+..++.-.|
T Consensus        80 ~~~-----------~~n~~----~~~~a~~~~~~~~iiar~~  106 (140)
T 3fwz_A           80 PNG-----------YEAGE----IVASARAKNPDIEIIARAH  106 (140)
T ss_dssp             SCH-----------HHHHH----HHHHHHHHCSSSEEEEEES
T ss_pred             CCh-----------HHHHH----HHHHHHHHCCCCeEEEEEC
Confidence            321           23333    3445666778876665543

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}

Probab=97.08  E-value=0.0019  Score=58.94  Aligned_cols=144  Identities=8%  Similarity=0.035  Sum_probs=79.0

Q ss_pred             CCCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEE-EeCCCcHH-------hhhCC
Q 018512           39 GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRG-FLGQPQLE-------NALTG  110 (354)
Q Consensus        39 ~~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~-~~~~~d~~-------~al~~  110 (354)
                      +-+.++|.|+||+|.+|.+++..|+..|.  +|++.|++....     .. .. ..+.. +....+..       +.+..
T Consensus        11 ~~~~k~vlVTGas~GIG~aia~~l~~~G~--~V~~~~r~~~~~-----~~-~~-~~~~~Dv~~~~~v~~~~~~~~~~~g~   81 (269)
T 3vtz_A           11 EFTDKVAIVTGGSSGIGLAVVDALVRYGA--KVVSVSLDEKSD-----VN-VS-DHFKIDVTNEEEVKEAVEKTTKKYGR   81 (269)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTTC--EEEEEESCC--C-----TT-SS-EEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCC--EEEEEeCCchhc-----cC-ce-eEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            33456899999999999999999999998  899999876211     00 00 00110 00001122       22348


Q ss_pred             CcEEEEcCCCCCCCC---CCH---HHHHHHHHHHHHH----HHHHHhhhCCCeEEEEecCCCCCchHHHHHHHHHhCCCC
Q 018512          111 MDLVIIPAGVPRKPG---MTR---DDLFNINAGIVRT----LCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYD  180 (354)
Q Consensus       111 aDvVIi~ag~~~~~g---~~r---~d~~~~n~~~~~~----i~~~i~~~~p~a~viv~tNPv~~~~~~~~~~~~~~~~~p  180 (354)
                      .|++|+.||......   .+.   ...+..|+.....    +.+.+++. ..+.||++|......            +.+
T Consensus        82 iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-~~g~iv~isS~~~~~------------~~~  148 (269)
T 3vtz_A           82 IDILVNNAGIEQYSPLHLTPTEIWRRIIDVNVNGSYLMAKYTIPVMLAI-GHGSIINIASVQSYA------------ATK  148 (269)
T ss_dssp             CCEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCGGGTS------------BCT
T ss_pred             CCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCCEEEEECchhhcc------------CCC
Confidence            899999998753221   122   2344566555444    44445444 356666665422111            122


Q ss_pred             CCCEEEeccchHHHHHHHHHHHhC
Q 018512          181 PKKLLGVTMLDVVRANTFVAEVLG  204 (354)
Q Consensus       181 ~~kviG~t~ld~~r~~~~la~~l~  204 (354)
                      ..-.++.+......+.+.+|..++
T Consensus       149 ~~~~Y~asKaa~~~l~~~la~e~~  172 (269)
T 3vtz_A          149 NAAAYVTSKHALLGLTRSVAIDYA  172 (269)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             CChhHHHHHHHHHHHHHHHHHHhc
Confidence            222333333334556777777774

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*

Probab=97.07  E-value=0.0061  Score=55.66  Aligned_cols=149  Identities=11%  Similarity=0.039  Sum_probs=82.3

Q ss_pred             CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCCCCeEEEEe-CCCc---HHhhh------
Q 018512           41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQ---LENAL------  108 (354)
Q Consensus        41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~~~~v~~~~-~~~d---~~~al------  108 (354)
                      +.+++.|+||+|.+|.+++..|+..|.  +|++.|++.  ......++.... ...+..+. +-+|   .++++      
T Consensus        26 ~~k~~lVTGas~GIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~  102 (277)
T 4fc7_A           26 RDKVAFITGGGSGIGFRIAEIFMRHGC--HTVIASRSLPRVLTAARKLAGAT-GRRCLPLSMDVRAPPAVMAAVDQALKE  102 (277)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHTTTC--EEEEEESCHHHHHHHHHHHHHHH-SSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHHhc-CCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            446899999999999999999999988  899999976  222233332211 11222221 1122   22222      


Q ss_pred             -CCCcEEEEcCCCCCCCC---CC---HHHHHHHHHHHHHHHHHHHhhh---CCCeEEEEecCCCCCchHHHHHHHHHhCC
Q 018512          109 -TGMDLVIIPAGVPRKPG---MT---RDDLFNINAGIVRTLCEGIAKC---CPNATVNLISNPVNSTVPIAAEVFKKAGT  178 (354)
Q Consensus       109 -~~aDvVIi~ag~~~~~g---~~---r~d~~~~n~~~~~~i~~~i~~~---~p~a~viv~tNPv~~~~~~~~~~~~~~~~  178 (354)
                       ...|++|+.||......   .+   ....+..|+.....+.+.+...   ...+.||++|.-..          ..  +
T Consensus       103 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~----------~~--~  170 (277)
T 4fc7_A          103 FGRIDILINCAAGNFLCPAGALSFNAFKTVMDIDTSGTFNVSRVLYEKFFRDHGGVIVNITATLG----------NR--G  170 (277)
T ss_dssp             HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCSHH----------HH--T
T ss_pred             cCCCCEEEECCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhh----------CC--C
Confidence             37899999998643211   22   2334566766655555554322   13566777653210          01  2


Q ss_pred             CCCCCEEEeccchHHHHHHHHHHHhC
Q 018512          179 YDPKKLLGVTMLDVVRANTFVAEVLG  204 (354)
Q Consensus       179 ~p~~kviG~t~ld~~r~~~~la~~l~  204 (354)
                      .+..-.++.+......+.+.+|..++
T Consensus       171 ~~~~~~Y~asKaa~~~l~~~la~e~~  196 (277)
T 4fc7_A          171 QALQVHAGSAKAAVDAMTRHLAVEWG  196 (277)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHHG
T ss_pred             CCCcHHHHHHHHHHHHHHHHHHHHhh
Confidence            23222333333334456677777763

>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*

Probab=97.06  E-value=0.0022  Score=59.95  Aligned_cols=65  Identities=22%  Similarity=0.389  Sum_probs=49.8

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcC
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA  118 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~a  118 (354)
                      ++||.+||- |.+|+.+|..|+..|+  +|+.||+++.  .+.++.....    +.   ..++.++.++||+||.+-
T Consensus         3 M~kIgfIGl-G~MG~~mA~~L~~~G~--~v~v~dr~~~--~~~~l~~~Ga----~~---a~s~~e~~~~~dvv~~~l   67 (300)
T 3obb_A            3 MKQIAFIGL-GHMGAPMATNLLKAGY--LLNVFDLVQS--AVDGLVAAGA----SA---ARSARDAVQGADVVISML   67 (300)
T ss_dssp             CCEEEEECC-STTHHHHHHHHHHTTC--EEEEECSSHH--HHHHHHHTTC----EE---CSSHHHHHTTCSEEEECC
T ss_pred             cCEEEEeee-hHHHHHHHHHHHhCCC--eEEEEcCCHH--HHHHHHHcCC----EE---cCCHHHHHhcCCceeecC
Confidence            459999999 9999999999999998  9999999752  2233443321    11   245788999999999973

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A

Probab=97.04  E-value=0.006  Score=54.27  Aligned_cols=109  Identities=13%  Similarity=0.202  Sum_probs=64.9

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEE-EeCCCcHH-------hhhCCCcEE
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRG-FLGQPQLE-------NALTGMDLV  114 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~-~~~~~d~~-------~al~~aDvV  114 (354)
                      +++.|+||+|.+|..++..|+..|.  +|++.|++... ...++. .   ..+.. +.. .+.+       +.+.+.|++
T Consensus         3 k~vlVTGas~giG~~~a~~l~~~G~--~V~~~~r~~~~-~~~~~~-~---~~~~~D~~~-~~~~~~~~~~~~~~g~id~l   74 (239)
T 2ekp_A            3 RKALVTGGSRGIGRAIAEALVARGY--RVAIASRNPEE-AAQSLG-A---VPLPTDLEK-DDPKGLVKRALEALGGLHVL   74 (239)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESSCHH-HHHHHT-C---EEEECCTTT-SCHHHHHHHHHHHHTSCCEE
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEeCCHHH-HHHhhC-c---EEEecCCch-HHHHHHHHHHHHHcCCCCEE
Confidence            4799999999999999999999997  89999997632 222221 1   00110 111 2222       234589999


Q ss_pred             EEcCCCCCCC---CCCH---HHHHHHHHHH----HHHHHHHHhhhCCCeEEEEecC
Q 018512          115 IIPAGVPRKP---GMTR---DDLFNINAGI----VRTLCEGIAKCCPNATVNLISN  160 (354)
Q Consensus       115 Ii~ag~~~~~---g~~r---~d~~~~n~~~----~~~i~~~i~~~~p~a~viv~tN  160 (354)
                      |+.||.....   ..+.   ...+.-|+..    .+.+.+.+++.. .+.|+++|.
T Consensus        75 v~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-~g~iv~isS  129 (239)
T 2ekp_A           75 VHAAAVNVRKPALELSYEEWRRVLYLHLDVAFLLAQAAAPHMAEAG-WGRVLFIGS  129 (239)
T ss_dssp             EECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECC
T ss_pred             EECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEECc
Confidence            9999865321   1222   2344455544    444445555443 456666653

>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}

Probab=97.02  E-value=0.0016  Score=62.09  Aligned_cols=90  Identities=18%  Similarity=0.211  Sum_probs=57.2

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhC----CCcEEEEc
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALT----GMDLVIIP  117 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~----~aDvVIi~  117 (354)
                      .+||+|||+ |.+|.+++..|...|.  +|+++|+++...  ..+.....    ..   ..++.++++    +||+||++
T Consensus         8 ~~kIgIIG~-G~mG~slA~~L~~~G~--~V~~~dr~~~~~--~~a~~~G~----~~---~~~~~e~~~~a~~~aDlVila   75 (341)
T 3ktd_A            8 SRPVCILGL-GLIGGSLLRDLHAANH--SVFGYNRSRSGA--KSAVDEGF----DV---SADLEATLQRAAAEDALIVLA   75 (341)
T ss_dssp             SSCEEEECC-SHHHHHHHHHHHHTTC--CEEEECSCHHHH--HHHHHTTC----CE---ESCHHHHHHHHHHTTCEEEEC
T ss_pred             CCEEEEEee-cHHHHHHHHHHHHCCC--EEEEEeCCHHHH--HHHHHcCC----ee---eCCHHHHHHhcccCCCEEEEe
Confidence            469999998 9999999999999887  899999875211  11122221    11   134555554    57999998


Q ss_pred             CCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 018512          118 AGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  159 (354)
Q Consensus       118 ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~t  159 (354)
                      ..                ...+.++++.+..+.|+++|+.++
T Consensus        76 vP----------------~~~~~~vl~~l~~~~~~~iv~Dv~  101 (341)
T 3ktd_A           76 VP----------------MTAIDSLLDAVHTHAPNNGFTDVV  101 (341)
T ss_dssp             SC----------------HHHHHHHHHHHHHHCTTCCEEECC
T ss_pred             CC----------------HHHHHHHHHHHHccCCCCEEEEcC
Confidence            42                112334444555556777665554

>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}

Probab=97.02  E-value=0.0011  Score=58.53  Aligned_cols=69  Identities=19%  Similarity=0.245  Sum_probs=45.6

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCc---HHhh-hCCCcEEEEcC
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQ---LENA-LTGMDLVIIPA  118 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d---~~~a-l~~aDvVIi~a  118 (354)
                      |||+|+|+ |.+|+.++..|...++  +++++|.++..  ..++........+.+  ..++   ++++ +++||+||++.
T Consensus         1 M~iiIiG~-G~~G~~la~~L~~~g~--~v~vid~~~~~--~~~l~~~~~~~~i~g--d~~~~~~l~~a~i~~ad~vi~~~   73 (218)
T 3l4b_C            1 MKVIIIGG-ETTAYYLARSMLSRKY--GVVIINKDREL--CEEFAKKLKATIIHG--DGSHKEILRDAEVSKNDVVVILT   73 (218)
T ss_dssp             CCEEEECC-HHHHHHHHHHHHHTTC--CEEEEESCHHH--HHHHHHHSSSEEEES--CTTSHHHHHHHTCCTTCEEEECC
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCC--eEEEEECCHHH--HHHHHHHcCCeEEEc--CCCCHHHHHhcCcccCCEEEEec
Confidence            79999998 9999999999999888  89999987622  122221111111111  1122   3333 78999999974

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}

Probab=96.99  E-value=0.009  Score=54.82  Aligned_cols=118  Identities=15%  Similarity=0.166  Sum_probs=74.0

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc---------hhHHHHHhcCCCCCeEEEEe-CCCc---HHhhh
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT---------PGVTADISHMDTGAVVRGFL-GQPQ---LENAL  108 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~---------~g~~~dl~~~~~~~~v~~~~-~~~d---~~~al  108 (354)
                      .+++.|+||+|.+|..++..|+..|.  +|++.|++..         +....++....  ..+..+. +-+|   .++++
T Consensus         9 ~k~vlVTGas~GIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~   84 (285)
T 3sc4_A            9 GKTMFISGGSRGIGLAIAKRVAADGA--NVALVAKSAEPHPKLPGTIYTAAKEIEEAG--GQALPIVGDIRDGDAVAAAV   84 (285)
T ss_dssp             TCEEEEESCSSHHHHHHHHHHHTTTC--EEEEEESCCSCCSSSCCCHHHHHHHHHHHT--SEEEEEECCTTSHHHHHHHH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCC--EEEEEECChhhhhhhhHHHHHHHHHHHhcC--CcEEEEECCCCCHHHHHHHH
Confidence            45899999999999999999999988  8999999752         11223333221  2233221 1122   22223


Q ss_pred             -------CCCcEEEEcCCCCCCC---CCCH---HHHHHHHHHHHHHHHHHHhhhC---CCeEEEEecCCCC
Q 018512          109 -------TGMDLVIIPAGVPRKP---GMTR---DDLFNINAGIVRTLCEGIAKCC---PNATVNLISNPVN  163 (354)
Q Consensus       109 -------~~aDvVIi~ag~~~~~---g~~r---~d~~~~n~~~~~~i~~~i~~~~---p~a~viv~tNPv~  163 (354)
                             ...|++|+.||.....   ..+.   ...+.-|+.....+.+.+...-   ..+.||++|....
T Consensus        85 ~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~  155 (285)
T 3sc4_A           85 AKTVEQFGGIDICVNNASAINLGSIEEVPLKRFDLMNGIQVRGTYAVSQSCIPHMKGRDNPHILTLSPPIR  155 (285)
T ss_dssp             HHHHHHHSCCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGTTTSSSCEEEECCCCCC
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhh
Confidence                   3899999999875321   1222   3345678877777777766553   3567777775443

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*

Probab=96.99  E-value=0.0023  Score=57.75  Aligned_cols=149  Identities=15%  Similarity=0.076  Sum_probs=82.8

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHh---CCCCcEEEEEecCC--chhHHHHHhcCCCCCeEEEEe-CCCcH---Hhhh----
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKI---NPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQL---ENAL----  108 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~---~~~~~ei~L~D~~~--~~g~~~dl~~~~~~~~v~~~~-~~~d~---~~al----  108 (354)
                      .+++.|+||+|.+|..++..|+.   .|.  +|++.|++.  ......++........+..+. +-+|.   ++++    
T Consensus         6 ~k~~lVTGas~gIG~~ia~~l~~~~~~G~--~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   83 (259)
T 1oaa_A            6 CAVCVLTGASRGFGRALAPQLARLLSPGS--VMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAVR   83 (259)
T ss_dssp             SEEEEESSCSSHHHHHHHHHHHTTBCTTC--EEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CcEEEEeCCCChHHHHHHHHHHHhhcCCC--eEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEecCCCCHHHHHHHHHHHH
Confidence            45789999999999999999998   677  899999976  222233333211012232221 11222   1222    


Q ss_pred             C-----CCc--EEEEcCCCCCCCC------CC---HHHHHHHHHHHHHHHHHHHhhhC-----CCeEEEEecCCCCCchH
Q 018512          109 T-----GMD--LVIIPAGVPRKPG------MT---RDDLFNINAGIVRTLCEGIAKCC-----PNATVNLISNPVNSTVP  167 (354)
Q Consensus       109 ~-----~aD--vVIi~ag~~~~~g------~~---r~d~~~~n~~~~~~i~~~i~~~~-----p~a~viv~tNPv~~~~~  167 (354)
                      +     ..|  ++|+.||.....+      .+   ....+.-|+.....+.+.+..+.     ..+.||++|.-....  
T Consensus        84 ~~~~~g~~d~~~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~g~iv~isS~~~~~--  161 (259)
T 1oaa_A           84 ELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQ--  161 (259)
T ss_dssp             HSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGTS--
T ss_pred             hccccccCCccEEEECCcccCCCCcchhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCceEEEEcCchhcC--
Confidence            1     347  9999998743211      22   23355677777666666665443     236677776422111  


Q ss_pred             HHHHHHHHhCCCCCCCEEEeccchHHHHHHHHHHHhC
Q 018512          168 IAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEVLG  204 (354)
Q Consensus       168 ~~~~~~~~~~~~p~~kviG~t~ld~~r~~~~la~~l~  204 (354)
                                +.|..-.++.+......+.+.++..++
T Consensus       162 ----------~~~~~~~Y~asKaa~~~~~~~la~e~~  188 (259)
T 1oaa_A          162 ----------PYKGWGLYCAGKAARDMLYQVLAAEEP  188 (259)
T ss_dssp             ----------CCTTCHHHHHHHHHHHHHHHHHHHHCT
T ss_pred             ----------CCCCccHHHHHHHHHHHHHHHHHhhCC
Confidence                      223222333333334456677777764

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}

Probab=96.97  E-value=0.0021  Score=58.35  Aligned_cols=106  Identities=18%  Similarity=0.166  Sum_probs=63.6

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEe-CCCc---HHhhh-------CCC
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFL-GQPQ---LENAL-------TGM  111 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~-~~~d---~~~al-------~~a  111 (354)
                      ++|.|+||+|.+|.+++..|+..|.  +|++.|++....     ..    ..+..+. +-+|   .++++       .+.
T Consensus        29 k~vlVTGas~gIG~aia~~l~~~G~--~V~~~~r~~~~~-----~~----~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i   97 (260)
T 3un1_A           29 KVVVITGASQGIGAGLVRAYRDRNY--RVVATSRSIKPS-----AD----PDIHTVAGDISKPETADRIVREGIERFGRI   97 (260)
T ss_dssp             CEEEESSCSSHHHHHHHHHHHHTTC--EEEEEESSCCCC-----SS----TTEEEEESCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCC--EEEEEeCChhhc-----cc----CceEEEEccCCCHHHHHHHHHHHHHHCCCC
Confidence            4799999999999999999999998  899999875210     00    0111111 1112   22223       389


Q ss_pred             cEEEEcCCCCCCCC---CC---HHHHHHHHHHHHHHHHHH----HhhhCCCeEEEEecC
Q 018512          112 DLVIIPAGVPRKPG---MT---RDDLFNINAGIVRTLCEG----IAKCCPNATVNLISN  160 (354)
Q Consensus       112 DvVIi~ag~~~~~g---~~---r~d~~~~n~~~~~~i~~~----i~~~~p~a~viv~tN  160 (354)
                      |++|+.||......   .+   ....+.-|+.....+.+.    +++. ..+.|+++|.
T Consensus        98 D~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-~~g~iv~isS  155 (260)
T 3un1_A           98 DSLVNNAGVFLAKPFVEMTQEDYDHNLGVNVAGFFHITQRAAAEMLKQ-GSGHIVSITT  155 (260)
T ss_dssp             CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-TCEEEEEECC
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCcEEEEEec
Confidence            99999998754221   12   233455676555444444    4443 3455666653

>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}

Probab=96.96  E-value=0.0025  Score=59.35  Aligned_cols=63  Identities=19%  Similarity=0.310  Sum_probs=43.8

Q ss_pred             eEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcC
Q 018512           44 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA  118 (354)
Q Consensus        44 kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~a  118 (354)
                      ||.+||- |.+|+.+|..|+..|+  +|+.||+++.+  +.++....    ...   ..++.++++++|+||.+.
T Consensus         7 kIgfIGL-G~MG~~mA~~L~~~G~--~V~v~dr~~~~--~~~l~~~G----~~~---~~s~~e~~~~~dvvi~~l   69 (297)
T 4gbj_A            7 KIAFLGL-GNLGTPIAEILLEAGY--ELVVWNRTASK--AEPLTKLG----ATV---VENAIDAITPGGIVFSVL   69 (297)
T ss_dssp             EEEEECC-STTHHHHHHHHHHTTC--EEEEC---------CTTTTTT----CEE---CSSGGGGCCTTCEEEECC
T ss_pred             cEEEEec-HHHHHHHHHHHHHCCC--eEEEEeCCHHH--HHHHHHcC----CeE---eCCHHHHHhcCCceeeec
Confidence            8999999 9999999999999998  99999997621  11222222    222   235678899999999974

>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}

Probab=96.96  E-value=0.00079  Score=59.46  Aligned_cols=136  Identities=16%  Similarity=0.173  Sum_probs=82.3

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcCCCC
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVP  121 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~ag~~  121 (354)
                      .+++.|+||+|.+|.+++..|+..|.  .|++.|++..    .|+.+...   ++      ..-+.+...|++|+.||..
T Consensus         6 ~k~vlVTGas~gIG~~~a~~l~~~G~--~V~~~~r~~~----~D~~~~~~---v~------~~~~~~g~id~lv~nAg~~   70 (223)
T 3uce_A            6 KTVYVVLGGTSGIGAELAKQLESEHT--IVHVASRQTG----LDISDEKS---VY------HYFETIGAFDHLIVTAGSY   70 (223)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHCSTTE--EEEEESGGGT----CCTTCHHH---HH------HHHHHHCSEEEEEECCCCC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCC--EEEEecCCcc----cCCCCHHH---HH------HHHHHhCCCCEEEECCCCC
Confidence            34789999999999999999998887  8999998642    12221110   00      1123346789999999865


Q ss_pred             CCC----CCC---HHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecCCCCCchHHHHHHHHHhCCCCCCCEEEeccchHH
Q 018512          122 RKP----GMT---RDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVV  193 (354)
Q Consensus       122 ~~~----g~~---r~d~~~~n~~~~~~i~~~i~~~~-p~a~viv~tNPv~~~~~~~~~~~~~~~~~p~~kviG~t~ld~~  193 (354)
                      ...    ..+   ....+..|+.....+.+.+.++- +.+.|+++|.....            .+.|..-.++.+.....
T Consensus        71 ~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~~sS~~~~------------~~~~~~~~Y~asK~a~~  138 (223)
T 3uce_A           71 APAGKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQGGSITLTSGMLSR------------KVVANTYVKAAINAAIE  138 (223)
T ss_dssp             CCCSCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEEEEEEEEECCGGGT------------SCCTTCHHHHHHHHHHH
T ss_pred             CCCCCcccCCHHHHHhhheeeeeeHHHHHHHHHhhccCCeEEEEecchhhc------------cCCCCchHHHHHHHHHH
Confidence            222    122   23346678888888888776654 34667776632211            12222223333333344


Q ss_pred             HHHHHHHHHhC
Q 018512          194 RANTFVAEVLG  204 (354)
Q Consensus       194 r~~~~la~~l~  204 (354)
                      .+.+.+++.++
T Consensus       139 ~~~~~la~e~~  149 (223)
T 3uce_A          139 ATTKVLAKELA  149 (223)
T ss_dssp             HHHHHHHHHHT
T ss_pred             HHHHHHHHhhc
Confidence            56777787775

>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6

Probab=96.95  E-value=0.0022  Score=60.75  Aligned_cols=65  Identities=23%  Similarity=0.262  Sum_probs=46.9

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcC
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA  118 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~a  118 (354)
                      .+||+|||+ |.+|.+++..|...|.  +|+++|++....... .....    +...    ++.+++++||+||++.
T Consensus        16 ~~~I~IIG~-G~mG~alA~~L~~~G~--~V~~~~~~~~~~~~~-a~~~G----~~~~----~~~e~~~~aDvVilav   80 (338)
T 1np3_A           16 GKKVAIIGY-GSQGHAHACNLKDSGV--DVTVGLRSGSATVAK-AEAHG----LKVA----DVKTAVAAADVVMILT   80 (338)
T ss_dssp             TSCEEEECC-SHHHHHHHHHHHHTTC--CEEEECCTTCHHHHH-HHHTT----CEEE----CHHHHHHTCSEEEECS
T ss_pred             CCEEEEECc-hHHHHHHHHHHHHCcC--EEEEEECChHHHHHH-HHHCC----CEEc----cHHHHHhcCCEEEEeC
Confidence            468999999 9999999999998887  899999876321111 11111    1221    4568899999999984

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}

Probab=96.95  E-value=0.0013  Score=59.01  Aligned_cols=147  Identities=17%  Similarity=0.139  Sum_probs=82.9

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEec-CC--chhHHHHHhcCCCCCeEEEEe-CCCcH---HhhhC-----
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDV-VN--TPGVTADISHMDTGAVVRGFL-GQPQL---ENALT-----  109 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~-~~--~~g~~~dl~~~~~~~~v~~~~-~~~d~---~~al~-----  109 (354)
                      .+++.|+||+|.+|..++..|+..|.  .|++.+. +.  ......++....  ..+..+. +-++.   +..++     
T Consensus         7 ~k~vlITGas~gIG~~~a~~l~~~G~--~v~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~   82 (255)
T 3icc_A            7 GKVALVTGASRGIGRAIAKRLANDGA--LVAIHYGNRKEEAEETVYEIQSNG--GSAFSIGANLESLHGVEALYSSLDNE   82 (255)
T ss_dssp             TCEEEETTCSSHHHHHHHHHHHHTTC--EEEEEESSCSHHHHHHHHHHHHTT--CEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCC--eEEEEeCCchHHHHHHHHHHHhcC--CceEEEecCcCCHHHHHHHHHHHHHH
Confidence            35799999999999999999999997  7877644 33  222333444322  2222221 11221   11121     


Q ss_pred             --------CCcEEEEcCCCCCCCC---CCH---HHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecCCCCCchHHHHHHHH
Q 018512          110 --------GMDLVIIPAGVPRKPG---MTR---DDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNSTVPIAAEVFK  174 (354)
Q Consensus       110 --------~aDvVIi~ag~~~~~g---~~r---~d~~~~n~~~~~~i~~~i~~~~-p~a~viv~tNPv~~~~~~~~~~~~  174 (354)
                              ..|++|+.||......   .+.   ...+.-|+.....+.+.+...- +.+.|+++|......         
T Consensus        83 ~~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~isS~~~~~---------  153 (255)
T 3icc_A           83 LQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAATRI---------  153 (255)
T ss_dssp             HHHHHSSSCEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGGTS---------
T ss_pred             hcccccCCcccEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHhhCCCCEEEEeCChhhcc---------
Confidence                    2899999998753221   122   2345677777777777766543 356777776432211         


Q ss_pred             HhCCCCCCCEEEeccchHHHHHHHHHHHhC
Q 018512          175 KAGTYDPKKLLGVTMLDVVRANTFVAEVLG  204 (354)
Q Consensus       175 ~~~~~p~~kviG~t~ld~~r~~~~la~~l~  204 (354)
                         +.|..-.++.+......+.+.++..++
T Consensus       154 ---~~~~~~~Y~asKaa~~~~~~~la~e~~  180 (255)
T 3icc_A          154 ---SLPDFIAYSMTKGAINTMTFTLAKQLG  180 (255)
T ss_dssp             ---CCTTBHHHHHHHHHHHHHHHHHHHHHG
T ss_pred             ---CCCCcchhHHhHHHHHHHHHHHHHHHH
Confidence               233322333333334456667777763

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}

Probab=96.93  E-value=0.0036  Score=56.24  Aligned_cols=107  Identities=17%  Similarity=0.236  Sum_probs=63.7

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCc---HHhhh-------CCC
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQ---LENAL-------TGM  111 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d---~~~al-------~~a  111 (354)
                      .+++.|+||+|.+|..++..|+..|.  +|++.|++...      ....  ..... .+-+|   +++++       .+.
T Consensus         7 ~k~vlVTGas~giG~~ia~~l~~~G~--~V~~~~r~~~~------~~~~--~~~~~-~D~~d~~~~~~~~~~~~~~~g~i   75 (250)
T 2fwm_X            7 GKNVWVTGAGKGIGYATALAFVEAGA--KVTGFDQAFTQ------EQYP--FATEV-MDVADAAQVAQVCQRLLAETERL   75 (250)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHHTTC--EEEEEESCCCS------SCCS--SEEEE-CCTTCHHHHHHHHHHHHHHCSCC
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEeCchhh------hcCC--ceEEE-cCCCCHHHHHHHHHHHHHHcCCC
Confidence            35899999999999999999999997  89999987521      1111  11111 11112   22333       378


Q ss_pred             cEEEEcCCCCCCC---CCCH---HHHHHHHHHHHHHH----HHHHhhhCCCeEEEEecC
Q 018512          112 DLVIIPAGVPRKP---GMTR---DDLFNINAGIVRTL----CEGIAKCCPNATVNLISN  160 (354)
Q Consensus       112 DvVIi~ag~~~~~---g~~r---~d~~~~n~~~~~~i----~~~i~~~~p~a~viv~tN  160 (354)
                      |+||+.||.....   ..+.   ...+..|+.....+    .+.+++.. .+.||++|.
T Consensus        76 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-~g~iv~isS  133 (250)
T 2fwm_X           76 DALVNAAGILRMGATDQLSKEDWQQTFAVNVGGAFNLFQQTMNQFRRQR-GGAIVTVAS  133 (250)
T ss_dssp             CEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECC
T ss_pred             CEEEECCCcCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhcC-CCEEEEECc
Confidence            9999999875321   1222   23455565544444    44445544 455666653

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2

Probab=96.93  E-value=0.002  Score=58.71  Aligned_cols=112  Identities=19%  Similarity=0.164  Sum_probs=65.4

Q ss_pred             CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCch--hHHHHHhcCCCCCeEEEE-eCCCc---HHhhh------
Q 018512           41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP--GVTADISHMDTGAVVRGF-LGQPQ---LENAL------  108 (354)
Q Consensus        41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~--g~~~dl~~~~~~~~v~~~-~~~~d---~~~al------  108 (354)
                      +.+++.|+||+|.+|..++..|+..|.  +|++.|+++..  ....++..      +..+ .+-+|   .++++      
T Consensus         8 ~~k~vlVTGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~------~~~~~~Dv~d~~~v~~~~~~~~~~   79 (270)
T 1yde_A            8 AGKVVVVTGGGRGIGAGIVRAFVNSGA--RVVICDKDESGGRALEQELPG------AVFILCDVTQEDDVKTLVSETIRR   79 (270)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHCTT------EEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHhcC------CeEEEcCCCCHHHHHHHHHHHHHH
Confidence            345899999999999999999999997  89999987521  11222211      1111 11122   22222      


Q ss_pred             -CCCcEEEEcCCCCCCCC----CC---HHHHHHHHHHHHHHHHHHHhhhC--CCeEEEEecC
Q 018512          109 -TGMDLVIIPAGVPRKPG----MT---RDDLFNINAGIVRTLCEGIAKCC--PNATVNLISN  160 (354)
Q Consensus       109 -~~aDvVIi~ag~~~~~g----~~---r~d~~~~n~~~~~~i~~~i~~~~--p~a~viv~tN  160 (354)
                       ...|++|+.||.....+    .+   ....+..|+.....+.+.+.++-  ..+.||++|.
T Consensus        80 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS  141 (270)
T 1yde_A           80 FGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQGNVINISS  141 (270)
T ss_dssp             HSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECC
T ss_pred             cCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCEEEEEcC
Confidence             37899999998653211    12   23345566655555544443221  1356666653

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0

Probab=96.93  E-value=0.0043  Score=55.94  Aligned_cols=114  Identities=11%  Similarity=0.050  Sum_probs=65.2

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc--hhHHHHHhcCCCCCeEEEEe-CCCc---HHhhh-------
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFL-GQPQ---LENAL-------  108 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~--~g~~~dl~~~~~~~~v~~~~-~~~d---~~~al-------  108 (354)
                      ++++.|+||+|.+|.+++..|+..|.  +|++.+.+..  .....++.... ...+..+. +-+|   .++++       
T Consensus         7 ~k~vlVTGas~gIG~~~a~~l~~~G~--~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   83 (264)
T 3i4f_A            7 VRHALITAGTKGLGKQVTEKLLAKGY--SVTVTYHSDTTAMETMKETYKDV-EERLQFVQADVTKKEDLHKIVEEAMSHF   83 (264)
T ss_dssp             CCEEEETTTTSHHHHHHHHHHHHTTC--EEEEEESSCHHHHHHHHHHTGGG-GGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             cCEEEEeCCCchhHHHHHHHHHHCCC--EEEEEcCCChHHHHHHHHHHHhc-CCceEEEEecCCCHHHHHHHHHHHHHHh
Confidence            35799999999999999999999998  8999887652  11122222111 12233321 1122   22333       


Q ss_pred             CCCcEEEEcCCC--CCCC---CCCH---HHHHHHHHHHHHHHHHH----HhhhCCCeEEEEec
Q 018512          109 TGMDLVIIPAGV--PRKP---GMTR---DDLFNINAGIVRTLCEG----IAKCCPNATVNLIS  159 (354)
Q Consensus       109 ~~aDvVIi~ag~--~~~~---g~~r---~d~~~~n~~~~~~i~~~----i~~~~p~a~viv~t  159 (354)
                      ...|+||+.||.  ....   ..+.   ...+..|+.....+.+.    +++.. .+.|+++|
T Consensus        84 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~g~iv~is  145 (264)
T 3i4f_A           84 GKIDFLINNAGPYVFERKKLVDYEEDEWNEMIQGNLTAVFHLLKLVVPVMRKQN-FGRIINYG  145 (264)
T ss_dssp             SCCCEEECCCCCCCCSCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEEC
T ss_pred             CCCCEEEECCcccccCCCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcC-CCeEEEEe
Confidence            388999999983  2111   1222   23455665555444444    45443 46666665

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}

Probab=96.92  E-value=0.0015  Score=58.88  Aligned_cols=142  Identities=13%  Similarity=0.095  Sum_probs=77.2

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc--hhHHHHHhcCCCCCeEEEEe-CCCc---HHhh-------hC
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFL-GQPQ---LENA-------LT  109 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~--~g~~~dl~~~~~~~~v~~~~-~~~d---~~~a-------l~  109 (354)
                      +++.|+||+|.+|.+++..|+..|....|++.++++.  .....++.     ..+..+. +-+|   .+++       +.
T Consensus         3 k~~lVTGas~GIG~aia~~l~~~g~~~~v~~~~r~~~~~~~~~~~~~-----~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   77 (254)
T 3kzv_A            3 KVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKYG-----DRFFYVVGDITEDSVLKQLVNAAVKGHG   77 (254)
T ss_dssp             CEEEECSTTSHHHHHHHHHHHHHCSSCEEEEEESCHHHHHHHHHHHG-----GGEEEEESCTTSHHHHHHHHHHHHHHHS
T ss_pred             CEEEEECCCchHHHHHHHHHHhcCCCeEEEEecCCHHHHHHHHHHhC-----CceEEEECCCCCHHHHHHHHHHHHHhcC
Confidence            4789999999999999999988764348888998752  22222221     1122211 1122   2222       23


Q ss_pred             CCcEEEEcCCCCCCC----CCCH---HHHHHHHHHHH----HHHHHHHhhhCCCeEEEEecCCCCCchHHHHHHHHHhCC
Q 018512          110 GMDLVIIPAGVPRKP----GMTR---DDLFNINAGIV----RTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGT  178 (354)
Q Consensus       110 ~aDvVIi~ag~~~~~----g~~r---~d~~~~n~~~~----~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~~~~~~~~~  178 (354)
                      ..|++|+.||.....    ..+.   ...+..|+...    +...+.+++..  +.|+++|......            +
T Consensus        78 ~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~--g~iv~isS~~~~~------------~  143 (254)
T 3kzv_A           78 KIDSLVANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSLVGIALPELKKTN--GNVVFVSSDACNM------------Y  143 (254)
T ss_dssp             CCCEEEEECCCCCCCTTTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEECCSCCCC------------S
T ss_pred             CccEEEECCcccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC--CeEEEEcCchhcc------------C
Confidence            789999999874321    1222   23445565444    44444445543  6677766433222            1


Q ss_pred             CCCCCEEEeccchHHHHHHHHHHHh
Q 018512          179 YDPKKLLGVTMLDVVRANTFVAEVL  203 (354)
Q Consensus       179 ~p~~kviG~t~ld~~r~~~~la~~l  203 (354)
                      .|..-.++.+......+.+.+|..+
T Consensus       144 ~~~~~~Y~asK~a~~~~~~~la~e~  168 (254)
T 3kzv_A          144 FSSWGAYGSSKAALNHFAMTLANEE  168 (254)
T ss_dssp             SCCSHHHHHHHHHHHHHHHHHHHHC
T ss_pred             CCCcchHHHHHHHHHHHHHHHHhhc
Confidence            2222233333333445667777765

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=96.91  E-value=0.0036  Score=56.04  Aligned_cols=111  Identities=15%  Similarity=0.188  Sum_probs=65.1

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEe-CCCcH---H---hhhCCCcEE
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFL-GQPQL---E---NALTGMDLV  114 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~-~~~d~---~---~al~~aDvV  114 (354)
                      .++|.|+||+|.+|..++..|+..|.  +|++.|+++..  ..++....   .+..+. +-+|.   +   +.+...|+|
T Consensus         6 ~k~vlVTGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~--~~~~~~~~---~~~~~~~D~~~~~~~~~~~~~~~~id~l   78 (246)
T 2ag5_A            6 GKVIILTAAAQGIGQAAALAFAREGA--KVIATDINESK--LQELEKYP---GIQTRVLDVTKKKQIDQFANEVERLDVL   78 (246)
T ss_dssp             TCEEEESSTTSHHHHHHHHHHHHTTC--EEEEEESCHHH--HGGGGGST---TEEEEECCTTCHHHHHHHHHHCSCCSEE
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEECCHHH--HHHHHhcc---CceEEEeeCCCHHHHHHHHHHhCCCCEE
Confidence            45899999999999999999999997  89999987521  11122111   122211 11222   1   224678999


Q ss_pred             EEcCCCCCCC---CCCH---HHHHHHHHHHHHHH----HHHHhhhCCCeEEEEecC
Q 018512          115 IIPAGVPRKP---GMTR---DDLFNINAGIVRTL----CEGIAKCCPNATVNLISN  160 (354)
Q Consensus       115 Ii~ag~~~~~---g~~r---~d~~~~n~~~~~~i----~~~i~~~~p~a~viv~tN  160 (354)
                      |+.||.....   ..+.   ...+.-|+.....+    .+.+++. ..+.|+++|.
T Consensus        79 v~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~-~~g~iv~isS  133 (246)
T 2ag5_A           79 FNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQ-KSGNIINMSS  133 (246)
T ss_dssp             EECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECC
T ss_pred             EECCccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCceEEEEec
Confidence            9999865321   1122   23345565544444    4444443 3466676654

>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}

Probab=96.91  E-value=0.012  Score=53.40  Aligned_cols=115  Identities=16%  Similarity=0.227  Sum_probs=70.7

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEE-eCCCc---HHhh--hCCCcEEE
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGF-LGQPQ---LENA--LTGMDLVI  115 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~-~~~~d---~~~a--l~~aDvVI  115 (354)
                      .+.+.|+||++-+|..++..|+..|.  .|++.|++..+.....+.....  ....+ .+-+|   .++.  .-..|++|
T Consensus         9 GKvalVTGas~GIG~aiA~~la~~Ga--~Vvi~~r~~~~~~~~~~~~~g~--~~~~~~~Dv~d~~~v~~~~~~g~iDiLV   84 (247)
T 4hp8_A            9 GRKALVTGANTGLGQAIAVGLAAAGA--EVVCAARRAPDETLDIIAKDGG--NASALLIDFADPLAAKDSFTDAGFDILV   84 (247)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHHTTC--EEEEEESSCCHHHHHHHHHTTC--CEEEEECCTTSTTTTTTSSTTTCCCEEE
T ss_pred             CCEEEEeCcCCHHHHHHHHHHHHcCC--EEEEEeCCcHHHHHHHHHHhCC--cEEEEEccCCCHHHHHHHHHhCCCCEEE
Confidence            34678889999999999999999998  8999999864333333433321  11111 11112   1111  23579999


Q ss_pred             EcCCCCCCCC---CCH---HHHHHHHH----HHHHHHHHHHhhhCCCeEEEEecC
Q 018512          116 IPAGVPRKPG---MTR---DDLFNINA----GIVRTLCEGIAKCCPNATVNLISN  160 (354)
Q Consensus       116 i~ag~~~~~g---~~r---~d~~~~n~----~~~~~i~~~i~~~~p~a~viv~tN  160 (354)
                      ..||......   .+.   ...+.-|+    -..+..++.|.+.+..+.||+++.
T Consensus        85 NNAGi~~~~~~~~~~~~~w~~~~~vNl~g~f~~~~~~~~~m~~~g~~G~IVnisS  139 (247)
T 4hp8_A           85 NNAGIIRRADSVEFSELDWDEVMDVNLKALFFTTQAFAKELLAKGRSGKVVNIAS  139 (247)
T ss_dssp             ECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECC
T ss_pred             ECCCCCCCCCcccccHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCCcEEEEEec
Confidence            9998754321   222   23344554    445666777777776777888764

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}

Probab=96.89  E-value=0.0099  Score=54.13  Aligned_cols=120  Identities=17%  Similarity=0.186  Sum_probs=70.4

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc---------hhHHHHHhcCCCCCeEEEEe-CCCc---HHhh-
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT---------PGVTADISHMDTGAVVRGFL-GQPQ---LENA-  107 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~---------~g~~~dl~~~~~~~~v~~~~-~~~d---~~~a-  107 (354)
                      .+++.|+||+|.+|..++..|+..|.  .|++.|++..         .....++....  ..+..+. +-+|   .++. 
T Consensus         6 ~k~~lVTGas~GIG~aia~~la~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~   81 (274)
T 3e03_A            6 GKTLFITGASRGIGLAIALRAARDGA--NVAIAAKSAVANPKLPGTIHSAAAAVNAAG--GQGLALKCDIREEDQVRAAV   81 (274)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESCCSCCTTSCCCHHHHHHHHHHHT--SEEEEEECCTTCHHHHHHHH
T ss_pred             CcEEEEECCCChHHHHHHHHHHHCCC--EEEEEeccchhhhhhHHHHHHHHHHHHhcC--CeEEEEeCCCCCHHHHHHHH
Confidence            45899999999999999999999997  8999998751         11222222211  2222221 1122   1222 


Q ss_pred             ------hCCCcEEEEcCCCCCCCC---CCH---HHHHHHHHHHHHHHHHHHhhh---CCCeEEEEecCCCCCc
Q 018512          108 ------LTGMDLVIIPAGVPRKPG---MTR---DDLFNINAGIVRTLCEGIAKC---CPNATVNLISNPVNST  165 (354)
Q Consensus       108 ------l~~aDvVIi~ag~~~~~g---~~r---~d~~~~n~~~~~~i~~~i~~~---~p~a~viv~tNPv~~~  165 (354)
                            +...|++|+.||......   .+.   ...+..|+.....+.+.+..+   ...+.||++|......
T Consensus        82 ~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~  154 (274)
T 3e03_A           82 AATVDTFGGIDILVNNASAIWLRGTLDTPMKRFDLMQQVNARGSFVCAQACLPHLLQAPNPHILTLAPPPSLN  154 (274)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHTHHHHHHHHHHHHHHHTTSSSCEEEECCCCCCCC
T ss_pred             HHHHHHcCCCCEEEECCCcccCCCcccCCHHHHHHHHhHhhHhHHHHHHHHHHHHHhcCCceEEEECChHhcC
Confidence                  347899999998753221   222   234456665555554444332   2356777777655444

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*

Probab=96.88  E-value=0.0019  Score=59.33  Aligned_cols=151  Identities=19%  Similarity=0.167  Sum_probs=81.2

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc--hhHHHHHhcCCCCCeEEEEe-CCCc---HHh-------hh
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFL-GQPQ---LEN-------AL  108 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~--~g~~~dl~~~~~~~~v~~~~-~~~d---~~~-------al  108 (354)
                      .+++.|+||+|.+|.+++..|+..|.  +|++.|++..  .....++   .  ..+..+. +-++   .++       .+
T Consensus         5 gk~~lVTGas~GIG~aia~~la~~G~--~V~~~~r~~~~~~~~~~~~---~--~~~~~~~~Dv~~~~~v~~~~~~~~~~~   77 (281)
T 3zv4_A            5 GEVALITGGASGLGRALVDRFVAEGA--RVAVLDKSAERLRELEVAH---G--GNAVGVVGDVRSLQDQKRAAERCLAAF   77 (281)
T ss_dssp             TCEEEEETCSSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHT---B--TTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcC--EEEEEeCCHHHHHHHHHHc---C--CcEEEEEcCCCCHHHHHHHHHHHHHhc
Confidence            35899999999999999999999997  8999998752  1111111   1  1122211 1122   122       23


Q ss_pred             CCCcEEEEcCCCCCCCC-------CC----HHHHHHHHHHHH----HHHHHHHhhhCCCeEEEEecCCCCCchHHHHHHH
Q 018512          109 TGMDLVIIPAGVPRKPG-------MT----RDDLFNINAGIV----RTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVF  173 (354)
Q Consensus       109 ~~aDvVIi~ag~~~~~g-------~~----r~d~~~~n~~~~----~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~~~~  173 (354)
                      ...|++|+.||.....+       ..    ....+.-|+...    +.+.+.+.+.  .+.||+++.-....        
T Consensus        78 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~--~g~iv~isS~~~~~--------  147 (281)
T 3zv4_A           78 GKIDTLIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKGYIHAVKACLPALVSS--RGSVVFTISNAGFY--------  147 (281)
T ss_dssp             SCCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEEEECCGGGTS--------
T ss_pred             CCCCEEEECCCcCccccccccCChhhhHHHHHHHHhhhhHHHHHHHHHHHHHHHhc--CCeEEEEecchhcc--------
Confidence            46799999998643211       11    122344565444    4444444443  35556554321111        


Q ss_pred             HHhCCCCCCCEEEeccchHHHHHHHHHHHhCCCCCCCcceEEe
Q 018512          174 KKAGTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVVG  216 (354)
Q Consensus       174 ~~~~~~p~~kviG~t~ld~~r~~~~la~~l~v~~~~v~~~v~G  216 (354)
                          +.+..-.++.+......+.+.+|..++  +. |++..+-
T Consensus       148 ----~~~~~~~Y~asKaa~~~l~~~la~e~~--~~-Irvn~v~  183 (281)
T 3zv4_A          148 ----PNGGGPLYTATKHAVVGLVRQMAFELA--PH-VRVNGVA  183 (281)
T ss_dssp             ----SSSSCHHHHHHHHHHHHHHHHHHHHHT--TT-SEEEEEE
T ss_pred             ----CCCCCchhHHHHHHHHHHHHHHHHHhc--CC-CEEEEEE
Confidence                122222233333334556778888876  33 6554443

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}

Probab=96.88  E-value=0.022  Score=51.74  Aligned_cols=155  Identities=14%  Similarity=0.175  Sum_probs=89.2

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCCCCeEEEEe-CCCcH----------Hhhh
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQL----------ENAL  108 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~~~~v~~~~-~~~d~----------~~al  108 (354)
                      .+.+.|+||++-+|..+|..|+..|.  .|++.|+++  ++..+.++.....  .+..+. +-+|.          .+.+
T Consensus         7 gKvalVTGas~GIG~aiA~~la~~Ga--~Vv~~~~~~~~~~~~~~~i~~~g~--~~~~~~~Dvt~~~~v~~~~~~~~~~~   82 (254)
T 4fn4_A            7 NKVVIVTGAGSGIGRAIAKKFALNDS--IVVAVELLEDRLNQIVQELRGMGK--EVLGVKADVSKKKDVEEFVRRTFETY   82 (254)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHTTC--CEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHcCC--EEEEEECCHHHHHHHHHHHHhcCC--cEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            34788899999999999999999998  899999986  3334455554321  222211 11221          2345


Q ss_pred             CCCcEEEEcCCCCCC--C--CCCH---HHHHHHHH----HHHHHHHHHHhhhCCCeEEEEecCCCCCchHHHHHHHHHhC
Q 018512          109 TGMDLVIIPAGVPRK--P--GMTR---DDLFNINA----GIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAG  177 (354)
Q Consensus       109 ~~aDvVIi~ag~~~~--~--g~~r---~d~~~~n~----~~~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~~~~~~~~  177 (354)
                      -..|++|..||....  +  ..+.   ...+.-|+    ...+..++.|++.. .+.||+++.-....            
T Consensus        83 G~iDiLVNNAGi~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~-~G~IVnisS~~g~~------------  149 (254)
T 4fn4_A           83 SRIDVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLKQG-KGVIVNTASIAGIR------------  149 (254)
T ss_dssp             SCCCEEEECCCCCCTTCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTC------------
T ss_pred             CCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEEechhhcC------------
Confidence            689999999985432  1  1222   22344453    55567777777654 57777775322111            


Q ss_pred             CCCCCCEEEeccchHHHHHHHHHHHhCCCCCCCcceEE
Q 018512          178 TYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVV  215 (354)
Q Consensus       178 ~~p~~kviG~t~ld~~r~~~~la~~l~v~~~~v~~~v~  215 (354)
                      +.|..=.++.+.-.-..|.+.+|..++  +..|++-.+
T Consensus       150 ~~~~~~~Y~asKaal~~ltr~lA~ela--~~gIrVN~V  185 (254)
T 4fn4_A          150 GGFAGAPYTVAKHGLIGLTRSIAAHYG--DQGIRAVAV  185 (254)
T ss_dssp             SSSSCHHHHHHHHHHHHHHHHHHHHHG--GGTEEEEEE
T ss_pred             CCCCChHHHHHHHHHHHHHHHHHHHhh--hhCeEEEEE
Confidence            122211222233233456777887774  455544433

>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*

Probab=96.87  E-value=0.0062  Score=59.74  Aligned_cols=112  Identities=14%  Similarity=0.193  Sum_probs=67.0

Q ss_pred             CCCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCC--C--------------CCeEEEEeCCC
Q 018512           39 GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMD--T--------------GAVVRGFLGQP  102 (354)
Q Consensus        39 ~~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~--~--------------~~~v~~~~~~~  102 (354)
                      ..-..|.+|||. |+||..+|..|+..|+  +|+.+|+++.  .+..|....  .              ...++.   ++
T Consensus         8 ~~~~~~~~ViGl-GyvGlp~A~~La~~G~--~V~~~D~~~~--kv~~L~~g~~pi~epgl~~ll~~~~~~g~l~~---tt   79 (431)
T 3ojo_A            8 HHHGSKLTVVGL-GYIGLPTSIMFAKHGV--DVLGVDINQQ--TIDKLQNGQISIEEPGLQEVYEEVLSSGKLKV---ST   79 (431)
T ss_dssp             ----CEEEEECC-STTHHHHHHHHHHTTC--EEEEECSCHH--HHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEE---ES
T ss_pred             cccCCccEEEee-CHHHHHHHHHHHHCCC--EEEEEECCHH--HHHHHHCCCCCcCCCCHHHHHHhhcccCceEE---eC
Confidence            334569999999 9999999999999998  9999999862  222233211  0              112443   23


Q ss_pred             cHHhhhCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEe-cCCCCCch
Q 018512          103 QLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLI-SNPVNSTV  166 (354)
Q Consensus       103 d~~~al~~aDvVIi~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~-p~a~viv~-tNPv~~~~  166 (354)
                      |    +++||+||++.+.|.......    .-++..+...++.+.++. +..+|+.. |-|.+..-
T Consensus        80 d----~~~aDvvii~VpTp~~~~~~~----~~Dl~~V~~~~~~i~~~l~~g~iVV~~STV~pgtt~  137 (431)
T 3ojo_A           80 T----PEASDVFIIAVPTPNNDDQYR----SCDISLVMRALDSILPFLKKGNTIIVESTIAPKTMD  137 (431)
T ss_dssp             S----CCCCSEEEECCCCCBCSSSSC----BBCCHHHHHHHHHHGGGCCTTEEEEECSCCCTTHHH
T ss_pred             c----hhhCCEEEEEeCCCccccccC----CccHHHHHHHHHHHHHhCCCCCEEEEecCCChhHHH
Confidence            3    468999999988776432000    112334455556666654 45555444 46665543

>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*

Probab=96.83  E-value=0.0027  Score=63.25  Aligned_cols=115  Identities=18%  Similarity=0.135  Sum_probs=72.9

Q ss_pred             CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc-----hhHHHHHhcCCCCCeEEEEeC-CCc---HHhhhCCC
Q 018512           41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT-----PGVTADISHMDTGAVVRGFLG-QPQ---LENALTGM  111 (354)
Q Consensus        41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~-----~g~~~dl~~~~~~~~v~~~~~-~~d---~~~al~~a  111 (354)
                      +..+|.|+||+|.+|..++..|+..|. ..|++++++..     .....++....  ..+..+.. -+|   +.++++.+
T Consensus       225 ~~~~vLITGgtGgIG~~la~~La~~G~-~~vvl~~R~~~~~~~~~~l~~~l~~~g--~~v~~~~~Dv~d~~~v~~~~~~i  301 (486)
T 2fr1_A          225 PTGTVLVTGGTGGVGGQIARWLARRGA-PHLLLVSRSGPDADGAGELVAELEALG--ARTTVAACDVTDRESVRELLGGI  301 (486)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHHTC-SEEEEEESSGGGSTTHHHHHHHHHHTT--CEEEEEECCTTCHHHHHHHHHTS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCC-CEEEEEcCCCCCcHHHHHHHHHHHhcC--CEEEEEEeCCCCHHHHHHHHHHH
Confidence            346899999999999999999998876 25899998752     12233444332  23333211 122   34455554


Q ss_pred             ------cEEEEcCCCCCCC---CCCHH---HHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 018512          112 ------DLVIIPAGVPRKP---GMTRD---DLFNINAGIVRTLCEGIAKCCPNATVNLIS  159 (354)
Q Consensus       112 ------DvVIi~ag~~~~~---g~~r~---d~~~~n~~~~~~i~~~i~~~~p~a~viv~t  159 (354)
                            |.||++||.....   ..+..   ..+.-|+.....+.+.+.+...+. |+++|
T Consensus       302 ~~~g~ld~VIh~AG~~~~~~l~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~~~~-~V~~S  360 (486)
T 2fr1_A          302 GDDVPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTRELDLTA-FVLFS  360 (486)
T ss_dssp             CTTSCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTSCCSE-EEEEE
T ss_pred             HhcCCCcEEEECCccCCCCccccCCHHHHHHHHHHHHHHHHHHHHHhCcCCCCE-EEEEc
Confidence                  9999999976432   12322   345668888888888887654444 44444

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}

Probab=96.82  E-value=0.0069  Score=55.21  Aligned_cols=35  Identities=23%  Similarity=0.423  Sum_probs=31.8

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   78 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~   78 (354)
                      .+++.|+||+|.+|.+++..|+..|.  +|++.|++.
T Consensus        30 ~k~vlVTGas~GIG~aia~~l~~~G~--~Vi~~~r~~   64 (281)
T 3ppi_A           30 GASAIVSGGAGGLGEATVRRLHADGL--GVVIADLAA   64 (281)
T ss_dssp             TEEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESCH
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCC--EEEEEeCCh
Confidence            34799999999999999999999998  899999976

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}

Probab=96.81  E-value=0.0078  Score=54.84  Aligned_cols=156  Identities=11%  Similarity=0.114  Sum_probs=89.9

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCCCCeEEEEe-CCCc---H-------Hhhh
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQ---L-------ENAL  108 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~~~~v~~~~-~~~d---~-------~~al  108 (354)
                      .+.+.|+||++-+|..++..|+..|.  .|++.|+++  ....+.++....  .....+. +-+|   .       .+.+
T Consensus         9 gKvalVTGas~GIG~aia~~la~~Ga--~Vvi~~~~~~~~~~~~~~l~~~g--~~~~~~~~Dv~~~~~v~~~~~~~~~~~   84 (255)
T 4g81_D            9 GKTALVTGSARGLGFAYAEGLAAAGA--RVILNDIRATLLAESVDTLTRKG--YDAHGVAFDVTDELAIEAAFSKLDAEG   84 (255)
T ss_dssp             TCEEEETTCSSHHHHHHHHHHHHTTC--EEEECCSCHHHHHHHHHHHHHTT--CCEEECCCCTTCHHHHHHHHHHHHHTT
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHhcC--CcEEEEEeeCCCHHHHHHHHHHHHHHC
Confidence            34688889999999999999999998  899999986  233344454432  1122211 1111   1       2334


Q ss_pred             CCCcEEEEcCCCCCCCC---CCH---HHHHHHHH----HHHHHHHHHHhhhCCCeEEEEecCCCCCchHHHHHHHHHhCC
Q 018512          109 TGMDLVIIPAGVPRKPG---MTR---DDLFNINA----GIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGT  178 (354)
Q Consensus       109 ~~aDvVIi~ag~~~~~g---~~r---~d~~~~n~----~~~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~~~~~~~~~  178 (354)
                      -..|++|..||......   .+.   ...+.-|+    ...+..++.|.+....+.||++|.-....            +
T Consensus        85 G~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~~G~IVnisS~~~~~------------~  152 (255)
T 4g81_D           85 IHVDILINNAGIQYRKPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNSGGKIINIGSLTSQA------------A  152 (255)
T ss_dssp             CCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTS------------B
T ss_pred             CCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHccCCCEEEEEeehhhcC------------C
Confidence            57899999998754322   222   23344454    45566777776666678888876432211            2


Q ss_pred             CCCCCEEEeccchHHHHHHHHHHHhCCCCCCCcceEE
Q 018512          179 YDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVV  215 (354)
Q Consensus       179 ~p~~kviG~t~ld~~r~~~~la~~l~v~~~~v~~~v~  215 (354)
                      .|..=.++.+.-.-..|.+.+|..++  +..|++-.+
T Consensus       153 ~~~~~~Y~asKaal~~ltr~lA~ela--~~gIrVN~V  187 (255)
T 4g81_D          153 RPTVAPYTAAKGGIKMLTCSMAAEWA--QFNIQTNAI  187 (255)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHHG--GGTEEEEEE
T ss_pred             CCCchhHHHHHHHHHHHHHHHHHHhc--ccCeEEEEE
Confidence            22221233332233456778887775  445544333

>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}

Probab=96.78  E-value=0.001  Score=63.66  Aligned_cols=73  Identities=25%  Similarity=0.282  Sum_probs=45.8

Q ss_pred             CCCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEE-EeCCCcHHhhhCCCcEEEEc
Q 018512           39 GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRG-FLGQPQLENALTGMDLVIIP  117 (354)
Q Consensus        39 ~~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~-~~~~~d~~~al~~aDvVIi~  117 (354)
                      ..+.|||+|+|| |+||+.++..|.. ..  +|.+.|++...  ...+.+..  ..+.. ......+.+.++++|+||.+
T Consensus        13 ~g~~mkilvlGa-G~vG~~~~~~L~~-~~--~v~~~~~~~~~--~~~~~~~~--~~~~~d~~d~~~l~~~~~~~DvVi~~   84 (365)
T 3abi_A           13 EGRHMKVLILGA-GNIGRAIAWDLKD-EF--DVYIGDVNNEN--LEKVKEFA--TPLKVDASNFDKLVEVMKEFELVIGA   84 (365)
T ss_dssp             ---CCEEEEECC-SHHHHHHHHHHTT-TS--EEEEEESCHHH--HHHHTTTS--EEEECCTTCHHHHHHHHTTCSEEEEC
T ss_pred             cCCccEEEEECC-CHHHHHHHHHHhc-CC--CeEEEEcCHHH--HHHHhccC--CcEEEecCCHHHHHHHHhCCCEEEEe
Confidence            445689999999 9999999988864 33  89999987521  11122211  11221 11113456778999999998


Q ss_pred             CC
Q 018512          118 AG  119 (354)
Q Consensus       118 ag  119 (354)
                      ++
T Consensus        85 ~p   86 (365)
T 3abi_A           85 LP   86 (365)
T ss_dssp             CC
T ss_pred             cC
Confidence            64

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...

Probab=96.75  E-value=0.0056  Score=55.56  Aligned_cols=114  Identities=15%  Similarity=0.119  Sum_probs=68.8

Q ss_pred             CCeEEEEcC--CCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEE-eCCCc---HHhhhC------
Q 018512           42 GFKVAILGA--AGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGF-LGQPQ---LENALT------  109 (354)
Q Consensus        42 ~~kI~IiGa--~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~-~~~~d---~~~al~------  109 (354)
                      .+++.|+||  +|.+|..++..|+..|.  +|++.|++.... ..++.+.. ...+..+ .+-+|   .+++++      
T Consensus         7 ~k~vlVTGa~~s~gIG~aia~~l~~~G~--~V~~~~r~~~~~-~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   82 (269)
T 2h7i_A            7 GKRILVSGIITDSSIAFHIARVAQEQGA--QLVLTGFDRLRL-IQRITDRL-PAKAPLLELDVQNEEHLASLAGRVTEAI   82 (269)
T ss_dssp             TCEEEECCCSSTTSHHHHHHHHHHHTTC--EEEEEECSCHHH-HHHHHTTS-SSCCCEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCCCCchHHHHHHHHHHCCC--EEEEEecChHHH-HHHHHHhc-CCCceEEEccCCCHHHHHHHHHHHHHHh
Confidence            357999998  89999999999999997  899999876221 11222211 0111111 11122   223333      


Q ss_pred             ----CCcEEEEcCCCCCC------C--CCCH---HHHHHHHHHHHHHHHHHHhhhC-CCeEEEEec
Q 018512          110 ----GMDLVIIPAGVPRK------P--GMTR---DDLFNINAGIVRTLCEGIAKCC-PNATVNLIS  159 (354)
Q Consensus       110 ----~aDvVIi~ag~~~~------~--g~~r---~d~~~~n~~~~~~i~~~i~~~~-p~a~viv~t  159 (354)
                          ..|++|+.||....      +  ..+.   ...+..|+.....+.+.+.++- +.+.|+++|
T Consensus        83 g~~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~is  148 (269)
T 2h7i_A           83 GAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPGGSIVGMD  148 (269)
T ss_dssp             CTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEE
T ss_pred             CCCCCceEEEECCccCccccccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCeEEEEc
Confidence                78999999986531      1  1222   2345678877777777776543 346666665

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}

Probab=96.74  E-value=0.0024  Score=58.17  Aligned_cols=146  Identities=18%  Similarity=0.188  Sum_probs=78.6

Q ss_pred             CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHh-cCCC-CC-eEEEEeCCCcHHhhhCCCcEEEEc
Q 018512           41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADIS-HMDT-GA-VVRGFLGQPQLENALTGMDLVIIP  117 (354)
Q Consensus        41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~-~~~~-~~-~v~~~~~~~d~~~al~~aDvVIi~  117 (354)
                      +.+++.|+||+|.+|.+++..|+..|.  +|++.|++..... .+.. .+.. .. .+...  -....+.+...|++|+.
T Consensus        27 ~gk~vlVTGas~gIG~aia~~la~~G~--~V~~~~r~~~~~~-~~~~~~~Dv~~~~~~~~~--~~~~~~~~g~iD~lvnn  101 (266)
T 3uxy_A           27 EGKVALVTGAAGGIGGAVVTALRAAGA--RVAVADRAVAGIA-ADLHLPGDLREAAYADGL--PGAVAAGLGRLDIVVNN  101 (266)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTC--EEEECSSCCTTSC-CSEECCCCTTSHHHHHHH--HHHHHHHHSCCCEEEEC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEeCCHHHHH-hhhccCcCCCCHHHHHHH--HHHHHHhcCCCCEEEEC
Confidence            345899999999999999999999998  8999998752100 0000 0000 00 00000  00112334589999999


Q ss_pred             CCCCCCCC---CCH---HHHHHHHHHHHHHHHHH----HhhhCCCeEEEEecCCCCCchHHHHHHHHHhCCCCCCCEEEe
Q 018512          118 AGVPRKPG---MTR---DDLFNINAGIVRTLCEG----IAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV  187 (354)
Q Consensus       118 ag~~~~~g---~~r---~d~~~~n~~~~~~i~~~----i~~~~p~a~viv~tNPv~~~~~~~~~~~~~~~~~p~~kviG~  187 (354)
                      ||......   .+.   ...+..|+.....+.+.    +++.. .+.||++|......            +.|..-.++.
T Consensus       102 Ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~~------------~~~~~~~Y~a  168 (266)
T 3uxy_A          102 AGVISRGRITETTDADWSLSLGVNVEAPFRICRAAIPLMAAAG-GGAIVNVASCWGLR------------PGPGHALYCL  168 (266)
T ss_dssp             CCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCSBTTB------------CCTTBHHHHH
T ss_pred             CCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEECCHHhCC------------CCCCChHHHH
Confidence            98754221   122   23445665555444444    45443 56677766433221            2222223333


Q ss_pred             ccchHHHHHHHHHHHhC
Q 018512          188 TMLDVVRANTFVAEVLG  204 (354)
Q Consensus       188 t~ld~~r~~~~la~~l~  204 (354)
                      +......+.+.++..++
T Consensus       169 sKaa~~~l~~~la~e~~  185 (266)
T 3uxy_A          169 TKAALASLTQCMGMDHA  185 (266)
T ss_dssp             HHHHHHHHHHHHHHHHG
T ss_pred             HHHHHHHHHHHHHHHhh
Confidence            33334456667777763

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}

Probab=96.72  E-value=0.0011  Score=59.46  Aligned_cols=138  Identities=13%  Similarity=0.135  Sum_probs=80.3

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHh-CCCCcEEEEEecCCc-hhHHHHHhcCCCCCeEEEEe-C---CCcHHhhhC-----C
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKI-NPLVSVLHLYDVVNT-PGVTADISHMDTGAVVRGFL-G---QPQLENALT-----G  110 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~-~~~~~ei~L~D~~~~-~g~~~dl~~~~~~~~v~~~~-~---~~d~~~al~-----~  110 (354)
                      ++++.|+||+|.+|.+++..|+. .+.  .|++.|+++. ...           .+..+. +   ..+.+++++     .
T Consensus         4 ~k~vlITGas~gIG~~~a~~l~~~~g~--~v~~~~~~~~~~~~-----------~~~~~~~Dv~~~~~v~~~~~~~~~~~   70 (244)
T 4e4y_A            4 MANYLVTGGSKGIGKAVVELLLQNKNH--TVINIDIQQSFSAE-----------NLKFIKADLTKQQDITNVLDIIKNVS   70 (244)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHTTSTTE--EEEEEESSCCCCCT-----------TEEEEECCTTCHHHHHHHHHHTTTCC
T ss_pred             CCeEEEeCCCChHHHHHHHHHHhcCCc--EEEEeccccccccc-----------cceEEecCcCCHHHHHHHHHHHHhCC
Confidence            45799999999999999999988 566  8899998752 100           011110 1   112222232     7


Q ss_pred             CcEEEEcCCCCCCC---CCC---HHHHHHHHHHHHHHHHHHHhhhCC-CeEEEEecCCCCCchHHHHHHHHHhCCCCCCC
Q 018512          111 MDLVIIPAGVPRKP---GMT---RDDLFNINAGIVRTLCEGIAKCCP-NATVNLISNPVNSTVPIAAEVFKKAGTYDPKK  183 (354)
Q Consensus       111 aDvVIi~ag~~~~~---g~~---r~d~~~~n~~~~~~i~~~i~~~~p-~a~viv~tNPv~~~~~~~~~~~~~~~~~p~~k  183 (354)
                      .|++|+.||.....   ..+   ....+.-|+.....+.+.+...-. .+.||++|......            +.|..-
T Consensus        71 id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~~sS~~~~~------------~~~~~~  138 (244)
T 4e4y_A           71 FDGIFLNAGILIKGSIFDIDIESIKKVLDLNVWSSIYFIKGLENNLKVGASIVFNGSDQCFI------------AKPNSF  138 (244)
T ss_dssp             EEEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHTGGGEEEEEEEEEECCGGGTC------------CCTTBH
T ss_pred             CCEEEECCccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHhccCcEEEEECCHHHcc------------CCCCCc
Confidence            89999999975321   222   234567788888888887766542 35666665322111            222222


Q ss_pred             EEEeccchHHHHHHHHHHHhC
Q 018512          184 LLGVTMLDVVRANTFVAEVLG  204 (354)
Q Consensus       184 viG~t~ld~~r~~~~la~~l~  204 (354)
                      .++.+......+.+.++..++
T Consensus       139 ~Y~asKaa~~~~~~~la~e~~  159 (244)
T 4e4y_A          139 AYTLSKGAIAQMTKSLALDLA  159 (244)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHG
T ss_pred             hhHHHHHHHHHHHHHHHHHHH
Confidence            333333334456677777653

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}

Probab=96.70  E-value=0.0068  Score=54.07  Aligned_cols=141  Identities=12%  Similarity=0.115  Sum_probs=69.7

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCC-C---------cHHhhhCCC
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQ-P---------QLENALTGM  111 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~-~---------d~~~al~~a  111 (354)
                      .+++.|+||+|.+|.+++..|+. +.  .|+++|++...  ..++.+..   .+..+... .         +..+.+...
T Consensus         5 ~k~vlITGas~gIG~~~a~~l~~-g~--~v~~~~r~~~~--~~~~~~~~---~~~~~~~D~~~~~~~~~~~~~~~~~~~i   76 (245)
T 3e9n_A            5 KKIAVVTGATGGMGIEIVKDLSR-DH--IVYALGRNPEH--LAALAEIE---GVEPIESDIVKEVLEEGGVDKLKNLDHV   76 (245)
T ss_dssp             -CEEEEESTTSHHHHHHHHHHTT-TS--EEEEEESCHHH--HHHHHTST---TEEEEECCHHHHHHTSSSCGGGTTCSCC
T ss_pred             CCEEEEEcCCCHHHHHHHHHHhC-CC--eEEEEeCCHHH--HHHHHhhc---CCcceecccchHHHHHHHHHHHHhcCCC
Confidence            35799999999999999999976 54  89999987521  11222211   11111110 0         011223478


Q ss_pred             cEEEEcCCCCCCCC---CC---HHHHHHHHHHH----HHHHHHHHhhhCCCeEEEEecCCCCCchHHHHHHHHHhCCCCC
Q 018512          112 DLVIIPAGVPRKPG---MT---RDDLFNINAGI----VRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDP  181 (354)
Q Consensus       112 DvVIi~ag~~~~~g---~~---r~d~~~~n~~~----~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~~~~~~~~~~p~  181 (354)
                      |+||+.||......   .+   ....+..|+..    .+.+.+.+++..  +.||++|......            +.|.
T Consensus        77 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~--g~iv~isS~~~~~------------~~~~  142 (245)
T 3e9n_A           77 DTLVHAAAVARDTTIEAGSVAEWHAHLDLNVIVPAELSRQLLPALRAAS--GCVIYINSGAGNG------------PHPG  142 (245)
T ss_dssp             SEEEECC----------CHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEEC----------------------
T ss_pred             CEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC--CeEEEEcCccccc------------CCCC
Confidence            99999998753221   11   12334556544    555555555543  5666665432211            1222


Q ss_pred             CCEEEeccchHHHHHHHHHHHhC
Q 018512          182 KKLLGVTMLDVVRANTFVAEVLG  204 (354)
Q Consensus       182 ~kviG~t~ld~~r~~~~la~~l~  204 (354)
                      .-.++.+......+.+.++..++
T Consensus       143 ~~~Y~asK~a~~~~~~~la~e~~  165 (245)
T 3e9n_A          143 NTIYAASKHALRGLADAFRKEEA  165 (245)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHG
T ss_pred             chHHHHHHHHHHHHHHHHHHHhh
Confidence            22344443334456666777654

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}

Probab=96.70  E-value=0.0022  Score=57.86  Aligned_cols=114  Identities=15%  Similarity=0.092  Sum_probs=66.2

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEe-CCCc---HHhhh------CCC
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFL-GQPQ---LENAL------TGM  111 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~-~~~d---~~~al------~~a  111 (354)
                      .+++.|+||+|.+|.+++..|+..|.  +|++.|++. .....++.     ..+..+. +-+|   .++++      ...
T Consensus         9 ~k~vlVTGas~gIG~aia~~l~~~G~--~V~~~~r~~-~~~~~~~~-----~~~~~~~~D~~~~~~v~~~~~~~~~~g~i   80 (257)
T 3tl3_A            9 DAVAVVTGGASGLGLATTKRLLDAGA--QVVVLDIRG-EDVVADLG-----DRARFAAADVTDEAAVASALDLAETMGTL   80 (257)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHHTC--EEEEEESSC-HHHHHHTC-----TTEEEEECCTTCHHHHHHHHHHHHHHSCE
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCC--EEEEEeCch-HHHHHhcC-----CceEEEECCCCCHHHHHHHHHHHHHhCCC
Confidence            35799999999999999999999998  899999854 22222221     1122211 1112   22223      389


Q ss_pred             cEEEEcCCCCCCC-------CCC---HHHHHHHHHHHHHHHHHHHhhh-----------CCCeEEEEecCCCC
Q 018512          112 DLVIIPAGVPRKP-------GMT---RDDLFNINAGIVRTLCEGIAKC-----------CPNATVNLISNPVN  163 (354)
Q Consensus       112 DvVIi~ag~~~~~-------g~~---r~d~~~~n~~~~~~i~~~i~~~-----------~p~a~viv~tNPv~  163 (354)
                      |++|+.||.....       ..+   ....+.-|+.....+.+.+..+           ...+.||++|.-..
T Consensus        81 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~  153 (257)
T 3tl3_A           81 RIVVNCAGTGNAIRVLSRDGVFSLAAFRKIVDINLVGSFNVLRLAAERIAKTEPVGPNAEERGVIINTASVAA  153 (257)
T ss_dssp             EEEEECGGGSHHHHHHHHTCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCC--CCCCSEEEEEECCCC-
T ss_pred             CEEEECCCCCCCcccccccccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccccccCCCcEEEEEcchhh
Confidence            9999999864210       122   2344566765555444444332           33567777765443

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*

Probab=96.68  E-value=0.022  Score=53.31  Aligned_cols=156  Identities=14%  Similarity=0.169  Sum_probs=83.5

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecC---------C--chhHHHHHhcCCCCCeEEEEeCCCcHHh----
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVV---------N--TPGVTADISHMDTGAVVRGFLGQPQLEN----  106 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~---------~--~~g~~~dl~~~~~~~~v~~~~~~~d~~~----  106 (354)
                      .+++.|+||+|.+|..++..|+..|.  +|++.|+.         .  ......++..... ..+-......+.++    
T Consensus         9 gk~~lVTGas~GIG~~~a~~La~~Ga--~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~~~-~~~~D~~~~~~~~~~~~~   85 (319)
T 1gz6_A            9 GRVVLVTGAGGGLGRAYALAFAERGA--LVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGG-KAVANYDSVEAGEKLVKT   85 (319)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHHTTC--EEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTC-EEEEECCCGGGHHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEcCCcccccccCCHHHHHHHHHHHHhhCC-eEEEeCCCHHHHHHHHHH
Confidence            45899999999999999999999997  89998863         2  1222233432211 11111111112212    


Q ss_pred             ---hhCCCcEEEEcCCCCCCCC---CCH---HHHHHHHHHHH----HHHHHHHhhhCCCeEEEEecCCCCCchHHHHHHH
Q 018512          107 ---ALTGMDLVIIPAGVPRKPG---MTR---DDLFNINAGIV----RTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVF  173 (354)
Q Consensus       107 ---al~~aDvVIi~ag~~~~~g---~~r---~d~~~~n~~~~----~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~~~~  173 (354)
                         .+...|++|+.||......   .+.   ...+.-|+...    +.+.+.+++.. .+.||++|...           
T Consensus        86 ~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~grIV~vsS~~-----------  153 (319)
T 1gz6_A           86 ALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQN-YGRIIMTASAS-----------  153 (319)
T ss_dssp             HHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-CEEEEEECCHH-----------
T ss_pred             HHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEECChh-----------
Confidence               2347899999999754321   222   23455666554    44444445443 46666665311           


Q ss_pred             HHhCCCCCCCEEEeccchHHHHHHHHHHHhCCCCCCCcceEE
Q 018512          174 KKAGTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVV  215 (354)
Q Consensus       174 ~~~~~~p~~kviG~t~ld~~r~~~~la~~l~v~~~~v~~~v~  215 (354)
                      ... +.+..-.++.+......+.+.++..+.  +..|++..+
T Consensus       154 ~~~-~~~~~~~Y~aSK~a~~~~~~~la~el~--~~gI~vn~v  192 (319)
T 1gz6_A          154 GIY-GNFGQANYSAAKLGLLGLANTLVIEGR--KNNIHCNTI  192 (319)
T ss_dssp             HHH-CCTTCHHHHHHHHHHHHHHHHHHHHTG--GGTEEEEEE
T ss_pred             hcc-CCCCCHHHHHHHHHHHHHHHHHHHHhc--ccCEEEEEE
Confidence            011 222222334444444556667777653  334444433

>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}

Probab=96.67  E-value=0.0077  Score=57.21  Aligned_cols=62  Identities=16%  Similarity=0.261  Sum_probs=47.9

Q ss_pred             CCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcC
Q 018512           40 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA  118 (354)
Q Consensus        40 ~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~a  118 (354)
                      -..++|.|||. |.+|+.+|..+...|.  +|..+|++...       ...    ...   ..++++.+++||+|+++.
T Consensus       169 l~gktiGIIGl-G~IG~~vA~~l~~~G~--~V~~~dr~~~~-------~~~----~~~---~~sl~ell~~aDvVil~v  230 (340)
T 4dgs_A          169 PKGKRIGVLGL-GQIGRALASRAEAFGM--SVRYWNRSTLS-------GVD----WIA---HQSPVDLARDSDVLAVCV  230 (340)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHTTTC--EEEEECSSCCT-------TSC----CEE---CSSHHHHHHTCSEEEECC
T ss_pred             ccCCEEEEECC-CHHHHHHHHHHHHCCC--EEEEEcCCccc-------ccC----cee---cCCHHHHHhcCCEEEEeC
Confidence            44679999999 9999999999987777  89999987532       011    111   246789999999999974

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}

Probab=96.67  E-value=0.0083  Score=56.36  Aligned_cols=115  Identities=17%  Similarity=0.141  Sum_probs=65.3

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC---chhHHHHHhcC--CCCCeEEEEe-CCCc---HHhhhC----
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN---TPGVTADISHM--DTGAVVRGFL-GQPQ---LENALT----  109 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~---~~g~~~dl~~~--~~~~~v~~~~-~~~d---~~~al~----  109 (354)
                      ++|.|+||+|.+|.+++..|+..|.  +|++.+++.   ......++...  .....+..+. +-+|   .+++++    
T Consensus         6 k~vlVTGas~GIG~aia~~L~~~G~--~V~~~~r~~~~r~~~~~~~l~~~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~~~   83 (324)
T 3u9l_A            6 KIILITGASSGFGRLTAEALAGAGH--RVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLELDVQSQVSVDRAIDQIIG   83 (324)
T ss_dssp             CEEEESSCSSHHHHHHHHHHHHTTC--EEEEEESCTTTTTHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCC--EEEEecCcccccCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Confidence            4799999999999999999999998  888877753   11111111110  0012222221 1122   233443    


Q ss_pred             ---CCcEEEEcCCCCCCC---CCC---HHHHHHHHHHHHHHHHHHH----hhhCCCeEEEEecC
Q 018512          110 ---GMDLVIIPAGVPRKP---GMT---RDDLFNINAGIVRTLCEGI----AKCCPNATVNLISN  160 (354)
Q Consensus       110 ---~aDvVIi~ag~~~~~---g~~---r~d~~~~n~~~~~~i~~~i----~~~~p~a~viv~tN  160 (354)
                         +.|+||+.||.....   ..+   ....+.-|+.....+.+.+    ++.. .+.||++|.
T Consensus        84 ~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~a~lp~m~~~~-~g~iV~isS  146 (324)
T 3u9l_A           84 EDGRIDVLIHNAGHMVFGPAEAFTPEQFAELYDINVLSTQRVNRAALPHMRRQK-HGLLIWISS  146 (324)
T ss_dssp             HHSCCSEEEECCCCCBCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECC
T ss_pred             HcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEEec
Confidence               899999999865321   112   2334566766555555544    5443 456666653

>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*

Probab=96.65  E-value=0.016  Score=56.73  Aligned_cols=94  Identities=14%  Similarity=0.085  Sum_probs=63.3

Q ss_pred             CCCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcC
Q 018512           39 GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA  118 (354)
Q Consensus        39 ~~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~a  118 (354)
                      ....++|+|+|. |.+|..+|..|..-|.  +|+.+|+++.....  ......    ..    .++++++++||+|+.+.
T Consensus       208 ~L~GktVgIiG~-G~IG~~vA~~Lka~Ga--~Viv~D~~p~~a~~--A~~~G~----~~----~sL~eal~~ADVVilt~  274 (436)
T 3h9u_A          208 MIAGKTACVCGY-GDVGKGCAAALRGFGA--RVVVTEVDPINALQ--AAMEGY----QV----LLVEDVVEEAHIFVTTT  274 (436)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTC--EEEEECSCHHHHHH--HHHTTC----EE----CCHHHHTTTCSEEEECS
T ss_pred             cccCCEEEEEee-CHHHHHHHHHHHHCCC--EEEEECCChhhhHH--HHHhCC----ee----cCHHHHHhhCCEEEECC
Confidence            345679999999 9999999999988786  89999997622111  111111    11    25789999999999875


Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCC
Q 018512          119 GVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPV  162 (354)
Q Consensus       119 g~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv  162 (354)
                      +...--+.                 +.+....|+++|++++++.
T Consensus       275 gt~~iI~~-----------------e~l~~MK~gAIVINvgRg~  301 (436)
T 3h9u_A          275 GNDDIITS-----------------EHFPRMRDDAIVCNIGHFD  301 (436)
T ss_dssp             SCSCSBCT-----------------TTGGGCCTTEEEEECSSSG
T ss_pred             CCcCccCH-----------------HHHhhcCCCcEEEEeCCCC
Confidence            43321110                 1233345789999998764

>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A*

Probab=96.65  E-value=0.0031  Score=59.77  Aligned_cols=63  Identities=16%  Similarity=0.274  Sum_probs=47.7

Q ss_pred             CCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcCC
Q 018512           40 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG  119 (354)
Q Consensus        40 ~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~ag  119 (354)
                      -..++|+|||. |.+|+.+|..+...|.  +|..+|++....     .  .    ...   ..++++.+++||+|+++..
T Consensus       162 l~g~~vgIIG~-G~iG~~vA~~l~~~G~--~V~~~dr~~~~~-----~--g----~~~---~~~l~ell~~aDvVil~vP  224 (333)
T 3ba1_A          162 FSGKRVGIIGL-GRIGLAVAERAEAFDC--PISYFSRSKKPN-----T--N----YTY---YGSVVELASNSDILVVACP  224 (333)
T ss_dssp             CTTCCEEEECC-SHHHHHHHHHHHTTTC--CEEEECSSCCTT-----C--C----SEE---ESCHHHHHHTCSEEEECSC
T ss_pred             cCCCEEEEECC-CHHHHHHHHHHHHCCC--EEEEECCCchhc-----c--C----cee---cCCHHHHHhcCCEEEEecC
Confidence            34578999999 9999999999988776  899999875211     0  1    111   1367788999999999853

>2yjz_A Metalloreductase steap4; oxidoreductase, metabolic syndrome; HET: NAP; 2.20A {Rattus norvegicus}

Probab=95.67  E-value=0.0003  Score=61.89  Aligned_cols=64  Identities=14%  Similarity=0.138  Sum_probs=45.7

Q ss_pred             CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcC
Q 018512           41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA  118 (354)
Q Consensus        41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~a  118 (354)
                      ..|||+|||+ |.+|+.++..|...+.  +|.++|+++.   ...+...    .+..   . +..++++++|+||++.
T Consensus        18 ~~~~I~iIG~-G~mG~~la~~L~~~G~--~V~~~~r~~~---~~~~~~~----g~~~---~-~~~~~~~~aDvVilav   81 (201)
T 2yjz_A           18 KQGVVCIFGT-GDFGKSLGLKMLQCGY--SVVFGSRNPQ---VSSLLPR----GAEV---L-CYSEAASRSDVIVLAV   81 (201)
Confidence            4579999998 9999999999988776  7899998642   1112111    1111   1 4457789999999984

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}

Probab=96.61  E-value=0.0066  Score=54.72  Aligned_cols=35  Identities=20%  Similarity=0.242  Sum_probs=31.6

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   78 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~   78 (354)
                      .+++.|+||+|.+|..++..|+..|.  +|++.|++.
T Consensus         5 ~k~vlVTGas~gIG~~ia~~l~~~G~--~V~~~~r~~   39 (260)
T 2qq5_A            5 GQVCVVTGASRGIGRGIALQLCKAGA--TVYITGRHL   39 (260)
T ss_dssp             TCEEEESSTTSHHHHHHHHHHHHTTC--EEEEEESCH
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCC--EEEEEeCCH
Confidence            35799999999999999999999997  899999875

>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*

Probab=96.61  E-value=0.066  Score=48.35  Aligned_cols=151  Identities=17%  Similarity=0.160  Sum_probs=85.0

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEe-CCCcH----------HhhhCCC
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFL-GQPQL----------ENALTGM  111 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~-~~~d~----------~~al~~a  111 (354)
                      ++|.|+||++-+|..++..|+..|.  .|++.|+++..  ..++....  ..+..+. +-+|.          .+.+...
T Consensus         3 K~vlVTGas~GIG~aia~~la~~Ga--~V~~~~~~~~~--~~~~~~~~--~~~~~~~~Dv~~~~~v~~~v~~~~~~~g~i   76 (247)
T 3ged_A            3 RGVIVTGGGHGIGKQICLDFLEAGD--KVCFIDIDEKR--SADFAKER--PNLFYFHGDVADPLTLKKFVEYAMEKLQRI   76 (247)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTC--EEEEEESCHHH--HHHHHTTC--TTEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             CEEEEecCCCHHHHHHHHHHHHCCC--EEEEEeCCHHH--HHHHHHhc--CCEEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            3689999999999999999999998  99999997521  12233221  1111111 11121          2445789


Q ss_pred             cEEEEcCCCCCCC---CCCH---HHHHHHHHHH----HHHHHHHHhhhCCCeEEEEecCCCCCchHHHHHHHHHhCCCCC
Q 018512          112 DLVIIPAGVPRKP---GMTR---DDLFNINAGI----VRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDP  181 (354)
Q Consensus       112 DvVIi~ag~~~~~---g~~r---~d~~~~n~~~----~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~~~~~~~~~~p~  181 (354)
                      |++|..||.....   ..+.   ...+.-|+..    .+...+.|.+.  ++.||+++.-...            .+.|.
T Consensus        77 DiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~--~G~IInisS~~~~------------~~~~~  142 (247)
T 3ged_A           77 DVLVNNACRGSKGILSSLLYEEFDYILSVGLKAPYELSRLCRDELIKN--KGRIINIASTRAF------------QSEPD  142 (247)
T ss_dssp             CEEEECCCCCCCCGGGTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT--TCEEEEECCGGGT------------SCCTT
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhc--CCcEEEEeecccc------------cCCCC
Confidence            9999999865432   1222   2334455443    44555555543  4667776532211            12222


Q ss_pred             CCEEEeccchHHHHHHHHHHHhCCCCCCCcceEEe
Q 018512          182 KKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVVG  216 (354)
Q Consensus       182 ~kviG~t~ld~~r~~~~la~~l~v~~~~v~~~v~G  216 (354)
                      .-.++.+.-.-..|.+.+|..++  | .|++-.+-
T Consensus       143 ~~~Y~asKaal~~ltk~lA~ela--~-~IrVN~I~  174 (247)
T 3ged_A          143 SEAYASAKGGIVALTHALAMSLG--P-DVLVNCIA  174 (247)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHT--T-TSEEEEEE
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHC--C-CCEEEEEe
Confidence            22233333334457788888886  4 56544443

>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}

Probab=96.56  E-value=0.0053  Score=56.54  Aligned_cols=152  Identities=16%  Similarity=0.191  Sum_probs=80.0

Q ss_pred             CCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEE-EEecCCchhHHHHHhcCCC-CCeEEEEeCCCcHHhhhCCCcEEEEc
Q 018512           40 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLH-LYDVVNTPGVTADISHMDT-GAVVRGFLGQPQLENALTGMDLVIIP  117 (354)
Q Consensus        40 ~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~-L~D~~~~~g~~~dl~~~~~-~~~v~~~~~~~d~~~al~~aDvVIi~  117 (354)
                      .+++||+|+||+|.+|+.++..+...+-. +|+ .+|.+.....-.|+..... ...+.   .++|+++.++++|+||..
T Consensus         5 M~mikV~V~Ga~G~MG~~i~~~l~~~~~~-eLv~~~d~~~~~~~G~d~gel~g~~~gv~---v~~dl~~ll~~~DVVIDf   80 (272)
T 4f3y_A            5 MSSMKIAIAGASGRMGRMLIEAVLAAPDA-TLVGALDRTGSPQLGQDAGAFLGKQTGVA---LTDDIERVCAEADYLIDF   80 (272)
T ss_dssp             -CCEEEEESSTTSHHHHHHHHHHHHCTTE-EEEEEBCCTTCTTTTSBTTTTTTCCCSCB---CBCCHHHHHHHCSEEEEC
T ss_pred             ccccEEEEECCCCHHHHHHHHHHHhCCCC-EEEEEEEecCcccccccHHHHhCCCCCce---ecCCHHHHhcCCCEEEEc
Confidence            45689999998899999999988876543 554 4787641101112222111 11222   235788888999999986


Q ss_pred             CCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCCchHHHHHHHHHhCCCCCCCEEEec-cch---HH
Q 018512          118 AGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVT-MLD---VV  193 (354)
Q Consensus       118 ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~~~~~~~~~~p~~kviG~t-~ld---~~  193 (354)
                      .. |               ....+.++.+.+.+.+  +++-| + +...... +.+.+...-- .-+++-. .+.   -.
T Consensus        81 T~-p---------------~a~~~~~~~al~~G~~--vVigT-T-G~s~~~~-~~L~~aa~~~-~vv~a~N~s~Gv~l~~  138 (272)
T 4f3y_A           81 TL-P---------------EGTLVHLDAALRHDVK--LVIGT-T-GFSEPQK-AQLRAAGEKI-ALVFSANMSVGVNVTM  138 (272)
T ss_dssp             SC-H---------------HHHHHHHHHHHHHTCE--EEECC-C-CCCHHHH-HHHHHHTTTS-EEEECSCCCHHHHHHH
T ss_pred             CC-H---------------HHHHHHHHHHHHcCCC--EEEEC-C-CCCHHHH-HHHHHHhccC-CEEEECCCCHHHHHHH
Confidence            31 1               1233444555555443  22223 2 1111111 1233332200 0122221 222   23


Q ss_pred             HHHHHHHHHhCCCCCCCcceEEeecCC
Q 018512          194 RANTFVAEVLGLDPRDVDVPVVGGHAG  220 (354)
Q Consensus       194 r~~~~la~~l~v~~~~v~~~v~G~hg~  220 (354)
                      +|....|+.|+   .+.++.|+=-|+.
T Consensus       139 ~~~~~aa~~l~---~~~diei~E~HH~  162 (272)
T 4f3y_A          139 KLLEFAAKQFA---QGYDIEIIEAHHR  162 (272)
T ss_dssp             HHHHHHHHHTS---SSCEEEEEEEECT
T ss_pred             HHHHHHHHhcC---cCCCEEEEEecCC
Confidence            56677778876   4567888888877

>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}

Probab=96.56  E-value=0.012  Score=58.86  Aligned_cols=116  Identities=18%  Similarity=0.124  Sum_probs=71.9

Q ss_pred             CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc-----hhHHHHHhcCCCCCeEEEEe-CCCc---HHhhhCC-
Q 018512           41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT-----PGVTADISHMDTGAVVRGFL-GQPQ---LENALTG-  110 (354)
Q Consensus        41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~-----~g~~~dl~~~~~~~~v~~~~-~~~d---~~~al~~-  110 (354)
                      +..+|.|+||+|.+|..++..|+..|.. .|++.+++..     .....++....  ..+..+. +-+|   +.+++++ 
T Consensus       258 ~~~~vLITGgtGgIG~~lA~~La~~G~~-~vvl~~R~~~~~~~~~~l~~~l~~~g--~~v~~~~~Dvtd~~~v~~~~~~~  334 (511)
T 2z5l_A          258 PSGTVLITGGMGAIGRRLARRLAAEGAE-RLVLTSRRGPEAPGAAELAEELRGHG--CEVVHAACDVAERDALAALVTAY  334 (511)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHTTCS-EEEEEESSGGGSTTHHHHHHHHHTTT--CEEEEEECCSSCHHHHHHHHHHS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCc-EEEEEecCCcccHHHHHHHHHHHhcC--CEEEEEEeCCCCHHHHHHHHhcC
Confidence            3468999999999999999999888762 5899988751     22233444332  2333321 1123   3344443 


Q ss_pred             -CcEEEEcCCCCCCC---CCCH---HHHHHHHHHHHHHHHHHHhhh-CCCeEEEEec
Q 018512          111 -MDLVIIPAGVPRKP---GMTR---DDLFNINAGIVRTLCEGIAKC-CPNATVNLIS  159 (354)
Q Consensus       111 -aDvVIi~ag~~~~~---g~~r---~d~~~~n~~~~~~i~~~i~~~-~p~a~viv~t  159 (354)
                       .|+||++||.....   ..+.   ...+.-|+.....+.+.+... ..+.+|++.|
T Consensus       335 ~ld~VVh~AGv~~~~~~~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~~~~~~V~~SS  391 (511)
T 2z5l_A          335 PPNAVFHTAGILDDAVIDTLSPESFETVRGAKVCGAELLHQLTADIKGLDAFVLFSS  391 (511)
T ss_dssp             CCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHHHHHHHHHHHTSSCTTCCCEEEEEE
T ss_pred             CCcEEEECCcccCCcccccCCHHHHHHHHHHHHHHHHHHHHHHhhccCCCEEEEEeC
Confidence             89999999975432   1222   234566888888888777654 3344444433

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*

Probab=96.55  E-value=0.0053  Score=56.54  Aligned_cols=79  Identities=15%  Similarity=0.163  Sum_probs=51.7

Q ss_pred             CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCCCCeEEE-EeCCCcHHhhhCCCcEEEEc
Q 018512           41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRG-FLGQPQLENALTGMDLVIIP  117 (354)
Q Consensus        41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~~~~v~~-~~~~~d~~~al~~aDvVIi~  117 (354)
                      +.+++.|+||+|.+|.+++..|+..|.  +|+++|++.  .+..+.++........+.. .....+++++++++|+||.+
T Consensus       118 ~gk~vlVtGaaGGiG~aia~~L~~~G~--~V~i~~R~~~~~~~l~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~DvlVn~  195 (287)
T 1lu9_A          118 KGKKAVVLAGTGPVGMRSAALLAGEGA--EVVLCGRKLDKAQAAADSVNKRFKVNVTAAETADDASRAEAVKGAHFVFTA  195 (287)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTC--EEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCSHHHHHHHTTTCSEEEEC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCcC--EEEEEECCHHHHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHhCCEEEEC
Confidence            446899999779999999999999987  799999975  2223333322100011111 11112346778899999999


Q ss_pred             CCCC
Q 018512          118 AGVP  121 (354)
Q Consensus       118 ag~~  121 (354)
                      +|..
T Consensus       196 ag~g  199 (287)
T 1lu9_A          196 GAIG  199 (287)
T ss_dssp             CCTT
T ss_pred             CCcc
Confidence            8754

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}

Probab=96.47  E-value=0.031  Score=51.32  Aligned_cols=169  Identities=16%  Similarity=0.112  Sum_probs=89.5

Q ss_pred             cchhhhhhhhcccCCCCCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCCCCeEEEEeCC
Q 018512           24 QENSCLRQAKCRAKGGAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLGQ  101 (354)
Q Consensus        24 ~~~~~~~~~~~~~~~~~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~~~~v~~~~~~  101 (354)
                      ..|.+|.....| +   +.+.+.|+||++-+|..+|..|+..|.  .|++.|+++  ++..+.++....  ..+..  +-
T Consensus        15 ~~n~~~~~Ms~r-L---~gKvalVTGas~GIG~aiA~~la~~Ga--~V~i~~r~~~~l~~~~~~~g~~~--~~~~~--Dv   84 (273)
T 4fgs_A           15 TENLYFQSMTQR-L---NAKIAVITGATSGIGLAAAKRFVAEGA--RVFITGRRKDVLDAAIAEIGGGA--VGIQA--DS   84 (273)
T ss_dssp             ----------CT-T---TTCEEEEESCSSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHCTTC--EEEEC--CT
T ss_pred             ccccchhhhcch-h---CCCEEEEeCcCCHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHcCCCe--EEEEe--cC
Confidence            667777655433 2   234678889999999999999999998  899999976  333344443211  01111  11


Q ss_pred             Cc---H-------HhhhCCCcEEEEcCCCCCCC---CCC---HHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecCCCCC
Q 018512          102 PQ---L-------ENALTGMDLVIIPAGVPRKP---GMT---RDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNS  164 (354)
Q Consensus       102 ~d---~-------~~al~~aDvVIi~ag~~~~~---g~~---r~d~~~~n~~~~~~i~~~i~~~~-p~a~viv~tNPv~~  164 (354)
                      +|   .       .+.+-..|++|..||.....   ..+   ....+.-|+.....+++....+- ..+.||+++.-...
T Consensus        85 ~~~~~v~~~~~~~~~~~G~iDiLVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~G~IInisS~~~~  164 (273)
T 4fgs_A           85 ANLAELDRLYEKVKAEAGRIDVLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARGSSVVLTGSTAGS  164 (273)
T ss_dssp             TCHHHHHHHHHHHHHHHSCEEEEEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGGG
T ss_pred             CCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCeEEEEeehhhc
Confidence            12   1       23455789999999864321   122   33445667666666665555443 34566666532111


Q ss_pred             chHHHHHHHHHhCCCCCCCEEEeccchHHHHHHHHHHHhCCCCCCCcceEEe
Q 018512          165 TVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVVG  216 (354)
Q Consensus       165 ~~~~~~~~~~~~~~~p~~kviG~t~ld~~r~~~~la~~l~v~~~~v~~~v~G  216 (354)
                                  .+.|..-.++.+.-.-..|.+.+|..++  +..|++-.+-
T Consensus       165 ------------~~~~~~~~Y~asKaav~~ltr~lA~Ela--~~gIrVN~V~  202 (273)
T 4fgs_A          165 ------------TGTPAFSVYAASKAALRSFARNWILDLK--DRGIRINTLS  202 (273)
T ss_dssp             ------------SCCTTCHHHHHHHHHHHHHHHHHHHHTT--TSCEEEEEEE
T ss_pred             ------------cCCCCchHHHHHHHHHHHHHHHHHHHhc--ccCeEEEEEe
Confidence                        1233222233333333457788888875  5566544443

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A

Probab=96.41  E-value=0.0071  Score=59.70  Aligned_cols=116  Identities=20%  Similarity=0.282  Sum_probs=70.3

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHh-cCCCCCeEEE-EeCCCcHHhhh-------CC-C
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADIS-HMDTGAVVRG-FLGQPQLENAL-------TG-M  111 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~-~~~~~~~v~~-~~~~~d~~~al-------~~-a  111 (354)
                      ...+.|+||+|.+|..++..|+..|.  .|+++|++.......++. .... ..+.. +....+.++.+       .+ .
T Consensus       213 gk~~LVTGgsgGIG~aiA~~La~~Ga--~Vvl~~r~~~~~~l~~~~~~~~~-~~~~~Dvtd~~~v~~~~~~~~~~~g~~i  289 (454)
T 3u0b_A          213 GKVAVVTGAARGIGATIAEVFARDGA--TVVAIDVDGAAEDLKRVADKVGG-TALTLDVTADDAVDKITAHVTEHHGGKV  289 (454)
T ss_dssp             TCEEEESSCSSHHHHHHHHHHHHTTC--EEEEEECGGGHHHHHHHHHHHTC-EEEECCTTSTTHHHHHHHHHHHHSTTCC
T ss_pred             CCEEEEeCCchHHHHHHHHHHHHCCC--EEEEEeCCccHHHHHHHHHHcCC-eEEEEecCCHHHHHHHHHHHHHHcCCCc
Confidence            45799999999999999999999987  899999865221111111 1110 00111 11112222222       24 9


Q ss_pred             cEEEEcCCCCCCC---CCCH---HHHHHHHHHHHHHHHHHHhhhC---CCeEEEEecC
Q 018512          112 DLVIIPAGVPRKP---GMTR---DDLFNINAGIVRTLCEGIAKCC---PNATVNLISN  160 (354)
Q Consensus       112 DvVIi~ag~~~~~---g~~r---~d~~~~n~~~~~~i~~~i~~~~---p~a~viv~tN  160 (354)
                      |+||++||.....   .++.   ...+.-|+.....+.+.+....   +.+.||++|.
T Consensus       290 d~lV~nAGv~~~~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~g~iV~iSS  347 (454)
T 3u0b_A          290 DILVNNAGITRDKLLANMDEKRWDAVIAVNLLAPQRLTEGLVGNGTIGEGGRVIGLSS  347 (454)
T ss_dssp             SEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHTTSSCTTCEEEEECC
T ss_pred             eEEEECCcccCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEEeC
Confidence            9999999976432   1232   3346678888888888776552   4566777663

>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*

Probab=96.38  E-value=0.02  Score=55.86  Aligned_cols=93  Identities=15%  Similarity=0.191  Sum_probs=62.0

Q ss_pred             CCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchh-HHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcC
Q 018512           40 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPG-VTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA  118 (354)
Q Consensus        40 ~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g-~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~a  118 (354)
                      ....+|+|+|. |.+|..++..+...|.  +|+.+|+++... .+.  .. ..    ..    .++++++++||+||.+.
T Consensus       218 L~GktV~ViG~-G~IGk~vA~~Lra~Ga--~Viv~D~dp~ra~~A~--~~-G~----~v----~~Leeal~~ADIVi~at  283 (435)
T 3gvp_A          218 FGGKQVVVCGY-GEVGKGCCAALKAMGS--IVYVTEIDPICALQAC--MD-GF----RL----VKLNEVIRQVDIVITCT  283 (435)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTC--EEEEECSCHHHHHHHH--HT-TC----EE----CCHHHHTTTCSEEEECS
T ss_pred             ecCCEEEEEee-CHHHHHHHHHHHHCCC--EEEEEeCChhhhHHHH--Hc-CC----Ee----ccHHHHHhcCCEEEECC
Confidence            34569999999 9999999999988777  899999976221 111  11 11    11    24688999999999974


Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCC
Q 018512          119 GVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVN  163 (354)
Q Consensus       119 g~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv~  163 (354)
                      |.+.   .-.           .+..+   ...|.++|++++.+..
T Consensus       284 gt~~---lI~-----------~e~l~---~MK~gailINvgrg~~  311 (435)
T 3gvp_A          284 GNKN---VVT-----------REHLD---RMKNSCIVCNMGHSNT  311 (435)
T ss_dssp             SCSC---SBC-----------HHHHH---HSCTTEEEEECSSTTT
T ss_pred             CCcc---cCC-----------HHHHH---hcCCCcEEEEecCCCc
Confidence            4331   111           12222   2357899999986643

>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}

Probab=96.37  E-value=0.011  Score=52.78  Aligned_cols=72  Identities=11%  Similarity=0.087  Sum_probs=48.6

Q ss_pred             CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcCCC
Q 018512           41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGV  120 (354)
Q Consensus        41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~ag~  120 (354)
                      +.++|.|+|| |.+|...+..|+..|.  +|.++|.+... ...++....   .+......-+ ++.+.++|+||.+.+.
T Consensus        30 ~gk~VLVVGg-G~va~~ka~~Ll~~GA--~VtVvap~~~~-~l~~l~~~~---~i~~i~~~~~-~~dL~~adLVIaAT~d  101 (223)
T 3dfz_A           30 KGRSVLVVGG-GTIATRRIKGFLQEGA--AITVVAPTVSA-EINEWEAKG---QLRVKRKKVG-EEDLLNVFFIVVATND  101 (223)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHGGGCC--CEEEECSSCCH-HHHHHHHTT---SCEEECSCCC-GGGSSSCSEEEECCCC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCC--EEEEECCCCCH-HHHHHHHcC---CcEEEECCCC-HhHhCCCCEEEECCCC
Confidence            3458999999 9999999999998887  89999976432 223343322   1222222222 4668999999987543

>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A

Probab=96.36  E-value=0.006  Score=58.23  Aligned_cols=100  Identities=21%  Similarity=0.269  Sum_probs=64.4

Q ss_pred             CCCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC-chhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEc
Q 018512           39 GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN-TPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIP  117 (354)
Q Consensus        39 ~~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~-~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~  117 (354)
                      ....++|.|||. |.+|+.+|..+..-|.  +|+.+|++. ......++.       +..   ..++++.++.||+|+++
T Consensus       161 ~l~gktvGIIG~-G~IG~~vA~~l~~~G~--~V~~~dr~~~~~~~~~~~g-------~~~---~~~l~ell~~aDvV~l~  227 (351)
T 3jtm_A          161 DLEGKTIGTVGA-GRIGKLLLQRLKPFGC--NLLYHDRLQMAPELEKETG-------AKF---VEDLNEMLPKCDVIVIN  227 (351)
T ss_dssp             CSTTCEEEEECC-SHHHHHHHHHHGGGCC--EEEEECSSCCCHHHHHHHC-------CEE---CSCHHHHGGGCSEEEEC
T ss_pred             cccCCEEeEEEe-CHHHHHHHHHHHHCCC--EEEEeCCCccCHHHHHhCC-------CeE---cCCHHHHHhcCCEEEEC
Confidence            345679999999 9999999999987777  899999875 222222221       111   23678899999999998


Q ss_pred             CCCC-CCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec--CCCCCc
Q 018512          118 AGVP-RKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS--NPVNST  165 (354)
Q Consensus       118 ag~~-~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~t--NPv~~~  165 (354)
                      .... ...++-       |    .+.   +....|++++|+++  .++|.-
T Consensus       228 ~Plt~~t~~li-------~----~~~---l~~mk~gailIN~aRG~~vde~  264 (351)
T 3jtm_A          228 MPLTEKTRGMF-------N----KEL---IGKLKKGVLIVNNARGAIMERQ  264 (351)
T ss_dssp             SCCCTTTTTCB-------S----HHH---HHHSCTTEEEEECSCGGGBCHH
T ss_pred             CCCCHHHHHhh-------c----HHH---HhcCCCCCEEEECcCchhhCHH
Confidence            5422 111111       1    122   23334789999996  445443

>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A

Probab=96.35  E-value=0.069  Score=48.07  Aligned_cols=157  Identities=11%  Similarity=0.115  Sum_probs=85.1

Q ss_pred             CCeEEEEcCCC--chHHHHHHHHHhCCCCcEEEEEecCCc--hhHHHHHhcCCCCCeEEEEe-CCCcH----------Hh
Q 018512           42 GFKVAILGAAG--GIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFL-GQPQL----------EN  106 (354)
Q Consensus        42 ~~kI~IiGa~G--~vG~~~a~~l~~~~~~~ei~L~D~~~~--~g~~~dl~~~~~~~~v~~~~-~~~d~----------~~  106 (354)
                      .+.+.|+||+|  -+|..+|..|+..|.  .|++.|+++.  +.....+.+.. ...+..+. +-++.          .+
T Consensus         6 gK~alVTGaa~~~GIG~aiA~~la~~Ga--~Vvi~~r~~~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~   82 (256)
T 4fs3_A            6 NKTYVIMGIANKRSIAFGVAKVLDQLGA--KLVFTYRKERSRKELEKLLEQLN-QPEAHLYQIDVQSDEEVINGFEQIGK   82 (256)
T ss_dssp             TCEEEEECCCSTTCHHHHHHHHHHHTTC--EEEEEESSGGGHHHHHHHHGGGT-CSSCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCCCchHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHhcC-CCcEEEEEccCCCHHHHHHHHHHHHH
Confidence            45788999866  699999999999998  8999999862  22233333322 11222211 11221          23


Q ss_pred             hhCCCcEEEEcCCCCCCC-------CCCHHHH---HHHHHHHHHHHHHHHhhhC-CCeEEEEecCCCCCchHHHHHHHHH
Q 018512          107 ALTGMDLVIIPAGVPRKP-------GMTRDDL---FNINAGIVRTLCEGIAKCC-PNATVNLISNPVNSTVPIAAEVFKK  175 (354)
Q Consensus       107 al~~aDvVIi~ag~~~~~-------g~~r~d~---~~~n~~~~~~i~~~i~~~~-p~a~viv~tNPv~~~~~~~~~~~~~  175 (354)
                      .+-..|++|..+|.....       ..+..++   +.-|+......+.....+. ..+.||++|.-....          
T Consensus        83 ~~G~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~IVnisS~~~~~----------  152 (256)
T 4fs3_A           83 DVGNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMPEGGSIVATTYLGGEF----------  152 (256)
T ss_dssp             HHCCCSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCTTCEEEEEEECGGGTS----------
T ss_pred             HhCCCCEEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCEEEEEecccccc----------
Confidence            456899999998864211       1233333   2345554445555555444 357777775322111          


Q ss_pred             hCCCCCCCEEEeccchHHHHHHHHHHHhCCCCCCCcceEE
Q 018512          176 AGTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVV  215 (354)
Q Consensus       176 ~~~~p~~kviG~t~ld~~r~~~~la~~l~v~~~~v~~~v~  215 (354)
                        +.|..-.++.+.-.-..|.+.+|..++  +..|++-.+
T Consensus       153 --~~~~~~~Y~asKaal~~ltr~lA~Ela--~~gIrVN~V  188 (256)
T 4fs3_A          153 --AVQNYNVMGVAKASLEANVKYLALDLG--PDNIRVNAI  188 (256)
T ss_dssp             --CCTTTHHHHHHHHHHHHHHHHHHHHHG--GGTEEEEEE
T ss_pred             --CcccchhhHHHHHHHHHHHHHHHHHhC--ccCeEEEEE
Confidence              222222233332233456777777764  455544444

>2i76_A Hypothetical protein; NADP, dehydrogenase, TM1727, structural genomics, PSI-2, protein structure initiative; HET: NDP; 3.00A {Thermotoga maritima} SCOP: a.100.1.10 c.2.1.6

Probab=96.35  E-value=0.00094  Score=61.33  Aligned_cols=62  Identities=10%  Similarity=0.126  Sum_probs=36.5

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEE-EEEecCCchhHHHHHhc-CCCCCeEEEEeCCCcHHhhhCCCcEEEEcC
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVL-HLYDVVNTPGVTADISH-MDTGAVVRGFLGQPQLENALTGMDLVIIPA  118 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei-~L~D~~~~~g~~~dl~~-~~~~~~v~~~~~~~d~~~al~~aDvVIi~a  118 (354)
                      |||+|||+ |.+|..++..|... +  +| .++|+++...  ..+.. ..  .   .   ..+++++++++|+||++.
T Consensus         3 m~I~iIG~-G~mG~~la~~l~~~-~--~v~~v~~~~~~~~--~~~~~~~g--~---~---~~~~~~~~~~~DvVilav   66 (276)
T 2i76_A            3 LVLNFVGT-GTLTRFFLECLKDR-Y--EIGYILSRSIDRA--RNLAEVYG--G---K---AATLEKHPELNGVVFVIV   66 (276)
T ss_dssp             -CCEEESC-CHHHHHHHHTTC-------CCCEECSSHHHH--HHHHHHTC--C---C---CCSSCCCCC---CEEECS
T ss_pred             ceEEEEeC-CHHHHHHHHHHHHc-C--cEEEEEeCCHHHH--HHHHHHcC--C---c---cCCHHHHHhcCCEEEEeC
Confidence            68999999 99999999988766 4  77 5899875211  11211 11  1   1   234456788999999984

>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*

Probab=96.30  E-value=0.012  Score=56.57  Aligned_cols=118  Identities=17%  Similarity=0.198  Sum_probs=75.1

Q ss_pred             CCCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecC----Cchh------HHHHHhcCCCCCeEEEEeCCCcHHhhh
Q 018512           39 GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVV----NTPG------VTADISHMDTGAVVRGFLGQPQLENAL  108 (354)
Q Consensus        39 ~~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~----~~~g------~~~dl~~~~~~~~v~~~~~~~d~~~al  108 (354)
                      +-+..||+|+|| |.+|..++..|+..|. .+|+++|++    ..+.      ....+.+.. ..    .....++++++
T Consensus       189 ~l~~~kVVv~GA-GaAG~~iAkll~~~G~-~~I~v~Dr~Gli~~~R~~~~L~~~k~~~A~~~-~~----~~~~~~L~eav  261 (388)
T 1vl6_A          189 KIEEVKVVVNGI-GAAGYNIVKFLLDLGV-KNVVAVDRKGILNENDPETCLNEYHLEIARIT-NP----ERLSGDLETAL  261 (388)
T ss_dssp             CTTTCEEEEECC-SHHHHHHHHHHHHHTC-CEEEEEETTEECCTTSGGGCSSHHHHHHHHTS-CT----TCCCSCHHHHH
T ss_pred             CCCCcEEEEECC-CHHHHHHHHHHHhCCC-CeEEEEECCCcccCCCcccccCHHHHHHHHhh-hc----cCchhhHHHHH
Confidence            445679999999 9999999999987774 589999997    2111      112222221 11    11235789999


Q ss_pred             CCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCCchHHHHHHHHHhCCCCCCCEEEec
Q 018512          109 TGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVT  188 (354)
Q Consensus       109 ~~aDvVIi~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~~~~~~~~~~p~~kviG~t  188 (354)
                      ++||++|=+.+ |   +.           +.+++.+.|.   ++.+|+=.+||.--.++   +-.++. |   ..++++.
T Consensus       262 ~~ADVlIG~Sa-p---~l-----------~t~emVk~Ma---~~pIIfalSNPt~E~~p---~~a~~~-g---~~i~atG  316 (388)
T 1vl6_A          262 EGADFFIGVSR-G---NI-----------LKPEWIKKMS---RKPVIFALANPVPEIDP---ELAREA-G---AFIVATG  316 (388)
T ss_dssp             TTCSEEEECSC-S---SC-----------SCHHHHTTSC---SSCEEEECCSSSCSSCH---HHHHHT-T---CSEEEES
T ss_pred             ccCCEEEEeCC-C---Cc-----------cCHHHHHhcC---CCCEEEEcCCCCCCCCH---HHHHHh-c---CeEEEeC
Confidence            99999988754 3   21           2234444443   57777777999866554   222343 2   4677775

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A

Probab=96.29  E-value=0.038  Score=49.69  Aligned_cols=149  Identities=11%  Similarity=0.118  Sum_probs=80.0

Q ss_pred             CCCeEEEEcCC--CchHHHHHHHHHhCCCCcEEEEEecCCc---hhHHHHHhcCCCCCeEEEEe-CCCc---HHhh----
Q 018512           41 AGFKVAILGAA--GGIGQPLAMLMKINPLVSVLHLYDVVNT---PGVTADISHMDTGAVVRGFL-GQPQ---LENA----  107 (354)
Q Consensus        41 ~~~kI~IiGa~--G~vG~~~a~~l~~~~~~~ei~L~D~~~~---~g~~~dl~~~~~~~~v~~~~-~~~d---~~~a----  107 (354)
                      +.+++.|+||+  |.+|..++..|+..|.  .|+++|.+..   .....++.... ...+..+. +-+|   .+++    
T Consensus        19 ~~k~vlITGas~~~giG~~~a~~l~~~G~--~v~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~Dl~~~~~v~~~~~~~   95 (267)
T 3gdg_A           19 KGKVVVVTGASGPKGMGIEAARGCAEMGA--AVAITYASRAQGAEENVKELEKTY-GIKAKAYKCQVDSYESCEKLVKDV   95 (267)
T ss_dssp             TTCEEEETTCCSSSSHHHHHHHHHHHTSC--EEEECBSSSSSHHHHHHHHHHHHH-CCCEECCBCCTTCHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCCChHHHHHHHHHHCCC--eEEEEeCCcchhHHHHHHHHHHhc-CCceeEEecCCCCHHHHHHHHHHH
Confidence            34589999998  7999999999999988  8999988762   22333343211 11122111 1112   2222    


Q ss_pred             ---hCCCcEEEEcCCCCCCCC---CCH---HHHHHHHHHHHH----HHHHHHhhhCCCeEEEEecCCCCCchHHHHHHHH
Q 018512          108 ---LTGMDLVIIPAGVPRKPG---MTR---DDLFNINAGIVR----TLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFK  174 (354)
Q Consensus       108 ---l~~aDvVIi~ag~~~~~g---~~r---~d~~~~n~~~~~----~i~~~i~~~~p~a~viv~tNPv~~~~~~~~~~~~  174 (354)
                         +...|++|+.||......   .+.   ...+..|+....    .+.+.+++.. .+.|++++......         
T Consensus        96 ~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~---------  165 (267)
T 3gdg_A           96 VADFGQIDAFIANAGATADSGILDGSVEAWNHVVQVDLNGTFHCAKAVGHHFKERG-TGSLVITASMSGHI---------  165 (267)
T ss_dssp             HHHTSCCSEEEECCCCCCCSCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCGGGTS---------
T ss_pred             HHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhcchHHHHHHHHHHHHHHHcC-CceEEEEccccccc---------
Confidence               346799999998754321   222   234555654444    4444445544 44555554322111         


Q ss_pred             HhCCCC-CCCEEEeccchHHHHHHHHHHHhC
Q 018512          175 KAGTYD-PKKLLGVTMLDVVRANTFVAEVLG  204 (354)
Q Consensus       175 ~~~~~p-~~kviG~t~ld~~r~~~~la~~l~  204 (354)
                        ..++ ..-.++.+......+.+.++..++
T Consensus       166 --~~~~~~~~~Y~~sK~a~~~~~~~la~e~~  194 (267)
T 3gdg_A          166 --ANFPQEQTSYNVAKAGCIHMARSLANEWR  194 (267)
T ss_dssp             --CCSSSCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             --cCCCCCCCcchHHHHHHHHHHHHHHHHhc
Confidence              1111 112233333334556777888775

>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B

Probab=96.29  E-value=0.007  Score=57.66  Aligned_cols=67  Identities=19%  Similarity=0.213  Sum_probs=48.7

Q ss_pred             CCCCeEEEEcCCCchHHHHHHHHH-hCCCCcEEEEEecCCc-hhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEc
Q 018512           40 AAGFKVAILGAAGGIGQPLAMLMK-INPLVSVLHLYDVVNT-PGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIP  117 (354)
Q Consensus        40 ~~~~kI~IiGa~G~vG~~~a~~l~-~~~~~~ei~L~D~~~~-~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~  117 (354)
                      -..++|+|||. |.+|+.++..+. ..|.  +|+.+|++.. .....++   .    +..   ..++++.+++||+|+++
T Consensus       161 l~g~~vgIIG~-G~IG~~vA~~l~~~~G~--~V~~~d~~~~~~~~~~~~---g----~~~---~~~l~ell~~aDvVil~  227 (348)
T 2w2k_A          161 PRGHVLGAVGL-GAIQKEIARKAVHGLGM--KLVYYDVAPADAETEKAL---G----AER---VDSLEELARRSDCVSVS  227 (348)
T ss_dssp             STTCEEEEECC-SHHHHHHHHHHHHTTCC--EEEEECSSCCCHHHHHHH---T----CEE---CSSHHHHHHHCSEEEEC
T ss_pred             CCCCEEEEEEE-CHHHHHHHHHHHHhcCC--EEEEECCCCcchhhHhhc---C----cEE---eCCHHHHhccCCEEEEe
Confidence            44579999999 999999999998 7777  8999999762 2112211   1    111   13567889999999998


Q ss_pred             CC
Q 018512          118 AG  119 (354)
Q Consensus       118 ag  119 (354)
                      ..
T Consensus       228 vp  229 (348)
T 2w2k_A          228 VP  229 (348)
T ss_dssp             CC
T ss_pred             CC
Confidence            53

>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A

Probab=96.27  E-value=0.012  Score=55.46  Aligned_cols=68  Identities=18%  Similarity=0.226  Sum_probs=48.8

Q ss_pred             CCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcCC
Q 018512           40 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG  119 (354)
Q Consensus        40 ~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~ag  119 (354)
                      -..++|+|||. |.+|+.++..+...|.  +|+.+|++.....  ......    +..   . ++++.+++||+|+++..
T Consensus       153 l~g~~vgIIG~-G~iG~~iA~~l~~~G~--~V~~~d~~~~~~~--~~~~~g----~~~---~-~l~e~l~~aDvVi~~vp  219 (330)
T 2gcg_A          153 LTQSTVGIIGL-GRIGQAIARRLKPFGV--QRFLYTGRQPRPE--EAAEFQ----AEF---V-STPELAAQSDFIVVACS  219 (330)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHGGGTC--CEEEEESSSCCHH--HHHTTT----CEE---C-CHHHHHHHCSEEEECCC
T ss_pred             CCCCEEEEECc-CHHHHHHHHHHHHCCC--EEEEECCCCcchh--HHHhcC----cee---C-CHHHHHhhCCEEEEeCC
Confidence            44679999999 9999999999987777  8999998752111  112211    121   2 56788999999999864


Q ss_pred             C
Q 018512          120 V  120 (354)
Q Consensus       120 ~  120 (354)
                      .
T Consensus       220 ~  220 (330)
T 2gcg_A          220 L  220 (330)
T ss_dssp             C
T ss_pred             C
Confidence            3

>2i99_A MU-crystallin homolog; thyroid hormine binding protein, oxidoreductase; HET: NDP; 2.60A {Homo sapiens}

Probab=96.26  E-value=0.0092  Score=55.83  Aligned_cols=70  Identities=16%  Similarity=0.231  Sum_probs=48.9

Q ss_pred             CCCCCeEEEEcCCCchHHHHHHHHHhC-CCCcEEEEEecCCch--hHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEE
Q 018512           39 GAAGFKVAILGAAGGIGQPLAMLMKIN-PLVSVLHLYDVVNTP--GVTADISHMDTGAVVRGFLGQPQLENALTGMDLVI  115 (354)
Q Consensus        39 ~~~~~kI~IiGa~G~vG~~~a~~l~~~-~~~~ei~L~D~~~~~--g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVI  115 (354)
                      +...++|+|||+ |.+|..++..|... + ..+|.++|+++..  ....++..     .+..   ..++++++++||+||
T Consensus       132 ~~~~~~igiIG~-G~~g~~~a~~l~~~~g-~~~V~v~dr~~~~~~~l~~~~~~-----~~~~---~~~~~e~v~~aDiVi  201 (312)
T 2i99_A          132 PPSSEVLCILGA-GVQAYSHYEIFTEQFS-FKEVRIWNRTKENAEKFADTVQG-----EVRV---CSSVQEAVAGADVII  201 (312)
T ss_dssp             CTTCCEEEEECC-SHHHHHHHHHHHHHCC-CSEEEEECSSHHHHHHHHHHSSS-----CCEE---CSSHHHHHTTCSEEE
T ss_pred             CCCCcEEEEECC-cHHHHHHHHHHHHhCC-CcEEEEEcCCHHHHHHHHHHhhC-----CeEE---eCCHHHHHhcCCEEE
Confidence            445679999999 99999999988765 4 3489999997522  12221111     1222   246788899999999


Q ss_pred             EcC
Q 018512          116 IPA  118 (354)
Q Consensus       116 i~a  118 (354)
                      ++.
T Consensus       202 ~at  204 (312)
T 2i99_A          202 TVT  204 (312)
T ss_dssp             ECC
T ss_pred             EEe
Confidence            974

>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}

Probab=96.23  E-value=0.0065  Score=56.85  Aligned_cols=67  Identities=24%  Similarity=0.297  Sum_probs=49.1

Q ss_pred             CCCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcC
Q 018512           39 GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA  118 (354)
Q Consensus        39 ~~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~a  118 (354)
                      .-..++|+|||. |.+|..++..+...|.  +|+.+|++.......   ...    +..    .++++.+++||+|+++.
T Consensus       139 ~l~g~~vgIiG~-G~IG~~~A~~l~~~G~--~V~~~d~~~~~~~~~---~~g----~~~----~~l~ell~~aDvV~l~~  204 (307)
T 1wwk_A          139 ELEGKTIGIIGF-GRIGYQVAKIANALGM--NILLYDPYPNEERAK---EVN----GKF----VDLETLLKESDVVTIHV  204 (307)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTC--EEEEECSSCCHHHHH---HTT----CEE----CCHHHHHHHCSEEEECC
T ss_pred             ccCCceEEEEcc-CHHHHHHHHHHHHCCC--EEEEECCCCChhhHh---hcC----ccc----cCHHHHHhhCCEEEEec
Confidence            345579999999 9999999999988776  899999976432221   111    111    14678899999999985


Q ss_pred             C
Q 018512          119 G  119 (354)
Q Consensus       119 g  119 (354)
                      .
T Consensus       205 p  205 (307)
T 1wwk_A          205 P  205 (307)
T ss_dssp             C
T ss_pred             C
Confidence            3

>1x7d_A Ornithine cyclodeaminase; binds NAD+, binds L-ornithine, binds L-proline, 2 bundle, beta barrel, rossmann fold, lyase; HET: NAD ORN MES; 1.60A {Pseudomonas putida} SCOP: c.2.1.13 PDB: 1u7h_A*

Probab=96.21  E-value=0.017  Score=54.99  Aligned_cols=76  Identities=18%  Similarity=0.323  Sum_probs=51.0

Q ss_pred             CCCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEE
Q 018512           39 GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVII  116 (354)
Q Consensus        39 ~~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi  116 (354)
                      +....+|+|||+ |.+|...+..+.......+|.++|++.  ++..+.++.... ...+..   ..++++++++||+||+
T Consensus       126 ~~~~~~v~iIGa-G~~a~~~a~al~~~~~~~~V~V~~r~~~~a~~la~~~~~~~-g~~~~~---~~~~~eav~~aDiVi~  200 (350)
T 1x7d_A          126 RPNARKMALIGN-GAQSEFQALAFHKHLGIEEIVAYDTDPLATAKLIANLKEYS-GLTIRR---ASSVAEAVKGVDIITT  200 (350)
T ss_dssp             CTTCCEEEEECC-STTHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHTTCT-TCEEEE---CSSHHHHHTTCSEEEE
T ss_pred             cccCCeEEEECC-cHHHHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHhcc-CceEEE---eCCHHHHHhcCCEEEE
Confidence            344569999999 999999887765433345999999986  233333443211 122332   3467889999999999


Q ss_pred             cCC
Q 018512          117 PAG  119 (354)
Q Consensus       117 ~ag  119 (354)
                      +..
T Consensus       201 aTp  203 (350)
T 1x7d_A          201 VTA  203 (350)
T ss_dssp             CCC
T ss_pred             ecc
Confidence            754

>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A

Probab=96.21  E-value=0.0045  Score=58.19  Aligned_cols=97  Identities=21%  Similarity=0.256  Sum_probs=62.1

Q ss_pred             CCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcCC
Q 018512           40 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG  119 (354)
Q Consensus        40 ~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~ag  119 (354)
                      -..++|.|||. |.+|+.+|..+..-|.  +|+.+|++...     ...      +.......++++.+++||+|+++..
T Consensus       137 l~g~tvGIiG~-G~IG~~vA~~l~~~G~--~V~~~dr~~~~-----~~~------~~~~~~~~~l~ell~~aDiV~l~~P  202 (315)
T 3pp8_A          137 REEFSVGIMGA-GVLGAKVAESLQAWGF--PLRCWSRSRKS-----WPG------VESYVGREELRAFLNQTRVLINLLP  202 (315)
T ss_dssp             STTCCEEEECC-SHHHHHHHHHHHTTTC--CEEEEESSCCC-----CTT------CEEEESHHHHHHHHHTCSEEEECCC
T ss_pred             cCCCEEEEEee-CHHHHHHHHHHHHCCC--EEEEEcCCchh-----hhh------hhhhcccCCHHHHHhhCCEEEEecC
Confidence            34579999999 9999999999987777  89999986521     000      1111122467889999999999743


Q ss_pred             CC-CCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec--CCCCC
Q 018512          120 VP-RKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS--NPVNS  164 (354)
Q Consensus       120 ~~-~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~t--NPv~~  164 (354)
                      .. ...+.-       |    .   +.+....|++++|+++  .++|.
T Consensus       203 lt~~t~~li-------~----~---~~l~~mk~gailIN~aRG~~vd~  236 (315)
T 3pp8_A          203 NTAQTVGII-------N----S---ELLDQLPDGAYVLNLARGVHVQE  236 (315)
T ss_dssp             CCGGGTTCB-------S----H---HHHTTSCTTEEEEECSCGGGBCH
T ss_pred             Cchhhhhhc-------c----H---HHHhhCCCCCEEEECCCChhhhH
Confidence            21 111110       1    1   2233345789999996  44443

>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}

Probab=96.19  E-value=0.011  Score=56.18  Aligned_cols=98  Identities=23%  Similarity=0.270  Sum_probs=63.0

Q ss_pred             CCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcCC
Q 018512           40 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG  119 (354)
Q Consensus        40 ~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~ag  119 (354)
                      -..++|.|||. |.+|+.+|..+..-|.  +|..+|+........   . .    ...   ..++++.+++||+|++...
T Consensus       171 l~gktvGIIGl-G~IG~~vA~~l~~~G~--~V~~~dr~~~~~~~~---~-g----~~~---~~~l~ell~~sDvV~l~~P  236 (345)
T 4g2n_A          171 LTGRRLGIFGM-GRIGRAIATRARGFGL--AIHYHNRTRLSHALE---E-G----AIY---HDTLDSLLGASDIFLIAAP  236 (345)
T ss_dssp             CTTCEEEEESC-SHHHHHHHHHHHTTTC--EEEEECSSCCCHHHH---T-T----CEE---CSSHHHHHHTCSEEEECSC
T ss_pred             cCCCEEEEEEe-ChhHHHHHHHHHHCCC--EEEEECCCCcchhhh---c-C----CeE---eCCHHHHHhhCCEEEEecC
Confidence            34579999999 9999999999987776  999999875221111   1 1    111   2367889999999999753


Q ss_pred             CC-CCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec--CCCCCc
Q 018512          120 VP-RKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS--NPVNST  165 (354)
Q Consensus       120 ~~-~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~t--NPv~~~  165 (354)
                      .. ...++-       |    .+.   +....|.+++|+++  ..+|.-
T Consensus       237 lt~~T~~li-------~----~~~---l~~mk~gailIN~aRG~~vde~  271 (345)
T 4g2n_A          237 GRPELKGFL-------D----HDR---IAKIPEGAVVINISRGDLINDD  271 (345)
T ss_dssp             CCGGGTTCB-------C----HHH---HHHSCTTEEEEECSCGGGBCHH
T ss_pred             CCHHHHHHh-------C----HHH---HhhCCCCcEEEECCCCchhCHH
Confidence            22 111110       1    122   23335789999996  445543

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ...

Probab=96.19  E-value=0.0048  Score=58.01  Aligned_cols=114  Identities=13%  Similarity=0.115  Sum_probs=62.8

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chh---HHHHHhc-CCCCCeEEEEe-CCCc---HHhhhC---
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPG---VTADISH-MDTGAVVRGFL-GQPQ---LENALT---  109 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g---~~~dl~~-~~~~~~v~~~~-~~~d---~~~al~---  109 (354)
                      ++|.|+||+|.+|..++..|+..|.  ++++++++.  ...   ....+.. ......+..+. +-+|   +.++++   
T Consensus         3 k~vlVTGas~GIG~ala~~L~~~G~--~v~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~   80 (327)
T 1jtv_A            3 TVVLITGCSSGIGLHLAVRLASDPS--QSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVT   80 (327)
T ss_dssp             EEEEESCCSSHHHHHHHHHHHTCTT--CCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCT
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCC--ceEEEEeecCcHHHHHHHHHHhhhccCCCCceEEEEecCCCHHHHHHHHHHHh
Confidence            4789999999999999999999986  566666543  211   1111210 00012232221 1122   334444   


Q ss_pred             --CCcEEEEcCCCCCCC---CCC---HHHHHHHHHHHHHHHHHH----HhhhCCCeEEEEec
Q 018512          110 --GMDLVIIPAGVPRKP---GMT---RDDLFNINAGIVRTLCEG----IAKCCPNATVNLIS  159 (354)
Q Consensus       110 --~aDvVIi~ag~~~~~---g~~---r~d~~~~n~~~~~~i~~~----i~~~~p~a~viv~t  159 (354)
                        ..|++|+.||.....   ..+   ....+.-|+.....+.+.    +++.. .+.||++|
T Consensus        81 ~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~-~g~IV~is  141 (327)
T 1jtv_A           81 EGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRG-SGRVLVTG  141 (327)
T ss_dssp             TSCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEEE
T ss_pred             cCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEEC
Confidence              489999999865321   112   223455666555555554    55443 45666665

>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}

Probab=96.16  E-value=0.0048  Score=59.92  Aligned_cols=117  Identities=20%  Similarity=0.250  Sum_probs=68.8

Q ss_pred             hhhhhhhcccCCCCCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc-hhHHHHHhcCCCCCe---------EE
Q 018512           27 SCLRQAKCRAKGGAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT-PGVTADISHMDTGAV---------VR   96 (354)
Q Consensus        27 ~~~~~~~~~~~~~~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~-~g~~~dl~~~~~~~~---------v~   96 (354)
                      ++|++.-|.. ++.++.||+|+|+ |.+|...+..+..-|.  +|..+|++.. ...+.++.-......         ..
T Consensus       176 ~~~~~l~t~~-g~v~~~kV~ViG~-G~iG~~aa~~a~~lGa--~V~v~D~~~~~l~~~~~~G~~~~~~~~~~~~d~~~~~  251 (405)
T 4dio_A          176 RALPMMMTAA-GTVPAAKIFVMGA-GVAGLQAIATARRLGA--VVSATDVRPAAKEQVASLGAKFIAVEDEEFKAAETAG  251 (405)
T ss_dssp             SCSSCEEETT-EEECCCEEEEECC-SHHHHHHHHHHHHTTC--EEEEECSSTTHHHHHHHTTCEECCCCC----------
T ss_pred             hhhchhhccC-CCcCCCEEEEECC-cHHHHHHHHHHHHCCC--EEEEEcCCHHHHHHHHHcCCceeeccccccccccccc
Confidence            3444443332 4556779999999 9999999999988787  8999999873 223333211000000         00


Q ss_pred             EEeC----------CCcHHhhhCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 018512           97 GFLG----------QPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  159 (354)
Q Consensus        97 ~~~~----------~~d~~~al~~aDvVIi~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~t  159 (354)
                      .+..          ..++.+++++||+||.++..|.+....   +      +.++.++.   ..|.++|+.++
T Consensus       252 ~ya~e~s~~~~~~~~~~l~e~l~~aDVVI~tvlipg~~ap~---L------vt~emv~~---Mk~GsVIVDvA  312 (405)
T 4dio_A          252 GYAKEMSGEYQVKQAALVAEHIAKQDIVITTALIPGRPAPR---L------VTREMLDS---MKPGSVVVDLA  312 (405)
T ss_dssp             -------CHHHHHHHHHHHHHHHTCSEEEECCCCSSSCCCC---C------BCHHHHTT---SCTTCEEEETT
T ss_pred             chhhhcchhhhhhhHhHHHHHhcCCCEEEECCcCCCCCCCE---E------ecHHHHhc---CCCCCEEEEEe
Confidence            0110          124678899999999987766432211   0      11233333   34888888776

>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*

Probab=96.15  E-value=0.014  Score=52.71  Aligned_cols=34  Identities=26%  Similarity=0.372  Sum_probs=30.3

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   78 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~   78 (354)
                      .||+|+|+ |.+|+.++..|+..|.. +|.++|.+.
T Consensus        32 ~~VlVvG~-Gg~G~~va~~La~~Gv~-~i~lvD~d~   65 (249)
T 1jw9_B           32 SRVLIVGL-GGLGCAASQYLASAGVG-NLTLLDFDT   65 (249)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCS-EEEEECCCB
T ss_pred             CeEEEEee-CHHHHHHHHHHHHcCCC-eEEEEcCCC
Confidence            38999999 99999999999988863 899999885

>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}

Probab=96.12  E-value=0.078  Score=47.78  Aligned_cols=150  Identities=15%  Similarity=0.157  Sum_probs=83.2

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEe-CCCc------HHhhhCCCcEE
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFL-GQPQ------LENALTGMDLV  114 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~-~~~d------~~~al~~aDvV  114 (354)
                      .+.+.|+||++-+|..++..|+..|.  .|++.|++...     +.... ...+..+. +-+|      .-+.+...|++
T Consensus        11 GK~alVTGas~GIG~aia~~la~~Ga--~Vv~~~~~~~~-----~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~g~iDiL   82 (242)
T 4b79_A           11 GQQVLVTGGSSGIGAAIAMQFAELGA--EVVALGLDADG-----VHAPR-HPRIRREELDITDSQRLQRLFEALPRLDVL   82 (242)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESSTTS-----TTSCC-CTTEEEEECCTTCHHHHHHHHHHCSCCSEE
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCC--EEEEEeCCHHH-----Hhhhh-cCCeEEEEecCCCHHHHHHHHHhcCCCCEE
Confidence            34789999999999999999999998  89999998621     11111 11122211 1112      23456789999


Q ss_pred             EEcCCCCCCCC-CC---HHHHHHHHHH----HHHHHHHHHhhhCCCeEEEEecCCCCCchHHHHHHHHHhCCCCCCCEEE
Q 018512          115 IIPAGVPRKPG-MT---RDDLFNINAG----IVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLG  186 (354)
Q Consensus       115 Ii~ag~~~~~g-~~---r~d~~~~n~~----~~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~~~~~~~~~~p~~kviG  186 (354)
                      |..||...... .+   ....+.-|+.    ..+...+.|++.  .+.||+++.-....            +.|..=.++
T Consensus        83 VNNAGi~~~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~--~G~IVnisS~~~~~------------~~~~~~~Y~  148 (242)
T 4b79_A           83 VNNAGISRDREEYDLATFERVLRLNLSAAMLASQLARPLLAQR--GGSILNIASMYSTF------------GSADRPAYS  148 (242)
T ss_dssp             EECCCCCCGGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--CEEEEEECCGGGTS------------CCSSCHHHH
T ss_pred             EECCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc--CCeEEEEeeccccC------------CCCCCHHHH
Confidence            99999753221 22   2223344543    344455555443  47778776322111            222221222


Q ss_pred             eccchHHHHHHHHHHHhCCCCCCCcceEE
Q 018512          187 VTMLDVVRANTFVAEVLGLDPRDVDVPVV  215 (354)
Q Consensus       187 ~t~ld~~r~~~~la~~l~v~~~~v~~~v~  215 (354)
                      .+.-.-..|.+.+|..++  +..|++-.+
T Consensus       149 asKaav~~ltr~lA~Ela--~~gIrVNaV  175 (242)
T 4b79_A          149 ASKGAIVQLTRSLACEYA--AERIRVNAI  175 (242)
T ss_dssp             HHHHHHHHHHHHHHHHHG--GGTEEEEEE
T ss_pred             HHHHHHHHHHHHHHHHhh--hcCeEEEEE
Confidence            232233456777887774  455544333

>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}

Probab=96.10  E-value=0.025  Score=53.12  Aligned_cols=128  Identities=16%  Similarity=0.151  Sum_probs=71.7

Q ss_pred             CCeEEEEcCCCchHHH-HHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhh--CCCcEEEEcC
Q 018512           42 GFKVAILGAAGGIGQP-LAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENAL--TGMDLVIIPA  118 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~-~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al--~~aDvVIi~a  118 (354)
                      ++||.|||. |..|.+ +|..|...|.  +|.++|..........|....  ..+.  .+. +. +.+  .++|+||.+.
T Consensus         4 ~~~i~~iGi-Gg~Gms~~A~~L~~~G~--~V~~~D~~~~~~~~~~L~~~g--i~v~--~g~-~~-~~l~~~~~d~vV~Sp   74 (326)
T 3eag_A            4 MKHIHIIGI-GGTFMGGLAAIAKEAGF--EVSGCDAKMYPPMSTQLEALG--IDVY--EGF-DA-AQLDEFKADVYVIGN   74 (326)
T ss_dssp             CCEEEEESC-CSHHHHHHHHHHHHTTC--EEEEEESSCCTTHHHHHHHTT--CEEE--ESC-CG-GGGGSCCCSEEEECT
T ss_pred             CcEEEEEEE-CHHHHHHHHHHHHhCCC--EEEEEcCCCCcHHHHHHHhCC--CEEE--CCC-CH-HHcCCCCCCEEEECC
Confidence            569999999 999996 8889999998  999999875222223344432  2232  232 32 345  4899999998


Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHHHHhh-hCCCeEEEEecCCCC--CchHHHHHHHHHhCCCCC
Q 018512          119 GVPRKPGMTRDDLFNINAGIVRTLCEGIAK-CCPNATVNLISNPVN--STVPIAAEVFKKAGTYDP  181 (354)
Q Consensus       119 g~~~~~g~~r~d~~~~n~~~~~~i~~~i~~-~~p~a~viv~tNPv~--~~~~~~~~~~~~~~~~p~  181 (354)
                      |.+...- ......+++++++.++ +.+.+ ...+..+|-+|-..+  ..+.++++++.. .|.++
T Consensus        75 gi~~~~p-~~~~a~~~gi~v~~~~-e~~~~~~~~~~~~IaVTGTnGKTTTt~ll~~iL~~-~g~~~  137 (326)
T 3eag_A           75 VAKRGMD-VVEAILNLGLPYISGP-QWLSENVLHHHWVLGVAGTHGKTTTASMLAWVLEY-AGLAP  137 (326)
T ss_dssp             TCCTTCH-HHHHHHHTTCCEEEHH-HHHHHHTGGGSEEEEEESSSCHHHHHHHHHHHHHH-TTCCC
T ss_pred             CcCCCCH-HHHHHHHcCCcEEeHH-HHHHHHHhcCCCEEEEECCCCHHHHHHHHHHHHHH-cCCCc
Confidence            8774321 1111223344444332 22222 123345566654444  444555555544 35443

>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}

Probab=96.10  E-value=0.02  Score=52.89  Aligned_cols=97  Identities=20%  Similarity=0.177  Sum_probs=63.5

Q ss_pred             CCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcCC
Q 018512           40 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG  119 (354)
Q Consensus        40 ~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~ag  119 (354)
                      -+.++|.|+|+ |.+|..++..+...|.  +|..+|++....  ..+....  ...  . ...++++.++++|+|+.+..
T Consensus       153 l~g~~v~IiG~-G~iG~~~a~~l~~~G~--~V~~~dr~~~~~--~~~~~~g--~~~--~-~~~~l~~~l~~aDvVi~~~p  222 (293)
T 3d4o_A          153 IHGANVAVLGL-GRVGMSVARKFAALGA--KVKVGARESDLL--ARIAEMG--MEP--F-HISKAAQELRDVDVCINTIP  222 (293)
T ss_dssp             STTCEEEEECC-SHHHHHHHHHHHHTTC--EEEEEESSHHHH--HHHHHTT--SEE--E-EGGGHHHHTTTCSEEEECCS
T ss_pred             CCCCEEEEEee-CHHHHHHHHHHHhCCC--EEEEEECCHHHH--HHHHHCC--Cee--c-ChhhHHHHhcCCCEEEECCC
Confidence            45579999999 9999999999988886  899999875221  1122221  111  1 12356788999999999863


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec-CCCCC
Q 018512          120 VPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS-NPVNS  164 (354)
Q Consensus       120 ~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~t-NPv~~  164 (354)
                      .    ++-       |-    +   .+....|.+++++++ +|.++
T Consensus       223 ~----~~i-------~~----~---~l~~mk~~~~lin~ar~~~~~  250 (293)
T 3d4o_A          223 A----LVV-------TA----N---VLAEMPSHTFVIDLASKPGGT  250 (293)
T ss_dssp             S----CCB-------CH----H---HHHHSCTTCEEEECSSTTCSB
T ss_pred             h----HHh-------CH----H---HHHhcCCCCEEEEecCCCCCC
Confidence            2    211       00    1   122334788999987 77765

>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}

Probab=96.06  E-value=0.0038  Score=60.68  Aligned_cols=76  Identities=22%  Similarity=0.177  Sum_probs=49.6

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCC-cEEEEEecCC--chhHHHHHhcCCCCCeEEEE-eC---CCcHHhhhCC--Cc
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLV-SVLHLYDVVN--TPGVTADISHMDTGAVVRGF-LG---QPQLENALTG--MD  112 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~-~ei~L~D~~~--~~g~~~dl~~~~~~~~v~~~-~~---~~d~~~al~~--aD  112 (354)
                      ++||+|+|| |.+|+.++..|+..+.. .+|++.|++.  ....+.++.... ...+... .+   ..++++++++  +|
T Consensus         1 M~kVlIiGa-GgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~-~~~~~~~~~D~~d~~~l~~~l~~~~~D   78 (405)
T 4ina_A            1 MAKVLQIGA-GGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKG-YGEIDITTVDADSIEELVALINEVKPQ   78 (405)
T ss_dssp             -CEEEEECC-SHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHTT-CCCCEEEECCTTCHHHHHHHHHHHCCS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhhc-CCceEEEEecCCCHHHHHHHHHhhCCC
Confidence            369999999 99999999999987743 5899999986  233333443211 0112111 11   1345566776  89


Q ss_pred             EEEEcCC
Q 018512          113 LVIIPAG  119 (354)
Q Consensus       113 vVIi~ag  119 (354)
                      +||++++
T Consensus        79 vVin~ag   85 (405)
T 4ina_A           79 IVLNIAL   85 (405)
T ss_dssp             EEEECSC
T ss_pred             EEEECCC
Confidence            9999976

>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}

Probab=96.06  E-value=0.0093  Score=57.44  Aligned_cols=119  Identities=23%  Similarity=0.240  Sum_probs=69.7

Q ss_pred             hhhhhhcccCCCCCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc-hhHHHHHhcCCCCCe-----EEEEe--
Q 018512           28 CLRQAKCRAKGGAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT-PGVTADISHMDTGAV-----VRGFL--   99 (354)
Q Consensus        28 ~~~~~~~~~~~~~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~-~g~~~dl~~~~~~~~-----v~~~~--   99 (354)
                      +|++.-+.. ++.++.||+|||+ |.+|...+..+...|.  +|..+|++.. ...+.++.-......     ...+.  
T Consensus       171 ~~~~l~~~~-~~v~~~kV~ViG~-G~iG~~aa~~a~~lGa--~V~v~D~~~~~l~~~~~lGa~~~~l~~~~~~~~gya~~  246 (381)
T 3p2y_A          171 FVPMLTTAA-GTVKPASALVLGV-GVAGLQALATAKRLGA--KTTGYDVRPEVAEQVRSVGAQWLDLGIDAAGEGGYARE  246 (381)
T ss_dssp             CSSCEECSS-CEECCCEEEEESC-SHHHHHHHHHHHHHTC--EEEEECSSGGGHHHHHHTTCEECCCC------------
T ss_pred             hhhhhhccc-CCcCCCEEEEECc-hHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHcCCeEEeccccccccccchhh
Confidence            344333333 5667789999999 9999999998887776  8999999862 223333210000000     00000  


Q ss_pred             --------CCCcHHhhhCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCC
Q 018512          100 --------GQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPV  162 (354)
Q Consensus       100 --------~~~d~~~al~~aDvVIi~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv  162 (354)
                              ...++++++++||+||.++..|......   +      +.++.++.|   .|.++|+.++-+-
T Consensus       247 ~~~~~~~~~~~~l~e~l~~aDIVI~tv~iPg~~ap~---L------vt~emv~~M---kpGsVIVDvA~d~  305 (381)
T 3p2y_A          247 LSEAERAQQQQALEDAITKFDIVITTALVPGRPAPR---L------VTAAAATGM---QPGSVVVDLAGET  305 (381)
T ss_dssp             -CHHHHHHHHHHHHHHHTTCSEEEECCCCTTSCCCC---C------BCHHHHHTS---CTTCEEEETTGGG
T ss_pred             hhHHHHhhhHHHHHHHHhcCCEEEECCCCCCcccce---e------ecHHHHhcC---CCCcEEEEEeCCC
Confidence                    0124678899999999987666422110   0      112334443   4788888886443

>1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A*

Probab=96.03  E-value=0.018  Score=54.74  Aligned_cols=67  Identities=25%  Similarity=0.393  Sum_probs=48.7

Q ss_pred             CCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcCC
Q 018512           40 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG  119 (354)
Q Consensus        40 ~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~ag  119 (354)
                      -..++|.|||. |.+|+.++..+...|.  +|+.+|++.......++   .    +..   ..++++.++.||+|+++..
T Consensus       166 l~g~tvGIIG~-G~IG~~vA~~l~~~G~--~V~~~d~~~~~~~~~~~---g----~~~---~~~l~ell~~aDvV~l~~P  232 (347)
T 1mx3_A          166 IRGETLGIIGL-GRVGQAVALRAKAFGF--NVLFYDPYLSDGVERAL---G----LQR---VSTLQDLLFHSDCVTLHCG  232 (347)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHTTTC--EEEEECTTSCTTHHHHH---T----CEE---CSSHHHHHHHCSEEEECCC
T ss_pred             CCCCEEEEEeE-CHHHHHHHHHHHHCCC--EEEEECCCcchhhHhhc---C----Cee---cCCHHHHHhcCCEEEEcCC
Confidence            45679999999 9999999999987776  89999987532222211   1    111   1256788999999999753

>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}

Probab=96.03  E-value=0.011  Score=56.00  Aligned_cols=95  Identities=24%  Similarity=0.311  Sum_probs=60.9

Q ss_pred             CCCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcC
Q 018512           39 GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA  118 (354)
Q Consensus        39 ~~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~a  118 (354)
                      .-..++|.|||. |.+|..+|..+..-|.  +|+.+|++.......   ....    ..    .++++.+++||+|+++.
T Consensus       162 ~l~g~tvgIIGl-G~IG~~vA~~l~~~G~--~V~~~d~~~~~~~~~---~~g~----~~----~~l~ell~~aDvV~l~~  227 (335)
T 2g76_A          162 ELNGKTLGILGL-GRIGREVATRMQSFGM--KTIGYDPIISPEVSA---SFGV----QQ----LPLEEIWPLCDFITVHT  227 (335)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHTTTC--EEEEECSSSCHHHHH---HTTC----EE----CCHHHHGGGCSEEEECC
T ss_pred             CCCcCEEEEEeE-CHHHHHHHHHHHHCCC--EEEEECCCcchhhhh---hcCc----ee----CCHHHHHhcCCEEEEec
Confidence            345579999999 9999999999987676  899999876332211   1111    11    25678899999999985


Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecC
Q 018512          119 GVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISN  160 (354)
Q Consensus       119 g~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tN  160 (354)
                      .....   ++ .++  |    .   +.+....|.+++|+++-
T Consensus       228 P~t~~---t~-~li--~----~---~~l~~mk~gailIN~ar  256 (335)
T 2g76_A          228 PLLPS---TT-GLL--N----D---NTFAQCKKGVRVVNCAR  256 (335)
T ss_dssp             CCCTT---TT-TSB--C----H---HHHTTSCTTEEEEECSC
T ss_pred             CCCHH---HH-Hhh--C----H---HHHhhCCCCcEEEECCC
Confidence            33211   11 000  1    1   22333457899999863

>3hdj_A Probable ornithine cyclodeaminase; APC62486, bordetella pertussis TOH structural genomics, PSI-2, protein structure initiative; 1.70A {Bordetella pertussis}

Probab=96.01  E-value=0.012  Score=55.31  Aligned_cols=75  Identities=16%  Similarity=0.205  Sum_probs=52.4

Q ss_pred             CCCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcC
Q 018512           39 GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA  118 (354)
Q Consensus        39 ~~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~a  118 (354)
                      +....+|+|||+ |.+|...+..|.....+.+|.++|++.++..+.++.... ...+..   . ++++++++||+||.+.
T Consensus       118 ~~~~~~v~iIGa-G~~a~~~~~al~~~~~~~~V~v~~r~~a~~la~~l~~~~-g~~~~~---~-~~~eav~~aDIVi~aT  191 (313)
T 3hdj_A          118 RPRSSVLGLFGA-GTQGAEHAAQLSARFALEAILVHDPYASPEILERIGRRC-GVPARM---A-APADIAAQADIVVTAT  191 (313)
T ss_dssp             CTTCCEEEEECC-SHHHHHHHHHHHHHSCCCEEEEECTTCCHHHHHHHHHHH-TSCEEE---C-CHHHHHHHCSEEEECC
T ss_pred             cCCCcEEEEECc-cHHHHHHHHHHHHhCCCcEEEEECCcHHHHHHHHHHHhc-CCeEEE---e-CHHHHHhhCCEEEEcc
Confidence            344569999999 999999988887643366999999984444444444211 122332   2 6789999999999975


Q ss_pred             C
Q 018512          119 G  119 (354)
Q Consensus       119 g  119 (354)
                      .
T Consensus       192 ~  192 (313)
T 3hdj_A          192 R  192 (313)
T ss_dssp             C
T ss_pred             C
Confidence            4

>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*

Probab=96.00  E-value=0.12  Score=46.81  Aligned_cols=155  Identities=15%  Similarity=0.102  Sum_probs=85.9

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCch-hHHHHHhcCCCCCeEEEEeCCCc---H-------HhhhCC
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP-GVTADISHMDTGAVVRGFLGQPQ---L-------ENALTG  110 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~-g~~~dl~~~~~~~~v~~~~~~~d---~-------~~al~~  110 (354)
                      .+.+.|+||++-+|..++..|+..|.  .|++.|++... .....+............ +-+|   .       .+.+-.
T Consensus         7 gKvalVTGas~GIG~aia~~la~~Ga--~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~-Dv~~~~~v~~~v~~~~~~~G~   83 (258)
T 4gkb_A            7 DKVVIVTGGASGIGGAISMRLAEERA--IPVVFARHAPDGAFLDALAQRQPRATYLPV-ELQDDAQCRDAVAQTIATFGR   83 (258)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESSCCCHHHHHHHHHHCTTCEEEEC-CTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHcCC--EEEEEECCcccHHHHHHHHhcCCCEEEEEe-ecCCHHHHHHHHHHHHHHhCC
Confidence            45788999999999999999999998  89999998732 222222222111111111 1111   1       234568


Q ss_pred             CcEEEEcCCCCCCCC--CCHHH---HHHHHH----HHHHHHHHHHhhhCCCeEEEEecCCCCCchHHHHHHHHHhCCCCC
Q 018512          111 MDLVIIPAGVPRKPG--MTRDD---LFNINA----GIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDP  181 (354)
Q Consensus       111 aDvVIi~ag~~~~~g--~~r~d---~~~~n~----~~~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~~~~~~~~~~p~  181 (354)
                      -|++|..||......  .+..+   .+..|+    ...+..++.|++.  .+.||+++.-..          ..  +.|.
T Consensus        84 iDiLVNnAGi~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~--~G~IVnisS~~~----------~~--~~~~  149 (258)
T 4gkb_A           84 LDGLVNNAGVNDGIGLDAGRDAFVASLERNLIHYYAMAHYCVPHLKAT--RGAIVNISSKTA----------VT--GQGN  149 (258)
T ss_dssp             CCEEEECCCCCCCCCTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEEEECCTHH----------HH--CCSS
T ss_pred             CCEEEECCCCCCCCCccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc--CCeEEEEeehhh----------cc--CCCC
Confidence            999999999754322  23322   334454    3455566666543  366777753111          11  3333


Q ss_pred             CCEEEeccchHHHHHHHHHHHhCCCCCCCcceEE
Q 018512          182 KKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVV  215 (354)
Q Consensus       182 ~kviG~t~ld~~r~~~~la~~l~v~~~~v~~~v~  215 (354)
                      .-.++.+.-.-..|.+.+|..++  +..|++-.+
T Consensus       150 ~~~Y~asKaav~~ltr~lA~ela--~~gIrVN~V  181 (258)
T 4gkb_A          150 TSGYCASKGAQLALTREWAVALR--EHGVRVNAV  181 (258)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHG--GGTCEEEEE
T ss_pred             chHHHHHHHHHHHHHHHHHHHhc--ccCeEEEEE
Confidence            22333333334457778888775  455544333

>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}

Probab=95.99  E-value=0.035  Score=54.45  Aligned_cols=92  Identities=17%  Similarity=0.132  Sum_probs=60.7

Q ss_pred             CCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcCC
Q 018512           40 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG  119 (354)
Q Consensus        40 ~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~ag  119 (354)
                      ....+|+|+|. |.+|..+|..+..-|.  +|+.+|+++...... ..+ ..    ..    .+++++++.||+|+.+.+
T Consensus       245 L~GKTVgVIG~-G~IGr~vA~~lrafGa--~Viv~d~dp~~a~~A-~~~-G~----~v----v~LeElL~~ADIVv~atg  311 (464)
T 3n58_A          245 MAGKVAVVCGY-GDVGKGSAQSLAGAGA--RVKVTEVDPICALQA-AMD-GF----EV----VTLDDAASTADIVVTTTG  311 (464)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTC--EEEEECSSHHHHHHH-HHT-TC----EE----CCHHHHGGGCSEEEECCS
T ss_pred             ccCCEEEEECc-CHHHHHHHHHHHHCCC--EEEEEeCCcchhhHH-Hhc-Cc----ee----ccHHHHHhhCCEEEECCC
Confidence            45569999999 9999999999987776  899999876221111 111 11    11    246789999999998754


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCC
Q 018512          120 VPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNP  161 (354)
Q Consensus       120 ~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNP  161 (354)
                      ..   +.-           -.+...   ...+.++++|++..
T Consensus       312 t~---~lI-----------~~e~l~---~MK~GAILINvGRg  336 (464)
T 3n58_A          312 NK---DVI-----------TIDHMR---KMKDMCIVGNIGHF  336 (464)
T ss_dssp             SS---SSB-----------CHHHHH---HSCTTEEEEECSSS
T ss_pred             Cc---ccc-----------CHHHHh---cCCCCeEEEEcCCC
Confidence            32   110           112222   33478999998754

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster}

Probab=95.97  E-value=0.049  Score=55.68  Aligned_cols=113  Identities=14%  Similarity=0.161  Sum_probs=60.7

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEec---------CC--chhHHHHHhcCCCCCeEEE-EeCCCcHHhhh-
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDV---------VN--TPGVTADISHMDTGAVVRG-FLGQPQLENAL-  108 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~---------~~--~~g~~~dl~~~~~~~~v~~-~~~~~d~~~al-  108 (354)
                      .+.+.|+||+|.+|.+++..|+..|.  .|++.|+         +.  ......++.....  .... .....+.++.+ 
T Consensus        19 gk~~lVTGas~GIG~aiA~~La~~Ga--~Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~D~~d~~~~~~~~~   94 (613)
T 3oml_A           19 GRVAVVTGAGAGLGREYALLFAERGA--KVVVNDLGGTHSGDGASQRAADIVVDEIRKAGG--EAVADYNSVIDGAKVIE   94 (613)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHHTTC--EEEEC--------------CHHHHHHHHHHTTC--CEEECCCCGGGHHHHHC
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEeCCcccccccCCHHHHHHHHHHHHHhCC--eEEEEeCCHHHHHHHHH
Confidence            45788999999999999999999997  8999987         22  2223334433221  1111 11112222333 


Q ss_pred             ------CCCcEEEEcCCCCCCC---CCCH---HHHHHHHHHHHHHHH----HHHhhhCCCeEEEEec
Q 018512          109 ------TGMDLVIIPAGVPRKP---GMTR---DDLFNINAGIVRTLC----EGIAKCCPNATVNLIS  159 (354)
Q Consensus       109 ------~~aDvVIi~ag~~~~~---g~~r---~d~~~~n~~~~~~i~----~~i~~~~p~a~viv~t  159 (354)
                            ...|++|+.||.....   ..+.   ...+.-|+.....+.    +.|++. ..+.||++|
T Consensus        95 ~~~~~~g~iDiLVnnAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~l~~~~~p~m~~~-~~g~IV~is  160 (613)
T 3oml_A           95 TAIKAFGRVDILVNNAGILRDRSLVKTSEQDWNLVNDVHLKGSFKCTQAAFPYMKKQ-NYGRIIMTS  160 (613)
T ss_dssp             ----------CEECCCCCCCCCCSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-TCEEEEEEC
T ss_pred             HHHHHCCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEEC
Confidence                  3689999999975432   2232   234455655544444    444543 346666664

>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*

Probab=95.95  E-value=0.014  Score=55.09  Aligned_cols=68  Identities=25%  Similarity=0.408  Sum_probs=50.1

Q ss_pred             CCCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcC
Q 018512           39 GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA  118 (354)
Q Consensus        39 ~~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~a  118 (354)
                      .-..++|+|||. |.+|..++..+...|.  +|+.+|++.......++   .    +. .   .++++.+++||+|+++.
T Consensus       147 ~l~g~~vgIIG~-G~iG~~iA~~l~~~G~--~V~~~d~~~~~~~~~~~---g----~~-~---~~l~~~l~~aDvVil~v  212 (334)
T 2dbq_A          147 DVYGKTIGIIGL-GRIGQAIAKRAKGFNM--RILYYSRTRKEEVEREL---N----AE-F---KPLEDLLRESDFVVLAV  212 (334)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTC--EEEEECSSCCHHHHHHH---C----CE-E---CCHHHHHHHCSEEEECC
T ss_pred             CCCCCEEEEEcc-CHHHHHHHHHHHhCCC--EEEEECCCcchhhHhhc---C----cc-c---CCHHHHHhhCCEEEECC
Confidence            345679999999 9999999999988887  89999997643222211   1    11 1   25678899999999986


Q ss_pred             CC
Q 018512          119 GV  120 (354)
Q Consensus       119 g~  120 (354)
                      ..
T Consensus       213 p~  214 (334)
T 2dbq_A          213 PL  214 (334)
T ss_dssp             CC
T ss_pred             CC
Confidence            43

>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}

Probab=95.94  E-value=0.014  Score=56.29  Aligned_cols=123  Identities=17%  Similarity=0.253  Sum_probs=74.3

Q ss_pred             CCCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC-c-hhHHHHHhcCCC-C-CeEEEEeCCCcHHhhhCCCcEE
Q 018512           39 GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN-T-PGVTADISHMDT-G-AVVRGFLGQPQLENALTGMDLV  114 (354)
Q Consensus        39 ~~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~-~-~g~~~dl~~~~~-~-~~v~~~~~~~d~~~al~~aDvV  114 (354)
                      +-+..||+|+|| |.+|.+++..++..|. .+|+++|++. . .+...+|.+... + ..........++++++++||++
T Consensus       185 ~l~d~kVVi~GA-GaAG~~iA~ll~~~Ga-~~I~v~D~~Gli~~~R~~~L~~~k~~fa~~~~~~~~~~~L~eav~~ADV~  262 (398)
T 2a9f_A          185 SLDEVSIVVNGG-GSAGLSITRKLLAAGA-TKVTVVDKFGIINEQEAAQLAPHHLDIAKVTNREFKSGTLEDALEGADIF  262 (398)
T ss_dssp             CTTSCEEEEECC-SHHHHHHHHHHHHHTC-CEEEEEETTEECCTTCCCSCCC---CHHHHHSCTTCCCSCSHHHHTTCSE
T ss_pred             CCCccEEEEECC-CHHHHHHHHHHHHcCC-CeEEEEECCCcccCCccccchHHHHHHhhccCcccchhhHHHHhccCCEE
Confidence            445679999999 9999999998887775 5999999974 1 111001222110 0 0000001134678999999998


Q ss_pred             EEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCCchHHHHHHHHHhCCCCCCCEEEec
Q 018512          115 IIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVT  188 (354)
Q Consensus       115 Ii~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~~~~~~~~~~p~~kviG~t  188 (354)
                      |=+.+ |   |.           +.+++.+.|.   ++++|+=.|||.--.++   +-.++. |   ..++++.
T Consensus       263 IG~Sa-p---gl-----------~T~EmVk~Ma---~~pIIfalsNPt~E~~p---e~a~~~-g---~~i~atG  311 (398)
T 2a9f_A          263 IGVSA-P---GV-----------LKAEWISKMA---ARPVIFAMANPIPEIYP---DEALEA-G---AYIVGTG  311 (398)
T ss_dssp             EECCS-T---TC-----------CCHHHHHTSC---SSCEEEECCSSSCSSCH---HHHHTT-T---CSEEEES
T ss_pred             EecCC-C---CC-----------CCHHHHHhhC---CCCEEEECCCCCccCCH---HHHHHh-C---CeEEEeC
Confidence            76643 3   32           2234444443   89999999999866654   222332 2   3577774

>2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structur genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus}

Probab=95.89  E-value=0.0068  Score=56.85  Aligned_cols=62  Identities=21%  Similarity=0.219  Sum_probs=47.5

Q ss_pred             CCCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcC
Q 018512           39 GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA  118 (354)
Q Consensus        39 ~~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~a  118 (354)
                      ....++|+|||. |.+|..++..+...|.  +|+.+|++.....            +.    ..++++.++.||+|+++.
T Consensus       141 ~l~g~~vgIIG~-G~IG~~~A~~l~~~G~--~V~~~d~~~~~~~------------~~----~~~l~ell~~aDvV~l~~  201 (311)
T 2cuk_A          141 DLQGLTLGLVGM-GRIGQAVAKRALAFGM--RVVYHARTPKPLP------------YP----FLSLEELLKEADVVSLHT  201 (311)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTC--EEEEECSSCCSSS------------SC----BCCHHHHHHHCSEEEECC
T ss_pred             CCCCCEEEEEEE-CHHHHHHHHHHHHCCC--EEEEECCCCcccc------------cc----cCCHHHHHhhCCEEEEeC
Confidence            345679999999 9999999999988776  8999998752110            00    135678899999999975


Q ss_pred             C
Q 018512          119 G  119 (354)
Q Consensus       119 g  119 (354)
                      .
T Consensus       202 p  202 (311)
T 2cuk_A          202 P  202 (311)
T ss_dssp             C
T ss_pred             C
Confidence            3

>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A

Probab=95.82  E-value=0.021  Score=52.24  Aligned_cols=70  Identities=11%  Similarity=0.203  Sum_probs=50.4

Q ss_pred             CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcCCC
Q 018512           41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGV  120 (354)
Q Consensus        41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~ag~  120 (354)
                      +.+||+|||+ |.+|.+++..|...+.  +|.++|++..+  +.++....   .+..   ..++.++++++|+||.+...
T Consensus       128 ~~~~v~iiGa-G~~g~aia~~L~~~g~--~V~v~~r~~~~--~~~l~~~~---g~~~---~~~~~~~~~~aDiVi~atp~  196 (275)
T 2hk9_A          128 KEKSILVLGA-GGASRAVIYALVKEGA--KVFLWNRTKEK--AIKLAQKF---PLEV---VNSPEEVIDKVQVIVNTTSV  196 (275)
T ss_dssp             GGSEEEEECC-SHHHHHHHHHHHHHTC--EEEEECSSHHH--HHHHTTTS---CEEE---CSCGGGTGGGCSEEEECSST
T ss_pred             CCCEEEEECc-hHHHHHHHHHHHHcCC--EEEEEECCHHH--HHHHHHHc---CCee---ehhHHhhhcCCCEEEEeCCC
Confidence            4579999999 9999999999988886  89999987522  23333221   1332   12567788999999998654


Q ss_pred             C
Q 018512          121 P  121 (354)
Q Consensus       121 ~  121 (354)
                      .
T Consensus       197 ~  197 (275)
T 2hk9_A          197 G  197 (275)
T ss_dssp             T
T ss_pred             C
Confidence            4

>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}

Probab=95.82  E-value=0.0046  Score=61.17  Aligned_cols=72  Identities=21%  Similarity=0.268  Sum_probs=46.7

Q ss_pred             CCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCc---HH-hhhCCCcEEE
Q 018512           40 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQ---LE-NALTGMDLVI  115 (354)
Q Consensus        40 ~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d---~~-~al~~aDvVI  115 (354)
                      +..|||.|+|+ |.+|+++|..|...++  +|+++|.++..  ..++.+......+.+  ..++   ++ .-+++||++|
T Consensus         1 ~~~M~iiI~G~-G~vG~~la~~L~~~~~--~v~vId~d~~~--~~~~~~~~~~~~i~G--d~~~~~~L~~Agi~~ad~~i   73 (461)
T 4g65_A            1 SNAMKIIILGA-GQVGGTLAENLVGENN--DITIVDKDGDR--LRELQDKYDLRVVNG--HASHPDVLHEAGAQDADMLV   73 (461)
T ss_dssp             -CCEEEEEECC-SHHHHHHHHHTCSTTE--EEEEEESCHHH--HHHHHHHSSCEEEES--CTTCHHHHHHHTTTTCSEEE
T ss_pred             CCcCEEEEECC-CHHHHHHHHHHHHCCC--CEEEEECCHHH--HHHHHHhcCcEEEEE--cCCCHHHHHhcCCCcCCEEE
Confidence            35799999999 9999999999988888  99999998621  122221111111221  1122   23 3369999988


Q ss_pred             EcC
Q 018512          116 IPA  118 (354)
Q Consensus       116 i~a  118 (354)
                      .+.
T Consensus        74 a~t   76 (461)
T 4g65_A           74 AVT   76 (461)
T ss_dssp             ECC
T ss_pred             EEc
Confidence            753

>2nqt_A N-acetyl-gamma-glutamyl-phosphate reductase; apoprotein, dimer, rossmann fold, structural genomics, PSI, protein structure initiative; 1.58A {Mycobacterium tuberculosis} PDB: 2i3a_A* 2i3g_A

Probab=95.81  E-value=0.013  Score=55.98  Aligned_cols=99  Identities=18%  Similarity=0.125  Sum_probs=57.3

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCC----CcEEEEEecCCchhHHHHHhcCCCC--CeEEEEeCCCcHHhhhCCCcEEE
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPL----VSVLHLYDVVNTPGVTADISHMDTG--AVVRGFLGQPQLENALTGMDLVI  115 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~----~~ei~L~D~~~~~g~~~dl~~~~~~--~~v~~~~~~~d~~~al~~aDvVI  115 (354)
                      ++||+|+||+|.+|..+...|...+.    ..+|+++-.....+...+-.+....  ..+....  .+ .++++++|+||
T Consensus         9 m~kVaIvGATG~vG~~llr~L~~~~~~~~~~~ei~~l~s~~~agk~~~~~~~~l~~~~~~~~~~--~~-~~~~~~~DvVf   85 (352)
T 2nqt_A            9 ATKVAVAGASGYAGGEILRLLLGHPAYADGRLRIGALTAATSAGSTLGEHHPHLTPLAHRVVEP--TE-AAVLGGHDAVF   85 (352)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHTCHHHHTTSEEEEEEEESSCTTSBGGGTCTTCGGGTTCBCEE--CC-HHHHTTCSEEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHcCCCCCCccEEEEEEECCCcCCCchhhhcccccccceeeecc--CC-HHHhcCCCEEE
Confidence            46999999999999999999987761    2367776432211111111111100  1111111  13 35688999999


Q ss_pred             EcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCC
Q 018512          116 IPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPV  162 (354)
Q Consensus       116 i~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv  162 (354)
                      .+.|...                .+++++.+ +.  .+++|-.|.|-
T Consensus        86 ~alg~~~----------------s~~~~~~~-~~--G~~vIDlSa~~  113 (352)
T 2nqt_A           86 LALPHGH----------------SAVLAQQL-SP--ETLIIDCGADF  113 (352)
T ss_dssp             ECCTTSC----------------CHHHHHHS-CT--TSEEEECSSTT
T ss_pred             ECCCCcc----------------hHHHHHHH-hC--CCEEEEECCCc
Confidence            9865331                23556666 43  35677778775

>1omo_A Alanine dehydrogenase; two-domain, beta-sandwich-dimer, rossmann-fold NAD domain, human MU crystallin homolog; HET: NAD; 2.32A {Archaeoglobus fulgidus} SCOP: c.2.1.13 PDB: 1vll_A

Probab=95.81  E-value=0.024  Score=53.24  Aligned_cols=73  Identities=11%  Similarity=0.064  Sum_probs=50.1

Q ss_pred             CCCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEE
Q 018512           39 GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVII  116 (354)
Q Consensus        39 ~~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi  116 (354)
                      +....+|+|||+ |.+|...+..|.......+|.++|++.  ++..+.++....  ..+. .   .++++++ ++|+||+
T Consensus       122 ~~~~~~v~iIGa-G~~a~~~~~al~~~~~~~~V~v~~r~~~~a~~la~~~~~~~--~~~~-~---~~~~e~v-~aDvVi~  193 (322)
T 1omo_A          122 RKNSSVFGFIGC-GTQAYFQLEALRRVFDIGEVKAYDVREKAAKKFVSYCEDRG--ISAS-V---QPAEEAS-RCDVLVT  193 (322)
T ss_dssp             CTTCCEEEEECC-SHHHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHHHTT--CCEE-E---CCHHHHT-SSSEEEE
T ss_pred             CCCCCEEEEEcC-cHHHHHHHHHHHHhCCccEEEEECCCHHHHHHHHHHHHhcC--ceEE-E---CCHHHHh-CCCEEEE
Confidence            345569999999 999999988887633356999999986  233333343211  1222 2   3677889 9999999


Q ss_pred             cCC
Q 018512          117 PAG  119 (354)
Q Consensus       117 ~ag  119 (354)
                      +..
T Consensus       194 aTp  196 (322)
T 1omo_A          194 TTP  196 (322)
T ss_dssp             CCC
T ss_pred             eeC
Confidence            743

>3fr7_A Putative ketol-acid reductoisomerase (OS05G057370 protein); rossmann fold, NADPH, knotted protein, branched-chain amino biosynthesis; 1.55A {Oryza sativa japonica group} PDB: 3fr8_A* 1qmg_A* 1yve_I*

Probab=95.79  E-value=0.037  Score=54.86  Aligned_cols=67  Identities=13%  Similarity=0.201  Sum_probs=43.9

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhC------CCCcEEEEEecCC--chhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEE
Q 018512           43 FKVAILGAAGGIGQPLAMLMKIN------PLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLV  114 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~------~~~~ei~L~D~~~--~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvV  114 (354)
                      +||+|||. |.+|.+++..|...      |+  +|++.+...  ....+.+..-......      ..+..+++++||+|
T Consensus        55 KkIgIIGl-GsMG~AmA~nLr~s~~~~g~G~--~ViVg~r~~sks~e~A~e~G~~v~d~t------a~s~aEAa~~ADVV  125 (525)
T 3fr7_A           55 KQIGVIGW-GSQGPAQAQNLRDSLAEAKSDI--VVKIGLRKGSKSFDEARAAGFTEESGT------LGDIWETVSGSDLV  125 (525)
T ss_dssp             SEEEEECC-TTHHHHHHHHHHHHHHHTTCCC--EEEEEECTTCSCHHHHHHTTCCTTTTC------EEEHHHHHHHCSEE
T ss_pred             CEEEEEeE-hHHHHHHHHHHHhcccccCCCC--EEEEEeCCchhhHHHHHHCCCEEecCC------CCCHHHHHhcCCEE
Confidence            69999998 99999999999887      76  666555543  2222222211100000      02457899999999


Q ss_pred             EEcC
Q 018512          115 IIPA  118 (354)
Q Consensus       115 Ii~a  118 (354)
                      |++.
T Consensus       126 ILaV  129 (525)
T 3fr7_A          126 LLLI  129 (525)
T ss_dssp             EECS
T ss_pred             EECC
Confidence            9984

>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}

Probab=95.73  E-value=0.02  Score=54.07  Aligned_cols=67  Identities=25%  Similarity=0.342  Sum_probs=49.2

Q ss_pred             CCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcCC
Q 018512           40 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG  119 (354)
Q Consensus        40 ~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~ag  119 (354)
                      -..++|+|||. |.+|+.+|..+...|.  +|+.+|++.......++   .    +..    .++++.+++||+|+++..
T Consensus       144 l~g~~vgIIG~-G~iG~~vA~~l~~~G~--~V~~~d~~~~~~~~~~~---g----~~~----~~l~e~l~~aDiVil~vp  209 (333)
T 2d0i_A          144 LYGKKVGILGM-GAIGKAIARRLIPFGV--KLYYWSRHRKVNVEKEL---K----ARY----MDIDELLEKSDIVILALP  209 (333)
T ss_dssp             STTCEEEEECC-SHHHHHHHHHHGGGTC--EEEEECSSCCHHHHHHH---T----EEE----CCHHHHHHHCSEEEECCC
T ss_pred             CCcCEEEEEcc-CHHHHHHHHHHHHCCC--EEEEECCCcchhhhhhc---C----cee----cCHHHHHhhCCEEEEcCC
Confidence            34579999999 9999999999987776  89999997643222211   1    221    256788999999999854


Q ss_pred             C
Q 018512          120 V  120 (354)
Q Consensus       120 ~  120 (354)
                      .
T Consensus       210 ~  210 (333)
T 2d0i_A          210 L  210 (333)
T ss_dssp             C
T ss_pred             C
Confidence            3

>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*

Probab=95.71  E-value=0.066  Score=53.37  Aligned_cols=114  Identities=24%  Similarity=0.212  Sum_probs=72.4

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC-----chhHHHHHhcCCCCCeEEEEeC-CCc---HHhhhC----
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN-----TPGVTADISHMDTGAVVRGFLG-QPQ---LENALT----  109 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~-----~~g~~~dl~~~~~~~~v~~~~~-~~d---~~~al~----  109 (354)
                      .++.|+||+|.+|..++..|+..|.. .|++.+++.     ......++....  ..+..+.. -+|   +.+.++    
T Consensus       240 ~~vLITGgsgGIG~alA~~La~~Ga~-~vvl~~R~~~~~~~~~~l~~~l~~~g--~~v~~~~~Dvtd~~~v~~~~~~i~~  316 (496)
T 3mje_A          240 GSVLVTGGTGGIGGRVARRLAEQGAA-HLVLTSRRGADAPGAAELRAELEQLG--VRVTIAACDAADREALAALLAELPE  316 (496)
T ss_dssp             SEEEEETCSSHHHHHHHHHHHHTTCS-EEEEEESSGGGSTTHHHHHHHHHHTT--CEEEEEECCTTCHHHHHHHHHTCCT
T ss_pred             CEEEEECCCCchHHHHHHHHHHCCCc-EEEEEeCCCCChHHHHHHHHHHHhcC--CeEEEEEccCCCHHHHHHHHHHHHH
Confidence            68999999999999999999988752 688888763     122334454432  23333211 123   223332    


Q ss_pred             --CCcEEEEcCCCCCCC----CCCH---HHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 018512          110 --GMDLVIIPAGVPRKP----GMTR---DDLFNINAGIVRTLCEGIAKCCPNATVNLIS  159 (354)
Q Consensus       110 --~aDvVIi~ag~~~~~----g~~r---~d~~~~n~~~~~~i~~~i~~~~p~a~viv~t  159 (354)
                        ..|+||++||.....    ..+.   ...+.-|+.....+.+.+.+...+.+|++.|
T Consensus       317 ~g~ld~vVh~AGv~~~~~~l~~~t~e~~~~vl~~nv~g~~~L~~~~~~~~~~~iV~~SS  375 (496)
T 3mje_A          317 DAPLTAVFHSAGVAHDDAPVADLTLGQLDALMRAKLTAARHLHELTADLDLDAFVLFSS  375 (496)
T ss_dssp             TSCEEEEEECCCCCCSCCCTTTCCHHHHHHHHHTTHHHHHHHHHHHTTSCCSEEEEEEE
T ss_pred             hCCCeEEEECCcccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHhhccCCCEEEEEeC
Confidence              479999999976222    2232   3456778888888988888765555444443

>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1

Probab=95.71  E-value=0.034  Score=51.11  Aligned_cols=37  Identities=14%  Similarity=0.125  Sum_probs=32.0

Q ss_pred             CCCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC
Q 018512           39 GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   78 (354)
Q Consensus        39 ~~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~   78 (354)
                      +-+.++|+|+|+ |.+|...+..|+..|.  +|+++|.+.
T Consensus        10 ~l~~k~VLVVGg-G~va~rka~~Ll~~Ga--~VtViap~~   46 (274)
T 1kyq_A           10 QLKDKRILLIGG-GEVGLTRLYKLMPTGC--KLTLVSPDL   46 (274)
T ss_dssp             CCTTCEEEEEEE-SHHHHHHHHHHGGGTC--EEEEEEEEE
T ss_pred             EcCCCEEEEECC-cHHHHHHHHHHHhCCC--EEEEEcCCC
Confidence            345579999999 9999999999999997  899999754

>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}

Probab=95.65  E-value=0.051  Score=54.51  Aligned_cols=115  Identities=13%  Similarity=0.061  Sum_probs=70.6

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEE-ecCC---------------chhHHHHHhcCCCCCeEEEEeC-CCc-
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLY-DVVN---------------TPGVTADISHMDTGAVVRGFLG-QPQ-  103 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~-D~~~---------------~~g~~~dl~~~~~~~~v~~~~~-~~d-  103 (354)
                      ...+.|+||+|.+|..++..|+..|.. .|+|. +++.               ......++....  ..+..+.. -+| 
T Consensus       251 ~~~vLITGgsgGIG~~lA~~La~~G~~-~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~g--~~v~~~~~Dvtd~  327 (525)
T 3qp9_A          251 DGTVLVTGAEEPAAAEAARRLARDGAG-HLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADLG--ATATVVTCDLTDA  327 (525)
T ss_dssp             TSEEEESSTTSHHHHHHHHHHHHHTCC-EEEEEECCCC---------------CHHHHHHHHHHT--CEEEEEECCTTSH
T ss_pred             CCEEEEECCCCcHHHHHHHHHHHcCCC-EEEEEeCCCCCCccccccccccCHHHHHHHHHHHhcC--CEEEEEECCCCCH
Confidence            457899999999999999999988762 47887 7763               122333443322  23333211 123 


Q ss_pred             --HHhhhC------CCcEEEEcCCCCCCC---CCCH---HHHHHHHHHHHHHHHHHHhhhCC----CeEEEEec
Q 018512          104 --LENALT------GMDLVIIPAGVPRKP---GMTR---DDLFNINAGIVRTLCEGIAKCCP----NATVNLIS  159 (354)
Q Consensus       104 --~~~al~------~aDvVIi~ag~~~~~---g~~r---~d~~~~n~~~~~~i~~~i~~~~p----~a~viv~t  159 (354)
                        +.+.++      ..|.||++||.....   ..+.   ...+.-|+.....+.+.+.....    .+.|+++|
T Consensus       328 ~~v~~~~~~i~~~g~id~vVh~AGv~~~~~~~~~~~~~~~~v~~~nv~g~~~L~~~~~~~~~~~~~~~~iV~~S  401 (525)
T 3qp9_A          328 EAAARLLAGVSDAHPLSAVLHLPPTVDSEPLAATDADALARVVTAKATAALHLDRLLREAAAAGGRPPVLVLFS  401 (525)
T ss_dssp             HHHHHHHHTSCTTSCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHTC----CCCEEEEEE
T ss_pred             HHHHHHHHHHHhcCCCcEEEECCcCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHhccccccCCCCCEEEEEC
Confidence              233333      469999999975432   2232   33466788888888888776651    34555554

>1qp8_A Formate dehydrogenase; oxidoreductase; HET: NDP; 2.80A {Pyrobaculum aerophilum} SCOP: c.2.1.4 c.23.12.1

Probab=95.65  E-value=0.012  Score=54.86  Aligned_cols=62  Identities=23%  Similarity=0.225  Sum_probs=47.2

Q ss_pred             CCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcCC
Q 018512           40 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG  119 (354)
Q Consensus        40 ~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~ag  119 (354)
                      -..++|.|||. |.+|+.+|..+...|.  +|+.+|++...       . ..    .   ...++++.++.||+|+++..
T Consensus       122 l~g~~vgIIG~-G~IG~~~A~~l~~~G~--~V~~~dr~~~~-------~-~~----~---~~~~l~ell~~aDvV~l~~P  183 (303)
T 1qp8_A          122 IQGEKVAVLGL-GEIGTRVGKILAALGA--QVRGFSRTPKE-------G-PW----R---FTNSLEEALREARAAVCALP  183 (303)
T ss_dssp             CTTCEEEEESC-STHHHHHHHHHHHTTC--EEEEECSSCCC-------S-SS----C---CBSCSHHHHTTCSEEEECCC
T ss_pred             CCCCEEEEEcc-CHHHHHHHHHHHHCCC--EEEEECCCccc-------c-Cc----c---cCCCHHHHHhhCCEEEEeCc
Confidence            45679999999 9999999999988787  89999986531       0 11    0   11356788999999999853

>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A*

Probab=95.64  E-value=0.014  Score=58.77  Aligned_cols=66  Identities=23%  Similarity=0.318  Sum_probs=48.8

Q ss_pred             CCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcCC
Q 018512           40 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG  119 (354)
Q Consensus        40 ~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~ag  119 (354)
                      -..++|+|||. |.+|+.+|..|...|.  +|+.+|++.....+.++.       +..   . ++++.+++||+|+++..
T Consensus       140 l~g~~vgIIG~-G~IG~~vA~~l~~~G~--~V~~~d~~~~~~~a~~~g-------~~~---~-~l~e~~~~aDvV~l~~P  205 (529)
T 1ygy_A          140 IFGKTVGVVGL-GRIGQLVAQRIAAFGA--YVVAYDPYVSPARAAQLG-------IEL---L-SLDDLLARADFISVHLP  205 (529)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHTTTC--EEEEECTTSCHHHHHHHT-------CEE---C-CHHHHHHHCSEEEECCC
T ss_pred             cCCCEEEEEee-CHHHHHHHHHHHhCCC--EEEEECCCCChhHHHhcC-------cEE---c-CHHHHHhcCCEEEECCC
Confidence            34579999999 9999999999988777  899999876322222221       111   1 46788999999999853

>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}

Probab=95.63  E-value=0.02  Score=54.80  Aligned_cols=99  Identities=20%  Similarity=0.309  Sum_probs=62.5

Q ss_pred             CCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcCC
Q 018512           40 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG  119 (354)
Q Consensus        40 ~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~ag  119 (354)
                      -..++|.|||. |.+|+.+|..+..-|.  +|..+|.........   ....    ..    .++++.++.||+|++...
T Consensus       174 l~gktvGIIGl-G~IG~~vA~~l~~fG~--~V~~~d~~~~~~~~~---~~g~----~~----~~l~ell~~aDvV~l~~P  239 (365)
T 4hy3_A          174 IAGSEIGIVGF-GDLGKALRRVLSGFRA--RIRVFDPWLPRSMLE---ENGV----EP----ASLEDVLTKSDFIFVVAA  239 (365)
T ss_dssp             SSSSEEEEECC-SHHHHHHHHHHTTSCC--EEEEECSSSCHHHHH---HTTC----EE----CCHHHHHHSCSEEEECSC
T ss_pred             cCCCEEEEecC-CcccHHHHHhhhhCCC--EEEEECCCCCHHHHh---hcCe----ee----CCHHHHHhcCCEEEEcCc
Confidence            34579999999 9999999998876666  999999875322211   1111    11    257889999999999743


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec--CCCCCc
Q 018512          120 VPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS--NPVNST  165 (354)
Q Consensus       120 ~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~t--NPv~~~  165 (354)
                      ...   .++ .++  |       .+.+....|.+++|+++  .++|.-
T Consensus       240 lt~---~T~-~li--~-------~~~l~~mk~gailIN~aRG~~vde~  274 (365)
T 4hy3_A          240 VTS---ENK-RFL--G-------AEAFSSMRRGAAFILLSRADVVDFD  274 (365)
T ss_dssp             SSC---C----CC--C-------HHHHHTSCTTCEEEECSCGGGSCHH
T ss_pred             CCH---HHH-hhc--C-------HHHHhcCCCCcEEEECcCCchhCHH
Confidence            221   111 000  1       12233445889999996  555544

>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}

Probab=95.58  E-value=0.021  Score=54.55  Aligned_cols=76  Identities=24%  Similarity=0.269  Sum_probs=51.2

Q ss_pred             CCCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCch-hHHHHHhcCCCCCeEEE-EeCCCcHHhhhCCCcEEEE
Q 018512           39 GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP-GVTADISHMDTGAVVRG-FLGQPQLENALTGMDLVII  116 (354)
Q Consensus        39 ~~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~-g~~~dl~~~~~~~~v~~-~~~~~d~~~al~~aDvVIi  116 (354)
                      +-++++|+|+|+ |.+|..++..+...|.  +|+++|+++.. ..+.+.  ...  .+.. .....++.+.++++|+||.
T Consensus       163 ~l~~~~V~ViGa-G~iG~~~a~~l~~~Ga--~V~~~d~~~~~~~~~~~~--~g~--~~~~~~~~~~~l~~~~~~~DvVi~  235 (369)
T 2eez_A          163 GVAPASVVILGG-GTVGTNAAKIALGMGA--QVTILDVNHKRLQYLDDV--FGG--RVITLTATEANIKKSVQHADLLIG  235 (369)
T ss_dssp             BBCCCEEEEECC-SHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHH--TTT--SEEEEECCHHHHHHHHHHCSEEEE
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhCCC--EEEEEECCHHHHHHHHHh--cCc--eEEEecCCHHHHHHHHhCCCEEEE
Confidence            345679999999 9999999999998887  89999997522 111111  111  1211 1122356678899999999


Q ss_pred             cCCCC
Q 018512          117 PAGVP  121 (354)
Q Consensus       117 ~ag~~  121 (354)
                      +++.+
T Consensus       236 ~~g~~  240 (369)
T 2eez_A          236 AVLVP  240 (369)
T ss_dssp             CCC--
T ss_pred             CCCCC
Confidence            98765

>1j4a_A D-LDH, D-lactate dehydrogenase; NAD-dependent dehydrogenase, reversible interconversion of pyruvate INTO D-lactate; 1.90A {Lactobacillus delbrueckii subsp} SCOP: c.2.1.4 c.23.12.1 PDB: 1j49_A* 2dld_A*

Probab=95.56  E-value=0.025  Score=53.41  Aligned_cols=64  Identities=19%  Similarity=0.306  Sum_probs=47.7

Q ss_pred             CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcCC
Q 018512           41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG  119 (354)
Q Consensus        41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~ag  119 (354)
                      ..++|.|||. |.+|..+|..+...|.  +|+.+|++.... ..++   ..      .  ..++++.+++||+|+++..
T Consensus       145 ~g~~vgIiG~-G~IG~~~A~~l~~~G~--~V~~~d~~~~~~-~~~~---~~------~--~~~l~ell~~aDvV~l~~p  208 (333)
T 1j4a_A          145 RDQVVGVVGT-GHIGQVFMQIMEGFGA--KVITYDIFRNPE-LEKK---GY------Y--VDSLDDLYKQADVISLHVP  208 (333)
T ss_dssp             GGSEEEEECC-SHHHHHHHHHHHHTTC--EEEEECSSCCHH-HHHT---TC------B--CSCHHHHHHHCSEEEECSC
T ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHCCC--EEEEECCCcchh-HHhh---Ce------e--cCCHHHHHhhCCEEEEcCC
Confidence            4569999999 9999999999987776  899999876332 1211   11      1  1256788999999999853

>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}

Probab=95.54  E-value=0.029  Score=51.95  Aligned_cols=74  Identities=18%  Similarity=0.157  Sum_probs=45.5

Q ss_pred             CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCC--CCeEEEEeCCCcHHhhhCCCcEEEEc
Q 018512           41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDT--GAVVRGFLGQPQLENALTGMDLVIIP  117 (354)
Q Consensus        41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~--~~~v~~~~~~~d~~~al~~aDvVIi~  117 (354)
                      .++||+|+||+|.+|+.++..+...+-..=+..+|.+.....-.|+.....  ...+..   +.|+++.+.++|+||-.
T Consensus        20 ~~irV~V~Ga~GrMGr~i~~~v~~~~~~eLvg~vd~~~~~~~G~d~gel~G~~~~gv~v---~~dl~~ll~~aDVvIDF   95 (288)
T 3ijp_A           20 GSMRLTVVGANGRMGRELITAIQRRKDVELCAVLVRKGSSFVDKDASILIGSDFLGVRI---TDDPESAFSNTEGILDF   95 (288)
T ss_dssp             -CEEEEESSTTSHHHHHHHHHHHTCSSEEEEEEBCCTTCTTTTSBGGGGTTCSCCSCBC---BSCHHHHTTSCSEEEEC
T ss_pred             CCeEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCccccccchHHhhccCcCCcee---eCCHHHHhcCCCEEEEc
Confidence            456999999779999999998887653323456687541101112222111  112222   35788889999999865

>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A

Probab=95.51  E-value=0.011  Score=52.35  Aligned_cols=97  Identities=19%  Similarity=0.127  Sum_probs=58.0

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCc---HHhh-hCCCcEEEEc
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQ---LENA-LTGMDLVIIP  117 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d---~~~a-l~~aDvVIi~  117 (354)
                      .++|.|+|+ |.+|+.++..|...+.   ++++|.++...  ..+. .. ...+.+  +.++   ++++ +++||.||++
T Consensus         9 ~~~viI~G~-G~~G~~la~~L~~~g~---v~vid~~~~~~--~~~~-~~-~~~i~g--d~~~~~~l~~a~i~~ad~vi~~   78 (234)
T 2aef_A            9 SRHVVICGW-SESTLECLRELRGSEV---FVLAEDENVRK--KVLR-SG-ANFVHG--DPTRVSDLEKANVRGARAVIVD   78 (234)
T ss_dssp             -CEEEEESC-CHHHHHHHHHSTTSEE---EEEESCGGGHH--HHHH-TT-CEEEES--CTTCHHHHHHTTCTTCSEEEEC
T ss_pred             CCEEEEECC-ChHHHHHHHHHHhCCe---EEEEECCHHHH--HHHh-cC-CeEEEc--CCCCHHHHHhcCcchhcEEEEc
Confidence            358999999 9999999999977664   88999876321  2222 11 111211  1122   3334 7899999997


Q ss_pred             CCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeE-EEEecCCCC
Q 018512          118 AGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNAT-VNLISNPVN  163 (354)
Q Consensus       118 ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~-viv~tNPv~  163 (354)
                      .+.         |  ..|..    ++..+++.+|+.. +.-+.+|.+
T Consensus        79 ~~~---------d--~~n~~----~~~~a~~~~~~~~iia~~~~~~~  110 (234)
T 2aef_A           79 LES---------D--SETIH----CILGIRKIDESVRIIAEAERYEN  110 (234)
T ss_dssp             CSC---------H--HHHHH----HHHHHHHHCSSSEEEEECSSGGG
T ss_pred             CCC---------c--HHHHH----HHHHHHHHCCCCeEEEEECCHhH
Confidence            421         1  33433    3445566778744 444567654

>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A

Probab=95.50  E-value=0.052  Score=53.42  Aligned_cols=73  Identities=16%  Similarity=0.108  Sum_probs=47.8

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEE-eCCC---cHHhhhCCCcEEEEc
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGF-LGQP---QLENALTGMDLVIIP  117 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~-~~~~---d~~~al~~aDvVIi~  117 (354)
                      +++|.|+|+ |++|+.++..|+..+.  +|+++|++..  .+.++....  ..+... ....   ++.++++++|+||++
T Consensus         3 ~k~VlViGa-G~iG~~ia~~L~~~G~--~V~v~~R~~~--~a~~la~~~--~~~~~~~~Dv~d~~~l~~~l~~~DvVIn~   75 (450)
T 1ff9_A            3 TKSVLMLGS-GFVTRPTLDVLTDSGI--KVTVACRTLE--SAKKLSAGV--QHSTPISLDVNDDAALDAEVAKHDLVISL   75 (450)
T ss_dssp             CCEEEEECC-STTHHHHHHHHHTTTC--EEEEEESSHH--HHHHTTTTC--TTEEEEECCTTCHHHHHHHHTTSSEEEEC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCcC--EEEEEECCHH--HHHHHHHhc--CCceEEEeecCCHHHHHHHHcCCcEEEEC
Confidence            468999997 9999999999998775  8999998642  222232211  112111 1112   345778999999999


Q ss_pred             CCCC
Q 018512          118 AGVP  121 (354)
Q Consensus       118 ag~~  121 (354)
                      ++..
T Consensus        76 a~~~   79 (450)
T 1ff9_A           76 IPYT   79 (450)
T ss_dssp             CC--
T ss_pred             Cccc
Confidence            8643

>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A

Probab=95.50  E-value=0.035  Score=51.26  Aligned_cols=77  Identities=21%  Similarity=0.280  Sum_probs=52.2

Q ss_pred             CCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc--hhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEc
Q 018512           40 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIP  117 (354)
Q Consensus        40 ~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~--~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~  117 (354)
                      .+..++.|+|+ |.+|.+++..|...|. .+|+++|++..  +..+.++........+... ...+++++++++|+||.+
T Consensus       125 l~~k~vlVlGa-GG~g~aia~~L~~~G~-~~v~i~~R~~~~a~~la~~~~~~~~~~~i~~~-~~~~l~~~l~~~DiVIna  201 (283)
T 3jyo_A          125 AKLDSVVQVGA-GGVGNAVAYALVTHGV-QKLQVADLDTSRAQALADVINNAVGREAVVGV-DARGIEDVIAAADGVVNA  201 (283)
T ss_dssp             CCCSEEEEECC-SHHHHHHHHHHHHTTC-SEEEEECSSHHHHHHHHHHHHHHHTSCCEEEE-CSTTHHHHHHHSSEEEEC
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHCCC-CEEEEEECCHHHHHHHHHHHHhhcCCceEEEc-CHHHHHHHHhcCCEEEEC
Confidence            34569999999 9999999999998875 37999999762  2333344322111223332 124677888999999997


Q ss_pred             CC
Q 018512          118 AG  119 (354)
Q Consensus       118 ag  119 (354)
                      ..
T Consensus       202 Tp  203 (283)
T 3jyo_A          202 TP  203 (283)
T ss_dssp             SS
T ss_pred             CC
Confidence            43

>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}

Probab=95.49  E-value=0.026  Score=53.18  Aligned_cols=65  Identities=20%  Similarity=0.266  Sum_probs=47.6

Q ss_pred             CCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcC
Q 018512           40 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA  118 (354)
Q Consensus        40 ~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~a  118 (354)
                      -..++|.|||. |.+|+.+|..+..-|.  +|..+|++...     ....   .....   ..++++.+++||+|+++.
T Consensus       135 l~gktvGIiGl-G~IG~~vA~~l~~~G~--~V~~~dr~~~~-----~~~~---~~~~~---~~~l~ell~~aDvV~l~l  199 (324)
T 3evt_A          135 LTGQQLLIYGT-GQIGQSLAAKASALGM--HVIGVNTTGHP-----ADHF---HETVA---FTATADALATANFIVNAL  199 (324)
T ss_dssp             STTCEEEEECC-SHHHHHHHHHHHHTTC--EEEEEESSCCC-----CTTC---SEEEE---GGGCHHHHHHCSEEEECC
T ss_pred             ccCCeEEEECc-CHHHHHHHHHHHhCCC--EEEEECCCcch-----hHhH---hhccc---cCCHHHHHhhCCEEEEcC
Confidence            34579999999 9999999999988787  99999987521     0111   11111   235678899999999974

>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A

Probab=95.49  E-value=0.022  Score=55.09  Aligned_cols=68  Identities=18%  Similarity=0.215  Sum_probs=48.8

Q ss_pred             CCCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC-chhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEc
Q 018512           39 GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN-TPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIP  117 (354)
Q Consensus        39 ~~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~-~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~  117 (354)
                      .-..++|.|||. |.+|+.+|..+..-|.  +|+.+|++. ......++.       +..   ..++++.++.||+|++.
T Consensus       188 ~l~gktvGIIGl-G~IG~~vA~~l~a~G~--~V~~~d~~~~~~~~~~~~G-------~~~---~~~l~ell~~aDvV~l~  254 (393)
T 2nac_A          188 DLEAMHVGTVAA-GRIGLAVLRRLAPFDV--HLHYTDRHRLPESVEKELN-------LTW---HATREDMYPVCDVVTLN  254 (393)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHGGGTC--EEEEECSSCCCHHHHHHHT-------CEE---CSSHHHHGGGCSEEEEC
T ss_pred             cCCCCEEEEEeE-CHHHHHHHHHHHhCCC--EEEEEcCCccchhhHhhcC-------cee---cCCHHHHHhcCCEEEEe
Confidence            345679999999 9999999999987676  899999875 222222111       111   13567889999999998


Q ss_pred             CC
Q 018512          118 AG  119 (354)
Q Consensus       118 ag  119 (354)
                      ..
T Consensus       255 ~P  256 (393)
T 2nac_A          255 CP  256 (393)
T ss_dssp             SC
T ss_pred             cC
Confidence            53

>2dc1_A L-aspartate dehydrogenase; NAD, oxidoreductase; HET: CIT NAD; 1.90A {Archaeoglobus fulgidus}

Probab=95.48  E-value=0.029  Score=50.00  Aligned_cols=56  Identities=25%  Similarity=0.375  Sum_probs=42.2

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEE-EEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhh-CCCcEEEEcC
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVL-HLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENAL-TGMDLVIIPA  118 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei-~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al-~~aDvVIi~a  118 (354)
                      |||+|||+ |.+|..++..|...+.  ++ .++|.++. .     ..        .+   +++++.+ .++|+||++.
T Consensus         1 m~vgiIG~-G~mG~~~~~~l~~~g~--~lv~v~d~~~~-~-----~~--------~~---~~~~~l~~~~~DvVv~~~   58 (236)
T 2dc1_A            1 MLVGLIGY-GAIGKFLAEWLERNGF--EIAAILDVRGE-H-----EK--------MV---RGIDEFLQREMDVAVEAA   58 (236)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTC--EEEEEECSSCC-C-----TT--------EE---SSHHHHTTSCCSEEEECS
T ss_pred             CEEEEECC-CHHHHHHHHHHhcCCC--EEEEEEecCcc-h-----hh--------hc---CCHHHHhcCCCCEEEECC
Confidence            69999999 9999999988886666  76 68998641 1     00        12   3567777 6999999984

>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A

Probab=95.46  E-value=0.024  Score=51.35  Aligned_cols=34  Identities=32%  Similarity=0.459  Sum_probs=30.4

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   78 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~   78 (354)
                      .||+|+|+ |.+|+.++..|+..|.. +|.++|.+.
T Consensus        29 ~~VlvvG~-GglG~~va~~La~~Gvg-~i~lvD~d~   62 (251)
T 1zud_1           29 SQVLIIGL-GGLGTPAALYLAGAGVG-TLVLADDDD   62 (251)
T ss_dssp             CEEEEECC-STTHHHHHHHHHHTTCS-EEEEECCCB
T ss_pred             CcEEEEcc-CHHHHHHHHHHHHcCCC-eEEEEeCCC
Confidence            48999999 99999999999999874 899999864

>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*

Probab=95.44  E-value=0.027  Score=54.09  Aligned_cols=78  Identities=23%  Similarity=0.215  Sum_probs=52.8

Q ss_pred             CCCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCch-hHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEc
Q 018512           39 GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP-GVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIP  117 (354)
Q Consensus        39 ~~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~-g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~  117 (354)
                      +.++.+|+|+|+ |.+|..++..+...|.  +|+.+|++... ..+.+.  ......+. .....++.+.++++|+||.+
T Consensus       165 ~l~g~~V~ViG~-G~iG~~~a~~a~~~Ga--~V~~~d~~~~~l~~~~~~--~g~~~~~~-~~~~~~l~~~l~~aDvVi~~  238 (377)
T 2vhw_A          165 GVEPADVVVIGA-GTAGYNAARIANGMGA--TVTVLDINIDKLRQLDAE--FCGRIHTR-YSSAYELEGAVKRADLVIGA  238 (377)
T ss_dssp             TBCCCEEEEECC-SHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHH--TTTSSEEE-ECCHHHHHHHHHHCSEEEEC
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhCCC--EEEEEeCCHHHHHHHHHh--cCCeeEec-cCCHHHHHHHHcCCCEEEEC
Confidence            345679999999 9999999999988887  89999997522 112221  11111111 11123566778999999998


Q ss_pred             CCCCC
Q 018512          118 AGVPR  122 (354)
Q Consensus       118 ag~~~  122 (354)
                      ++.|.
T Consensus       239 ~~~p~  243 (377)
T 2vhw_A          239 VLVPG  243 (377)
T ss_dssp             CCCTT
T ss_pred             CCcCC
Confidence            87664

>3pzr_A Aspartate-semialdehyde dehydrogenase; NADP, oxidoreductase-oxidoreductase inhibitor complex; HET: NAP; 1.75A {Vibrio cholerae} PDB: 1mc4_A 1mb4_A* 3q0e_A

Probab=95.39  E-value=0.033  Score=53.40  Aligned_cols=70  Identities=17%  Similarity=0.347  Sum_probs=44.1

Q ss_pred             CeEEEEcCCCchHHHHHH-HHHhCCC-CcEEEEEecCCchhHH-HHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcCC
Q 018512           43 FKVAILGAAGGIGQPLAM-LMKINPL-VSVLHLYDVVNTPGVT-ADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG  119 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~-~l~~~~~-~~ei~L~D~~~~~g~~-~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~ag  119 (354)
                      |||+|+||+|.+|.-+.. .|...+. ..++.++.... .|.. .++..  ....+..   ..+. +.++++|+||.+.|
T Consensus         1 ~~VaIvGATG~vG~ellr~lL~~hp~~~~~l~~~ss~~-aG~~~~~~~~--~~~~~~~---~~~~-~~~~~~Dvvf~a~~   73 (370)
T 3pzr_A            1 MRVGLVGWRGMVGSVLMQRMVEERDFDLIEPVFFSTSQ-IGVPAPNFGK--DAGMLHD---AFDI-ESLKQLDAVITCQG   73 (370)
T ss_dssp             CEEEEESCSSHHHHHHHHHHHHTTGGGGSEEEEEESSS-TTSBCCCSSS--CCCBCEE---TTCH-HHHTTCSEEEECSC
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCCCCceEEEEEeccc-cCcCHHHhCC--CceEEEe---cCCh-hHhccCCEEEECCC
Confidence            699999999999999998 7776663 35888876543 2211 11211  1111221   1232 55899999999854

>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*

Probab=95.36  E-value=0.033  Score=51.15  Aligned_cols=151  Identities=17%  Similarity=0.146  Sum_probs=81.6

Q ss_pred             CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEE-EEecCCchhHHHHHhcCCC--CCeEEEEeCCCcHHhhhCCCcEEEEc
Q 018512           41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLH-LYDVVNTPGVTADISHMDT--GAVVRGFLGQPQLENALTGMDLVIIP  117 (354)
Q Consensus        41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~-L~D~~~~~g~~~dl~~~~~--~~~v~~~~~~~d~~~al~~aDvVIi~  117 (354)
                      ++|||+|+|++|.+|+.++..+...+-. +|+ .+|.+.......|+.....  ...+..   ++|+++.++++|+||..
T Consensus         4 ~~mkV~V~Ga~G~mG~~~~~~~~~~~~~-elva~~d~~~~~~~g~d~~~~~g~~~~~v~~---~~dl~~~l~~~DvVIDf   79 (273)
T 1dih_A            4 ANIRVAIAGAGGRMGRQLIQAALALEGV-QLGAALEREGSSLLGSDAGELAGAGKTGVTV---QSSLDAVKDDFDVFIDF   79 (273)
T ss_dssp             CBEEEEETTTTSHHHHHHHHHHHHSTTE-ECCCEECCTTCTTCSCCTTCSSSSSCCSCCE---ESCSTTTTTSCSEEEEC
T ss_pred             CCcEEEEECCCCHHHHHHHHHHHhCCCC-EEEEEEecCchhhhhhhHHHHcCCCcCCcee---cCCHHHHhcCCCEEEEc
Confidence            4589999999999999999887754322 665 7887642100112222111  111222   24566778899999954


Q ss_pred             CCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCCchHHHHHHHHHhCCCCCCCEEEec-cch---HH
Q 018512          118 AGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVT-MLD---VV  193 (354)
Q Consensus       118 ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~~~~~~~~~~p~~kviG~t-~ld---~~  193 (354)
                      .. |               ....+.++.+.+.+.+   +++..| +..... .+.+.+...-- ..++... .+.   -.
T Consensus        80 t~-p---------------~~~~~~~~~a~~~G~~---vVigTt-G~~~e~-~~~L~~~a~~~-~vv~a~N~siGvn~~~  137 (273)
T 1dih_A           80 TR-P---------------EGTLNHLAFCRQHGKG---MVIGTT-GFDEAG-KQAIRDAAADI-AIVFAANFSVGVNVML  137 (273)
T ss_dssp             SC-H---------------HHHHHHHHHHHHTTCE---EEECCC-CCCHHH-HHHHHHHTTTS-CEEECSCCCHHHHHHH
T ss_pred             CC-h---------------HHHHHHHHHHHhCCCC---EEEECC-CCCHHH-HHHHHHhcCCC-CEEEEecCcHHHHHHH
Confidence            31 1               1334555666655544   445555 222211 12233332110 1233221 111   24


Q ss_pred             HHHHHHHHHhCCCCCCCcceEEeecCC
Q 018512          194 RANTFVAEVLGLDPRDVDVPVVGGHAG  220 (354)
Q Consensus       194 r~~~~la~~l~v~~~~v~~~v~G~hg~  220 (354)
                      ++-...|+.|+   .+.+..++--|+.
T Consensus       138 ~l~~~aa~~~~---~~~dieiiE~Hh~  161 (273)
T 1dih_A          138 KLLEKAAKVMG---DYTDIEIIEAHHR  161 (273)
T ss_dssp             HHHHHHHHHHT---TTSEEEEEEEECT
T ss_pred             HHHHHHHHhcC---CCCCEEEEEeecC
Confidence            56677888886   4567788888877

>3uw3_A Aspartate-semialdehyde dehydrogenase; structural genomics, seattle structural genomics center for infectious disease (ssgcid); 1.55A {Burkholderia thailandensis}

Probab=95.34  E-value=0.035  Score=53.37  Aligned_cols=71  Identities=15%  Similarity=0.311  Sum_probs=44.6

Q ss_pred             CCeEEEEcCCCchHHHHHH-HHHhCCC-CcEEEEEecCCchhHH-HHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcC
Q 018512           42 GFKVAILGAAGGIGQPLAM-LMKINPL-VSVLHLYDVVNTPGVT-ADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA  118 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~-~l~~~~~-~~ei~L~D~~~~~g~~-~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~a  118 (354)
                      ++||+|+||+|.+|.-+.. .|...+. ..++.++.... .|.. .++...  ...+..   .++. +.+.++|+||.+.
T Consensus         4 ~~~VaIvGATG~vG~ellr~lL~~hp~~~~~l~~~ss~~-aG~~~~~~~~~--~~~v~~---~~~~-~~~~~vDvvf~a~   76 (377)
T 3uw3_A            4 SMNVGLVGWRGMVGSVLMQRMQEEGDFDLIEPVFFSTSN-AGGKAPSFAKN--ETTLKD---ATSI-DDLKKCDVIITCQ   76 (377)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSC-TTSBCCTTCCS--CCBCEE---TTCH-HHHHTCSEEEECS
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhhCCCCceEEEEEechh-cCCCHHHcCCC--ceEEEe---CCCh-hHhcCCCEEEECC
Confidence            4799999999999999998 7776663 35888876543 1211 122111  111221   1232 5578999999985


Q ss_pred             C
Q 018512          119 G  119 (354)
Q Consensus       119 g  119 (354)
                      +
T Consensus        77 ~   77 (377)
T 3uw3_A           77 G   77 (377)
T ss_dssp             C
T ss_pred             C
Confidence            4

>2ozp_A N-acetyl-gamma-glutamyl-phosphate reductase; amino acid biosynthesis, structural genomics, riken structur genomics/proteomics initiative; 2.01A {Thermus thermophilus}

Probab=95.34  E-value=0.029  Score=53.28  Aligned_cols=72  Identities=18%  Similarity=0.238  Sum_probs=42.0

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCC-C-CeEEEEeCCCcHHhhhCCCcEEEEcCC
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDT-G-AVVRGFLGQPQLENALTGMDLVIIPAG  119 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~-~-~~v~~~~~~~d~~~al~~aDvVIi~ag  119 (354)
                      ++||+|+||+|.+|..++..|...+.. +|+.+-.....+...+-.+... . ..+..    .++. ++.++|+||++.+
T Consensus         4 ~~kV~IiGAtG~iG~~llr~L~~~p~~-elv~v~s~~~~g~~~~~~~~~~~g~~~~~~----~~~~-~~~~vDvV~~a~g   77 (345)
T 2ozp_A            4 KKTLSIVGASGYAGGEFLRLALSHPYL-EVKQVTSRRFAGEPVHFVHPNLRGRTNLKF----VPPE-KLEPADILVLALP   77 (345)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHTCTTE-EEEEEBCSTTTTSBGGGTCGGGTTTCCCBC----BCGG-GCCCCSEEEECCC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHcCCCc-EEEEEECchhhCchhHHhCchhcCcccccc----cchh-HhcCCCEEEEcCC
Confidence            479999998899999999988876543 6665543332221111001000 0 11211    1222 3789999999865

>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1

Probab=95.29  E-value=0.034  Score=52.25  Aligned_cols=68  Identities=19%  Similarity=0.201  Sum_probs=49.3

Q ss_pred             CCCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEec-CCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEc
Q 018512           39 GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDV-VNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIP  117 (354)
Q Consensus        39 ~~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~-~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~  117 (354)
                      .-..++|.|||. |.+|..++..+...|.  +|+.+|+ +.......++   .    +..   ..++++.+++||+|+++
T Consensus       143 ~l~g~~vgIIG~-G~IG~~~A~~l~~~G~--~V~~~d~~~~~~~~~~~~---g----~~~---~~~l~ell~~aDvVil~  209 (320)
T 1gdh_A          143 KLDNKTLGIYGF-GSIGQALAKRAQGFDM--DIDYFDTHRASSSDEASY---Q----ATF---HDSLDSLLSVSQFFSLN  209 (320)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHTTTC--EEEEECSSCCCHHHHHHH---T----CEE---CSSHHHHHHHCSEEEEC
T ss_pred             CCCCCEEEEECc-CHHHHHHHHHHHHCCC--EEEEECCCCcChhhhhhc---C----cEE---cCCHHHHHhhCCEEEEe
Confidence            345679999999 9999999999987776  9999999 7633222211   1    111   13567889999999998


Q ss_pred             CC
Q 018512          118 AG  119 (354)
Q Consensus       118 ag  119 (354)
                      ..
T Consensus       210 ~p  211 (320)
T 1gdh_A          210 AP  211 (320)
T ss_dssp             CC
T ss_pred             cc
Confidence            53

>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}

Probab=95.28  E-value=0.054  Score=50.06  Aligned_cols=98  Identities=20%  Similarity=0.248  Sum_probs=64.2

Q ss_pred             CCCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcC
Q 018512           39 GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA  118 (354)
Q Consensus        39 ~~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~a  118 (354)
                      ..+.++|.|||+ |.+|..++..+...|.  +|..+|++....  ..+....  ..  ... ..++++.+++||+||.+.
T Consensus       154 ~l~g~~v~IiG~-G~iG~~~a~~l~~~G~--~V~~~d~~~~~~--~~~~~~g--~~--~~~-~~~l~~~l~~aDvVi~~~  223 (300)
T 2rir_A          154 TIHGSQVAVLGL-GRTGMTIARTFAALGA--NVKVGARSSAHL--ARITEMG--LV--PFH-TDELKEHVKDIDICINTI  223 (300)
T ss_dssp             CSTTSEEEEECC-SHHHHHHHHHHHHTTC--EEEEEESSHHHH--HHHHHTT--CE--EEE-GGGHHHHSTTCSEEEECC
T ss_pred             CCCCCEEEEEcc-cHHHHHHHHHHHHCCC--EEEEEECCHHHH--HHHHHCC--Ce--EEc-hhhHHHHhhCCCEEEECC
Confidence            445679999999 9999999999988886  899999875211  1122221  11  111 235778899999999986


Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec-CCCCC
Q 018512          119 GVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS-NPVNS  164 (354)
Q Consensus       119 g~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~t-NPv~~  164 (354)
                      ..    ++-       |    .+   .+....|.+++++++ .|.+.
T Consensus       224 p~----~~i-------~----~~---~~~~mk~g~~lin~a~g~~~~  252 (300)
T 2rir_A          224 PS----MIL-------N----QT---VLSSMTPKTLILDLASRPGGT  252 (300)
T ss_dssp             SS----CCB-------C----HH---HHTTSCTTCEEEECSSTTCSB
T ss_pred             Ch----hhh-------C----HH---HHHhCCCCCEEEEEeCCCCCc
Confidence            53    111       0    01   223334788888886 67664

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	354
d1mlda2	169	d.162.1.1 (A:145-313) Malate dehydrogenase {Pig (S	2e-49
d2cmda2	167	d.162.1.1 (A:146-312) Malate dehydrogenase {Escher	3e-48
d1mlda1	144	c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus s	8e-43
d2cmda1	145	c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichi	3e-35
d1guza2	163	d.162.1.1 (A:143-305) Malate dehydrogenase {Chloro	5e-31
d7mdha1	175	c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (	5e-31
d1ojua1	142	c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon	1e-29
d1y7ta1	154	c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus th	3e-29
d1y6ja1	142	c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridi	3e-29
d1a5za1	140	c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermoto	5e-29
d1llda1	143	c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobac	8e-29
d1uxja2	164	d.162.1.1 (A:144-307) Malate dehydrogenase {Chloro	1e-28
d1o6za1	142	c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon	1e-28
d1guza1	142	c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium	2e-28
d5mdha1	154	c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus s	2e-28
d1uxja1	142	c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflex	3e-28
d1t2da1	150	c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria p	7e-27
d5mdha2	179	d.162.1.1 (A:155-333) Malate dehydrogenase {Pig (S	1e-25
d1ez4a1	146	c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobac	6e-25
d1ldma2	169	d.162.1.1 (A:161-329) Lactate dehydrogenase {Dogfi	1e-24
d1pzga1	154	c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplas	2e-24
d1ldna1	148	c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus	5e-24
d2ldxa1	159	c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mu	6e-24
d1llca2	172	d.162.1.1 (A:165-334) Lactate dehydrogenase {Lacto	1e-23
d1o6za2	161	d.162.1.1 (A:163-330) Malate dehydrogenase {Archae	3e-23
d1llda2	170	d.162.1.1 (A:150-319) Lactate dehydrogenase {Bifid	4e-23
d1i0za1	160	c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Ho	4e-23
d1ez4a2	171	d.162.1.1 (A:163-334) Lactate dehydrogenase {Lacto	5e-23
d2ldxa2	172	d.162.1.1 (A:160-331) Lactate dehydrogenase {Mouse	7e-23
d1hyea2	168	d.162.1.1 (A:146-313) MJ0490, lactate/malate dehyd	9e-23
d1a5za2	172	d.162.1.1 (A:164-333) Lactate dehydrogenase {Therm	9e-23
d1hyha2	163	d.162.1.1 (A:167-329) L-2-hydroxyisocapronate dehy	1e-22
d1ldna2	168	d.162.1.1 (A:163-330) Lactate dehydrogenase {Bacil	1e-22
d1hyea1	145	c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydroge	1e-22
d1i0za2	172	d.162.1.1 (A:161-332) Lactate dehydrogenase {Human	3e-22
d1hyha1	146	c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydro	4e-22
d1y6ja2	169	d.162.1.1 (A:149-317) Lactate dehydrogenase {Clost	3e-21
d1t2da2	165	d.162.1.1 (A:151-315) Lactate dehydrogenase {Malar	3e-21
d7mdha2	188	d.162.1.1 (A:198-385) Malate dehydrogenase {Sorghu	9e-20
d1y7ta2	173	d.162.1.1 (A:154-332) Malate dehydrogenase {Thermu	3e-19
d1pzga2	174	d.162.1.1 (A:164-334) Lactate dehydrogenase {Toxop	4e-19
d1up7a1	162	c.2.1.5 (A:1-162) 6-phospho-beta-glucosidase {Ther	8e-19
d1b8pa2	171	d.162.1.1 (A:159-329) Malate dehydrogenase {Aquasp	2e-18
d1s6ya1	169	c.2.1.5 (A:4-172) 6-phospho-beta-glucosidase {Baci	2e-16
d1u8xx1	167	c.2.1.5 (X:3-169) Maltose-6'-phosphate glucosidase	2e-16
d1obba1	171	c.2.1.5 (A:2-172) Alpha-glucosidase AglA {Thermoto	3e-14
d1ojua2	152	d.162.1.1 (A:164-331) Lactate dehydrogenase {Archa	9e-13

>d1mlda2 d.162.1.1 (A:145-313) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]} Length = 169

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

 Score =  161 bits (408), Expect = 2e-49
 Identities = 88/167 (52%), Positives = 116/167 (69%)

Query: 187 VTMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPCSFTQEETEYLTN 246
           VT LD+VRAN FVAE+ GLDP  V VPV+GGHAG TI+PL+SQ  P   F Q++   LT 
Sbjct: 1   VTTLDIVRANAFVAELKGLDPARVSVPVIGGHAGKTIIPLISQCTPKVDFPQDQLSTLTG 60

Query: 247 RIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECAFVASQVTELPFF 306
           RIQ  GTEVV+AKAGAGSATLSMAYA  +F  + +  + G  GVVEC+FV SQ T+ P+F
Sbjct: 61  RIQEAGTEVVKAKAGAGSATLSMAYAGARFVFSLVDAMNGKEGVVECSFVKSQETDCPYF 120

Query: 307 ASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSIQKGISFSK 353
           ++ + LG++G E+   +G ++ +E   + +A  EL  SI+KG  F K
Sbjct: 121 STPLLLGKKGIEKNLGIGKISPFEEKMIAEAIPELKASIKKGEEFVK 167

>d2cmda2 d.162.1.1 (A:146-312) Malate dehydrogenase {Escherichia coli [TaxId: 562]} Length = 167

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: Malate dehydrogenase
species: Escherichia coli [TaxId: 562]

 Score =  158 bits (401), Expect = 3e-48
 Identities = 87/168 (51%), Positives = 110/168 (65%), Gaps = 1/168 (0%)

Query: 187 VTMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPCSFTQEETEYLTN 246
           VT LD++R+NTFVAE+ G  P +V+VPV+GGH+GVTILPLLSQV     FT++E   LT 
Sbjct: 1   VTTLDIIRSNTFVAELKGKQPGEVEVPVIGGHSGVTILPLLSQVPGVS-FTEQEVADLTK 59

Query: 247 RIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECAFVASQVTELPFF 306
           RIQN GTEVVEAKAG GSATLSM  AA +F  + +R L+G+ GVVECA+V        FF
Sbjct: 60  RIQNAGTEVVEAKAGGGSATLSMGQAAARFGLSLVRALQGEQGVVECAYVEGDGQYARFF 119

Query: 307 ASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSIQKGISFSKK 354
           +  + LG+ G EE   +G L+ +E+  LE     L   I  G  F  K
Sbjct: 120 SQPLLLGKNGVEERKSIGTLSAFEQNALEGMLDTLKKDIALGQEFVNK 167

>d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]} Length = 144

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

 Score =  143 bits (362), Expect = 8e-43
 Identities = 92/143 (64%), Positives = 115/143 (80%)

Query: 44  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQ 103
           KVA+LGA+GGIGQPL++L+K +PLVS L LYD+ +TPGV AD+SH++T A V+G+LG  Q
Sbjct: 2   KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVAADLSHIETRATVKGYLGPEQ 61

Query: 104 LENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVN 163
           L + L G D+V+IPAGVPRKPGMTRDDLFN NA IV TL    A+ CP+A + +ISNPVN
Sbjct: 62  LPDCLKGCDVVVIPAGVPRKPGMTRDDLFNTNATIVATLTAACAQHCPDAMICIISNPVN 121

Query: 164 STVPIAAEVFKKAGTYDPKKLLG 186
           ST+PI AEVFKK G Y+P K+ G
Sbjct: 122 STIPITAEVFKKHGVYNPNKIFG 144

>d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]} Length = 145

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Escherichia coli [TaxId: 562]

 Score =  123 bits (311), Expect = 3e-35
 Identities = 84/145 (57%), Positives = 103/145 (71%), Gaps = 3/145 (2%)

Query: 44  KVAILGAAGGIGQPLAMLMKIN-PLVSVLHLYDVVN-TPGVTADISHMDTGAVVRGFLGQ 101
           KVA+LGAAGGIGQ LA+L+K   P  S L LYD+   TPGV  D+SH+ T   ++GF G+
Sbjct: 2   KVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPVTPGVAVDLSHIPTAVKIKGFSGE 61

Query: 102 PQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNP 161
                AL G D+V+I AGV RKPGM R DLFN+NAGIV+ L + +AK CP A + +I+NP
Sbjct: 62  -DATPALEGADVVLISAGVRRKPGMDRSDLFNVNAGIVKNLVQQVAKTCPKACIGIITNP 120

Query: 162 VNSTVPIAAEVFKKAGTYDPKKLLG 186
           VN+TV IAAEV KKAG YD  KL G
Sbjct: 121 VNTTVAIAAEVLKKAGVYDKNKLFG 145

>d1guza2 d.162.1.1 (A:143-305) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]} Length = 163

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: Malate dehydrogenase
species: Chlorobium vibrioforme [TaxId: 1098]

 Score =  113 bits (283), Expect = 5e-31
 Identities = 39/163 (23%), Positives = 71/163 (43%), Gaps = 7/163 (4%)

Query: 189 MLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPCS----FTQEETEYL 244
           +LD  R  +F+A  LG+  +D++  V+GGH    +  +                E  + L
Sbjct: 3   VLDAARFRSFIAMELGVSMQDINACVLGGHGDAMVPVVKYTTVAGIPISDLLPAETIDKL 62

Query: 245 TNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECAFVASQVTELP 304
             R +NGG E+VE     GSA  + A + V+  ++     R                +  
Sbjct: 63  VERTRNGGAEIVEH-LKQGSAFYAPASSVVEMVESI-VLDRKRVLPCAVGLEGQYGIDKT 120

Query: 305 FFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSIQK 347
           F    V+LGR G E+I+++  L++ +   L+K+ K +  + + 
Sbjct: 121 FVGVPVKLGRNGVEQIYEI-NLDQADLDLLQKSAKIVDENCKM 162

>d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]} Length = 175

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]

 Score =  113 bits (284), Expect = 5e-31
 Identities = 27/137 (19%), Positives = 47/137 (34%), Gaps = 9/137 (6%)

Query: 44  KVAILGAAGGIGQPLAMLMKINPL-----VSVLHLYDVVNTPGVTADISHMDTGA---VV 95
            +A+ GAAG I   L   +    +        L L     +      ++     +   ++
Sbjct: 26  NIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSLYPLL 85

Query: 96  RGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAK-CCPNAT 154
           R              +D  ++    PR PGM R  L +IN  I     + +      N  
Sbjct: 86  REVSIGIDPYEVFEDVDWALLIGAKPRGPGMERAALLDINGQIFADQGKALNAVASKNVK 145

Query: 155 VNLISNPVNSTVPIAAE 171
           V ++ NP N+   I  +
Sbjct: 146 VLVVGNPCNTNALICLK 162

>d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Length = 142

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

 Score =  108 bits (272), Expect = 1e-29
 Identities = 38/146 (26%), Positives = 70/146 (47%), Gaps = 7/146 (4%)

Query: 44  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP--GVTADISHMDTGAVVRGFLGQ 101
           K+  +GA G +G   A    +N  V  + L D+      G   D++H   G      +  
Sbjct: 2   KLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVG 60

Query: 102 PQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNP 161
               + L G +++++ AG+ RKPGMTR DL + NAGI++ + + I +  P + + +++NP
Sbjct: 61  GADYSLLKGSEIIVVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVTNP 120

Query: 162 VNSTVPIAAEVFKKAGTYDPKKLLGV 187
           ++    I      K       ++ G+
Sbjct: 121 MDVMTYIM----WKESGKPRNEVFGM 142

>d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]} Length = 154

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

 Score =  108 bits (270), Expect = 3e-29
 Identities = 33/149 (22%), Positives = 56/149 (37%), Gaps = 12/149 (8%)

Query: 44  KVAILGAAGGIGQPLAMLMKINPLVS--------VLHLYDVVNTPGVTADISHMDTGAVV 95
           +VA+ GAAG IG  L   +    ++         +L +   +                ++
Sbjct: 6   RVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFPLL 65

Query: 96  RGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAK-CCPNAT 154
            G       + A    D  ++    PRK GM R DL  +N  I       +A+    +  
Sbjct: 66  AGLEATDDPKVAFKDADYALLVGAAPRKAGMERRDLLQVNGKIFTEQGRALAEVAKKDVK 125

Query: 155 VNLISNPVNSTVPIAAEVFKKAGTYDPKK 183
           V ++ NP N+   IA   +K A   +P+ 
Sbjct: 126 VLVVGNPANTNALIA---YKNAPGLNPRN 151

>d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]} Length = 142

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Clostridium thermocellum [TaxId: 1515]

 Score =  107 bits (269), Expect = 3e-29
 Identities = 36/143 (25%), Positives = 61/143 (42%), Gaps = 5/143 (3%)

Query: 44  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQ 103
           KVAI+GA G +G   A  M +    + L L DV     +   +        +        
Sbjct: 3   KVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYAG 61

Query: 104 LENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVN 163
             + +   D++++ AG  RKPG TR DL   N  I + + + I K   +  + ++SNPV+
Sbjct: 62  DYSDVKDCDVIVVTAGANRKPGETRLDLAKKNVMIAKEVTQNIMKYYNHGVILVVSNPVD 121

Query: 164 STVPIAAEVFKKAGTYDPKKLLG 186
               +     +K       K++G
Sbjct: 122 IITYMI----QKWSGLPVGKVIG 140

>d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]} Length = 140

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

 Score =  107 bits (267), Expect = 5e-29
 Identities = 39/143 (27%), Positives = 65/143 (45%), Gaps = 5/143 (3%)

Query: 44  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQ 103
           K+ I+G  G +G   A  + +      + L DV         +  +      R       
Sbjct: 2   KIGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYAG 60

Query: 104 LENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVN 163
               L G D+VI+ AGVP+KPG TR  L   NA +++ +   ++K  P++ V +++NPV+
Sbjct: 61  DYADLKGSDVVIVAAGVPQKPGETRLQLLGRNARVMKEIARNVSKYAPDSIVIVVTNPVD 120

Query: 164 STVPIAAEVFKKAGTYDPKKLLG 186
               +    F K    DP+K+ G
Sbjct: 121 ----VLTYFFLKESGMDPRKVFG 139

>d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]} Length = 143

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]

 Score =  106 bits (266), Expect = 8e-29
 Identities = 39/145 (26%), Positives = 62/145 (42%), Gaps = 8/145 (5%)

Query: 44  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLGQ 101
           K+A++GA G +G  LA       +   + L D+          D+ H  +        G 
Sbjct: 3   KLAVIGA-GAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGS 61

Query: 102 PQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNP 161
              E      D+V+I AG  +KPG +R +L      I++ +   + K  PNA   LI+NP
Sbjct: 62  DDPE-ICRDADMVVITAGPRQKPGQSRLELVGATVNILKAIMPNLVKVAPNAIYMLITNP 120

Query: 162 VNSTVPIAAEVFKKAGTYDPKKLLG 186
           V+    IA  V +K       ++ G
Sbjct: 121 VD----IATHVAQKLTGLPENQIFG 141

>d1uxja2 d.162.1.1 (A:144-307) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]} Length = 164

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: Malate dehydrogenase
species: Chloroflexus aurantiacus [TaxId: 1108]

 Score =  107 bits (267), Expect = 1e-28
 Identities = 40/163 (24%), Positives = 66/163 (40%), Gaps = 7/163 (4%)

Query: 189 MLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPCSFTQEETEY----L 244
           +LD  R  TF+A   G+  +DV   ++GGH    +             ++         +
Sbjct: 3   VLDAARYRTFIAMEAGVSVKDVQAMLMGGHGDEMVPLPRFSTISGIPVSEFIAPDRLAQI 62

Query: 245 TNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECAFVASQVTELP 304
             R + GG E+V      GSA  + A A  +  +A L+  +    V         + ++ 
Sbjct: 63  VERTRKGGGEIVNLLKT-GSAYYAPAAATAQMVEAVLKDKKRVMPVAAYLTGQYGLNDIY 121

Query: 305 FFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSIQK 347
           F    V LG  G E+I +L PLNE E   L  + K +  ++  
Sbjct: 122 FG-VPVILGAGGVEKILEL-PLNEEEMALLNASAKAVRATLDT 162

>d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]} Length = 142

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Haloarcula marismortui [TaxId: 2238]

 Score =  106 bits (265), Expect = 1e-28
 Identities = 38/147 (25%), Positives = 66/147 (44%), Gaps = 10/147 (6%)

Query: 44  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN----TPGVTADISHMDTGAVVRGFL 99
           KV+++GAAG +G      + +  +   +   D+ +    T G  AD +H    A      
Sbjct: 2   KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNH--GIAYDSNTR 59

Query: 100 GQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS 159
            +        G D+V+I AG+PR+PG TR DL   NA I+  +   + +   +      S
Sbjct: 60  VRQGGYEDTAGSDVVVITAGIPRQPGQTRIDLAGDNAPIMEDIQSSLDEHNDDYISLTTS 119

Query: 160 NPVNSTVPIAAEVFKKAGTYDPKKLLG 186
           NPV+    +      +AG    ++++G
Sbjct: 120 NPVD----LLNRHLYEAGDRSREQVIG 142

>d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]} Length = 142

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chlorobium vibrioforme [TaxId: 1098]

 Score =  105 bits (263), Expect = 2e-28
 Identities = 43/146 (29%), Positives = 68/146 (46%), Gaps = 7/146 (4%)

Query: 44  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLGQ 101
           K+ ++GA G +G   A  +    L   L L DVV     G   D+       +    +  
Sbjct: 2   KITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTG 60

Query: 102 PQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNP 161
                     D+VII AG+PRKPGMTR+DL   NAGIV+ + + I K   N  + ++SNP
Sbjct: 61  SNDYADTANSDIVIITAGLPRKPGMTREDLLMKNAGIVKEVTDNIMKHSKNPIIIVVSNP 120

Query: 162 VNSTVPIAAEVFKKAGTYDPKKLLGV 187
           ++    +A            ++++G+
Sbjct: 121 LDIMTHVA----WVRSGLPKERVIGM 142

>d5mdha1 c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]} Length = 154

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

 Score =  105 bits (264), Expect = 2e-28
 Identities = 30/141 (21%), Positives = 53/141 (37%), Gaps = 9/141 (6%)

Query: 44  KVAILGAAGGIGQPLAML-----MKINPLVSVLHLYDVVNTPGVTADISHMDTGAVV--- 95
           +V + GAAG I   L        +       +L L D+    GV   +        +   
Sbjct: 5   RVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPLL 64

Query: 96  RGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATV 155
           +  +   + E A   +D+ I+   +PR+ GM R DL   N  I +     + K    +  
Sbjct: 65  KDVIATDKEEIAFKDLDVAILVGSMPRRDGMERKDLLKANVKIFKCQGAALDKYAKKSVK 124

Query: 156 NL-ISNPVNSTVPIAAEVFKK 175
            + + NP N+    A++    
Sbjct: 125 VIVVGNPANTNCLTASKSAPS 145

>d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]} Length = 142

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chloroflexus aurantiacus [TaxId: 1108]

 Score =  105 bits (262), Expect = 3e-28
 Identities = 39/144 (27%), Positives = 69/144 (47%), Gaps = 6/144 (4%)

Query: 44  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP-GVTADISHMDTGAVVRGFLGQP 102
           K++I+GA G +G   A  +    L  ++ L  V   P G   D+            +   
Sbjct: 3   KISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGT 61

Query: 103 QLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPV 162
                    D++++ +G PRKPGM+R+DL  +NA I R      A   PNA + +++NP+
Sbjct: 62  NNYADTANSDVIVVTSGAPRKPGMSREDLIKVNADITRACISQAAPLSPNAVIIMVNNPL 121

Query: 163 NSTVPIAAEVFKKAGTYDPKKLLG 186
           ++   +AAEV      +  ++++G
Sbjct: 122 DAMTYLAAEVSG----FPKERVIG 141

>d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 150

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

 Score =  101 bits (253), Expect = 7e-27
 Identities = 45/154 (29%), Positives = 72/154 (46%), Gaps = 11/154 (7%)

Query: 40  AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP-GVTADISHMDTGAVVRGF 98
           A   K+ ++G+ G IG  +A L+    L  V+    V N P G   D SH +  A     
Sbjct: 1   APKAKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCK 59

Query: 99  LGQPQLENALTGMDLVIIPAGVPRKPGMT-----RDDLFNINAGIVRTLCEGIAKCCPNA 153
           +      + L G D+VI+ AG  + PG +     RDDL  +N  I+  +   I K CPNA
Sbjct: 60  VSGSNTYDDLAGADVVIVTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKNCPNA 119

Query: 154 TVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV 187
            + +++NPV+  V +      +       K++G+
Sbjct: 120 FIIVVTNPVDVMVQLL----HQHSGVPKNKIIGL 149

>d5mdha2 d.162.1.1 (A:155-333) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]} Length = 179

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

 Score = 99.4 bits (247), Expect = 1e-25
 Identities = 33/176 (18%), Positives = 57/176 (32%), Gaps = 13/176 (7%)

Query: 188 TMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPCSFTQEETEYLTNR 247
           T LD  RA   +A  LG+   DV   ++ G+   T  P ++  K      +         
Sbjct: 1   TRLDHNRAKAQIALKLGVTSDDVKNVIIWGNHSSTQYPDVNHAKVKLQAKEVGVYEAVKD 60

Query: 248 IQNGGTEVVEAKAGAG---------SATLSMAYAAVKFADACLRGLRGDAGVVECAFVAS 298
                 E +      G         S+ +S A A          G      V        
Sbjct: 61  DSWLKGEFITTVQQRGAAVIKARKLSSAMSAAKAICDHVRDIWFGTPEGEFVSMGIISDG 120

Query: 299 Q---VTELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSIQKGISF 351
               V +   ++  V +  +  + +  L P+N++ R  ++   KELA   +    F
Sbjct: 121 NSYGVPDDLLYSFPVTIKDKTWKIVEGL-PINDFSREKMDLTAKELAEEKETAFEF 175

>d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]} Length = 146

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Lactobacillus pentosus [TaxId: 1589]

 Score = 96.6 bits (240), Expect = 6e-25
 Identities = 34/143 (23%), Positives = 58/143 (40%), Gaps = 5/143 (3%)

Query: 44  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQ 103
           KV ++G  G +G   A  M    +     + DVV        +   D  A          
Sbjct: 7   KVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYSG 65

Query: 104 LENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVN 163
             +     DLV+I AG P+KPG +R DL N N  I+ ++ + +     +    + +NPV+
Sbjct: 66  EYSDCKDADLVVITAGAPQKPGESRLDLVNKNLNILSSIVKPVVDSGFDGIFLVAANPVD 125

Query: 164 STVPIAAEVFKKAGTYDPKKLLG 186
               I      K   +  ++++G
Sbjct: 126 ----ILTYATWKFSGFPKERVIG 144

>d1ldma2 d.162.1.1 (A:161-329) Lactate dehydrogenase {Dogfish (Squalus acanthias) [TaxId: 7797]} Length = 169

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: Lactate dehydrogenase
species: Dogfish (Squalus acanthias) [TaxId: 7797]

 Score = 96.5 bits (239), Expect = 1e-24
 Identities = 27/169 (15%), Positives = 50/169 (29%), Gaps = 7/169 (4%)

Query: 188 TMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPCSFTQ-----EETE 242
             LD  R    + E LG+        V+G H                         ++ +
Sbjct: 3   CNLDSARFRYLMGERLGVHSCSCHGWVIGEHGDSVPSVWSGMNVASIKLHPLDGTNKDKQ 62

Query: 243 YLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECAFVASQVTE 302
                 ++      E     G  + ++  +    A+  ++ L     V         + +
Sbjct: 63  DWKKLHKDVVDSAYEVIKLKGYTSWAIGLSVADLAETIMKNLCRVHPVSTMVKDFYGIKD 122

Query: 303 LPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSIQKGISF 351
             F +    L   G   I ++  L   E   L+K+   L   IQK + F
Sbjct: 123 NVFLSLPCVLNDHGISNIVKM-KLKPNEEQQLQKSATTLW-DIQKDLKF 169

>d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]} Length = 154

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Toxoplasma gondii [TaxId: 5811]

 Score = 95.1 bits (236), Expect = 2e-24
 Identities = 43/150 (28%), Positives = 70/150 (46%), Gaps = 12/150 (8%)

Query: 44  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTA-DISHMDTGAVVRGFLGQP 102
           KVA++G+ G IG  +  L  +  L  V+    V   P   A D+SH+ +       +   
Sbjct: 9   KVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRAE 67

Query: 103 -QLENALTGMDLVIIPAGVPRKPG-----MTRDDLFNINAGIVRTLCEGIAKCCPNATVN 156
              E ALTG D VI+ AG+ + PG      +R+DL   N+ I+R + + I K CP   + 
Sbjct: 68  YSYEAALTGADCVIVTAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKYCPKTFII 127

Query: 157 LISNPVNSTVPIAAEVFKKAGTYDPKKLLG 186
           +++NP++  V +  E            + G
Sbjct: 128 VVTNPLDCMVKVMCEASG----VPTNMICG 153

>d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} Length = 148

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

 Score = 94.0 bits (233), Expect = 5e-24
 Identities = 34/147 (23%), Positives = 59/147 (40%), Gaps = 8/147 (5%)

Query: 42  GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTA--DISHMDTGAVVRGFL 99
           G +V ++GA G +G      +    +   + L D   +  +    D +H    A     +
Sbjct: 6   GARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDI 64

Query: 100 GQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS 159
                +      DLV+I AG  +KPG TR DL + N  I R++ E +          + +
Sbjct: 65  WHGDYD-DCRDADLVVICAGANQKPGETRLDLVDKNIAIFRSIVESVMASGFQGLFLVAT 123

Query: 160 NPVNSTVPIAAEVFKKAGTYDPKKLLG 186
           NPV+    I      K      ++++G
Sbjct: 124 NPVD----ILTYATWKFSGLPHERVIG 146

>d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]} Length = 159

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 94.3 bits (234), Expect = 6e-24
 Identities = 33/145 (22%), Positives = 60/145 (41%), Gaps = 8/145 (5%)

Query: 44  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP--GVTADISHMDTGAVVRGFLGQ 101
           K+ ++G  G +G   A+ + +  L   L L D       G   D+ H     +    +  
Sbjct: 21  KITVVGV-GDVGMACAISILLKGLADELALVDADTDKLRGEALDLQHGSL-FLSTPKIVF 78

Query: 102 PQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNP 161
            +  N      LVII AG     G TR DL   N  I++ +  G+ +  P+  + +++NP
Sbjct: 79  GKDYNVSANSKLVIITAGARMVSGQTRLDLLQRNVAIMKAIVPGVIQNSPDCKIIVVTNP 138

Query: 162 VNSTVPIAAEVFKKAGTYDPKKLLG 186
           V+    +      K   +   +++G
Sbjct: 139 VDILTYVVW----KISGFPVGRVIG 159

>d1llca2 d.162.1.1 (A:165-334) Lactate dehydrogenase {Lactobacillus casei [TaxId: 1582]} Length = 172

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: Lactate dehydrogenase
species: Lactobacillus casei [TaxId: 1582]

 Score = 93.7 bits (232), Expect = 1e-23
 Identities = 29/174 (16%), Positives = 67/174 (38%), Gaps = 17/174 (9%)

Query: 188 TMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILP----------LLSQVKPPCSFT 237
           T LD  R    +AE++ +D R V   ++G H                 +   VK      
Sbjct: 1   TSLDTARFRQSIAEMVNVDARSVHAYIMGEHGDTEFPVWSHANIGGVTIAEWVKAHPEIK 60

Query: 238 QEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECAFVA 297
           +++   +   +++   E+++ K   G+    +A A  + + A L        +    ++ 
Sbjct: 61  EDKLVKMFEDVRDAAYEIIKLK---GATFYGIATALARISKAILNDENAV--LPLSVYMD 115

Query: 298 SQVTEL-PFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSIQKGIS 350
            Q      +  +   + R G + I ++ PL ++E   ++K+  +L   +    +
Sbjct: 116 GQYGINDLYIGTPAVINRNGIQNILEI-PLTDHEEESMQKSASQLKKVLTDAFA 168

>d1o6za2 d.162.1.1 (A:163-330) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]} Length = 161

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: Malate dehydrogenase
species: Archaeon Haloarcula marismortui [TaxId: 2238]

 Score = 92.6 bits (229), Expect = 3e-23
 Identities = 29/160 (18%), Positives = 57/160 (35%), Gaps = 3/160 (1%)

Query: 188 TMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPCSFTQEETEYLTNR 247
             LD  R    ++E      ++V+  ++G H G   +P+ S+V    +  +   +     
Sbjct: 3   GRLDSARFRYVLSEEFDAPVQNVEGTILGEH-GDAQVPVFSKVSVDGTDPEFSGDEKEQL 61

Query: 248 IQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECAFVASQVTELPFFA 307
           + +     ++     G+     A       +A L                    +   F 
Sbjct: 62  LGDLQESAMDVIERKGATEWGPARGVAHMVEAILHDTGEVLPASVKLEGEFGHED-TAFG 120

Query: 308 SKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSIQK 347
             V LG  G EEI +   L++YE+  +  A ++L+    K
Sbjct: 121 VPVSLGSNGVEEIVEW-DLDDYEQDLMADAAEKLSDQYDK 159

>d1llda2 d.162.1.1 (A:150-319) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]} Length = 170

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: Lactate dehydrogenase
species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]

 Score = 92.2 bits (228), Expect = 4e-23
 Identities = 26/172 (15%), Positives = 58/172 (33%), Gaps = 17/172 (9%)

Query: 188 TMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPCS------------ 235
           T LD  R    +A+  G++ ++V   + G H    +    S                   
Sbjct: 1   TNLDSARLRFLIAQQTGVNVKNVHAYIAGEHGDSEVPLWESATIGGVPMSDWTPLPGHDP 60

Query: 236 FTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECAF 295
              ++ E +   ++N   +++  K     A   +  + V   +A L        V     
Sbjct: 61  LDADKREEIHQEVKNAAYKIINGKGATNYA---IGMSGVDIIEAVLHDTNRILPVSSMLK 117

Query: 296 VASQVTELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSIQK 347
               ++++        L RQG        P+++ E   L+++ + L  +  +
Sbjct: 118 DFHGISDICMS-VPTLLNRQGVNNTINT-PVSDKELAALKRSAETLKETAAQ 167

>d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]} Length = 160

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]

 Score = 92.0 bits (228), Expect = 4e-23
 Identities = 30/145 (20%), Positives = 58/145 (40%), Gaps = 8/145 (5%)

Query: 44  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLGQ 101
           K+ ++G  G +G   A+ +    L   L L DV+     G   D+ H          +  
Sbjct: 22  KITVVGV-GQVGMACAISILGKSLADELALVDVLEDKLKGEMMDLQHGSLFLQTPKIVAD 80

Query: 102 PQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNP 161
                      +V++ AGV ++ G +R +L   N  + + +   I K  P+  + ++SNP
Sbjct: 81  KDYS-VTANSKIVVVTAGVRQQEGESRLNLVQRNVNVFKFIIPQIVKYSPDCIIIVVSNP 139

Query: 162 VNSTVPIAAEVFKKAGTYDPKKLLG 186
           V+    +      K       +++G
Sbjct: 140 VDILTYVT----WKLSGLPKHRVIG 160

>d1ez4a2 d.162.1.1 (A:163-334) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]} Length = 171

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: Lactate dehydrogenase
species: Lactobacillus pentosus [TaxId: 1589]

 Score = 92.2 bits (228), Expect = 5e-23
 Identities = 27/170 (15%), Positives = 53/170 (31%), Gaps = 8/170 (4%)

Query: 188 TMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVK---PPCSFTQEETEYL 244
           T LD  R    + +   +DPR VD  ++G H G +     S       P     +E    
Sbjct: 1   TSLDSSRLRVALGKQFNVDPRSVDAYIMGEH-GDSEFAAYSTATIGTRPVRDVAKEQGVS 59

Query: 245 TNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECAFVASQVT--- 301
            + +      V        +   +  Y          + +  D   V             
Sbjct: 60  DDDLAKLEDGVRNKAYDIINLKGATFYGIGTALMRISKAILRDENAVLPVGAYMDGQYGL 119

Query: 302 ELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSIQKGISF 351
              +  +   +G  G ++I +  PL+  E   ++ +   L   +  G++ 
Sbjct: 120 NDIYIGTPAIIGGTGLKQIIES-PLSADELKKMQDSAATLKKVLNDGLAE 168

>d2ldxa2 d.162.1.1 (A:160-331) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]} Length = 172

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: Lactate dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 91.8 bits (227), Expect = 7e-23
 Identities = 28/170 (16%), Positives = 56/170 (32%), Gaps = 10/170 (5%)

Query: 188 TMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPCSFTQ--------E 239
             LD  R    + E LG++P      V+G H   ++           +           +
Sbjct: 3   CNLDSARFRYLIGEKLGVNPTSCHGWVLGEHGDSSVPIWSGVNVAGVTLKSLNPAIGTDK 62

Query: 240 ETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECAFVASQ 299
             ++  N  +       E     G  + ++  +    A + L+ L+    V         
Sbjct: 63  NKQHWKNVHKQVVEGGYEVLDMKGYTSWAIGLSVTDLARSILKNLKRVHPVTTLVKGFHG 122

Query: 300 VTELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSIQKGI 349
           + E  F +    LG  G  +  ++  +   E   L+K+   L   +QK +
Sbjct: 123 IKEEVFLSIPCVLGESGITDFVKV-NMTAEEEGLLKKSADTLWN-MQKNL 170

>d1hyea2 d.162.1.1 (A:146-313) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]} Length = 168

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: MJ0490, lactate/malate dehydrogenase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

 Score = 91.4 bits (226), Expect = 9e-23
 Identities = 28/164 (17%), Positives = 57/164 (34%), Gaps = 6/164 (3%)

Query: 188 TMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPCSFTQEETEYLTNR 247
           T LD +R    +A+  G+   +V   ++G H G +++PLLS         Q+   +    
Sbjct: 3   THLDSLRFKVAIAKFFGVHIDEVRTRIIGEH-GDSMVPLLSATSIGGIPIQKFERFKELP 61

Query: 248 IQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECAFVASQ----VTEL 303
           I     +V               +         +R +  +   +                
Sbjct: 62  IDEIIEDVKTKGEQIIRLKGGSEFGPAAAILNVVRCIVNNEKRLLTLSAYVDGEFDGIRD 121

Query: 304 PFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSIQK 347
                 V++GR G EE+  +  L++ E I   K+ + +    ++
Sbjct: 122 VCIGVPVKIGRDGIEEVVSI-ELDKDEIIAFRKSAEIIKKYCEE 164

>d1a5za2 d.162.1.1 (A:164-333) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]} Length = 172

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: Lactate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

 Score = 91.5 bits (226), Expect = 9e-23
 Identities = 35/174 (20%), Positives = 59/174 (33%), Gaps = 15/174 (8%)

Query: 188 TMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPP----------CSFT 237
           T+LD  R  T +A+  G  PR V V V+G H    +      +                 
Sbjct: 2   TVLDTARLRTLIAQHCGFSPRSVHVYVIGEHGDSEVPVWSGAMIGGIPLQNMCQVCQKCD 61

Query: 238 QEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECAFVA 297
            +  E    + +    E++E K     A        V+      + +   +  +E     
Sbjct: 62  SKILENFAEKTKRAAYEIIERKGATHYAIALAVADIVESIFFDEKRVLTLSVYLEDYLGV 121

Query: 298 SQVTELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSIQKGISF 351
             +      +  V LG+ G E I +L  LNE E     K+   L  +I +  + 
Sbjct: 122 KDL----CISVPVTLGKHGVERILEL-NLNEEELEAFRKSASILKNAINEITAE 170

>d1hyha2 d.162.1.1 (A:167-329) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]} Length = 163

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH
species: Lactobacillus confusus [TaxId: 1583]

 Score = 91.1 bits (225), Expect = 1e-22
 Identities = 28/162 (17%), Positives = 49/162 (30%), Gaps = 3/162 (1%)

Query: 188 TMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPCSFTQEETEYLTNR 247
           T+LD  R    V E   LDPR V    +G H G +     S V+          +     
Sbjct: 2   TLLDTARMQRAVGEAFDLDPRSVSGYNLGEH-GNSQFVAWSTVRVMGQPIVTLADAGDID 60

Query: 248 IQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECAFVASQVTELPFFA 307
           +     E  +      +     +Y     A    + +  DA                + +
Sbjct: 61  LAAIEEEARKGGFTVLNGKGYTSYGVATSAIRIAKAVMADAHAELVVSNRRDDMG-MYLS 119

Query: 308 SKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSIQKGI 349
               +GR G      L  L   E+  L +++  +     + +
Sbjct: 120 YPAIIGRDGVLAETTL-DLTTDEQEKLLQSRDYIQQRFDEIV 160

>d1ldna2 d.162.1.1 (A:163-330) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} Length = 168

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: Lactate dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

 Score = 91.1 bits (225), Expect = 1e-22
 Identities = 20/173 (11%), Positives = 55/173 (31%), Gaps = 15/173 (8%)

Query: 188 TMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPCSFTQ--------- 238
           T+LD  R    + E   + P++V   ++G H    +              +         
Sbjct: 1   TILDTARFRFLLGEYFSVAPQNVHAYIIGEHGDTELPVWSQAYIGVMPIRKLVESKGEEA 60

Query: 239 -EETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECAFVA 297
            ++ E +   +++   +++E K               +        +   +  ++  +  
Sbjct: 61  QKDLERIFVNVRDAAYQIIEKKGATYYGIAMGLARVTRAILHNENAILTVSAYLDGLYGE 120

Query: 298 SQVTELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSIQKGIS 350
             V    +      + R G  E+ ++  LN+ E+     +   L   + +  +
Sbjct: 121 RDV----YIGVPAVINRNGIREVIEI-ELNDDEKNRFHHSAATLKSVLARAFT 168

>d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]} Length = 145

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: MJ0490, lactate/malate dehydrogenase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

 Score = 90.2 bits (223), Expect = 1e-22
 Identities = 43/149 (28%), Positives = 68/149 (45%), Gaps = 11/149 (7%)

Query: 44  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYD----VVNTPGVTADISHMDTGAVV--RG 97
           KV I+GA+G +G   A+L+   P +  L L      +    G+  DI     G       
Sbjct: 2   KVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANI 61

Query: 98  FLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNL 157
           ++   +    +   D+VII +GVPRK GM+R DL   NA IV    + IA+ C    + +
Sbjct: 62  YVESDENLRIIDESDVVIITSGVPRKEGMSRMDLAKTNAKIVGKYAKKIAEICDTK-IFV 120

Query: 158 ISNPVNSTVPIAAEVFKKAGTYDPKKLLG 186
           I+NPV+     A         ++  ++ G
Sbjct: 121 ITNPVDVMTYKAL----VDSKFERNQVFG 145

>d1i0za2 d.162.1.1 (A:161-332) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]} Length = 172

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: Lactate dehydrogenase
species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]

 Score = 89.9 bits (222), Expect = 3e-22
 Identities = 33/174 (18%), Positives = 58/174 (33%), Gaps = 18/174 (10%)

Query: 188 TMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPCSFTQ--------- 238
             LD  R    +AE LG+ P      ++G H G + + + S V       Q         
Sbjct: 3   CNLDSARFRYLMAEKLGIHPSSCHGWILGEH-GDSSVAVWSGVNVAGVSLQELNPEMGTD 61

Query: 239 ---EETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECAF 295
              E  + +   +     EV++ K     A   +  +     ++ L+ L     V     
Sbjct: 62  NDSENWKEVHKMVVESAYEVIKLKGYTNWA---IGLSVADLIESMLKNLSRIHPVSTMVK 118

Query: 296 VASQVTELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSIQKGI 349
               +    F +    L  +G   +     L + E   L+K+   L   IQK +
Sbjct: 119 GMYGIENEVFLSLPCILNARGLTSVINQ-KLKDDEVAQLKKSADTLWD-IQKDL 170

>d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]} Length = 146

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH
species: Lactobacillus confusus [TaxId: 1583]

 Score = 89.0 bits (220), Expect = 4e-22
 Identities = 27/148 (18%), Positives = 54/148 (36%), Gaps = 10/148 (6%)

Query: 44  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQ 103
           K+ I+G  G +G  +A  +    +       D          I   D  A +        
Sbjct: 3   KIGIIGL-GNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVI 61

Query: 104 LEN-ALTGMDLVIIPAGVPR----KPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLI 158
            +  AL   D+VI   G  +     P   R       + +V+++   + +   +  + +I
Sbjct: 62  NDWAALADADVVISTLGNIKLQQDNPTGDRFAELKFTSSMVQSVGTNLKESGFHGVLVVI 121

Query: 159 SNPVNSTVPIAAEVFKKAGTYDPKKLLG 186
           SNPV+    +   +F+    +   K++G
Sbjct: 122 SNPVD----VITALFQHVTGFPAHKVIG 145

>d1y6ja2 d.162.1.1 (A:149-317) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]} Length = 169

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: Lactate dehydrogenase
species: Clostridium thermocellum [TaxId: 1515]

 Score = 87.6 bits (216), Expect = 3e-21
 Identities = 23/171 (13%), Positives = 58/171 (33%), Gaps = 16/171 (9%)

Query: 188 TMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPCSFTQ--------- 238
           T+LD +R    ++E LG+D ++V   ++G H    +           +  +         
Sbjct: 1   TVLDSIRFRYLLSEKLGVDVKNVHGYIIGEHGDSQLPLWSCTHIAGKNINEYIDDPKCNF 60

Query: 239 --EETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECAFV 296
             E+ + +   ++  G  +++ K              V+        +R    V+   + 
Sbjct: 61  TEEDKKKIAEDVKTAGATIIKNKGATYYGIAVSINTIVETLLKNQNTIRTVGTVINGMYG 120

Query: 297 ASQVTELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSIQK 347
                     +    +  +G +E+ Q   L   E   L  + +++   + +
Sbjct: 121 IED----VAISLPSIVNSEGVQEVLQF-NLTPEEEEALRFSAEQVKKVLNE 166

>d1t2da2 d.162.1.1 (A:151-315) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 165

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: Lactate dehydrogenase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

 Score = 87.2 bits (215), Expect = 3e-21
 Identities = 36/162 (22%), Positives = 66/162 (40%), Gaps = 14/162 (8%)

Query: 189 MLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPL---------LSQVKPPCSFTQE 239
           +LD  R   ++++ L + PRDV+  +VG H    +L           L +       +  
Sbjct: 2   VLDTSRLKYYISQKLNVCPRDVNAHIVGAHGNKMVLLKRYITVGGIPLQEFINNKLISDA 61

Query: 240 ETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECAFVASQ 299
           E E + +R  N   E+V   A    A  +      +     L+ +   + ++E  +  S 
Sbjct: 62  ELEAIFDRTVNTALEIVNLHASPYVAPAAAIIEMAESYLKDLKKVLICSTLLEGQYGHSD 121

Query: 300 VTELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKEL 341
           +    F  + V LG  G E++ +L  LN  E+   ++A  E 
Sbjct: 122 I----FGGTPVVLGANGVEQVIEL-QLNSEEKAKFDEAIAET 158

>d7mdha2 d.162.1.1 (A:198-385) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]} Length = 188

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: Malate dehydrogenase
species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]

 Score = 83.5 bits (206), Expect = 9e-20
 Identities = 28/164 (17%), Positives = 53/164 (32%), Gaps = 12/164 (7%)

Query: 188 TMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPCSFTQEET------ 241
           T LD  RA   +A   G+    V    + G+   T +P     K      +E        
Sbjct: 1   TRLDENRAKCQLALKAGVFYDKVSNVTIWGNHSTTQVPDFLNAKIDGRPVKEVIKRTKWL 60

Query: 242 -EYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECAFVASQ- 299
            E  T  +Q  G  +++      S+  S A +      + +             +     
Sbjct: 61  EEEFTITVQKRGGALIQKW--GRSSAASTAVSIADAIKSLVTPTPEGDWFSTGVYTTGNP 118

Query: 300 --VTELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKEL 341
             + E   F+   R    G  E+      +++    ++K++ EL
Sbjct: 119 YGIAEDIVFSMPCRSKGDGDYELATDVSNDDFLWERIKKSEAEL 162

>d1y7ta2 d.162.1.1 (A:154-332) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]} Length = 173

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: Malate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

 Score = 82.1 bits (202), Expect = 3e-19
 Identities = 32/164 (19%), Positives = 54/164 (32%), Gaps = 7/164 (4%)

Query: 188 TMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVK----PPCSFTQEETEY 243
           T LD  RA   +A+  G     +    V G+   T+ P L   +    P       E   
Sbjct: 2   TRLDHNRAKAQLAKKTGTGVDRIRRMTVWGNHSSTMFPDLFHAEVDGRPALELVDMEWYE 61

Query: 244 LTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECAFVASQ--VT 301
                          +A   S+  S A AA++       G      V        +  + 
Sbjct: 62  KVFIPTVAQRGAAIIQARGASSAASAANAAIEHIRDWALGTPEGDWVSMAVPSQGEYGIP 121

Query: 302 ELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSI 345
           E   ++  V   + GA  + +   +NE+ R  +E   +EL   +
Sbjct: 122 EGIVYSFPV-TAKDGAYRVVEGLEINEFARKRMEITAQELLDEM 164

>d1pzga2 d.162.1.1 (A:164-334) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]} Length = 174

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: Lactate dehydrogenase
species: Toxoplasma gondii [TaxId: 5811]

 Score = 81.5 bits (200), Expect = 4e-19
 Identities = 38/171 (22%), Positives = 67/171 (39%), Gaps = 13/171 (7%)

Query: 189 MLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPCSFT---------QE 239
           MLD  R   +VA+ L + PRDV   V+G H    +  +                    ++
Sbjct: 3   MLDSGRFRRYVADALSVSPRDVQATVIGTHGDCMVPLVRYITVNGYPIQKFIKDGVVTEK 62

Query: 240 ETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECAFVASQ 299
           + E +    +  G E+V    G GSA  + A +AV  A + L   +              
Sbjct: 63  QLEEIAEHTKVSGGEIVRFL-GQGSAYYAPAASAVAMATSFLNDEKRVIPCSVYCNGEYG 121

Query: 300 VTELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSIQKGIS 350
           + +  F      +G  G E + +L  LNE E+   +K+  ++   + K ++
Sbjct: 122 LKD-MFIGLPAVIGGAGIERVIEL-ELNEEEKKQFQKSVDDVMA-LNKAVA 169

>d1up7a1 c.2.1.5 (A:1-162) 6-phospho-beta-glucosidase {Thermotoga maritima [TaxId: 2336]} Length = 162

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: 6-phospho-beta-glucosidase
species: Thermotoga maritima [TaxId: 2336]

 Score = 80.5 bits (198), Expect = 8e-19
 Identities = 23/167 (13%), Positives = 49/167 (29%), Gaps = 32/167 (19%)

Query: 44  KVAILGAAGGIGQPLAMLMKI----NPLVSVLHLYDVVNTP-GVTADISHMDTGAVVRGF 98
           ++A++G  G    P  +   +    +  +  +  YD+      +  D          +  
Sbjct: 2   RIAVIGG-GSSYTPELVKGLLDISEDVRIDEVIFYDIDEEKQKIVVDFVKRLVKDRFKVL 60

Query: 99  LGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIA----------- 147
           +     E A+     VI         G   D+   +  G++     G+            
Sbjct: 61  ISD-TFEGAVVDAKYVIFQFRPGGLKGRENDEGIPLKYGLIGQETTGVGGFSAALRAFPI 119

Query: 148 --------KCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLG 186
                   +   NAT+   +NP         E  +     + +K +G
Sbjct: 120 VEEYVDTVRKTSNATIVNFTNPSG----HITEFVRNY--LEYEKFIG 160

>d1b8pa2 d.162.1.1 (A:159-329) Malate dehydrogenase {Aquaspirillum arcticum [TaxId: 87645]} Length = 171

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: Malate dehydrogenase
species: Aquaspirillum arcticum [TaxId: 87645]

 Score = 79.9 bits (196), Expect = 2e-18
 Identities = 23/158 (14%), Positives = 44/158 (27%), Gaps = 7/158 (4%)

Query: 190 LDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPCS-----FTQEETEYL 244
           LD  RA + +A   G     ++   V G+   T+       +   +        +     
Sbjct: 3   LDHNRALSQIAAKTGKPVSSIEKLFVWGNHSPTMYADYRYAQIDGASVKDMINDDAWNRD 62

Query: 245 TNRIQNGGTEVVEAKAGAGSATLSM-AYAAVKFADACLRGLRGDAGVVECAFVASQVTEL 303
           T     G        A   S+  S    A     D  L        +   +  +  + E 
Sbjct: 63  TFLPTVGKRGAAIIDARGVSSAASAANAAIDHIHDWVLGTAGKWTTMGIPSDGSYGIPEG 122

Query: 304 PFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKEL 341
             F   V       + +  L  ++ + +  +     EL
Sbjct: 123 VIFGFPVTTENGEYKIVQGL-SIDAFSQERINVTLNEL 159

>d1s6ya1 c.2.1.5 (A:4-172) 6-phospho-beta-glucosidase {Bacillus stearothermophilus [TaxId: 1422]} Length = 169

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: 6-phospho-beta-glucosidase
species: Bacillus stearothermophilus [TaxId: 1422]

 Score = 73.9 bits (181), Expect = 2e-16
 Identities = 26/161 (16%), Positives = 42/161 (26%), Gaps = 30/161 (18%)

Query: 44  KVAILGAAGGIGQPLAMLMKINPL----VSVLHLYDVVNTP--GVTADISH---MDTGAV 94
           K+A +G  G    P  +   I       V  L L D+                 ++   V
Sbjct: 3   KIATIGG-GSSYTPELVEGLIKRYHELPVGELWLVDIPEGKEKLEIVGALAKRMVEKAGV 61

Query: 95  VRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGI-------- 146
                       AL G D V     V       +D+   +  G++     G         
Sbjct: 62  PIEIHLTLDRRRALDGADFVTTQFRVGGLEARAKDERIPLKYGVIGQETNGPGGLFKGLR 121

Query: 147 ------------AKCCPNATVNLISNPVNSTVPIAAEVFKK 175
                        + CP+A +   +NP            K+
Sbjct: 122 TIPVILDIIRDMEELCPDAWLINFTNPAGMVTEAVLRYTKQ 162

>d1u8xx1 c.2.1.5 (X:3-169) Maltose-6'-phosphate glucosidase GlvA {Bacillus subtilis [TaxId: 1423]} Length = 167

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Maltose-6'-phosphate glucosidase GlvA
species: Bacillus subtilis [TaxId: 1423]

 Score = 73.5 bits (180), Expect = 2e-16
 Identities = 28/162 (17%), Positives = 46/162 (28%), Gaps = 30/162 (18%)

Query: 43  FKVAILGAAGGIGQP---LAMLMKINPL-VSVLHLYDV----VNTPGVTADISHMDTGAV 94
           F + I G  G    P   L +L  +    +  L LYD      +      D+   +    
Sbjct: 4   FSIVIAGG-GSTFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIAGACDVFIREKAPD 62

Query: 95  VRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIA------- 147
           +         E A T +D V+    V +      D+   +  G+V     G         
Sbjct: 63  IEFA-ATTDPEEAFTDVDFVMAHIRVGKYAMRALDEQIPLKYGVVGQETCGPGGIAYGMR 121

Query: 148 -------------KCCPNATVNLISNPVNSTVPIAAEVFKKA 176
                        K  P+A +   SNP          +   +
Sbjct: 122 SIGGVLEILDYMEKYSPDAWMLNYSNPAAIVAEATRRLRPNS 163

>d1obba1 c.2.1.5 (A:2-172) Alpha-glucosidase AglA {Thermotoga maritima [TaxId: 2336]} Length = 171

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Alpha-glucosidase AglA
species: Thermotoga maritima [TaxId: 2336]

 Score = 67.5 bits (164), Expect = 3e-14
 Identities = 25/166 (15%), Positives = 41/166 (24%), Gaps = 34/166 (20%)

Query: 42  GFKVAILGAAGGIGQPLAM---LMKINPL-VSVLHLYDVV--NTPGVTADISHM-DTGAV 94
             K+ I+GA G     L +   L K   L  S + L D+       +        +    
Sbjct: 2   SVKIGIIGA-GSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDAILTIAKKYVEEVGA 60

Query: 95  VRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNI-------------------- 134
              F     L++ +   D VI  A V     + +                          
Sbjct: 61  DLKFEKTMNLDDVIIDADFVINTAMVGGHTYLEKVRQIGEKYGYYRGIDAQEFNMVSDYY 120

Query: 135 ------NAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFK 174
                        +   I K  P A     +NP+     +      
Sbjct: 121 TFSNYNQLKYFVDIARKIEKLSPKAWYLQAANPIFEGTTLVTRTVP 166

>d1ojua2 d.162.1.1 (A:164-331) Lactate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Length = 152

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: Lactate dehydrogenase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

 Score = 63.1 bits (153), Expect = 9e-13
 Identities = 27/160 (16%), Positives = 52/160 (32%), Gaps = 12/160 (7%)

Query: 188 TMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPCSFTQEETEYLTNR 247
             LD  R    +      + R     ++G H G ++    S          E  E   N 
Sbjct: 2   NQLDSQRLKERLYNAGARNIRRA--WIIGEH-GDSMFVAKSLADFDGEVDWEAVE---ND 55

Query: 248 IQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECAFVASQVTELPFFA 307
           ++    EV++     G+     A A  +   A +                  +  +    
Sbjct: 56  VRFVAAEVIK---RKGATIFGPAVAIYRMVKAVVEDTGEIIPTSMILQGEYGIENV-AVG 111

Query: 308 SKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSIQK 347
              +LG+ GAE +  +  L++ E   L  + K L   +++
Sbjct: 112 VPAKLGKNGAE-VADI-KLSDEEIEKLRNSAKILRERLEE 149

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	354
d1mlda1	144	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	100.0
d2cmda1	145	Malate dehydrogenase {Escherichia coli [TaxId: 562	100.0
d1llda1	143	Lactate dehydrogenase {Bifidobacterium longum, str	100.0
d1ojua1	142	Malate dehydrogenase {Archaeon Archaeoglobus fulgi	99.97
d1ldna1	148	Lactate dehydrogenase {Bacillus stearothermophilus	99.97
d1y6ja1	142	Lactate dehydrogenase {Clostridium thermocellum [T	99.97
d1a5za1	140	Lactate dehydrogenase {Thermotoga maritima [TaxId:	99.97
d1o6za1	142	Malate dehydrogenase {Archaeon Haloarcula marismor	99.97
d1i0za1	160	Lactate dehydrogenase {Human (Homo sapiens), heart	99.97
d1guza1	142	Malate dehydrogenase {Chlorobium vibrioforme [TaxI	99.97
d1hyha1	146	L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La	99.97
d1mlda2	169	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	99.97
d1hyea1	145	MJ0490, lactate/malate dehydrogenase {Archaeon Met	99.97
d1ojua2	152	Lactate dehydrogenase {Archaeon Archaeoglobus fulg	99.97
d1ez4a1	146	Lactate dehydrogenase {Lactobacillus pentosus [Tax	99.97
d1guza2	163	Malate dehydrogenase {Chlorobium vibrioforme [TaxI	99.97
d1uxja2	164	Malate dehydrogenase {Chloroflexus aurantiacus [Ta	99.97
d1ez4a2	171	Lactate dehydrogenase {Lactobacillus pentosus [Tax	99.97
d2cmda2	167	Malate dehydrogenase {Escherichia coli [TaxId: 562	99.97
d2ldxa1	159	Lactate dehydrogenase {Mouse (Mus musculus) [TaxId	99.97
d1llda2	170	Lactate dehydrogenase {Bifidobacterium longum, str	99.96
d1t2da1	150	Lactate dehydrogenase {Malaria parasite (Plasmodiu	99.96
d7mdha2	188	Malate dehydrogenase {Sorghum (Sorghum vulgare), c	99.96
d1pzga1	154	Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5	99.96
d1pzga2	174	Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5	99.96
d5mdha2	179	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	99.96
d1y6ja2	169	Lactate dehydrogenase {Clostridium thermocellum [T	99.96
d1a5za2	172	Lactate dehydrogenase {Thermotoga maritima [TaxId:	99.96
d1t2da2	165	Lactate dehydrogenase {Malaria parasite (Plasmodiu	99.96
d1uxja1	142	Malate dehydrogenase {Chloroflexus aurantiacus [Ta	99.96
d7mdha1	175	Malate dehydrogenase {Sorghum (Sorghum vulgare), c	99.96
d1o6za2	161	Malate dehydrogenase {Archaeon Haloarcula marismor	99.95
d5mdha1	154	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	99.95
d1hyea2	168	MJ0490, lactate/malate dehydrogenase {Archaeon Met	99.95
d1ldna2	168	Lactate dehydrogenase {Bacillus stearothermophilus	99.95
d1hyha2	163	L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La	99.95
d1i0za2	172	Lactate dehydrogenase {Human (Homo sapiens), heart	99.95
d1y7ta1	154	Malate dehydrogenase {Thermus thermophilus [TaxId:	99.95
d1ldma2	169	Lactate dehydrogenase {Dogfish (Squalus acanthias)	99.95
d1llca2	172	Lactate dehydrogenase {Lactobacillus casei [TaxId:	99.95
d2ldxa2	172	Lactate dehydrogenase {Mouse (Mus musculus) [TaxId	99.94
d1y7ta2	173	Malate dehydrogenase {Thermus thermophilus [TaxId:	99.94
d1b8pa2	171	Malate dehydrogenase {Aquaspirillum arcticum [TaxI	99.93
d1s6ya1	169	6-phospho-beta-glucosidase {Bacillus stearothermop	99.92
d1u8xx1	167	Maltose-6'-phosphate glucosidase GlvA {Bacillus su	99.9
d1up7a1	162	6-phospho-beta-glucosidase {Thermotoga maritima [T	99.89
d1obba1	171	Alpha-glucosidase AglA {Thermotoga maritima [TaxId	99.88
d1vjta1	193	Putative alpha-glucosidase TM0752 {Thermotoga mari	99.49
d1f0ya2	192	Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum	98.84
d1wdka3	186	Fatty oxidation complex alpha subunit, middle doma	98.68
d1mv8a2	202	GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos	98.64
d1udca_	338	Uridine diphosphogalactose-4-epimerase (UDP-galact	98.6
d2b69a1	312	UDP-glucuronate decarboxylase 1 {Human (Homo sapie	98.56
d2c5aa1	363	GDP-mannose-3', 5'-epimerase {Thale cress (Arabido	98.56
d1orra_	338	CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId:	98.45
d1bg6a2	184	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A	98.45
d1hdoa_	205	Biliverdin IX beta reductase {Human (Homo sapiens)	98.44
d1db3a_	357	GDP-mannose 4,6-dehydratase {Escherichia coli [Tax	98.43
d1r6da_	322	dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces	98.42
d2f1ka2	165	Prephenate dehydrogenase TyrA {Synechocystis sp. p	98.4
d1txga2	180	Glycerol-3- phosphate dehydrogenase {Archaeoglobus	98.39
d2bkaa1	232	TAT-interacting protein TIP30 {Human (Homo sapiens	98.32
d1ks9a2	167	Ketopantoate reductase PanE {Escherichia coli [Tax	98.27
d2blla1	342	Polymyxin resistance protein ArnA (PrmI) {Escheric	98.22
d1oc2a_	346	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	98.21
d1i24a_	393	Sulfolipid biosynthesis protein SQD1 {Thale cress	98.2
d1n1ea2	189	Glycerol-3- phosphate dehydrogenase {Trypanosome (	98.2
d1kewa_	361	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	98.2
d1sb8a_	341	UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo	98.19
d1z45a2	347	Uridine diphosphogalactose-4-epimerase (UDP-galact	98.14
d1y1pa1	342	Aldehyde reductase II {Sporobolomyces salmonicolor	98.07
d1e6ua_	315	GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (	98.05
d1gy8a_	383	Uridine diphosphogalactose-4-epimerase (UDP-galact	98.04
d1rkxa_	356	CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc	97.99
d1vpda2	161	Hydroxyisobutyrate dehydrogenase {Salmonella typhi	97.96
d1rpna_	321	GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos	97.91
d2g5ca2	171	Prephenate dehydrogenase TyrA {Aquifex aeolicus [T	97.87
d2a35a1	212	Hypothetical protein PA4017 {Pseudomonas aeruginos	97.86
d1t2aa_	347	GDP-mannose 4,6-dehydratase {Human (Homo sapiens)	97.76
d3cuma2	162	Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru	97.75
d2ahra2	152	Pyrroline-5-carboxylate reductase ProC {Streptococ	97.73
d1ek6a_	346	Uridine diphosphogalactose-4-epimerase (UDP-galact	97.73
d1dlja2	196	UDP-glucose dehydrogenase (UDPGDH) {Streptococcus	97.73
d2q46a1	252	Hypothetical protein At5g02240 (T7H20_290) {Thale	97.69
d1xg5a_	257	Putative dehydrogenase ARPG836 (MGC4172) {Human (H	97.66
d1s6ya2	270	6-phospho-beta-glucosidase {Bacillus stearothermop	97.63
d1n2sa_	298	dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S	97.59
d1vl0a_	281	DTDP-4-dehydrorhamnose reductase RfbD {Clostridium	97.57
d1up7a2	253	6-phospho-beta-glucosidase {Thermotoga maritima [T	97.57
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	97.54
d1luaa1	191	Methylene-tetrahydromethanopterin dehydrogenase {M	97.53
d1i36a2	152	Conserved hypothetical protein MTH1747 {Archaeon M	97.5
d1pgja2	178	6-phosphogluconate dehydrogenase {Trypanosoma bruc	97.5
d1mb4a1	147	Aspartate beta-semialdehyde dehydrogenase {Vibrio	97.46
d1t4ba1	146	Aspartate beta-semialdehyde dehydrogenase {Escheri	97.44
d2pgda2	176	6-phosphogluconate dehydrogenase {Sheep (Ovis orie	97.44
d1zk4a1	251	R-specific alcohol dehydrogenase {Lactobacillus br	97.41
d1gega_	255	meso-2,3-butanediol dehydrogenase {Klebsiella pneu	97.4
d1qyda_	312	Pinoresinol-lariciresinol reductase {Giant arborvi	97.39
d1u8xx2	276	Maltose-6'-phosphate glucosidase GlvA {Bacillus su	97.38
d1pr9a_	244	Carbonyl reductase {Human (Homo sapiens) [TaxId: 9	97.35
d1yqga2	152	Pyrroline-5-carboxylate reductase ProC {Neisseria	97.32
d2hmva1	134	Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}	97.3
d1xgka_	350	Negative transcriptional regulator NmrA {Aspergill	97.29
d1qyca_	307	Phenylcoumaran benzylic ether reductase {Loblolly	97.25
d1cyda_	242	Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1	97.23
d1eq2a_	307	ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric	97.21
d1n7ha_	339	GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop	97.2
d1pjca1	168	L-alanine dehydrogenase {Phormidium lapideum [TaxI	97.12
d1geea_	261	Glucose dehydrogenase {Bacillus megaterium [TaxId:	97.09
d1vl8a_	251	Gluconate 5-dehydrogenase {Thermotoga maritima [Ta	97.06
d2pv7a2	152	Prephenate dehydrogenase TyrA {Haemophilus influen	97.06
d1k2wa_	256	Sorbitol dehydrogenase {Rhodobacter sphaeroides [T	97.05
d1jaya_	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae	97.01
d1obba2	308	Alpha-glucosidase AglA {Thermotoga maritima [TaxId	96.91
d1iy8a_	258	Levodione reductase {Corynebacterium aquaticum [Ta	96.9
d1x1ta1	260	D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas	96.9
d1l7da1	183	Nicotinamide nucleotide transhydrogenase dI compon	96.88
d1e5qa1	182	Saccharopine reductase {Rice blast fungus (Magnapo	96.88
d2bgka1	268	Rhizome secoisolariciresinol dehydrogenase {Mayapp	96.87
d1nffa_	244	Putative oxidoreductase Rv2002 {Mycobacterium tube	96.86
d1vjta2	278	Putative alpha-glucosidase TM0752 {Thermotoga mari	96.85
d2gdza1	254	15-hydroxyprostaglandin dehydrogenase, PGDH {Human	96.83
d1o5ia_	234	beta-keto acyl carrier protein reductase {Thermoto	96.81
d1zema1	260	Xylitol dehydrogenase {Gluconobacter oxydans [TaxI	96.78
d1xkqa_	272	Hypothetical protein R05D8.7 {Caenorhabditis elega	96.78
d2rhca1	257	beta-keto acyl carrier protein reductase {Streptom	96.78
d1yb1a_	244	17-beta-hydroxysteroid dehydrogenase type XI {Huma	96.73
d1h5qa_	260	Mannitol dehydrogenase {Mushroom (Agaricus bisporu	96.69
d2ae2a_	259	Tropinone reductase {Jimsonweed (Datura stramonium	96.68
d2ew8a1	247	(s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb	96.68
d1pjqa1	113	Siroheme synthase CysG, domain 1 {Salmonella typhi	96.68
d1ooea_	235	Dihydropteridin reductase (pteridine reductase) {N	96.66
d1dhra_	236	Dihydropteridin reductase (pteridine reductase) {R	96.65
d1fmca_	255	7-alpha-hydroxysteroid dehydrogenase {Escherichia	96.63
d2jfga1	93	UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase	96.63
d2c07a1	251	beta-keto acyl carrier protein reductase {Malaria	96.62
d2ag5a1	245	Dehydrogenase/reductase SDR family member 6, DHRS6	96.61
d1xhla_	274	Hypothetical protein F25D1.5 {Caenorhabditis elega	96.6
d2d1ya1	248	Hypothetical protein TTHA0369 {Thermus thermophilu	96.59
d1xu9a_	269	11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom	96.58
d1sbya1	254	Drosophila alcohol dehydrogenase {Fly (Drosophila	96.58
d1ae1a_	258	Tropinone reductase {Jimsonweed (Datura stramonium	96.56
d1gpja2	159	Glutamyl tRNA-reductase middle domain {Archaeon Me	96.56
d2pd4a1	274	Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2	96.54
d1mx3a1	193	Transcription corepressor CtbP {Human (Homo sapien	96.43
d2naca1	188	Formate dehydrogenase {Pseudomonas sp., strain 101	96.41
d1hxha_	253	3beta/17beta hydroxysteroid dehydrogenase {Comamon	96.4
d1ydea1	250	Retinal dehydrogenase/reductase 3 {Human (Homo sap	96.35
d2hjsa1	144	Usg-1 protein homolog PA3116 {Pseudomonas aerugino	96.34
d1w6ua_	294	2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H	96.34
d1qsga_	258	Enoyl-ACP reductase {Escherichia coli [TaxId: 562]	96.34
d1q7ba_	243	beta-keto acyl carrier protein reductase {Escheric	96.33
d1g0oa_	272	1,3,8-trihydroxynaphtalene reductase (THNR, naphto	96.31
d1hdca_	254	3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre	96.3
d1spxa_	264	Glucose dehydrogenase (5l265) {Nematode (Caenorhab	96.29
d1ulsa_	242	beta-keto acyl carrier protein reductase {Thermus	96.28
d1vkna1	176	N-acetyl-gamma-glutamyl-phosphate reductase ArgC {	96.27
d1xq1a_	259	Tropinone reductase {Thale cress (Arabidopsis thal	96.25
d1gdha1	191	D-glycerate dehydrogenase {Hyphomicrobium methylov	96.21
d2bd0a1	240	Bacterial sepiapterin reductase {Chlorobium tepidu	96.18
d2iida1	370	L-aminoacid oxidase {Malayan pit viper (Calloselas	96.18
d1uzma1	237	beta-keto acyl carrier protein reductase {Mycobact	96.15
d1ygya1	184	Phosphoglycerate dehydrogenase {Mycobacterium tube	96.15
d1yxma1	297	Peroxisomal trans 2-enoyl CoA reductase {Human (Ho	96.14
d2cvoa1	183	Putative semialdehyde dehydrogenase {Rice (Oryza s	96.09
d2a4ka1	241	beta-keto acyl carrier protein reductase {Thermus	96.04
d1gz6a_	302	(3R)-hydroxyacyl-CoA dehydrogenase domain of estra	96.04
d1id1a_	153	Rck domain from putative potassium channel Kch {Es	95.99
d2g17a1	179	N-acetyl-gamma-glutamyl-phosphate reductase ArgC {	95.89
d1zmta1	252	Halohydrin dehalogenase HheC {Agrobacterium tumefa	95.87
d1qp8a1	181	Putative formate dehydrogenase {Archaeon Pyrobacul	95.87
d1j4aa1	197	D-lactate dehydrogenase {Lactobacillus helveticus	95.85
d1c0pa1	268	D-aminoacid oxidase, N-terminal domain {Rhodotorul	95.75
d1diha1	162	Dihydrodipicolinate reductase {Escherichia coli [T	95.73
d1bdba_	276	Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps	95.68
d1ulua_	256	Enoyl-ACP reductase {Thermus thermophilus [TaxId:	95.67
d1x7da_	340	Ornithine cyclodeaminase {Pseudomonas putida [TaxI	95.66
d1xeaa1	167	Putative oxidoreductase VCA1048 {Vibrio cholerae [	95.64
d1ja9a_	259	1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl	95.63
d2cvza2	156	Hydroxyisobutyrate dehydrogenase {Thermus thermoph	95.62
d1wmaa1	275	Carbonyl reductase/20beta-hydroxysteroid dehydroge	95.51
d1edoa_	244	beta-keto acyl carrier protein reductase {Oil seed	95.5
d1dxya1	199	D-2-hydroxyisocaproate dehydrogenase {Lactobacillu	95.39
d1oaaa_	259	Sepiapterin reductase {Mouse (Mus musculus) [TaxId	95.33
d2h7ma1	268	Enoyl-ACP reductase {Mycobacterium tuberculosis, T	95.3
d2ivda1	347	Protoporphyrinogen oxidase {Myxococcus xanthus [Ta	95.3
d1pl8a2	171	Ketose reductase (sorbitol dehydrogenase) {Human (	95.25
d2voua1	265	Dihydroxypyridine hydroxylase DhpH {Arthrobacter n	95.24
d1uufa2	168	Hypothetical protein YahK {Escherichia coli [TaxId	95.19
d1w5fa1	194	Cell-division protein FtsZ {Thermotoga maritima [T	95.12
d1nhpa1	198	NADH peroxidase {Enterococcus faecalis [TaxId: 135	95.1
d1tlta1	164	Virulence factor MviM {Escherichia coli [TaxId: 56	95.1
d1pj3a1	294	Mitochondrial NAD(P)-dependent malic enzyme {Human	95.1
d2i76a2	153	Hypothetical protein TM1727 {Thermotoga maritima [	95.05
d1p3da1	96	UDP-N-acetylmuramate-alanine ligase MurC {Haemophi	95.03
d1j6ua1	89	UDP-N-acetylmuramate-alanine ligase MurC {Thermoto	95.01
d1seza1	373	Protoporphyrinogen oxidase {Tobacco (Nicotiana tab	94.93
d1sc6a1	188	Phosphoglycerate dehydrogenase {Escherichia coli [	94.92
d1gtea4	196	Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su	94.89
d1fcda1	186	Flavocytochrome c sulfide dehydrogenase, FCSD, fla	94.83
d1e3ja2	170	Ketose reductase (sorbitol dehydrogenase) {Silverl	94.82
d2o23a1	248	Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho	94.78
d2bi7a1	314	UDP-galactopyranose mutase, N-terminal domain {Kle	94.77
d1f06a1	170	Diaminopimelic acid dehydrogenase (DAPDH) {Coryneb	94.75
d1vi2a1	182	Putative shikimate dehydrogenase YdiB {Escherichia	94.73
d3c96a1	288	Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId:	94.73
d1ps9a3	179	2,4-dienoyl-CoA reductase, middle domain {Escheric	94.69
d1ydwa1	184	Probable oxidoreductase At4g09670 {Thale cress (Ar	94.61
d1zh8a1	181	Hypothetical protein TM0312 {Thermotoga maritima [	94.59
d1li4a1	163	S-adenosylhomocystein hydrolase {Human (Homo sapie	94.55
d2fr1a1	259	Erythromycin synthase, eryAI, 1st ketoreductase mo	94.55
d1mxha_	266	Dihydropteridin reductase (pteridine reductase) {T	94.53
d1nyta1	170	Shikimate 5-dehydrogenase AroE {Escherichia coli [	94.42
d1ebda2	117	Dihydrolipoamide dehydrogenase {Bacillus stearothe	94.38
d1nhpa2	123	NADH peroxidase {Enterococcus faecalis [TaxId: 135	94.34
d1vl6a1	222	Malate oxidoreductase (malic enzyme) {Thermotoga m	94.27
d1d7ya2	121	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	94.26
d1gesa2	116	Glutathione reductase {Escherichia coli [TaxId: 56	94.18
d1onfa2	117	Glutathione reductase {Plasmodium falciparum [TaxI	94.14
d2gv8a1	335	Flavin-dependent monoxygenase SPBP16F5.08c {Schizo	94.12
d1ryia1	276	Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}	94.1
d1kyqa1	150	Bifunctional dehydrogenase/ferrochelatase Met8p, N	94.07
d2dw4a2	449	Lysine-specific histone demethylase 1, LSD1 {Human	94.03
d2vapa1	209	Cell-division protein FtsZ {Archaeon Methanococcus	94.01
d1e7wa_	284	Dihydropteridin reductase (pteridine reductase) {L	93.91
d1omoa_	320	Archaeal alanine dehydrogenase {Archaeon Archaeogl	93.86
d1v59a2	122	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	93.86
d1h6da1	221	Glucose-fructose oxidoreductase, N-terminal domain	93.8
d1q1ra2	133	Putidaredoxin reductase {Pseudomonas putida [TaxId	93.69
d1jtva_	285	Human estrogenic 17beta-hydroxysteroid dehydrogena	93.67
d1edza1	171	Methylenetetrahydrofolate dehydrogenase/cyclohydro	93.54
d1a4ia1	170	Methylenetetrahydrofolate dehydrogenase/cyclohydro	93.54
d1o0sa1	308	Mitochondrial NAD(P)-dependent malic enzyme {Pig r	93.38
d1vj0a2	182	Hypothetical protein TM0436 {Thermotoga maritima [	93.36
d1b5qa1	347	Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}	93.32
d1gq2a1	298	Mitochondrial NAD(P)-dependent malic enzyme {Domes	93.3
d1lvla2	115	Dihydrolipoamide dehydrogenase {Pseudomonas putida	93.27
d1b0aa1	166	Methylenetetrahydrofolate dehydrogenase/cyclohydro	93.26
d1cjca2	230	Adrenodoxin reductase of mitochondrial p450 system	93.2
d1nvta1	177	Shikimate 5-dehydrogenase AroE {Archaeon Methanoco	93.19
d1p77a1	171	Shikimate 5-dehydrogenase AroE {Haemophilus influe	93.17
d1snya_	248	Carbonyl reductase sniffer {Fruit fly (Drosophila	93.15
d1lqta2	239	Ferredoxin:NADP reductase FprA {Mycobacterium tube	93.1
d1jw9b_	247	Molybdenum cofactor biosynthesis protein MoeB {Esc	93.07
d1f8fa2	174	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	93.02
d1yo6a1	250	Putative carbonyl reductase sniffer {Caenorhabditi	93.0
d1kifa1	246	D-aminoacid oxidase, N-terminal domain {Pig (Sus s	92.99
d1v8ba1	163	S-adenosylhomocystein hydrolase {Plasmodium falcip	92.88
d1djqa3	233	Trimethylamine dehydrogenase, middle domain {Methy	92.82
d1fjha_	257	3-alpha-hydroxysteroid dehydrogenase {Comamonas te	92.81
d1jqba2	174	Bacterial secondary alcohol dehydrogenase {Clostri	92.65
d1k0ia1	292	p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas a	92.63
d3grsa2	125	Glutathione reductase {Human (Homo sapiens) [TaxId	92.53
d1h6va2	122	Mammalian thioredoxin reductase {Rat (Rattus norve	92.51
d3lada2	119	Dihydrolipoamide dehydrogenase {Azotobacter vinela	92.42
d1xhca2	122	NADH oxidase /nitrite reductase {Pyrococcus furios	92.35
d1mo9a2	121	NADH-dependent 2-ketopropyl coenzyme M oxidoreduct	92.3
d1rq2a1	198	Cell-division protein FtsZ {Mycobacterium tubercul	92.23
d1piwa2	168	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	92.22
d1pvva2	163	Ornithine transcarbamoylase {Archaeon Pyrococcus f	92.08
d1kjqa2	111	Glycinamide ribonucleotide transformylase PurT, N-	91.98
d1pj5a2	305	N,N-dimethylglycine oxidase {Arthrobacter globifor	91.93
d1vm6a3	128	Dihydrodipicolinate reductase {Thermotoga maritima	91.8
d2gz1a1	154	Aspartate beta-semialdehyde dehydrogenase {Strepto	91.74
d1dxha2	185	Ornithine transcarbamoylase {Pseudomonas aeruginos	91.69
d2bcgg1	297	Guanine nucleotide dissociation inhibitor, GDI {Ba	91.67
d1rjwa2	168	Alcohol dehydrogenase {Bacillus stearothermophilus	91.67
d2gf3a1	281	Sarcosine oxidase {Bacillus sp., strain b0618 [Tax	91.4
d1vlva2	161	Ornithine transcarbamoylase {Thermotoga maritima [	91.34
d3etja2	78	N5-carboxyaminoimidazole ribonucleotide synthetase	91.33
d1ofua1	198	Cell-division protein FtsZ {Pseudomonas aeruginosa	91.26
d1w4xa1	298	Phenylacetone monooxygenase {Thermobifida fusca [T	91.25
d1d5ta1	336	Guanine nucleotide dissociation inhibitor, GDI {Co	91.15
d1e3ia2	174	Alcohol dehydrogenase {Mouse (Mus musculus), class	91.13
d1d7oa_	297	Enoyl-ACP reductase {Oil seed rape (Brassica napus	90.98
d1pg5a2	153	Aspartate carbamoyltransferase catalytic subunit {	90.9
d2czca2	172	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	90.68
d1i8ta1	298	UDP-galactopyranose mutase, N-terminal domain {Esc	90.65
d1p0fa2	174	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	90.64
d1b7go1	178	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	90.51
d1ojta2	125	Dihydrolipoamide dehydrogenase {Neisseria meningit	90.47
d1dxla2	123	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	90.38
d1xa0a2	176	B. subtilis YhfP homologue {Bacillus stearothermop	90.13
d1uaya_	241	Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t	90.12
d2at2a2	151	Aspartate carbamoyltransferase catalytic subunit {	90.1
d1kola2	195	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	90.07
d1yovb1	426	UBA3 {Human (Homo sapiens) [TaxId: 9606]}	89.74
d2dt5a2	126	Transcriptional repressor Rex, C-terminal domain {	89.72
d1iz0a2	171	Quinone oxidoreductase {Thermus thermophilus [TaxI	89.21
d1duvg2	183	Ornithine transcarbamoylase {Escherichia coli [Tax	88.97
d2fy8a1	129	Potassium channel-related protein MthK {Archaeon M	88.97
d2i0za1	251	Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]	88.95
d2v5za1	383	Monoamine oxidase B {Human (Homo sapiens) [TaxId:	88.9
d1d1ta2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	88.57
d1pqwa_	183	Putative enoyl reductase domain of polyketide synt	88.24
d1yova1	529	Amyloid beta precursor protein-binding protein 1,	87.7
d1feca2	117	Trypanothione reductase {Crithidia fasciculata [Ta	87.64
d1xhca1	167	NADH oxidase /nitrite reductase {Pyrococcus furios	87.52
d1npya1	167	Shikimate 5-dehydrogenase-like protein HI0607 {Hae	87.51
d2d59a1	139	Hypothetical protein PH1109 {Pyrococcus horikoshii	87.39
d1qora2	179	Quinone oxidoreductase {Escherichia coli [TaxId: 5	87.35
d1q1ra1	185	Putidaredoxin reductase {Pseudomonas putida [TaxId	87.23
d1gtea3	153	Dihydropyrimidine dehydrogenase, domain 3 {Pig (Su	86.86
d2gqfa1	253	Hypothetical protein HI0933 {Haemophilus influenza	86.42
d1trba1	190	Thioredoxin reductase {Escherichia coli [TaxId: 56	86.2
d1aoga2	117	Trypanothione reductase {Trypanosoma cruzi [TaxId:	86.08
d2jhfa2	176	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	85.99
d1pn0a1	360	Phenol hydroxylase {Soil-living yeast (Trichosporo	85.89
d2h1qa1	251	Hypothetical protein Dhaf_3308 {Desulfitobacterium	85.75
d1vdca1	192	Thioredoxin reductase {Mouse-ear cress (Arabidopsi	85.74
d1cf2o1	171	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	85.66
d1yl7a1	135	Dihydrodipicolinate reductase {Mycobacterium tuber	85.47
d1gesa1	217	Glutathione reductase {Escherichia coli [TaxId: 56	85.36
d2nvwa1	237	Galactose/lactose metabolism regulatory protein GA	85.31
d1rp0a1	278	Thiazole biosynthetic enzyme Thi4 {Thale cress(Ara	84.87
d1jvba2	170	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	84.85
d1llua2	166	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	84.66
d1v59a1	233	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	84.28
d1r0ka2	150	1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z	84.01
d1nvmb1	157	Acetaldehyde dehydrogenase (acylating) {Pseudomona	83.99
d1c1da1	201	Phenylalanine dehydrogenase {Rhodococcus sp., M4 [	83.72
d2fzwa2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	83.67
d1y0pa2	308	Flavocytochrome c3 (respiratory fumarate reductase	82.92
d1v3va2	182	Leukotriene b4 12-hydroxydehydrogenase/prostagland	82.82
d1fl2a1	184	Alkyl hydroperoxide reductase subunit F (AhpF), C-	82.77
d1dxla1	221	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	82.15
d1m6ia1	213	Apoptosis-inducing factor (AIF) {Human (Homo sapie	81.76
d1d7ya1	183	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	81.64
d1m6ia2	137	Apoptosis-inducing factor (AIF) {Human (Homo sapie	81.59
d1h2ba2	172	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	81.0
d2gmha1	380	Electron transfer flavoprotein-ubiquinone oxidored	80.65
d2csua1	129	Acetate-CoA ligase alpha chain, AcdA, N-terminal d	80.61
d1ojta1	229	Dihydrolipoamide dehydrogenase {Neisseria meningit	80.09

>d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=100.00  E-value=6.3e-34  Score=239.30  Aligned_cols=143  Identities=64%  Similarity=1.084  Sum_probs=133.3

Q ss_pred             eEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcCCCCCC
Q 018512           44 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVPRK  123 (354)
Q Consensus        44 kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~ag~~~~  123 (354)
                      ||+||||+|+||+++|+.|+.+++.+||+|+|+++.+++++|++|.........+..+++++++++|||+||+++|.|++
T Consensus         2 Kv~IiGA~G~VG~~~A~~l~~~~~~~elvLiDi~~~~~~a~Dl~~~~~~~~~~~~~~~~~~~~~~~~aDivVitag~~~~   81 (144)
T d1mlda1           2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVAADLSHIETRATVKGYLGPEQLPDCLKGCDVVVIPAGVPRK   81 (144)
T ss_dssp             EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHHHHHHTTSSSSCEEEEEESGGGHHHHHTTCSEEEECCSCCCC
T ss_pred             eEEEECCCChHHHHHHHHHHhCCccceEEEEeccccchhhHHHhhhhhhcCCCeEEcCCChHHHhCCCCEEEECCCcCCC
Confidence            89999977999999999999999999999999988899999999987655555544566778999999999999999999


Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCCchHHHHHHHHHhCCCCCCCEEE
Q 018512          124 PGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLG  186 (354)
Q Consensus       124 ~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~~~~~~~~~~p~~kviG  186 (354)
                      +|++|.|++..|+++++++++++.+++|+++++++|||+|.+++++++++++.++||++||||
T Consensus        82 ~g~sR~~ll~~N~~i~~~i~~~i~~~~p~~iiivvtNPvD~~t~~~~~~~kk~~~~p~~rViG  144 (144)
T d1mlda1          82 PGMTRDDLFNTNATIVATLTAACAQHCPDAMICIISNPVNSTIPITAEVFKKHGVYNPNKIFG  144 (144)
T ss_dssp             TTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECSSCHHHHHHHHHHHHHHTTCCCTTSEEE
T ss_pred             CCCCcchHHHHHHHHHHHHHHHHHhcCCCeEEEEecCchhhhHHHHHHHHHHhcCCCcccccC
Confidence            999999999999999999999999999999999999999999999988999999999999998

>d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=3.9e-33  Score=234.61  Aligned_cols=143  Identities=59%  Similarity=0.970  Sum_probs=130.6

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhC-CCCcEEEEEecCC-chhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcCCC
Q 018512           43 FKVAILGAAGGIGQPLAMLMKIN-PLVSVLHLYDVVN-TPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGV  120 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~-~~~~ei~L~D~~~-~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~ag~  120 (354)
                      |||+|||++|+||+++++.|+.+ +...||+|+|+++ ++|+++||.|.........+..+++ +++++|||+||+++|.
T Consensus         1 MKV~IiGaaG~VG~~~a~~l~~~~~~~~el~L~D~~~~~~g~a~Dl~h~~~~~~~~~~~~~~~-~~~~~~aDvvvitaG~   79 (145)
T d2cmda1           1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPVTPGVAVDLSHIPTAVKIKGFSGEDA-TPALEGADVVLISAGV   79 (145)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHSCTTCEEEEECSSTTHHHHHHHHHTSCSSCEEEEECSSCC-HHHHTTCSEEEECCSC
T ss_pred             CEEEEEcCCChHHHHHHHHHHhCCCCCcEEEEecccccchhHHHHHHCCccccCCcEEEcCCC-ccccCCCCEEEECCCc
Confidence            79999997799999999988754 7888999999987 6899999999876555666655566 4789999999999999


Q ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCCchHHHHHHHHHhCCCCCCCEEE
Q 018512          121 PRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLG  186 (354)
Q Consensus       121 ~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~~~~~~~~~~p~~kviG  186 (354)
                      |+++|++|.|++..|.++++++++++.+++|+++++++|||+|.+++++++++++.++||++|+||
T Consensus        80 ~~k~g~~R~dl~~~N~~i~~~v~~~i~~~~p~aivivvtNPvD~m~~~~~~v~~~~~~l~~~RviG  145 (145)
T d2cmda1          80 RRKPGMDRSDLFNVNAGIVKNLVQQVAKTCPKACIGIITNPVNTTVAIAAEVLKKAGVYDKNKLFG  145 (145)
T ss_dssp             CCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECSSSHHHHHHHHHHHHHHTTCCCGGGEEE
T ss_pred             cCCCCcchhhHHHHHHHHHHHHHHHHHhhCCCcEEEEccCCchHHHHHHHHHHHHcCCCChhhccC
Confidence            999999999999999999999999999999999999999999999999999999999999999998

>d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]

Probab=100.00  E-value=3.3e-33  Score=234.49  Aligned_cols=139  Identities=27%  Similarity=0.414  Sum_probs=123.7

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCCC-CeEEEEeCCCcHHhhhCCCcEEEEcC
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTG-AVVRGFLGQPQLENALTGMDLVIIPA  118 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~~-~~v~~~~~~~d~~~al~~aDvVIi~a  118 (354)
                      |.||+|||+ |+||+++|+.++.+++.+||+|+|+++  ++|+++||+|.... ...... .++++ ++++|||+||+++
T Consensus         1 p~Ki~IIGa-G~VG~~~a~~l~~~~l~~ElvL~D~~~~~~~g~a~Dl~~a~~~~~~~~i~-~~~~~-~~~~daDvVVita   77 (143)
T d1llda1           1 PTKLAVIGA-GAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSID-GSDDP-EICRDADMVVITA   77 (143)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGGGSTTCEEE-EESCG-GGGTTCSEEEECC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccccchhHHHHHHhccccCCCceee-cCCCH-HHhhCCcEEEEec
Confidence            469999998 999999999999999999999999988  78999999997532 222222 23464 7899999999999


Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCCchHHHHHHHHHhCCCCCCCEEEe
Q 018512          119 GVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV  187 (354)
Q Consensus       119 g~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~~~~~~~~~~p~~kviG~  187 (354)
                      |.++++|++|.|++..|++++++++++|.+++|+++++++|||+|++|+++    ++.+|||++||||+
T Consensus        78 G~~~~~g~~R~dl~~~N~~i~~~i~~~i~~~~p~ai~ivvtNPvDvmt~~~----~~~sg~p~~rViG~  142 (143)
T d1llda1          78 GPRQKPGQSRLELVGATVNILKAIMPNLVKVAPNAIYMLITNPVDIATHVA----QKLTGLPENQIFGS  142 (143)
T ss_dssp             CCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTSEEEECCSSHHHHHHHH----HHHHTCCTTSEEEC
T ss_pred             ccccCCCCchhhhhhhhHHHHHHHHHHHHhhCCCeEEEEeCCchHHHHHHH----HHHHCCChhhccCC
Confidence            999999999999999999999999999999999999999999999998654    78899999999997

>d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=99.97  E-value=1.2e-32  Score=230.86  Aligned_cols=136  Identities=28%  Similarity=0.510  Sum_probs=123.0

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCC----CCeEEEEeCCCcHHhhhCCCcEEEE
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDT----GAVVRGFLGQPQLENALTGMDLVII  116 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~----~~~v~~~~~~~d~~~al~~aDvVIi  116 (354)
                      |||+|||+ |+||+++|+.|+.+++.+||+|+|+++  ++|+++||+|...    ...+..   ++|+ ++++|||+||+
T Consensus         1 MKI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~alDl~~~~~~~~~~~~i~~---~~d~-~~~~~adiVvi   75 (142)
T d1ojua1           1 MKLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVG---GADY-SLLKGSEIIVV   75 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEE---ESCG-GGGTTCSEEEE
T ss_pred             CEEEEECc-CHHHHHHHHHHHhcCcCceEEEEecccchhhHHHHHHhhhccccCCCCcccc---CCCH-HHhccccEEEE
Confidence            89999998 999999999999999999999999988  6899999999642    233332   3564 78999999999


Q ss_pred             cCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCCchHHHHHHHHHhCCCCCCCEEEe
Q 018512          117 PAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV  187 (354)
Q Consensus       117 ~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~~~~~~~~~~p~~kviG~  187 (354)
                      ++|.|+++|++|.|++.+|+++++++++++.+++|+++++++|||+|++++++    ++.+|||++||||+
T Consensus        76 tag~~~~~g~~r~~l~~~n~~i~~~i~~~i~~~~p~aivivvtNPvD~~t~~~----~k~sg~p~~rViG~  142 (142)
T d1ojua1          76 TAGLARKPGMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVTNPMDVMTYIM----WKESGKPRNEVFGM  142 (142)
T ss_dssp             CCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECSSSHHHHHHHH----HHHSCCCTTSEEEC
T ss_pred             eccccCCCCCchHHHHHHhhHHHHHHHHHHHhhCCCcEEEEecCChHHHHHHH----HHHHCCChhcEecC
Confidence            99999999999999999999999999999999999999999999999998754    88999999999996

>d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.97  E-value=1.5e-32  Score=232.18  Aligned_cols=138  Identities=25%  Similarity=0.332  Sum_probs=123.7

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCCC--CeEEEEeCCCcHHhhhCCCcEEEEc
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTG--AVVRGFLGQPQLENALTGMDLVIIP  117 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~~--~~v~~~~~~~d~~~al~~aDvVIi~  117 (354)
                      ..||+|||| |+||+++|+.|+.+++.+||+|+|+++  ++|+++||+|+...  ..++..  +.| +++++|||+||++
T Consensus         6 ~~KI~IiGa-G~vG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~~~--~~d-~~~l~daDvvvit   81 (148)
T d1ldna1           6 GARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIW--HGD-YDDCRDADLVVIC   81 (148)
T ss_dssp             SCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEE--ECC-GGGTTTCSEEEEC
T ss_pred             CCeEEEECc-CHHHHHHHHHHHhcCCCceEEEEeeccccccchhccHhhCccccCCCeEEE--ECC-HHHhccceeEEEe
Confidence            349999998 999999999999999999999999987  68999999997532  234433  346 4889999999999


Q ss_pred             CCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCCchHHHHHHHHHhCCCCCCCEEEe
Q 018512          118 AGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV  187 (354)
Q Consensus       118 ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~~~~~~~~~~p~~kviG~  187 (354)
                      +|.++++|++|.|++.+|++++++++++|.++||+++++++|||+|++|+++    ++.+|||++||||+
T Consensus        82 ag~~~~~~~~R~dl~~~N~~i~~~i~~~i~~~~p~a~~ivvtNPvd~~t~~~----~k~sg~p~~rViG~  147 (148)
T d1ldna1          82 AGANQKPGETRLDLVDKNIAIFRSIVESVMASGFQGLFLVATNPVDILTYAT----WKFSGLPHERVIGS  147 (148)
T ss_dssp             CSCCCCTTTCSGGGHHHHHHHHHHHHHHHHHHTCCSEEEECSSSHHHHHHHH----HHHHTCCGGGEEEC
T ss_pred             cccccccCcchhHHHHHHHHHHHHHHHHHHhhCCCceEEEecCccHHHHHHH----HHHHCcChhheecC
Confidence            9999999999999999999999999999999999999999999999998764    78899999999997

>d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Clostridium thermocellum [TaxId: 1515]

Probab=99.97  E-value=1.4e-31  Score=224.42  Aligned_cols=137  Identities=29%  Similarity=0.395  Sum_probs=116.0

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCC-CCeEEEEeCCCcHHhhhCCCcEEEEcCC
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDT-GAVVRGFLGQPQLENALTGMDLVIIPAG  119 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~-~~~v~~~~~~~d~~~al~~aDvVIi~ag  119 (354)
                      .||+|||| |+||+++++.++.+++.+||+|+|+++  ++|+++||.|+.. .......  +.+ +++++|||+||+++|
T Consensus         2 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~--~~~-~~~~~~adivvitag   77 (142)
T d1y6ja1           2 SKVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLY--AGD-YSDVKDCDVIVVTAG   77 (142)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC----C-GGGGTTCSEEEECCC
T ss_pred             CeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeccCCccceeeeeeccCcccCCCeeEe--eCc-HHHhCCCceEEEecc
Confidence            49999998 999999999999999999999999988  7899999999753 2334432  345 578999999999999


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCCchHHHHHHHHHhCCCCCCCEEEe
Q 018512          120 VPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV  187 (354)
Q Consensus       120 ~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~~~~~~~~~~p~~kviG~  187 (354)
                      .++++|++|.|++.+|++++++++++|.+++|+++++++|||+|++|++    +++.+|||++||||+
T Consensus        78 ~~~~~~~~r~~l~~~N~~i~~~i~~~i~~~~p~ai~ivvtNPvdv~t~~----~~k~sg~p~~rViG~  141 (142)
T d1y6ja1          78 ANRKPGETRLDLAKKNVMIAKEVTQNIMKYYNHGVILVVSNPVDIITYM----IQKWSGLPVGKVIGS  141 (142)
T ss_dssp             C------CHHHHHHHHHHHHHHHHHHHHHHCCSCEEEECSSSHHHHHHH----HHHHHTCCTTTEEEC
T ss_pred             cccCcCcchhHHhhHHHHHHHHHHHHhhccCCCceEEEecChHHHHHHH----HHHHHCCCccceecC
Confidence            9999999999999999999999999999999999999999999999865    488899999999996

>d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=99.97  E-value=8.7e-32  Score=225.32  Aligned_cols=137  Identities=29%  Similarity=0.500  Sum_probs=122.3

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCC-CCeEEEEeCCCcHHhhhCCCcEEEEcCC
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDT-GAVVRGFLGQPQLENALTGMDLVIIPAG  119 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~-~~~v~~~~~~~d~~~al~~aDvVIi~ag  119 (354)
                      |||+|||| |+||+++++.++.+++.+||+|+|+++  ++++++|+.|... .......  +++ +++++|||+||+++|
T Consensus         1 mKI~IIGa-G~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~~~Dl~~~~~~~~~~~~~--~~~-~~~~~~adivvitag   76 (140)
T d1a5za1           1 MKIGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIY--AGD-YADLKGSDVVIVAAG   76 (140)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEE--ECC-GGGGTTCSEEEECCC
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEecccccccchhcccccccccccccccc--CCc-HHHhcCCCEEEEecc
Confidence            79999998 999999999999999999999999987  7889999998642 2233333  245 578999999999999


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCCchHHHHHHHHHhCCCCCCCEEEe
Q 018512          120 VPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV  187 (354)
Q Consensus       120 ~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~~~~~~~~~~p~~kviG~  187 (354)
                      .++++|++|.|++.+|+++++++++.|.++||++|++++|||+|++|+++    ++.+|||++||||+
T Consensus        77 ~~~~~g~~r~dl~~~N~~I~~~i~~~i~~~~p~aivivvtNPvd~~t~~~----~k~sg~p~~rViGt  140 (140)
T d1a5za1          77 VPQKPGETRLQLLGRNARVMKEIARNVSKYAPDSIVIVVTNPVDVLTYFF----LKESGMDPRKVFGS  140 (140)
T ss_dssp             CCCCSSCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECSSSHHHHHHHH----HHHHTCCTTTEEEC
T ss_pred             cccCCCcchhhhhccccchHHHHHHHHHhcCCCcEEEEeCCcHHHHHHHH----HHHHCcCccceeCc
Confidence            99999999999999999999999999999999999999999999998654    78889999999995

>d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Haloarcula marismortui [TaxId: 2238]

Probab=99.97  E-value=1.9e-31  Score=223.22  Aligned_cols=137  Identities=28%  Similarity=0.392  Sum_probs=120.4

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC----chhHHHHHhcCCC-CCeEEEEeCCCcHHhhhCCCcEEEEc
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN----TPGVTADISHMDT-GAVVRGFLGQPQLENALTGMDLVIIP  117 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~----~~g~~~dl~~~~~-~~~v~~~~~~~d~~~al~~aDvVIi~  117 (354)
                      .||+||||+|+||+++|+.|+.+++.+||+|+|++.    ++|+++||.|... ....+..  +.+ +++++|||+||++
T Consensus         1 sKV~IiGaaG~VG~~~A~~l~~~~l~~el~L~Di~~~~~~~~g~a~Dl~~~~~~~~~~~i~--~~~-~~~~~~aDiVvit   77 (142)
T d1o6za1           1 TKVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVR--QGG-YEDTAGSDVVVIT   77 (142)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEE--ECC-GGGGTTCSEEEEC
T ss_pred             CeEEEECCCCcHHHHHHHHHHhCCCCCEEEEEecCCcccccceeecchhhcccccCCceEe--eCC-HHHhhhcCEEEEe
Confidence            399999966999999999999999999999999864    5688999998432 2223332  235 4779999999999


Q ss_pred             CCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCCchHHHHHHHHHhCCCCCCCEEE
Q 018512          118 AGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLG  186 (354)
Q Consensus       118 ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~~~~~~~~~~p~~kviG  186 (354)
                      ||.|+++|++|.|++..|+++++++++.+.+++|+++++++|||+|+++++    +++.+|||++||||
T Consensus        78 aG~~~~~g~~R~dl~~~N~~I~~~i~~~i~~~~p~~i~ivvtNPvDvmt~~----~~k~sg~~~~rViG  142 (142)
T d1o6za1          78 AGIPRQPGQTRIDLAGDNAPIMEDIQSSLDEHNDDYISLTTSNPVDLLNRH----LYEAGDRSREQVIG  142 (142)
T ss_dssp             CCCCCCTTCCHHHHHHHHHHHHHHHHHHHHTTCSCCEEEECCSSHHHHHHH----HHHHSSSCGGGEEE
T ss_pred             cccccccCCchhhHHHHHHHHHHHHHHHHHhcCCCceEEEecChHHHHHHH----HHHHHCcCcccccC
Confidence            999999999999999999999999999999999999999999999999765    48999999999998

>d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]

Probab=99.97  E-value=9.2e-32  Score=229.32  Aligned_cols=138  Identities=22%  Similarity=0.340  Sum_probs=123.1

Q ss_pred             CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCCC--CeEEEEeCCCcHHhhhCCCcEEEE
Q 018512           41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTG--AVVRGFLGQPQLENALTGMDLVII  116 (354)
Q Consensus        41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~~--~~v~~~~~~~d~~~al~~aDvVIi  116 (354)
                      +..||+|||+ |+||+++++.|+.+++++||+|+|+++  ++|+++||+|....  .....  ...| +++++|||+||+
T Consensus        19 ~~~KV~IIGa-G~VG~~~A~~l~~~~l~~ElvLiD~~~~~a~g~alDl~h~~~~~~~~~~~--~~~d-~~~~~~adiVVi   94 (160)
T d1i0za1          19 PNNKITVVGV-GQVGMACAISILGKSLADELALVDVLEDKLKGEMMDLQHGSLFLQTPKIV--ADKD-YSVTANSKIVVV   94 (160)
T ss_dssp             CSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCCCSEEE--ECSS-GGGGTTCSEEEE
T ss_pred             CCCeEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccchhHHHHHHHhccccccCCCeEE--eccc-hhhcccccEEEE
Confidence            3459999998 999999999999999999999999987  78999999997532  22222  2456 478999999999


Q ss_pred             cCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCCchHHHHHHHHHhCCCCCCCEEE
Q 018512          117 PAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLG  186 (354)
Q Consensus       117 ~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~~~~~~~~~~p~~kviG  186 (354)
                      +||.++++|++|.|++..|++++++++++|.+++|+++++++|||+|++++++    ++.+|||++||||
T Consensus        95 tAg~~~~~g~tR~~l~~~N~~i~~~i~~~i~~~~p~aiiivvtNPvDv~t~~~----~k~sglp~~rViG  160 (160)
T d1i0za1          95 TAGVRQQEGESRLNLVQRNVNVFKFIIPQIVKYSPDCIIIVVSNPVDILTYVT----WKLSGLPKHRVIG  160 (160)
T ss_dssp             CCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECSSSHHHHHHHH----HHHHCCCGGGEEE
T ss_pred             ecCCccccCcchHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeCCchHHHHHHH----HHHHCcCcccccC
Confidence            99999999999999999999999999999999999999999999999998764    7888999999998

>d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chlorobium vibrioforme [TaxId: 1098]

Probab=99.97  E-value=6.7e-32  Score=226.64  Aligned_cols=138  Identities=32%  Similarity=0.504  Sum_probs=122.2

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCC--CCeEEEEeCCCcHHhhhCCCcEEEEcC
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDT--GAVVRGFLGQPQLENALTGMDLVIIPA  118 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~--~~~v~~~~~~~d~~~al~~aDvVIi~a  118 (354)
                      |||+|||| |+||+++++.|+..++.+||+|+|+++  +++.++|+.|...  ....+.. .+++ +++++|||+||+++
T Consensus         1 mKI~IIGa-G~VG~~la~~l~~~~l~~el~L~Di~~~~~~~~~~d~~~~~~~~~~~~~i~-~~~~-~~~~~dadvvvita   77 (142)
T d1guza1           1 MKITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVT-GSND-YADTANSDIVIITA   77 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEE-EESC-GGGGTTCSEEEECC
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCCceEEEeccccccchhhhhhhhcccchhcccceEE-ecCC-HHHhcCCeEEEEEE
Confidence            79999998 999999999999999999999999988  6788899988742  2222222 1345 57899999999999


Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCCchHHHHHHHHHhCCCCCCCEEEe
Q 018512          119 GVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV  187 (354)
Q Consensus       119 g~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~~~~~~~~~~p~~kviG~  187 (354)
                      |.|+++|++|.|++.+|+++++++++.+.++||++|++++|||+|++++++    ++.+|||++||||+
T Consensus        78 g~~~~~g~~r~~l~~~N~~i~~~i~~~i~~~~p~aivivvtNPvd~~~~~~----~~~sg~p~~rviG~  142 (142)
T d1guza1          78 GLPRKPGMTREDLLMKNAGIVKEVTDNIMKHSKNPIIIVVSNPLDIMTHVA----WVRSGLPKERVIGM  142 (142)
T ss_dssp             SCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCSSCEEEECCSSHHHHHHHH----HHHHCSCGGGEEEE
T ss_pred             ecCCCCCCchHHHHHHHHHHHHHHHHHhhccCCCeEEEEecCChHHHHHHH----HHHhCCChHhEeeC
Confidence            999999999999999999999999999999999999999999999998764    78889999999996

>d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH
species: Lactobacillus confusus [TaxId: 1583]

Probab=99.97  E-value=3.4e-32  Score=229.12  Aligned_cols=137  Identities=18%  Similarity=0.244  Sum_probs=115.4

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCCC--CeEEEEeCCCcHHhhhCCCcEEEEcC
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTG--AVVRGFLGQPQLENALTGMDLVIIPA  118 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~~--~~v~~~~~~~d~~~al~~aDvVIi~a  118 (354)
                      +||+|||+ |+||+++++.|+.+++.+||+|+|+++  ++|+++||+|....  ......  ++| +++++|||+||++|
T Consensus         2 kKI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~~~Dl~~a~~~~~~~~~~~--~~d-~~~l~~adiVVita   77 (146)
T d1hyha1           2 RKIGIIGL-GNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIV--IND-WAALADADVVISTL   77 (146)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEE--ESC-GGGGTTCSEEEECC
T ss_pred             CeEEEECc-CHHHHHHHHHHHhcCCCceEEEEecccchhhhHHHhhhccccccCCcccee--ccC-HHHhccccEEEEec
Confidence            59999998 999999999999999989999999987  68999999997532  223332  346 47899999999999


Q ss_pred             CCCC----CCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCCchHHHHHHHHHhCCCCCCCEEEe
Q 018512          119 GVPR----KPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV  187 (354)
Q Consensus       119 g~~~----~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~~~~~~~~~~p~~kviG~  187 (354)
                      |.++    ++|++|.|++..|+++++++++.++++||++|++++|||+|++|+++    ++.+|||++||||+
T Consensus        78 G~~~~~~~~~g~~R~~l~~~N~~i~~~i~~~i~~~~p~aivivvtNPvD~~t~~~----~k~sg~p~~rViGt  146 (146)
T d1hyha1          78 GNIKLQQDNPTGDRFAELKFTSSMVQSVGTNLKESGFHGVLVVISNPVDVITALF----QHVTGFPAHKVIGT  146 (146)
T ss_dssp             SCGGGTC-------CTTHHHHHHHHHHHHHHHHHTTCCSEEEECSSSHHHHHHHH----HHHHCCCGGGEEEC
T ss_pred             cccccccccCCccHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEecCcHHHHHHHH----HHHhCCCccceeCc
Confidence            9876    67899999999999999999999999999999999999999998654    88899999999995

>d1mlda2 d.162.1.1 (A:145-313) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=99.97  E-value=1.5e-30  Score=224.57  Aligned_cols=167  Identities=53%  Similarity=0.837  Sum_probs=145.2

Q ss_pred             eccchHHHHHHHHHHHhCCCCCCCcceEEeecCCccccccccccCCCCCCChHHHHHHHHHHhcchhHHHhhhccCCcch
Q 018512          187 VTMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSAT  266 (354)
Q Consensus       187 ~t~ld~~r~~~~la~~l~v~~~~v~~~v~G~hg~~~~vp~~s~~~v~~~~~~~~~~~i~~~v~~~~~~i~~~~~~kg~~~  266 (354)
                      +|.||++||++++|++||++|++|+++|+|+||+.+++|+||.+.++..+..++++++.+++++++++|++.+.+.+++.
T Consensus         1 ~T~LDs~R~~~~la~~l~v~~~~V~~~ViGeHg~~t~vp~~s~~~~~~~~~~~~~~~l~~~v~~~~~eii~~k~~~~~~~   80 (169)
T d1mlda2           1 VTTLDIVRANAFVAELKGLDPARVSVPVIGGHAGKTIIPLISQCTPKVDFPQDQLSTLTGRIQEAGTEVVKAKAGAGSAT   80 (169)
T ss_dssp             CCHHHHHHHHHHHHHHTTCCGGGCBCCEEECSSGGGEEECGGGCBSCCCCCHHHHHHHHHHHHHHHHHHHHHHTTSCSCC
T ss_pred             CcccHHHHHHHHHHHHHCcCHHHeeEEEEEcCCCcceeehhhhhccCCCCcHHHHHHHHHHHHHhHHHHHHhhcCcChHh
Confidence            37899999999999999999999999999999665788888888887788888999999999999999999886667788


Q ss_pred             hhHHHHHHHHHHHHHhccCCCCcEEEeeeeeccCCCccEEEEeEEEcCCCeEEeccCCCCCHHHHHHHHHHHHHHHHHHH
Q 018512          267 LSMAYAAVKFADACLRGLRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSIQ  346 (354)
Q Consensus       267 ~s~A~a~~~ii~si~~~~~~~~~v~~~~~~~g~~~~~~~~svPv~ig~~Gv~~i~~~~~L~~~E~~~l~~sa~~i~~~~~  346 (354)
                      ++++.++++++.+++.+..+...+.+++.......+++|+|+||+||++|+++++++++|+++|+++|++|++.|++.++
T Consensus        81 ~~~~~a~~~~~~~i~~~~~~~~~v~~~~~~~~~~~~~v~~s~P~~ig~~Gi~~v~~l~~L~~~E~~~l~~s~~~lk~~I~  160 (169)
T d1mlda2          81 LSMAYAGARFVFSLVDAMNGKEGVVECSFVKSQETDCPYFSTPLLLGKKGIEKNLGIGKISPFEEKMIAEAIPELKASIK  160 (169)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTCTTCEEEEEEECCSSSSSEEEEEEEEETTEEEEECCCCSCCHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhccccCCceEEEEEeeccccccCCEeEeeeEEEcCCccEEEecCCCCCHHHHHHHHHHHHHHHHHHH
Confidence            89999999999999877654444554444322224689999999999999999999767999999999999999999999


Q ss_pred             Hhhhhhc
Q 018512          347 KGISFSK  353 (354)
Q Consensus       347 ~~~~~~~  353 (354)
                      ++++|++
T Consensus       161 ~g~~fi~  167 (169)
T d1mlda2         161 KGEEFVK  167 (169)
T ss_dssp             HHHHHHT
T ss_pred             HHHHHHh
Confidence            9999986

>d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: MJ0490, lactate/malate dehydrogenase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=99.97  E-value=5.9e-31  Score=221.18  Aligned_cols=138  Identities=30%  Similarity=0.472  Sum_probs=119.4

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC----chhHHHHHhcCCC--CCeEEEE-eCCCcHHhhhCCCcEEE
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN----TPGVTADISHMDT--GAVVRGF-LGQPQLENALTGMDLVI  115 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~----~~g~~~dl~~~~~--~~~v~~~-~~~~d~~~al~~aDvVI  115 (354)
                      |||+||||+|+||+++|+.|+.+++.+||+|+|+++    ++|+++||.|+..  ...++.. ..+.+ +++++|||+||
T Consensus         1 MKV~IiGA~G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~~~~d-~~~l~~aDvVV   79 (145)
T d1hyea1           1 MKVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVESDEN-LRIIDESDVVI   79 (145)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEETTC-GGGGTTCSEEE
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCcccccccccchhhhHhhhcccccchhcccccccCCccccCCcch-HHHhccceEEE
Confidence            799999977999999999999999999999999986    4688999999532  2233332 22345 57899999999


Q ss_pred             EcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCCchHHHHHHHHHhCCCCCCCEEE
Q 018512          116 IPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLG  186 (354)
Q Consensus       116 i~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~~~~~~~~~~p~~kviG  186 (354)
                      ++||.|+++|++|.|++..|+++++++++.+.+++|++++ ++|||+|++++++    ++.+|||++||||
T Consensus        80 itAG~~~~~g~sR~dl~~~Na~iv~~i~~~i~~~~~~~ii-vVtNPvD~mt~~~----~k~sg~p~~rViG  145 (145)
T d1hyea1          80 ITSGVPRKEGMSRMDLAKTNAKIVGKYAKKIAEICDTKIF-VITNPVDVMTYKA----LVDSKFERNQVFG  145 (145)
T ss_dssp             ECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCCCEEE-ECSSSHHHHHHHH----HHHHCCCTTSEEE
T ss_pred             EecccccCCCCChhhhhhhhHHHHHHHHHHHhccCCCeEE-EEcCchHHHHHHH----HHHHCcCcccccC
Confidence            9999999999999999999999999999999999998864 6899999998764    7888999999998

>d1ojua2 d.162.1.1 (A:164-331) Lactate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: Lactate dehydrogenase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=99.97  E-value=1.3e-30  Score=219.97  Aligned_cols=145  Identities=18%  Similarity=0.248  Sum_probs=128.6

Q ss_pred             ccchHHHHHHHHHHHhCCCCCCC-cceEEeecCCccccccccccCCCCCCChHHHHHHHHHHhcchhHHHhhhccCCcch
Q 018512          188 TMLDVVRANTFVAEVLGLDPRDV-DVPVVGGHAGVTILPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSAT  266 (354)
Q Consensus       188 t~ld~~r~~~~la~~l~v~~~~v-~~~v~G~hg~~~~vp~~s~~~v~~~~~~~~~~~i~~~v~~~~~~i~~~~~~kg~~~  266 (354)
                      |.||++||++.|++..+   .++ +++|+||||+ ++||+||.+.+...   .+++++.+++++.+++|++.   ||+|+
T Consensus         2 t~LDsaR~r~~l~~~~~---~~v~~a~ViGeHGd-s~vp~~S~~~i~g~---~~~~~i~~~v~~~g~eIi~~---kG~t~   71 (152)
T d1ojua2           2 NQLDSQRLKERLYNAGA---RNIRRAWIIGEHGD-SMFVAKSLADFDGE---VDWEAVENDVRFVAAEVIKR---KGATI   71 (152)
T ss_dssp             HHHHHHHHHHHHHHTTC---BSCCCCCEEBCSST-TCEECGGGCCCBSC---CCHHHHHHHHHTTHHHHHHH---HSSCC
T ss_pred             CccHHHHHHHHHHccCC---CCcceeEEEecCCC-ccccccccccccCc---cchhHhHHHHHHHHHHhhhh---cccee
Confidence            57999999999977654   445 8999999999 99999999998543   24678899999999999994   58999


Q ss_pred             hhHHHHHHHHHHHHHhccCCCCcEEEee-eeeccC-CCccEEEEeEEEcCCCeEEeccCCCCCHHHHHHHHHHHHHHHHH
Q 018512          267 LSMAYAAVKFADACLRGLRGDAGVVECA-FVASQV-TELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGS  344 (354)
Q Consensus       267 ~s~A~a~~~ii~si~~~~~~~~~v~~~~-~~~g~~-~~~~~~svPv~ig~~Gv~~i~~~~~L~~~E~~~l~~sa~~i~~~  344 (354)
                      ||+|.++++++++|++|.+   .++|++ +++|+| .+|+|+|+||+||++|+ +++++ +|+++|+++|++|++.|++.
T Consensus        72 ~gia~a~~~iv~aIl~d~~---~v~pvs~~l~geyG~~dv~lsvP~vig~~Gv-ei~~l-~L~~~E~~~l~~Sa~~ik~~  146 (152)
T d1ojua2          72 FGPAVAIYRMVKAVVEDTG---EIIPTSMILQGEYGIENVAVGVPAKLGKNGA-EVADI-KLSDEEIEKLRNSAKILRER  146 (152)
T ss_dssp             HHHHHHHHHHHHHHHTTCC---CEEEEEEEEESGGGCEEEEEEEEEEEETTEE-EECCC-CCCHHHHHHHHHHHHHHHHH
T ss_pred             ccHHHHHHHHHHHHHhcCC---CceeeeEEeccccCCCCEEEEeEEEECCCce-EEEcC-CCCHHHHHHHHHHHHHHHHH
Confidence            9999999999999999976   489997 679999 67999999999999998 58885 99999999999999999999


Q ss_pred             HHH
Q 018512          345 IQK  347 (354)
Q Consensus       345 ~~~  347 (354)
                      ++.
T Consensus       147 i~~  149 (152)
T d1ojua2         147 LEE  149 (152)
T ss_dssp             HHT
T ss_pred             HHH
Confidence            875

>d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Lactobacillus pentosus [TaxId: 1589]

Probab=99.97  E-value=2.4e-31  Score=223.99  Aligned_cols=138  Identities=25%  Similarity=0.397  Sum_probs=113.3

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCC-CCeEEEEeCCCcHHhhhCCCcEEEEcC
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDT-GAVVRGFLGQPQLENALTGMDLVIIPA  118 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~-~~~v~~~~~~~d~~~al~~aDvVIi~a  118 (354)
                      .|||+|||+ |+||+++|+.|+.+++..||+|+|+++  ++|+++|++|... .......  ++|+ ++++|||+||+++
T Consensus         5 ~~KI~IIGa-G~VG~~~A~~l~~~~~~~elvL~D~~~~~~~g~a~Dl~~a~~~~~~~~~~--~~d~-~~~~~adivvita   80 (146)
T d1ez4a1           5 HQKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIY--SGEY-SDCKDADLVVITA   80 (146)
T ss_dssp             BCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEE--ECCG-GGGTTCSEEEECC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhcCCCcEEEEeecccchhHHHHHHHhccccccCCceEe--eccH-HHhccccEEEEec
Confidence            569999998 999999999999999999999999988  7899999999753 2222322  3465 6799999999999


Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCCchHHHHHHHHHhCCCCCCCEEEe
Q 018512          119 GVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV  187 (354)
Q Consensus       119 g~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~~~~~~~~~~p~~kviG~  187 (354)
                      |.++++|++|.|++..|+++++++++.|.+++|+++++++|||+|+++++    +++.+|||++||||+
T Consensus        81 g~~~~~g~~r~~l~~~N~~i~~~~~~~i~~~~p~aivivvtNPvdv~t~~----~~k~sg~p~~rViG~  145 (146)
T d1ez4a1          81 GAPQKPGESRLDLVNKNLNILSSIVKPVVDSGFDGIFLVAANPVDILTYA----TWKFSGFPKERVIGS  145 (146)
T ss_dssp             CC----------CHHHHHHHHHHHHHHHHHTTCCSEEEECSSSHHHHHHH----HHHHHCCCGGGEEEC
T ss_pred             ccccCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCcEEEEeCCccHHHHHH----HHHHHCcCccceecC
Confidence            99999999999999999999999999999999999999999999999865    478899999999997

>d1guza2 d.162.1.1 (A:143-305) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]}

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: Malate dehydrogenase
species: Chlorobium vibrioforme [TaxId: 1098]

Probab=99.97  E-value=1.5e-30  Score=223.24  Aligned_cols=153  Identities=28%  Similarity=0.471  Sum_probs=139.4

Q ss_pred             cchHHHHHHHHHHHhCCCCCCCcceEEeecCCccccccccccCCCC-----CCChHHHHHHHHHHhcchhHHHhhhccCC
Q 018512          189 MLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPC-----SFTQEETEYLTNRIQNGGTEVVEAKAGAG  263 (354)
Q Consensus       189 ~ld~~r~~~~la~~l~v~~~~v~~~v~G~hg~~~~vp~~s~~~v~~-----~~~~~~~~~i~~~v~~~~~~i~~~~~~kg  263 (354)
                      +||++||++++|+++|+++.+|+++|||+||+ +++|+||++.+++     .++++.++++.+++++++.++++.+ |||
T Consensus         3 ~LDs~R~~~~lA~~l~v~~~~V~~~ViG~Hg~-s~vp~~s~~~i~g~~~~~~~~~~~~~~~~~~v~~~g~~ii~~~-~kg   80 (163)
T d1guza2           3 VLDAARFRSFIAMELGVSMQDINACVLGGHGD-AMVPVVKYTTVAGIPISDLLPAETIDKLVERTRNGGAEIVEHL-KQG   80 (163)
T ss_dssp             HHHHHHHHHHHHHHHTCCGGGEECCEEECSGG-GEEECGGGCEETTEEHHHHSCHHHHHHHHHHHHTHHHHHHHHH-SSS
T ss_pred             ccHHHHHHHHHHHHHCcCHHHeEEEEEcCCCC-CcccCHhhcccCCccccccCCHHHHHHHHHHHHHHHHHHHHHh-cCC
Confidence            69999999999999999999999999999999 9999999999854     2566678899999999999999865 789


Q ss_pred             cchhhHHHHHHHHHHHHHhccCCCCcEEEee-eeeccC-CCccEEEEeEEEcCCCeEEeccCCCCCHHHHHHHHHHHHHH
Q 018512          264 SATLSMAYAAVKFADACLRGLRGDAGVVECA-FVASQV-TELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKEL  341 (354)
Q Consensus       264 ~~~~s~A~a~~~ii~si~~~~~~~~~v~~~~-~~~g~~-~~~~~~svPv~ig~~Gv~~i~~~~~L~~~E~~~l~~sa~~i  341 (354)
                      ++.|++|.++++++++++.+.+   .++|++ +.+|+| .+++|||+||++|++|+++++++ +|+++|+++|++|++.|
T Consensus        81 sa~~a~~~~~~~~~~~i~~~~~---~~~~~~~~~~~~~g~~~~~~s~P~~lg~~Gv~~i~~l-~Ls~~E~~~l~~sa~~l  156 (163)
T d1guza2          81 SAFYAPASSVVEMVESIVLDRK---RVLPCAVGLEGQYGIDKTFVGVPVKLGRNGVEQIYEI-NLDQADLDLLQKSAKIV  156 (163)
T ss_dssp             CCCHHHHHHHHHHHHHHHTTCC---EEEEEEEEEESGGGCEEEEEEEEEEEETTEEEEECCC-CCCHHHHHHHHHHHHHH
T ss_pred             CcchhHHHHHHHHHHheeccCC---CEEEEeeeeccccCCCCcEEEEeeEEcCCeeEEEecC-CCCHHHHHHHHHHHHHH
Confidence            9999999999999999998876   477776 568998 77999999999999999999995 99999999999999999


Q ss_pred             HHHHHH
Q 018512          342 AGSIQK  347 (354)
Q Consensus       342 ~~~~~~  347 (354)
                      ++.++.
T Consensus       157 ~~~i~~  162 (163)
T d1guza2         157 DENCKM  162 (163)
T ss_dssp             HHHHHT
T ss_pred             HHHHhh
Confidence            998874

>d1uxja2 d.162.1.1 (A:144-307) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]}

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: Malate dehydrogenase
species: Chloroflexus aurantiacus [TaxId: 1108]

Probab=99.97  E-value=1.8e-30  Score=222.98  Aligned_cols=154  Identities=29%  Similarity=0.434  Sum_probs=140.4

Q ss_pred             cchHHHHHHHHHHHhCCCCCCCcceEEeecCCccccccccccCCCC-----CCChHHHHHHHHHHhcchhHHHhhhccCC
Q 018512          189 MLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPC-----SFTQEETEYLTNRIQNGGTEVVEAKAGAG  263 (354)
Q Consensus       189 ~ld~~r~~~~la~~l~v~~~~v~~~v~G~hg~~~~vp~~s~~~v~~-----~~~~~~~~~i~~~v~~~~~~i~~~~~~kg  263 (354)
                      +||++||++++|+++|++|++|+++|||+||+ +++|+||.+.+++     .+++..++++.++++++++++++.+ +||
T Consensus         3 ~LD~~R~~~~lA~~l~v~~~~V~~~ViG~Hg~-~~v~~~s~~~i~g~~~~~~~~~~~~~~~~~~v~~~g~~ii~~~-~kg   80 (164)
T d1uxja2           3 VLDAARYRTFIAMEAGVSVKDVQAMLMGGHGD-EMVPLPRFSTISGIPVSEFIAPDRLAQIVERTRKGGGEIVNLL-KTG   80 (164)
T ss_dssp             HHHHHHHHHHHHHHHTCCGGGEEECCEECSGG-GEECCGGGEEETTEEGGGTSCHHHHHHHHHHHHTHHHHHHHHH-SSS
T ss_pred             ccHHHHHHHHHHHHHCcCHHHeEEEEEcCCCC-ceeeeeeeeecCCCchhhccchhhHHHHHHHHHHHHHHHHHHH-hcC
Confidence            68999999999999999999999999999999 9999999999853     3466678999999999999998865 689


Q ss_pred             cchhhHHHHHHHHHHHHHhccCCCCcEEEee-eeeccC-CCccEEEEeEEEcCCCeEEeccCCCCCHHHHHHHHHHHHHH
Q 018512          264 SATLSMAYAAVKFADACLRGLRGDAGVVECA-FVASQV-TELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKEL  341 (354)
Q Consensus       264 ~~~~s~A~a~~~ii~si~~~~~~~~~v~~~~-~~~g~~-~~~~~~svPv~ig~~Gv~~i~~~~~L~~~E~~~l~~sa~~i  341 (354)
                      ++.|++|.++++++++|+.+.+   .++|++ +++|+| .+++|||+||++|++|+++++++ +||++|+++|++|++.|
T Consensus        81 s~~~a~a~a~~~i~~~i~~~~~---~~~~~~~~~~g~ygi~~~~~s~P~~ig~~Gv~~v~~l-~L~~~E~~~l~~s~~~l  156 (164)
T d1uxja2          81 SAYYAPAAATAQMVEAVLKDKK---RVMPVAAYLTGQYGLNDIYFGVPVILGAGGVEKILEL-PLNEEEMALLNASAKAV  156 (164)
T ss_dssp             CCCHHHHHHHHHHHHHHHTTCC---EEEEEEEEEESGGGCEEEEEEEEEEEETTEEEEECCC-CCCHHHHHHHHHHHHHH
T ss_pred             cccchHHHHHHHHHHHHhCCCC---ceeeeeeeeccccCCCCceEEECeEEeCCeeEEEeCC-CCCHHHHHHHHHHHHHH
Confidence            9999999999999999999876   377776 679999 67899999999999999999996 99999999999999999


Q ss_pred             HHHHHHh
Q 018512          342 AGSIQKG  348 (354)
Q Consensus       342 ~~~~~~~  348 (354)
                      ++.++..
T Consensus       157 k~~i~~l  163 (164)
T d1uxja2         157 RATLDTL  163 (164)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHhh
Confidence            9998763

>d1ez4a2 d.162.1.1 (A:163-334) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]}

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: Lactate dehydrogenase
species: Lactobacillus pentosus [TaxId: 1589]

Probab=99.97  E-value=1.7e-30  Score=224.54  Aligned_cols=158  Identities=18%  Similarity=0.335  Sum_probs=143.6

Q ss_pred             ccchHHHHHHHHHHHhCCCCCCCcceEEeecCCccccccccccCCCC----------CCChHHHHHHHHHHhcchhHHHh
Q 018512          188 TMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPC----------SFTQEETEYLTNRIQNGGTEVVE  257 (354)
Q Consensus       188 t~ld~~r~~~~la~~l~v~~~~v~~~v~G~hg~~~~vp~~s~~~v~~----------~~~~~~~~~i~~~v~~~~~~i~~  257 (354)
                      |.||+.||++++|+++|++|++|+++|||+||+ +++|+||++++.+          .+..+++.++.+.++.++.++++
T Consensus         1 T~LD~~R~~~~lA~~l~v~~~~V~~~ViG~Hg~-t~vp~~s~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~   79 (171)
T d1ez4a2           1 TSLDSSRLRVALGKQFNVDPRSVDAYIMGEHGD-SEFAAYSTATIGTRPVRDVAKEQGVSDDDLAKLEDGVRNKAYDIIN   79 (171)
T ss_dssp             THHHHHHHHHHHHHHHTCCGGGEECCEESSSSS-SCEECGGGCEETTEEHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             CchHHHHHHHHHHHHHCcCHHHeEEEEEccCCC-cccccccccccCCccceeecccccccchhhhhheeehhhhhHHHHH
Confidence            679999999999999999999999999999999 9999999998753          35666788889999999999988


Q ss_pred             hhccCCcchhhHHHHHHHHHHHHHhccCCCCcEEEee-eeeccC-CCccEEEEeEEEcCCCeEEeccCCCCCHHHHHHHH
Q 018512          258 AKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECA-FVASQV-TELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLE  335 (354)
Q Consensus       258 ~~~~kg~~~~s~A~a~~~ii~si~~~~~~~~~v~~~~-~~~g~~-~~~~~~svPv~ig~~Gv~~i~~~~~L~~~E~~~l~  335 (354)
                      .   ++++.|++|.++++++++++.+.+   .+++++ +++|+| .+++|||+||++|++|+++++++ +|+++|+++|+
T Consensus        80 ~---k~s~~~a~a~~~~~~~~~i~~~~~---~~~~~~~~~~~~~g~~~~~~S~Pv~lg~~Gv~~v~~l-~Ls~~E~~~l~  152 (171)
T d1ez4a2          80 L---KGATFYGIGTALMRISKAILRDEN---AVLPVGAYMDGQYGLNDIYIGTPAIIGGTGLKQIIES-PLSADELKKMQ  152 (171)
T ss_dssp             H---HSCCCHHHHHHHHHHHHHHHTTCC---EEEEEEEEEESGGGCEEEEEEEEEEEETTEEEEECCC-CCCHHHHHHHH
T ss_pred             h---hhhHhHHHHHHHHHHHHHHhccCC---ceEEEEEeeccccCccceeeeEEEEEcCCcEEEEeCC-CCCHHHHHHHH
Confidence            4   589999999999999999999875   377775 679998 78999999999999999999996 99999999999


Q ss_pred             HHHHHHHHHHHHhhhhhc
Q 018512          336 KAKKELAGSIQKGISFSK  353 (354)
Q Consensus       336 ~sa~~i~~~~~~~~~~~~  353 (354)
                      +|++.|++.++.+++.+|
T Consensus       153 ~s~~~l~~~i~~~l~~l~  170 (171)
T d1ez4a2         153 DSAATLKKVLNDGLAELE  170 (171)
T ss_dssp             HHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHHhc
Confidence            999999999999999876

>d2cmda2 d.162.1.1 (A:146-312) Malate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: Malate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=99.97  E-value=6.1e-30  Score=220.13  Aligned_cols=167  Identities=53%  Similarity=0.792  Sum_probs=144.6

Q ss_pred             eccchHHHHHHHHHHHhCCCCCCCcceEEeecCCccccccccccCCCCCCChHHHHHHHHHHhcchhHHHhhhccCCcch
Q 018512          187 VTMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSAT  266 (354)
Q Consensus       187 ~t~ld~~r~~~~la~~l~v~~~~v~~~v~G~hg~~~~vp~~s~~~v~~~~~~~~~~~i~~~v~~~~~~i~~~~~~kg~~~  266 (354)
                      +|.||++||++++|+++|++|++|+++|+|+||+.+++|++|.+. +..+++.+++++.+++++++.++++.+.|++++.
T Consensus         1 ~T~LDs~R~~~~iA~~l~v~~~~V~~~ViGghg~~~~~p~~s~~~-~~~~~~~~~~~l~~~v~~~g~~ii~~~~~~~~~~   79 (167)
T d2cmda2           1 VTTLDIIRSNTFVAELKGKQPGEVEVPVIGGHSGVTILPLLSQVP-GVSFTEQEVADLTKRIQNAGTEVVEAKAGGGSAT   79 (167)
T ss_dssp             CCHHHHHHHHHHHHHHHTCCGGGCCCCEEECSSTTTEEECGGGCT-TCCCCHHHHHHHHHHHHHHHHHHHHHHTTSCSCC
T ss_pred             CcccHHHHHHHHHHHHHCcCHHHeEEEEEEcCCCceEeeeccccc-CCCCcHHHHHHHHHHHHhhhhhhhhhhccCcchH
Confidence            378999999999999999999999999999999845566556544 3567888899999999999999999887889999


Q ss_pred             hhHHHHHHHHHHHHHhccCCCCcEEEeeeeeccCCCccEEEEeEEEcCCCeEEeccCCCCCHHHHHHHHHHHHHHHHHHH
Q 018512          267 LSMAYAAVKFADACLRGLRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSIQ  346 (354)
Q Consensus       267 ~s~A~a~~~ii~si~~~~~~~~~v~~~~~~~g~~~~~~~~svPv~ig~~Gv~~i~~~~~L~~~E~~~l~~sa~~i~~~~~  346 (354)
                      ||+|.++++++++|+.+.++...+..+++.....++++|||+||+||++|+++++++++|+++|+++|++|+++|++.++
T Consensus        80 ~~~a~a~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~s~P~~ig~~Gv~~v~~l~~L~~~E~~~l~~s~~~lk~~I~  159 (167)
T d2cmda2          80 LSMGQAAARFGLSLVRALQGEQGVVECAYVEGDGQYARFFSQPLLLGKNGVEERKSIGTLSAFEQNALEGMLDTLKKDIA  159 (167)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTCSSCEEEEEEECCCSSCSEEEEEEEEETTEEEEECCCCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhccCCCceEEEEEcccccccCCCccccccEEEeCCceEEEeeCCCCCHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999998876554544344433346789999999999999999999757999999999999999999999


Q ss_pred             HhhhhhcC
Q 018512          347 KGISFSKK  354 (354)
Q Consensus       347 ~~~~~~~~  354 (354)
                      ++++|+.+
T Consensus       160 ~~~~fi~~  167 (167)
T d2cmda2         160 LGQEFVNK  167 (167)
T ss_dssp             HHHHHHHC
T ss_pred             HHHHHhcC
Confidence            99999865

>d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.97  E-value=3.4e-31  Score=225.67  Aligned_cols=140  Identities=24%  Similarity=0.362  Sum_probs=123.2

Q ss_pred             CCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCCC-CeEEEEeCCCcHHhhhCCCcEEEE
Q 018512           40 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTG-AVVRGFLGQPQLENALTGMDLVII  116 (354)
Q Consensus        40 ~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~~-~~v~~~~~~~d~~~al~~aDvVIi  116 (354)
                      .+..||+|||+ |+||+++|+.|+..++++||+|+|+++  ++|+++||+|+... ..-... .+.| ++++++||+||+
T Consensus        17 ~~~~KI~IIGa-G~VG~~~A~~l~~~~l~~elvL~D~~~~~a~g~alDl~~~~~~~~~~~~~-~~~d-~~~~~~adivvi   93 (159)
T d2ldxa1          17 LSRCKITVVGV-GDVGMACAISILLKGLADELALVDADTDKLRGEALDLQHGSLFLSTPKIV-FGKD-YNVSANSKLVII   93 (159)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHTTTSCSEEEEECSCHHHHHHHHHHHHHTTTTCSCCEEE-EESS-GGGGTTEEEEEE
T ss_pred             CCCCeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCchhhhccHHHHhCcchhcCCCeEE-eccc-hhhhccccEEEE
Confidence            34459999998 999999999999999999999999987  78999999997642 111111 2346 478999999999


Q ss_pred             cCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCCchHHHHHHHHHhCCCCCCCEEE
Q 018512          117 PAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLG  186 (354)
Q Consensus       117 ~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~~~~~~~~~~p~~kviG  186 (354)
                      ++|.++++|++|.|++..|+++++++++++.+++|+++++++|||+|+++|++    ++.+|||++||||
T Consensus        94 tag~~~~~~~~R~dll~~N~~i~~~i~~~i~~~~p~~ivivvtNPvDv~t~~~----~k~sg~p~~rV~G  159 (159)
T d2ldxa1          94 TAGARMVSGQTRLDLLQRNVAIMKAIVPGVIQNSPDCKIIVVTNPVDILTYVV----WKISGFPVGRVIG  159 (159)
T ss_dssp             CCSCCCCTTTCSSCTTHHHHHHHHHHTTTHHHHSTTCEEEECSSSHHHHHHHH----HHHHCSCTTTEEE
T ss_pred             ecccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeEEEEeCCcHHHHHHHH----HHHHCcCcccccC
Confidence            99999999999999999999999999999999999999999999999998764    7889999999998

>d1llda2 d.162.1.1 (A:150-319) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]}

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: Lactate dehydrogenase
species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]

Probab=99.96  E-value=5.9e-30  Score=220.94  Aligned_cols=152  Identities=17%  Similarity=0.337  Sum_probs=136.5

Q ss_pred             ccchHHHHHHHHHHHhCCCCCCCcceEEeecCCccccccccccCCCC-------------CCChHHHHHHHHHHhcchhH
Q 018512          188 TMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPC-------------SFTQEETEYLTNRIQNGGTE  254 (354)
Q Consensus       188 t~ld~~r~~~~la~~l~v~~~~v~~~v~G~hg~~~~vp~~s~~~v~~-------------~~~~~~~~~i~~~v~~~~~~  254 (354)
                      |.||++||++++|+++|+++++|+++|||+||+ ++||+||++++.+             .+....++++.+.+++++++
T Consensus         1 T~LDs~R~~~~lA~~l~v~~~~V~~~ViG~Hg~-~~vp~~s~~~v~g~~~~~~~~~~~~~~~~~~~~~~i~~~v~~~g~~   79 (170)
T d1llda2           1 TNLDSARLRFLIAQQTGVNVKNVHAYIAGEHGD-SEVPLWESATIGGVPMSDWTPLPGHDPLDADKREEIHQEVKNAAYK   79 (170)
T ss_dssp             THHHHHHHHHHHHHHHTCCGGGEECCEEBSSST-TCEECTTSCEETTEEGGGCCCCTTCCCCCHHHHHHHHHHHHHHHHH
T ss_pred             CchHHHHHHHHHHHHHCcCHHHeEEEEEcCCCC-CcccchhhcccCCCchhhhcccccccccchhhHHHHHHHHhhhhhH
Confidence            679999999999999999999999999999999 9999999988632             23455678999999999999


Q ss_pred             HHhhhccCCcchhhHHHHHHHHHHHHHhccCCCCcEEEee-eeeccC-CCccEEEEeEEEcCCCeEEeccCCCCCHHHHH
Q 018512          255 VVEAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECA-FVASQV-TELPFFASKVRLGRQGAEEIFQLGPLNEYERI  332 (354)
Q Consensus       255 i~~~~~~kg~~~~s~A~a~~~ii~si~~~~~~~~~v~~~~-~~~g~~-~~~~~~svPv~ig~~Gv~~i~~~~~L~~~E~~  332 (354)
                      |++   +||++.|++|.++++++++|+.+..   .+++++ +++|+| ++++|||+||++|++|+++++++ +|+++|++
T Consensus        80 i~~---~kg~t~~~~a~~~~~~~~~i~~~~~---~~~~~~~~~~~~~g~~~i~~s~P~~lg~~Gv~~i~~l-~L~~~E~~  152 (170)
T d1llda2          80 IIN---GKGATNYAIGMSGVDIIEAVLHDTN---RILPVSSMLKDFHGISDICMSVPTLLNRQGVNNTINT-PVSDKELA  152 (170)
T ss_dssp             HHT---SCCSCCHHHHHHHHHHHHHHHTTCC---EEEEEEEECSSBTTBCSSEEEEEEEEETTEEECCSCC-CCCHHHHH
T ss_pred             HHh---hhccchhhhHHHHHHHHHHHHcCCC---ceeeeeccccCccCCCCeeEeeccEEcCCeeEEEecC-CCCHHHHH
Confidence            998   5789999999999999999999875   477776 678988 78999999999999999999995 99999999


Q ss_pred             HHHHHHHHHHHHHHH
Q 018512          333 GLEKAKKELAGSIQK  347 (354)
Q Consensus       333 ~l~~sa~~i~~~~~~  347 (354)
                      +|++|++.||+.++.
T Consensus       153 ~l~~sa~~lk~~~~~  167 (170)
T d1llda2         153 ALKRSAETLKETAAQ  167 (170)
T ss_dssp             HHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHH
Confidence            999999999988753

>d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=99.96  E-value=8.3e-31  Score=221.48  Aligned_cols=139  Identities=31%  Similarity=0.530  Sum_probs=120.0

Q ss_pred             CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCC--CCeEEEEeCCCcHHhhhCCCcEEEE
Q 018512           41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDT--GAVVRGFLGQPQLENALTGMDLVII  116 (354)
Q Consensus        41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~--~~~v~~~~~~~d~~~al~~aDvVIi  116 (354)
                      +..||+|||+ |+||+++++.|+++++ .||+|+|+++  ++|+++|++|...  ....... .+.+ +++++|||+||+
T Consensus         2 p~~KI~IIGa-G~VG~~~a~~l~~~~l-~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~v~-~~~~-~~~~~~advvvi   77 (150)
T d1t2da1           2 PKAKIVLVGS-GMIGGVMATLIVQKNL-GDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVS-GSNT-YDDLAGADVVIV   77 (150)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTC-CEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEE-EECC-GGGGTTCSEEEE
T ss_pred             CCCeEEEECC-CHHHHHHHHHHHhCCC-CeEEEEeccCCcceeeecchhhhccccCCCcEEE-eccc-ccccCCCcEEEE
Confidence            3569999998 9999999999988886 5999999988  7899999999742  1222221 1234 588999999999


Q ss_pred             cCCCCCCCCCC-----HHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCCchHHHHHHHHHhCCCCCCCEEEe
Q 018512          117 PAGVPRKPGMT-----RDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV  187 (354)
Q Consensus       117 ~ag~~~~~g~~-----r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~~~~~~~~~~p~~kviG~  187 (354)
                      ++|.++++|++     |.|++..|+++++++++.++++||+++++++|||+|++++++    ++.+|||++||||+
T Consensus        78 tag~~~~~g~~~~~~~R~~l~~~N~~iv~~i~~~i~~~~p~aivivvtNPvD~~t~~~----~~~sg~p~~rViG~  149 (150)
T d1t2da1          78 TAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKNCPNAFIIVVTNPVDVMVQLL----HQHSGVPKNKIIGL  149 (150)
T ss_dssp             CCSCSSCTTCCSTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECSSSHHHHHHHH----HHHHCCCGGGEEEC
T ss_pred             ecccccCCCCCccccchhHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCchHHHHHHH----HHHHCCCchheecc
Confidence            99999999876     999999999999999999999999999999999999998764    78899999999997

>d7mdha2 d.162.1.1 (A:198-385) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]}

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: Malate dehydrogenase
species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]

Probab=99.96  E-value=9.4e-30  Score=222.75  Aligned_cols=160  Identities=18%  Similarity=0.153  Sum_probs=136.1

Q ss_pred             ccchHHHHHHHHHHHhCCCCCCCc-ceEEeecCCccccccccccCCCC-----CCChHH--HHHHHHHHhcchhHHHhhh
Q 018512          188 TMLDVVRANTFVAEVLGLDPRDVD-VPVVGGHAGVTILPLLSQVKPPC-----SFTQEE--TEYLTNRIQNGGTEVVEAK  259 (354)
Q Consensus       188 t~ld~~r~~~~la~~l~v~~~~v~-~~v~G~hg~~~~vp~~s~~~v~~-----~~~~~~--~~~i~~~v~~~~~~i~~~~  259 (354)
                      |.||++||+++||+++||+|++|+ .+|||+||+ ++||+||.+++..     .+.++.  .+++.+.++++++++++.+
T Consensus         1 T~LDs~R~r~~lA~~l~V~~~~V~~~iI~GeHGd-s~vp~~S~a~v~g~~l~~~~~~~~~~~~~~~~~v~~~~~~ii~~k   79 (188)
T d7mdha2           1 TRLDENRAKCQLALKAGVFYDKVSNVTIWGNHST-TQVPDFLNAKIDGRPVKEVIKRTKWLEEEFTITVQKRGGALIQKW   79 (188)
T ss_dssp             CHHHHHHHHHHHHHHTTSCGGGEECCEEEBCSST-TCEEECSSCEETTEEGGGTCCCHHHHHHHHHHHHHTHHHHHHHHT
T ss_pred             CccHHHHHHHHHHHHHCcCHHHeeEEEEEEcCCC-cEeeeeeccEeeccchhhcccchhhhHHHHHHHHhhhHHHHHHhh
Confidence            679999999999999999999996 568899999 9999999999753     233343  4789999999999999975


Q ss_pred             ccCCcchhhHHHHHHHHHHHHHhccCCCCcEEEee-eeecc-C--CCccEEEEeEEEcCCCeEEeccCCCCCHHHHHHHH
Q 018512          260 AGAGSATLSMAYAAVKFADACLRGLRGDAGVVECA-FVASQ-V--TELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLE  335 (354)
Q Consensus       260 ~~kg~~~~s~A~a~~~ii~si~~~~~~~~~v~~~~-~~~g~-~--~~~~~~svPv~ig~~Gv~~i~~~~~L~~~E~~~l~  335 (354)
                        ++++.+|+|.|+++++++|+++++... +++++ +++|+ |  ++|+|||+||+||++|+++++...+|+++|+++|+
T Consensus        80 --g~s~~~s~A~A~~~~~~ai~~~~~~~~-~~s~~v~~~g~~YGi~~~v~~s~Pv~ig~~G~~~iv~~l~L~~~e~~~l~  156 (188)
T d7mdha2          80 --GRSSAASTAVSIADAIKSLVTPTPEGD-WFSTGVYTTGNPYGIAEDIVFSMPCRSKGDGDYELATDVSNDDFLWERIK  156 (188)
T ss_dssp             --SSCCHHHHHHHHHHHHHHHHSCCCTTC-CEEEEEECTTCSSCCCSSSEEEEEEECCSSSCCEECCCCCCCHHHHHHHH
T ss_pred             --cccchhhHHHHHHHHHHHHHcCCCCCc-eEEEEEEeCCCccCCCCCeEEEEeeEECCCccEEEeCCCCCCHHHHHHHH
Confidence              456677899999999999999987543 66776 56885 8  57999999999999999999764599999999999


Q ss_pred             HHHHHHHHHHHHhhhh
Q 018512          336 KAKKELAGSIQKGISF  351 (354)
Q Consensus       336 ~sa~~i~~~~~~~~~~  351 (354)
                      +|+++|+++.+.+..+
T Consensus       157 ~S~~eL~~e~~~v~~L  172 (188)
T d7mdha2         157 KSEAELLAEKKCVAHL  172 (188)
T ss_dssp             HHHHHHHHHHHHTHHH
T ss_pred             HHHHHHHHHHHHHHHh
Confidence            9999999887766433

>d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Toxoplasma gondii [TaxId: 5811]

Probab=99.96  E-value=1.1e-30  Score=221.91  Aligned_cols=139  Identities=34%  Similarity=0.590  Sum_probs=122.1

Q ss_pred             CCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCC----CCeEEEEeCCCcHHhhhCCCcE
Q 018512           40 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDT----GAVVRGFLGQPQLENALTGMDL  113 (354)
Q Consensus        40 ~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~----~~~v~~~~~~~d~~~al~~aDv  113 (354)
                      ++.+||+|||| |+||+++|+.|+..++. |++|+|+++  ++|+++|+.|...    ...+..   +++++++++|||+
T Consensus         5 ~k~~KI~IIGa-G~VG~~lA~~l~~~~~~-el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~---~~~~~~~~~~adi   79 (154)
T d1pzga1           5 QRRKKVAMIGS-GMIGGTMGYLCALRELA-DVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRA---EYSYEAALTGADC   79 (154)
T ss_dssp             SCCCEEEEECC-SHHHHHHHHHHHHHTCC-EEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEE---ECSHHHHHTTCSE
T ss_pred             cCCCcEEEECC-CHHHHHHHHHHHhCCCc-eEEEEEeccccchhHHHHHhhhccccCCeeEEec---cCchhhhhcCCCe
Confidence            45679999999 99999999999888864 899999988  6899999999632    222332   3567789999999


Q ss_pred             EEEcCCCCCCCCC-----CHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCCchHHHHHHHHHhCCCCCCCEEEe
Q 018512          114 VIIPAGVPRKPGM-----TRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV  187 (354)
Q Consensus       114 VIi~ag~~~~~g~-----~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~~~~~~~~~~p~~kviG~  187 (354)
                      ||+++|.++++|+     +|.+++..|+++++++++.+.++||+++++++|||+|++++++    ++.+|||++||||+
T Consensus        80 Vvitag~~~~~g~~~~~~tR~~l~~~n~~iv~~i~~~i~~~~p~aiviivsNPvd~lt~~~----~~~sg~p~~rViG~  154 (154)
T d1pzga1          80 VIVTAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKYCPKTFIIVVTNPLDCMVKVM----CEASGVPTNMICGM  154 (154)
T ss_dssp             EEECCSCSSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECCSSHHHHHHHH----HHHHCCCGGGEEEC
T ss_pred             EEEecccccCCCCCCcccchhhhhhhhHHHHHHHHHHHHhcCCCcEEEEeCCcHHHHHHHH----HHHhCcChhcEecC
Confidence            9999999999985     8999999999999999999999999999999999999998764    78889999999996

>d1pzga2 d.162.1.1 (A:164-334) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]}

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: Lactate dehydrogenase
species: Toxoplasma gondii [TaxId: 5811]

Probab=99.96  E-value=1.4e-29  Score=219.27  Aligned_cols=154  Identities=27%  Similarity=0.441  Sum_probs=133.4

Q ss_pred             ccchHHHHHHHHHHHhCCCCCCCcceEEeecCCccccccccccCCCC----------CCChHHHHHHHHHHhcchhHHHh
Q 018512          188 TMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPC----------SFTQEETEYLTNRIQNGGTEVVE  257 (354)
Q Consensus       188 t~ld~~r~~~~la~~l~v~~~~v~~~v~G~hg~~~~vp~~s~~~v~~----------~~~~~~~~~i~~~v~~~~~~i~~  257 (354)
                      |+||++||++++|+++||+|++|+++|||+||+ +++|+||++++.+          .....++.+.....+.++..++.
T Consensus         2 c~LDs~R~~~~lA~~l~v~~~~V~~~ViG~Hg~-t~vp~~S~~~i~g~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~   80 (174)
T d1pzga2           2 CMLDSGRFRRYVADALSVSPRDVQATVIGTHGD-CMVPLVRYITVNGYPIQKFIKDGVVTEKQLEEIAEHTKVSGGEIVR   80 (174)
T ss_dssp             HHHHHHHHHHHHHHHHTSCGGGEECCEEBCSST-TCEECGGGCEETTEEHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHH
T ss_pred             cccHHHHHHHHHHHHhCcCHHHcEEEEEccCCC-ccccceeeeeECCEechhhccccchhhhhhhhhhheeeccceeEee
Confidence            799999999999999999999999999999999 9999999998753          12344556666666777777776


Q ss_pred             hhccCCcchhhHHHHHHHHHHHHHhccCCCCcEEEee-eeeccC-CCccEEEEeEEEcCCCeEEeccCCCCCHHHHHHHH
Q 018512          258 AKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECA-FVASQV-TELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLE  335 (354)
Q Consensus       258 ~~~~kg~~~~s~A~a~~~ii~si~~~~~~~~~v~~~~-~~~g~~-~~~~~~svPv~ig~~Gv~~i~~~~~L~~~E~~~l~  335 (354)
                      .+ ++|++.|++|.++++++++|+.+.+   .+++++ +.+|+| .+++|||+||+||++|++.++++ +||++|+++|+
T Consensus        81 ~~-~~gst~~~~a~a~~~~~~~i~~~~~---~~~~~s~~~~~~yGi~~v~~s~Pv~ig~~Gi~~v~~l-~l~~~E~~~l~  155 (174)
T d1pzga2          81 FL-GQGSAYYAPAASAVAMATSFLNDEK---RVIPCSVYCNGEYGLKDMFIGLPAVIGGAGIERVIEL-ELNEEEKKQFQ  155 (174)
T ss_dssp             HH-SSSCCCHHHHHHHHHHHHHHHTTCC---EEEEEEEEEESGGGCEEEEEEEEEEEETTEEEEECCC-CCCHHHHHHHH
T ss_pred             ee-cccchhhhhHHHHHHHHHhhcccCC---ceEEeeeccccccCCCCceeeeeeEEcCCcEEEEeCC-CCCHHHHHHHH
Confidence            54 7899999999999999999999875   478887 568999 56899999999999999999996 99999999999


Q ss_pred             HHHHHHHHHHHH
Q 018512          336 KAKKELAGSIQK  347 (354)
Q Consensus       336 ~sa~~i~~~~~~  347 (354)
                      +|++.|++..+.
T Consensus       156 ~s~~~l~~~~~~  167 (174)
T d1pzga2         156 KSVDDVMALNKA  167 (174)
T ss_dssp             HHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHH
Confidence            999999986554

>d5mdha2 d.162.1.1 (A:155-333) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=99.96  E-value=9.8e-30  Score=221.41  Aligned_cols=161  Identities=22%  Similarity=0.252  Sum_probs=138.6

Q ss_pred             ccchHHHHHHHHHHHhCCCCCCCcce-EEeecCCccccccccccCCCC-C----------CChHHHHHHHHHHhcchhHH
Q 018512          188 TMLDVVRANTFVAEVLGLDPRDVDVP-VVGGHAGVTILPLLSQVKPPC-S----------FTQEETEYLTNRIQNGGTEV  255 (354)
Q Consensus       188 t~ld~~r~~~~la~~l~v~~~~v~~~-v~G~hg~~~~vp~~s~~~v~~-~----------~~~~~~~~i~~~v~~~~~~i  255 (354)
                      |.||++||++++|+++||+|++|+++ |||+||+ ++||+||++++++ +          +.....+++.+.++++++.+
T Consensus         1 T~LDs~R~r~~la~~l~V~~~~V~~~vI~GeHG~-s~vp~~S~a~v~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i   79 (179)
T d5mdha2           1 TRLDHNRAKAQIALKLGVTSDDVKNVIIWGNHSS-TQYPDVNHAKVKLQAKEVGVYEAVKDDSWLKGEFITTVQQRGAAV   79 (179)
T ss_dssp             CHHHHHHHHHHHHHHHTCCGGGEECCEEEBCSST-TCEEECTTCEEECSSCEEEHHHHHCCHHHHHTHHHHHHHHHHHHH
T ss_pred             CccHHHHHHHHHHHHHCcCHHHcEEEEEEEcCCC-cccccchhceecCcchhhhhhhccccchhhHHHHHHHHHhccHhh
Confidence            67999999999999999999999775 5599999 9999999999743 1          12233567888899999999


Q ss_pred             HhhhccCCcchhhHHHHHHHHHHHHHhccCCCCcEEEee-eeec-cC--CCccEEEEeEEEcCCCeEEeccCCCCCHHHH
Q 018512          256 VEAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECA-FVAS-QV--TELPFFASKVRLGRQGAEEIFQLGPLNEYER  331 (354)
Q Consensus       256 ~~~~~~kg~~~~s~A~a~~~ii~si~~~~~~~~~v~~~~-~~~g-~~--~~~~~~svPv~ig~~Gv~~i~~~~~L~~~E~  331 (354)
                      ++.+  ++++.|++|.++++++++|+++.++.. +++++ +.+| +|  ++++|||+||++|++|+.++.++ +||++|+
T Consensus        80 ~~~~--~~ss~~~~a~a~~~~~~~i~~~~~~~~-~~s~~v~~~g~~yGi~~~v~~s~P~~lg~~Gv~~v~~l-~L~~~E~  155 (179)
T d5mdha2          80 IKAR--KLSSAMSAAKAICDHVRDIWFGTPEGE-FVSMGIISDGNSYGVPDDLLYSFPVTIKDKTWKIVEGL-PINDFSR  155 (179)
T ss_dssp             HHHH--SSCCCHHHHHHHHHHHHHHHHCCCTTC-CEEEEEECTTCSSSCCSSCEEEEEEEEETTEEEECCCC-CCCHHHH
T ss_pred             hhcc--CcchHHHHHHHHHHHHHHHHhhcccCC-ceeEEEEccCcccCCccceEEeeeEEEcCCcEEEEeCC-CCCHHHH
Confidence            8865  567889999999999999999987654 55554 5676 57  68999999999999999999996 9999999


Q ss_pred             HHHHHHHHHHHHHHHHhhhhhc
Q 018512          332 IGLEKAKKELAGSIQKGISFSK  353 (354)
Q Consensus       332 ~~l~~sa~~i~~~~~~~~~~~~  353 (354)
                      ++|++|++.|+++++.+++++.
T Consensus       156 ~~l~~Sa~~L~~~~~~~~~~l~  177 (179)
T d5mdha2         156 EKMDLTAKELAEEKETAFEFLS  177 (179)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHhc
Confidence            9999999999999999998764

>d1y6ja2 d.162.1.1 (A:149-317) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]}

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: Lactate dehydrogenase
species: Clostridium thermocellum [TaxId: 1515]

Probab=99.96  E-value=8.6e-30  Score=219.71  Aligned_cols=153  Identities=19%  Similarity=0.336  Sum_probs=135.3

Q ss_pred             ccchHHHHHHHHHHHhCCCCCCCcceEEeecCCccccccccccCCCC----C--------CChHHHHHHHHHHhcchhHH
Q 018512          188 TMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPC----S--------FTQEETEYLTNRIQNGGTEV  255 (354)
Q Consensus       188 t~ld~~r~~~~la~~l~v~~~~v~~~v~G~hg~~~~vp~~s~~~v~~----~--------~~~~~~~~i~~~v~~~~~~i  255 (354)
                      |.||++||++++|+++|++|++|+++|||+||+ +++|+||++.+++    .        +..++++++.+++++.++++
T Consensus         1 T~LDs~R~~~~la~~lgv~~~~V~~~ViG~Hg~-t~vp~~s~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i   79 (169)
T d1y6ja2           1 TVLDSIRFRYLLSEKLGVDVKNVHGYIIGEHGD-SQLPLWSCTHIAGKNINEYIDDPKCNFTEEDKKKIAEDVKTAGATI   79 (169)
T ss_dssp             THHHHHHHHHHHHTTTTCCTTTEECCEEBCSSS-SCEECCTTCEETTBCSCCC-----------CCHHHHHHHHHHHHHH
T ss_pred             CccHHHHHHHHHHHHhCcCHHHceEEEEccCCC-CCccCeeecccCchhHHHHHHHhhhhhhHHHHHHHHHHHhhhhhhh
Confidence            679999999999999999999999999999999 9999999998742    1        23334678888899999998


Q ss_pred             HhhhccCCcchhhHHHHHHHHHHHHHhccCCCCcEEEee-eeeccC-CCccEEEEeEEEcCCCeEEeccCCCCCHHHHHH
Q 018512          256 VEAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECA-FVASQV-TELPFFASKVRLGRQGAEEIFQLGPLNEYERIG  333 (354)
Q Consensus       256 ~~~~~~kg~~~~s~A~a~~~ii~si~~~~~~~~~v~~~~-~~~g~~-~~~~~~svPv~ig~~Gv~~i~~~~~L~~~E~~~  333 (354)
                      +.   +++++.|++|.++++++++++.+.+   .++|++ +++|+| .+++|||+||++|++|+++++++ +||++|+++
T Consensus        80 ~~---~~~s~~~a~a~~~~~~~~~i~~~~~---~~~~~~~~~~g~yg~~~i~~s~Pv~lg~~Gv~~i~~l-~Ls~~E~~~  152 (169)
T d1y6ja2          80 IK---NKGATYYGIAVSINTIVETLLKNQN---TIRTVGTVINGMYGIEDVAISLPSIVNSEGVQEVLQF-NLTPEEEEA  152 (169)
T ss_dssp             HH---HTSCCCHHHHHHHHHHHHHHHHTCC---CEECCEEEECSBTTBCSEEEECCEEEETTEEEECCCC-CCCHHHHHH
T ss_pred             hh---hhhhhhhHHHHHHHHHHHHhccCCC---CceeeeeeeccccCCcccceeeeeEEcCCcEEEEecC-CCCHHHHHH
Confidence            88   4689999999999999999999976   388887 679999 56999999999999999999996 999999999


Q ss_pred             HHHHHHHHHHHHHHh
Q 018512          334 LEKAKKELAGSIQKG  348 (354)
Q Consensus       334 l~~sa~~i~~~~~~~  348 (354)
                      |++|++.|++.++..
T Consensus       153 l~~s~~~lk~~~~~v  167 (169)
T d1y6ja2         153 LRFSAEQVKKVLNEV  167 (169)
T ss_dssp             HHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHHHh
Confidence            999999999999874

>d1a5za2 d.162.1.1 (A:164-333) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: Lactate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=99.96  E-value=4.5e-29  Score=215.66  Aligned_cols=155  Identities=24%  Similarity=0.375  Sum_probs=138.5

Q ss_pred             ccchHHHHHHHHHHHhCCCCCCCcceEEeecCCccccccccccCCCC-----------CCChHHHHHHHHHHhcchhHHH
Q 018512          188 TMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPC-----------SFTQEETEYLTNRIQNGGTEVV  256 (354)
Q Consensus       188 t~ld~~r~~~~la~~l~v~~~~v~~~v~G~hg~~~~vp~~s~~~v~~-----------~~~~~~~~~i~~~v~~~~~~i~  256 (354)
                      |.||++||++++|+++|++|.+|+++|||+||+ +++|+||.++++.           .+.++.++++.+.++.++++++
T Consensus         2 T~LDs~R~~~~lA~~l~v~~~~V~~~ViG~Hg~-t~vp~~s~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~   80 (172)
T d1a5za2           2 TVLDTARLRTLIAQHCGFSPRSVHVYVIGEHGD-SEVPVWSGAMIGGIPLQNMCQVCQKCDSKILENFAEKTKRAAYEII   80 (172)
T ss_dssp             THHHHHHHHHHHHHHHTCCGGGEECCEEBCSST-TCEECGGGCEETTEEHHHHHTTSSSCCHHHHHHHHHHHHHHHHHHH
T ss_pred             CchHHHHHHHHHHHHHCcCHHHeEEEEEecCCC-CcccchhhcccCCcchhhhhhccccccHHHhhhhHHHHhccceeEe
Confidence            679999999999999999999999999999999 9999999998742           2556667889999999999998


Q ss_pred             hhhccCCcchhhHHHHHHHHHHHHHhccCCCCcEEEee-eeeccC-CCccEEEEeEEEcCCCeEEeccCCCCCHHHHHHH
Q 018512          257 EAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECA-FVASQV-TELPFFASKVRLGRQGAEEIFQLGPLNEYERIGL  334 (354)
Q Consensus       257 ~~~~~kg~~~~s~A~a~~~ii~si~~~~~~~~~v~~~~-~~~g~~-~~~~~~svPv~ig~~Gv~~i~~~~~L~~~E~~~l  334 (354)
                      ..   ++++.|++|.++++++.+++.+.+   .+++++ +.+|+| .+++|||+||++|++|+++++++ +|+++|+++|
T Consensus        81 ~~---~~~~~~~~a~a~~~~~~~~~~~~~---~~~~~~~~~~g~~~~~~v~~s~P~~lg~~Gv~~v~~l-~Ls~~E~~~l  153 (172)
T d1a5za2          81 ER---KGATHYAIALAVADIVESIFFDEK---RVLTLSVYLEDYLGVKDLCISVPVTLGKHGVERILEL-NLNEEELEAF  153 (172)
T ss_dssp             HH---HSCCCHHHHHHHHHHHHHHHTTCC---EEEEEEEEESSBTTBCSEEEEEEEEEETTEEEEECCC-CCCHHHHHHH
T ss_pred             ec---cccchhhHHHHHHHHHHHHHhhcc---cceeeecccccccccCCeeEeeeEEEcCCceEEEeCC-CCCHHHHHHH
Confidence            84   589999999999999999998865   467776 568888 67999999999999999999996 9999999999


Q ss_pred             HHHHHHHHHHHHHhhh
Q 018512          335 EKAKKELAGSIQKGIS  350 (354)
Q Consensus       335 ~~sa~~i~~~~~~~~~  350 (354)
                      ++|++.|++.++...+
T Consensus       154 ~~sa~~lk~~i~~l~~  169 (172)
T d1a5za2         154 RKSASILKNAINEITA  169 (172)
T ss_dssp             HHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHhh
Confidence            9999999999987654

>d1t2da2 d.162.1.1 (A:151-315) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: Lactate dehydrogenase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=99.96  E-value=4.6e-29  Score=214.34  Aligned_cols=152  Identities=26%  Similarity=0.382  Sum_probs=136.5

Q ss_pred             cchHHHHHHHHHHHhCCCCCCCcceEEeecCCccccccccccCCCC----------CCChHHHHHHHHHHhcchhHHHhh
Q 018512          189 MLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPC----------SFTQEETEYLTNRIQNGGTEVVEA  258 (354)
Q Consensus       189 ~ld~~r~~~~la~~l~v~~~~v~~~v~G~hg~~~~vp~~s~~~v~~----------~~~~~~~~~i~~~v~~~~~~i~~~  258 (354)
                      .||+.||++++|+++|++|++|+++|||+||+ +++|+||+..+..          ...++++.++.+.+++++.++++ 
T Consensus         2 ~LD~~R~~~~la~~lgv~~~~V~~~ViG~Hg~-~~vp~~s~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~-   79 (165)
T d1t2da2           2 VLDTSRLKYYISQKLNVCPRDVNAHIVGAHGN-KMVLLKRYITVGGIPLQEFINNKLISDAELEAIFDRTVNTALEIVN-   79 (165)
T ss_dssp             HHHHHHHHHHHHHHHTSCGGGEECCEEBCSST-TCEECGGGCEETTEEHHHHHHTTSSCHHHHHHHHHHHHTHHHHHHH-
T ss_pred             ccHHHHHHHHHHHHHCcCHHHeEEEEEcCCCC-CcccceeecccCCcchhhhcccchhhhhhhhhhhhhhhhhhHHHhh-
Confidence            68999999999999999999999999999999 9999999988642          34566778888999999999988 


Q ss_pred             hccCCcchhhHHHHHHHHHHHHHhccCCCCcEEEee-eeeccC-CCccEEEEeEEEcCCCeEEeccCCCCCHHHHHHHHH
Q 018512          259 KAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECA-FVASQV-TELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEK  336 (354)
Q Consensus       259 ~~~kg~~~~s~A~a~~~ii~si~~~~~~~~~v~~~~-~~~g~~-~~~~~~svPv~ig~~Gv~~i~~~~~L~~~E~~~l~~  336 (354)
                        +++++.|++|.++++++++++.+.+   .++|++ +++|+| .+++|||+||++|++|+++++++ +|+++|+++|++
T Consensus        80 --~~~~~~~a~a~a~~~~~~~i~~~~~---~~~~~~v~~~g~yg~~~v~~s~Pv~lg~~Gv~~i~~l-~L~~~E~~~L~~  153 (165)
T d1t2da2          80 --LHASPYVAPAAAIIEMAESYLKDLK---KVLICSTLLEGQYGHSDIFGGTPVVLGANGVEQVIEL-QLNSEEKAKFDE  153 (165)
T ss_dssp             --HTSSCCHHHHHHHHHHHHHHHTTCC---EEEEEEEEEESGGGCEEEEEEEEEEEETTEEEEECCC-CCCHHHHHHHHH
T ss_pred             --hccceeechhHHHHHHHHHHhhccc---cceeeeeccccccccCCeeEeeeEEEcCCceEEEeCC-CCCHHHHHHHHH
Confidence              4689999999999999999999976   377776 789999 77999999999999999999996 999999999999


Q ss_pred             HHHHHHHHHHHh
Q 018512          337 AKKELAGSIQKG  348 (354)
Q Consensus       337 sa~~i~~~~~~~  348 (354)
                      |+++|++..+.|
T Consensus       154 s~~~lk~~~~~A  165 (165)
T d1t2da2         154 AIAETKRMKALA  165 (165)
T ss_dssp             HHHHHHHHHHHC
T ss_pred             HHHHHHHHHhcC
Confidence            999999887653

>d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chloroflexus aurantiacus [TaxId: 1108]

Probab=99.96  E-value=1.9e-29  Score=211.51  Aligned_cols=134  Identities=28%  Similarity=0.530  Sum_probs=110.8

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCC----CCeEEEEeCCCcHHhhhCCCcEEEE
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDT----GAVVRGFLGQPQLENALTGMDLVII  116 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~----~~~v~~~~~~~d~~~al~~aDvVIi  116 (354)
                      +||+|||+ |+||+++|+.|+.+++. +++|+|+++  +++.++|+.|...    ...+..   ++|+ ++++|||+||+
T Consensus         2 ~KI~IIGa-G~VG~~~A~~l~~~~l~-dl~l~D~~~~~~~~~~~Dl~~~~~~~~~~~~i~~---~~d~-~~~~~advvvi   75 (142)
T d1uxja1           2 KKISIIGA-GFVGSTTAHWLAAKELG-DIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTG---TNNY-ADTANSDVIVV   75 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCS-EEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEE---ESCG-GGGTTCSEEEE
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCcc-eEEEEeeccccchhHHHHhhccccccCCCCEEEe---cCcH-HHhcCCCEEEE
Confidence            49999998 99999999999988875 899999987  6889999999852    223433   3564 67999999999


Q ss_pred             cCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCCchHHHHHHHHHhCCCCCCCEEE
Q 018512          117 PAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLG  186 (354)
Q Consensus       117 ~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~~~~~~~~~~p~~kviG  186 (354)
                      +||.|+++|++|.|++..|+++++++++++.+++|+++++++|||+|++++++    ++.+|||++||||
T Consensus        76 tag~~~~~~~~r~dl~~~N~~i~~~i~~~i~k~~p~aivivvtNPvDv~t~~~----~~~sglp~~rViG  141 (142)
T d1uxja1          76 TSGAPRKPGMSREDLIKVNADITRACISQAAPLSPNAVIIMVNNPLDAMTYLA----AEVSGFPKERVIG  141 (142)
T ss_dssp             CCSCC---------CHHHHHHHHHHHHHHHGGGCTTCEEEECSSSHHHHHHHH----HHHHCCCGGGEEE
T ss_pred             eeeccCCcCcchhHHHhHHHHHHHHHHHHHhccCCCceEEEeCCchHHHHHHH----HHHHCcCcccccC
Confidence            99999999999999999999999999999999999999999999999998765    7888999999998

>d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]

Probab=99.96  E-value=1.7e-28  Score=212.40  Aligned_cols=145  Identities=22%  Similarity=0.306  Sum_probs=123.7

Q ss_pred             CCCCCeEEEEcCCCchHHHHHHHHHhCCCC-----cEEEEEecCC----chhHHHHHhcCCCCCeEEEEeCCCcHHhhhC
Q 018512           39 GAAGFKVAILGAAGGIGQPLAMLMKINPLV-----SVLHLYDVVN----TPGVTADISHMDTGAVVRGFLGQPQLENALT  109 (354)
Q Consensus        39 ~~~~~kI~IiGa~G~vG~~~a~~l~~~~~~-----~ei~L~D~~~----~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~  109 (354)
                      .+++.||+|+||+|+||+++++.|++.+++     .+|+|+|++.    +++.++|+.|+.. +.++....+++.+++++
T Consensus        21 ~k~~~kV~I~GA~G~Ig~~l~~~La~g~v~g~~~~i~L~L~di~~~~~~l~g~~mdl~d~a~-~~~~~~~~~~~~~~~~~   99 (175)
T d7mdha1          21 WKKLVNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSLY-PLLREVSIGIDPYEVFE   99 (175)
T ss_dssp             CCCCEEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTC-TTEEEEEEESCHHHHTT
T ss_pred             cCCCcEEEEECCCcHHHHHHHHHHHcCcccCCCceEEEEEecCccccchhcchhhhhccccc-ccccCccccccchhhcc
Confidence            345679999999899999999999987653     3899999877    4678899999875 33333323456689999


Q ss_pred             CCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCC-CeEEEEecCCCCCchHHHHHHHHHhCCCCCCCEEEe
Q 018512          110 GMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCP-NATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV  187 (354)
Q Consensus       110 ~aDvVIi~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p-~a~viv~tNPv~~~~~~~~~~~~~~~~~p~~kviG~  187 (354)
                      |+|+||+++|.|+++||+|.|++..|.++++++++.|.+++| +++|+++|||+|++|+++   .+.++++|++||+|+
T Consensus       100 ~aDvVvi~ag~~rkpg~tR~Dll~~N~~I~k~~~~~i~~~a~~~~~vlvv~NPvd~~t~ia---~k~a~~ip~~~i~~m  175 (175)
T d7mdha1         100 DVDWALLIGAKPRGPGMERAALLDINGQIFADQGKALNAVASKNVKVLVVGNPCNTNALIC---LKNAPDIPAKNFHAL  175 (175)
T ss_dssp             TCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHHHHHH---HHTCTTSCGGGEEEC
T ss_pred             CCceEEEeeccCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCcEEEEecCcHHHHHHHH---HHHCCCCCHHHEeCC
Confidence            999999999999999999999999999999999999999996 899999999999998865   244689999999986

>d1o6za2 d.162.1.1 (A:163-330) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]}

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: Malate dehydrogenase
species: Archaeon Haloarcula marismortui [TaxId: 2238]

Probab=99.95  E-value=2.1e-28  Score=208.77  Aligned_cols=154  Identities=25%  Similarity=0.377  Sum_probs=137.2

Q ss_pred             EeccchHHHHHHHHHHHhCCCCCCCcceEEeecCCccccccccccCCCC---CCChHHHHHHHHHHhcchhHHHhhhccC
Q 018512          186 GVTMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPC---SFTQEETEYLTNRIQNGGTEVVEAKAGA  262 (354)
Q Consensus       186 G~t~ld~~r~~~~la~~l~v~~~~v~~~v~G~hg~~~~vp~~s~~~v~~---~~~~~~~~~i~~~v~~~~~~i~~~~~~k  262 (354)
                      | |+||++||++++|+++|+++++|+++|||+||+ +++|+||++.+..   .+..++++.+.++++..+.++++   ++
T Consensus         2 G-t~LD~~R~~~~lA~~l~v~~~~V~~~ViG~Hg~-~~v~~~s~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~---~~   76 (161)
T d1o6za2           2 G-GRLDSARFRYVLSEEFDAPVQNVEGTILGEHGD-AQVPVFSKVSVDGTDPEFSGDEKEQLLGDLQESAMDVIE---RK   76 (161)
T ss_dssp             C-HHHHHHHHHHHHHHHHTCCGGGEECCEEECSST-TEEECGGGCEETTBCCCCCHHHHHHHHHHHHHHHHHHHT---TT
T ss_pred             C-chHHHHHHHHHHHHHHCcCHHHeEEEEEeCCCC-ceeeehhhhcccccccccchHHHHHHHHHhhhhHHHHHH---hh
Confidence            5 899999999999999999999999999999999 9999999998743   35566778888889998888877   56


Q ss_pred             CcchhhHHHHHHHHHHHHHhccCCCCcEEEee-eeeccC-CCccEEEEeEEEcCCCeEEeccCCCCCHHHHHHHHHHHHH
Q 018512          263 GSATLSMAYAAVKFADACLRGLRGDAGVVECA-FVASQV-TELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKE  340 (354)
Q Consensus       263 g~~~~s~A~a~~~ii~si~~~~~~~~~v~~~~-~~~g~~-~~~~~~svPv~ig~~Gv~~i~~~~~L~~~E~~~l~~sa~~  340 (354)
                      +++.+++|.++++++.+++.+.+.   +++++ +++++| ++++|||+||++|++|+++++++ +|+++|+++|++|++.
T Consensus        77 ~~s~~~~a~a~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~i~~S~Pv~ig~~Gv~~v~~l-~l~~~E~~~L~~s~~~  152 (161)
T d1o6za2          77 GATEWGPARGVAHMVEAILHDTGE---VLPASVKLEGEFGHEDTAFGVPVSLGSNGVEEIVEW-DLDDYEQDLMADAAEK  152 (161)
T ss_dssp             SSCCHHHHHHHHHHHHHHHTTCCC---EEEEEEEEESGGGCEEEEEEEEEEEETTEEEEECCC-CCCHHHHHHHHHHHHH
T ss_pred             hhhhhHHHHhhHhhhHhhhhcccc---ceeecccccccccccCceeeeeeEEcCCCEEEEeCC-CCCHHHHHHHHHHHHH
Confidence            889999999999999999988753   55665 678888 77999999999999999999995 9999999999999999


Q ss_pred             HHHHHHHh
Q 018512          341 LAGSIQKG  348 (354)
Q Consensus       341 i~~~~~~~  348 (354)
                      |++.+++.
T Consensus       153 L~~~~~~i  160 (161)
T d1o6za2         153 LSDQYDKI  160 (161)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHhh
Confidence            99998863

>d5mdha1 c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=99.95  E-value=5.6e-29  Score=211.43  Aligned_cols=143  Identities=22%  Similarity=0.375  Sum_probs=118.5

Q ss_pred             CCCCeEEEEcCCCchHHHHHHHHHhCCCC-----cEEEEEecCC----chhHHHHHhcCCCCCeEEEEeCCCcHHhhhCC
Q 018512           40 AAGFKVAILGAAGGIGQPLAMLMKINPLV-----SVLHLYDVVN----TPGVTADISHMDTGAVVRGFLGQPQLENALTG  110 (354)
Q Consensus        40 ~~~~kI~IiGa~G~vG~~~a~~l~~~~~~-----~ei~L~D~~~----~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~  110 (354)
                      ++|+||+||||+|+||+++++.|++++++     .+++|+|+++    +++..+|+.++.... ...+..+.+.+++++|
T Consensus         1 s~p~KV~IiGA~G~VG~~la~~l~~~~~~~~~~~~~L~l~d~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~   79 (154)
T d5mdha1           1 SEPIRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPL-LKDVIATDKEEIAFKD   79 (154)
T ss_dssp             CCCEEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCTT-EEEEEEESCHHHHTTT
T ss_pred             CCceEEEEECCCCHHHHHHHHHHHHHHhcCCCCccEEEEecCccchhhhhhhhhhhccccccc-ccccccCcccccccCC
Confidence            57899999998899999999999876643     4899999987    344556667765322 2222223456799999


Q ss_pred             CcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCC-eEEEEecCCCCCchHHHHHHHHHhC-CCCCCCEEEe
Q 018512          111 MDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPN-ATVNLISNPVNSTVPIAAEVFKKAG-TYDPKKLLGV  187 (354)
Q Consensus       111 aDvVIi~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~-a~viv~tNPv~~~~~~~~~~~~~~~-~~p~~kviG~  187 (354)
                      +|+||+++|.|+++|++|.|++..|.++++++++.+.+++|+ +++|++|||+|++|+++    +|.+ |||++||+|+
T Consensus        80 ~dvVVitag~~~~~g~sr~dll~~N~~i~k~~~~~i~k~a~~~~~iivvsNPvD~mt~v~----~k~s~g~P~~~v~~m  154 (154)
T d5mdha1          80 LDVAILVGSMPRRDGMERKDLLKANVKIFKCQGAALDKYAKKSVKVIVVGNPANTNCLTA----SKSAPSIPKENFSCL  154 (154)
T ss_dssp             CSEEEECCSCCCCTTCCTTTTHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHHHHHH----HHTCTTSCGGGEEEC
T ss_pred             ceEEEEecccCCCCCCchhHHHHHhHHHHHHHHHHHHhhCCCceEEEEecCcHHHHHHHH----HHHcCCCCHHHEeCC
Confidence            999999999999999999999999999999999999999975 57889999999998764    6767 9999999986

>d1hyea2 d.162.1.1 (A:146-313) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: MJ0490, lactate/malate dehydrogenase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=99.95  E-value=7.1e-29  Score=213.57  Aligned_cols=155  Identities=19%  Similarity=0.346  Sum_probs=129.0

Q ss_pred             ccchHHHHHHHHHHHhCCCCCCCcceEEeecCCccccccccccCCCC----CC---ChHHHHHHHHHHhcchhHHHhhhc
Q 018512          188 TMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPC----SF---TQEETEYLTNRIQNGGTEVVEAKA  260 (354)
Q Consensus       188 t~ld~~r~~~~la~~l~v~~~~v~~~v~G~hg~~~~vp~~s~~~v~~----~~---~~~~~~~i~~~v~~~~~~i~~~~~  260 (354)
                      |.||++||++++|+++|+++.+|+++|||+||+ +++|+||++++++    .+   ....++++..+++++++.++.   
T Consensus         3 T~LDs~R~~~~lA~~l~v~~~~V~~~ViG~Hg~-~~vp~~s~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---   78 (168)
T d1hyea2           3 THLDSLRFKVAIAKFFGVHIDEVRTRIIGEHGD-SMVPLLSATSIGGIPIQKFERFKELPIDEIIEDVKTKGEQIIR---   78 (168)
T ss_dssp             THHHHHHHHHHHHHHHTCCGGGEECCEEECSST-TEEECGGGCEETTEEGGGCGGGGGCCHHHHHHHHHHHTTSCCC---
T ss_pred             chHHHHHHHHHHHHHHCcCHHHeEEEEEcCCCC-ccccchhheeECCEecccccccchhhhhhHHHHHhhhHHHHHH---
Confidence            789999999999999999999999999999999 9999999998753    11   112256777888888888877   


Q ss_pred             cCCcchhhHHHHHHHHHHHHHhccCCCCcEEEee-eeeccC--CCccEEEEeEEEcCCCeEEeccCCCCCHHHHHHHHHH
Q 018512          261 GAGSATLSMAYAAVKFADACLRGLRGDAGVVECA-FVASQV--TELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKA  337 (354)
Q Consensus       261 ~kg~~~~s~A~a~~~ii~si~~~~~~~~~v~~~~-~~~g~~--~~~~~~svPv~ig~~Gv~~i~~~~~L~~~E~~~l~~s  337 (354)
                      .++++.|++|.+++.++++++.+.+   .+++++ ++.|+|  ++++|||+||++|++|+++++++ +||++|+++|++|
T Consensus        79 ~k~~~~~~~a~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~v~~s~Pv~lg~~Gv~~i~~l-~Ls~~E~~~l~~S  154 (168)
T d1hyea2          79 LKGGSEFGPAAAILNVVRCIVNNEK---RLLTLSAYVDGEFDGIRDVCIGVPVKIGRDGIEEVVSI-ELDKDEIIAFRKS  154 (168)
T ss_dssp             ------CCHHHHHHHHHHHHHTTCC---EEEEEEEEEESSSSSCEEEEEEEEEEEETTEEEEECCC-CCCHHHHHHHHHH
T ss_pred             hccCccccchhhhhHHHHhhhccCC---CeEEEEEEEecccCCcCCEEEeeceEEcCCcEEEEecC-CCCHHHHHHHHHH
Confidence            4578899999999999999999875   355554 677775  78999999999999999999996 9999999999999


Q ss_pred             HHHHHHHHHHhhh
Q 018512          338 KKELAGSIQKGIS  350 (354)
Q Consensus       338 a~~i~~~~~~~~~  350 (354)
                      ++.|++.++.+.+
T Consensus       155 a~~lk~~~~~~k~  167 (168)
T d1hyea2         155 AEIIKKYCEEVKN  167 (168)
T ss_dssp             HHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHhc
Confidence            9999999988754

>d1ldna2 d.162.1.1 (A:163-330) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: Lactate dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.95  E-value=1.2e-28  Score=211.97  Aligned_cols=154  Identities=18%  Similarity=0.352  Sum_probs=134.9

Q ss_pred             ccchHHHHHHHHHHHhCCCCCCCcceEEeecCCccccccccccCCCC----C-------CChHHHHHHHHHHhcchhHHH
Q 018512          188 TMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPC----S-------FTQEETEYLTNRIQNGGTEVV  256 (354)
Q Consensus       188 t~ld~~r~~~~la~~l~v~~~~v~~~v~G~hg~~~~vp~~s~~~v~~----~-------~~~~~~~~i~~~v~~~~~~i~  256 (354)
                      |.||++||++++|+++|+++++|+++|||+||+ +++|+||++++++    .       ......+++.+.++..+.++.
T Consensus         1 T~LDs~R~~~~lA~~l~v~~~~V~~~ViG~Hg~-~~vp~~s~~~v~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~v~   79 (168)
T d1ldna2           1 TILDTARFRFLLGEYFSVAPQNVHAYIIGEHGD-TELPVWSQAYIGVMPIRKLVESKGEEAQKDLERIFVNVRDAAYQII   79 (168)
T ss_dssp             THHHHHHHHHHHHHHHTSCGGGEEEEEEBCSST-TCEEEEEEEEETTEESTTTSGGGTTTHHHHHHHHHHHHHHHHHHHH
T ss_pred             CccHHHHHHHHHHHHhCcCHHHeEEEEEcCCCC-ccccchhhcccCCcchhhhhhhhhhhhccchhhhhhhhhhhHHHHH
Confidence            679999999999999999999999999999999 9999999998743    1       112235678888888888887


Q ss_pred             hhhccCCcchhhHHHHHHHHHHHHHhccCCCCcEEEee-eeeccC-CCccEEEEeEEEcCCCeEEeccCCCCCHHHHHHH
Q 018512          257 EAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECA-FVASQV-TELPFFASKVRLGRQGAEEIFQLGPLNEYERIGL  334 (354)
Q Consensus       257 ~~~~~kg~~~~s~A~a~~~ii~si~~~~~~~~~v~~~~-~~~g~~-~~~~~~svPv~ig~~Gv~~i~~~~~L~~~E~~~l  334 (354)
                      ..   ++++.|+++.++.+++.+++.+.+   .+++++ +++++| ++++|||+||+||++|+.+++++ +|+++|+++|
T Consensus        80 ~~---~~~s~~~~a~~~~~~~~~~~~~~~---~~~~~~~~~~~~yg~~~v~~s~Pv~lg~~Gv~~v~~l-~Ls~~E~~~L  152 (168)
T d1ldna2          80 EK---KGATYYGIAMGLARVTRAILHNEN---AILTVSAYLDGLYGERDVYIGVPAVINRNGIREVIEI-ELNDDEKNRF  152 (168)
T ss_dssp             HH---HSCCCHHHHHHHHHHHHHHHTTCC---EEEEEEEEEESTTSCEEEEEEEEEEEETTEEEEECCC-CCCHHHHHHH
T ss_pred             Hh---hccccchHHHHHhhHHHhhhcccc---eeeeeeeeeccccCCCCeeecceEEEcCCeEEEEeCC-CCCHHHHHHH
Confidence            74   578999999999999999998865   377776 568888 78999999999999999999996 9999999999


Q ss_pred             HHHHHHHHHHHHHhh
Q 018512          335 EKAKKELAGSIQKGI  349 (354)
Q Consensus       335 ~~sa~~i~~~~~~~~  349 (354)
                      ++|++.|++.+++|+
T Consensus       153 ~~s~~~lk~~i~~a~  167 (168)
T d1ldna2         153 HHSAATLKSVLARAF  167 (168)
T ss_dssp             HHHHHHHHHHHHHSC
T ss_pred             HHHHHHHHHHHHHHc
Confidence            999999999999876

>d1hyha2 d.162.1.1 (A:167-329) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]}

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH
species: Lactobacillus confusus [TaxId: 1583]

Probab=99.95  E-value=2e-28  Score=209.74  Aligned_cols=154  Identities=19%  Similarity=0.255  Sum_probs=133.3

Q ss_pred             ccchHHHHHHHHHHHhCCCCCCCcceEEeecCCccccccccccCCCC-C----CC--hHHHHHHHHHHhcchhHHHhhhc
Q 018512          188 TMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPC-S----FT--QEETEYLTNRIQNGGTEVVEAKA  260 (354)
Q Consensus       188 t~ld~~r~~~~la~~l~v~~~~v~~~v~G~hg~~~~vp~~s~~~v~~-~----~~--~~~~~~i~~~v~~~~~~i~~~~~  260 (354)
                      |.||++||++++|+++|++|++|+++|||+||+ ++||+||++++++ +    +.  +.+++++.++++++++++++.  
T Consensus         2 T~LDs~R~~~~lA~~l~v~~~~V~~~ViG~Hg~-~~vp~~s~~~v~g~~~~~~~~~~~~~~~~i~~~v~~~~~~i~~~--   78 (163)
T d1hyha2           2 TLLDTARMQRAVGEAFDLDPRSVSGYNLGEHGN-SQFVAWSTVRVMGQPIVTLADAGDIDLAAIEEEARKGGFTVLNG--   78 (163)
T ss_dssp             THHHHHHHHHHHHHHHTCCGGGCBCCEEBCTTT-TCEECTTTCEETTEEGGGC-----CCHHHHHHHHHHHHHHHHHH--
T ss_pred             CchHHHHHHHHHHHHhCcCHHHeEEEEEcCCCC-cCccceeccccCCchHHHHhccccchHHHHHHHHhhhHHHHHHH--
Confidence            679999999999999999999999999999999 9999999998753 1    12  224679999999999999884  


Q ss_pred             cCCcchhhHHHHHHHHHHHHHhccCCCCcEEEeeeeeccCCCccEEEEeEEEcCCCeEEeccCCCCCHHHHHHHHHHHHH
Q 018512          261 GAGSATLSMAYAAVKFADACLRGLRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKE  340 (354)
Q Consensus       261 ~kg~~~~s~A~a~~~ii~si~~~~~~~~~v~~~~~~~g~~~~~~~~svPv~ig~~Gv~~i~~~~~L~~~E~~~l~~sa~~  340 (354)
                       ||++.|++|.++..+++++..+.+   .+++++...+  ++++|||+||+||++|+++++++ +|+++|+++|++|++.
T Consensus        79 -kg~~~~~~a~~~~~~~~~~~~~~~---~~~~~s~~~~--~~~~~~s~Pv~ig~~Gv~~v~~l-~Ls~~E~~~l~~s~~~  151 (163)
T d1hyha2          79 -KGYTSYGVATSAIRIAKAVMADAH---AELVVSNRRD--DMGMYLSYPAIIGRDGVLAETTL-DLTTDEQEKLLQSRDY  151 (163)
T ss_dssp             -HSSCCHHHHHHHHHHHHHHHTTCC---EEEEEEEECT--TTCSEEEEEEEEETTEEEEECCC-CCCHHHHHHHHHHHHH
T ss_pred             -HHhHHHhHHHHhhHHHHHhcCCcc---ceeeeceecC--CcceEEEeEEEEcCCeEEEEecC-CCCHHHHHHHHHHHHH
Confidence             589999999999999999999875   3555553211  45799999999999999999996 9999999999999999


Q ss_pred             HHHHHHHhhhh
Q 018512          341 LAGSIQKGISF  351 (354)
Q Consensus       341 i~~~~~~~~~~  351 (354)
                      |++.++.+++.
T Consensus       152 l~~~~~~~~~~  162 (163)
T d1hyha2         152 IQQRFDEIVDT  162 (163)
T ss_dssp             HHHHHHHHHTT
T ss_pred             HHHHHHHHHhh
Confidence            99999998874

>d1i0za2 d.162.1.1 (A:161-332) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: Lactate dehydrogenase
species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]

Probab=99.95  E-value=1.3e-28  Score=212.59  Aligned_cols=152  Identities=18%  Similarity=0.255  Sum_probs=133.8

Q ss_pred             ccchHHHHHHHHHHHhCCCCCCCcceEEeecCCccccccccccCCCC------------CCChHHHHHHHHHHhcchhHH
Q 018512          188 TMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPC------------SFTQEETEYLTNRIQNGGTEV  255 (354)
Q Consensus       188 t~ld~~r~~~~la~~l~v~~~~v~~~v~G~hg~~~~vp~~s~~~v~~------------~~~~~~~~~i~~~v~~~~~~i  255 (354)
                      |.||++||++++|+++|+++++|+++|||+||+ +++|+||+++++.            ......++++.+.++..+.++
T Consensus         3 T~LDs~R~~~~lA~~lgv~~~~V~~~ViG~Hg~-~~vp~~s~~~v~g~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~   81 (172)
T d1i0za2           3 CNLDSARFRYLMAEKLGIHPSSCHGWILGEHGD-SSVAVWSGVNVAGVSLQELNPEMGTDNDSENWKEVHKMVVESAYEV   81 (172)
T ss_dssp             THHHHHHHHHHHHHHHTSCGGGCBCCEEBCSST-TCEECGGGCEETTEEHHHHCTTTTSSSCSSCTHHHHHHHHHHHHHH
T ss_pred             ChHHHHHHHHHHHHHhCcCHHHceEEEEccCCC-cccccHhhceeCCeeHHHhhhhhccchhHHHHHHHHHHhccceEEe
Confidence            689999999999999999999999999999999 9999999998742            122334678888899999998


Q ss_pred             HhhhccCCcchhhHHHHHHHHHHHHHhccCCCCcEEEee-eeeccC--CCccEEEEeEEEcCCCeEEeccCCCCCHHHHH
Q 018512          256 VEAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECA-FVASQV--TELPFFASKVRLGRQGAEEIFQLGPLNEYERI  332 (354)
Q Consensus       256 ~~~~~~kg~~~~s~A~a~~~ii~si~~~~~~~~~v~~~~-~~~g~~--~~~~~~svPv~ig~~Gv~~i~~~~~L~~~E~~  332 (354)
                      +..   ++++.|++|.++++++++++.+.+   .++|++ +++|+|  ++++|||+||++|++|+.++.++ +|+++|++
T Consensus        82 ~~~---~~~s~~a~a~~~~~~~~~~~~~~~---~v~~~~~~~~g~YGi~~~i~~s~Pv~lg~~Gv~~v~~l-~L~~~E~~  154 (172)
T d1i0za2          82 IKL---KGYTNWAIGLSVADLIESMLKNLS---RIHPVSTMVKGMYGIENEVFLSLPCILNARGLTSVINQ-KLKDDEVA  154 (172)
T ss_dssp             HHH---HSSCCHHHHHHHHHHHHHHHTTCC---EEEEEEEECTTSTTCCSCCEEEEEEEEETTEEEEECCC-CCCHHHHH
T ss_pred             eec---ccccchHHHHHHHHHHHHHhcCCC---cccccceeccCcCCCcCCEEEEEEEEecCCcEEEEeCC-CCCHHHHH
Confidence            884   578999999999999999998865   488887 569999  56899999999999999999996 99999999


Q ss_pred             HHHHHHHHHHHHHHH
Q 018512          333 GLEKAKKELAGSIQK  347 (354)
Q Consensus       333 ~l~~sa~~i~~~~~~  347 (354)
                      +|++|++.|++..+.
T Consensus       155 ~l~~Sa~~l~~~~~~  169 (172)
T d1i0za2         155 QLKKSADTLWDIQKD  169 (172)
T ss_dssp             HHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHH
Confidence            999999999876543

>d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=99.95  E-value=2.4e-28  Score=207.48  Aligned_cols=143  Identities=26%  Similarity=0.460  Sum_probs=118.8

Q ss_pred             CCCCeEEEEcCCCchHHHHHHHHHhCCCCcE-----EEEEecCC----chhHHHHHhcCCCCCeEEEEeCCCcHHhhhCC
Q 018512           40 AAGFKVAILGAAGGIGQPLAMLMKINPLVSV-----LHLYDVVN----TPGVTADISHMDTGAVVRGFLGQPQLENALTG  110 (354)
Q Consensus        40 ~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~e-----i~L~D~~~----~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~  110 (354)
                      ++||||+||||+|+||+++++.|+.++++++     +.|+|.+.    ..+.++|+.++.. +.++.+..+++.+++++|
T Consensus         2 ~~p~KV~IiGA~G~VG~~~a~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~   80 (154)
T d1y7ta1           2 KAPVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAF-PLLAGLEATDDPKVAFKD   80 (154)
T ss_dssp             CCCEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTC-TTEEEEEEESCHHHHTTT
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHhccccccccchhHhHhccccchhhHcCchhhhhcccc-ccccccccCCchhhhccc
Confidence            3678999999889999999999999887543     55666654    4567788888764 333332233455799999


Q ss_pred             CcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCC-CeEEEEecCCCCCchHHHHHHHHHhCCCCCCCEEE
Q 018512          111 MDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCP-NATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLG  186 (354)
Q Consensus       111 aDvVIi~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p-~a~viv~tNPv~~~~~~~~~~~~~~~~~p~~kviG  186 (354)
                      ||+||+++|.++++|++|.|++..|+++++++++.+.+++| +++|+++|||+|++++++   +++++|||++|||.
T Consensus        81 advViitaG~~~~pg~~r~dl~~~N~~i~~~~~~~i~k~a~~~~~vivvsNPvDv~t~~a---~k~asg~p~~rvia  154 (154)
T d1y7ta1          81 ADYALLVGAAPRKAGMERRDLLQVNGKIFTEQGRALAEVAKKDVKVLVVGNPANTNALIA---YKNAPGLNPRNFTA  154 (154)
T ss_dssp             CSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHHHHHH---HHTCTTSCGGGEEE
T ss_pred             ccEEEeecCcCCCCCCcHHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEecCcHHHHHHHH---HHHcCCCcHHhccC
Confidence            99999999999999999999999999999999999999995 899999999999999875   34569999999984

>d1ldma2 d.162.1.1 (A:161-329) Lactate dehydrogenase {Dogfish (Squalus acanthias) [TaxId: 7797]}

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: Lactate dehydrogenase
species: Dogfish (Squalus acanthias) [TaxId: 7797]

Probab=99.95  E-value=3.3e-28  Score=209.39  Aligned_cols=155  Identities=20%  Similarity=0.299  Sum_probs=129.6

Q ss_pred             ccchHHHHHHHHHHHhCCCCCCCcceEEeecCCccccccccccCCCC-C--------CChHHHHHHHHHHhcchhHHHhh
Q 018512          188 TMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPC-S--------FTQEETEYLTNRIQNGGTEVVEA  258 (354)
Q Consensus       188 t~ld~~r~~~~la~~l~v~~~~v~~~v~G~hg~~~~vp~~s~~~v~~-~--------~~~~~~~~i~~~v~~~~~~i~~~  258 (354)
                      |.||++||++++|+++|+++++|+++|||+||+ +++|+||.+.+.. +        .....+.++..+++..+.++.. 
T Consensus         3 T~LDs~R~~~~lA~~l~v~~~~V~~~ViG~Hg~-~~v~~~s~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-   80 (169)
T d1ldma2           3 CNLDSARFRYLMGERLGVHSCSCHGWVIGEHGD-SVPSVWSGMNVASIKLHPLDGTNKDKQDWKKLHKDVVDSAYEVIK-   80 (169)
T ss_dssp             THHHHHHHHHHHHHHHTSCGGGCBCCBCBCSST-TCCBCGGGCEETTEESHHHHSSTTTTTTTTHHHHHHHHHHHHHHH-
T ss_pred             chHHHHHHHHHHHHHHCcCHHHeEEEEEcCCCc-cchhhhhhcccCCcchHHhhcccchhhhcceeEEEecCceEEEec-
Confidence            689999999999999999999999999999999 9999999998743 1        1122234555556666666665 


Q ss_pred             hccCCcchhhHHHHHHHHHHHHHhccCCCCcEEEee-eeeccC--CCccEEEEeEEEcCCCeEEeccCCCCCHHHHHHHH
Q 018512          259 KAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECA-FVASQV--TELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLE  335 (354)
Q Consensus       259 ~~~kg~~~~s~A~a~~~ii~si~~~~~~~~~v~~~~-~~~g~~--~~~~~~svPv~ig~~Gv~~i~~~~~L~~~E~~~l~  335 (354)
                        +++++.|++|.++++++++++.+.+   .+++++ +++|+|  ++++|||+||++|++|+++++++ +|+++|+++|+
T Consensus        81 --~~~s~~~a~a~~~~~~~~~~~~~~~---~~~~~~~~~~g~ygi~~~i~~s~Pv~lg~~Gv~~v~~l-~L~~~E~~~l~  154 (169)
T d1ldma2          81 --LKGYTSWAIGLSVADLAETIMKNLC---RVHPVSTMVKDFYGIKDNVFLSLPCVLNDHGISNIVKM-KLKPNEEQQLQ  154 (169)
T ss_dssp             --HHSSCCHHHHHHHHHHHHHHHTTCC---EEEEEEEECTTSTTCCSCCEEEEEEEEETTEEEEECCC-CCCHHHHHHHH
T ss_pred             --cccchhhHHHHHHhhhhheecCCCC---ceeeeeeecccccCCcCCceEEeeEEEcCCcEEEEecC-CCCHHHHHHHH
Confidence              4578999999999999999999875   478886 569998  57899999999999999999996 99999999999


Q ss_pred             HHHHHHHHHHHHhhhh
Q 018512          336 KAKKELAGSIQKGISF  351 (354)
Q Consensus       336 ~sa~~i~~~~~~~~~~  351 (354)
                      +|++.|+ ++.+.++|
T Consensus       155 ~s~~~l~-~~~k~lkf  169 (169)
T d1ldma2         155 KSATTLW-DIQKDLKF  169 (169)
T ss_dssp             HHHHHHH-HHHHTCCC
T ss_pred             HHHHHHH-HHHHhcCC
Confidence            9999998 55555554

>d1llca2 d.162.1.1 (A:165-334) Lactate dehydrogenase {Lactobacillus casei [TaxId: 1582]}

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: Lactate dehydrogenase
species: Lactobacillus casei [TaxId: 1582]

Probab=99.95  E-value=1e-29  Score=219.74  Aligned_cols=158  Identities=19%  Similarity=0.354  Sum_probs=137.7

Q ss_pred             ccchHHHHHHHHHHHhCCCCCCCcceEEeecCCccccccccccCCCC-C----------CChHHHHHHHHHHhcchhHHH
Q 018512          188 TMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPC-S----------FTQEETEYLTNRIQNGGTEVV  256 (354)
Q Consensus       188 t~ld~~r~~~~la~~l~v~~~~v~~~v~G~hg~~~~vp~~s~~~v~~-~----------~~~~~~~~i~~~v~~~~~~i~  256 (354)
                      |.||++||++++|+++|+++++|+++|||+||+ +++|+||++.+.+ +          +....++++.+++++++++++
T Consensus         1 T~LDs~R~~~~lA~~l~v~~~~V~~~ViG~Hg~-~~vp~~s~~~i~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~   79 (172)
T d1llca2           1 TSLDTARFRQSIAEMVNVDARSVHAYIMGEHGD-TEFPVWSHANIGGVTIAEWVKAHPEIKEDKLVKMFEDVRDAAYEII   79 (172)
T ss_dssp             THHHHHHHHHHHHHHSCCCTTSCEEEEEBSSSS-SCEEEEEEEESTTCCSSSSSSCSCSSSSSSSSTTTTTTGGGTTTTS
T ss_pred             CchHHHHHHHHHHHHhCcCHHHeEEEEEcCCCC-cceeeeeccccCCccHHHHHhhhhccchhHHHHHHHhhcchHHHHH
Confidence            679999999999999999999999999999999 9999999988642 1          122234667777888888988


Q ss_pred             hhhccCCcchhhHHHHHHHHHHHHHhccCCCCcEEEee-eeeccC-CCccEEEEeEEEcCCCeEEeccCCCCCHHHHHHH
Q 018512          257 EAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECA-FVASQV-TELPFFASKVRLGRQGAEEIFQLGPLNEYERIGL  334 (354)
Q Consensus       257 ~~~~~kg~~~~s~A~a~~~ii~si~~~~~~~~~v~~~~-~~~g~~-~~~~~~svPv~ig~~Gv~~i~~~~~L~~~E~~~l  334 (354)
                      +   ++|++.|++|.++++++++++.+.+.   +++++ +++|+| .+++|||+||++|++|+++++++ +|+++|+++|
T Consensus        80 ~---~kg~~~~a~a~~~~~~~~~~~~~~~~---~~~~~~~~~g~ygi~~~~~s~P~~lg~~Gv~~i~~l-~L~~~E~~~l  152 (172)
T d1llca2          80 K---LKGATFYGIATALARISKAILNDENA---VLPLSVYMDGQYGINDLYIGTPAVINRNGIQNILEI-PLTDHEEESM  152 (172)
T ss_dssp             S---SSSCTTHHHHHHHHHHHHHHHHTCCC---CEECCCCCSSSSSCCSSCCBCEEEEETTEEEEECCC-CCTTHHHHHH
T ss_pred             H---hhhhhhhhhHHHHHHHHHHHhcCCCC---ccceeeeecCccCcccceEEEEEEEcCCceEEEecC-CCCHHHHHHH
Confidence            7   57899999999999999999999763   67776 679999 67899999999999999999995 9999999999


Q ss_pred             HHHHHHHHHHHHHhhhhhc
Q 018512          335 EKAKKELAGSIQKGISFSK  353 (354)
Q Consensus       335 ~~sa~~i~~~~~~~~~~~~  353 (354)
                      ++|+++|++.++++++-++
T Consensus       153 ~~s~~~lk~~i~~~~~~~~  171 (172)
T d1llca2         153 QKSASQLKKVLTDAFAKND  171 (172)
T ss_dssp             HTTTTTTTTTTTTTCCCCC
T ss_pred             HHHHHHHHHHHHHHHHhhc
Confidence            9999999999988877543

>d2ldxa2 d.162.1.1 (A:160-331) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: Lactate dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.94  E-value=4.2e-27  Score=202.81  Aligned_cols=153  Identities=22%  Similarity=0.346  Sum_probs=129.9

Q ss_pred             ccchHHHHHHHHHHHhCCCCCCCcceEEeecCCccccccccccCCCC-C-----------CChHHHHHHHHHHhcchhHH
Q 018512          188 TMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPC-S-----------FTQEETEYLTNRIQNGGTEV  255 (354)
Q Consensus       188 t~ld~~r~~~~la~~l~v~~~~v~~~v~G~hg~~~~vp~~s~~~v~~-~-----------~~~~~~~~i~~~v~~~~~~i  255 (354)
                      |.||+.||++++|+++|++|++|+++|||+||+ +++|+||++.++. +           ......+.+....+..+..+
T Consensus         3 T~LD~~R~~~~vA~~l~v~~~~V~~~ViG~Hs~-~~ip~~s~~~v~g~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~   81 (172)
T d2ldxa2           3 CNLDSARFRYLIGEKLGVNPTSCHGWVLGEHGD-SSVPIWSGVNVAGVTLKSLNPAIGTDKNKQHWKNVHKQVVEGGYEV   81 (172)
T ss_dssp             THHHHHHHHHHHHHHHTCCTTSSCCCEEECSSS-CEEECGGGCBSSCSSSSBSTTTCSCSSSSSSCHHHHHHHHHHHHHH
T ss_pred             chHHHHHHHHHHHHHhCcCHHHcEEEEEcCCCC-ccccceecceecCcchhhHHHHhhhhhhhhhhhhhhhhhccceeeh
Confidence            689999999999999999999999999999999 9999999998742 1           11123456777777777777


Q ss_pred             HhhhccCCcchhhHHHHHHHHHHHHHhccCCCCcEEEee-eeeccC--CCccEEEEeEEEcCCCeEEeccCCCCCHHHHH
Q 018512          256 VEAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECA-FVASQV--TELPFFASKVRLGRQGAEEIFQLGPLNEYERI  332 (354)
Q Consensus       256 ~~~~~~kg~~~~s~A~a~~~ii~si~~~~~~~~~v~~~~-~~~g~~--~~~~~~svPv~ig~~Gv~~i~~~~~L~~~E~~  332 (354)
                      +..   ++++.|++|.+++.++.+++.+.+   .+++++ +++|+|  ++++|||+||+||++|+++++++ +|+++|++
T Consensus        82 ~~~---k~~s~~~~a~~~~~~~~~~~~~~~---~~~~~~~~~~g~ygi~~~i~~s~Pv~ig~~Gv~~v~~l-~L~~~E~~  154 (172)
T d2ldxa2          82 LDM---KGYTSWAIGLSVTDLARSILKNLK---RVHPVTTLVKGFHGIKEEVFLSIPCVLGESGITDFVKV-NMTAEEEG  154 (172)
T ss_dssp             HHH---HSSCCHHHHHHHHHHHHHHHTTCC---EEEEEEEECTTSTTCCSSCEEEEEEEEETTEEEEEECC-CCCHHHHH
T ss_pred             hhc---ccchhHHHHHHHhHHHHhhcCCCc---cceeeeeecccccCCcCCeEEEEEEEEcCCCEEEEecC-CCCHHHHH
Confidence            773   578999999999999999998865   377776 568998  57999999999999999999996 99999999


Q ss_pred             HHHHHHHHHHHHHHHhh
Q 018512          333 GLEKAKKELAGSIQKGI  349 (354)
Q Consensus       333 ~l~~sa~~i~~~~~~~~  349 (354)
                      +|++|++.|++. .+.+
T Consensus       155 ~l~~s~~~lk~~-~k~l  170 (172)
T d2ldxa2         155 LLKKSADTLWNM-QKNL  170 (172)
T ss_dssp             HHHHHHHHHHHH-TSCS
T ss_pred             HHHHHHHHHHHH-HHhc
Confidence            999999999854 4433

>d1y7ta2 d.162.1.1 (A:154-332) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: Malate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=99.94  E-value=2.5e-26  Score=198.43  Aligned_cols=158  Identities=21%  Similarity=0.218  Sum_probs=126.2

Q ss_pred             eccchHHHHHHHHHHHhCCCCCCCcce-EEeecCCccccccccccCCCC----CC-ChH-HHHHHHHHHhcchhHHHhhh
Q 018512          187 VTMLDVVRANTFVAEVLGLDPRDVDVP-VVGGHAGVTILPLLSQVKPPC----SF-TQE-ETEYLTNRIQNGGTEVVEAK  259 (354)
Q Consensus       187 ~t~ld~~r~~~~la~~l~v~~~~v~~~-v~G~hg~~~~vp~~s~~~v~~----~~-~~~-~~~~i~~~v~~~~~~i~~~~  259 (354)
                      +|.||++||++++|+++||+|++|+++ |||+||+ +++|+||++++.+    .+ .+. ...+..++....+..++.. 
T Consensus         1 ~T~LDs~R~r~~lA~~l~v~~~~V~~~iI~GeHG~-s~vp~~S~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-   78 (173)
T d1y7ta2           1 MTRLDHNRAKAQLAKKTGTGVDRIRRMTVWGNHSS-TMFPDLFHAEVDGRPALELVDMEWYEKVFIPTVAQRGAAIIQA-   78 (173)
T ss_dssp             CCHHHHHHHHHHHHHHHTCCGGGEECCEEEBCSST-TCEEECSSCEETTEEGGGTSCHHHHHHTHHHHHHHHHHHHHHH-
T ss_pred             CChhHHHHHHHHHHHHHCcCHHHcEEEEEEEecCc-cEEeeeeeeeEcCccHHHhcccccccchhhhhhhhhHHHHHHH-
Confidence            478999999999999999999999875 6799999 9999999999753    12 222 2233444444445555554 


Q ss_pred             ccCCcchhhHHHHHHHHHHHHHhccCCCCcEEEee-eeeccC--CCccEEEEeEEEcCCCeEEeccCCCCCHHHHHHHHH
Q 018512          260 AGAGSATLSMAYAAVKFADACLRGLRGDAGVVECA-FVASQV--TELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEK  336 (354)
Q Consensus       260 ~~kg~~~~s~A~a~~~ii~si~~~~~~~~~v~~~~-~~~g~~--~~~~~~svPv~ig~~Gv~~i~~~~~L~~~E~~~l~~  336 (354)
                       .++++.|++|.+++.++++++.+.++. .++|++ +++|+|  ++++++|+||+++++|++.+.++ +||++|+++|++
T Consensus        79 -~~~~s~~~~a~a~~~~~~~~~~~~~~~-~~~~~~v~~~g~YGi~~~~~~s~Pvi~~~gg~~~v~~l-~L~~~E~~~l~~  155 (173)
T d1y7ta2          79 -RGASSAASAANAAIEHIRDWALGTPEG-DWVSMAVPSQGEYGIPEGIVYSFPVTAKDGAYRVVEGL-EINEFARKRMEI  155 (173)
T ss_dssp             -HSSCCHHHHHHHHHHHHHHHHTBCCTT-CCEEEEEECSSGGGCCTTSEEEEEEEEETTEEEECCCC-CCCHHHHHHHHH
T ss_pred             -hccCchhhHHHHHHHHHHHHhcccCCC-CceeeEEEeccccCCccceeEeeeEEEeCCeEEEecCC-CCCHHHHHHHHH
Confidence             367889999999999999999986644 488887 569998  68999999999876666555565 999999999999


Q ss_pred             HHHHHHHHHHHhh
Q 018512          337 AKKELAGSIQKGI  349 (354)
Q Consensus       337 sa~~i~~~~~~~~  349 (354)
                      |+++|++.++.+.
T Consensus       156 s~~~L~~~~e~vk  168 (173)
T d1y7ta2         156 TAQELLDEMEQVK  168 (173)
T ss_dssp             HHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHH
Confidence            9999999998553

>d1b8pa2 d.162.1.1 (A:159-329) Malate dehydrogenase {Aquaspirillum arcticum [TaxId: 87645]}

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: Malate dehydrogenase
species: Aquaspirillum arcticum [TaxId: 87645]

Probab=99.93  E-value=2e-25  Score=192.25  Aligned_cols=157  Identities=17%  Similarity=0.164  Sum_probs=119.4

Q ss_pred             cchHHHHHHHHHHHhCCCCCCCcc-eEEeecCCccccccccccCCCCC-----CChH--HHHHHHHHHhcchhHHHhhhc
Q 018512          189 MLDVVRANTFVAEVLGLDPRDVDV-PVVGGHAGVTILPLLSQVKPPCS-----FTQE--ETEYLTNRIQNGGTEVVEAKA  260 (354)
Q Consensus       189 ~ld~~r~~~~la~~l~v~~~~v~~-~v~G~hg~~~~vp~~s~~~v~~~-----~~~~--~~~~i~~~v~~~~~~i~~~~~  260 (354)
                      .||++||++++|+++|++|++|+. +|||+||+ +++|+||.+++...     ..+.  ..+++...++.++..+...+ 
T Consensus         2 ~LD~~R~r~~lA~kl~v~~~~V~~~iI~GehG~-s~vp~~S~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-   79 (171)
T d1b8pa2           2 RLDHNRALSQIAAKTGKPVSSIEKLFVWGNHSP-TMYADYRYAQIDGASVKDMINDDAWNRDTFLPTVGKRGAAIIDAR-   79 (171)
T ss_dssp             HHHHHHHHHHHHHHHTCCGGGEESCEEEBCSST-TCEEECSSCEETTEEHHHHHCCHHHHHHTHHHHHHTHHHHHHHHH-
T ss_pred             cchHHHHHHHHHHHHCcCHHHeEEEEEEEcCCC-cEEeeeecceeecccchhhhhhhcchhhhHHHHHHHHHHHHHHHH-
Confidence            489999999999999999999975 78899999 99999999998531     1111  22455555666666666644 


Q ss_pred             cCCcchhhHHHHHHHHHHHHHhccCCCCcEEEee-eeeccC--CCccEEEEeEEEcCCCeEEeccCCCCCHHHHHHHHHH
Q 018512          261 GAGSATLSMAYAAVKFADACLRGLRGDAGVVECA-FVASQV--TELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKA  337 (354)
Q Consensus       261 ~kg~~~~s~A~a~~~ii~si~~~~~~~~~v~~~~-~~~g~~--~~~~~~svPv~ig~~Gv~~i~~~~~L~~~E~~~l~~s  337 (354)
                      +++++.++.+.++..+...+. +..+  .+++++ +++|+|  ++++|||+||++|++|++.+.++ +|+++|+++|++|
T Consensus        80 ~~~~~~~~~~a~~~~~~~~i~-~~~~--~~~~~s~~~~g~yg~~~gi~fS~Pv~ig~~gve~v~~l-~L~~~e~~~l~~s  155 (171)
T d1b8pa2          80 GVSSAASAANAAIDHIHDWVL-GTAG--KWTTMGIPSDGSYGIPEGVIFGFPVTTENGEYKIVQGL-SIDAFSQERINVT  155 (171)
T ss_dssp             SSCCHHHHHHHHHHHHHHHHH-CCTT--CCEEEEEECCSGGGCCTTCEEEEEEEEETTEEEECCCC-CCCHHHHHHHHHH
T ss_pred             hhhhhhhhhHHHHHHHHHHHh-CCCc--cceeEEEEeccccccccceEEEEEEEEeCCeEEEEeCC-CCCHHHHHHHHHH
Confidence            444444454444444444444 4332  377887 569998  68999999999999999999886 9999999999999


Q ss_pred             HHHHHHHHHHhhhh
Q 018512          338 KKELAGSIQKGISF  351 (354)
Q Consensus       338 a~~i~~~~~~~~~~  351 (354)
                      +++|+++++.+..+
T Consensus       156 ~~~L~~e~~~v~~l  169 (171)
T d1b8pa2         156 LNELLEEQNGVQHL  169 (171)
T ss_dssp             HHHHHHHHHHHGGG
T ss_pred             HHHHHHHHHHHHHh
Confidence            99999998876654

>d1s6ya1 c.2.1.5 (A:4-172) 6-phospho-beta-glucosidase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: 6-phospho-beta-glucosidase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.92  E-value=1.2e-25  Score=193.41  Aligned_cols=139  Identities=19%  Similarity=0.200  Sum_probs=108.2

Q ss_pred             CCeEEEEcCCCchHHHH--HHHHHhCCC--CcEEEEEecCC--chhHHHHHhcCC----CCCeEEEEeCCCcHHhhhCCC
Q 018512           42 GFKVAILGAAGGIGQPL--AMLMKINPL--VSVLHLYDVVN--TPGVTADISHMD----TGAVVRGFLGQPQLENALTGM  111 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~--a~~l~~~~~--~~ei~L~D~~~--~~g~~~dl~~~~----~~~~v~~~~~~~d~~~al~~a  111 (354)
                      .|||+|||| |++|...  +..+.....  ..||+|+|+++  .++.++|+.+..    .....+.. .++|.+++++||
T Consensus         1 k~KI~iIGa-Gs~~~~~~~~~l~~~~~~~~~~eI~L~Di~e~~~~~~~~d~~~~~~~~~~~~~~~~~-~~td~~~al~ga   78 (169)
T d1s6ya1           1 RLKIATIGG-GSSYTPELVEGLIKRYHELPVGELWLVDIPEGKEKLEIVGALAKRMVEKAGVPIEIH-LTLDRRRALDGA   78 (169)
T ss_dssp             CEEEEEETT-TCTTHHHHHHHHHHTTTTCCEEEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCCEEE-EESCHHHHHTTC
T ss_pred             CcEEEEECC-ChhhHHHHHHHHHHhccccCCCEEEEEcCCccHHHHHHHHHHHHHHHHhcCCCceee-ecCCchhhcCCC
Confidence            379999999 9887654  444444332  46999999987  567778876531    12233332 246778999999


Q ss_pred             cEEEEcCCCCCCCCCCHHHH--------------------HHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCCchHHHHH
Q 018512          112 DLVIIPAGVPRKPGMTRDDL--------------------FNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAE  171 (354)
Q Consensus       112 DvVIi~ag~~~~~g~~r~d~--------------------~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~~  171 (354)
                      |+||++++.++++|++|+|+                    +.+|++++++++++|+++|||+|+|++|||+|++|+++  
T Consensus        79 DvVv~ta~~~~~~~~~r~~~i~~~~gi~~~~t~g~~~~~~~~~n~~i~~~i~~~i~~~~pda~~i~vtNPvdv~t~~~--  156 (169)
T d1s6ya1          79 DFVTTQFRVGGLEARAKDERIPLKYGVIGQETNGPGGLFKGLRTIPVILDIIRDMEELCPDAWLINFTNPAGMVTEAV--  156 (169)
T ss_dssp             SEEEECCCTTHHHHHHHHHHTGGGGTCCCCSSSTHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECSSSHHHHHHHH--
T ss_pred             CEEEEccccCCCCCeehhhhhhhhcCceeccccCcchhhhccccHHHHHHHHHHHhhcCCCeEEEEeCChHHHHHHHH--
Confidence            99999999987776666554                    57999999999999999999999999999999998654  


Q ss_pred             HHHHhCCCCCCCEEEec
Q 018512          172 VFKKAGTYDPKKLLGVT  188 (354)
Q Consensus       172 ~~~~~~~~p~~kviG~t  188 (354)
                        +|.  +|++||||+|
T Consensus       157 --~k~--~p~~kviGlC  169 (169)
T d1s6ya1         157 --LRY--TKQEKVVGLC  169 (169)
T ss_dssp             --HHH--CCCCCEEECC
T ss_pred             --HHH--CCCCCEEeeC
Confidence              676  5789999998

>d1u8xx1 c.2.1.5 (X:3-169) Maltose-6'-phosphate glucosidase GlvA {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Maltose-6'-phosphate glucosidase GlvA
species: Bacillus subtilis [TaxId: 1423]

Probab=99.90  E-value=7.3e-25  Score=187.81  Aligned_cols=138  Identities=19%  Similarity=0.201  Sum_probs=106.8

Q ss_pred             CCCeEEEEcCCCchHHHHHH-HHHh-CC--CCcEEEEEecCC--chhHHHHHhcCC--CCCeEEEEeCCCcHHhhhCCCc
Q 018512           41 AGFKVAILGAAGGIGQPLAM-LMKI-NP--LVSVLHLYDVVN--TPGVTADISHMD--TGAVVRGFLGQPQLENALTGMD  112 (354)
Q Consensus        41 ~~~kI~IiGa~G~vG~~~a~-~l~~-~~--~~~ei~L~D~~~--~~g~~~dl~~~~--~~~~v~~~~~~~d~~~al~~aD  112 (354)
                      +..||+|||| |++|+..+. .++. ..  ..+||+|+|+++  +++.+.++.+..  .....+.. .++|++++++|||
T Consensus         2 k~~KI~iIGa-Gsv~~~~~~~~ll~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~~~-~~~d~~eal~~AD   79 (167)
T d1u8xx1           2 KSFSIVIAGG-GSTFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIAGACDVFIREKAPDIEFA-ATTDPEEAFTDVD   79 (167)
T ss_dssp             CCEEEEEECT-TSSSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHHHHHHHHHHHHHHCTTSEEE-EESCHHHHHSSCS
T ss_pred             CCceEEEECC-ChhhhHHHHHHHHhhhhhcCCCEEEEEcCChhHHHHHHHHHHHHHHHhCCCcceE-ecCChhhccCCCC
Confidence            4579999999 999887543 3332 22  247999999998  555566666542  12222322 2457889999999


Q ss_pred             EEEEcCCCCCCCCCCHHHHH--------------------HHHHHHHHHHHHHHhhhCCCeEEEEecCCCCCchHHHHHH
Q 018512          113 LVIIPAGVPRKPGMTRDDLF--------------------NINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEV  172 (354)
Q Consensus       113 vVIi~ag~~~~~g~~r~d~~--------------------~~n~~~~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~~~  172 (354)
                      +||+++|.++++|++|++++                    .+|+++++++++.|+++||+||+|++|||+|++|+++   
T Consensus        80 ~Vvitag~~~~~g~~rd~~i~~~~Gi~~~~t~g~gg~~~~~r~i~ii~~i~~~i~~~~P~A~li~~TNPvdv~t~~~---  156 (167)
T d1u8xx1          80 FVMAHIRVGKYAMRALDEQIPLKYGVVGQETCGPGGIAYGMRSIGGVLEILDYMEKYSPDAWMLNYSNPAAIVAEAT---  156 (167)
T ss_dssp             EEEECCCTTHHHHHHHHHHHHHTTTCCCCSSSHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCSCHHHHHHHH---
T ss_pred             EEEECCCcCCCCceeHHHhhchhcCceeeccccCcchheehhhHHHHHHHHHHHHhhCCCeEEEEeCCHHHHHHHHH---
Confidence            99999999998888888765                    4679999999999999999999999999999998654   


Q ss_pred             HHHhCCCCCCCEEE
Q 018512          173 FKKAGTYDPKKLLG  186 (354)
Q Consensus       173 ~~~~~~~p~~kviG  186 (354)
                       +|.  +|++|||.
T Consensus       157 -~k~--~P~~rVI~  167 (167)
T d1u8xx1         157 -RRL--RPNSKILN  167 (167)
T ss_dssp             -HHH--STTCCEEE
T ss_pred             -HHH--CCcccccC
Confidence             666  59999984

>d1up7a1 c.2.1.5 (A:1-162) 6-phospho-beta-glucosidase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: 6-phospho-beta-glucosidase
species: Thermotoga maritima [TaxId: 2336]

Probab=99.89  E-value=3.3e-25  Score=189.49  Aligned_cols=137  Identities=16%  Similarity=0.225  Sum_probs=101.8

Q ss_pred             CeEEEEcCCCchHHHHHHHHHh--C--CCCcEEEEEecCC-chhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEc
Q 018512           43 FKVAILGAAGGIGQPLAMLMKI--N--PLVSVLHLYDVVN-TPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIP  117 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~--~--~~~~ei~L~D~~~-~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~  117 (354)
                      |||+|||| |++|.+.+...+.  .  ...+||+|+|+++ ..+.+.|+.+........... +++.+++++|||+||++
T Consensus         1 mKIaiIGa-Gs~g~~~~~~~l~~~~~~~~~~el~L~Did~~k~~~~~d~~~~~~~~~~~~~~-t~~~~~~l~~aDvVVit   78 (162)
T d1up7a1           1 MRIAVIGG-GSSYTPELVKGLLDISEDVRIDEVIFYDIDEEKQKIVVDFVKRLVKDRFKVLI-SDTFEGAVVDAKYVIFQ   78 (162)
T ss_dssp             CEEEEETT-TCTTHHHHHHHHHHHTTTSCCCEEEEECSCHHHHHHHHHHHHHHHTTSSEEEE-CSSHHHHHTTCSEEEEC
T ss_pred             CEEEEECC-CHHHHHHHHHHHHhcccccCccEEEEEecCcHHHHHHHHHHHhhhccCceEEE-ecCcccccCCCCEEEEe
Confidence            79999999 9999988764332  2  2357999999987 333456666543222222222 35668999999999999


Q ss_pred             CCCCCCCCCCHHHH--------------------HHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCCchHHHHHHHHHhC
Q 018512          118 AGVPRKPGMTRDDL--------------------FNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAG  177 (354)
Q Consensus       118 ag~~~~~g~~r~d~--------------------~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~~~~~~~~  177 (354)
                      +|.+++++++|.+.                    ..++++.+.++.+ +.++||++|+|++|||+|++|++    +++. 
T Consensus        79 a~~~~~~~~~r~~~i~~~~~i~~~~~~g~~g~~~~~r~~~~~~~i~~-~~~~~p~a~~i~vtNPvdiit~~----~~~~-  152 (162)
T d1up7a1          79 FRPGGLKGRENDEGIPLKYGLIGQETTGVGGFSAALRAFPIVEEYVD-TVRKTSNATIVNFTNPSGHITEF----VRNY-  152 (162)
T ss_dssp             CCTTHHHHHHHHHHGGGGGTCCCCSSSTHHHHHHHHHHHHHHHHHHH-HHHHTTCCEEEECSSSHHHHHHH----HHHT-
T ss_pred             cccCCCCCcchHhhhhhhcCeeeeeccCcchhhhhhhhhHHHHHHhh-hhccCCCeEEEEeCCHHHHHHHH----HHHh-
Confidence            99987776666544                    4567778877765 77789999999999999999764    4776 


Q ss_pred             CCCCCCEEEec
Q 018512          178 TYDPKKLLGVT  188 (354)
Q Consensus       178 ~~p~~kviG~t  188 (354)
                       +|++|++|+|
T Consensus       153 -~p~~rviGlC  162 (162)
T d1up7a1         153 -LEYEKFIGLC  162 (162)
T ss_dssp             -TCCSSEEECC
T ss_pred             -CCCCCEEeeC
Confidence             4788999998

>d1obba1 c.2.1.5 (A:2-172) Alpha-glucosidase AglA {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Alpha-glucosidase AglA
species: Thermotoga maritima [TaxId: 2336]

Probab=99.88  E-value=2e-23  Score=179.69  Aligned_cols=137  Identities=20%  Similarity=0.183  Sum_probs=104.5

Q ss_pred             CCCeEEEEcCCCchHHHHHH--HHHhC-CC-CcEEEEEecCC--chhHHHHHhcCC--CCCeEEEEeCCCcHHhhhCCCc
Q 018512           41 AGFKVAILGAAGGIGQPLAM--LMKIN-PL-VSVLHLYDVVN--TPGVTADISHMD--TGAVVRGFLGQPQLENALTGMD  112 (354)
Q Consensus        41 ~~~kI~IiGa~G~vG~~~a~--~l~~~-~~-~~ei~L~D~~~--~~g~~~dl~~~~--~~~~v~~~~~~~d~~~al~~aD  112 (354)
                      |+|||+|||| |++|++.+.  .++.. .+ ..||+|+|+++  +++.+.|+.|..  .....+.. .++|++++++|||
T Consensus         1 p~mKI~iIGa-Gsvg~t~~~~~~l~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~i~-~~td~~eaL~dad   78 (171)
T d1obba1           1 PSVKIGIIGA-GSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDAILTIAKKYVEEVGADLKFE-KTMNLDDVIIDAD   78 (171)
T ss_dssp             CCCEEEEETT-TCHHHHHHHHHHHHTCGGGTTCEEEEECSCHHHHHHHHHHHHHHHHHTTCCCEEE-EESCHHHHHTTCS
T ss_pred             CCcEEEEECC-CHHHhHHHHHHHHHhccccCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCCeEEE-EeCChhhcccCCC
Confidence            5789999999 999988643  34433 22 46999999997  567777777742  12223332 2468899999999


Q ss_pred             EEEEcCCC------------------CCCCCCCHHHH--------HHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCCch
Q 018512          113 LVIIPAGV------------------PRKPGMTRDDL--------FNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTV  166 (354)
Q Consensus       113 vVIi~ag~------------------~~~~g~~r~d~--------~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv~~~~  166 (354)
                      +||++++.                  ++.++++|.|.        +.+|+++++++++.|+++||++|+|++|||+|++|
T Consensus        79 ~Vv~~~~~g~~~~~~~~~~i~~~~g~~~~~~~~~~~~~g~~~~~~~~rn~~i~~~i~~~i~~~~p~a~~i~~TNPvdv~t  158 (171)
T d1obba1          79 FVINTAMVGGHTYLEKVRQIGEKYGYYRGIDAQEFNMVSDYYTFSNYNQLKYFVDIARKIEKLSPKAWYLQAANPIFEGT  158 (171)
T ss_dssp             EEEECCCTTHHHHHHHHHHHHHHTTCTTCTTCBTTBCCTTCCSSSCHHHHHHHHHHHHHHHHHCTTCEEEECSSCHHHHH
T ss_pred             eEeeecccccccceeeehhcchhhhhccCCCccccCCCCCcceeeecchHHHHHHHHHHHHHHCcCeEEEEECChHHHHH
Confidence            99998654                  34455665553        57899999999999999999999999999999997


Q ss_pred             HHHHHHHHHhCCCCCCCEEE
Q 018512          167 PIAAEVFKKAGTYDPKKLLG  186 (354)
Q Consensus       167 ~~~~~~~~~~~~~p~~kviG  186 (354)
                      ++    +++++++   |+||
T Consensus       159 ~~----~~k~~~~---k~iG  171 (171)
T d1obba1         159 TL----VTRTVPI---KAVG  171 (171)
T ss_dssp             HH----HHHHSCS---EEEE
T ss_pred             HH----HHHhcCC---CccC
Confidence            65    4787764   8887

>d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Short chain L-3-hydroxyacyl CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.84  E-value=1.1e-08  Score=87.88  Aligned_cols=119  Identities=15%  Similarity=0.199  Sum_probs=82.8

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC-c--hhH--H----HHHhcCCC--------------CCeEEEEe
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN-T--PGV--T----ADISHMDT--------------GAVVRGFL   99 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~-~--~g~--~----~dl~~~~~--------------~~~v~~~~   99 (354)
                      .||+|||| |.+|+.+|..++..|+  +|+|+|+++ .  .+.  .    ..+.....              ...+..  
T Consensus         5 kkvaViGa-G~mG~~iA~~~a~~G~--~V~l~D~~~~~l~~a~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~l~~i~~--   79 (192)
T d1f0ya2           5 KHVTVIGG-GLMGAGIAQVAAATGH--TVVLVDQTEDILAKSKKGIEESLRKVAKKKFAENPKAGDEFVEKTLSTIAT--   79 (192)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTC--EEEEECSCHHHHHHHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHTEEE--
T ss_pred             EEEEEECc-CHHHHHHHHHHHhCCC--cEEEEECChHHHHHHHhhHHHHHHHHHHhhhhccchhhHHHHHHHHhhccc--
Confidence            59999999 9999999999999999  999999986 1  111  1    11111110              012333  


Q ss_pred             CCCcHHhhhCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCC-CeEEEEecCCCCCchHHHHHHHHHhCC
Q 018512          100 GQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCP-NATVNLISNPVNSTVPIAAEVFKKAGT  178 (354)
Q Consensus       100 ~~~d~~~al~~aDvVIi~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p-~a~viv~tNPv~~~~~~~~~~~~~~~~  178 (354)
                       ++|+.+++++||+||.+.              .+|++..+++...+.+++| ++  |++||...+...-+    .....
T Consensus        80 -~~d~~~a~~~ad~ViEav--------------~E~l~~K~~v~~~l~~~~~~~~--ilasnTS~l~i~~l----a~~~~  138 (192)
T d1f0ya2          80 -STDAASVVHSTDLVVEAI--------------VENLKVKNELFKRLDKFAAEHT--IFASNTSSLQITSI----ANATT  138 (192)
T ss_dssp             -ESCHHHHTTSCSEEEECC--------------CSCHHHHHHHHHHHTTTSCTTC--EEEECCSSSCHHHH----HTTSS
T ss_pred             -cchhHhhhcccceehhhc--------------ccchhHHHHHHHHHhhhcccCc--eeeccCcccccchh----hhhcc
Confidence             357789999999999984              4577899999999999985 66  55888876654221    23333


Q ss_pred             CCCCCEEEec
Q 018512          179 YDPKKLLGVT  188 (354)
Q Consensus       179 ~p~~kviG~t  188 (354)
                       .+.|++|+-
T Consensus       139 -~p~r~ig~H  147 (192)
T d1f0ya2         139 -RQDRFAGLH  147 (192)
T ss_dssp             -CGGGEEEEE
T ss_pred             -CHhHEEeec
Confidence             246777773

>d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Fatty oxidation complex alpha subunit, middle domain
species: Pseudomonas fragi [TaxId: 296]

Probab=98.68  E-value=5.7e-09  Score=89.36  Aligned_cols=119  Identities=19%  Similarity=0.211  Sum_probs=80.8

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC-c--hh--HHH----HHhc-CCC--------CCeEEEEeCCCc
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN-T--PG--VTA----DISH-MDT--------GAVVRGFLGQPQ  103 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~-~--~g--~~~----dl~~-~~~--------~~~v~~~~~~~d  103 (354)
                      -.||+|||| |.+|+.+|..++..|+  +|+++|+++ .  .+  ...    ++.. ...        ...+..   +.+
T Consensus         4 I~~vaViGa-G~mG~~iA~~~a~~G~--~V~l~D~~~~~l~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~i~~---~~~   77 (186)
T d1wdka3           4 VKQAAVLGA-GIMGGGIAYQSASKGT--PILMKDINEHGIEQGLAEAAKLLVGRVDKGRMTPAKMAEVLNGIRP---TLS   77 (186)
T ss_dssp             CSSEEEECC-HHHHHHHHHHHHHTTC--CEEEECSSHHHHHHHHHHHHHHHHHHHTTTSSCHHHHHHHHHHEEE---ESS
T ss_pred             CCEEEEECc-CHHHHHHHHHHHhCCC--eEEEEECCHHHHhhhhhhhhhhHHhhhcccccchhhhhhhhceeec---ccc
Confidence            358999999 9999999999999998  999999986 1  11  111    1111 111        012333   234


Q ss_pred             HHhhhCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCC-CeEEEEecCCCCCchHHHHHHHHHhCCCCCC
Q 018512          104 LENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCP-NATVNLISNPVNSTVPIAAEVFKKAGTYDPK  182 (354)
Q Consensus       104 ~~~al~~aDvVIi~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p-~a~viv~tNPv~~~~~~~~~~~~~~~~~p~~  182 (354)
                       .+++.+||+||.+.              .+|++..+++.+++.++++ ++  |++||...+...-+    ..... .+.
T Consensus        78 -~~~~~~adlViEav--------------~E~l~~K~~lf~~l~~~~~~~~--IiaSnTS~l~i~~l----a~~~~-~p~  135 (186)
T d1wdka3          78 -YGDFGNVDLVVEAV--------------VENPKVKQAVLAEVENHVREDA--ILASNTSTISISLL----AKALK-RPE  135 (186)
T ss_dssp             -STTGGGCSEEEECC--------------CSCHHHHHHHHHHHHTTSCTTC--EEEECCSSSCHHHH----GGGCS-CGG
T ss_pred             -cccccccceeeeee--------------cchHHHHHHHHHHHHhhcCCCe--eEEeccccccHHHH----HHhcc-Cch
Confidence             36799999999984              4567899999999999995 66  55888877665322    22222 246


Q ss_pred             CEEEec
Q 018512          183 KLLGVT  188 (354)
Q Consensus       183 kviG~t  188 (354)
                      |++|+-
T Consensus       136 r~~g~H  141 (186)
T d1wdka3         136 NFVGMH  141 (186)
T ss_dssp             GEEEEE
T ss_pred             heEeec
Confidence            777763

>d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: GDP-mannose 6-dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=98.64  E-value=8.5e-08  Score=82.74  Aligned_cols=126  Identities=17%  Similarity=0.177  Sum_probs=79.6

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCC----------------CCCeEEEEeCCCcHHh
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMD----------------TGAVVRGFLGQPQLEN  106 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~----------------~~~~v~~~~~~~d~~~  106 (354)
                      |||+|||+ |+||..+|..|+..|+  +|+.+|+++.  .+..+....                ....+..   ++|+++
T Consensus         1 MkI~ViGl-G~vGl~~a~~la~~g~--~V~g~D~n~~--~i~~ln~g~~p~~e~~~~~~l~~~~~~~~~~~---~~~~~~   72 (202)
T d1mv8a2           1 MRISIFGL-GYVGAVCAGCLSARGH--EVIGVDVSST--KIDLINQGKSPIVEPGLEALLQQGRQTGRLSG---TTDFKK   72 (202)
T ss_dssp             CEEEEECC-STTHHHHHHHHHHTTC--EEEEECSCHH--HHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEE---ESCHHH
T ss_pred             CEEEEECC-CHhHHHHHHHHHhCCC--cEEEEeCCHH--HHHHhcccCCcccchhhhhhhhhhhccccccc---CCCHHH
Confidence            89999999 9999999999999998  9999999851  111122110                1122333   357889


Q ss_pred             hhCCCcEEEEcCCCCCCC-CCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEE-ecCCCCCchHHHHHHHHHhCCC
Q 018512          107 ALTGMDLVIIPAGVPRKP-GMTRDDLFNINAGIVRTLCEGIAKCCPNATVNL-ISNPVNSTVPIAAEVFKKAGTY  179 (354)
Q Consensus       107 al~~aDvVIi~ag~~~~~-g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv-~tNPv~~~~~~~~~~~~~~~~~  179 (354)
                      ++++||+++++.+.|... +......+   .....++.+.++...++..|++ .|-|.+....+....+.+.++.
T Consensus        73 ~i~~~d~i~i~VpTP~~~~~~~d~~~~---~~~~~~i~~~~~~~~~~~liii~STv~pGtt~~~~~~~l~~~~~~  144 (202)
T d1mv8a2          73 AVLDSDVSFICVGTPSKKNGDLDLGYI---ETVCREIGFAIREKSERHTVVVRSTVLPGTVNNVVIPLIEDCSGK  144 (202)
T ss_dssp             HHHTCSEEEECCCCCBCTTSSBCCHHH---HHHHHHHHHHHTTCCSCCEEEECSCCCTTHHHHTHHHHHHHHHSC
T ss_pred             HHhhCCEEEEecCccccccccccchhh---hhhhhhhhheeecccCCcceeeccccCCcchhhhhhhhhhccccc
Confidence            999999999999888543 22222222   2344455555555556766555 4677766654433334444343

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

Probab=98.60  E-value=7.7e-08  Score=88.86  Aligned_cols=168  Identities=18%  Similarity=0.156  Sum_probs=98.7

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCC-CCe-EEE-EeCCCcHHhhhC--CCcEEE
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDT-GAV-VRG-FLGQPQLENALT--GMDLVI  115 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~-~~~-v~~-~~~~~d~~~al~--~aDvVI  115 (354)
                      |||.|+||+|++|+.++..|+..++  +|+++|+..  .......+.+... ... ++. +.....+.++++  ++|+||
T Consensus         1 MKiLItG~tGfIG~~l~~~L~~~g~--~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d~Vi   78 (338)
T d1udca_           1 MRVLVTGGSGYIGSHTCVQLLQNGH--DVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEILHDHAIDTVI   78 (338)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC--EEEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTCHHHHHHHHHHTTCSEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcC--EEEEEECCCCcchhhHHHHHhhcCCCCEEEEeecCCHHHHHHHHhccCCCEEE
Confidence            8999999999999999999999997  999999744  2222222222111 111 111 111123445666  789999


Q ss_pred             EcCCCCCCC-C-CCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCC------CCchHHHHHHHHHhCCCCCCCEEEe
Q 018512          116 IPAGVPRKP-G-MTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPV------NSTVPIAAEVFKKAGTYDPKKLLGV  187 (354)
Q Consensus       116 i~ag~~~~~-g-~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv------~~~~~~~~~~~~~~~~~p~~kviG~  187 (354)
                      ++|+..... . +...+.+..|+...+++.+.++++..+.+|...|.-+      ....       .......+...+|.
T Consensus        79 HlAa~~~~~~~~~~~~~~~~~Nv~gt~nlL~~~~~~~v~~~i~~Ss~~vy~~~~~~~~~-------e~~~~~~p~~~Y~~  151 (338)
T d1udca_          79 HFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFIFSSSATVYGDQPKIPYV-------ESFPTGTPQSPYGK  151 (338)
T ss_dssp             ECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCCSSSBC-------TTSCCCCCSSHHHH
T ss_pred             ECCCccchhhHHhCHHHHHHhHHHHHHHHHHHHHHhCCCEEEecCcceEEccccccccc-------cccccCCCcchHHH
Confidence            998754211 0 1345678899999999999999998776666554211      1110       01112223455666


Q ss_pred             ccchHHHHHHHHHH-HhCCCCCCCc-ceEEeecC
Q 018512          188 TMLDVVRANTFVAE-VLGLDPRDVD-VPVVGGHA  219 (354)
Q Consensus       188 t~ld~~r~~~~la~-~l~v~~~~v~-~~v~G~hg  219 (354)
                      +.+...++-...++ ..+.+..-++ ..++|.+.
T Consensus       152 sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~G~~~  185 (338)
T d1udca_         152 SKLMVEQILTDLQKAQPDWSIALLRYFNPVGAHP  185 (338)
T ss_dssp             HHHHHHHHHHHHHHHSTTCEEEEEEECEEECCCT
T ss_pred             HHhhhhHHHHHHHhhccCCeEEEEeeccEEeccC
Confidence            65555544333333 3344433343 56777654

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.56  E-value=5.7e-08  Score=88.99  Aligned_cols=167  Identities=11%  Similarity=0.029  Sum_probs=103.1

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcCCC
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGV  120 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~ag~  120 (354)
                      +||.|+||+|++|++++..|+..|+  +|+.+|...  ....   +.+......+.... ...++.++.++|+||++|+.
T Consensus         2 KKIlVtG~sGfiG~~lv~~L~~~g~--~V~~~d~~~~~~~~~---~~~~~~~~~~d~~~-~~~~~~~~~~~d~VihlAa~   75 (312)
T d2b69a1           2 KRILITGGAGFVGSHLTDKLMMDGH--EVTVVDNFFTGRKRN---VEHWIGHENFELIN-HDVVEPLYIEVDQIYHLASP   75 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC--EEEEEECCSSCCGGG---TGGGTTCTTEEEEE-CCTTSCCCCCCSEEEECCSC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCcC--EEEEEeCCCcCCHHH---HHHhcCCCceEEEe-hHHHHHHHcCCCEEEECccc
Confidence            5999999999999999999999988  899999643  1111   11111112233221 22345667899999999875


Q ss_pred             CCCC--CCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecC-----CCCC-chHHHHHHHHHhCCCCCCCEEEeccchH
Q 018512          121 PRKP--GMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISN-----PVNS-TVPIAAEVFKKAGTYDPKKLLGVTMLDV  192 (354)
Q Consensus       121 ~~~~--g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tN-----Pv~~-~~~~~~~~~~~~~~~p~~kviG~t~ld~  192 (354)
                      ....  .....+.+..|+....++.+.+++... .+|...|.     |... ...   ........+.|...+|.+.+..
T Consensus        76 ~~~~~~~~~~~~~~~~Nv~g~~~ll~~~~~~~~-k~I~~SS~~vy~~~~~~~~~e---~~~~~~~~~~p~~~Y~~sK~~~  151 (312)
T d2b69a1          76 ASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGA-RLLLASTSEVYGDPEVHPQSE---DYWGHVNPIGPRACYDEGKRVA  151 (312)
T ss_dssp             CSHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTC-EEEEEEEGGGGBSCSSSSBCT---TCCCBCCSSSTTHHHHHHHHHH
T ss_pred             CCchhHHhCHHHHHHHHHHHHHHHHHHHHHcCC-cEEEEEChheecCCCCCCCCc---cccCCCCCCCCccHHHHHHHHH
Confidence            4311  124456778899999999999998765 33443331     1110 000   0000001122345567766666


Q ss_pred             HHHHHHHHHHhCCCCCCCc-ceEEeecC
Q 018512          193 VRANTFVAEVLGLDPRDVD-VPVVGGHA  219 (354)
Q Consensus       193 ~r~~~~la~~l~v~~~~v~-~~v~G~hg  219 (354)
                      ..+-..+++..|++...++ +.++|.+.
T Consensus       152 E~~~~~~~~~~~~~~~~lR~~~vyGp~~  179 (312)
T d2b69a1         152 ETMCYAYMKQEGVEVRVARIFNTFGPRM  179 (312)
T ss_dssp             HHHHHHHHHHHCCCEEEEEECCEECTTC
T ss_pred             HHHHHHHHHHhCCcEEEEEeeeEECCCC
Confidence            6777777888888766664 56888654

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=98.56  E-value=6.9e-08  Score=89.83  Aligned_cols=176  Identities=15%  Similarity=0.045  Sum_probs=108.0

Q ss_pred             CCCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEE--eCCCcHHhhhCCCcEEEE
Q 018512           39 GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGF--LGQPQLENALTGMDLVII  116 (354)
Q Consensus        39 ~~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~--~~~~d~~~al~~aDvVIi  116 (354)
                      .++.|||.|+||+|++|++++..|+.+++  +|+.+|.........++.    .......  ....++.++++++|.||+
T Consensus        12 ~~~nMKILVTGgsGfIGs~lv~~L~~~g~--~V~~~d~~~~~~~~~~~~----~~~~~~~D~~~~~~~~~~~~~~d~Vih   85 (363)
T d2c5aa1          12 PSENLKISITGAGGFIASHIARRLKHEGH--YVIASDWKKNEHMTEDMF----CDEFHLVDLRVMENCLKVTEGVDHVFN   85 (363)
T ss_dssp             TTSCCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESSCCSSSCGGGT----CSEEEECCTTSHHHHHHHHTTCSEEEE
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCcC--EEEEEeCCCccchhhhcc----cCcEEEeechhHHHHHHHhhcCCeEee
Confidence            45789999999999999999999999998  999999865211101111    1122211  111234567889999999


Q ss_pred             cCCCCCCC---CCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCCchHHH--HH---HHHHhCCCCCCCEEEec
Q 018512          117 PAGVPRKP---GMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIA--AE---VFKKAGTYDPKKLLGVT  188 (354)
Q Consensus       117 ~ag~~~~~---g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~--~~---~~~~~~~~p~~kviG~t  188 (354)
                      +|+.....   ..........|+.....+.+.+.+.+.+-+|...|--+.....-.  .+   .........|...+|.+
T Consensus        86 ~a~~~~~~~~~~~~~~~~~~~n~~gt~~ll~~~~~~~vk~~i~~SS~~~~~~~~~~~~~~~~~~~~e~~~~~p~~~Yg~s  165 (363)
T d2c5aa1          86 LAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASSACIYPEFKQLETTNVSLKESDAWPAEPQDAFGLE  165 (363)
T ss_dssp             CCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEGGGSCGGGSSSSSSCEECGGGGSSBCCSSHHHHH
T ss_pred             cccccccccccccccccccccccchhhHHHHhHHhhCccccccccccccccccccccccccccccccCCcCCCCCHHHHH
Confidence            88654321   223455677899999999999998876655544442111110000  00   00011112234556766


Q ss_pred             cchHHHHHHHHHHHhCCCCCCCc-ceEEeecCC
Q 018512          189 MLDVVRANTFVAEVLGLDPRDVD-VPVVGGHAG  220 (354)
Q Consensus       189 ~ld~~r~~~~la~~l~v~~~~v~-~~v~G~hg~  220 (354)
                      .+...++...+.+..|++..-++ ..++|.++.
T Consensus       166 K~~~E~~~~~~~~~~gl~~~ilR~~~vyG~~~~  198 (363)
T d2c5aa1         166 KLATEELCKHYNKDFGIECRIGRFHNIYGPFGT  198 (363)
T ss_dssp             HHHHHHHHHHHHHHHCCEEEEEEECCEECTTSC
T ss_pred             HHHHHHHHHHHHHHhCCCEEEEEeeeEeccCCc
Confidence            66666777777788888765554 568887654

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

Probab=98.45  E-value=2.3e-07  Score=84.55  Aligned_cols=111  Identities=22%  Similarity=0.202  Sum_probs=75.6

Q ss_pred             eEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchh---HHHHHhcCCCCCeEEEEeC----CCcHHhhhCCC--cEE
Q 018512           44 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPG---VTADISHMDTGAVVRGFLG----QPQLENALTGM--DLV  114 (354)
Q Consensus        44 kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g---~~~dl~~~~~~~~v~~~~~----~~d~~~al~~a--DvV  114 (354)
                      ||.|+||+|++|++++..|+.+|+  +|+.+|.....+   ....+...   ..++.+..    ..++.++++++  |+|
T Consensus         2 KILVTGatGfIGs~lv~~Ll~~g~--~V~~id~~~~~~~~~~~~~~~~~---~~~~~i~~Di~~~~~l~~~~~~~~~d~V   76 (338)
T d1orra_           2 KLLITGGCGFLGSNLASFALSQGI--DLIVFDNLSRKGATDNLHWLSSL---GNFEFVHGDIRNKNDVTRLITKYMPDSC   76 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTC--EEEEEECCCSTTHHHHHHHHHTT---CCCEEEECCTTCHHHHHHHHHHHCCSEE
T ss_pred             EEEEECCCcHHHHHHHHHHHHCcC--EEEEEECCCcccchhHHHHhhcc---CCcEEEEcccCCHHHHHHHHHhcCCceE
Confidence            899999999999999999999998  899998643211   11222221   22222211    12345666665  999


Q ss_pred             EEcCCCCCCCC--CCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 018512          115 IIPAGVPRKPG--MTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  159 (354)
Q Consensus       115 Ii~ag~~~~~g--~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~t  159 (354)
                      |++|+......  ....+....|+....++.+.+.+....-.|+..|
T Consensus        77 ih~aa~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~i~~sS  123 (338)
T d1orra_          77 FHLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNIIYSS  123 (338)
T ss_dssp             EECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEE
T ss_pred             EeecccccccccccChHHHHHHHHHHHHHHHHhhhcccccccccccc
Confidence            99987653221  1335667889999999999999988766666554

>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase
species: Arthrobacter, strain 1c [TaxId: 1663]

Probab=98.45  E-value=3e-07  Score=77.07  Aligned_cols=100  Identities=16%  Similarity=0.177  Sum_probs=64.5

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCch-hHHHHHhcC---CCCCeEEE--EeCCCcHHhhhCCCcEEEE
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP-GVTADISHM---DTGAVVRG--FLGQPQLENALTGMDLVII  116 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~-g~~~dl~~~---~~~~~v~~--~~~~~d~~~al~~aDvVIi  116 (354)
                      +||+|||| |.+|+.+|..|...|+  +|.++|+++.. ....+....   ........  ...+++.++++++||+||+
T Consensus         2 k~iaIiGa-G~~G~~~A~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~aD~iii   78 (184)
T d1bg6a2           2 KTYAVLGL-GNGGHAFAAYLALKGQ--SVLAWDIDAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLAVKDADVILI   78 (184)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTC--EEEEECSCHHHHHHHHHHTSEEEESSSCCEEECCSEEESCHHHHHTTCSEEEE
T ss_pred             CEEEEECc-cHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHcCCCchhhhhhhhhhhhhhhhhhhHhHhcCCCEEEE
Confidence            59999999 9999999999999998  99999997621 111111111   00011111  1113567899999999999


Q ss_pred             cCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecCC
Q 018512          117 PAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNP  161 (354)
Q Consensus       117 ~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~-p~a~viv~tNP  161 (354)
                      +....                ....++++++.+- ++.+|+...|.
T Consensus        79 ~v~~~----------------~~~~~~~~i~~~l~~~~~iv~~~g~  108 (184)
T d1bg6a2          79 VVPAI----------------HHASIAANIASYISEGQLIILNPGA  108 (184)
T ss_dssp             CSCGG----------------GHHHHHHHHGGGCCTTCEEEESSCC
T ss_pred             EEchh----------------HHHHHHHHhhhccCCCCEEEEeCCC
Confidence            84211                3456677777775 56766554443

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.44  E-value=9.4e-07  Score=75.66  Aligned_cols=104  Identities=16%  Similarity=0.172  Sum_probs=69.2

Q ss_pred             CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeC----CCcHHhhhCCCcEEEE
Q 018512           41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLG----QPQLENALTGMDLVII  116 (354)
Q Consensus        41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~----~~d~~~al~~aDvVIi  116 (354)
                      .++||+|+||+|++|++++..|+.+|+  +|.++++++.+     +.... ...++.+..    ..++.++++++|+||.
T Consensus         2 ~~kkIlV~GatG~iG~~v~~~Ll~~g~--~V~~~~R~~~~-----~~~~~-~~~~~~~~gD~~d~~~l~~al~~~d~vi~   73 (205)
T d1hdoa_           2 AVKKIAIFGATGQTGLTTLAQAVQAGY--EVTVLVRDSSR-----LPSEG-PRPAHVVVGDVLQAADVDKTVAGQDAVIV   73 (205)
T ss_dssp             CCCEEEEESTTSHHHHHHHHHHHHTTC--EEEEEESCGGG-----SCSSS-CCCSEEEESCTTSHHHHHHHHTTCSEEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCcC--EEEEEEcChhh-----ccccc-ccccccccccccchhhHHHHhcCCCEEEE
Confidence            356999999999999999999999998  99999987521     11111 111222211    1346788999999999


Q ss_pred             cCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEE
Q 018512          117 PAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNL  157 (354)
Q Consensus       117 ~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv  157 (354)
                      ++|........     ..+....+++++.+++.+-+-+|.+
T Consensus        74 ~~g~~~~~~~~-----~~~~~~~~~l~~aa~~~~v~r~i~~  109 (205)
T d1hdoa_          74 LLGTRNDLSPT-----TVMSEGARNIVAAMKAHGVDKVVAC  109 (205)
T ss_dssp             CCCCTTCCSCC-----CHHHHHHHHHHHHHHHHTCCEEEEE
T ss_pred             EeccCCchhhh-----hhhHHHHHHHHHHHHhcCCCeEEEE
Confidence            98764322222     2234567778888888775544443

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

Probab=98.43  E-value=3.3e-07  Score=85.34  Aligned_cols=167  Identities=14%  Similarity=0.030  Sum_probs=101.5

Q ss_pred             eEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCch---hHHHHHhcC--CCCCeEEEEeC----CCcHHhhhCCC--c
Q 018512           44 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP---GVTADISHM--DTGAVVRGFLG----QPQLENALTGM--D  112 (354)
Q Consensus        44 kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~---g~~~dl~~~--~~~~~v~~~~~----~~d~~~al~~a--D  112 (354)
                      ++.|+||+|++|++++..|+..|+  +|+.+|+....   .....+.+.  .....+..+..    ..++++.+++.  |
T Consensus         3 ~vLITGatGfiGs~lv~~Ll~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d   80 (357)
T d1db3a_           3 VALITGVTGQDGSYLAEFLLEKGY--EVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREVQPD   80 (357)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTC--EEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHHCCS
T ss_pred             EEEEeCCCcHHHHHHHHHHHHCcC--EEEEEECCCcccchhhHHHHHhhhhhcCCCeEEEEeecCCHHHHHHHHhccCCC
Confidence            555999999999999999999998  99999985410   111111111  11233444211    12345566655  9


Q ss_pred             EEEEcCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHhhhCC--CeEEEEec------CCCCCchHHHHHHHHHhCCCCCC
Q 018512          113 LVIIPAGVPRKP--GMTRDDLFNINAGIVRTLCEGIAKCCP--NATVNLIS------NPVNSTVPIAAEVFKKAGTYDPK  182 (354)
Q Consensus       113 vVIi~ag~~~~~--g~~r~d~~~~n~~~~~~i~~~i~~~~p--~a~viv~t------NPv~~~~~~~~~~~~~~~~~p~~  182 (354)
                      +|+++|+.....  .......+..|+....++++.+++++-  ...+|.+|      +|-+...       .+...+.|.
T Consensus        81 ~v~h~aa~~~~~~~~~~~~~~~~~Nv~gt~nllea~~~~~~~~~~r~i~~SS~~vYG~~~~~~~-------~E~~~~~P~  153 (357)
T d1db3a_          81 EVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSELYGLVQEIPQ-------KETTPFYPR  153 (357)
T ss_dssp             EEEECCCCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGGTTCCSSSB-------CTTSCCCCC
T ss_pred             EEEEeecccccchhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEEEchhhhCCCCCCCc-------CCCCCCCCC
Confidence            999998875322  234456678899999999999998763  34455543      3322210       112223345


Q ss_pred             CEEEeccchHHHHHHHHHHHhCCCCCCCc-ceEEeecC
Q 018512          183 KLLGVTMLDVVRANTFVAEVLGLDPRDVD-VPVVGGHA  219 (354)
Q Consensus       183 kviG~t~ld~~r~~~~la~~l~v~~~~v~-~~v~G~hg  219 (354)
                      ..+|.+.+....+...+++..+++..-++ +.++|...
T Consensus       154 ~~Y~~sK~~~E~~~~~~~~~~~l~~~ilR~~~vyGp~~  191 (357)
T d1db3a_         154 SPYAVAKLYAYWITVNYRESYGMYACNGILFNHESPRR  191 (357)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTS
T ss_pred             ChHHHHHHHHHHHHHHHHHHhCCCEEEEEeccccCCCC
Confidence            56777777677777778888888766664 45788643

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

Probab=98.42  E-value=3.3e-07  Score=83.78  Aligned_cols=175  Identities=16%  Similarity=0.185  Sum_probs=107.3

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCC----CcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCC----CcHHhhhCCCcEE
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPL----VSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQ----PQLENALTGMDLV  114 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~----~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~----~d~~~al~~aDvV  114 (354)
                      |||.|+||+|++|++++..|+..|+    ..+++.+|.....+....+........+..+...    ........+.|+|
T Consensus         1 MkIlItG~tGfIG~~l~~~L~~~g~~v~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~v   80 (322)
T d1r6da_           1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVHGDIRDAGLLARELRGVDAI   80 (322)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGGGGTTCTTEEEEECCTTCHHHHHHHTTTCCEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCCccCCceEEEEeCCCccccHhHhhhhhcCCCeEEEEeccccchhhhccccccceE
Confidence            8999999999999999999998774    3578888876421111112222122334333211    1234567999999


Q ss_pred             EEcCCCCCCCC--CCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCCchHHHHHHHHHhCCCCCCCEEEeccchH
Q 018512          115 IIPAGVPRKPG--MTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDV  192 (354)
Q Consensus       115 Ii~ag~~~~~g--~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~~~~~~~~~~p~~kviG~t~ld~  192 (354)
                      +++|+.+....  ....+.+..|+....++++.+.++...-+|...|.-+.....-  .-+.....+.|.-.+|.+.+..
T Consensus        81 i~~a~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~I~~Ss~~~yg~~~~--~~~~E~~~~~p~~~Y~~sK~~~  158 (322)
T d1r6da_          81 VHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGVGRVVHVSTNQVYGSIDS--GSWTESSPLEPNSPYAASKAGS  158 (322)
T ss_dssp             EECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGGGGCCCSS--SCBCTTSCCCCCSHHHHHHHHH
T ss_pred             EeecccccccccccchHHHhhhhHHHHHHHHHHHHHcCCceEEEeecceeecCCCC--CCCCCCCCCCCCCHHHHHHHHH
Confidence            99987653221  2234567889999999999999988765555544311100000  0001112233444566666666


Q ss_pred             HHHHHHHHHHhCCCCCCCc-ceEEeecC
Q 018512          193 VRANTFVAEVLGLDPRDVD-VPVVGGHA  219 (354)
Q Consensus       193 ~r~~~~la~~l~v~~~~v~-~~v~G~hg  219 (354)
                      ..+...+++..|++...++ +.++|.+.
T Consensus       159 E~~~~~~~~~~~~~~~~lR~~~vyGp~~  186 (322)
T d1r6da_         159 DLVARAYHRTYGLDVRITRCCNNYGPYQ  186 (322)
T ss_dssp             HHHHHHHHHHHCCCEEEEEECEEECTTC
T ss_pred             HHHHHHHHHHhCCCEEEEEeeeEECcCC
Confidence            6677777888888877775 67888553

>d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=98.40  E-value=7.3e-07  Score=73.86  Aligned_cols=91  Identities=15%  Similarity=0.181  Sum_probs=60.1

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcCCCCC
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVPR  122 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~ag~~~  122 (354)
                      |||+|||+ |.+|+++|..|...++  +|+.+|+++..  ......... .. ..   .++ .+++++||+||++.  | 
T Consensus         1 MkI~iIG~-G~mG~~lA~~l~~~g~--~V~~~d~~~~~--~~~a~~~~~-~~-~~---~~~-~~~~~~~DiIilav--p-   66 (165)
T d2f1ka2           1 MKIGVVGL-GLIGASLAGDLRRRGH--YLIGVSRQQST--CEKAVERQL-VD-EA---GQD-LSLLQTAKIIFLCT--P-   66 (165)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTC--EEEEECSCHHH--HHHHHHTTS-CS-EE---ESC-GGGGTTCSEEEECS--C-
T ss_pred             CEEEEEee-cHHHHHHHHHHHHCCC--EEEEEECCchH--HHHHHHhhc-cc-ee---eee-cccccccccccccC--c-
Confidence            89999999 9999999999999998  99999997521  111111111 11 11   123 37899999999974  2 


Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecC
Q 018512          123 KPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISN  160 (354)
Q Consensus       123 ~~g~~r~d~~~~n~~~~~~i~~~i~~~~-p~a~viv~tN  160 (354)
                                   ...+.++++.+..+- ++.+|+..++
T Consensus        67 -------------~~~~~~vl~~l~~~l~~~~iv~~~~s   92 (165)
T d2f1ka2          67 -------------IQLILPTLEKLIPHLSPTAIVTDVAS   92 (165)
T ss_dssp             -------------HHHHHHHHHHHGGGSCTTCEEEECCS
T ss_pred             -------------Hhhhhhhhhhhhhhcccccceeeccc
Confidence                         124445666666654 6676665543

>d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=98.39  E-value=8.2e-07  Score=74.98  Aligned_cols=97  Identities=23%  Similarity=0.233  Sum_probs=65.9

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCC----C---CCeEEEEeCCCcHHhhhCCCcEEE
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMD----T---GAVVRGFLGQPQLENALTGMDLVI  115 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~----~---~~~v~~~~~~~d~~~al~~aDvVI  115 (354)
                      |||+|||| |..|+++|..|..+++  +|.|+.++........+....    .   ...... ..++|+++++++||+||
T Consensus         1 MkI~ViGa-G~~GtalA~~la~~g~--~V~l~~r~~~~~~~~~i~~~~~~~~~~~~~~~~~i-~~~~~~~~~~~~ad~Ii   76 (180)
T d1txga2           1 MIVSILGA-GAMGSALSVPLVDNGN--EVRIWGTEFDTEILKSISAGREHPRLGVKLNGVEI-FWPEQLEKCLENAEVVL   76 (180)
T ss_dssp             CEEEEESC-CHHHHHHHHHHHHHCC--EEEEECCGGGHHHHHHHHTTCCBTTTTBCCCSEEE-ECGGGHHHHHTTCSEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCC--EEEEEEecccHHHHHHHhhhhhhhhhcchhccccc-cccccHHHHHhccchhh
Confidence            89999999 9999999999999888  999997743222333333211    1   111222 23578889999999999


Q ss_pred             EcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 018512          116 IPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  159 (354)
Q Consensus       116 i~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~t  159 (354)
                      ++.  |              ...++++++++..+-++..+++.+
T Consensus        77 ~av--p--------------s~~~~~~~~~l~~~l~~~~ii~~t  104 (180)
T d1txga2          77 LGV--S--------------TDGVLPVMSRILPYLKDQYIVLIS  104 (180)
T ss_dssp             ECS--C--------------GGGHHHHHHHHTTTCCSCEEEECC
T ss_pred             ccc--c--------------hhhhHHHHHhhccccccceecccc
Confidence            974  2              124567777777776655555554

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.32  E-value=3.8e-07  Score=79.81  Aligned_cols=115  Identities=18%  Similarity=0.085  Sum_probs=77.5

Q ss_pred             CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEE--EeCCCcHHhhhCCCcEEEEcC
Q 018512           41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRG--FLGQPQLENALTGMDLVIIPA  118 (354)
Q Consensus        41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~--~~~~~d~~~al~~aDvVIi~a  118 (354)
                      +.+||.|+||+|++|++++..|+.++...+|.++++++..........    .....  +....++.++++++|+||+++
T Consensus        13 ~~k~IlItGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~~~~~~~~~~----i~~~~~D~~~~~~~~~~~~~~d~vi~~~   88 (232)
T d2bkaa1          13 QNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYKN----VNQEVVDFEKLDDYASAFQGHDVGFCCL   88 (232)
T ss_dssp             TCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGGGGG----CEEEECCGGGGGGGGGGGSSCSEEEECC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCCCCCEEEEEecChhhhcccccce----eeeeeecccccccccccccccccccccc
Confidence            345899999999999999999998887678999998761100000011    11111  111235678899999999998


Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecC
Q 018512          119 GVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISN  160 (354)
Q Consensus       119 g~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tN  160 (354)
                      |... ......++...|+....++++.+.+...+.+|.+.|.
T Consensus        89 ~~~~-~~~~~~~~~~~~~~~~~~~~~~a~~~~v~~fi~~Ss~  129 (232)
T d2bkaa1          89 GTTR-GKAGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSSK  129 (232)
T ss_dssp             CCCH-HHHHHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred             cccc-cccchhhhhhhcccccceeeecccccCccccccCCcc
Confidence            7542 1123455667889999999999888776665555543

>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Ketopantoate reductase PanE
species: Escherichia coli [TaxId: 562]

Probab=98.27  E-value=4.7e-07  Score=74.60  Aligned_cols=102  Identities=17%  Similarity=0.213  Sum_probs=66.5

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcCCCCC
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVPR  122 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~ag~~~  122 (354)
                      |||+|||+ |.+|+.++..|...|+  +|.++|+++..................... . +..+++.++|+||++.... 
T Consensus         1 MkI~IiGa-G~iG~~~a~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~D~iii~vka~-   74 (167)
T d1ks9a2           1 MKITVLGC-GALGQLWLTALCKQGH--EVQGWLRVPQPYCSVNLVETDGSIFNESLT-A-NDPDFLATSDLLLVTLKAW-   74 (167)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTC--EEEEECSSCCSEEEEEEECTTSCEEEEEEE-E-SCHHHHHTCSEEEECSCGG-
T ss_pred             CEEEEECc-CHHHHHHHHHHHHCCC--ceEEEEcCHHHhhhhccccCCccccccccc-c-chhhhhcccceEEEeeccc-
Confidence            89999999 9999999999999998  999999987211111111111111111111 2 2357789999999985322 


Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecCCCCCc
Q 018512          123 KPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNST  165 (354)
Q Consensus       123 ~~g~~r~d~~~~n~~~~~~i~~~i~~~~-p~a~viv~tNPv~~~  165 (354)
                                     -+.+.++.+..+- ++..|+.+.|=++..
T Consensus        75 ---------------~~~~~~~~l~~~~~~~~~Iv~~qNG~~~~  103 (167)
T d1ks9a2          75 ---------------QVSDAVKSLASTLPVTTPILLIHNGMGTI  103 (167)
T ss_dssp             ---------------GHHHHHHHHHTTSCTTSCEEEECSSSCTT
T ss_pred             ---------------chHHHHHhhccccCcccEEeeccCcccHH
Confidence                           1335556665544 688888888876654

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

Probab=98.22  E-value=2e-06  Score=78.83  Aligned_cols=168  Identities=13%  Similarity=0.037  Sum_probs=97.8

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeC----CCc-HHhhhCCCcEEEEc
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLG----QPQ-LENALTGMDLVIIP  117 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~----~~d-~~~al~~aDvVIi~  117 (354)
                      |||.|+||+|++|++++..|+..++. +|+.+|+.... . ..+..   .+.++.+..    ..+ .+.+++++|+||++
T Consensus         1 MKILITG~tGfiG~~l~~~Ll~~g~~-~V~~ld~~~~~-~-~~~~~---~~~~~~i~~Di~~~~~~~~~~~~~~d~Vih~   74 (342)
T d2blla1           1 MRVLILGVNGFIGNHLTERLLREDHY-EVYGLDIGSDA-I-SRFLN---HPHFHFVEGDISIHSEWIEYHVKKCDVVLPL   74 (342)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHSTTC-EEEEEESCCGG-G-GGGTT---CTTEEEEECCTTTCSHHHHHHHHHCSEEEEC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCC-EEEEEeCCCcc-h-hhhcc---CCCeEEEECccCChHHHHHHHHhCCCccccc
Confidence            89999999999999999999888843 89999986521 0 11111   122333221    112 23477899999999


Q ss_pred             CCCCCCCC--CCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecC-----C-CCCchHHHHHHHHHhCCCCCCCEEEecc
Q 018512          118 AGVPRKPG--MTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISN-----P-VNSTVPIAAEVFKKAGTYDPKKLLGVTM  189 (354)
Q Consensus       118 ag~~~~~g--~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tN-----P-v~~~~~~~~~~~~~~~~~p~~kviG~t~  189 (354)
                      |+.....+  ......+..|+....++++.+.+...+-+ +..|.     + ......- ........-..+...+|.+.
T Consensus        75 a~~~~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~~~~-~~ss~~~~~~~~~~~~~~~-~~~~~~~~~~~p~~~Y~~sK  152 (342)
T d2blla1          75 VAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRII-FPSTSEVYGMCSDKYFDED-HSNLIVGPVNKPRWIYSVSK  152 (342)
T ss_dssp             BCCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCEEE-EECCGGGGBTCCCSSBCTT-TCCCBCCCTTCGGGHHHHHH
T ss_pred             cccccccccccCCcccccccccccccccccccccccccc-ccccccccccccccccccc-cccccccccCCCcchhhhcc
Confidence            88653222  12345678999999999999998865443 32221     1 1110000 00000000011234466666


Q ss_pred             chHHHHHHHHHHHhCCCCCCCc-ceEEeec
Q 018512          190 LDVVRANTFVAEVLGLDPRDVD-VPVVGGH  218 (354)
Q Consensus       190 ld~~r~~~~la~~l~v~~~~v~-~~v~G~h  218 (354)
                      +...++...+++..|++..-++ ..+.|..
T Consensus       153 ~~~E~~~~~~~~~~~~~~~i~r~~~~~g~~  182 (342)
T d2blla1         153 QLLDRVIWAYGEKEGLQFTLFRPFNWMGPR  182 (342)
T ss_dssp             HHHHHHHHHHHHHHCCCEEEEEECSEECSS
T ss_pred             cchhhhhhhhhcccCceeEEeecccccccc
Confidence            6666777777888887755443 4455543

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=98.21  E-value=1.2e-06  Score=80.71  Aligned_cols=176  Identities=16%  Similarity=0.114  Sum_probs=101.8

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeC----CCcHHhhhCCCcEEEEc
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLG----QPQLENALTGMDLVIIP  117 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~----~~d~~~al~~aDvVIi~  117 (354)
                      +|||.|+||+|+||++++..|+..+....++.+|.....+....+.... ...+..+..    ...+.+++++.|.|++.
T Consensus         2 ~mkILVTGgtGfIGs~lv~~L~~~g~~v~v~~~d~~~~~~~~~~~~~~~-~~~i~~~~~Di~d~~~~~~~~~~~~~v~~~   80 (346)
T d1oc2a_           2 FKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAIL-GDRVELVVGDIADAELVDKLAAKADAIVHY   80 (346)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGGC-SSSEEEEECCTTCHHHHHHHHTTCSEEEEC
T ss_pred             cCEEEEeCCCcHHHHHHHHHHHHCCCCeEEEEEeCCCccccHHHHHHhh-cCCeEEEEccCCCHHHHHHHHhhhhhhhhh
Confidence            6899999999999999999999888644677777533111111111111 122333211    13456788999999998


Q ss_pred             CCCCCCCC--CCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCC--Cch----HHH----HHHHHHhCCCCCCCEE
Q 018512          118 AGVPRKPG--MTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVN--STV----PIA----AEVFKKAGTYDPKKLL  185 (354)
Q Consensus       118 ag~~~~~g--~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv~--~~~----~~~----~~~~~~~~~~p~~kvi  185 (354)
                      |+......  ....+.+..|+....+++..+.+.+..- +...|.-+.  ...    +..    ...+...+...|...+
T Consensus        81 a~~~~~~~~~~~~~~~~~~N~~g~~nll~~~~~~~~k~-i~~ss~~vyg~~~~~~~~~~~~~~~~~~~~e~~~~~p~s~Y  159 (346)
T d1oc2a_          81 AAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYDIRF-HHVSTDEVYGDLPLREDLPGHGEGPGEKFTAETNYNPSSPY  159 (346)
T ss_dssp             CSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHHTCEE-EEEEEGGGGCCBCCGGGSTTTTCSTTSSBCTTSCCCCCSHH
T ss_pred             hhcccccchhhCcccceeeehHhHHhhhhhhccccccc-cccccceEecccCccccccccccCcccccccCCCCCCCCHH
Confidence            86553221  1234567889999999999999887543 333322111  000    000    0000001112233456


Q ss_pred             EeccchHHHHHHHHHHHhCCCCCCCc-ceEEeecC
Q 018512          186 GVTMLDVVRANTFVAEVLGLDPRDVD-VPVVGGHA  219 (354)
Q Consensus       186 G~t~ld~~r~~~~la~~l~v~~~~v~-~~v~G~hg  219 (354)
                      |.+.+...++-..+.+..|++..-++ ..++|.+.
T Consensus       160 ~~sK~~~E~~~~~~~~~~~i~~~ilR~~~vyGp~~  194 (346)
T d1oc2a_         160 SSTKAASDLIVKAWVRSFGVKATISNCSNNYGPYQ  194 (346)
T ss_dssp             HHHHHHHHHHHHHHHHHHCCEEEEEEECCEESTTC
T ss_pred             HHHHHHHHHHHHHHHHHcCCCEEEEeecceeCCCC
Confidence            77766666776777778787665554 56788544

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=98.20  E-value=3.4e-06  Score=78.93  Aligned_cols=176  Identities=13%  Similarity=0.111  Sum_probs=100.4

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchh------------------HHHHHhcCCCCCeEEEEeCC--
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPG------------------VTADISHMDTGAVVRGFLGQ--  101 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g------------------~~~dl~~~~~~~~v~~~~~~--  101 (354)
                      .|||.|+||+|++|++++..|++.|+  +|+.+|......                  ....+.... ...+..+...  
T Consensus         1 g~kILVTGatGfiG~~lv~~Ll~~g~--~V~~iDnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~Dl~   77 (393)
T d1i24a_           1 GSRVMVIGGDGYCGWATALHLSKKNY--EVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALT-GKSIELYVGDIC   77 (393)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTC--EEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHH-CCCCEEEESCTT
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcC--EEEEEecCCcccccccccccccccccchHHHHHHHHhhc-CCCcEEEEccCC
Confidence            47999999999999999999999998  999999421000                  000010000 1123322111  


Q ss_pred             --CcHHhhhCC--CcEEEEcCCCCCCC--CCC---HHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCC-chHHH-H
Q 018512          102 --PQLENALTG--MDLVIIPAGVPRKP--GMT---RDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNS-TVPIA-A  170 (354)
Q Consensus       102 --~d~~~al~~--aDvVIi~ag~~~~~--g~~---r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv~~-~~~~~-~  170 (354)
                        ..+++++++  .|+|+++|+.....  -..   ..+....|+....++.+.+++++.+..++..|.-+.. ....- .
T Consensus        78 d~~~l~~~~~~~~~d~ViHlAa~~~~~~s~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~~i~~ss~~~~~~~~~~~~  157 (393)
T d1i24a_          78 DFEFLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFGEECHLVKLGTMGEYGTPNIDIE  157 (393)
T ss_dssp             SHHHHHHHHHHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGGCCCSSCBC
T ss_pred             CHHHHHHHHHhhcchheeccccccccccccccccccccccccccccccHHHHHHHHhccccceeeccccccccccccccc
Confidence              123455654  49999998764311  112   2356688999999999999999988777766532211 00000 0


Q ss_pred             HHHH--Hh--------CCCCCCCEEEeccchHHHHHHHHHHHhCCCCCCCc-ceEEeecCC
Q 018512          171 EVFK--KA--------GTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVD-VPVVGGHAG  220 (354)
Q Consensus       171 ~~~~--~~--------~~~p~~kviG~t~ld~~r~~~~la~~l~v~~~~v~-~~v~G~hg~  220 (354)
                      +...  ..        ....+...+|.+.+....+...+++..+++...++ ..++|...+
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~~~l~~~~lR~~~v~G~~~~  218 (393)
T d1i24a_         158 EGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKTD  218 (393)
T ss_dssp             SSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECSCCT
T ss_pred             cccccccccccccccccccccccHHHHHhhhhcccccccccccceeeeecccccccCCCcc
Confidence            0000  00        00112234555555555666667778888766664 467775543

>d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Trypanosome (Leishmania mexicana) [TaxId: 5665]

Probab=98.20  E-value=7.3e-07  Score=76.04  Aligned_cols=71  Identities=14%  Similarity=0.221  Sum_probs=50.9

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcC--C------CCCeEEEEeCCCcHHhhhCCCcE
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHM--D------TGAVVRGFLGQPQLENALTGMDL  113 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~--~------~~~~v~~~~~~~d~~~al~~aDv  113 (354)
                      +.||+|||| |..|+++|..|..+++  +|.|+++++.......-.+.  .      ....+..   ++|+++++++||+
T Consensus         7 m~KI~ViGa-G~wGtAlA~~La~~g~--~V~l~~r~~~~~~~i~~~~~n~~yl~~~~l~~~i~~---t~~l~~a~~~ad~   80 (189)
T d1n1ea2           7 LNKAVVFGS-GAFGTALAMVLSKKCR--EVCVWHMNEEEVRLVNEKRENVLFLKGVQLASNITF---TSDVEKAYNGAEI   80 (189)
T ss_dssp             EEEEEEECC-SHHHHHHHHHHHTTEE--EEEEECSCHHHHHHHHHHTBCTTTSTTCBCCTTEEE---ESCHHHHHTTCSC
T ss_pred             eceEEEECC-CHHHHHHHHHHHHcCC--eEEEEEecHHHHHHHhhccccccccccccccccccc---chhhhhccCCCCE
Confidence            357999999 9999999999999888  99999987621111111121  1      1223543   4688999999999


Q ss_pred             EEEcC
Q 018512          114 VIIPA  118 (354)
Q Consensus       114 VIi~a  118 (354)
                      ||++.
T Consensus        81 iiiav   85 (189)
T d1n1ea2          81 ILFVI   85 (189)
T ss_dssp             EEECS
T ss_pred             EEEcC
Confidence            99974

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=98.20  E-value=1.1e-06  Score=81.84  Aligned_cols=176  Identities=15%  Similarity=0.057  Sum_probs=101.8

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeC-CCc---HHhhhC--CCcEEEE
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLG-QPQ---LENALT--GMDLVII  116 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~-~~d---~~~al~--~aDvVIi  116 (354)
                      |||.|+||+|++|++++..|+..++- .++++|.....+....+.+......+..+.. -.|   +++.++  ++|+||+
T Consensus         1 MkILItG~tGfIGs~l~~~L~~~g~~-vv~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d~Vih   79 (361)
T d1kewa_           1 MKILITGGAGFIGSAVVRHIIKNTQD-TVVNIDKLTYAGNLESLSDISESNRYNFEHADICDSAEITRIFEQYQPDAVMH   79 (361)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHHCSC-EEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHHCCSEEEE
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCC-EEEEEeCCCccccHHHHHhhhhcCCcEEEEccCCCHHHHHHHHHhCCCCEEEE
Confidence            79999999999999999999988863 4778887542111122333322233443221 122   233343  5899999


Q ss_pred             cCCCCCCCC--CCHHHHHHHHHHHHHHHHHHHhhhCCC--------eEEEEe-cCCCCCc---hHHHHHH-----H-HHh
Q 018512          117 PAGVPRKPG--MTRDDLFNINAGIVRTLCEGIAKCCPN--------ATVNLI-SNPVNST---VPIAAEV-----F-KKA  176 (354)
Q Consensus       117 ~ag~~~~~g--~~r~d~~~~n~~~~~~i~~~i~~~~p~--------a~viv~-tNPv~~~---~~~~~~~-----~-~~~  176 (354)
                      +|+......  ....+.+..|+....++.+.+.++...        ..++.. |--+...   ... .+-     . ...
T Consensus        80 lAa~~~~~~~~~~p~~~~~~N~~gt~nl~~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~-~~~~~~~~~~~e~  158 (361)
T d1kewa_          80 LAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDE-VENSVTLPLFTET  158 (361)
T ss_dssp             CCSCCCHHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGG-SCTTSCCCCBCTT
T ss_pred             CccccchhhHHhCHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCceEEEEeccceeeCCCccCCc-cccccCCCCcccC
Confidence            987542110  123456788999999999888776422        134433 3111100   000 000     0 000


Q ss_pred             CCCCCCCEEEeccchHHHHHHHHHHHhCCCCCCCc-ceEEeecCC
Q 018512          177 GTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVD-VPVVGGHAG  220 (354)
Q Consensus       177 ~~~p~~kviG~t~ld~~r~~~~la~~l~v~~~~v~-~~v~G~hg~  220 (354)
                      ....|..++|.+.+...++...+++..|++...++ ..|+|.++.
T Consensus       159 ~~~~p~s~Yg~sK~~~E~~~~~~~~~~~i~~~~lR~~~vyGp~~~  203 (361)
T d1kewa_         159 TAYAPSSPYSASKASSDHLVRAWRRTYGLPTIVTNCSNNYGPYHF  203 (361)
T ss_dssp             SCCCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTCC
T ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHHHhCCCEEEEecCceECcCCC
Confidence            11223445777777777787888888898776664 568886654

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=98.19  E-value=2.7e-06  Score=78.05  Aligned_cols=175  Identities=14%  Similarity=0.002  Sum_probs=107.9

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chh---HHHHHhcCCCCCeEEEEeC-CCc---HHhhhCCCc
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPG---VTADISHMDTGAVVRGFLG-QPQ---LENALTGMD  112 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g---~~~dl~~~~~~~~v~~~~~-~~d---~~~al~~aD  112 (354)
                      +++|.|+||+|++|++++..|.+.|+  +|..+|+..  ...   ....+........++.+.. ..|   ......+.|
T Consensus        16 ~k~iLVTG~tGfIGs~lv~~L~~~g~--~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~~   93 (341)
T d1sb8a_          16 PKVWLITGVAGFIGSNLLETLLKLDQ--KVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACAGVD   93 (341)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHTTCS
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCcC--EEEEEECCCCcchhhHHHHHHhhhhcccCCeeEEeecccccccccccccccc
Confidence            44999999999999999999999998  999999743  111   1111111100122332211 122   345678999


Q ss_pred             EEEEcCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCCchHHHHHHHHHhCCCCCCCEEEeccc
Q 018512          113 LVIIPAGVPRKP--GMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTML  190 (354)
Q Consensus       113 vVIi~ag~~~~~--g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~~~~~~~~~~p~~kviG~t~l  190 (354)
                      +|++.+.....+  .....+....|+....++.+.+.+...+.+|...|..+..-..-  .-.....-..|.-.+|.+.+
T Consensus        94 ~v~~~~a~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~~~i~~SS~~vyg~~~~--~~~~E~~~~~p~~~Y~~sK~  171 (341)
T d1sb8a_          94 YVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAKVQSFTYAASSSTYGDHPG--LPKVEDTIGKPLSPYAVTKY  171 (341)
T ss_dssp             EEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGTTCCC--SSBCTTCCCCCCSHHHHHHH
T ss_pred             ccccccccccccccccCccchhheeehhHHHHHHHHHhcCCceEEEcccceeeCCCCC--CCccCCCCCCCCCcchHHHH
Confidence            999987644211  12345567889999999999999888777666665322110000  00001111223456677767


Q ss_pred             hHHHHHHHHHHHhCCCCCCCc-ceEEeecCC
Q 018512          191 DVVRANTFVAEVLGLDPRDVD-VPVVGGHAG  220 (354)
Q Consensus       191 d~~r~~~~la~~l~v~~~~v~-~~v~G~hg~  220 (354)
                      ...++...+++..+++..-++ +.++|.+.+
T Consensus       172 ~~E~~~~~~~~~~~i~~~ilR~~~v~G~~~~  202 (341)
T d1sb8a_         172 VNELYADVFSRCYGFSTIGLRYFNVFGRRQD  202 (341)
T ss_dssp             HHHHHHHHHHHHHCCCCEEEEECCEECTTCC
T ss_pred             HHHHHHHHHHHHhCCCeEEEEeceeeccCcC
Confidence            777787888888888876666 558887644

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.14  E-value=3.6e-06  Score=77.47  Aligned_cols=113  Identities=19%  Similarity=0.058  Sum_probs=74.4

Q ss_pred             eEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhH---HHHHhcCCCCCeEEE-EeCCCcHHhhhC--CCcEEE
Q 018512           44 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGV---TADISHMDTGAVVRG-FLGQPQLENALT--GMDLVI  115 (354)
Q Consensus        44 kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~---~~dl~~~~~~~~v~~-~~~~~d~~~al~--~aDvVI  115 (354)
                      .|.|+||+|++|++++..|+.+++  +|+.+|...  ....   ...+.+.. ...+.. +....+++.+++  +.|+||
T Consensus         3 ~ILVTGatGfIG~~lv~~Ll~~g~--~V~~~d~~~~~~~~~~~~~~~~~~~~-v~~~~~Dl~d~~~l~~~~~~~~~d~Vi   79 (347)
T d1z45a2           3 IVLVTGGAGYIGSHTVVELIENGY--DCVVADNLSNSTYDSVARLEVLTKHH-IPFYEVDLCDRKGLEKVFKEYKIDSVI   79 (347)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTC--EEEEEECCSSCCTHHHHHHHHHHTSC-CCEEECCTTCHHHHHHHHHHSCCCEEE
T ss_pred             EEEEeCCCcHHHHHHHHHHHHCcC--eEEEEECCCCcchhHHHhHHhhcccC-CeEEEeecCCHHHHHHHHhccCCCEEE
Confidence            588999999999999999999998  999999643  1111   11222211 111211 111122344444  789999


Q ss_pred             EcCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 018512          116 IPAGVPRKP--GMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  159 (354)
Q Consensus       116 i~ag~~~~~--g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~t  159 (354)
                      ++|+.....  .+....+...|+.....+.+.+++...+.+|...|
T Consensus        80 hlAa~~~~~~~~~~~~~~~~~N~~~t~~ll~~~~~~~i~~~i~~SS  125 (347)
T d1z45a2          80 HFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYNVSKFVFSSS  125 (347)
T ss_dssp             ECCSCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEE
T ss_pred             EccccccccccccCcccccccchhhhHHHHHHHHhcccceEEeecc
Confidence            998865321  12345667789999999999999988777666665

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

Probab=98.07  E-value=2.7e-05  Score=71.40  Aligned_cols=113  Identities=16%  Similarity=0.020  Sum_probs=74.4

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc-hhHH---HHHhcCCCCCeEEEE----eCCCcHHhhhCCCcE
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT-PGVT---ADISHMDTGAVVRGF----LGQPQLENALTGMDL  113 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~-~g~~---~dl~~~~~~~~v~~~----~~~~d~~~al~~aDv  113 (354)
                      ..||+|+||+|++|++++..|++.|+  +|+...++.. ....   .+....  ......+    .....+.+++.++|.
T Consensus        11 gk~VlVTG~sGfIGs~l~~~Ll~~G~--~V~~~vR~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~   86 (342)
T d1y1pa1          11 GSLVLVTGANGFVASHVVEQLLEHGY--KVRGTARSASKLANLQKRWDAKYP--GRFETAVVEDMLKQGAYDEVIKGAAG   86 (342)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESSHHHHHHHHHHHHHHST--TTEEEEECSCTTSTTTTTTTTTTCSE
T ss_pred             cCEEEEECCCCHHHHHHHHHHHHCcC--EEEEEeCCchhHHHHHHhhhcccc--ccccEEEeccccchhhhhhhcccchh
Confidence            35999999999999999999999997  8876666541 1111   111111  1111111    122345678999999


Q ss_pred             EEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEec
Q 018512          114 VIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLIS  159 (354)
Q Consensus       114 VIi~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~-p~a~viv~t  159 (354)
                      |++.++... .......+...|+....++.+.+.++. ..-+|+..|
T Consensus        87 v~~~a~~~~-~~~~~~~~~~~nv~gt~~ll~~~~~~~~v~~~i~~SS  132 (342)
T d1y1pa1          87 VAHIASVVS-FSNKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSS  132 (342)
T ss_dssp             EEECCCCCS-CCSCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECC
T ss_pred             hhhhccccc-ccccccccccchhhhHHHHHHhhhccccccccccccc
Confidence            999887543 334455667789999999999998874 444444333

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

Probab=98.05  E-value=1.1e-06  Score=79.54  Aligned_cols=160  Identities=14%  Similarity=0.098  Sum_probs=96.8

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhh--hCCCcEEEEcCCC
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENA--LTGMDLVIIPAGV  120 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~a--l~~aDvVIi~ag~  120 (354)
                      +||.|+||+|++|++++..|++++.  ++++.|....    .|+.+.            ..+.+.  -.+.|+|++.++.
T Consensus         3 kkIlITG~tGfiG~~l~~~L~~~g~--~vi~~~~~~~----~~~~~~------------~~~~~~~~~~~~d~v~~~a~~   64 (315)
T d1e6ua_           3 QRVFIAGHRGMVGSAIRRQLEQRGD--VELVLRTRDE----LNLLDS------------RAVHDFFASERIDQVYLAAAK   64 (315)
T ss_dssp             EEEEEETTTSHHHHHHHHHHTTCTT--EEEECCCTTT----CCTTCH------------HHHHHHHHHHCCSEEEECCCC
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHCcC--EEEEecCchh----ccccCH------------HHHHHHHhhcCCCEEEEcchh
Confidence            4999999999999999999999887  6677775431    011110            011111  2357899998754


Q ss_pred             CCCC---CCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCCchH--HHHHH-HHHhCCCCCCCEEEeccchHHH
Q 018512          121 PRKP---GMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVP--IAAEV-FKKAGTYDPKKLLGVTMLDVVR  194 (354)
Q Consensus       121 ~~~~---g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv~~~~~--~~~~~-~~~~~~~p~~kviG~t~ld~~r  194 (354)
                      ....   .....+++..|+....++++.+.+++.+-+|...|.-+..-..  -..|- ....+-.|++..+|.+.+...+
T Consensus        65 ~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~v~~~i~~SS~~vyg~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~  144 (315)
T d1e6ua_          65 VGGIVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLFLGSSCIYPKLAKQPMAESELLQGTLEPTNEPYAIAKIAGIK  144 (315)
T ss_dssp             CCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECCGGGSCTTCCSSBCGGGTTSSCCCGGGHHHHHHHHHHHH
T ss_pred             ccccccchhhHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECCceEcCCCCCCCccCCccccCCCCCCCCHHHHHHHHHHH
Confidence            4211   1234567788999999999999988766666554422210000  00000 0000111222346777666777


Q ss_pred             HHHHHHHHhCCCCCCCc-ceEEeecCC
Q 018512          195 ANTFVAEVLGLDPRDVD-VPVVGGHAG  220 (354)
Q Consensus       195 ~~~~la~~l~v~~~~v~-~~v~G~hg~  220 (354)
                      +...+.+..|++..-++ ..|+|.++.
T Consensus       145 ~~~~~~~~~gl~~~ilR~~~vyGp~~~  171 (315)
T d1e6ua_         145 LCESYNRQYGRDYRSVMPTNLYGPHDN  171 (315)
T ss_dssp             HHHHHHHHHCCEEEEEEECEEESTTCC
T ss_pred             HHHHHHHHhCCCEEEEeeccEECCCCC
Confidence            77777888888766665 678897654

>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Trypanosoma brucei [TaxId: 5691]

Probab=98.04  E-value=1.1e-05  Score=75.10  Aligned_cols=177  Identities=15%  Similarity=0.130  Sum_probs=102.7

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHh-CCCCcEEEEEecCC----------c-hhHHHHHhcCC------CCCeEEEEeCC-C
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKI-NPLVSVLHLYDVVN----------T-PGVTADISHMD------TGAVVRGFLGQ-P  102 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~-~~~~~ei~L~D~~~----------~-~g~~~dl~~~~------~~~~v~~~~~~-~  102 (354)
                      -|||.|+||+|++|++++..|+. .+.  +|+.+|.-.          . ......+....      ....+..+... .
T Consensus         2 ~MKVLITG~tGfIGs~lv~~LL~~~~~--~V~~~D~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~   79 (383)
T d1gy8a_           2 HMRVLVCGGAGYIGSHFVRALLRDTNH--SVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVR   79 (383)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCCC--EEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTT
T ss_pred             cCEEEEeCCCcHHHHHHHHHHHHhCCC--EEEEEecCCcccccchhhhhhhhHHHHhhhhccccccccccceEEEECccc
Confidence            48999999999999999998875 677  899999521          1 11112222211      01122222111 1


Q ss_pred             c---HHhhh---CCCcEEEEcCCCCCCCC--CCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCC-chH--HHHH
Q 018512          103 Q---LENAL---TGMDLVIIPAGVPRKPG--MTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNS-TVP--IAAE  171 (354)
Q Consensus       103 d---~~~al---~~aDvVIi~ag~~~~~g--~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv~~-~~~--~~~~  171 (354)
                      |   +++++   +++|+|+++|+......  .........|+....++...+++..+..++...+--+.. ...  ...+
T Consensus        80 d~~~l~~~~~~~~~~d~ViH~Aa~~~~~~~~~~~~~~~~~N~~~t~~~l~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~  159 (383)
T d1gy8a_          80 NEDFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLHKCDKIIFSSSAAIFGNPTMGSVSTN  159 (383)
T ss_dssp             CHHHHHHHHHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGTBSCCC-----C
T ss_pred             CHHHhhhhhhccceeehhhcccccccccccccccccccccccccccccchhhhccCCccccccccccccccccccccccc
Confidence            2   23333   57899999987643211  123456778999999999999998877655544211100 000  0000


Q ss_pred             --HHHHhCCCCCCCEEEeccchHHHHHHHHHHHhCCCCCCCc-ceEEeecCC
Q 018512          172 --VFKKAGTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVD-VPVVGGHAG  220 (354)
Q Consensus       172 --~~~~~~~~p~~kviG~t~ld~~r~~~~la~~l~v~~~~v~-~~v~G~hg~  220 (354)
                        -+.....+.|...+|.+.+...++-..+.+..|++...++ +.++|....
T Consensus       160 ~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~gl~~~~lR~~~vyG~~~~  211 (383)
T d1gy8a_         160 AEPIDINAKKSPESPYGESKLIAERMIRDCAEAYGIKGICLRYFNACGAHED  211 (383)
T ss_dssp             CCCBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECCCTT
T ss_pred             ccccccccCCCCCCHHHhhHhHHHHHHHHHHHHhCCCEEEEecceeeccCcc
Confidence              0000111234455666666677777888888898776664 567885543

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

Probab=97.99  E-value=6.2e-06  Score=75.63  Aligned_cols=112  Identities=16%  Similarity=0.146  Sum_probs=73.0

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc--hhHHHHHhcCCCCCeEEEEeCC-Cc---HHhhhC--CCcEE
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFLGQ-PQ---LENALT--GMDLV  114 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~--~g~~~dl~~~~~~~~v~~~~~~-~d---~~~al~--~aDvV  114 (354)
                      +||.|+||+|++|++++..|+..|+  +|..+|++..  ..... .....  ..++...+. .|   +.++++  ..|+|
T Consensus         9 KkILVTG~tGfIGs~lv~~Ll~~g~--~V~~~~r~~~~~~~~~~-~~~~~--~~i~~~~~Dl~d~~~l~~~~~~~~~~~v   83 (356)
T d1rkxa_           9 KRVFVTGHTGFKGGWLSLWLQTMGA--TVKGYSLTAPTVPSLFE-TARVA--DGMQSEIGDIRDQNKLLESIREFQPEIV   83 (356)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESSCSSSSCHHH-HTTTT--TTSEEEECCTTCHHHHHHHHHHHCCSEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCC--EEEEEECCCCccHHHHh-hhhcc--cCCeEEEeeccChHhhhhhhhhchhhhh
Confidence            5999999999999999999999998  9999998762  22211 11111  112222111 12   234444  45889


Q ss_pred             EEcCCCCCCCC--CCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 018512          115 IIPAGVPRKPG--MTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  159 (354)
Q Consensus       115 Ii~ag~~~~~g--~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~t  159 (354)
                      +++|+.+....  ..-......|+....++++.+++......++..|
T Consensus        84 ~~~aa~~~~~~~~~~~~~~~~~Nv~g~~n~l~~~~~~~~~~~~~~~s  130 (356)
T d1rkxa_          84 FHMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNIT  130 (356)
T ss_dssp             EECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEEC
T ss_pred             hhhhccccccccccCCccccccccccchhhhhhhhcccccccccccc
Confidence            98876542110  1234566779999999999999988666555443

>d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Salmonella typhimurium [TaxId: 90371]

Probab=97.96  E-value=1.1e-05  Score=66.37  Aligned_cols=64  Identities=19%  Similarity=0.244  Sum_probs=48.8

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcC
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA  118 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~a  118 (354)
                      |||.|||. |.+|+.+|..|+..|+  +|+.+|+++.  ...++.....    ..   ..+..++++++|+||++.
T Consensus         1 MkIgiIGl-G~MG~~~A~~L~~~G~--~V~~~d~~~~--~~~~~~~~~~----~~---~~~~~e~~~~~d~ii~~v   64 (161)
T d1vpda2           1 MKVGFIGL-GIMGKPMSKNLLKAGY--SLVVSDRNPE--AIADVIAAGA----ET---ASTAKAIAEQCDVIITML   64 (161)
T ss_dssp             CEEEEECC-STTHHHHHHHHHHTTC--EEEEECSCHH--HHHHHHHTTC----EE---CSSHHHHHHHCSEEEECC
T ss_pred             CEEEEEeh-hHHHHHHHHHHHHCCC--eEEEEeCCcc--hhHHHHHhhh----hh---cccHHHHHhCCCeEEEEc
Confidence            79999999 9999999999999998  9999999752  1222333221    11   235678899999999984

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=97.91  E-value=2.5e-05  Score=70.44  Aligned_cols=167  Identities=14%  Similarity=0.025  Sum_probs=97.9

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCC-CcH---Hhhh--CCCcEEEE
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQ-PQL---ENAL--TGMDLVII  116 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~-~d~---~~al--~~aDvVIi  116 (354)
                      +||.|+||+|++|++++..|+.+|+  +|+.+|+.........+.+....+.++.+... .|.   .+.+  ...+++++
T Consensus         1 k~vLItG~tGfiG~~l~~~Ll~~g~--~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~~   78 (321)
T d1rpna_           1 RSALVTGITGQDGAYLAKLLLEKGY--RVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMADACSVQRAVIKAQPQEVYN   78 (321)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC--EEEEEECCCSSCCCHHHHHTTCGGGEEEEECCTTCHHHHHHHHHHHCCSEEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcC--EEEEEECCCCcccHHHHHHhcccCCcEEEEccccChHHhhhhhcccccccccc
Confidence            3899999999999999999999998  99999987521111223332222334433211 222   1222  24566777


Q ss_pred             cCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecC------CCCCchHHHHHHHHHhCCCCCCCEEEec
Q 018512          117 PAGVPRKP--GMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISN------PVNSTVPIAAEVFKKAGTYDPKKLLGVT  188 (354)
Q Consensus       117 ~ag~~~~~--g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tN------Pv~~~~~~~~~~~~~~~~~p~~kviG~t  188 (354)
                      +++.....  .....+.+..|+....++.+.++++.+..+++..|.      +.+...       .+.+-+.+...+|.+
T Consensus        79 ~a~~~~~~~~~~~~~~~~~~n~~g~~~~l~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~-------~E~~~~~p~~~Y~~s  151 (321)
T d1rpna_          79 LAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQASTSEMFGLIQAERQ-------DENTPFYPRSPYGVA  151 (321)
T ss_dssp             CCSCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTSEEEEEEEGGGGCSCSSSSB-------CTTSCCCCCSHHHHH
T ss_pred             ccccccccccccchHHHHhhhhhchHHHHHHHHHhCCCcccccccchhhcCcccCCCC-------CCCCCccccChhHHH
Confidence            66543211  123456678899999999999999987766665531      111000       011112233445666


Q ss_pred             cchHHHHHHHHHHHhCCCCCCCc-ceEEeec
Q 018512          189 MLDVVRANTFVAEVLGLDPRDVD-VPVVGGH  218 (354)
Q Consensus       189 ~ld~~r~~~~la~~l~v~~~~v~-~~v~G~h  218 (354)
                      .+...++...+++..+++...++ +.++|..
T Consensus       152 K~~~E~~~~~~~~~~~~~~~~lr~~~vyGp~  182 (321)
T d1rpna_         152 KLYGHWITVNYRESFGLHASSGILFNHESPL  182 (321)
T ss_dssp             HHHHHHHHHHHHHHHCCCEEEEEECCEECTT
T ss_pred             HHHHHHHHHHHHhhcCCcEEEEEEecccCCC
Confidence            56566666677777787654443 3466643

>d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Aquifex aeolicus [TaxId: 63363]

Probab=97.87  E-value=6.2e-05  Score=61.91  Aligned_cols=95  Identities=17%  Similarity=0.185  Sum_probs=60.0

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC-chhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcCCCC
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN-TPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVP  121 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~-~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~ag~~  121 (354)
                      +||+|||+ |.+|.++|..|...++..+|+.+|+++ ....+.+...    .. ...  +........++|+||++..  
T Consensus         2 k~I~IIG~-G~mG~sla~~L~~~g~~~~I~~~D~~~~~~~~a~~~~~----~~-~~~--~~~~~~~~~~~dlIila~p--   71 (171)
T d2g5ca2           2 QNVLIVGV-GFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGI----ID-EGT--TSIAKVEDFSPDFVMLSSP--   71 (171)
T ss_dssp             CEEEEESC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTS----CS-EEE--SCGGGGGGTCCSEEEECSC--
T ss_pred             CEEEEEcc-CHHHHHHHHHHHhcCCCeEEEEEECChHHHHHHHHhhc----ch-hhh--hhhhhhhccccccccccCC--
Confidence            47999998 999999999999998767999999976 2222222211    11 111  1122345579999999842  


Q ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecCC
Q 018512          122 RKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNP  161 (354)
Q Consensus       122 ~~~g~~r~d~~~~n~~~~~~i~~~i~~~~-p~a~viv~tNP  161 (354)
                                    ...+.++.+.+..+. ++.+|+-++..
T Consensus        72 --------------~~~~~~vl~~l~~~~~~~~ii~d~~s~   98 (171)
T d2g5ca2          72 --------------VRTFREIAKKLSYILSEDATVTDQGSV   98 (171)
T ss_dssp             --------------HHHHHHHHHHHHHHSCTTCEEEECCSC
T ss_pred             --------------chhhhhhhhhhhccccccccccccccc
Confidence                          123444555555544 67777665543

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=97.86  E-value=7.1e-06  Score=70.05  Aligned_cols=108  Identities=11%  Similarity=0.077  Sum_probs=70.5

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCC-Cc-HHhhhCCCcEEEEcCC
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQ-PQ-LENALTGMDLVIIPAG  119 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~-~d-~~~al~~aDvVIi~ag  119 (354)
                      ++||+|+||+|++|++++..|+..+...+|+...+++..       .   .+.+...... .+ ......+.|.||+++|
T Consensus         2 ~KkIlItGatG~iG~~lv~~L~~~~~~~~v~~~~r~~~~-------~---~~~~~~~~~d~~~~~~~~~~~~d~vi~~~g   71 (212)
T d2a35a1           2 PKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA-------E---HPRLDNPVGPLAELLPQLDGSIDTAFCCLG   71 (212)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC-------C---CTTEECCBSCHHHHGGGCCSCCSEEEECCC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEEEeCCchh-------h---cccccccccchhhhhhccccchheeeeeee
Confidence            359999999999999999999999875567666554311       0   1111111000 01 1233356899999987


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 018512          120 VPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  159 (354)
Q Consensus       120 ~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~t  159 (354)
                      ..........++...|+....++++..++...+.++.+.+
T Consensus        72 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~v~~~i~~Ss  111 (212)
T d2a35a1          72 TTIKEAGSEEAFRAVDFDLPLAVGKRALEMGARHYLVVSA  111 (212)
T ss_dssp             CCHHHHSSHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECC
T ss_pred             eeccccccccccccchhhhhhhcccccccccccccccccc
Confidence            6543333455677888999999999998876666555443

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.76  E-value=2.2e-05  Score=71.54  Aligned_cols=167  Identities=13%  Similarity=0.042  Sum_probs=97.2

Q ss_pred             CeE-EEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc---hhHHHHHhcC-C--CCCeEEEEeCC-Cc---HHhhh--C
Q 018512           43 FKV-AILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT---PGVTADISHM-D--TGAVVRGFLGQ-PQ---LENAL--T  109 (354)
Q Consensus        43 ~kI-~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~---~g~~~dl~~~-~--~~~~v~~~~~~-~d---~~~al--~  109 (354)
                      +|| .|+||+|++|++++..|+..|+  +|+.+|+...   .+...++... .  ....++.+... .|   +..++  .
T Consensus         1 kKI~LVTG~tGfIG~~l~~~Ll~~g~--~V~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~   78 (347)
T d1t2aa_           1 RNVALITGITGQDGSYLAEFLLEKGY--EVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEV   78 (347)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCEEEEecCCcHHHHHHHHHHHHCcC--EEEEEECCCcccchhhHHHHhhchhhhccCCcEEEEeecCCchhhHHHHhhc
Confidence            489 7999999999999999999998  9999998641   1111111111 0  11233433211 12   23333  3


Q ss_pred             CCcEEEEcCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHhhhCC-C-eEEEEec------CCCCCchHHHHHHHHHhCCC
Q 018512          110 GMDLVIIPAGVPRKP--GMTRDDLFNINAGIVRTLCEGIAKCCP-N-ATVNLIS------NPVNSTVPIAAEVFKKAGTY  179 (354)
Q Consensus       110 ~aDvVIi~ag~~~~~--g~~r~d~~~~n~~~~~~i~~~i~~~~p-~-a~viv~t------NPv~~~~~~~~~~~~~~~~~  179 (354)
                      +.|+|++.++.....  .....+++..|+....++.+.+++++. + ..++.+|      +|-....       .....+
T Consensus        79 ~~~~v~~~~a~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~-------~E~~~~  151 (347)
T d1t2aa_          79 KPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQASTSELYGKVQEIPQ-------KETTPF  151 (347)
T ss_dssp             CCSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGTCSCSSSSB-------CTTSCC
T ss_pred             ccceeeeeeeccccchhhccchhhhhhHHHHHHHHHHHHHHcCCCCCcEEEEecchheecCCCCCCC-------CCCCCC
Confidence            556788776544211  123456678899999999999998763 2 4455544      1111100       111223


Q ss_pred             CCCCEEEeccchHHHHHHHHHHHhCCCCCCCc-ceEEeec
Q 018512          180 DPKKLLGVTMLDVVRANTFVAEVLGLDPRDVD-VPVVGGH  218 (354)
Q Consensus       180 p~~kviG~t~ld~~r~~~~la~~l~v~~~~v~-~~v~G~h  218 (354)
                      .|...+|.+.+...++...+++..+++...++ ..++|..
T Consensus       152 ~P~~~Yg~sK~~aE~~~~~~~~~~~~~~~ilr~~~vyGp~  191 (347)
T d1t2aa_         152 YPRSPYGAAKLYAYWIVVNFREAYNLFAVNGILFNHESPR  191 (347)
T ss_dssp             CCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTT
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCEEEEEecceeCCC
Confidence            34556777766667777777788887654443 4567754

>d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=97.75  E-value=7.3e-05  Score=61.36  Aligned_cols=65  Identities=22%  Similarity=0.381  Sum_probs=49.3

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcC
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA  118 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~a  118 (354)
                      ++||.+||. |.+|+.+|..|...++  +|..||++...  ..++.....   ..    ..+..++++++|+|+++.
T Consensus         1 M~kIg~IGl-G~MG~~iA~~L~~~g~--~v~~~d~~~~~--~~~~~~~~~---~~----~~~~~e~~~~~diii~~v   65 (162)
T d3cuma2           1 MKQIAFIGL-GHMGAPMATNLLKAGY--LLNVFDLVQSA--VDGLVAAGA---SA----ARSARDAVQGADVVISML   65 (162)
T ss_dssp             CCEEEEECC-STTHHHHHHHHHHTTC--EEEEECSSHHH--HHHHHHTTC---EE----CSSHHHHHTSCSEEEECC
T ss_pred             CCEEEEEEE-HHHHHHHHHHHHHCCC--eEEEEECchhh--hhhhhhhhc---cc----cchhhhhccccCeeeecc
Confidence            469999999 9999999999999998  99999987522  233333321   11    235678999999999974

>d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Streptococcus pyogenes [TaxId: 1314]

Probab=97.73  E-value=2.5e-05  Score=63.74  Aligned_cols=64  Identities=19%  Similarity=0.294  Sum_probs=46.9

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhc-CCCCCeEEEEeCCCcHHhhhCCCcEEEEcC
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISH-MDTGAVVRGFLGQPQLENALTGMDLVIIPA  118 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~-~~~~~~v~~~~~~~d~~~al~~aDvVIi~a  118 (354)
                      |||+|||+ |++|++++..|+..+.  ++.++|++...  ..++.. ...    .   ...+..+++++||+||++.
T Consensus         1 MkIg~IG~-G~mG~al~~~l~~~~~--~i~v~~r~~~~--~~~l~~~~g~----~---~~~~~~~~~~~~dvIilav   65 (152)
T d2ahra2           1 MKIGIIGV-GKMASAIIKGLKQTPH--ELIISGSSLER--SKEIAEQLAL----P---YAMSHQDLIDQVDLVILGI   65 (152)
T ss_dssp             CEEEEECC-SHHHHHHHHHHTTSSC--EEEEECSSHHH--HHHHHHHHTC----C---BCSSHHHHHHTCSEEEECS
T ss_pred             CEEEEEec-cHHHHHHHHHHHhCCC--eEEEEcChHHh--HHhhccccce----e---eechhhhhhhccceeeeec
Confidence            89999999 9999999999988876  99999987521  122211 111    1   1245678899999999985

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.73  E-value=4.7e-05  Score=69.52  Aligned_cols=112  Identities=19%  Similarity=0.091  Sum_probs=69.8

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--------chhHHHHHhcCCCCCeEEEEeCC-Cc---HHhhhCC
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--------TPGVTADISHMDTGAVVRGFLGQ-PQ---LENALTG  110 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--------~~g~~~dl~~~~~~~~v~~~~~~-~d---~~~al~~  110 (354)
                      .||.|+||+|++|++++..|+..|+  +|+.+|...        .......+.... ...++.+... .|   +++++.+
T Consensus         3 kKILITG~tGfIGs~lv~~Ll~~g~--~V~~ld~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~d~~~l~~~~~~   79 (346)
T d1ek6a_           3 EKVLVTGGAGYIGSHTVLELLEAGY--LPVVIDNFHNAFRGGGSLPESLRRVQELT-GRSVEFEEMDILDQGALQRLFKK   79 (346)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHTTC--CEEEEECSSSSCBCSSSSBHHHHHHHHHH-TCCCEEEECCTTCHHHHHHHHHH
T ss_pred             CeEEEECCCcHHHHHHHHHHHHCcC--EEEEEECCCccccccccchHHHHHHHHhc-CCCcEEEEeeccccccccccccc
Confidence            3899999999999999999999998  899998532        111111111111 1222222111 22   3444544


Q ss_pred             C--cEEEEcCCCCCCCC--CCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEE
Q 018512          111 M--DLVIIPAGVPRKPG--MTRDDLFNINAGIVRTLCEGIAKCCPNATVNL  157 (354)
Q Consensus       111 a--DvVIi~ag~~~~~g--~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv  157 (354)
                      .  |+|+++|+.+....  ....+.+..|+....++...+++++.+.++..
T Consensus        80 ~~~~~i~h~Aa~~~~~~~~~~p~~~~~~Nv~gt~~l~~~~~~~~v~~~i~~  130 (346)
T d1ek6a_          80 YSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHGVKNLVFS  130 (346)
T ss_dssp             CCEEEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred             cccccccccccccCcHhhHhCHHHHHHhhhcccccccchhhhcCccccccc
Confidence            4  46777887542110  12456678899999999999999887665544

>d1dlja2 c.2.1.6 (A:1-196) UDP-glucose dehydrogenase (UDPGDH) {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: UDP-glucose dehydrogenase (UDPGDH)
species: Streptococcus pyogenes [TaxId: 1314]

Probab=97.73  E-value=3.2e-05  Score=65.43  Aligned_cols=108  Identities=18%  Similarity=0.243  Sum_probs=63.5

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCC--------------CCCeEEEEeCCCcHHhhh
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMD--------------TGAVVRGFLGQPQLENAL  108 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~--------------~~~~v~~~~~~~d~~~al  108 (354)
                      |||+|||. |+||..+|..+ ..|+  +|+.+|+++.  .+..|....              .......   +.+...+.
T Consensus         1 MkI~ViGl-G~vGl~~a~~~-a~g~--~V~g~Din~~--~v~~l~~g~~p~~e~~l~~~~~~~~~~~~~---~~~~~~~~   71 (196)
T d1dlja2           1 MKIAVAGS-GYVGLSLGVLL-SLQN--EVTIVDILPS--KVDKINNGLSPIQDEYIEYYLKSKQLSIKA---TLDSKAAY   71 (196)
T ss_dssp             CEEEEECC-SHHHHHHHHHH-TTTS--EEEEECSCHH--HHHHHHTTCCSSCCHHHHHHHHHSCCCEEE---ESCHHHHH
T ss_pred             CEEEEECC-ChhHHHHHHHH-HCCC--cEEEEECCHH--HHHHHhhcccccchhhHHHHhhhhhhhhhc---cchhhhhh
Confidence            89999998 99999998766 4677  9999999861  111111110              0112222   23456778


Q ss_pred             CCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEe-cCCCCC
Q 018512          109 TGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLI-SNPVNS  164 (354)
Q Consensus       109 ~~aDvVIi~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~-tNPv~~  164 (354)
                      .++|+++++...|........     ....+....+.+....+...+++- |-|.+.
T Consensus        72 ~~~~ii~v~vpt~~~~~~~~~-----~~~~v~~~~~~~~~~~~~~~iii~Stv~pgt  123 (196)
T d1dlja2          72 KEAELVIIATPTNYNSRINYF-----DTQHVETVIKEVLSVNSHATLIIKSTIPIGF  123 (196)
T ss_dssp             HHCSEEEECCCCCEETTTTEE-----CCHHHHHHHHHHHHHCSSCEEEECSCCCTTH
T ss_pred             hccccccccCCccccccCCCc-----ceeEEeehhhhhhhcccceeEEeeeecCcee
Confidence            999999998766643221111     123444555555556666655544 344443

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.69  E-value=5.7e-05  Score=64.01  Aligned_cols=113  Identities=15%  Similarity=0.023  Sum_probs=68.1

Q ss_pred             CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEE-EeCCCcHHhhhCCCcEEEEcCC
Q 018512           41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRG-FLGQPQLENALTGMDLVIIPAG  119 (354)
Q Consensus        41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~-~~~~~d~~~al~~aDvVIi~ag  119 (354)
                      .+.+|.|+||+|++|++++..|+.+|+...++.+++++.  ...++....  ..+.. .....++.++++++|.||++++
T Consensus         2 ~~~tVlVtGatG~iG~~l~~~Ll~~g~~v~v~~~~R~~~--~~~~~~~~~--~~~~~d~~~~~~~~~~~~~~d~vi~~a~   77 (252)
T d2q46a1           2 NLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQ--GKEKIGGEA--DVFIGDITDADSINPAFQGIDALVILTS   77 (252)
T ss_dssp             SCCEEEEESTTSTTHHHHHHHHHHTTTTCEEEEEESCHH--HHHHTTCCT--TEEECCTTSHHHHHHHHTTCSEEEECCC
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCCcEEEEEEcCCHH--HHHhccCCc--EEEEeeeccccccccccccceeeEEEEe
Confidence            356999999999999999999999987334544544431  112222111  11111 1111345678999999999887


Q ss_pred             CCCCC---------------CCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEE
Q 018512          120 VPRKP---------------GMTRDDLFNINAGIVRTLCEGIAKCCPNATVNL  157 (354)
Q Consensus       120 ~~~~~---------------g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv  157 (354)
                      .....               ..........|+...+.++..............
T Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  130 (252)
T d2q46a1          78 AVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAGVKHIVVV  130 (252)
T ss_dssp             CCCEECTTCCTTSCCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHTCSEEEEE
T ss_pred             eccccccccchhhhhhcccccccchhhhccccccceeeccccccccccccccc
Confidence            53210               011223445677788888888777765554443

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.66  E-value=0.00058  Score=60.09  Aligned_cols=160  Identities=15%  Similarity=0.179  Sum_probs=94.3

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCCCCeEEEEeC-CCc----------HHhhhC
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLG-QPQ----------LENALT  109 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~~~~v~~~~~-~~d----------~~~al~  109 (354)
                      +.+.|+||++.+|..+|..|+..|.  .|++.|+++  .+..+.++........+..+.. -++          ..+.+.
T Consensus        11 Kv~lITGas~GIG~aiA~~la~~G~--~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~v~~~~~~~g   88 (257)
T d1xg5a_          11 RLALVTGASGGIGAAVARALVQQGL--KVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQHS   88 (257)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHhcCCCceEEEEEccCCCHHHHHHHHHHHHHhcC
Confidence            4689999999999999999999998  899999986  3344455554432233333211 122          123456


Q ss_pred             CCcEEEEcCCCCCCC---CCCH---HHHHHHH----HHHHHHHHHHHhhhC-CCeEEEEecCCCCCchHHHHHHHHHhCC
Q 018512          110 GMDLVIIPAGVPRKP---GMTR---DDLFNIN----AGIVRTLCEGIAKCC-PNATVNLISNPVNSTVPIAAEVFKKAGT  178 (354)
Q Consensus       110 ~aDvVIi~ag~~~~~---g~~r---~d~~~~n----~~~~~~i~~~i~~~~-p~a~viv~tNPv~~~~~~~~~~~~~~~~  178 (354)
                      .-|++|+.||.....   ..+.   ...+..|    +-..+.+++.+++.. ..+.||+++-.....            +
T Consensus        89 ~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~------------~  156 (257)
T d1xg5a_          89 GVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHR------------V  156 (257)
T ss_dssp             CCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTS------------C
T ss_pred             CCCEEEecccccCCCccccccHHHHHhhhhhhhhHHHHHHHHHHHHHHHhccCCCceEEEechHhcC------------C
Confidence            789999999865321   1222   2233444    455667777777765 467777776433211            1


Q ss_pred             CCCC--CEEEeccchHHHHHHHHHHHhCCCCCCCcceEEe
Q 018512          179 YDPK--KLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVVG  216 (354)
Q Consensus       179 ~p~~--kviG~t~ld~~r~~~~la~~l~v~~~~v~~~v~G  216 (354)
                      .|..  -.++.+.-.-..|.+.+|..|.-.+..|++.++.
T Consensus       157 ~p~~~~~~Y~~sKaal~~ltr~la~el~~~~~~I~vn~i~  196 (257)
T d1xg5a_         157 LPLSVTHFYSATKYAVTALTEGLRQELREAQTHIRATCIS  196 (257)
T ss_dssp             CSCGGGHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEE
T ss_pred             CCCcccHHHHHHHHHHHhCHHHHHHHHHhCCCCEEEEEEe
Confidence            1111  1122222223456677777775455667665554

>d1s6ya2 d.162.1.2 (A:173-445) 6-phospho-beta-glucosidase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: AglA-like glucosidase
domain: 6-phospho-beta-glucosidase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=97.63  E-value=0.00016  Score=64.47  Aligned_cols=74  Identities=12%  Similarity=0.057  Sum_probs=58.5

Q ss_pred             HHHHHHHHHHHhccCCCCcEEEeeee-eccC---CCccEEEEeEEEcCCCeEEeccCCCCCHHHHHHHHHHHHHHHHHHH
Q 018512          271 YAAVKFADACLRGLRGDAGVVECAFV-ASQV---TELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSIQ  346 (354)
Q Consensus       271 ~a~~~ii~si~~~~~~~~~v~~~~~~-~g~~---~~~~~~svPv~ig~~Gv~~i~~~~~L~~~E~~~l~~sa~~i~~~~~  346 (354)
                      ..+++++++|.+|.+.   ++.+++. +|.+   |+|+++++||+|+++|+.++.. ++|++..++++......-+-.++
T Consensus       146 e~a~~ii~ai~~~~~~---~~~vNv~N~G~I~nLp~d~vVEVp~~V~~~Gi~P~~~-g~lP~~~~~Li~~~~~~e~L~ve  221 (270)
T d1s6ya2         146 DAACSLISSIYNDKRD---IQPVNTRNNGAIASISAESAVEVNCVITKDGPKPIAV-GDLPVAVRGLVQQIKSFERVAAE  221 (270)
T ss_dssp             HHHHHHHHHHHHTCCC---EEEEEEECTTSBTTSCTTSEEEEEEEEETTEEEECCC-BCCCHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhcCCCe---EEEEECCCCCcCCCCCccceEEEEEEEECCceEeeec-CCCcHHHHHHHHHHHHHHHHHHH
Confidence            7889999999999863   5555554 6775   8899999999999999999866 69999999988776554444444


Q ss_pred             Hh
Q 018512          347 KG  348 (354)
Q Consensus       347 ~~  348 (354)
                      .+
T Consensus       222 Aa  223 (270)
T d1s6ya2         222 AA  223 (270)
T ss_dssp             HH
T ss_pred             HH
Confidence            44

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

Probab=97.59  E-value=1.4e-05  Score=70.71  Aligned_cols=93  Identities=15%  Similarity=0.175  Sum_probs=61.5

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhC--CCcEEEEcCCC
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALT--GMDLVIIPAGV  120 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~--~aDvVIi~ag~  120 (354)
                      |||.|+||+|++|++++..|...+   +++.+|.+... ...|+.            ...++++.++  +.|+||++|+.
T Consensus         1 MKILItG~tGfiG~~l~~~L~~~g---~~v~~~~~~~~-~~~Dl~------------~~~~~~~~i~~~~~D~Vih~Aa~   64 (298)
T d1n2sa_           1 MNILLFGKTGQVGWELQRSLAPVG---NLIALDVHSKE-FCGDFS------------NPKGVAETVRKLRPDVIVNAAAH   64 (298)
T ss_dssp             CEEEEECTTSHHHHHHHHHTTTTS---EEEEECTTCSS-SCCCTT------------CHHHHHHHHHHHCCSEEEECCCC
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCC---CEEEEECCCcc-ccCcCC------------CHHHHHHHHHHcCCCEEEEeccc
Confidence            899999999999999999888776   45666765411 001111            1112345554  45999999985


Q ss_pred             CCC--CCCCHHHHHHHHHHHHHHHHHHHhhhCC
Q 018512          121 PRK--PGMTRDDLFNINAGIVRTLCEGIAKCCP  151 (354)
Q Consensus       121 ~~~--~g~~r~d~~~~n~~~~~~i~~~i~~~~p  151 (354)
                      ...  ...........|+.....+.+..++.+.
T Consensus        65 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~   97 (298)
T d1n2sa_          65 TAVDKAESEPELAQLLNATSVEAIAKAANETGA   97 (298)
T ss_dssp             CCHHHHTTCHHHHHHHHTHHHHHHHHHHTTTTC
T ss_pred             ccccccccCccccccccccccccchhhhhcccc
Confidence            421  1233445667888999999998887653

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=97.57  E-value=3.4e-05  Score=67.84  Aligned_cols=89  Identities=21%  Similarity=0.209  Sum_probs=59.7

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhC--CCcEEEEcCCC
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALT--GMDLVIIPAGV  120 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~--~aDvVIi~ag~  120 (354)
                      |||.|+||+|++|++++..|..+|+  +|+.+|+.+.     |+.+.            .++++.++  +.|+||++++.
T Consensus         2 MKIlItGasGfiG~~l~~~L~~~g~--~Vi~~~r~~~-----D~~d~------------~~~~~~l~~~~~d~vih~a~~   62 (281)
T d1vl0a_           2 MKILITGANGQLGREIQKQLKGKNV--EVIPTDVQDL-----DITNV------------LAVNKFFNEKKPNVVINCAAH   62 (281)
T ss_dssp             EEEEEESTTSHHHHHHHHHHTTSSE--EEEEECTTTC-----CTTCH------------HHHHHHHHHHCCSEEEECCCC
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCC--EEEEeechhc-----cCCCH------------HHHHHHHHHcCCCEEEeeccc
Confidence            8999999999999999999998888  9999998641     11111            12234443  66999998775


Q ss_pred             CCCCC--CCHHHHHHHHHHHHHHHHHHHhhhC
Q 018512          121 PRKPG--MTRDDLFNINAGIVRTLCEGIAKCC  150 (354)
Q Consensus       121 ~~~~g--~~r~d~~~~n~~~~~~i~~~i~~~~  150 (354)
                      .....  .........|......+.+......
T Consensus        63 ~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~   94 (281)
T d1vl0a_          63 TAVDKCEEQYDLAYKINAIGPKNLAAAAYSVG   94 (281)
T ss_dssp             CCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHT
T ss_pred             cccccccccchhhccccccccccccccccccc
Confidence            42111  1223445567777777766666554

>d1up7a2 d.162.1.2 (A:163-415) 6-phospho-beta-glucosidase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: AglA-like glucosidase
domain: 6-phospho-beta-glucosidase
species: Thermotoga maritima [TaxId: 2336]

Probab=97.57  E-value=0.00029  Score=62.19  Aligned_cols=81  Identities=10%  Similarity=-0.024  Sum_probs=60.5

Q ss_pred             CCcchhhHHHHHHHHHHHHHhccCCCCcEEEeee-eeccC---CCccEEEEeEEEcCCCeEEeccCCCCCHHHHHHHHHH
Q 018512          262 AGSATLSMAYAAVKFADACLRGLRGDAGVVECAF-VASQV---TELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKA  337 (354)
Q Consensus       262 kg~~~~s~A~a~~~ii~si~~~~~~~~~v~~~~~-~~g~~---~~~~~~svPv~ig~~Gv~~i~~~~~L~~~E~~~l~~s  337 (354)
                      ++...|+  ..+++++++|.+|.+.   ++.+++ .+|.+   |+|+++++||+|+++|+.++.- ++|++...++++.-
T Consensus       127 ~~~~~~~--e~a~~ii~ai~~~~~~---~~~vNv~N~G~I~~Lp~d~vVEVp~~V~~~Gi~P~~~-g~lP~~~~~Li~~~  200 (253)
T d1up7a2         127 RGGSMYS--TAAAHLIRDLETDEGK---IHIVNTRNNGSIENLPDDYVLEIPCYVRSGRVHTLSQ-GKGDHFALSFIHAV  200 (253)
T ss_dssp             STTTTHH--HHHHHHHHHHHSSSCE---EEEEEEECTTSSTTSCTTCEEEEEEEEETTEEEEBCC-CCCCHHHHHHHHHH
T ss_pred             ccCcchH--HHHHHHHHHHHcCCCc---EEEEeCCCcCcCCCCChhhheEEEEEecCCccccccc-CCCcHHHHHHHHHH
Confidence            3445555  7789999999999763   555555 46775   8899999999999999999866 69999988887664


Q ss_pred             HHHHHHHHHHh
Q 018512          338 KKELAGSIQKG  348 (354)
Q Consensus       338 a~~i~~~~~~~  348 (354)
                      ...-+-.++.+
T Consensus       201 ~~~e~L~veA~  211 (253)
T d1up7a2         201 KMYERLTIEAY  211 (253)
T ss_dssp             HHHHHHHHHHH
T ss_pred             HHHHHHHHHHH
Confidence            44333344433

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=97.54  E-value=0.00013  Score=57.67  Aligned_cols=97  Identities=23%  Similarity=0.243  Sum_probs=59.4

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhc-CCCCCeEEEEeCCCc---HH-hhhCCCcEEEEc
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISH-MDTGAVVRGFLGQPQ---LE-NALTGMDLVIIP  117 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~-~~~~~~v~~~~~~~d---~~-~al~~aDvVIi~  117 (354)
                      |||.|+|+ |.+|+.++..|...|+  +++++|.++..  +.++.. ... ..+.+  +.++   ++ ..+++||.++.+
T Consensus         1 M~IvI~G~-G~~G~~la~~L~~~g~--~v~vid~d~~~--~~~~~~~~~~-~vi~G--d~~~~~~l~~~~i~~a~~vv~~   72 (132)
T d1lssa_           1 MYIIIAGI-GRVGYTLAKSLSEKGH--DIVLIDIDKDI--CKKASAEIDA-LVING--DCTKIKTLEDAGIEDADMYIAV   72 (132)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTC--EEEEEESCHHH--HHHHHHHCSS-EEEES--CTTSHHHHHHTTTTTCSEEEEC
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCC--CcceecCChhh--hhhhhhhhhh-hhccC--cccchhhhhhcChhhhhhhccc
Confidence            89999999 9999999999999998  99999998621  112221 111 11221  1222   22 236899999987


Q ss_pred             CCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCC
Q 018512          118 AGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPV  162 (354)
Q Consensus       118 ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv  162 (354)
                      ...         |  ..|+...    ...++++++.+|..+.+|.
T Consensus        73 t~~---------d--~~N~~~~----~~~k~~~~~~iI~~~~~~~  102 (132)
T d1lssa_          73 TGK---------E--EVNLMSS----LLAKSYGINKTIARISEIE  102 (132)
T ss_dssp             CSC---------H--HHHHHHH----HHHHHTTCCCEEEECSSTT
T ss_pred             CCc---------H--HHHHHHH----HHHHHcCCceEEEEecCHH
Confidence            321         1  3454222    2344567776665566665

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

Probab=97.53  E-value=7.4e-05  Score=63.00  Aligned_cols=81  Identities=15%  Similarity=0.161  Sum_probs=55.9

Q ss_pred             CCCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCCCCeEEE-EeCCCcHHhhhCCCcEEE
Q 018512           39 GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRG-FLGQPQLENALTGMDLVI  115 (354)
Q Consensus        39 ~~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~~~~v~~-~~~~~d~~~al~~aDvVI  115 (354)
                      +-+.++|.|+||+|.+|..++..|++.|.  +|+++|++.  .......+........... .....+.++++.++|+||
T Consensus        20 ~l~gK~vlItGasgGIG~~ia~~la~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~iDili   97 (191)
T d1luaa1          20 SVKGKKAVVLAGTGPVGMRSAALLAGEGA--EVVLCGRKLDKAQAAADSVNKRFKVNVTAAETADDASRAEAVKGAHFVF   97 (191)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCSHHHHHHHTTTCSEEE
T ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHhhcc--chhhcccchHHHHHHHHHHHhccchhhhhhhcccHHHHHHHhcCcCeee
Confidence            55667999999999999999999999997  899999986  2222222221111011111 222245678899999999


Q ss_pred             EcCCCC
Q 018512          116 IPAGVP  121 (354)
Q Consensus       116 i~ag~~  121 (354)
                      .++|.+
T Consensus        98 n~Ag~g  103 (191)
T d1luaa1          98 TAGAIG  103 (191)
T ss_dssp             ECCCTT
T ss_pred             ecCccc
Confidence            998864

>d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Conserved hypothetical protein MTH1747
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=97.50  E-value=5.9e-05  Score=61.19  Aligned_cols=64  Identities=17%  Similarity=0.192  Sum_probs=46.1

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcC
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA  118 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~a  118 (354)
                      |||+|||. |.+|+.++..|.+.++  ++..+|.+....... ......   +.     .+..+++++||+||++.
T Consensus         1 MkIgiIG~-G~mG~~ia~~l~~~g~--~v~~~~~~~~~~~~~-~~~~~~---~~-----~~~~e~~~~~diIi~~v   64 (152)
T d1i36a2           1 LRVGFIGF-GEVAQTLASRLRSRGV--EVVTSLEGRSPSTIE-RARTVG---VT-----ETSEEDVYSCPVVISAV   64 (152)
T ss_dssp             CEEEEESC-SHHHHHHHHHHHHTTC--EEEECCTTCCHHHHH-HHHHHT---CE-----ECCHHHHHTSSEEEECS
T ss_pred             CEEEEEcH-HHHHHHHHHHHHHCCC--eEEEEcCchhHHHHH-hhhccc---cc-----ccHHHHHhhcCeEEEEe
Confidence            79999999 9999999999999998  899999776322111 111110   11     12368899999999984

>d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Trypanosoma brucei [TaxId: 5691]

Probab=97.50  E-value=0.0001  Score=61.13  Aligned_cols=74  Identities=12%  Similarity=0.206  Sum_probs=47.0

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchh--HHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcC
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPG--VTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA  118 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g--~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~a  118 (354)
                      .|||.|||. |.+|+.++..|+..++  +|+.||+++.+.  ...........+.........++...+..++.++...
T Consensus         1 ~MkIGvIGl-G~MG~~ma~~L~~~G~--~V~~~dr~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (178)
T d1pgja2           1 SMDVGVVGL-GVMGANLALNIAEKGF--KVAVFNRTYSKSEEFMKANASAPFAGNLKAFETMEAFAASLKKPRKALILV   76 (178)
T ss_dssp             CBSEEEECC-SHHHHHHHHHHHHTTC--CEEEECSSHHHHHHHHHHTTTSTTGGGEEECSCHHHHHHHBCSSCEEEECC
T ss_pred             CCEEEEEee-hHHHHHHHHHHHHCCC--eEEEEECCHHHHHHHHHcCCccccccchhhhhhhhHHHHhcccceEEEEee
Confidence            489999999 9999999999999998  999999976222  2222121111222333211123345566777777763

>d1mb4a1 c.2.1.3 (A:1-132,A:355-369) Aspartate beta-semialdehyde dehydrogenase {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Vibrio cholerae [TaxId: 666]

Probab=97.46  E-value=0.00017  Score=58.34  Aligned_cols=112  Identities=11%  Similarity=0.137  Sum_probs=68.9

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCC--CCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcCCC
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINP--LVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGV  120 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~--~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~ag~  120 (354)
                      |||+|+||+|++|+-+...|....  ...++.++......+...++.  .....+..   ..+ .+.++++|+||++.+ 
T Consensus         1 mKVaIiGATGyvG~eLi~lLl~~~~~p~~~i~~~ss~~~~gk~~~~~--~~~~~~~~---~~~-~~~~~~~DvvF~alp-   73 (147)
T d1mb4a1           1 MRVGLVGWRGMVGSVLMQRMVEERDFDLIEPVFFSTSQIGVPAPNFG--KDAGMLHD---AFD-IESLKQLDAVITCQG-   73 (147)
T ss_dssp             CEEEEESCSSHHHHHHHHHHHHTTGGGGSEEEEEESSCCSSBCCCSS--SCCCBCEE---TTC-HHHHTTCSEEEECSC-
T ss_pred             CEEEEECCccHHHHHHHHHHHhcCCCCceEEEEeccccccccccccC--Ccceeeec---ccc-hhhhccccEEEEecC-
Confidence            799999999999999998776543  245888776654222211111  00111111   223 466899999999852 


Q ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCCchHHHHHHHHHhCCCCCCCEEEeccch
Q 018512          121 PRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLD  191 (354)
Q Consensus       121 ~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~~~~~~~~~~p~~kviG~t~ld  191 (354)
                                     -..-+++++.+.+.+.+.+||  .|-.|.             .++++-++++.-+.
T Consensus        74 ---------------~~~s~~~~~~l~~~g~~~~VI--DlSsdf-------------R~~~dvpl~lPEiN  114 (147)
T d1mb4a1          74 ---------------GSYTEKVYPALRQAGWKGYWI--DAASTL-------------RMDKEAIITLDPVN  114 (147)
T ss_dssp             ---------------HHHHHHHHHHHHHTTCCSEEE--ESSSTT-------------TTCTTEEEECHHHH
T ss_pred             ---------------chHHHHHhHHHHHcCCceEEE--eCCccc-------------cccCCceEEeCCcC
Confidence                           124568888888888777554  443332             35566677775433

>d1t4ba1 c.2.1.3 (A:1-133,A:355-367) Aspartate beta-semialdehyde dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=97.44  E-value=0.00018  Score=58.25  Aligned_cols=93  Identities=11%  Similarity=0.086  Sum_probs=58.1

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCC--CCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcCC
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINP--LVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG  119 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~--~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~ag  119 (354)
                      +.||+|+||+|.||+-+...|+...  ...+++++......+........  ...+..   ..+ .++++++|+||++++
T Consensus         1 MkkVaIvGATG~VGqeli~~Ll~~~~~p~~~l~~~~ss~s~g~~~~~~~~--~~~~~~---~~~-~~~~~~~DivF~a~~   74 (146)
T d1t4ba1           1 MQNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQLGQAAPSFGGT--TGTLQD---AFD-LEALKALDIIVTCQG   74 (146)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSSTTSBCCGGGTC--CCBCEE---TTC-HHHHHTCSEEEECSC
T ss_pred             CcEEEEECCccHHHHHHHHHHHhCCCCCeeEEEEeeccccccccccccCC--ceeeec---ccc-hhhhhcCcEEEEecC
Confidence            3599999999999999998777654  34688888765522211111111  111111   123 357899999999863


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEE
Q 018512          120 VPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVN  156 (354)
Q Consensus       120 ~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~vi  156 (354)
                                      ...-+++++.+.+.+.+.+||
T Consensus        75 ----------------~~~s~~~~~~~~~~g~~~~VI   95 (146)
T d1t4ba1          75 ----------------GDYTNEIYPKLRESGWQGYWI   95 (146)
T ss_dssp             ----------------HHHHHHHHHHHHHTTCCCEEE
T ss_pred             ----------------chHHHHhhHHHHhcCCCeecc
Confidence                            234566777777666666443

>d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Sheep (Ovis orientalis aries) [TaxId: 9940]

Probab=97.44  E-value=0.00021  Score=59.25  Aligned_cols=97  Identities=15%  Similarity=0.161  Sum_probs=60.9

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCC-CCeEEEEeCCCcHHhhhCCCcEEEEcCCCC
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDT-GAVVRGFLGQPQLENALTGMDLVIIPAGVP  121 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~-~~~v~~~~~~~d~~~al~~aDvVIi~ag~~  121 (354)
                      .+|.|||. |.+|+.+|..|+..|+  +|+.||+++.+  ..++..... ...........+..+++.++|.+|++....
T Consensus         3 ~nIg~IGl-G~MG~~mA~~L~~~G~--~V~v~dr~~~~--~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~ii~~~~~~   77 (176)
T d2pgda2           3 ADIALIGL-AVMGQNLILNMNDHGF--VVCAFNRTVSK--VDDFLANEAKGTKVLGAHSLEEMVSKLKKPRRIILLVKAG   77 (176)
T ss_dssp             BSEEEECC-SHHHHHHHHHHHHTTC--CEEEECSSTHH--HHHHHHTTTTTSSCEECSSHHHHHHHBCSSCEEEECSCTT
T ss_pred             CcEEEEeE-hHHHHHHHHHHHHCCC--eEEEEcCCHHH--HHHHHHhccccccccchhhhhhhhhhhcccceEEEecCch
Confidence            37999999 9999999999999998  89999998732  222322211 111222111235567889999999974211


Q ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEec
Q 018512          122 RKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLIS  159 (354)
Q Consensus       122 ~~~g~~r~d~~~~n~~~~~~i~~~i~~~~-p~a~viv~t  159 (354)
                                     +.+.++...+.... |..++|..|
T Consensus        78 ---------------~~v~~v~~~l~~~~~~g~iiid~s  101 (176)
T d2pgda2          78 ---------------QAVDNFIEKLVPLLDIGDIIIDGG  101 (176)
T ss_dssp             ---------------HHHHHHHHHHHHHCCTTCEEEECS
T ss_pred             ---------------HHHHHHHHHHHhccccCcEEEecC
Confidence                           23333444555444 556666654

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

Probab=97.41  E-value=0.00014  Score=63.90  Aligned_cols=157  Identities=16%  Similarity=0.067  Sum_probs=89.5

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCCCCeEEEEe-CCCcH----------Hhhh
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQL----------ENAL  108 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~~~~v~~~~-~~~d~----------~~al  108 (354)
                      .+.+.|+||++-+|..++..|+..|.  .|++.|+++  .+....++...   ..+..+. +-+|.          .+.+
T Consensus         6 gK~alVTGas~GIG~aia~~la~~Ga--~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~Dv~~~~~v~~~~~~~~~~~   80 (251)
T d1zk4a1           6 GKVAIITGGTLGIGLAIATKFVEEGA--KVMITGRHSDVGEKAAKSVGTP---DQIQFFQHDSSDEDGWTKLFDATEKAF   80 (251)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHCCT---TTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHhCCC---CcEEEEEccCCCHHHHHHHHHHHHHHh
Confidence            35788889999999999999999998  899999976  23333344321   1222221 11221          2345


Q ss_pred             CCCcEEEEcCCCCCCC---CCCHHH---HHHHH----HHHHHHHHHHHhhhCCCeEEEEecCCCCCchHHHHHHHHHhCC
Q 018512          109 TGMDLVIIPAGVPRKP---GMTRDD---LFNIN----AGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGT  178 (354)
Q Consensus       109 ~~aDvVIi~ag~~~~~---g~~r~d---~~~~n----~~~~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~~~~~~~~~  178 (354)
                      -..|++|..||.....   ..+..+   .+.-|    ....+..++.|++....+.||+++......            +
T Consensus        81 G~iDiLVnnAg~~~~~~~~~~~~~~~~~~~~vnl~g~~~~~~~~~~~m~~~~~gg~Ii~isS~~~~~------------~  148 (251)
T d1zk4a1          81 GPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFV------------G  148 (251)
T ss_dssp             SSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTS------------C
T ss_pred             CCceEEEeccccccccchhcccccchhhhccccccccchhHHHHHHHHHhcCCCCceEeeeccceec------------c
Confidence            6789999999865322   123322   33444    445666777777666667777776432211            2


Q ss_pred             CCCCCEEEeccchHHHHHHHHHHHhCCCCCCCcceEE
Q 018512          179 YDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVV  215 (354)
Q Consensus       179 ~p~~kviG~t~ld~~r~~~~la~~l~v~~~~v~~~v~  215 (354)
                      .|..-.++.+.-.-..|.+.+|..+...+..|++-.+
T Consensus       149 ~~~~~~Y~asKaal~~lt~~lA~e~~l~~~gIrVN~I  185 (251)
T d1zk4a1         149 DPSLGAYNASKGAVRIMSKSAALDCALKDYDVRVNTV  185 (251)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEE
T ss_pred             CCCchhHHHHHHHHhcchHHHHHHHhcCCCcEEEEEE
Confidence            2222223333322344666777654444555654444

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

Probab=97.40  E-value=0.00088  Score=58.70  Aligned_cols=155  Identities=19%  Similarity=0.240  Sum_probs=89.0

Q ss_pred             CeE-EEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCCCCeEEEEe-CCCcH----------Hhhh
Q 018512           43 FKV-AILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQL----------ENAL  108 (354)
Q Consensus        43 ~kI-~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~~~~v~~~~-~~~d~----------~~al  108 (354)
                      +|| .|+||++.+|..+|..|+..|.  .|++.|+++  ++....++.+...  .+..+. +-+|.          .+.+
T Consensus         1 KKValITGas~GIG~aia~~la~~Ga--~V~~~~r~~~~l~~~~~~i~~~g~--~~~~~~~Dv~~~~~v~~~~~~~~~~~   76 (255)
T d1gega_           1 KKVALVTGAGQGIGKAIALRLVKDGF--AVAIADYNDATAKAVASEINQAGG--HAVAVKVDVSDRDQVFAAVEQARKTL   76 (255)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHTTC--CEEEEECCTTSHHHHHHHHHHHHHHT
T ss_pred             CCEEEEcCCccHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHhcCC--cEEEEEeeCCCHHHHHHHHHHHHHHh
Confidence            376 6779999999999999999998  899999986  3334455554321  222221 11221          2335


Q ss_pred             CCCcEEEEcCCCCCCCC---CCH---HHHHHHHH----HHHHHHHHHHhhhCCCeEEEEecCCCCCchHHHHHHHHHhCC
Q 018512          109 TGMDLVIIPAGVPRKPG---MTR---DDLFNINA----GIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGT  178 (354)
Q Consensus       109 ~~aDvVIi~ag~~~~~g---~~r---~d~~~~n~----~~~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~~~~~~~~~  178 (354)
                      -..|++|..||......   .+.   ...+.-|+    ...+..++.+.+.+..+.|+++|......            +
T Consensus        77 g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~------------~  144 (255)
T d1gega_          77 GGFDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHV------------G  144 (255)
T ss_dssp             TCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTS------------C
T ss_pred             CCccEEEecccccccCcHHHhhhhhhhhhhhhcccchhhhhhhhcchhhhhccccccccccchhhcc------------c
Confidence            68999999998653221   222   23344454    44556667777777778777765322111            1


Q ss_pred             CCCCCEEEeccchHHHHHHHHHHHhCCCCCCCcceEE
Q 018512          179 YDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVV  215 (354)
Q Consensus       179 ~p~~kviG~t~ld~~r~~~~la~~l~v~~~~v~~~v~  215 (354)
                      .|..=.++.+.-.-..|.+.+|..++  +..|++-.+
T Consensus       145 ~~~~~~Y~asKaal~~ltk~lA~el~--~~gIrVN~I  179 (255)
T d1gega_         145 NPELAVYSSSKFAVRGLTQTAARDLA--PLGITVNGY  179 (255)
T ss_dssp             CTTBHHHHHHHHHHHHHHHHHHHHHG--GGTEEEEEE
T ss_pred             CcccccchhCHHHHHhhHHHHHHHhh--hhCcEEEEE
Confidence            22111122222233456777787764  445544333

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

Probab=97.39  E-value=0.00011  Score=65.13  Aligned_cols=77  Identities=16%  Similarity=0.066  Sum_probs=50.1

Q ss_pred             CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--ch-hHHHHHhcCCCCCeEEEEe----CCCcHHhhhCCCcE
Q 018512           41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TP-GVTADISHMDTGAVVRGFL----GQPQLENALTGMDL  113 (354)
Q Consensus        41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~-g~~~dl~~~~~~~~v~~~~----~~~d~~~al~~aDv  113 (354)
                      +++||.|+||+|++|++++..|+..|+  +|+.++++.  .. .....+.... ...++.+.    ....+.+++++++.
T Consensus         2 ~k~KILVtGatG~iG~~l~~~L~~~G~--~V~~~~R~~~~~~~~~~~~~~~~~-~~~v~~v~~d~~d~~~~~~~~~~~~~   78 (312)
T d1qyda_           2 KKSRVLIVGGTGYIGKRIVNASISLGH--PTYVLFRPEVVSNIDKVQMLLYFK-QLGAKLIEASLDDHQRLVDALKQVDV   78 (312)
T ss_dssp             CCCCEEEESTTSTTHHHHHHHHHHTTC--CEEEECCSCCSSCHHHHHHHHHHH-TTTCEEECCCSSCHHHHHHHHTTCSE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCC--EEEEEECCCcccchhHHHHHhhhc-cCCcEEEEeecccchhhhhhccCcch
Confidence            457899999999999999999999997  888888865  11 1111111111 11122211    11235678899999


Q ss_pred             EEEcCCC
Q 018512          114 VIIPAGV  120 (354)
Q Consensus       114 VIi~ag~  120 (354)
                      ++.+++.
T Consensus        79 ~~~~~~~   85 (312)
T d1qyda_          79 VISALAG   85 (312)
T ss_dssp             EEECCCC
T ss_pred             hhhhhhh
Confidence            9997654

>d1u8xx2 d.162.1.2 (X:170-445) Maltose-6'-phosphate glucosidase GlvA {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: AglA-like glucosidase
domain: Maltose-6'-phosphate glucosidase GlvA
species: Bacillus subtilis [TaxId: 1423]

Probab=97.38  E-value=0.00054  Score=61.09  Aligned_cols=74  Identities=12%  Similarity=0.087  Sum_probs=57.1

Q ss_pred             HHHHHHHHHHHhccCCCCcEEEeee-eeccC---CCccEEEEeEEEcCCCeEEeccCCCCCHHHHHHHHHHHHHHHHHHH
Q 018512          271 YAAVKFADACLRGLRGDAGVVECAF-VASQV---TELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSIQ  346 (354)
Q Consensus       271 ~a~~~ii~si~~~~~~~~~v~~~~~-~~g~~---~~~~~~svPv~ig~~Gv~~i~~~~~L~~~E~~~l~~sa~~i~~~~~  346 (354)
                      ..+++++++|.+|.+.   ++.+++ .+|.+   |+|+++++||+|+++|+.++.- ++|++...++++.-...-+-.++
T Consensus       153 e~av~ii~ai~~~~~~---~~~vNv~N~G~I~~Lp~d~vVEVp~~V~~~Gi~P~~~-g~lP~~~~~Li~~~k~~e~Ltve  228 (276)
T d1u8xx2         153 SYIVDLARAIAYNTGE---RMLLIVENNGAIANFDPTAMVEVPCIVGSNGPEPITV-GTIPQFQKGLMEQQVSVEKLTVE  228 (276)
T ss_dssp             HHHHHHHHHHHHTCCE---EEEEEEECTTSBTTSCTTSEEEEEEEEETTEEEECCC-BCCCHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhcCCCc---EEEEEeCCCCcCCCCChhhheeeEEEEcCCceEeeec-CCCcHHHHHHHHHHHHHHHHHHH
Confidence            6778999999999763   455554 46775   8899999999999999999866 69999998888765444444444


Q ss_pred             Hh
Q 018512          347 KG  348 (354)
Q Consensus       347 ~~  348 (354)
                      .+
T Consensus       229 Aa  230 (276)
T d1u8xx2         229 AW  230 (276)
T ss_dssp             HH
T ss_pred             HH
Confidence            44

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.35  E-value=0.00015  Score=63.57  Aligned_cols=153  Identities=16%  Similarity=0.198  Sum_probs=87.9

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc--hhHHHHHhcCCCCCeEEEEeCCCc------HHhhhCCCcE
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFLGQPQ------LENALTGMDL  113 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~--~g~~~dl~~~~~~~~v~~~~~~~d------~~~al~~aDv  113 (354)
                      .+++.|+||++.+|..++..|+..|.  +|++.|+++.  +....++....   .+..  +-+|      .-+.+...|+
T Consensus         7 GK~~lITGas~GIG~aia~~la~~G~--~V~~~~r~~~~l~~~~~~~~~~~---~~~~--Dv~d~~~v~~~~~~~g~iDi   79 (244)
T d1pr9a_           7 GRRVLVTGAGKGIGRGTVQALHATGA--RVVAVSRTQADLDSLVRECPGIE---PVCV--DLGDWEATERALGSVGPVDL   79 (244)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHSTTCE---EEEC--CTTCHHHHHHHHTTCCCCCE
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHcCC--EEEEEECCHHHHHHHHHhcCCCe---EEEE--eCCCHHHHHHHHHHhCCceE
Confidence            45899999999999999999999998  8999999762  22223332211   0110  1112      1234578899


Q ss_pred             EEEcCCCCCCCC---CCH---HHHHHHHH----HHHHHHHHHHhhhCCCeEEEEecCCCCCchHHHHHHHHHhCCCCCCC
Q 018512          114 VIIPAGVPRKPG---MTR---DDLFNINA----GIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKK  183 (354)
Q Consensus       114 VIi~ag~~~~~g---~~r---~d~~~~n~----~~~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~~~~~~~~~~p~~k  183 (354)
                      +|..||......   .+.   ...+..|+    ...+.+++.+.+....+.|++++.-....            +.|..-
T Consensus        80 lVnnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~------------~~~~~~  147 (244)
T d1pr9a_          80 LVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQR------------AVTNHS  147 (244)
T ss_dssp             EEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTS------------CCTTBH
T ss_pred             EEeccccccccchhhhhHHHHHHHHHHhhhhhhHHHHHhhhHHHHhCCcceEeecccccccc------------cccchh
Confidence            999998754221   222   22344444    35566666666555667777775322111            222222


Q ss_pred             EEEeccchHHHHHHHHHHHhCCCCCCCcceEE
Q 018512          184 LLGVTMLDVVRANTFVAEVLGLDPRDVDVPVV  215 (354)
Q Consensus       184 viG~t~ld~~r~~~~la~~l~v~~~~v~~~v~  215 (354)
                      .++.+.-.-..+.+.+|..++  +..|++-.+
T Consensus       148 ~Y~asKaal~~lt~~lA~el~--~~gIrvN~I  177 (244)
T d1pr9a_         148 VYCSTKGALDMLTKVMALELG--PHKIRVNAV  177 (244)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHG--GGTEEEEEE
T ss_pred             hhhhhHHHHHHHHHHHHHHhC--CCcEEEEEE
Confidence            233333234457788888775  455654444

>d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Neisseria meningitidis, serogroup B [TaxId: 487]

Probab=97.32  E-value=7.7e-05  Score=60.52  Aligned_cols=65  Identities=15%  Similarity=0.119  Sum_probs=44.4

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcC
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA  118 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~a  118 (354)
                      |||++||+ |++|++++..|+..+. .+|.++|+++..  ..++....   .++..   .+. ++++++|+||++.
T Consensus         1 MkI~fIG~-G~MG~ai~~~l~~~~~-~~i~v~~r~~~~--~~~l~~~~---~~~~~---~~~-~~v~~~Div~lav   65 (152)
T d1yqga2           1 MNVYFLGG-GNMAAAVAGGLVKQGG-YRIYIANRGAEK--RERLEKEL---GVETS---ATL-PELHSDDVLILAV   65 (152)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHCS-CEEEEECSSHHH--HHHHHHHT---CCEEE---SSC-CCCCTTSEEEECS
T ss_pred             CEEEEEcC-cHHHHHHHHHHHHCCC-CcEEEEeCChhH--HHHhhhhc---ccccc---ccc-ccccccceEEEec
Confidence            79999999 9999999998876662 299999997621  12222211   12222   232 4588999999984

>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn bsu222
species: Bacillus subtilis [TaxId: 1423]

Probab=97.30  E-value=0.00062  Score=53.34  Aligned_cols=70  Identities=14%  Similarity=0.178  Sum_probs=46.0

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEE-eCCCcHHhh-hCCCcEEEEcC
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGF-LGQPQLENA-LTGMDLVIIPA  118 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~-~~~~d~~~a-l~~aDvVIi~a  118 (354)
                      +|++|+|+ |.+|+.++..|...|+  +++++|.++.  .+.++.+... ..+.+- .....++++ +.+||.||++.
T Consensus         1 k~~iIiG~-G~~G~~la~~L~~~g~--~vvvid~d~~--~~~~~~~~~~-~~~~gd~~~~~~l~~a~i~~a~~vi~~~   72 (134)
T d2hmva1           1 KQFAVIGL-GRFGGSIVKELHRMGH--EVLAVDINEE--KVNAYASYAT-HAVIANATEENELLSLGIRNFEYVIVAI   72 (134)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTC--CCEEEESCHH--HHHHTTTTCS-EEEECCTTCTTHHHHHTGGGCSEEEECC
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCC--eEEEecCcHH--HHHHHHHhCC-cceeeecccchhhhccCCccccEEEEEc
Confidence            37899999 9999999999999998  8999999862  2233333321 111110 011223333 78999988874

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

Probab=97.29  E-value=0.0013  Score=59.54  Aligned_cols=105  Identities=14%  Similarity=0.129  Sum_probs=65.3

Q ss_pred             CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCC-Cc----HHhhhCCCcEEE
Q 018512           41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQ-PQ----LENALTGMDLVI  115 (354)
Q Consensus        41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~-~d----~~~al~~aDvVI  115 (354)
                      +.++|+|+||+|++|++++..|+..|+  +|+.+-++........+....   .+..+... .|    +..++.++|.++
T Consensus         2 ~kktIlVtGatG~iG~~lv~~Ll~~G~--~V~~l~R~~~~~~~~~~~~~~---~v~~~~gD~~d~~~~~~~a~~~~~~~~   76 (350)
T d1xgka_           2 QKKTIAVVGATGRQGASLIRVAAAVGH--HVRAQVHSLKGLIAEELQAIP---NVTLFQGPLLNNVPLMDTLFEGAHLAF   76 (350)
T ss_dssp             CCCCEEEESTTSHHHHHHHHHHHHTTC--CEEEEESCSCSHHHHHHHTST---TEEEEESCCTTCHHHHHHHHTTCSEEE
T ss_pred             CCCEEEEECCChHHHHHHHHHHHhCCC--eEEEEECCcchhhhhhhcccC---CCEEEEeeCCCcHHHHHHHhcCCceEE
Confidence            356899999999999999999999988  788887665222223333221   12222111 11    456889999998


Q ss_pred             EcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecC
Q 018512          116 IPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISN  160 (354)
Q Consensus       116 i~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tN  160 (354)
                      +......          ..+....+++++...+.+-..+++..|-
T Consensus        77 ~~~~~~~----------~~~~~~~~~~~~aa~~agv~~~v~~Ss~  111 (350)
T d1xgka_          77 INTTSQA----------GDEIAIGKDLADAAKRAGTIQHYIYSSM  111 (350)
T ss_dssp             ECCCSTT----------SCHHHHHHHHHHHHHHHSCCSEEEEEEC
T ss_pred             eeccccc----------chhhhhhhHHHHHHHHhCCCceEEEeec
Confidence            8643221          2234455667777777765555555553

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

Probab=97.25  E-value=0.00014  Score=63.71  Aligned_cols=76  Identities=20%  Similarity=0.180  Sum_probs=49.2

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc---h-hHHHHHhcCCCCCeEEEEeC----CCcHHhhhCCCcE
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT---P-GVTADISHMDTGAVVRGFLG----QPQLENALTGMDL  113 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~---~-g~~~dl~~~~~~~~v~~~~~----~~d~~~al~~aDv  113 (354)
                      ++||.|+||+|++|++++..|+..|+  +|+.++++..   . .....+.... ...+..+..    .....++++++|.
T Consensus         3 kkKILVtGatG~iG~~l~~~L~~~G~--~V~~l~R~~~~~~~~~~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~~~~~   79 (307)
T d1qyca_           3 RSRILLIGATGYIGRHVAKASLDLGH--PTFLLVRESTASSNSEKAQLLESFK-ASGANIVHGSIDDHASLVEAVKNVDV   79 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTC--CEEEECCCCCTTTTHHHHHHHHHHH-TTTCEEECCCTTCHHHHHHHHHTCSE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC--eEEEEECCCccccchhHHHHHHhhc-cCCcEEEEeecccchhhhhhhhhcee
Confidence            35899999999999999999999998  8999998761   1 1111111111 011121111    1234577899999


Q ss_pred             EEEcCCC
Q 018512          114 VIIPAGV  120 (354)
Q Consensus       114 VIi~ag~  120 (354)
                      |+..++.
T Consensus        80 vi~~~~~   86 (307)
T d1qyca_          80 VISTVGS   86 (307)
T ss_dssp             EEECCCG
T ss_pred             eeecccc
Confidence            9998653

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.23  E-value=0.00027  Score=61.74  Aligned_cols=154  Identities=17%  Similarity=0.217  Sum_probs=86.0

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCCCCeEEEEeCCCc---HH---hhhCCCcE
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLGQPQ---LE---NALTGMDL  113 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~~~~v~~~~~~~d---~~---~al~~aDv  113 (354)
                      .+++.|+||++.+|..++..|+..|.  .|++.|+++  +.....++....   .+.  .+-+|   .+   +.+...|+
T Consensus         5 GK~alITGas~GIG~aia~~la~~Ga--~V~~~~r~~~~l~~~~~~~~~~~---~~~--~Dv~~~~~v~~~~~~~g~iDi   77 (242)
T d1cyda_           5 GLRALVTGAGKGIGRDTVKALHASGA--KVVAVTRTNSDLVSLAKECPGIE---PVC--VDLGDWDATEKALGGIGPVDL   77 (242)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHSTTCE---EEE--CCTTCHHHHHHHHTTCCCCSE
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHhcCCCe---EEE--EeCCCHHHHHHHHHHcCCCeE
Confidence            45889999999999999999999998  999999875  222222322211   111  11122   12   23468899


Q ss_pred             EEEcCCCCCCCC---CCH---HHHHHHHH----HHHHHHHHHHhhhCCCeEEEEecCCCCCchHHHHHHHHHhCCCCCCC
Q 018512          114 VIIPAGVPRKPG---MTR---DDLFNINA----GIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKK  183 (354)
Q Consensus       114 VIi~ag~~~~~g---~~r---~d~~~~n~----~~~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~~~~~~~~~~p~~k  183 (354)
                      +|..||......   .+.   ...+.-|+    ...+...+.+.+....+.||+++......            +.|..-
T Consensus        78 lVnnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~------------~~~~~~  145 (242)
T d1cyda_          78 LVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHV------------TFPNLI  145 (242)
T ss_dssp             EEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTS------------CCTTBH
T ss_pred             EEECCccccchhHHHHHHHHHHHHHHHHhccchHHHHHhchhhhhhcccCcccccchhhccc------------cCCccc
Confidence            999998754221   222   22334444    34455566655555567777765422111            222211


Q ss_pred             EEEeccchHHHHHHHHHHHhCCCCCCCcceEEe
Q 018512          184 LLGVTMLDVVRANTFVAEVLGLDPRDVDVPVVG  216 (354)
Q Consensus       184 viG~t~ld~~r~~~~la~~l~v~~~~v~~~v~G  216 (354)
                      .++.+.-.-..|.+.+|..++  +..|++-.+-
T Consensus       146 ~Y~asKaal~~lt~~lA~e~~--~~gIrvN~I~  176 (242)
T d1cyda_         146 TYSSTKGAMTMLTKAMAMELG--PHKIRVNSVN  176 (242)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHG--GGTEEEEEEE
T ss_pred             cccchHHHHHHHHHHHHHHhC--ccCeecccCC
Confidence            233333233456777887764  4555544443

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

Probab=97.21  E-value=0.00065  Score=59.66  Aligned_cols=106  Identities=8%  Similarity=0.045  Sum_probs=67.0

Q ss_pred             EEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCc---HHhhhCCCcEEEEcCCCC
Q 018512           45 VAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQ---LENALTGMDLVIIPAGVP  121 (354)
Q Consensus        45 I~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d---~~~al~~aDvVIi~ag~~  121 (354)
                      |.|+||+|++|++++..|+++|. .+|+.+|..........+.+... ..........+   ....+.++++|++.|+..
T Consensus         2 ILITGgsGfIGs~lv~~L~~~g~-~~V~~~d~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~aa~~   79 (307)
T d1eq2a_           2 IIVTGGAGFIGSNIVKALNDKGI-TDILVVDNLKDGTKFVNLVDLNI-ADYMDKEDFLIQIMAGEEFGDVEAIFHEGACS   79 (307)
T ss_dssp             EEEETTTSHHHHHHHHHHHTTTC-CCEEEEECCSSGGGGHHHHTSCC-SEEEEHHHHHHHHHTTCCCSSCCEEEECCSCC
T ss_pred             EEEecCccHHHHHHHHHHHhCCC-CeEEEEECCCCcchhhcccccch-hhhccchHHHHHHhhhhcccchhhhhhhcccc
Confidence            78999999999999999999884 27888885431111112222211 11111000000   013457889999988766


Q ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHHhhhCCC
Q 018512          122 RKPGMTRDDLFNINAGIVRTLCEGIAKCCPN  152 (354)
Q Consensus       122 ~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~  152 (354)
                      .............|+.....+.+..++.+..
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~  110 (307)
T d1eq2a_          80 STTEWDGKYMMDNNYQYSKELLHYCLEREIP  110 (307)
T ss_dssp             CTTCCCHHHHHHHTHHHHHHHHHHHHHHTCC
T ss_pred             ccccccccccccccccccccccccccccccc
Confidence            5555566666777788888888888887654

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.20  E-value=0.00057  Score=61.50  Aligned_cols=172  Identities=13%  Similarity=0.027  Sum_probs=94.5

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc---hhHH----HHHhcCCCCCeEEEEe-CCCc---HHhhh--C
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT---PGVT----ADISHMDTGAVVRGFL-GQPQ---LENAL--T  109 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~---~g~~----~dl~~~~~~~~v~~~~-~~~d---~~~al--~  109 (354)
                      +|+.|+||+|++|++++..|+.+|+  +|+.+|+...   ....    .+..... ...++... +-.+   +..++  .
T Consensus         2 k~~LVTGatGfiG~~lv~~Ll~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Di~~~~~~~~~~~~~   78 (339)
T d1n7ha_           2 KIALITGITGQDGSYLTEFLLGKGY--EVHGLIRRSSNFNTQRINHIYIDPHNVN-KALMKLHYADLTDASSLRRWIDVI   78 (339)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC--EEEEEECCCSSCCCTTTTTTC---------CCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CEEEEeCCccHHHHHHHHHHHHCcC--EEEEEECCCcccchhhhhhhhhhhhhcc-ccceEEEEccccCHHHHHHHHhhh
Confidence            4899999999999999999999998  9999998531   0000    1111111 12233221 1122   22333  4


Q ss_pred             CCcEEEEcCCCCCCCC--CCHHHHHHHHHHHHHHHHHHHhhhC----CCeEEEEecCC-CCCchHHHHHHHHHhCCCCCC
Q 018512          110 GMDLVIIPAGVPRKPG--MTRDDLFNINAGIVRTLCEGIAKCC----PNATVNLISNP-VNSTVPIAAEVFKKAGTYDPK  182 (354)
Q Consensus       110 ~aDvVIi~ag~~~~~g--~~r~d~~~~n~~~~~~i~~~i~~~~----p~a~viv~tNP-v~~~~~~~~~~~~~~~~~p~~  182 (354)
                      +.|+||++|+......  ....+....|......+...+++.+    ...+++..+.. +.....   ....+..-+.|.
T Consensus        79 ~~D~Vih~Aa~~~~~~~~~~p~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~ss~~~~~~~~---~~~~E~~~~~p~  155 (339)
T d1n7ha_          79 KPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGSTP---PPQSETTPFHPR  155 (339)
T ss_dssp             CCSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTSC---SSBCTTSCCCCC
T ss_pred             ccchhhhccccccccccccCccccccccccccchhhhhhhhcccccccceeeeecccceecccCC---CCCCCCCCCCCc
Confidence            6799999987653211  1234556778777777777776543    22333333211 100000   000111123345


Q ss_pred             CEEEeccchHHHHHHHHHHHhCCCCCCCc-ceEEeecCC
Q 018512          183 KLLGVTMLDVVRANTFVAEVLGLDPRDVD-VPVVGGHAG  220 (354)
Q Consensus       183 kviG~t~ld~~r~~~~la~~l~v~~~~v~-~~v~G~hg~  220 (354)
                      ..+|.+.+...++-...++..+++...++ ..|+|.+..
T Consensus       156 ~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~  194 (339)
T d1n7ha_         156 SPYAASKCAAHWYTVNYREAYGLFACNGILFNHESPRRG  194 (339)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSC
T ss_pred             chhhHHHHHHHHHHHHHHHHhCCCEEEEEEccccCCCCC
Confidence            56777766666777777788887655554 567886543

>d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: L-alanine dehydrogenase
species: Phormidium lapideum [TaxId: 32060]

Probab=97.12  E-value=0.00066  Score=55.86  Aligned_cols=80  Identities=21%  Similarity=0.250  Sum_probs=55.2

Q ss_pred             CCCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC-chhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEc
Q 018512           39 GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN-TPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIP  117 (354)
Q Consensus        39 ~~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~-~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~  117 (354)
                      +.++-||+|||| |.+|.+-+...+.-|-  +|..+|.+. ......+....  ..... ......+++++++||+||-+
T Consensus        29 gv~pa~V~ViGa-GvaG~~A~~~A~~lGA--~V~~~D~~~~~l~~l~~~~~~--~~~~~-~~~~~~l~~~~~~aDivI~a  102 (168)
T d1pjca1          29 GVKPGKVVILGG-GVVGTEAAKMAVGLGA--QVQIFDINVERLSYLETLFGS--RVELL-YSNSAEIETAVAEADLLIGA  102 (168)
T ss_dssp             TBCCCEEEEECC-SHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHGG--GSEEE-ECCHHHHHHHHHTCSEEEEC
T ss_pred             CCCCcEEEEECC-ChHHHHHHHHHhhCCC--EEEEEeCcHHHHHHHHHhhcc--cceee-hhhhhhHHHhhccCcEEEEe
Confidence            566789999999 9999998888886665  999999986 22222222111  12222 22234578899999999999


Q ss_pred             CCCCCCC
Q 018512          118 AGVPRKP  124 (354)
Q Consensus       118 ag~~~~~  124 (354)
                      +-.|.+.
T Consensus       103 alipG~~  109 (168)
T d1pjca1         103 VLVPGRR  109 (168)
T ss_dssp             CCCTTSS
T ss_pred             eecCCcc
Confidence            8877543

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

Probab=97.09  E-value=0.0044  Score=54.35  Aligned_cols=156  Identities=14%  Similarity=0.121  Sum_probs=90.5

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC---chhHHHHHhcCCCCCeEEEEe-CCCc---H-------Hhhh
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN---TPGVTADISHMDTGAVVRGFL-GQPQ---L-------ENAL  108 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~---~~g~~~dl~~~~~~~~v~~~~-~~~d---~-------~~al  108 (354)
                      +.+.|+||++.+|..++..|+..|.  .|++.|++.   ++....++....  ..+..+. +-++   .       .+.+
T Consensus         8 K~alITGas~GIG~aia~~la~~G~--~Vv~~~r~~~~~~~~~~~~~~~~g--~~~~~~~~Dvt~~~~v~~~~~~~~~~~   83 (261)
T d1geea_           8 KVVVITGSSTGLGKSMAIRFATEKA--KVVVNYRSKEDEANSVLEEIKKVG--GEAIAVKGDVTVESDVINLVQSAIKEF   83 (261)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTC--EEEEEESSCHHHHHHHHHHHHHTT--CEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEeCCcHHHHHHHHHHHHhcC--CcEEEEEccCCCHHHHHHHHHHHHHHh
Confidence            4788889999999999999999998  899999875   233344444432  2222221 1122   1       1234


Q ss_pred             CCCcEEEEcCCCCCCCC---CCHH---HHHHHH----HHHHHHHHHHHhhhCCCeEEEEecCCCCCchHHHHHHHHHhCC
Q 018512          109 TGMDLVIIPAGVPRKPG---MTRD---DLFNIN----AGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGT  178 (354)
Q Consensus       109 ~~aDvVIi~ag~~~~~g---~~r~---d~~~~n----~~~~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~~~~~~~~~  178 (354)
                      ..-|++|..||......   .+..   ..+..|    ....+..++.|.+....+.|+++|......            +
T Consensus        84 G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~~Iv~isS~~~~~------------~  151 (261)
T d1geea_          84 GKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKI------------P  151 (261)
T ss_dssp             SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTS------------C
T ss_pred             CCCCEeeccceecCCcchhhcCHHHHHHHHHHhcccchhHHHHHhhhhccccccccccccccchhcc------------c
Confidence            57899999998753221   2322   234445    455667777787766666666665332211            2


Q ss_pred             CCCCCEEEeccchHHHHHHHHHHHhCCCCCCCcceEEe
Q 018512          179 YDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVVG  216 (354)
Q Consensus       179 ~p~~kviG~t~ld~~r~~~~la~~l~v~~~~v~~~v~G  216 (354)
                      .|..-.++.+.-.-..|.+.+|..++  +..|++-.+-
T Consensus       152 ~~~~~~Y~asKaal~~lt~~lA~e~~--~~gIrVN~I~  187 (261)
T d1geea_         152 WPLFVHYAASKGGMKLMTETLALEYA--PKGIRVNNIG  187 (261)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHHG--GGTCEEEEEE
T ss_pred             CccccccccCCccchhhHHHHHHHhh--hhCcEEEEEe
Confidence            22221233333334557778887774  4556554443

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=97.06  E-value=0.0047  Score=53.79  Aligned_cols=114  Identities=15%  Similarity=0.201  Sum_probs=67.7

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCCCCeEEEEe-CCCc---H-------Hhhh
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQ---L-------ENAL  108 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~~~~v~~~~-~~~d---~-------~~al  108 (354)
                      .+.+.|+||++.+|..+|..|+..|.  .|++.|++.  ....+.++.+.. ...+..+. +-++   .       .+.+
T Consensus         5 gK~~lITGas~GIG~aia~~la~~Ga--~V~i~~r~~~~~~~~~~~l~~~~-g~~~~~~~~Dv~~~~~v~~~~~~~~~~~   81 (251)
T d1vl8a_           5 GRVALVTGGSRGLGFGIAQGLAEAGC--SVVVASRNLEEASEAAQKLTEKY-GVETMAFRCDVSNYEEVKKLLEAVKEKF   81 (251)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHHH-CCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHHHh-CCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            45789999999999999999999998  899999986  222333443221 11222211 1112   1       2334


Q ss_pred             CCCcEEEEcCCCCCCCC---CCHH---HHHHHHH----HHHHHHHHHHhhhCCCeEEEEec
Q 018512          109 TGMDLVIIPAGVPRKPG---MTRD---DLFNINA----GIVRTLCEGIAKCCPNATVNLIS  159 (354)
Q Consensus       109 ~~aDvVIi~ag~~~~~g---~~r~---d~~~~n~----~~~~~i~~~i~~~~p~a~viv~t  159 (354)
                      ...|++|..||......   .+..   ..+..|+    ...+..++.|++.. .+.||+++
T Consensus        82 g~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~G~Ii~i~  141 (251)
T d1vl8a_          82 GKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESD-NPSIINIG  141 (251)
T ss_dssp             SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCS-SCEEEEEC
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccc-cccccccc
Confidence            68999999998753321   2222   2344454    45556666665443 44455553

>d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Haemophilus influenzae [TaxId: 727]

Probab=97.06  E-value=0.0012  Score=52.83  Aligned_cols=53  Identities=23%  Similarity=0.360  Sum_probs=42.3

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcC
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA  118 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~a  118 (354)
                      .+||+|||+.|.+|..++..|...|+  +|.++|++...                      ..+....++|+++.+.
T Consensus         9 ~~kI~iIGg~G~mG~~la~~L~~~G~--~V~~~d~~~~~----------------------~~~~~~~~~~~v~~~~   61 (152)
T d2pv7a2           9 IHKIVIVGGYGKLGGLFARYLRASGY--PISILDREDWA----------------------VAESILANADVVIVSV   61 (152)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHTTTC--CEEEECTTCGG----------------------GHHHHHTTCSEEEECS
T ss_pred             CCeEEEEcCCCHHHHHHHHHHHHcCC--CcEeccccccc----------------------ccchhhhhcccccccc
Confidence            45999999449999999999999999  99999986521                      1135567889888874

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

Probab=97.05  E-value=0.0029  Score=55.34  Aligned_cols=151  Identities=16%  Similarity=0.169  Sum_probs=86.7

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCCCCeEEEE-eCCCc---H-------Hhhh
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGF-LGQPQ---L-------ENAL  108 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~~~~v~~~-~~~~d---~-------~~al  108 (354)
                      .+++.|+||++.+|..+|..|+..|.  +|++.|++.  ++....++...     ...+ .+-++   .       .+.+
T Consensus         5 gK~alVTGas~GIG~aia~~la~~Ga--~V~~~~r~~~~l~~~~~~~~~~-----~~~~~~Dvt~~~~v~~~~~~~~~~~   77 (256)
T d1k2wa_           5 GKTALITGSARGIGRAFAEAYVREGA--RVAIADINLEAARATAAEIGPA-----ACAIALDVTDQASIDRCVAELLDRW   77 (256)
T ss_dssp             TEEEEEETCSSHHHHHHHHHHHHTTE--EEEEEESCHHHHHHHHHHHCTT-----EEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHhCCc-----eEEEEeeCCCHHHHHHHHHHHHHHh
Confidence            34788999999999999999999998  899999976  33333444211     1111 11112   1       2234


Q ss_pred             CCCcEEEEcCCCCCCCC---CC---HHHHHHHHH----HHHHHHHHHHhhhCCCeEEEEecCCCCCchHHHHHHHHHhCC
Q 018512          109 TGMDLVIIPAGVPRKPG---MT---RDDLFNINA----GIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGT  178 (354)
Q Consensus       109 ~~aDvVIi~ag~~~~~g---~~---r~d~~~~n~----~~~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~~~~~~~~~  178 (354)
                      -..|++|..||......   .+   ....+..|+    ...+..++.+.+....+.|+++|......            +
T Consensus        78 g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~------------~  145 (256)
T d1k2wa_          78 GSIDILVNNAALFDLAPIVEITRESYDRLFAINVSGTLFMMQAVARAMIAGGRGGKIINMASQAGRR------------G  145 (256)
T ss_dssp             SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTS------------C
T ss_pred             CCccEEEeecccccccccccCCHHHHHhhhceeeeccccchhhccchhHHhccCCccccccchhhcc------------c
Confidence            57899999998653221   22   223345554    44556666666666667777776322111            1


Q ss_pred             CCCCCEEEeccchHHHHHHHHHHHhCCCCCCCcce
Q 018512          179 YDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVP  213 (354)
Q Consensus       179 ~p~~kviG~t~ld~~r~~~~la~~l~v~~~~v~~~  213 (354)
                      .|..=.++.+.-.-..|.+.+|..++  +..|++-
T Consensus       146 ~~~~~~Y~asKaal~~lt~~lA~el~--~~gIrVN  178 (256)
T d1k2wa_         146 EALVGVYCATKAAVISLTQSAGLNLI--RHGINVN  178 (256)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHHG--GGTEEEE
T ss_pred             cccccchhhhhhHHHHHHHHHHHHhc--ccCeEEE
Confidence            22211222232233456777887775  4445433

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=97.01  E-value=0.00035  Score=57.23  Aligned_cols=34  Identities=24%  Similarity=0.367  Sum_probs=31.7

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   78 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~   78 (354)
                      |||+||||+|.+|+++|..|+..|+  +|++.++++
T Consensus         1 Mki~vigGaG~iG~alA~~la~~G~--~V~l~~R~~   34 (212)
T d1jaya_           1 MRVALLGGTGNLGKGLALRLATLGH--EIVVGSRRE   34 (212)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTTTC--EEEEEESSH
T ss_pred             CEEEEEeCCcHHHHHHHHHHHHCCC--EEEEEECCH
Confidence            8999996669999999999999999  999999986

>d1obba2 d.162.1.2 (A:173-480) Alpha-glucosidase AglA {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: AglA-like glucosidase
domain: Alpha-glucosidase AglA
species: Thermotoga maritima [TaxId: 2336]

Probab=96.91  E-value=0.0021  Score=58.04  Aligned_cols=62  Identities=13%  Similarity=0.061  Sum_probs=47.8

Q ss_pred             HHHHHHHHHhccCCCCcEEEeee-eeccC---CCccEEEEeEEEcCCCeEEeccCCCCCHHHHH-HHHHH
Q 018512          273 AVKFADACLRGLRGDAGVVECAF-VASQV---TELPFFASKVRLGRQGAEEIFQLGPLNEYERI-GLEKA  337 (354)
Q Consensus       273 ~~~ii~si~~~~~~~~~v~~~~~-~~g~~---~~~~~~svPv~ig~~Gv~~i~~~~~L~~~E~~-~l~~s  337 (354)
                      ++++++||.+|++.   ++.+++ .+|.+   |+|.+++|||+|+++|+.++.-.++|++.-.+ +++.-
T Consensus       184 a~~ii~ai~~~~~~---~~~vNv~N~G~I~nLp~davVEVpc~v~~~Gi~P~~v~~~lP~~~~~gl~~~~  250 (308)
T d1obba2         184 HIPFIDALLNDNKA---RFVVNIPNKGIIHGIDDDVVVEVPALVDKNGIHPEKIEPPLPDRVVKYYLRPR  250 (308)
T ss_dssp             HHHHHHHHHHCCCE---EEEEEEECTTSSTTSCTTSEEEEEEEEETTEEEECCCSSCCCHHHHHHTHHHH
T ss_pred             HHHHHHHHHcCCCe---EEEEECCCCCcCCCCCccceEEEEEEEeCCceeeeecCCCCChHHHHHHHHHH
Confidence            78999999999763   555555 46776   88999999999999999998532588986544 55443

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

Probab=96.90  E-value=0.01  Score=51.69  Aligned_cols=158  Identities=16%  Similarity=0.112  Sum_probs=86.9

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCCCCeEEEEe-CCCcH----------Hhhh
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQL----------ENAL  108 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~~~~v~~~~-~~~d~----------~~al  108 (354)
                      .+.+.|+||++.+|..++..|+..|.  .|++.|+++  ++....++........+..+. +-+|.          .+.+
T Consensus         4 gK~alITGas~GIG~aia~~la~~Ga--~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~   81 (258)
T d1iy8a_           4 DRVVLITGGGSGLGRATAVRLAAEGA--KLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERF   81 (258)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHhhCCCCeEEEEeccCCCHHHHHHHHHHHHHHh
Confidence            34788899999999999999999998  999999986  222233333221122222221 11221          2334


Q ss_pred             CCCcEEEEcCCCCCCCC----CCHH---HHHHHHH----HHHHHHHHHHhhhCCCeEEEEecCCCCCchHHHHHHHHHhC
Q 018512          109 TGMDLVIIPAGVPRKPG----MTRD---DLFNINA----GIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAG  177 (354)
Q Consensus       109 ~~aDvVIi~ag~~~~~g----~~r~---d~~~~n~----~~~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~~~~~~~~  177 (354)
                      -..|++|..||.....+    .+..   ..+.-|+    ...+...+.+++.. .+.||+++......            
T Consensus        82 G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~-~G~Ii~isS~~~~~------------  148 (258)
T d1iy8a_          82 GRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQG-SGMVVNTASVGGIR------------  148 (258)
T ss_dssp             SCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCGGGTS------------
T ss_pred             CCCCEEEECCcccccCCchhhhhhhHHHHHhhhhccchhhhhhhhHhhhhhhc-CCCCcccccHhhcc------------
Confidence            68999999998643222    2322   2344454    44455555665544 55566665322111            


Q ss_pred             CCCCCCEEEeccchHHHHHHHHHHHhCCCCCCCcceEEe
Q 018512          178 TYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVVG  216 (354)
Q Consensus       178 ~~p~~kviG~t~ld~~r~~~~la~~l~v~~~~v~~~v~G  216 (354)
                      +.|..=.++.+.-.-..|.+.+|..++  +..|++-.+-
T Consensus       149 ~~~~~~~Y~asKaal~~lt~~lA~el~--~~gIrVN~i~  185 (258)
T d1iy8a_         149 GIGNQSGYAAAKHGVVGLTRNSAVEYG--RYGIRINAIA  185 (258)
T ss_dssp             BCSSBHHHHHHHHHHHHHHHHHHHHHG--GGTCEEEEEE
T ss_pred             CCCCchHHHHHHHHHHHHHHHHHHHhC--ccCceEEEEe
Confidence            222222222333233456777888774  5556554443

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

Probab=96.90  E-value=0.0049  Score=53.80  Aligned_cols=155  Identities=14%  Similarity=0.099  Sum_probs=86.2

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC---chhHHHHHhcCCCCCeEEEEe-CCCc---H-------Hhhh
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN---TPGVTADISHMDTGAVVRGFL-GQPQ---L-------ENAL  108 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~---~~g~~~dl~~~~~~~~v~~~~-~~~d---~-------~~al  108 (354)
                      +.+.|+||++.+|..+|..|+..|.  .|++.|+++   .+....++.... ...+..+. +-+|   .       .+.+
T Consensus         5 K~alITGas~GIG~aiA~~la~~Ga--~V~~~~r~~~~~~~~~~~~~~~~~-g~~~~~~~~Dv~~~~~v~~~~~~~~~~~   81 (260)
T d1x1ta1           5 KVAVVTGSTSGIGLGIATALAAQGA--DIVLNGFGDAAEIEKVRAGLAAQH-GVKVLYDGADLSKGEAVRGLVDNAVRQM   81 (260)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTC--EEEEECCSCHHHHHHHHHHHHHHH-TSCEEEECCCTTSHHHHHHHHHHHHHHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCC--EEEEEeCCcHHHHHHHHHHHHHhc-CCcEEEEECCCCCHHHHHHHHHHHHHHh
Confidence            4678889999999999999999998  899999975   222222332211 11122111 1111   1       2334


Q ss_pred             CCCcEEEEcCCCCCCCC---CCH---HHHHHHH----HHHHHHHHHHHhhhCCCeEEEEecCCCCCchHHHHHHHHHhCC
Q 018512          109 TGMDLVIIPAGVPRKPG---MTR---DDLFNIN----AGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGT  178 (354)
Q Consensus       109 ~~aDvVIi~ag~~~~~g---~~r---~d~~~~n----~~~~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~~~~~~~~~  178 (354)
                      -.-|++|..||......   .+.   ...+.-|    ....+..++.+++.. .+.||+++......            +
T Consensus        82 G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~-~G~Iv~isS~~~~~------------~  148 (260)
T d1x1ta1          82 GRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQG-FGRIINIASAHGLV------------A  148 (260)
T ss_dssp             SCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTS------------C
T ss_pred             CCCcEEEeecccccCCchhhhhHHhhhhhhhccccccccccchhhhhHhhcC-CceEeeccccccee------------c
Confidence            67999999998754321   222   2334444    455566677777654 56667665432211            1


Q ss_pred             CCCCCEEEeccchHHHHHHHHHHHhCCCCCCCcceEE
Q 018512          179 YDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVV  215 (354)
Q Consensus       179 ~p~~kviG~t~ld~~r~~~~la~~l~v~~~~v~~~v~  215 (354)
                      .|..=.++.+.-.-..|.+.+|..++  +..|++-.+
T Consensus       149 ~~~~~~Y~asKaal~~lt~~lA~el~--~~gIrVN~I  183 (260)
T d1x1ta1         149 SANKSAYVAAKHGVVGFTKVTALETA--GQGITANAI  183 (260)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHHT--TTTEEEEEE
T ss_pred             cCCcchhhhhhhhHHHhHHHHHHHhc--hhCcEEEEE
Confidence            22211222333234457788888875  555654444

>d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Nicotinamide nucleotide transhydrogenase dI component
species: Rhodospirillum rubrum [TaxId: 1085]

Probab=96.88  E-value=0.00098  Score=55.53  Aligned_cols=94  Identities=19%  Similarity=0.154  Sum_probs=58.0

Q ss_pred             hhhhhhhhcccCCCCCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC-chhHHHHHhcCCCC------CeEE--
Q 018512           26 NSCLRQAKCRAKGGAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN-TPGVTADISHMDTG------AVVR--   96 (354)
Q Consensus        26 ~~~~~~~~~~~~~~~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~-~~g~~~dl~~~~~~------~~v~--   96 (354)
                      +++|++.-+.. ++.++-||+|||| |.+|.+-+...+.-|-  .|..+|++. ......++......      ....  
T Consensus        14 ~k~~~~l~~~~-g~V~pa~VvViGa-GvaG~~Aa~~A~~lGA--~V~v~D~~~~~~~~l~~l~~~~i~~~~~~~~~~~~~   89 (183)
T d1l7da1          14 ARAFPMMMTAA-GTVPPARVLVFGV-GVAGLQAIATAKRLGA--VVMATDVRAATKEQVESLGGKFITVDDEAMKTAETA   89 (183)
T ss_dssp             SSCSSCEEETT-EEECCCEEEEECC-SHHHHHHHHHHHHTTC--EEEEECSCSTTHHHHHHTTCEECCC-----------
T ss_pred             hhhcCCccccc-CCcCCcEEEEEcC-cHHHHHHHHHHHHcCC--EEEEEeccHHHHHHHHHhhcceEEEecccccccccc
Confidence            34555544443 6777889999999 9999998887776565  999999987 33333333210000      0000  


Q ss_pred             --------E-Ee--CCCcHHhhhCCCcEEEEcCCCCCC
Q 018512           97 --------G-FL--GQPQLENALTGMDLVIIPAGVPRK  123 (354)
Q Consensus        97 --------~-~~--~~~d~~~al~~aDvVIi~ag~~~~  123 (354)
                              . +.  ....+.+.+++||+||-++-.|.+
T Consensus        90 ~gyA~~~s~~~~~~~~~~l~~~l~~aDlVI~talipG~  127 (183)
T d1l7da1          90 GGYAKEMGEEFRKKQAEAVLKELVKTDIAITTALIPGK  127 (183)
T ss_dssp             ------------CCHHHHHHHHHTTCSEEEECCCCTTS
T ss_pred             ccchhhcCHHHHHHHHHHHHHHHHhhhhheeeeecCCc
Confidence                    0 00  001244668999999999877754

>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Saccharopine reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=96.88  E-value=0.00047  Score=56.10  Aligned_cols=70  Identities=17%  Similarity=0.135  Sum_probs=47.3

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCC---CcHHhhhCCCcEEEEcC
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQ---PQLENALTGMDLVIIPA  118 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~---~d~~~al~~aDvVIi~a  118 (354)
                      +||+|+|| |.+|+.+|..|...|+  +|+++|++..  .+.++........... ...   ....+.+...|+++.+.
T Consensus         3 K~IliiGa-G~~G~~~a~~L~~~g~--~V~v~dr~~~--~a~~l~~~~~~~~~~~-~~~~~~~~~~~~i~~~~~~i~~~   75 (182)
T d1e5qa1           3 KSVLMLGS-GFVTRPTLDVLTDSGI--KVTVACRTLE--SAKKLSAGVQHSTPIS-LDVNDDAALDAEVAKHDLVISLI   75 (182)
T ss_dssp             CEEEEECC-STTHHHHHHHHHTTTC--EEEEEESCHH--HHHHHHTTCTTEEEEE-CCTTCHHHHHHHHTTSSEEEECS
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCC--EEEEEECChH--HHHHHHhccccccccc-ccccchhhhHhhhhccceeEeec
Confidence            49999999 9999999999999998  9999999763  2233443221111111 111   23356678999988763

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

Probab=96.87  E-value=0.0037  Score=54.90  Aligned_cols=156  Identities=17%  Similarity=0.180  Sum_probs=86.2

Q ss_pred             CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCCCCeEEEEe-CCCc---H-------Hhh
Q 018512           41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQ---L-------ENA  107 (354)
Q Consensus        41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~~~~v~~~~-~~~d---~-------~~a  107 (354)
                      +.+.+.|+||++-+|..+|..|+..|.  +|++.|+++  ++..+.++....   .+..+. +-+|   .       .+.
T Consensus         5 ~gKvalITGas~GIG~aia~~la~~Ga--~V~i~~r~~~~~~~~~~~l~~~~---~~~~~~~Dv~~~~~v~~~~~~~~~~   79 (268)
T d2bgka1           5 QDKVAIITGGAGGIGETTAKLFVRYGA--KVVIADIADDHGQKVCNNIGSPD---VISFVHCDVTKDEDVRNLVDTTIAK   79 (268)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHCCTT---TEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHhcCCC---ceEEEEccCCCHHHHHHHHHHHHHH
Confidence            345788999999999999999999998  899999976  333344554322   122211 1112   1       233


Q ss_pred             hCCCcEEEEcCCCCCCC-----CCCHH---HHHHHH----HHHHHHHHHHHhhhCCCeEEEEecCCCCCchHHHHHHHHH
Q 018512          108 LTGMDLVIIPAGVPRKP-----GMTRD---DLFNIN----AGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKK  175 (354)
Q Consensus       108 l~~aDvVIi~ag~~~~~-----g~~r~---d~~~~n----~~~~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~~~~~~  175 (354)
                      +...|++|..||.....     ..+..   ..+..|    ....+..++.|.+.. .+.+++++.-....          
T Consensus        80 ~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~-~g~ii~iss~~~~~----------  148 (268)
T d2bgka1          80 HGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAK-KGSIVFTASISSFT----------  148 (268)
T ss_dssp             HSCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGT-CEEEEEECCGGGTC----------
T ss_pred             cCCcceeccccccccCCCcccccCcHHHHHHHHHHhhcchhhhhhhhcchHhhcC-CCCccccccccccc----------
Confidence            45789999999864321     12222   233444    445556666666544 45555554322111          


Q ss_pred             hCCCCCCCEEEeccchHHHHHHHHHHHhCCCCCCCcceEE
Q 018512          176 AGTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVV  215 (354)
Q Consensus       176 ~~~~p~~kviG~t~ld~~r~~~~la~~l~v~~~~v~~~v~  215 (354)
                       .+.+..-.++.+.-.-..|.+.+|..++  +..|++-.+
T Consensus       149 -~~~~~~~~Y~asKaal~~lt~~lA~el~--~~gIrVN~I  185 (268)
T d2bgka1         149 -AGEGVSHVYTATKHAVLGLTTSLCTELG--EYGIRVNCV  185 (268)
T ss_dssp             -CCTTSCHHHHHHHHHHHHHHHHHHHHHG--GGTEEEEEE
T ss_pred             -cccccccccchhHHHHHhCHHHHHHHhC--hhCeEEEec
Confidence             0111111233333334557777887775  445544444

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.86  E-value=0.0074  Score=52.31  Aligned_cols=153  Identities=17%  Similarity=0.200  Sum_probs=86.1

Q ss_pred             CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCCCCeEEEE-eCCCc----------HHhh
Q 018512           41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGF-LGQPQ----------LENA  107 (354)
Q Consensus        41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~~~~v~~~-~~~~d----------~~~a  107 (354)
                      +.+.+.|+||++.+|..+|..|+..|.  +|++.|+++  .+....++...     ...+ .+-+|          ..+.
T Consensus         5 ~gK~alITGas~GIG~aia~~la~~G~--~V~~~~r~~~~~~~~~~~~~~~-----~~~~~~Dv~~~~~v~~~~~~~~~~   77 (244)
T d1nffa_           5 TGKVALVSGGARGMGASHVRAMVAEGA--KVVFGDILDEEGKAMAAELADA-----ARYVHLDVTQPAQWKAAVDTAVTA   77 (244)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHTGGG-----EEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHhhCc-----ceEEEeecCCHHHHHHHHHHHHHH
Confidence            445788899999999999999999998  899999986  23333444321     1111 11112          1233


Q ss_pred             hCCCcEEEEcCCCCCCC---CCCH---HHHHHHHH----HHHHHHHHHHhhhCCCeEEEEecCCCCCchHHHHHHHHHhC
Q 018512          108 LTGMDLVIIPAGVPRKP---GMTR---DDLFNINA----GIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAG  177 (354)
Q Consensus       108 l~~aDvVIi~ag~~~~~---g~~r---~d~~~~n~----~~~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~~~~~~~~  177 (354)
                      +...|++|..||.....   ..+.   .+.+.-|+    ...+...+.+.+. ..+.||+++......            
T Consensus        78 ~g~idilinnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~-~~G~Ii~isS~~~~~------------  144 (244)
T d1nffa_          78 FGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEA-GRGSIINISSIEGLA------------  144 (244)
T ss_dssp             HSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCGGGTS------------
T ss_pred             hCCCeEEEECCcccCCCchhhCCHHHHhHHhhcccchhhHHHHHHHhHHHhc-CcceEEecccccccc------------
Confidence            56799999999865322   2222   23344454    3444555566554 457777776433221            


Q ss_pred             CCCCCCEEEeccchHHHHHHHHHHHhCCCCCCCcceEE
Q 018512          178 TYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVV  215 (354)
Q Consensus       178 ~~p~~kviG~t~ld~~r~~~~la~~l~v~~~~v~~~v~  215 (354)
                      +.|..-.++.+.-.-..|.+.+|..++  +..|++-.+
T Consensus       145 ~~~~~~~Y~asKaal~~ltk~lA~el~--~~gIrVN~I  180 (244)
T d1nffa_         145 GTVACHGYTATKFAVRGLTKSTALELG--PSGIRVNSI  180 (244)
T ss_dssp             CCTTBHHHHHHHHHHHHHHHHHHHHHG--GGTEEEEEE
T ss_pred             ccccccchhhHHHHHHHHHHHHHHHhc--ccCEEEEEE
Confidence            122211233333234456777777764  444544333

>d1vjta2 d.162.1.2 (A:192-469) Putative alpha-glucosidase TM0752 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: AglA-like glucosidase
domain: Putative alpha-glucosidase TM0752
species: Thermotoga maritima [TaxId: 2336]

Probab=96.85  E-value=0.0022  Score=57.02  Aligned_cols=55  Identities=11%  Similarity=-0.026  Sum_probs=42.2

Q ss_pred             HHHHHHHHHHHhccCCCCcEEEeee-eeccC---CCccEEEEeEEEcCCCeEEeccCCCCCH
Q 018512          271 YAAVKFADACLRGLRGDAGVVECAF-VASQV---TELPFFASKVRLGRQGAEEIFQLGPLNE  328 (354)
Q Consensus       271 ~a~~~ii~si~~~~~~~~~v~~~~~-~~g~~---~~~~~~svPv~ig~~Gv~~i~~~~~L~~  328 (354)
                      ..++++++||.+|++.   ++.+++ .+|.+   |+|.++++||+|+++|+.++.-.+.++.
T Consensus       153 e~a~~ii~ai~~~~~~---~~~vNv~N~G~I~nLp~davVEVpc~Vd~~Gi~P~~vg~~~p~  211 (278)
T d1vjta2         153 EQHIPFINAIANNKRV---RLFLNVENQGTLKDFPDDVVMELPVWVDCCGIHREKVEPDLTH  211 (278)
T ss_dssp             CSHHHHHHHHHHCCCE---EEEEEEECTTSSTTSCSSSEEEEEEEEETTEEEECCCCSCCCH
T ss_pred             HHHHHHHHHHhCCCCe---EEEEECCCCCcCCCCCchhheEeEEEEeCCceeeeecCCCChH
Confidence            4567999999999863   555554 46776   8899999999999999999755323443

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.83  E-value=0.0085  Score=52.05  Aligned_cols=115  Identities=17%  Similarity=0.116  Sum_probs=72.5

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCCCCeEEEEe-CCCcH----------Hhhh
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQL----------ENAL  108 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~~~~v~~~~-~~~d~----------~~al  108 (354)
                      .+.+.|+||++-+|.++|..|+..|.  .|++.|++.  ......++........+..+. +-++.          .+.+
T Consensus         3 GKvalITGas~GIG~aia~~la~~Ga--~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   80 (254)
T d2gdza1           3 GKVALVTGAAQGIGRAFAEALLLKGA--KVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHF   80 (254)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHHhcCCCcEEEEEeecCCHHHHHHHHHHHHHHc
Confidence            45788889999999999999999998  899999986  233334454332122233221 11222          1334


Q ss_pred             CCCcEEEEcCCCCCCCCCCHHHHHHHHH----HHHHHHHHHHhhhC--CCeEEEEecC
Q 018512          109 TGMDLVIIPAGVPRKPGMTRDDLFNINA----GIVRTLCEGIAKCC--PNATVNLISN  160 (354)
Q Consensus       109 ~~aDvVIi~ag~~~~~g~~r~d~~~~n~----~~~~~i~~~i~~~~--p~a~viv~tN  160 (354)
                      -..|++|..||....  .+..+.+..|+    ...+..++.+.+..  ..+.|+++|.
T Consensus        81 G~iDilVnnAg~~~~--~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~~~g~Iv~isS  136 (254)
T d2gdza1          81 GRLDILVNNAGVNNE--KNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSS  136 (254)
T ss_dssp             SCCCEEEECCCCCCS--SSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECC
T ss_pred             CCcCeeccccccccc--ccchheeeeehhhHHHHHHHHHHHHHHhhcCCCcEEEeecc
Confidence            579999999987643  23444444454    45666677776543  3477777764

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=96.81  E-value=0.0012  Score=57.04  Aligned_cols=109  Identities=17%  Similarity=0.176  Sum_probs=67.4

Q ss_pred             CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCC---cHHhhhCCCcEEEEc
Q 018512           41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQP---QLENALTGMDLVIIP  117 (354)
Q Consensus        41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~---d~~~al~~aDvVIi~  117 (354)
                      +.+++.|+||++.+|..++..|+..|.  +|++.|+++.  .   +.+...  ......-+.   ...+.+...|++|..
T Consensus         3 kgK~~lVTGas~GIG~aia~~l~~~Ga--~V~~~~r~~~--~---l~~~~~--~~~~~Dv~~~~~~~~~~~g~iD~lVnn   73 (234)
T d1o5ia_           3 RDKGVLVLAASRGIGRAVADVLSQEGA--EVTICARNEE--L---LKRSGH--RYVVCDLRKDLDLLFEKVKEVDILVLN   73 (234)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTC--EEEEEESCHH--H---HHHTCS--EEEECCTTTCHHHHHHHSCCCSEEEEC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEECCHH--H---HHhcCC--cEEEcchHHHHHHHHHHhCCCcEEEec
Confidence            456899999999999999999999998  9999999751  1   111110  010000011   234667899999999


Q ss_pred             CCCCCCCC---CCHHH---HHHHHH----HHHHHHHHHHhhhCCCeEEEEec
Q 018512          118 AGVPRKPG---MTRDD---LFNINA----GIVRTLCEGIAKCCPNATVNLIS  159 (354)
Q Consensus       118 ag~~~~~g---~~r~d---~~~~n~----~~~~~i~~~i~~~~p~a~viv~t  159 (354)
                      ||.+....   .+..+   .+..|+    ...+.+.+.+++.. .+.+|+++
T Consensus        74 AG~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~-~G~ii~i~  124 (234)
T d1o5ia_          74 AGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKG-WGRIVAIT  124 (234)
T ss_dssp             CCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEEC
T ss_pred             ccccCCcchhhhhhHHHHHHhhhhhhhhhhhhhcccccccccc-cccccccc
Confidence            98764321   22222   233443    45666677776654 45555554

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

Probab=96.78  E-value=0.012  Score=51.32  Aligned_cols=156  Identities=13%  Similarity=0.170  Sum_probs=90.0

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCCCCeEEEEeC-CCcH----------Hhhh
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLG-QPQL----------ENAL  108 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~~~~v~~~~~-~~d~----------~~al  108 (354)
                      .+.+.|+||++.+|..++..|+..|.  .|++.|+++  ++....++....  ..+..+.. -++.          .+.+
T Consensus         5 gK~alITGas~GIG~aia~~la~~Ga--~V~~~~r~~~~l~~~~~~~~~~g--~~~~~~~~Dv~~~~~v~~~~~~~~~~~   80 (260)
T d1zema1           5 GKVCLVTGAGGNIGLATALRLAEEGT--AIALLDMNREALEKAEASVREKG--VEARSYVCDVTSEEAVIGTVDSVVRDF   80 (260)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHTTT--SCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHhcC--CcEEEEEccCCCHHHHHHHHHHHHHHh
Confidence            45788999999999999999999998  899999986  333444555432  22222211 1121          2345


Q ss_pred             CCCcEEEEcCCCCCCCC----CCH---HHHHHHHH----HHHHHHHHHHhhhCCCeEEEEecCCCCCchHHHHHHHHHhC
Q 018512          109 TGMDLVIIPAGVPRKPG----MTR---DDLFNINA----GIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAG  177 (354)
Q Consensus       109 ~~aDvVIi~ag~~~~~g----~~r---~d~~~~n~----~~~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~~~~~~~~  177 (354)
                      -..|++|..||.....+    .+.   ...+..|+    ...+...+.|.+. ..+.||+++....           . .
T Consensus        81 g~iDilVnnaG~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~m~~~-~~G~II~isS~~~-----------~-~  147 (260)
T d1zema1          81 GKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQ-NYGRIVNTASMAG-----------V-K  147 (260)
T ss_dssp             SCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCHHH-----------H-S
T ss_pred             CCCCeehhhhccccccCccccccHHHHHhhccccccccccchhhHHhhhhhh-cCCCCCeeechhh-----------c-c
Confidence            68999999988653222    222   22334454    3455556666554 4667777653110           1 1


Q ss_pred             CCCCCCEEEeccchHHHHHHHHHHHhCCCCCCCcceEEe
Q 018512          178 TYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVVG  216 (354)
Q Consensus       178 ~~p~~kviG~t~ld~~r~~~~la~~l~v~~~~v~~~v~G  216 (354)
                      +.|..=.++.+.-.-..|.+.+|..++  +..|++-.+-
T Consensus       148 ~~~~~~~Y~asKaal~~ltk~lA~el~--~~gIrVN~I~  184 (260)
T d1zema1         148 GPPNMAAYGTSKGAIIALTETAALDLA--PYNIRVNAIS  184 (260)
T ss_dssp             CCTTBHHHHHHHHHHHHHHHHHHHHHG--GGTEEEEEEE
T ss_pred             CCcchHHHHHHHHHHHHHHHHHHHHhh--hhCCEEEEec
Confidence            233222333333334567788888775  4555544443

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

Probab=96.78  E-value=0.006  Score=53.62  Aligned_cols=157  Identities=14%  Similarity=0.119  Sum_probs=87.8

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCC-CCeEEEEeC-CCcH----------Hhh
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDT-GAVVRGFLG-QPQL----------ENA  107 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~-~~~v~~~~~-~~d~----------~~a  107 (354)
                      .+.+.|+||++-+|..++..|+..|.  .|++.|+++  ++....++..... ...+..+.. -++.          .+.
T Consensus         5 gK~alVTGas~GIG~aia~~la~~Ga--~V~l~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~   82 (272)
T d1xkqa_           5 NKTVIITGSSNGIGRTTAILFAQEGA--NVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQ   82 (272)
T ss_dssp             TCEEEETTCSSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCcCcHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHhcCCCCCceEEEEccCCCHHHHHHHHHHHHHH
Confidence            34788889999999999999999998  899999986  3344455555432 122333211 1221          233


Q ss_pred             hCCCcEEEEcCCCCCCC--C-----CC---HHHHHHHHHH----HHHHHHHHHhhhCCCeEEEEecCCCCCchHHHHHHH
Q 018512          108 LTGMDLVIIPAGVPRKP--G-----MT---RDDLFNINAG----IVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVF  173 (354)
Q Consensus       108 l~~aDvVIi~ag~~~~~--g-----~~---r~d~~~~n~~----~~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~~~~  173 (354)
                      +-..|++|..||.....  .     ++   ....+.-|+.    ..+...+.|++. +.++|++.|......        
T Consensus        83 ~g~iDilvnnAG~~~~~~~~~~~~d~~~~~~~~~~~vNl~~~~~~~~~~~p~m~~~-~g~iI~~~Ss~a~~~--------  153 (272)
T d1xkqa_          83 FGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVAS-KGEIVNVSSIVAGPQ--------  153 (272)
T ss_dssp             HSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEECCGGGSSS--------
T ss_pred             hCCceEEEeCCcccCcccccccchhccHHHHHHHHHhhhhHHHHHHHhhccccccc-CCccccccchhcccc--------
Confidence            45789999999875321  1     12   1223344543    555566666543 455555554211111        


Q ss_pred             HHhCCCCCCCEEEeccchHHHHHHHHHHHhCCCCCCCcceEE
Q 018512          174 KKAGTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVV  215 (354)
Q Consensus       174 ~~~~~~p~~kviG~t~ld~~r~~~~la~~l~v~~~~v~~~v~  215 (354)
                          +.|..=.++.+.-.-..|.+.+|..++  +..|++-.+
T Consensus       154 ----~~~~~~~Y~asKaal~~ltk~lA~el~--~~gIrVN~I  189 (272)
T d1xkqa_         154 ----AQPDFLYYAIAKAALDQYTRSTAIDLA--KFGIRVNSV  189 (272)
T ss_dssp             ----CCCSSHHHHHHHHHHHHHHHHHHHHHH--TTTCEEEEE
T ss_pred             ----CCCCcchhhhHHHHHHHHHHHHHHHhc--ccCeEEEEE
Confidence                222211233333334456777787764  455654444

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

Probab=96.78  E-value=0.0058  Score=53.24  Aligned_cols=154  Identities=15%  Similarity=0.123  Sum_probs=86.6

Q ss_pred             eE-EEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCCCCeEEEEe-CCCcH----------HhhhC
Q 018512           44 KV-AILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQL----------ENALT  109 (354)
Q Consensus        44 kI-~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~~~~v~~~~-~~~d~----------~~al~  109 (354)
                      || .|+||++.+|.++|..|+..|.  .|++.|+++  ++....++....  ..+..+. +-+|.          .+.+-
T Consensus         3 KValITGas~GIG~aia~~la~~Ga--~V~i~~r~~~~l~~~~~~l~~~g--~~~~~~~~Dvs~~~~v~~~~~~~~~~~g   78 (257)
T d2rhca1           3 EVALVTGATSGIGLEIARRLGKEGL--RVFVCARGEEGLRTTLKELREAG--VEADGRTCDVRSVPEIEALVAAVVERYG   78 (257)
T ss_dssp             CEEEEESCSSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHhcC--CcEEEEEeecCCHHHHHHHHHHHHHHhC
Confidence            55 6789999999999999999998  899999986  333445555432  1222221 11121          23346


Q ss_pred             CCcEEEEcCCCCCCCC---CC---HHHHHHHHHHHHHHHHHHHhhh-----CCCeEEEEecCCCCCchHHHHHHHHHhCC
Q 018512          110 GMDLVIIPAGVPRKPG---MT---RDDLFNINAGIVRTLCEGIAKC-----CPNATVNLISNPVNSTVPIAAEVFKKAGT  178 (354)
Q Consensus       110 ~aDvVIi~ag~~~~~g---~~---r~d~~~~n~~~~~~i~~~i~~~-----~p~a~viv~tNPv~~~~~~~~~~~~~~~~  178 (354)
                      ..|++|..||......   .+   ..+.+.-|+.....+.+.+-++     ...+.|++++.-....            +
T Consensus        79 ~iDilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~~~~~~~~~g~Ii~i~S~~~~~------------~  146 (257)
T d2rhca1          79 PVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQ------------G  146 (257)
T ss_dssp             SCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTSHHHHTEEEEEEECCGGGTS------------C
T ss_pred             CCCEEEecccccCCCChHHcCHHHHHHHHHHHhhhhhHHHHHHhHHHHHHhcCCccccccccccccc------------c
Confidence            7999999998754321   22   2344566766666666555432     2345566654321111            2


Q ss_pred             CCCCCEEEeccchHHHHHHHHHHHhCCCCCCCcceEE
Q 018512          179 YDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVV  215 (354)
Q Consensus       179 ~p~~kviG~t~ld~~r~~~~la~~l~v~~~~v~~~v~  215 (354)
                      .|..=.++.+.-.-..|.+.+|..++  +..|++-.+
T Consensus       147 ~~~~~~Y~asKaal~~ltk~lA~el~--~~gIrVN~I  181 (257)
T d2rhca1         147 VVHAAPYSASKHGVVGFTKALGLELA--RTGITVNAV  181 (257)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHTT--TSEEEEEEE
T ss_pred             cccchhHHHHHHHHHHHHHHHHHHhh--hhCcEEEEE
Confidence            22211223332233457788888774  455544444

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.73  E-value=0.013  Score=50.60  Aligned_cols=117  Identities=19%  Similarity=0.244  Sum_probs=74.0

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCCCCeEEEE-eCCCcH----------HhhhC
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGF-LGQPQL----------ENALT  109 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~~~~v~~~-~~~~d~----------~~al~  109 (354)
                      +.+.|+||++-+|..+|..|++.|.  .|++.|+++  ++..+.++....  ..+..+ .+-+|.          .+.+.
T Consensus         8 kv~lITGas~GIG~~ia~~la~~G~--~V~l~~r~~~~l~~~~~~~~~~~--~~~~~~~~Dvs~~~~v~~~~~~i~~~~g   83 (244)
T d1yb1a_           8 EIVLITGAGHGIGRLTAYEFAKLKS--KLVLWDINKHGLEETAAKCKGLG--AKVHTFVVDCSNREDIYSSAKKVKAEIG   83 (244)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHhcC--CcEEEEEeeCCCHHHHHHHHHHHHHHcC
Confidence            4688889999999999999999998  999999986  334444554332  222222 122232          23456


Q ss_pred             CCcEEEEcCCCCCCCCC--C----HHHHHHHH----HHHHHHHHHHHhhhCCCeEEEEecCCCCC
Q 018512          110 GMDLVIIPAGVPRKPGM--T----RDDLFNIN----AGIVRTLCEGIAKCCPNATVNLISNPVNS  164 (354)
Q Consensus       110 ~aDvVIi~ag~~~~~g~--~----r~d~~~~n----~~~~~~i~~~i~~~~p~a~viv~tNPv~~  164 (354)
                      ..|++|..||.......  .    ..+.+.-|    +...+.+.+.|.+. ..+.|++++.....
T Consensus        84 ~idilinnag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-~~G~Iv~isS~~~~  147 (244)
T d1yb1a_          84 DVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKN-NHGHIVTVASAAGH  147 (244)
T ss_dssp             CCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-TCEEEEEECCCC-C
T ss_pred             CCceeEeeccccccccccccchhHHHhhcceeeeccHHHHHHHhhhHHhc-CCceEEEeecchhc
Confidence            79999999987543321  1    12233334    45666777777655 46777777655544

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

Probab=96.69  E-value=0.014  Score=50.76  Aligned_cols=115  Identities=14%  Similarity=0.186  Sum_probs=70.2

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCCCCeEEEEe-CCCcH----------Hhhh
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQL----------ENAL  108 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~~~~v~~~~-~~~d~----------~~al  108 (354)
                      .+.+.|+||++.+|..++..|+..|.  .|++.|+++  ......++.... ...+..+. +-++.          .+.+
T Consensus         9 gK~alITGas~GIG~aia~~la~~Ga--~V~i~~r~~~~~~~~~~~~~~~~-g~~~~~~~~Dv~~~~~v~~~~~~~~~~~   85 (260)
T d1h5qa_           9 NKTIIVTGGNRGIGLAFTRAVAAAGA--NVAVIYRSAADAVEVTEKVGKEF-GVKTKAYQCDVSNTDIVTKTIQQIDADL   85 (260)
T ss_dssp             TEEEEEETTTSHHHHHHHHHHHHTTE--EEEEEESSCTTHHHHHHHHHHHH-TCCEEEEECCTTCHHHHHHHHHHHHHHS
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHHHh-CCceEEEEccCCCHHHHHHHHHHHHHHh
Confidence            34788999999999999999999998  899999987  222233332211 11122211 11121          2345


Q ss_pred             CCCcEEEEcCCCCCCCC---CCHH---HHHHHHH----HHHHHHHHHHhhhCCCeEEEEec
Q 018512          109 TGMDLVIIPAGVPRKPG---MTRD---DLFNINA----GIVRTLCEGIAKCCPNATVNLIS  159 (354)
Q Consensus       109 ~~aDvVIi~ag~~~~~g---~~r~---d~~~~n~----~~~~~i~~~i~~~~p~a~viv~t  159 (354)
                      -..|++|..||......   .+..   ..+..|+    ...+.+++.+.+....+.+++.+
T Consensus        86 g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~~g~i~~~~  146 (260)
T d1h5qa_          86 GPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTS  146 (260)
T ss_dssp             CSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEEC
T ss_pred             CCCcEecccccccccCCHHHhccccccccccccccchhhhhhhhcccccccccceEEEEee
Confidence            68999999988653221   2222   2344454    45566777777666677666654

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

Probab=96.68  E-value=0.01  Score=51.75  Aligned_cols=155  Identities=13%  Similarity=0.077  Sum_probs=85.0

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCCCCeEEEEe-CCCcH----------Hhhh
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQL----------ENAL  108 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~~~~v~~~~-~~~d~----------~~al  108 (354)
                      .+.+.|+||++-+|..++..|+..|.  .|++.|+++  ++....++....  .....+. +-+|.          .+.+
T Consensus         8 GK~alITGas~GIG~aia~~la~~Ga--~V~~~~r~~~~l~~~~~~~~~~g--~~~~~~~~Dv~~~~~v~~~~~~~~~~~   83 (259)
T d2ae2a_           8 GCTALVTGGSRGIGYGIVEELASLGA--SVYTCSRNQKELNDCLTQWRSKG--FKVEASVCDLSSRSERQELMNTVANHF   83 (259)
T ss_dssp             TCEEEEESCSSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHTT--CEEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHhcC--CCceEEEeeCCCHHHHHHHHHHHHHHh
Confidence            45789999999999999999999998  899999976  333334444332  2222221 11121          1223


Q ss_pred             C-CCcEEEEcCCCCCCCC---CCH---HHHHHHHHH----HHHHHHHHHhhhCCCeEEEEecCCCCCchHHHHHHHHHhC
Q 018512          109 T-GMDLVIIPAGVPRKPG---MTR---DDLFNINAG----IVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAG  177 (354)
Q Consensus       109 ~-~aDvVIi~ag~~~~~g---~~r---~d~~~~n~~----~~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~~~~~~~~  177 (354)
                      . ..|++|..||......   .+.   ...+.-|+.    ..+...+.+++. ..+.||+++.-....            
T Consensus        84 ~~~idilvnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~-~~G~Ii~isS~~~~~------------  150 (259)
T d2ae2a_          84 HGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKAS-ERGNVVFISSVSGAL------------  150 (259)
T ss_dssp             TTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-SSEEEEEECCGGGTS------------
T ss_pred             CCCceEEEECCceeccCccccCCHHHHHHHHhcccceeEEEEeeccchhhhh-ccccccccccccccc------------
Confidence            3 4799999998654322   222   234455544    344455555443 456666665322111            


Q ss_pred             CCCCCCEEEeccchHHHHHHHHHHHhCCCCCCCcceEE
Q 018512          178 TYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVV  215 (354)
Q Consensus       178 ~~p~~kviG~t~ld~~r~~~~la~~l~v~~~~v~~~v~  215 (354)
                      +.|..-.++.+.-.-..|.+.+|..++  +..|++-.+
T Consensus       151 ~~~~~~~Y~asKaal~~lt~~lA~el~--~~gIrVN~I  186 (259)
T d2ae2a_         151 AVPYEAVYGATKGAMDQLTRCLAFEWA--KDNIRVNGV  186 (259)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHHHHHHTG--GGTEEEEEE
T ss_pred             ccccccchHHHHHHHHHHHHHHHHHhC--cCceEEEEe
Confidence            122211222232233456777887764  445544333

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

Probab=96.68  E-value=0.033  Score=47.98  Aligned_cols=155  Identities=17%  Similarity=0.188  Sum_probs=86.3

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEe-CCCcH----------HhhhCC
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFL-GQPQL----------ENALTG  110 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~-~~~d~----------~~al~~  110 (354)
                      .+.+.|+||++.+|..++..|+..|.  .|++.|+++.+.....+....  ..+..+. +-+|.          .+.+-.
T Consensus         5 gKvalVTGas~GIG~aia~~la~~Ga--~V~~~~~~~~~~~~~~~~~~g--~~~~~~~~Dvs~~~~v~~~~~~~~~~~G~   80 (247)
T d2ew8a1           5 DKLAVITGGANGIGRAIAERFAVEGA--DIAIADLVPAPEAEAAIRNLG--RRVLTVKCDVSQPGDVEAFGKQVISTFGR   80 (247)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESSCCHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCC--EEEEEECCchHHHHHHHHHcC--CcEEEEEeeCCCHHHHHHHHHHHHHHcCC
Confidence            45788899999999999999999998  899999987332222233322  1222211 11221          233468


Q ss_pred             CcEEEEcCCCCCCCC---CCH---HHHHHHH----HHHHHHHHHHHhhhCCCeEEEEecCCCCCchHHHHHHHHHhCCCC
Q 018512          111 MDLVIIPAGVPRKPG---MTR---DDLFNIN----AGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYD  180 (354)
Q Consensus       111 aDvVIi~ag~~~~~g---~~r---~d~~~~n----~~~~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~~~~~~~~~~p  180 (354)
                      .|++|..||......   .+.   ...+.-|    ....+.+++.|++.. .+.||++|.-....            +.|
T Consensus        81 iDilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~G~Iv~isS~~~~~------------~~~  147 (247)
T d2ew8a1          81 CDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNG-WGRIINLTSTTYWL------------KIE  147 (247)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGGS------------CCS
T ss_pred             CCEEEECCCCCCCCChHhCCHHHhhhhheeehhhhhHHHHHHHhHHHhcC-CCCccccccchhcc------------cCc
Confidence            999999998753221   222   2233444    455566666776654 56666665322111            222


Q ss_pred             CCCEEEeccchHHHHHHHHHHHhCCCCCCCcceEE
Q 018512          181 PKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVV  215 (354)
Q Consensus       181 ~~kviG~t~ld~~r~~~~la~~l~v~~~~v~~~v~  215 (354)
                      ..-.++.+.-.-..|.+.+|..++  +..|++-.+
T Consensus       148 ~~~~Y~asKaal~~ltk~lA~ela--~~gIrVN~I  180 (247)
T d2ew8a1         148 AYTHYISTKAANIGFTRALASDLG--KDGITVNAI  180 (247)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHHHG--GGTEEEEEE
T ss_pred             ccccchhhhccHHHHHHHHHHHhc--ccCeEEEEE
Confidence            211223332233456777787764  445544444

>d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Siroheme synthase CysG, domain 1
species: Salmonella typhimurium [TaxId: 90371]

Probab=96.68  E-value=0.012  Score=44.56  Aligned_cols=69  Identities=17%  Similarity=0.145  Sum_probs=47.5

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcC
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA  118 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~a  118 (354)
                      ..||.|+|+ |.+|..-+..|+..|.  .|.+++....... ..+.+..   .++......+ ++.+.++++|+.+.
T Consensus        12 ~k~vlVvG~-G~va~~ka~~ll~~ga--~v~v~~~~~~~~~-~~~~~~~---~i~~~~~~~~-~~dl~~~~lv~~at   80 (113)
T d1pjqa1          12 DRDCLIVGG-GDVAERKARLLLEAGA--RLTVNALTFIPQF-TVWANEG---MLTLVEGPFD-ETLLDSCWLAIAAT   80 (113)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTB--EEEEEESSCCHHH-HHHHTTT---SCEEEESSCC-GGGGTTCSEEEECC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCC--eEEEEeccCChHH-HHHHhcC---CceeeccCCC-HHHhCCCcEEeecC
Confidence            459999999 9999999999999987  8999998653322 2233322   1222212222 46799999999874

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=96.66  E-value=0.00039  Score=60.16  Aligned_cols=158  Identities=15%  Similarity=0.057  Sum_probs=79.8

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCe-EEEE-eCCCcHHhh--hCCCcEEEEcC
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAV-VRGF-LGQPQLENA--LTGMDLVIIPA  118 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~-v~~~-~~~~d~~~a--l~~aDvVIi~a  118 (354)
                      -||.|+||+|.+|..++..|++.|.  +|+++|+++... ..+......... .... .......+.  ...-|++|..|
T Consensus         3 gkVlITGas~GIG~aia~~l~~~G~--~V~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iD~linnA   79 (235)
T d1ooea_           3 GKVIVYGGKGALGSAILEFFKKNGY--TVLNIDLSANDQ-ADSNILVDGNKNWTEQEQSILEQTASSLQGSQVDGVFCVA   79 (235)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTE--EEEEEESSCCTT-SSEEEECCTTSCHHHHHHHHHHHHHHHHTTCCEEEEEECC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCC--EEEEEECCchhc-ccccceeccccCchhHHHHHHHHHHHHhcCCCeeEEEECC
Confidence            3899999999999999999999997  899999975210 000000000000 0000 000011122  24479999999


Q ss_pred             CCCCC--C-CCC----HHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecCCCCCchHHHHHHHHHhCCCCCCCEEEeccc
Q 018512          119 GVPRK--P-GMT----RDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTML  190 (354)
Q Consensus       119 g~~~~--~-g~~----r~d~~~~n~~~~~~i~~~i~~~~-p~a~viv~tNPv~~~~~~~~~~~~~~~~~p~~kviG~t~l  190 (354)
                      |....  + ..+    ....+..|+.....+++.+..+- +.+.|+++|-....            .+.|..=.++.+.-
T Consensus        80 G~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~Iv~isS~~~~------------~~~~~~~~Y~asKa  147 (235)
T d1ooea_          80 GGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAAM------------GPTPSMIGYGMAKA  147 (235)
T ss_dssp             CCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGG------------SCCTTBHHHHHHHH
T ss_pred             cccccccccccCcHHHHhhHhhhHHHHHHHHhhhcccccccceEEEEeccHHhc------------CCcccccchHHHHH
Confidence            85321  1 122    12235566655544444444443 35677776532111            12222112222332


Q ss_pred             hHHHHHHHHHHHhCCCCCCCcceEE
Q 018512          191 DVVRANTFVAEVLGLDPRDVDVPVV  215 (354)
Q Consensus       191 d~~r~~~~la~~l~v~~~~v~~~v~  215 (354)
                      .-..|.+.+|..++-.+..|++..+
T Consensus       148 al~~l~~~la~e~~~~~~~i~v~~i  172 (235)
T d1ooea_         148 AVHHLTSSLAAKDSGLPDNSAVLTI  172 (235)
T ss_dssp             HHHHHHHHHHSTTSSCCTTCEEEEE
T ss_pred             HHHHHHHHHHHHhccCCCceEEEEE
Confidence            3345666777666533455554444

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=96.65  E-value=0.00042  Score=60.06  Aligned_cols=159  Identities=13%  Similarity=0.063  Sum_probs=81.2

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCch-hHHHHHhcCCCC-C-eEEEEeCCCcHHhhhC--CCcEEEE
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP-GVTADISHMDTG-A-VVRGFLGQPQLENALT--GMDLVII  116 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~-g~~~dl~~~~~~-~-~v~~~~~~~d~~~al~--~aDvVIi  116 (354)
                      .++|.|+||+|.+|..++..|+..|.  .|+++|+++.. .......+.... . .....  .....+.+.  ..|++|+
T Consensus         2 gK~vlITGas~GIG~a~a~~l~~~G~--~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~iD~lIn   77 (236)
T d1dhra_           2 ARRVLVYGGRGALGSRCVQAFRARNW--WVASIDVVENEEASASVIVKMTDSFTEQADQV--TAEVGKLLGDQKVDAILC   77 (236)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHTTTC--EEEEEESSCCTTSSEEEECCCCSCHHHHHHHH--HHHHHHHHTTCCEEEEEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCC--EEEEEeCCccccccccceeecccCcHHHHHHH--HHHHHHHhCCCCceEEEE
Confidence            46999999999999999999999998  89999987521 000000000000 0 00000  001112222  4799999


Q ss_pred             cCCCCC--CC-CCC----HHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecCCCCCchHHHHHHHHHhCCCCCCCEEEec
Q 018512          117 PAGVPR--KP-GMT----RDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVT  188 (354)
Q Consensus       117 ~ag~~~--~~-g~~----r~d~~~~n~~~~~~i~~~i~~~~-p~a~viv~tNPv~~~~~~~~~~~~~~~~~p~~kviG~t  188 (354)
                      .||...  .. ...    ....+..|+.....+++.+.++- ..+.|+++|.-...            .+.|..-.++.+
T Consensus        78 nAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~G~Iv~isS~~~~------------~~~~~~~~Y~as  145 (236)
T d1dhra_          78 VAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAAL------------DGTPGMIGYGMA  145 (236)
T ss_dssp             CCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGG------------SCCTTBHHHHHH
T ss_pred             CCcccccccchhcCCHHHHHHHHHHcchHHHHHHHHHHHhcccccceeEEccHHHc------------CCccCCcccHHH
Confidence            988422  11 112    12234556655555555555443 45777776532111            122222122233


Q ss_pred             cchHHHHHHHHHHHhCCCCCCCcceEEe
Q 018512          189 MLDVVRANTFVAEVLGLDPRDVDVPVVG  216 (354)
Q Consensus       189 ~ld~~r~~~~la~~l~v~~~~v~~~v~G  216 (354)
                      .-.-..|.+.+|..++-.+..|++..+.
T Consensus       146 Kaal~~lt~~la~El~~~~~gI~vn~v~  173 (236)
T d1dhra_         146 KGAVHQLCQSLAGKNSGMPSGAAAIAVL  173 (236)
T ss_dssp             HHHHHHHHHHHTSTTSSCCTTCEEEEEE
T ss_pred             HHHHHHHHHHHHHHhccCCCcEEEEEEE
Confidence            3233455666666665335566655554

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=96.63  E-value=0.017  Score=50.16  Aligned_cols=155  Identities=15%  Similarity=0.163  Sum_probs=87.8

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCCCCeEEEEe-CCCcH----------Hhhh
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQL----------ENAL  108 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~~~~v~~~~-~~~d~----------~~al  108 (354)
                      .+.+.|+||++.+|..+|..|+..|.  .|++.|+++  ++..+.++....  ..+..+. +-++.          .+.+
T Consensus        11 gK~alITGas~GIG~aia~~la~~Ga--~V~~~~r~~~~~~~~~~~l~~~g--~~~~~~~~Dvs~~~~~~~~~~~~~~~~   86 (255)
T d1fmca_          11 GKCAIITGAGAGIGKEIAITFATAGA--SVVVSDINADAANHVVDEIQQLG--GQAFACRCDITSEQELSALADFAISKL   86 (255)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHTTTC--EEEEEESCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHHcC--CcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            45788999999999999999999998  899999876  233344455432  1222211 11221          2335


Q ss_pred             CCCcEEEEcCCCCCCC--CCCHHH---HHHHH----HHHHHHHHHHHhhhCCCeEEEEecCCCCCchHHHHHHHHHhCCC
Q 018512          109 TGMDLVIIPAGVPRKP--GMTRDD---LFNIN----AGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTY  179 (354)
Q Consensus       109 ~~aDvVIi~ag~~~~~--g~~r~d---~~~~n----~~~~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~~~~~~~~~~  179 (354)
                      ..-|++|..||.....  ..+..+   .+.-|    ....+.+++.+++.. .+.||++|.-....            +.
T Consensus        87 g~iDilvnnAG~~~~~~~e~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~g~Ii~isS~~~~~------------~~  153 (255)
T d1fmca_          87 GKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNG-GGVILTITSMAAEN------------KN  153 (255)
T ss_dssp             SSCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTC------------CC
T ss_pred             CCCCEeeeCCcCCCCCcccCCHHHHHHHHHHHHHHhhhhHHHHHhhhcccc-ccccccccccchhc------------cc
Confidence            6899999999865321  233322   33445    345556667776654 45555554311111            12


Q ss_pred             CCCCEEEeccchHHHHHHHHHHHhCCCCCCCcceEE
Q 018512          180 DPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVV  215 (354)
Q Consensus       180 p~~kviG~t~ld~~r~~~~la~~l~v~~~~v~~~v~  215 (354)
                      |..=.++.+.-.-..|.+.+|..++  +..|++-.+
T Consensus       154 ~~~~~Y~asKaal~~lt~~lA~el~--~~gIrVN~I  187 (255)
T d1fmca_         154 INMTSYASSKAAASHLVRNMAFDLG--EKNIRVNGI  187 (255)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHHH--TTTEEEEEE
T ss_pred             cccccchhHHHHHHHHHHHHHHHhC--ccCeEEEEe
Confidence            2222233333334456777887774  455544444

>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD
species: Escherichia coli [TaxId: 562]

Probab=96.63  E-value=0.0011  Score=48.86  Aligned_cols=73  Identities=19%  Similarity=0.270  Sum_probs=49.8

Q ss_pred             CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcCCC
Q 018512           41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGV  120 (354)
Q Consensus        41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~ag~  120 (354)
                      +..||+|+|. |..|.++|..|...+.  ++.++|.+.......++.+   ...+..  ...+ ...+.++|+||++-|.
T Consensus         4 ~~K~v~ViGl-G~sG~s~a~~L~~~g~--~v~~~D~~~~~~~~~~~~~---~~~~~~--~~~~-~~~~~~~d~vi~SPGi   74 (93)
T d2jfga1           4 QGKNVVIIGL-GLTGLSCVDFFLARGV--TPRVMDTRMTPPGLDKLPE---AVERHT--GSLN-DEWLMAADLIVASPGI   74 (93)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHTTC--CCEEEESSSSCTTGGGSCT---TSCEEE--SBCC-HHHHHHCSEEEECTTS
T ss_pred             CCCEEEEEeE-CHHHHHHHHHHHHCCC--EEEEeeCCcCchhHHHHhh---ccceee--cccc-hhhhccCCEEEECCCC
Confidence            3458999999 9999999999999987  8999998652111111221   122222  1112 4568899999999887


Q ss_pred             CC
Q 018512          121 PR  122 (354)
Q Consensus       121 ~~  122 (354)
                      |.
T Consensus        75 ~~   76 (93)
T d2jfga1          75 AL   76 (93)
T ss_dssp             CT
T ss_pred             CC
Confidence            74

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=96.62  E-value=0.019  Score=49.72  Aligned_cols=154  Identities=16%  Similarity=0.200  Sum_probs=88.4

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCCCCeEEEEe-CCCcH----------HhhhC
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQL----------ENALT  109 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~~~~v~~~~-~~~d~----------~~al~  109 (354)
                      +.+.|+||++.+|..++..|+..|.  .|++.|+++  ++..+.++.....  .+..+. +-+|.          .+.+.
T Consensus        11 KvalITGas~GIG~a~a~~la~~Ga--~V~~~~r~~~~l~~~~~~l~~~g~--~~~~~~~Dvt~~~~v~~~~~~~~~~~g   86 (251)
T d2c07a1          11 KVALVTGAGRGIGREIAKMLAKSVS--HVICISRTQKSCDSVVDEIKSFGY--ESSGYAGDVSKKEEISEVINKILTEHK   86 (251)
T ss_dssp             CEEEEESTTSHHHHHHHHHHTTTSS--EEEEEESSHHHHHHHHHHHHTTTC--CEEEEECCTTCHHHHHHHHHHHHHHCS
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHcCC--EEEEEECCHHHHHHHHHHHHhcCC--cEEEEEccCCCHHHHHHHHHHHHHhcC
Confidence            3566779999999999999999887  899999976  3344455654332  222221 11221          23346


Q ss_pred             CCcEEEEcCCCCCCCC---CCH---HHHHHHH----HHHHHHHHHHHhhhCCCeEEEEecCCCCCchHHHHHHHHHhCCC
Q 018512          110 GMDLVIIPAGVPRKPG---MTR---DDLFNIN----AGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTY  179 (354)
Q Consensus       110 ~aDvVIi~ag~~~~~g---~~r---~d~~~~n----~~~~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~~~~~~~~~~  179 (354)
                      .-|++|..||......   .+.   ...+.-|    ....+..++.+++.. .+.||++|....          ..  +.
T Consensus        87 ~iDilvnnag~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~G~IVnisS~~~----------~~--~~  153 (251)
T d2c07a1          87 NVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNR-YGRIINISSIVG----------LT--GN  153 (251)
T ss_dssp             CCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHT-CEEEEEECCTHH----------HH--CC
T ss_pred             CceeeeeccccccccccccccHHHHhhhheeeehhhhhhhhhcCcccccCC-CeEEEEECCHHh----------cC--CC
Confidence            8999999988654322   222   2333445    344566666676653 566777653211          11  23


Q ss_pred             CCCCEEEeccchHHHHHHHHHHHhCCCCCCCcceEE
Q 018512          180 DPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVV  215 (354)
Q Consensus       180 p~~kviG~t~ld~~r~~~~la~~l~v~~~~v~~~v~  215 (354)
                      |..=.++.+.-.-..|.+.+|..++  +..|++-.+
T Consensus       154 ~~~~~Y~asKaal~~ltr~lA~el~--~~gIrVN~V  187 (251)
T d2c07a1         154 VGQANYSSSKAGVIGFTKSLAKELA--SRNITVNAI  187 (251)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHHG--GGTEEEEEE
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHhh--hhCeEEEEE
Confidence            3222344443334557788888774  444544433

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.61  E-value=0.00059  Score=59.57  Aligned_cols=155  Identities=16%  Similarity=0.154  Sum_probs=85.5

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCC-----CcHHhhhCCCcEEEE
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQ-----PQLENALTGMDLVII  116 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~-----~d~~~al~~aDvVIi  116 (354)
                      .+.+.|+||++.+|.+++..|+..|.  +|++.|+++.  ...++.+.. ..........     ....+.+...|++|.
T Consensus         6 gK~alITGas~GIG~aia~~la~~G~--~Vi~~~r~~~--~l~~~~~~~-~~~~~~~d~~~~~~~~~~~~~~~~id~lVn   80 (245)
T d2ag5a1           6 GKVIILTAAAQGIGQAAALAFAREGA--KVIATDINES--KLQELEKYP-GIQTRVLDVTKKKQIDQFANEVERLDVLFN   80 (245)
T ss_dssp             TCEEEESSTTSHHHHHHHHHHHHTTC--EEEEEESCHH--HHGGGGGST-TEEEEECCTTCHHHHHHHHHHCSCCSEEEE
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHcCC--EEEEEeCCHH--HHHHHHhcc-CCceeeeeccccccccccccccccceeEEe
Confidence            34688889999999999999999998  9999999752  112222221 1111111000     112344578999999


Q ss_pred             cCCCCCCCC---CCHH---HHHHHH----HHHHHHHHHHHhhhCCCeEEEEecCCCCCchHHHHHHHHHhCCCCCCCEEE
Q 018512          117 PAGVPRKPG---MTRD---DLFNIN----AGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLG  186 (354)
Q Consensus       117 ~ag~~~~~g---~~r~---d~~~~n----~~~~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~~~~~~~~~~p~~kviG  186 (354)
                      .+|......   .+..   ..+.-|    ....+.+.+.+.+. +.+.|++++.......           +.+..-.++
T Consensus        81 ~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~-~~g~Ii~isS~~~~~~-----------~~~~~~~Y~  148 (245)
T d2ag5a1          81 VAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQ-KSGNIINMSSVASSVK-----------GVVNRCVYS  148 (245)
T ss_dssp             CCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCSBTTTB-----------CCTTBHHHH
T ss_pred             cccccCCCChhhCCHHHHHHHHHHhhccchhHHHhhCcccccC-CCceeeeeechhhccC-----------CccchhHHH
Confidence            998764321   2222   223334    34555556666544 4666676654332211           222222233


Q ss_pred             eccchHHHHHHHHHHHhCCCCCCCcceEE
Q 018512          187 VTMLDVVRANTFVAEVLGLDPRDVDVPVV  215 (354)
Q Consensus       187 ~t~ld~~r~~~~la~~l~v~~~~v~~~v~  215 (354)
                      .+.-.-..+.+.+|..++  +..|++-.+
T Consensus       149 ~sKaal~~l~r~lA~e~~--~~gIrvN~I  175 (245)
T d2ag5a1         149 TTKAAVIGLTKSVAADFI--QQGIRCNCV  175 (245)
T ss_dssp             HHHHHHHHHHHHHHHHHG--GGTEEEEEE
T ss_pred             HHHHHHHHHHHHHHHHhh--hhCcEEEEE
Confidence            333234557788888875  445544433

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

Probab=96.60  E-value=0.0098  Score=52.26  Aligned_cols=115  Identities=17%  Similarity=0.246  Sum_probs=69.4

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCCC-CeEEEEeC-CCc---H-------Hhh
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTG-AVVRGFLG-QPQ---L-------ENA  107 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~~-~~v~~~~~-~~d---~-------~~a  107 (354)
                      .+.+.|+||++.+|.++|..|+..|.  .|++.|+++  ++..+.++...... ..+..+.. -++   .       .+.
T Consensus         4 gK~alITGas~GIG~aia~~la~~Ga--~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   81 (274)
T d1xhla_           4 GKSVIITGSSNGIGRSAAVIFAKEGA--QVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAK   81 (274)
T ss_dssp             TCEEEETTCSSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHHcCCCCcceEEEEeeCCCHHHHHHHHHHHHHH
Confidence            45789999999999999999999998  899999986  33444455543221 22333211 112   1       123


Q ss_pred             hCCCcEEEEcCCCCCCCC-----CCHH---HHHHHHH----HHHHHHHHHHhhhCCCeEEEEec
Q 018512          108 LTGMDLVIIPAGVPRKPG-----MTRD---DLFNINA----GIVRTLCEGIAKCCPNATVNLIS  159 (354)
Q Consensus       108 l~~aDvVIi~ag~~~~~g-----~~r~---d~~~~n~----~~~~~i~~~i~~~~p~a~viv~t  159 (354)
                      +-..|++|..||.....+     ++..   ..+.-|+    ...+...+.|.+ ...+.|++.|
T Consensus        82 ~G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~-~~~g~ii~~s  144 (274)
T d1xhla_          82 FGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIK-TKGEIVNVSS  144 (274)
T ss_dssp             HSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHH-TTCEEEEECC
T ss_pred             cCCceEEEeecccccccccccccCCHHHHHHHHhhcccccccccccccccccc-cccccccchh
Confidence            457899999988643221     2222   2234444    355556666654 3466666654

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

Probab=96.59  E-value=0.0024  Score=55.63  Aligned_cols=157  Identities=15%  Similarity=0.141  Sum_probs=85.5

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc-hhHHHHHhcCCCCCeEEEEeC----CCcHHhhhCCCcEEEE
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT-PGVTADISHMDTGAVVRGFLG----QPQLENALTGMDLVII  116 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~-~g~~~dl~~~~~~~~v~~~~~----~~d~~~al~~aDvVIi  116 (354)
                      .+.+.|+||++.+|..++..|+..|.  .|++.|+++. ......+.......++.....    -....+.+-..|++|.
T Consensus         5 GK~alITGas~GIG~aia~~la~~G~--~V~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDiLVn   82 (248)
T d2d1ya1           5 GKGVLVTGGARGIGRAIAQAFAREGA--LVALCDLRPEGKEVAEAIGGAFFQVDLEDERERVRFVEEAAYALGRVDVLVN   82 (248)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESSTTHHHHHHHHTCEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHHHHhcCCCCeEEE
Confidence            45789999999999999999999998  8999999872 222222211100001100000    0012344578999999


Q ss_pred             cCCCCCCC---CCCHH---HHHHHHH----HHHHHHHHHHhhhCCCeEEEEecCCCCCchHHHHHHHHHhCCCCCCCEEE
Q 018512          117 PAGVPRKP---GMTRD---DLFNINA----GIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLG  186 (354)
Q Consensus       117 ~ag~~~~~---g~~r~---d~~~~n~----~~~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~~~~~~~~~~p~~kviG  186 (354)
                      .||.....   ..+..   ..+.-|+    ...+...+.|++. ..+.||+++......            +.|..-.++
T Consensus        83 nAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~-~~G~Ii~isS~~~~~------------~~~~~~~Y~  149 (248)
T d2d1ya1          83 NAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKV-GGGAIVNVASVQGLF------------AEQENAAYN  149 (248)
T ss_dssp             CCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTT-TCEEEEEECCGGGTS------------BCTTBHHHH
T ss_pred             eCcCCCCCChhhCCHHHHHHHHHhhhhhHhhhhhhhccccccc-ccccccccccccccc------------cccccchhH
Confidence            99864321   12222   2334454    4555666666554 356777776432211            222222223


Q ss_pred             eccchHHHHHHHHHHHhCCCCCCCcceEE
Q 018512          187 VTMLDVVRANTFVAEVLGLDPRDVDVPVV  215 (354)
Q Consensus       187 ~t~ld~~r~~~~la~~l~v~~~~v~~~v~  215 (354)
                      .+.-.-..|.+.+|..++  +..|++-.+
T Consensus       150 asKaal~~ltk~lA~el~--~~gIrVN~I  176 (248)
T d2d1ya1         150 ASKGGLVNLTRSLALDLA--PLRIRVNAV  176 (248)
T ss_dssp             HHHHHHHHHHHHHHHHHG--GGTEEEEEE
T ss_pred             HHHHHHHHHHHHHHHHhh--hhCcEEEEE
Confidence            332233456778888775  445544433

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.58  E-value=0.0054  Score=53.76  Aligned_cols=113  Identities=16%  Similarity=0.192  Sum_probs=65.9

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCCCCeEEEEeC-CCc----------HHhhh
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLG-QPQ----------LENAL  108 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~~~~v~~~~~-~~d----------~~~al  108 (354)
                      .+++.|+||++.+|.++|..|+..|.  .|++.|+++  ++....++.... ...+..+.. ..+          ..+.+
T Consensus        14 GK~alITGassGIG~aiA~~la~~G~--~Vil~~r~~~~l~~~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~~~~~~~   90 (269)
T d1xu9a_          14 GKKVIVTGASKGIGREMAYHLAKMGA--HVVVTARSKETLQKVVSHCLELG-AASAHYIAGTMEDMTFAEQFVAQAGKLM   90 (269)
T ss_dssp             TCEEEESSCSSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHHT-CSEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHhhhh-cccchhhhhhhhhHHHHHHHHHHHHHHh
Confidence            35799999999999999999999998  999999986  233333333221 122222111 111          12334


Q ss_pred             CCCcEEEEcCCCCCCC---CCCHH---HHHHHH----HHHHHHHHHHHhhhCCCeEEEEec
Q 018512          109 TGMDLVIIPAGVPRKP---GMTRD---DLFNIN----AGIVRTLCEGIAKCCPNATVNLIS  159 (354)
Q Consensus       109 ~~aDvVIi~ag~~~~~---g~~r~---d~~~~n----~~~~~~i~~~i~~~~p~a~viv~t  159 (354)
                      ...|+++..||.....   ..+..   ..+.-|    +...+.+.+.|++.  ++.+++++
T Consensus        91 g~~~~li~nag~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~lp~m~~~--~G~ii~is  149 (269)
T d1xu9a_          91 GGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQS--NGSIVVVS  149 (269)
T ss_dssp             TSCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEEEEE
T ss_pred             CCccccccccccccccccccCCHHHhhhheeeehhhHHHHHHHHHHHHHhc--CCcceEec
Confidence            5789999988754321   12222   223334    34556666666543  45566654

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

Probab=96.58  E-value=0.02  Score=49.66  Aligned_cols=115  Identities=17%  Similarity=0.148  Sum_probs=68.3

Q ss_pred             CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC-chhHHHHHhcCCCCCeEEEEe--CCCcH----------Hhh
Q 018512           41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN-TPGVTADISHMDTGAVVRGFL--GQPQL----------ENA  107 (354)
Q Consensus        41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~-~~g~~~dl~~~~~~~~v~~~~--~~~d~----------~~a  107 (354)
                      +.+.|.|+||++-+|..+|..|+..|.  .+++++++. ......++........+..+.  .+.+.          .+.
T Consensus         4 ~gK~vlITGgs~GIG~~~A~~la~~G~--~vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~   81 (254)
T d1sbya1           4 TNKNVIFVAALGGIGLDTSRELVKRNL--KNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQ   81 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTCC--SEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCC--EEEEEECCcccHHHHHHHHhhCCCCCEEEEEeecCCCHHHHHHHHHHHHHH
Confidence            345899999999999999999999997  666665443 222222222211122222211  11121          233


Q ss_pred             hCCCcEEEEcCCCCCCCCCCHHHHHHHHH----HHHHHHHHHHhhh--CCCeEEEEec
Q 018512          108 LTGMDLVIIPAGVPRKPGMTRDDLFNINA----GIVRTLCEGIAKC--CPNATVNLIS  159 (354)
Q Consensus       108 l~~aDvVIi~ag~~~~~g~~r~d~~~~n~----~~~~~i~~~i~~~--~p~a~viv~t  159 (354)
                      +...|++|..||....  ......+.-|+    ...+.+.+.|.+.  ++.+.||+++
T Consensus        82 ~g~iDilvnnAG~~~~--~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~~~g~Ii~is  137 (254)
T d1sbya1          82 LKTVDILINGAGILDD--HQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANIC  137 (254)
T ss_dssp             HSCCCEEEECCCCCCT--TCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEEC
T ss_pred             cCCCCEEEeCCCCCCH--HHHHHHHHHHhHHHHHHHHHHHHHhhhcccCCCceEEEEe
Confidence            4689999999986532  23444555554    4666777777654  3567777775

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

Probab=96.56  E-value=0.021  Score=49.59  Aligned_cols=155  Identities=12%  Similarity=0.068  Sum_probs=85.3

Q ss_pred             CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCCCCeEEEE-eCCCcH----------Hhh
Q 018512           41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGF-LGQPQL----------ENA  107 (354)
Q Consensus        41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~~~~v~~~-~~~~d~----------~~a  107 (354)
                      +.+++.|+||++.+|..++..|+..|.  .|++.|+++  ++....++.....  .+..+ .+-++.          .+.
T Consensus         5 ~gK~alITGas~GIG~aia~~la~~G~--~V~i~~r~~~~l~~~~~~~~~~~~--~~~~~~~D~s~~~~~~~~~~~~~~~   80 (258)
T d1ae1a_           5 KGTTALVTGGSKGIGYAIVEELAGLGA--RVYTCSRNEKELDECLEIWREKGL--NVEGSVCDLLSRTERDKLMQTVAHV   80 (258)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHTTC--CEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHhcCC--CceEEEeecCCHHHHHHHHHHHHHH
Confidence            345899999999999999999999998  999999986  2333334443322  12221 111221          122


Q ss_pred             h-CCCcEEEEcCCCCCCCC---CCHH---HHHHHH----HHHHHHHHHHHhhhCCCeEEEEecCCCCCchHHHHHHHHHh
Q 018512          108 L-TGMDLVIIPAGVPRKPG---MTRD---DLFNIN----AGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKA  176 (354)
Q Consensus       108 l-~~aDvVIi~ag~~~~~g---~~r~---d~~~~n----~~~~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~~~~~~~  176 (354)
                      + ..-|++|..||......   .+..   ..+.-|    +...+.+.+.+.+. +.+.++++|-.....           
T Consensus        81 ~~g~idilinnag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~-~~g~ii~isS~~~~~-----------  148 (258)
T d1ae1a_          81 FDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKAS-QNGNVIFLSSIAGFS-----------  148 (258)
T ss_dssp             TTSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TSEEEEEECCGGGTS-----------
T ss_pred             hCCCcEEEeccccccccCccccCCHHHHhhhhhhccccccccccccccccccc-ccccccccccccccc-----------
Confidence            3 23789999888654321   2222   223334    34455556666655 455566555333211           


Q ss_pred             CCCCCCCEEEeccchHHHHHHHHHHHhCCCCCCCcceE
Q 018512          177 GTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPV  214 (354)
Q Consensus       177 ~~~p~~kviG~t~ld~~r~~~~la~~l~v~~~~v~~~v  214 (354)
                       +.|..-.++.+.-.-..|.+.+|+.++  +..|++-.
T Consensus       149 -~~~~~~~Y~~sK~al~~lt~~lA~el~--~~gIrvN~  183 (258)
T d1ae1a_         149 -ALPSVSLYSASKGAINQMTKSLACEWA--KDNIRVNS  183 (258)
T ss_dssp             -CCTTCHHHHHHHHHHHHHHHHHHHHHG--GGTEEEEE
T ss_pred             -ccccchhHHHHHHHHHHHHHHHHHhcC--cCcEEEEE
Confidence             222222233332233456778888875  44454333

>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamyl tRNA-reductase middle domain
species: Archaeon Methanopyrus kandleri [TaxId: 2320]

Probab=96.56  E-value=0.0022  Score=52.21  Aligned_cols=105  Identities=18%  Similarity=0.217  Sum_probs=64.9

Q ss_pred             CCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchh--HHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEc
Q 018512           40 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPG--VTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIP  117 (354)
Q Consensus        40 ~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g--~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~  117 (354)
                      .+..||+|||+ |.+|..++..|...+. .++.++.+...++  ....+.     ....   .-.++.+++.++|+||.+
T Consensus        22 l~~~~ilviGa-G~~g~~v~~~L~~~g~-~~i~v~nRt~~ka~~l~~~~~-----~~~~---~~~~~~~~l~~~Divi~a   91 (159)
T d1gpja2          22 LHDKTVLVVGA-GEMGKTVAKSLVDRGV-RAVLVANRTYERAVELARDLG-----GEAV---RFDELVDHLARSDVVVSA   91 (159)
T ss_dssp             CTTCEEEEESC-CHHHHHHHHHHHHHCC-SEEEEECSSHHHHHHHHHHHT-----CEEC---CGGGHHHHHHTCSEEEEC
T ss_pred             cccCeEEEECC-CHHHHHHHHHHHhcCC-cEEEEEcCcHHHHHHHHHhhh-----cccc---cchhHHHHhccCCEEEEe
Confidence            34569999999 9999999999988775 3789999864222  222221     1111   124678899999999998


Q ss_pred             CCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhC--CCeEEEEecCCCCCch
Q 018512          118 AGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC--PNATVNLISNPVNSTV  166 (354)
Q Consensus       118 ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~--p~a~viv~tNPv~~~~  166 (354)
                      .+.+..- .+.        +.++   ..+++-.  ..-+++=.+.|-|+-.
T Consensus        92 tss~~~i-i~~--------~~i~---~~~~~r~~~~~~~iiDlavPr~vd~  130 (159)
T d1gpja2          92 TAAPHPV-IHV--------DDVR---EALRKRDRRSPILIIDIANPRDVEE  130 (159)
T ss_dssp             CSSSSCC-BCH--------HHHH---HHHHHCSSCCCEEEEECCSSCSBCT
T ss_pred             cCCCCcc-ccH--------hhhH---HHHHhcccCCCeEEEeecCCCCcCh
Confidence            7655311 111        1111   2222222  2346676799977763

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

Probab=96.54  E-value=0.0063  Score=53.11  Aligned_cols=79  Identities=15%  Similarity=0.102  Sum_probs=51.7

Q ss_pred             CCCeEEEEcCCC--chHHHHHHHHHhCCCCcEEEEEecCC-chhHHHHHhcCCCCCeEEEEeCCC---------cHHhhh
Q 018512           41 AGFKVAILGAAG--GIGQPLAMLMKINPLVSVLHLYDVVN-TPGVTADISHMDTGAVVRGFLGQP---------QLENAL  108 (354)
Q Consensus        41 ~~~kI~IiGa~G--~vG~~~a~~l~~~~~~~ei~L~D~~~-~~g~~~dl~~~~~~~~v~~~~~~~---------d~~~al  108 (354)
                      +.+++.|+||+|  .+|.++|..|+..|.  +|++.|+++ +...+.++........+.....+.         +..+.+
T Consensus         4 ~gK~alITGaag~~GIG~AiA~~la~~Ga--~V~i~~r~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~   81 (274)
T d2pd4a1           4 KGKKGLIVGVANNKSIAYGIAQSCFNQGA--TLAFTYLNESLEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKDL   81 (274)
T ss_dssp             TTCEEEEECCCSTTSHHHHHHHHHHTTTC--EEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             CCCEEEEECCCCCcHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHhhCCceeEeeecccchhhHHHHHHHHHHHc
Confidence            346899999877  599999999999998  999999987 333444444322111121111111         123445


Q ss_pred             CCCcEEEEcCCCC
Q 018512          109 TGMDLVIIPAGVP  121 (354)
Q Consensus       109 ~~aDvVIi~ag~~  121 (354)
                      ...|++|..+|..
T Consensus        82 g~id~lV~nag~~   94 (274)
T d2pd4a1          82 GSLDFIVHSVAFA   94 (274)
T ss_dssp             SCEEEEEECCCCC
T ss_pred             CCCCeEEeecccc
Confidence            7899999988864

>d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Transcription corepressor CtbP
species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]

Probab=96.43  E-value=0.0077  Score=50.44  Aligned_cols=95  Identities=20%  Similarity=0.270  Sum_probs=61.5

Q ss_pred             CCCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcC
Q 018512           39 GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA  118 (354)
Q Consensus        39 ~~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~a  118 (354)
                      .-..++|.|||. |.+|+.++..+..-|.  +|..+|............       +..   ..++++.++.||+|++..
T Consensus        46 eL~gktvgIiG~-G~IG~~va~~l~~fg~--~v~~~d~~~~~~~~~~~~-------~~~---~~~l~~ll~~sD~i~~~~  112 (193)
T d1mx3a1          46 RIRGETLGIIGL-GRVGQAVALRAKAFGF--NVLFYDPYLSDGVERALG-------LQR---VSTLQDLLFHSDCVTLHC  112 (193)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHTTTC--EEEEECTTSCTTHHHHHT-------CEE---CSSHHHHHHHCSEEEECC
T ss_pred             eeeCceEEEecc-ccccccceeeeecccc--ceeeccCcccccchhhhc-------ccc---ccchhhccccCCEEEEee
Confidence            345579999999 9999999999986666  999999865322211111       111   246788899999999975


Q ss_pred             CC-CCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecC
Q 018512          119 GV-PRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISN  160 (354)
Q Consensus       119 g~-~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tN  160 (354)
                      .. +...++-       |.+       .+....|++++||++=
T Consensus       113 plt~~T~~li-------~~~-------~l~~mk~~a~lIN~sR  141 (193)
T d1mx3a1         113 GLNEHNHHLI-------NDF-------TVKQMRQGAFLVNTAR  141 (193)
T ss_dssp             CCCTTCTTSB-------SHH-------HHTTSCTTEEEEECSC
T ss_pred             cccccchhhh-------hHH-------HHhccCCCCeEEecCC
Confidence            32 2222221       111       1233457899999973

>d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Formate dehydrogenase
species: Pseudomonas sp., strain 101 [TaxId: 306]

Probab=96.41  E-value=0.01  Score=49.24  Aligned_cols=95  Identities=17%  Similarity=0.170  Sum_probs=61.3

Q ss_pred             CCCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc-hhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEc
Q 018512           39 GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT-PGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIP  117 (354)
Q Consensus        39 ~~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~-~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~  117 (354)
                      .-..++|.|+|. |.+|..++..+..-+.  +|..+|.... .....+..       +..   ..++++.+++||+|++.
T Consensus        41 ~l~~~~vgiiG~-G~IG~~va~~l~~fg~--~v~~~d~~~~~~~~~~~~~-------~~~---~~~l~~~l~~sD~v~~~  107 (188)
T d2naca1          41 DLEAMHVGTVAA-GRIGLAVLRRLAPFDV--HLHYTDRHRLPESVEKELN-------LTW---HATREDMYPVCDVVTLN  107 (188)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHGGGTC--EEEEECSSCCCHHHHHHHT-------CEE---CSSHHHHGGGCSEEEEC
T ss_pred             eccccceeeccc-cccchhhhhhhhccCc--eEEEEeecccccccccccc-------ccc---cCCHHHHHHhccchhhc
Confidence            345679999999 9999999999976666  8999998652 22222111       111   24678899999999997


Q ss_pred             CCCC-CCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecC
Q 018512          118 AGVP-RKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISN  160 (354)
Q Consensus       118 ag~~-~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tN  160 (354)
                      .... ...++-..              +.+....+++++||++-
T Consensus       108 ~plt~~T~~li~~--------------~~l~~mk~ga~lIN~aR  137 (188)
T d2naca1         108 CPLHPETEHMIND--------------ETLKLFKRGAYIVNTAR  137 (188)
T ss_dssp             SCCCTTTTTCBSH--------------HHHTTSCTTEEEEECSC
T ss_pred             ccccccchhhhHH--------------HHHHhCCCCCEEEecCc
Confidence            5322 11222111              12233347889999973

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=96.40  E-value=0.0096  Score=51.76  Aligned_cols=113  Identities=14%  Similarity=0.192  Sum_probs=68.0

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCCCCeEEE-EeCCCc-------HHhhhCCC
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRG-FLGQPQ-------LENALTGM  111 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~~~~v~~-~~~~~d-------~~~al~~a  111 (354)
                      .+.+.|+||++.+|..++..|+..|.  .|++.|+++  .+....++.....  .+.. +....+       ..+.+-.-
T Consensus         6 gK~alITGas~GIG~aia~~la~~Ga--~V~~~~~~~~~~~~~~~~~~~~~~--~~~~Dv~~~~~~~~~~~~~~~~~g~i   81 (253)
T d1hxha_           6 GKVALVTGGASGVGLEVVKLLLGEGA--KVAFSDINEAAGQQLAAELGERSM--FVRHDVSSEADWTLVMAAVQRRLGTL   81 (253)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHHTTC--EEEEECSCHHHHHHHHHHHCTTEE--EECCCTTCHHHHHHHHHHHHHHHCSC
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHhCCCeE--EEEeecCCHHHHHHHHHHHHHHhCCC
Confidence            35788889999999999999999998  899999976  2333344432110  0000 000011       12345688


Q ss_pred             cEEEEcCCCCCCC---CCCH---HHHHHHH----HHHHHHHHHHHhhhCCCeEEEEecC
Q 018512          112 DLVIIPAGVPRKP---GMTR---DDLFNIN----AGIVRTLCEGIAKCCPNATVNLISN  160 (354)
Q Consensus       112 DvVIi~ag~~~~~---g~~r---~d~~~~n----~~~~~~i~~~i~~~~p~a~viv~tN  160 (354)
                      |++|..||.....   ..+.   ...+.-|    ....+...+.|++.  .+.||+++.
T Consensus        82 DilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~--~G~Iv~isS  138 (253)
T d1hxha_          82 NVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKET--GGSIINMAS  138 (253)
T ss_dssp             CEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTT--CEEEEEECC
T ss_pred             CeEEecccccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhc--CCceecccc
Confidence            9999999865322   1222   2233445    34566666666542  477777764

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.35  E-value=0.044  Score=47.27  Aligned_cols=150  Identities=17%  Similarity=0.124  Sum_probs=86.4

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCCCCeEEEE-eCCCc----------HHhhh
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGF-LGQPQ----------LENAL  108 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~~~~v~~~-~~~~d----------~~~al  108 (354)
                      .+.+.|+||++.+|.+++..|+..|.  +|++.|+++  ++....++...      ..+ .+-+|          ..+.+
T Consensus         6 GK~alITGas~GIG~aia~~la~~Ga--~V~i~~r~~~~~~~~~~~~~~~------~~~~~Dvs~~~~v~~~~~~~~~~~   77 (250)
T d1ydea1           6 GKVVVVTGGGRGIGAGIVRAFVNSGA--RVVICDKDESGGRALEQELPGA------VFILCDVTQEDDVKTLVSETIRRF   77 (250)
T ss_dssp             TCEEEEETCSSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHCTTE------EEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHhcCCC------eEEEccCCCHHHHHHHHHHHHHhc
Confidence            45799999999999999999999998  899999976  22222222221      111 11112          12344


Q ss_pred             CCCcEEEEcCCCCCCCC----CCHH---HHHHHH----HHHHHHHHHHHhhhCCCeEEEEecCCCCCchHHHHHHHHHhC
Q 018512          109 TGMDLVIIPAGVPRKPG----MTRD---DLFNIN----AGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAG  177 (354)
Q Consensus       109 ~~aDvVIi~ag~~~~~g----~~r~---d~~~~n----~~~~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~~~~~~~~  177 (354)
                      -..|++|..||.....+    .+..   ..+.-|    ....+...+.|++.  .+.||++|....          ..  
T Consensus        78 g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~--~G~Ii~isS~~~----------~~--  143 (250)
T d1ydea1          78 GRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKS--QGNVINISSLVG----------AI--  143 (250)
T ss_dssp             SCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEEEECCHHH----------HH--
T ss_pred             CCCCEEEecccccccccccccccHHHHHHHHHHhhhhHHHHHHHhhHHHHhC--CCCCcccccccc----------cc--
Confidence            67899999998543222    2222   233444    45566667777654  366777653211          11  


Q ss_pred             CCCCCCEEEeccchHHHHHHHHHHHhCCCCCCCcceEE
Q 018512          178 TYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVV  215 (354)
Q Consensus       178 ~~p~~kviG~t~ld~~r~~~~la~~l~v~~~~v~~~v~  215 (354)
                      +.|..-.++.+.-.-..|.+.+|..++  +..|++-.+
T Consensus       144 ~~~~~~~Y~asKaal~~lt~~lA~e~a--~~gIrVN~I  179 (250)
T d1ydea1         144 GQAQAVPYVATKGAVTAMTKALALDES--PYGVRVNCI  179 (250)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHHHHHHHG--GGTCEEEEE
T ss_pred             cccCcchhHHHHhhHHHHHHHHHHHhc--ccCeEEEEE
Confidence            233222333443334557788888774  555654444

>d2hjsa1 c.2.1.3 (A:3-129,A:320-336) Usg-1 protein homolog PA3116 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Usg-1 protein homolog PA3116
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=96.34  E-value=0.00085  Score=53.85  Aligned_cols=71  Identities=21%  Similarity=0.316  Sum_probs=45.7

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCC-CCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcCC
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINP-LVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG  119 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~-~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~ag  119 (354)
                      +|||+|+||+|.+|.-+...|.+.+ ...+|.++-.....|...  ..  ....+....  .+ .+.+.++|+++++++
T Consensus         2 ~mnVaIvGATGyvG~eli~lL~~~~hP~~~l~~~~s~~~~Gk~i--~~--~~~~~~~~~--~~-~~~~~~~d~vf~a~p   73 (144)
T d2hjsa1           2 PLNVAVVGATGSVGEALVGLLDERDFPLHRLHLLASAESAGQRM--GF--AESSLRVGD--VD-SFDFSSVGLAFFAAA   73 (144)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECTTTTTCEE--EE--TTEEEECEE--GG-GCCGGGCSEEEECSC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhcCCCceEEEEEeecccCCcce--ee--ccccchhcc--ch-hhhhccceEEEecCC
Confidence            6899999999999999999997654 345888876654222211  11  112232221  12 355789999999853

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

Probab=96.34  E-value=0.039  Score=48.44  Aligned_cols=156  Identities=13%  Similarity=0.045  Sum_probs=84.2

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCCCCeEEEE-eCCCcH----------HhhhC
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGF-LGQPQL----------ENALT  109 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~~~~v~~~-~~~~d~----------~~al~  109 (354)
                      +.+.|+||+|.+|.++|..|+..|.  +|++.|++.  ....+.++.... ...+..+ .+-.+.          .+.+.
T Consensus        26 K~alITGas~GIG~aiA~~la~~Ga--~Vii~~r~~~~l~~~~~~l~~~~-g~~~~~~~~D~~~~~~v~~~~~~~~~~~g  102 (294)
T d1w6ua_          26 KVAFITGGGTGLGKGMTTLLSSLGA--QCVIASRKMDVLKATAEQISSQT-GNKVHAIQCDVRDPDMVQNTVSELIKVAG  102 (294)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHHH-SSCEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHcCC--EEEEEECCHHHHHHHHHHHHHhc-CCceEEEEecccChHHHHHHhhhhhhhcc
Confidence            5789999999999999999999997  999999986  233344443221 1111111 111221          23346


Q ss_pred             CCcEEEEcCCCCCCCC---CC---HHHHHHHHHH----HHHHHHHHHhhhCCCeEEEEecCCCCCchHHHHHHHHHhCCC
Q 018512          110 GMDLVIIPAGVPRKPG---MT---RDDLFNINAG----IVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTY  179 (354)
Q Consensus       110 ~aDvVIi~ag~~~~~g---~~---r~d~~~~n~~----~~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~~~~~~~~~~  179 (354)
                      ..|++|..+|......   .+   ..+.+..|..    .....+..+......+.+++.+.....          .  +.
T Consensus       103 ~iDilvnnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~i~~~ss~~~~----------~--~~  170 (294)
T d1w6ua_         103 HPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAE----------T--GS  170 (294)
T ss_dssp             SCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHH----------H--CC
T ss_pred             ccchhhhhhhhccccccccchhhhhhhheeeecccchhhhhhhhcccccccccccccccccchhh----------h--cc
Confidence            8999999988654322   11   1222333322    234445555544555655555432110          1  12


Q ss_pred             CCCCEEEeccchHHHHHHHHHHHhCCCCCCCcceEE
Q 018512          180 DPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVV  215 (354)
Q Consensus       180 p~~kviG~t~ld~~r~~~~la~~l~v~~~~v~~~v~  215 (354)
                      |..-.++.+.-.-..+.+.+|..++  +..|++-.+
T Consensus       171 ~~~~~YsasKaal~~ltk~lA~ela--~~gIrVN~I  204 (294)
T d1w6ua_         171 GFVVPSASAKAGVEAMSKSLAAEWG--KYGMRFNVI  204 (294)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHHG--GGTEEEEEE
T ss_pred             cccchHHHHHHHHHHHHHHHHHHHh--HhCeEEEEE
Confidence            2111233333333456778888775  455544433

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

Probab=96.34  E-value=0.014  Score=50.31  Aligned_cols=159  Identities=14%  Similarity=0.188  Sum_probs=87.1

Q ss_pred             CCCeEEEEcCCC--chHHHHHHHHHhCCCCcEEEEEecCC-chhHHHHHhcCCCCCeEEEEeCCCc----------HHhh
Q 018512           41 AGFKVAILGAAG--GIGQPLAMLMKINPLVSVLHLYDVVN-TPGVTADISHMDTGAVVRGFLGQPQ----------LENA  107 (354)
Q Consensus        41 ~~~kI~IiGa~G--~vG~~~a~~l~~~~~~~ei~L~D~~~-~~g~~~dl~~~~~~~~v~~~~~~~d----------~~~a  107 (354)
                      +.+++.|+||+|  -+|.++|..|+..|.  +|++.|+++ ....+.++............ ...+          ..+.
T Consensus         4 ~gK~~lITGass~~GIG~aiA~~l~~~G~--~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~   80 (258)
T d1qsga_           4 SGKRILVTGVASKLSIAYGIAQAMHREGA--ELAFTYQNDKLKGRVEEFAAQLGSDIVLQC-DVAEDASIDTMFAELGKV   80 (258)
T ss_dssp             TTCEEEECCCCSTTSHHHHHHHHHHHTTC--EEEEEESSTTTHHHHHHHHHHTTCCCEEEC-CTTCHHHHHHHHHHHHTT
T ss_pred             CCCEEEEECCCCchhHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHHHhhcCCcceeec-ccchHHHHHHHHHHhhhc
Confidence            346899999966  588999999999998  899999986 33333333322111111111 1111          1233


Q ss_pred             hCCCcEEEEcCCCCCCCCC--------CH---HHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecCCCCCchHHHHHHHHH
Q 018512          108 LTGMDLVIIPAGVPRKPGM--------TR---DDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNSTVPIAAEVFKK  175 (354)
Q Consensus       108 l~~aDvVIi~ag~~~~~g~--------~r---~d~~~~n~~~~~~i~~~i~~~~-p~a~viv~tNPv~~~~~~~~~~~~~  175 (354)
                      +...|++|..++.......        ..   .....-|......+.+.+..+- +...++++|......          
T Consensus        81 ~~~~d~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ii~iss~~~~~----------  150 (258)
T d1qsga_          81 WPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAER----------  150 (258)
T ss_dssp             CSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTS----------
T ss_pred             ccccceEEEeecccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhccCCcEEEEecchhhcc----------
Confidence            4567899988765422111        11   1123445556666666666554 344555555422111          


Q ss_pred             hCCCCCCCEEEeccchHHHHHHHHHHHhCCCCCCCcceEEe
Q 018512          176 AGTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVVG  216 (354)
Q Consensus       176 ~~~~p~~kviG~t~ld~~r~~~~la~~l~v~~~~v~~~v~G  216 (354)
                        +.|..-.++.+.-.-..+.+.+|..++  ++.|++-.+-
T Consensus       151 --~~~~~~~Y~~sKaal~~ltr~lA~el~--~~gIrVN~I~  187 (258)
T d1qsga_         151 --AIPNYNVMGLAKASLEANVRYMANAMG--PEGVRVNAIS  187 (258)
T ss_dssp             --BCTTTTHHHHHHHHHHHHHHHHHHHHT--TTTEEEEEEE
T ss_pred             --CCCCcHHHHHHHHHHHHHHHHHHHHhC--ccCceeeccc
Confidence              223222344433334567888999886  5667655553

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

Probab=96.33  E-value=0.0049  Score=53.40  Aligned_cols=152  Identities=16%  Similarity=0.223  Sum_probs=86.7

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCCCCeEEEE-eCCCc---H-------Hhhh
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGF-LGQPQ---L-------ENAL  108 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~~~~v~~~-~~~~d---~-------~~al  108 (354)
                      .+.+.|+||++.+|.+++..|+..|.  .|++.|+++  ++....++...     ...+ .+-++   .       .+.+
T Consensus         4 gK~alITGas~GIG~a~a~~l~~~G~--~Vv~~~r~~~~l~~~~~~~~~~-----~~~~~~Dv~~~~~v~~~~~~~~~~~   76 (243)
T d1q7ba_           4 GKIALVTGASRGIGRAIAETLAARGA--KVIGTATSENGAQAISDYLGAN-----GKGLMLNVTDPASIESVLEKIRAEF   76 (243)
T ss_dssp             TCEEEESSCSSHHHHHHHHHHHHTTC--EEEEEESSHHHHHHHHHHHGGG-----EEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHHhCCC-----CcEEEEEecCHHHhhhhhhhhhccc
Confidence            34678889999999999999999998  899999976  23333333211     1111 01111   1       2334


Q ss_pred             CCCcEEEEcCCCCCCCC---CCH---HHHHHHH----HHHHHHHHHHHhhhCCCeEEEEecCCCCCchHHHHHHHHHhCC
Q 018512          109 TGMDLVIIPAGVPRKPG---MTR---DDLFNIN----AGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGT  178 (354)
Q Consensus       109 ~~aDvVIi~ag~~~~~g---~~r---~d~~~~n----~~~~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~~~~~~~~~  178 (354)
                      ...|++|..||......   .+.   ...+.-|    ....+.+.+.|++.. .+.||++|...          -..  +
T Consensus        77 g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~G~II~isS~~----------~~~--~  143 (243)
T d1q7ba_          77 GEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKR-HGRIITIGSVV----------GTM--G  143 (243)
T ss_dssp             CSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHH----------HHH--C
T ss_pred             CCcceehhhhhhccccccccccccccccccceeechhhhhHHHHHHHHHHcC-CCEeeeecchh----------hcC--C
Confidence            58999999998654322   222   2233444    455666666666553 57777776311          011  2


Q ss_pred             CCCCCEEEeccchHHHHHHHHHHHhCCCCCCCcceEE
Q 018512          179 YDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVV  215 (354)
Q Consensus       179 ~p~~kviG~t~ld~~r~~~~la~~l~v~~~~v~~~v~  215 (354)
                      .|..=.++.+.-.-..|.+.+|..++  +..|++-.+
T Consensus       144 ~~~~~~Y~asKaal~~lt~~lA~ela--~~gIrVN~I  178 (243)
T d1q7ba_         144 NGGQANYAAAKAGLIGFSKSLAREVA--SRGITVNVV  178 (243)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHHG--GGTEEEEEE
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHhC--ccCeEEEEE
Confidence            33222333343344567778888774  445544433

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=96.31  E-value=0.05  Score=47.29  Aligned_cols=158  Identities=16%  Similarity=0.107  Sum_probs=87.5

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC---chhHHHHHhcCCCCCeEEEE-eCCCc----------HHhh
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN---TPGVTADISHMDTGAVVRGF-LGQPQ----------LENA  107 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~---~~g~~~dl~~~~~~~~v~~~-~~~~d----------~~~a  107 (354)
                      .+++.|+||++.+|..++..|+..|.  +|++.|++.   ++..+.++....  ..+..+ .+-.+          ..+.
T Consensus        18 gK~~lITGas~GIG~aia~~la~~Ga--~Vvi~~~~~~~~~~~~~~~~~~~g--~~~~~~~~D~~~~~~v~~~~~~~~~~   93 (272)
T d1g0oa_          18 GKVALVTGAGRGIGREMAMELGRRGC--KVIVNYANSTESAEEVVAAIKKNG--SDAACVKANVGVVEDIVRMFEEAVKI   93 (272)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHHTTC--EEEEEESSCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHcCC--EEEEEeCCchHHHHHHHHHHHhhC--CceeeEeCCCCCHHHHHHHHHHHHHH
Confidence            35899999999999999999999998  899999876   222333343332  122221 11122          1344


Q ss_pred             hCCCcEEEEcCCCCCCCC---CC---HHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecCCCCCchHHHHHHHHHhCCCC
Q 018512          108 LTGMDLVIIPAGVPRKPG---MT---RDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNSTVPIAAEVFKKAGTYD  180 (354)
Q Consensus       108 l~~aDvVIi~ag~~~~~g---~~---r~d~~~~n~~~~~~i~~~i~~~~-p~a~viv~tNPv~~~~~~~~~~~~~~~~~p  180 (354)
                      +-.-|++|..+|......   .+   ..+.+..|+.....+.+.+..+- ..+.+++++.-....           ...+
T Consensus        94 ~g~idilV~nag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~g~~i~i~s~~~~~-----------~~~~  162 (272)
T d1g0oa_          94 FGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSITGQA-----------KAVP  162 (272)
T ss_dssp             HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCGGGTC-----------SSCS
T ss_pred             hCCCCccccccccchhhhhhhhhhhHHHHHhhhccceeeeecccccccccccccccccccccccc-----------cccc
Confidence            568899999988653321   22   23345556665555555555544 345555554321111           0111


Q ss_pred             CCCEEEeccchHHHHHHHHHHHhCCCCCCCc--ceEEe
Q 018512          181 PKKLLGVTMLDVVRANTFVAEVLGLDPRDVD--VPVVG  216 (354)
Q Consensus       181 ~~kviG~t~ld~~r~~~~la~~l~v~~~~v~--~~v~G  216 (354)
                      ..=.++.+.-.-..+.+.+|..++  +..|+  +..-|
T Consensus       163 ~~~~Y~asKaal~~ltk~lA~e~~--~~gIrVN~I~PG  198 (272)
T d1g0oa_         163 KHAVYSGSKGAIETFARCMAIDMA--DKKITVNVVAPG  198 (272)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHHHG--GGTCEEEEEEEC
T ss_pred             chhhHHHHHHHHHHHHHHHHHHhc--hhCeEEEEEccC
Confidence            111233332233456788888875  45554  44444

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

Probab=96.30  E-value=0.022  Score=49.45  Aligned_cols=152  Identities=18%  Similarity=0.165  Sum_probs=84.9

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCCCCeEEEEe-CCCc---H-------Hhhh
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQ---L-------ENAL  108 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~~~~v~~~~-~~~d---~-------~~al  108 (354)
                      .+.+.|+||++-+|..++..|+..|.  .|++.|+++  ......++..     .+..+. +-++   .       .+.+
T Consensus         5 gK~alVTGas~GIG~aia~~la~~Ga--~V~~~~r~~~~~~~~~~~~~~-----~~~~~~~Dv~~~~~v~~~~~~~~~~~   77 (254)
T d1hdca_           5 GKTVIITGGARGLGAEAARQAVAAGA--RVVLADVLDEEGAATARELGD-----AARYQHLDVTIEEDWQRVVAYAREEF   77 (254)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHTTGG-----GEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCcCCHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHhCC-----ceEEEEcccCCHHHHHHHHHHHHHHc
Confidence            45899999999999999999999998  899999976  2222222221     111111 1111   1       2334


Q ss_pred             CCCcEEEEcCCCCCCCC---CC---HHHHHHHHH----HHHHHHHHHHhhhCCCeEEEEecCCCCCchHHHHHHHHHhCC
Q 018512          109 TGMDLVIIPAGVPRKPG---MT---RDDLFNINA----GIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGT  178 (354)
Q Consensus       109 ~~aDvVIi~ag~~~~~g---~~---r~d~~~~n~----~~~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~~~~~~~~~  178 (354)
                      ...|++|..||......   .+   ....+..|+    ...+.+++.+++. ..+.||++|.-....            +
T Consensus        78 g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~-~~G~II~isS~~~~~------------~  144 (254)
T d1hdca_          78 GSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDA-GGGSIVNISSAAGLM------------G  144 (254)
T ss_dssp             SCCCEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCGGGTS------------C
T ss_pred             CCccEEEecCccccccccccccccccchhhhHHhhHHHHHHHHHHHHHhhc-CCCeecccccchhcc------------c
Confidence            68999999998653221   22   223344454    4555666666654 356777776322111            2


Q ss_pred             CCCCCEEEeccchHHHHHHHHHHHhCCCCCCCcceEE
Q 018512          179 YDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVV  215 (354)
Q Consensus       179 ~p~~kviG~t~ld~~r~~~~la~~l~v~~~~v~~~v~  215 (354)
                      .|..-.++.+.-.-..|.+.+|..++  +..|++-.+
T Consensus       145 ~~~~~~Y~asKaal~~lt~~lA~e~a--~~gIrVN~I  179 (254)
T d1hdca_         145 LALTSSYGASKWGVRGLSKLAAVELG--TDRIRVNSV  179 (254)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHHG--GGTEEEEEE
T ss_pred             ccchhhHHHHHHHHHHHHHHHHHHhC--CCceEEEEe
Confidence            22222233333233456777777764  444544333

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=96.29  E-value=0.017  Score=50.25  Aligned_cols=156  Identities=13%  Similarity=0.124  Sum_probs=84.2

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCC-CCeEEEEeC-CCc---H-------Hhhh
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDT-GAVVRGFLG-QPQ---L-------ENAL  108 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~-~~~v~~~~~-~~d---~-------~~al  108 (354)
                      +.+.|+||++.+|..++..|+..|.  +|++.|+++  ++....++..... ...+..+.. -++   .       .+.+
T Consensus         6 KvalVTGas~GIG~aia~~la~~Ga--~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~   83 (264)
T d1spxa_           6 KVAIITGSSNGIGRATAVLFAREGA--KVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGKF   83 (264)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CEEEEeCcCCHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHhcCCCcCceEEEEccCCCHHHHHHHHHHHHHHh
Confidence            4567789999999999999999998  899999986  3344455554322 122333211 112   1       2234


Q ss_pred             CCCcEEEEcCCCCCCC-------CCCH---HHHHHHHH----HHHHHHHHHHhhhCCCeEEEEecCCCCCchHHHHHHHH
Q 018512          109 TGMDLVIIPAGVPRKP-------GMTR---DDLFNINA----GIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFK  174 (354)
Q Consensus       109 ~~aDvVIi~ag~~~~~-------g~~r---~d~~~~n~----~~~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~~~~~  174 (354)
                      -..|++|..||.....       .++.   ...+.-|+    ...+...+.+++. ..++|++.|--....         
T Consensus        84 g~iDilvnnAG~~~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~p~m~~~-~g~iI~~~S~~~~~~---------  153 (264)
T d1spxa_          84 GKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSST-KGEIVNISSIASGLH---------  153 (264)
T ss_dssp             SCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEECCTTSSSS---------
T ss_pred             CCCCEeecccccccCCccccccccCCHHHHHHHHHHhHHHHHHHHhhhCCccccc-cCcceeeeeeccccc---------
Confidence            5799999998864211       1122   22334454    4556666666544 345555544222111         


Q ss_pred             HhCCCCCCCEEEeccchHHHHHHHHHHHhCCCCCCCcceEE
Q 018512          175 KAGTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVV  215 (354)
Q Consensus       175 ~~~~~p~~kviG~t~ld~~r~~~~la~~l~v~~~~v~~~v~  215 (354)
                         +.|..-.++.+.-.-..|.+.+|..++  +..|++-.+
T Consensus       154 ---~~~~~~~Y~asKaal~~lt~~lA~el~--~~gIrVN~V  189 (264)
T d1spxa_         154 ---ATPDFPYYSIAKAAIDQYTRNTAIDLI--QHGIRVNSI  189 (264)
T ss_dssp             ---CCTTSHHHHHHHHHHHHHHHHHHHHHG--GGTCEEEEE
T ss_pred             ---cCCCchhhhhhhhhHHHHHHHHHHHhc--ccCeEEEEE
Confidence               122111233333233456777887774  555654444

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

Probab=96.28  E-value=0.0045  Score=53.62  Aligned_cols=152  Identities=19%  Similarity=0.143  Sum_probs=81.8

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc--hhHHHHHhcCCCCCeEEE-EeCCCcH-------HhhhCCC
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRG-FLGQPQL-------ENALTGM  111 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~--~g~~~dl~~~~~~~~v~~-~~~~~d~-------~~al~~a  111 (354)
                      .+++.|+||++.+|..++..|+..|.  +|++.|+++.  +....++.   . ..+.. +....+.       .+.+..-
T Consensus         5 gK~~lITGas~GIG~aia~~l~~~G~--~V~~~~r~~~~l~~~~~~~~---~-~~~~~Dv~~~~~v~~~~~~~~~~~g~i   78 (242)
T d1ulsa_           5 DKAVLITGAAHGIGRATLELFAKEGA--RLVACDIEEGPLREAAEAVG---A-HPVVMDVADPASVERGFAEALAHLGRL   78 (242)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHTTT---C-EEEECCTTCHHHHHHHHHHHHHHHSSC
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHcC---C-eEEEEecCCHHHHHHHHHHHHHhcCCc
Confidence            45789999999999999999999998  8999999762  11112111   1 00110 0000111       2334679


Q ss_pred             cEEEEcCCCCCCCC---CCH---HHHHHHHHHH----HHHHHHHHhhhCCCeEEEEecCCCCCchHHHHHHHHHhCCCCC
Q 018512          112 DLVIIPAGVPRKPG---MTR---DDLFNINAGI----VRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDP  181 (354)
Q Consensus       112 DvVIi~ag~~~~~g---~~r---~d~~~~n~~~----~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~~~~~~~~~~p~  181 (354)
                      |++|..||......   .+.   ...+.-|+..    .+...+.+++. ..+.+++.+. ...            .+.|.
T Consensus        79 DilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~-~~~~i~~~ss-~~~------------~~~~~  144 (242)
T d1ulsa_          79 DGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREK-NPGSIVLTAS-RVY------------LGNLG  144 (242)
T ss_dssp             CEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTT-CCEEEEEECC-GGG------------GCCTT
T ss_pred             eEEEECCcccccCchhhCcchhhhccccccchhhhhhhhhcccccccc-ccceeeeecc-ccc------------cCCCC
Confidence            99999998754321   222   2334455444    44455555443 3444554432 100            12333


Q ss_pred             CCEEEeccchHHHHHHHHHHHhCCCCCCCcceEE
Q 018512          182 KKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVV  215 (354)
Q Consensus       182 ~kviG~t~ld~~r~~~~la~~l~v~~~~v~~~v~  215 (354)
                      .-.++.+.-.-..|.+.+|..++  +..|++-.+
T Consensus       145 ~~~Y~asKaal~~ltk~lA~ela--~~gIrVN~I  176 (242)
T d1ulsa_         145 QANYAASMAGVVGLTRTLALELG--RWGIRVNTL  176 (242)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHG--GGTEEEEEE
T ss_pred             CcchHHHHHHHHHHHHHHHHHHh--hhCcEEEEE
Confidence            22333333333456777887774  445554444

>d1vkna1 c.2.1.3 (A:1-144,A:308-339) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC
species: Thermotoga maritima [TaxId: 2336]

Probab=96.27  E-value=0.0017  Score=53.90  Aligned_cols=73  Identities=18%  Similarity=0.231  Sum_probs=44.5

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhH-HHHHh-cCCCCCeEEEEeCCCcHHhhhCCCcEEEEcCC
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGV-TADIS-HMDTGAVVRGFLGQPQLENALTGMDLVIIPAG  119 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~-~~dl~-~~~~~~~v~~~~~~~d~~~al~~aDvVIi~ag  119 (354)
                      ++||+|+||+|.+|.-++..|...+.+ +|..+=-+...|. ..+.. +......+.    ..+.++..+++|+|+.+.+
T Consensus         1 MikVaIvGATGyvG~eLirlL~~HP~~-ei~~l~s~~~aG~~i~~~~p~~~~~~~~~----~~~~~~~~~~~dvvf~a~p   75 (176)
T d1vkna1           1 MIRAGIIGATGYTGLELVRLLKNHPEA-KITYLSSRTYAGKKLEEIFPSTLENSILS----EFDPEKVSKNCDVLFTALP   75 (176)
T ss_dssp             CEEEEEESTTSHHHHHHHHHHHHCTTE-EEEEEECSTTTTSBHHHHCGGGCCCCBCB----CCCHHHHHHHCSEEEECCS
T ss_pred             CeEEEEECCCcHHHHHHHHHHHhCCCc-eEEEeeccccCCCcccccCchhhcccccc----ccCHhHhccccceEEEccc
Confidence            579999999999999999999887755 5555533332222 12221 111111222    1344555678999999753

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=96.25  E-value=0.031  Score=48.48  Aligned_cols=156  Identities=13%  Similarity=0.094  Sum_probs=83.6

Q ss_pred             CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCCCCeEEEEe-CCCcH----------Hhh
Q 018512           41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQL----------ENA  107 (354)
Q Consensus        41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~~~~v~~~~-~~~d~----------~~a  107 (354)
                      +.+.+.|+||++.+|..+|..|+..|.  .|++.|+++  ++....++.....  .+..+. +-++.          .+.
T Consensus         7 kgK~alVTGas~GIG~aiA~~la~~Ga--~V~~~~r~~~~l~~~~~~~~~~~~--~~~~~~~Dv~~~~~v~~~~~~~~~~   82 (259)
T d1xq1a_           7 KAKTVLVTGGTKGIGHAIVEEFAGFGA--VIHTCARNEYELNECLSKWQKKGF--QVTGSVCDASLRPEREKLMQTVSSM   82 (259)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHTTC--CEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHhcCC--ceEEEeccCCCHHHHHHHHHHHHHH
Confidence            345899999999999999999999998  899999986  3333444443321  222211 11121          122


Q ss_pred             hCC-CcEEEEcCCCCCCC---CCCHH---HHHHHHH----HHHHHHHHHHhhhCCCeEEEEecCCCCCchHHHHHHHHHh
Q 018512          108 LTG-MDLVIIPAGVPRKP---GMTRD---DLFNINA----GIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKA  176 (354)
Q Consensus       108 l~~-aDvVIi~ag~~~~~---g~~r~---d~~~~n~----~~~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~~~~~~~  176 (354)
                      +.+ -|++|..||.....   ..+..   ..+.-|+    ...+...+.|++.. .+.|+++|.-....           
T Consensus        83 ~~g~idilvnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~-~G~Iv~isS~~~~~-----------  150 (259)
T d1xq1a_          83 FGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASG-CGNIIFMSSIAGVV-----------  150 (259)
T ss_dssp             HTTCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-SCEEEEEC-----------------
T ss_pred             hCCCcccccccccccCCCchhhCCHHHHHHHHHHHhhhheeeehhhhhcccccc-cccccccccccccc-----------
Confidence            333 79999999864321   22322   2334444    44556666666554 45566665322211           


Q ss_pred             CCCCCCCEEEeccchHHHHHHHHHHHhCCCCCCCcceEE
Q 018512          177 GTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVV  215 (354)
Q Consensus       177 ~~~p~~kviG~t~ld~~r~~~~la~~l~v~~~~v~~~v~  215 (354)
                       +.|..-.++.+.-.-..|.+.+|..++  +..|++-.+
T Consensus       151 -~~~~~~~Y~asKaal~~lt~~lA~e~~--~~gIrVN~V  186 (259)
T d1xq1a_         151 -SASVGSIYSATKGALNQLARNLACEWA--SDGIRANAV  186 (259)
T ss_dssp             -----CCHHHHHHHHHHHHHHHHHHHHG--GGTCEEEEE
T ss_pred             -cccccccccccccchhhhhHHHHHHhc--ccCeEEEEe
Confidence             122222333333334556778887764  445554444

>d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-glycerate dehydrogenase
species: Hyphomicrobium methylovorum [TaxId: 84]

Probab=96.21  E-value=0.013  Score=48.95  Aligned_cols=94  Identities=17%  Similarity=0.130  Sum_probs=60.0

Q ss_pred             CCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcCC
Q 018512           40 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG  119 (354)
Q Consensus        40 ~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~ag  119 (354)
                      ....+|.|||. |.+|+.++..+..-+.  ++..+|............ ..    .    ...++++.++.||+|++...
T Consensus        45 l~g~tvgIiG~-G~IG~~va~~l~~fg~--~v~~~d~~~~~~~~~~~~-~~----~----~~~~l~~ll~~sD~v~l~~p  112 (191)
T d1gdha1          45 LDNKTLGIYGF-GSIGQALAKRAQGFDM--DIDYFDTHRASSSDEASY-QA----T----FHDSLDSLLSVSQFFSLNAP  112 (191)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHTTTC--EEEEECSSCCCHHHHHHH-TC----E----ECSSHHHHHHHCSEEEECCC
T ss_pred             ecccceEEeec-ccchHHHHHHHHhhcc--ccccccccccccchhhcc-cc----c----ccCCHHHHHhhCCeEEecCC
Confidence            34579999999 9999999998886666  899999865221111111 11    1    12467889999999999743


Q ss_pred             C-CCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 018512          120 V-PRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  159 (354)
Q Consensus       120 ~-~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~t  159 (354)
                      . +...++-..              +.+....|++++||++
T Consensus       113 lt~~T~~li~~--------------~~l~~mk~~a~lIN~s  139 (191)
T d1gdha1         113 STPETRYFFNK--------------ATIKSLPQGAIVVNTA  139 (191)
T ss_dssp             CCTTTTTCBSH--------------HHHTTSCTTEEEEECS
T ss_pred             CCchHhheecH--------------HHhhCcCCccEEEecC
Confidence            2 222222111              1222344789999997

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

Probab=96.18  E-value=0.024  Score=48.64  Aligned_cols=155  Identities=15%  Similarity=0.168  Sum_probs=87.4

Q ss_pred             e-EEEEcCCCchHHHHHHHHHhCCC-----CcEEEEEecCC--chhHHHHHhcCCCCCeEEEEe-CCCcH----------
Q 018512           44 K-VAILGAAGGIGQPLAMLMKINPL-----VSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQL----------  104 (354)
Q Consensus        44 k-I~IiGa~G~vG~~~a~~l~~~~~-----~~ei~L~D~~~--~~g~~~dl~~~~~~~~v~~~~-~~~d~----------  104 (354)
                      + |.|+||++-+|..++..|+..|.     ...|+++|++.  ++....++....  .....+. +-+|.          
T Consensus         2 ~VvlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~~~l~~~~~~~~~~g--~~~~~~~~Dvt~~~~v~~~~~~~   79 (240)
T d2bd0a1           2 HILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEG--ALTDTITADISDMADVRRLTTHI   79 (240)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTT--CEEEEEECCTTSHHHHHHHHHHH
T ss_pred             CEEEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCHHHHHHHHHHHHhcC--CcEEEEEecCCCHHHHHHHHHHH
Confidence            5 56889999999999999998875     13489999876  333445555432  2222221 11221          


Q ss_pred             HhhhCCCcEEEEcCCCCCCCC---CCH---HHHHHHH----HHHHHHHHHHHhhhCCCeEEEEecCCCCCchHHHHHHHH
Q 018512          105 ENALTGMDLVIIPAGVPRKPG---MTR---DDLFNIN----AGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFK  174 (354)
Q Consensus       105 ~~al~~aDvVIi~ag~~~~~g---~~r---~d~~~~n----~~~~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~~~~~  174 (354)
                      .+.+-..|++|..||......   .+.   ...+.-|    ....+...+.|++. ..+.||+++.-....         
T Consensus        80 ~~~~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~-~~G~Ii~isS~~~~~---------  149 (240)
T d2bd0a1          80 VERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQ-HSGHIFFITSVAATK---------  149 (240)
T ss_dssp             HHHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCGGGTS---------
T ss_pred             HHHcCCcceeecccccccCCccccCCHHHHhhcCCEeehHHHHHHHHHhHHHHhc-CCCceEEEechhhcC---------
Confidence            234467999999998753221   222   2334445    45566677777664 356677765432211         


Q ss_pred             HhCCCCCCCEEEeccchHHHHHHHHHHHhCCCCCCCcceEE
Q 018512          175 KAGTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVV  215 (354)
Q Consensus       175 ~~~~~p~~kviG~t~ld~~r~~~~la~~l~v~~~~v~~~v~  215 (354)
                         ++|..=.++.+.-.-..|.+.+|..++  +..|++-.+
T Consensus       150 ---~~~~~~~Y~asK~al~~lt~~la~el~--~~gIrvn~i  185 (240)
T d2bd0a1         150 ---AFRHSSIYCMSKFGQRGLVETMRLYAR--KCNVRITDV  185 (240)
T ss_dssp             ---CCTTCHHHHHHHHHHHHHHHHHHHHHT--TTTEEEEEE
T ss_pred             ---CCCCChHHHHHHHHHHHHHHHHHHHhC--cCCeEEEEe
Confidence               233222233333333456777777764  455554444

>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: L-aminoacid oxidase
species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]

Probab=96.18  E-value=0.0025  Score=55.86  Aligned_cols=49  Identities=20%  Similarity=0.203  Sum_probs=38.4

Q ss_pred             hhhhhhhcccCCCCCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC
Q 018512           27 SCLRQAKCRAKGGAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   78 (354)
Q Consensus        27 ~~~~~~~~~~~~~~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~   78 (354)
                      .++..+.+......+++||+|||| |..|.+.|..|.+.|+  +|+|+|..+
T Consensus        15 ~~~~~~~~~~~~~~~pkkV~IIGa-G~aGLsaA~~L~~~G~--~V~vlE~~~   63 (370)
T d2iida1          15 EFLEIARNGLKATSNPKHVVIVGA-GMAGLSAAYVLAGAGH--QVTVLEASE   63 (370)
T ss_dssp             HHHHHHHHCSCCCSSCCEEEEECC-BHHHHHHHHHHHHHTC--EEEEECSSS
T ss_pred             HHHHHHhcCCCCCCCCCeEEEECC-CHHHHHHHHHHHHCCC--CEEEEeCCC
Confidence            344444443434566779999999 9999999999999998  999999764

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.15  E-value=0.0013  Score=56.97  Aligned_cols=152  Identities=16%  Similarity=0.218  Sum_probs=82.1

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc--hh---HHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEE
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PG---VTADISHMDTGAVVRGFLGQPQLENALTGMDLVII  116 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~--~g---~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi  116 (354)
                      .+++.|+||++.+|..++..|+..|.  .|++.|+++.  +.   ...|+.+..   .++...  ....+.+..-|++|.
T Consensus         7 gK~~lITGas~GIG~aia~~la~~Ga--~V~~~~r~~~~~~~~~~~~~Dv~~~~---~v~~~~--~~~~~~~g~iDiLVn   79 (237)
T d1uzma1           7 SRSVLVTGGNRGIGLAIAQRLAADGH--KVAVTHRGSGAPKGLFGVEVDVTDSD---AVDRAF--TAVEEHQGPVEVLVS   79 (237)
T ss_dssp             CCEEEETTTTSHHHHHHHHHHHHTTC--EEEEEESSSCCCTTSEEEECCTTCHH---HHHHHH--HHHHHHHSSCSEEEE
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCC--EEEEEECCcchhcCceEEEEecCCHH---HHHHHH--HHHHHhcCCceEEEe
Confidence            35899999999999999999999998  9999999761  10   011111110   011000  112344568999999


Q ss_pred             cCCCCCCC---CCCH---HHHHHHHHH----HHHHHHHHHhhhCCCeEEEEecCCCCCchHHHHHHHHHhCCCCCCCEEE
Q 018512          117 PAGVPRKP---GMTR---DDLFNINAG----IVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLG  186 (354)
Q Consensus       117 ~ag~~~~~---g~~r---~d~~~~n~~----~~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~~~~~~~~~~p~~kviG  186 (354)
                      .||.....   ..+.   ...+.-|+.    ..+.+++.+++. ..+.||++|.-....            +.|..-.++
T Consensus        80 nAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~-~~g~Iv~isS~~~~~------------~~~~~~~Y~  146 (237)
T d1uzma1          80 NAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRN-KFGRMIFIGSVSGLW------------GIGNQANYA  146 (237)
T ss_dssp             ECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-TCEEEEEECCCCC-----------------CCHHHH
T ss_pred             eecccccccHhhCCHHHHHHHHHhhhhhhhhhhhhhhhccccc-CCCceEEEcchhhcc------------CCcccHHHH
Confidence            99864321   1222   233444543    455566666654 355666666433222            111111233


Q ss_pred             eccchHHHHHHHHHHHhCCCCCCCcceEE
Q 018512          187 VTMLDVVRANTFVAEVLGLDPRDVDVPVV  215 (354)
Q Consensus       187 ~t~ld~~r~~~~la~~l~v~~~~v~~~v~  215 (354)
                      .+.-.-..|.+.+|..++  +..|++-.+
T Consensus       147 asKaal~~lt~~lA~e~~--~~gIrVN~I  173 (237)
T d1uzma1         147 ASKAGVIGMARSIARELS--KANVTANVV  173 (237)
T ss_dssp             HHHHHHHHHHHHHHHHHG--GGTEEEEEE
T ss_pred             HHHHHHHHHHHHHHhhhh--cCCceeeee
Confidence            333233456777787764  444544443

>d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.15  E-value=0.019  Score=47.44  Aligned_cols=93  Identities=23%  Similarity=0.334  Sum_probs=60.3

Q ss_pred             CCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcCC
Q 018512           40 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG  119 (354)
Q Consensus        40 ~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~ag  119 (354)
                      ...++|.|+|. |.+|+.++..+..-+.  +|..+|.........+..       +..    .++++.++.||+|++...
T Consensus        42 l~~k~vgiiG~-G~IG~~va~~~~~fg~--~v~~~d~~~~~~~~~~~~-------~~~----~~l~ell~~sDiv~~~~P  107 (184)
T d1ygya1          42 IFGKTVGVVGL-GRIGQLVAQRIAAFGA--YVVAYDPYVSPARAAQLG-------IEL----LSLDDLLARADFISVHLP  107 (184)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHTTTC--EEEEECTTSCHHHHHHHT-------CEE----CCHHHHHHHCSEEEECCC
T ss_pred             ccceeeeeccc-cchhHHHHHHhhhccc--eEEeecCCCChhHHhhcC-------cee----ccHHHHHhhCCEEEEcCC
Confidence            45579999999 9999999998875555  999999865332222211       111    256789999999999743


Q ss_pred             C-CCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecC
Q 018512          120 V-PRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISN  160 (354)
Q Consensus       120 ~-~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tN  160 (354)
                      . +...++-..              +.+....|++++||++-
T Consensus       108 lt~~T~~lin~--------------~~l~~mk~~a~lIN~sR  135 (184)
T d1ygya1         108 KTPETAGLIDK--------------EALAKTKPGVIIVNAAR  135 (184)
T ss_dssp             CSTTTTTCBCH--------------HHHTTSCTTEEEEECSC
T ss_pred             CCchhhhhhhH--------------HHHhhhCCCceEEEecc
Confidence            2 222222111              12233457999999973

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.14  E-value=0.021  Score=50.75  Aligned_cols=157  Identities=11%  Similarity=0.069  Sum_probs=88.0

Q ss_pred             CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCC---CCCeEEEEeC-CCcH----------
Q 018512           41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMD---TGAVVRGFLG-QPQL----------  104 (354)
Q Consensus        41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~---~~~~v~~~~~-~~d~----------  104 (354)
                      +.+.+.|+||++-+|..++..|+..|.  .|++.|++.  .+..+.++....   ....+..+.. -+|.          
T Consensus        11 ~gKvalITGas~GIG~aia~~la~~Ga--~Vvi~~r~~~~l~~~~~el~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~   88 (297)
T d1yxma1          11 QGQVAIVTGGATGIGKAIVKELLELGS--NVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKST   88 (297)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHhhhccccCceEEEEeccCCCHHHHHHHHHHH
Confidence            456899999999999999999999998  899999986  334444554321   1223333211 1221          


Q ss_pred             HhhhCCCcEEEEcCCCCCCCC---CC---HHHHHHHHHH----HHHHHHHHHhhhCCCeEEEEecCCCCCchHHHHHHHH
Q 018512          105 ENALTGMDLVIIPAGVPRKPG---MT---RDDLFNINAG----IVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFK  174 (354)
Q Consensus       105 ~~al~~aDvVIi~ag~~~~~g---~~---r~d~~~~n~~----~~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~~~~~  174 (354)
                      .+.+..-|++|..||......   .+   ....+..|+.    ..+..++.+.+.. .+.|+++|.....          
T Consensus        89 ~~~~G~iDiLVnnAg~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~-~g~Ii~~ss~~~~----------  157 (297)
T d1yxma1          89 LDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEH-GGSIVNIIVPTKA----------  157 (297)
T ss_dssp             HHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHH-CEEEEEECCCCTT----------
T ss_pred             HHHhCCeEEEEeeccccccCchhhhhhhhhhhhhcccccchhhHHHHHHHhhcccc-ccccccccccccc----------
Confidence            123468999999988653221   12   2233445543    4455556655544 4445555532211          


Q ss_pred             HhCCCCCCCEEEeccchHHHHHHHHHHHhCCCCCCCcceEE
Q 018512          175 KAGTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVV  215 (354)
Q Consensus       175 ~~~~~p~~kviG~t~ld~~r~~~~la~~l~v~~~~v~~~v~  215 (354)
                         ++|..-.++.+.-.-..|.+.+|..++  +..|++-.+
T Consensus       158 ---~~~~~~~Y~asKaal~~ltk~lA~el~--~~gIrVN~I  193 (297)
T d1yxma1         158 ---GFPLAVHSGAARAGVYNLTKSLALEWA--CSGIRINCV  193 (297)
T ss_dssp             ---CCTTCHHHHHHHHHHHHHHHHHHHHTG--GGTEEEEEE
T ss_pred             ---cccccccchhHHHHHHHHHHHHHHHhc--ccCceEEEe
Confidence               122211222333334457788888774  455544443

>d2cvoa1 c.2.1.3 (A:68-218,A:384-415) Putative semialdehyde dehydrogenase {Rice (Oryza sativa) [TaxId: 4530]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Putative semialdehyde dehydrogenase
species: Rice (Oryza sativa) [TaxId: 4530]

Probab=96.09  E-value=0.0023  Score=53.28  Aligned_cols=74  Identities=18%  Similarity=0.306  Sum_probs=44.4

Q ss_pred             CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhH-HHHHh-cCCCCCeEEEEeCCCcHHhhhCCCcEEEEcC
Q 018512           41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGV-TADIS-HMDTGAVVRGFLGQPQLENALTGMDLVIIPA  118 (354)
Q Consensus        41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~-~~dl~-~~~~~~~v~~~~~~~d~~~al~~aDvVIi~a  118 (354)
                      +++||+|+||+|++|.-+...|...+.+ ||..+--+...|. ..+.. +..... .....  ....+.+.++|+|+.+.
T Consensus         4 ~kikVaIlGATGyvG~elirLL~~HP~~-ei~~l~S~~~aG~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~Dvvf~al   79 (183)
T d2cvoa1           4 EEVRIAVLGASGYTGAEIVRLLANHPQF-RIKVMTADRKAGEQFGSVFPHLITQD-LPNLV--AVKDADFSNVDAVFCCL   79 (183)
T ss_dssp             SCEEEEEESCSSHHHHHHHHHHTTCSSE-EEEEEECSTTTTSCHHHHCGGGTTSC-CCCCB--CGGGCCGGGCSEEEECC
T ss_pred             CccEEEEECcccHHHHHHHHHHHhCCCc-eEEEEeccccCCCccccccccccccc-cccch--hhhhhhhcccceeeecc
Confidence            4679999999999999999999887755 6666654442221 11111 111111 11111  11235568999999974

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

Probab=96.04  E-value=0.058  Score=46.11  Aligned_cols=156  Identities=16%  Similarity=0.143  Sum_probs=90.8

Q ss_pred             CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEe-CCCc---H-------HhhhC
Q 018512           41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFL-GQPQ---L-------ENALT  109 (354)
Q Consensus        41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~-~~~d---~-------~~al~  109 (354)
                      +.+++.|+||++.+|..+|..|+..|.  +|++.|++... ......+..  ..+..+. +-.+   .       .+.+.
T Consensus         4 ~gK~alItGas~GIG~aia~~l~~~G~--~V~~~~r~~~~-~~~~~~~~~--~~~~~~~~Dls~~~~i~~~~~~i~~~~g   78 (241)
T d2a4ka1           4 SGKTILVTGAASGIGRAALDLFAREGA--SLVAVDREERL-LAEAVAALE--AEAIAVVADVSDPKAVEAVFAEALEEFG   78 (241)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC--EEEEEESCHHH-HHHHHHTCC--SSEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC--EEEEEECCHHH-HHHHHHHcC--CceEEEEecCCCHHHHHHHHHHHHHHhC
Confidence            345889999999999999999999998  99999997621 111122222  1111111 1111   1       23346


Q ss_pred             CCcEEEEcCCCCCCC---CCC---HHHHHHHHHHHHHHHHHHHhhhCC-CeEEEEecCCCCCchHHHHHHHHHhCCCCCC
Q 018512          110 GMDLVIIPAGVPRKP---GMT---RDDLFNINAGIVRTLCEGIAKCCP-NATVNLISNPVNSTVPIAAEVFKKAGTYDPK  182 (354)
Q Consensus       110 ~aDvVIi~ag~~~~~---g~~---r~d~~~~n~~~~~~i~~~i~~~~p-~a~viv~tNPv~~~~~~~~~~~~~~~~~p~~  182 (354)
                      .-|++|..||.....   ..+   ..+.+.-|+.....+.+....+.. ...+++.|.......+             ..
T Consensus        79 ~iDiLinnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~k~~~~~~~~~~~i~~~ss~a~~~~~-------------~~  145 (241)
T d2a4ka1          79 RLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVAGLGAF-------------GL  145 (241)
T ss_dssp             CCCEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCTTCCHH-------------HH
T ss_pred             CccEeccccccccccchhhhhccccccccccccccccccccccccccccccceeecccccccccc-------------Cc
Confidence            799999988754321   122   234566777777777777666653 4455555544322211             01


Q ss_pred             CEEEeccchHHHHHHHHHHHhCCCCCCCcceEEe
Q 018512          183 KLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVVG  216 (354)
Q Consensus       183 kviG~t~ld~~r~~~~la~~l~v~~~~v~~~v~G  216 (354)
                      -.++.+.-.-..|.+.+|+.++  +..|++-.+-
T Consensus       146 ~~Y~~sK~al~~lt~~lA~el~--~~gIrvN~I~  177 (241)
T d2a4ka1         146 AHYAAGKLGVVGLARTLALELA--RKGVRVNVLL  177 (241)
T ss_dssp             HHHHHCSSHHHHHHHHHHHHHT--TTTCEEEEEE
T ss_pred             cccchhhHHHHHHHHHHHHHHh--HhCCEEeeec
Confidence            1233444445678899999986  4556554443

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=96.04  E-value=0.038  Score=49.10  Aligned_cols=155  Identities=13%  Similarity=0.168  Sum_probs=86.3

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC-----------chhHHHHHhcCCCCCeEEE-EeCCCcH-----
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN-----------TPGVTADISHMDTGAVVRG-FLGQPQL-----  104 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~-----------~~g~~~dl~~~~~~~~v~~-~~~~~d~-----  104 (354)
                      .+.+.|+||++.+|..+|..|+..|.  .|++.|++.           ++....++....  ..... .....+.     
T Consensus         7 gKvalITGas~GIG~aiA~~la~~Ga--~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~d~~~~~~~~~~v~   82 (302)
T d1gz6a_           7 GRVVLVTGAGGGLGRAYALAFAERGA--LVVVNDLGGDFKGVGKGSSAADKVVEEIRRRG--GKAVANYDSVEAGEKLVK   82 (302)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHHTTC--EEEEECCCBCTTSCBCCSHHHHHHHHHHHHTT--CEEEEECCCGGGHHHHHH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHcCC--EEEEEeCCchhhhhhhhHHHHHHHHHHHhhcc--cccccccchHHHHHHHHH
Confidence            34688889999999999999999998  899999763           111222332221  11111 1111121     


Q ss_pred             --HhhhCCCcEEEEcCCCCCCCC---CCH---HHHHHHH----HHHHHHHHHHHhhhCCCeEEEEecCCCCCchHHHHHH
Q 018512          105 --ENALTGMDLVIIPAGVPRKPG---MTR---DDLFNIN----AGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEV  172 (354)
Q Consensus       105 --~~al~~aDvVIi~ag~~~~~g---~~r---~d~~~~n----~~~~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~~~  172 (354)
                        .+.+-..|++|..||......   .+.   ...+.-|    +...+...+.|++.. .+.||++|....         
T Consensus        83 ~~~~~~G~iDiLVnNAGi~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~-~G~IV~isS~~~---------  152 (302)
T d1gz6a_          83 TALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQN-YGRIIMTASASG---------  152 (302)
T ss_dssp             HHHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-CEEEEEECCHHH---------
T ss_pred             HHHHHcCCCCEEEECCccCCCCChhhCCHHHHhhhhceeehhhHHHHHHhHHHHHhCC-CcEEEEeCChhh---------
Confidence              234567999999998754221   222   2334445    455666677777654 567777763210         


Q ss_pred             HHHhCCCCCCCEEEeccchHHHHHHHHHHHhCCCCCCCcceEE
Q 018512          173 FKKAGTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVV  215 (354)
Q Consensus       173 ~~~~~~~p~~kviG~t~ld~~r~~~~la~~l~v~~~~v~~~v~  215 (354)
                       .+  +.|..=.++.+.-.-..|.+.+|..++  +..|++-.+
T Consensus       153 -~~--~~~~~~~Y~asKaal~~lt~~la~E~~--~~gIrVN~I  190 (302)
T d1gz6a_         153 -IY--GNFGQANYSAAKLGLLGLANTLVIEGR--KNNIHCNTI  190 (302)
T ss_dssp             -HH--CCTTCHHHHHHHHHHHHHHHHHHHHTG--GGTEEEEEE
T ss_pred             -cC--CCCCcHHHHHHHHHHHHHHHHHHHHHh--ccCCceeee
Confidence             11  233222333333334566777777764  445544333

>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Rck domain from putative potassium channel Kch
species: Escherichia coli [TaxId: 562]

Probab=95.99  E-value=0.032  Score=44.10  Aligned_cols=100  Identities=8%  Similarity=0.026  Sum_probs=61.7

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc--hhHHHHHhcCCCCCeEEEEeCCCc---H-HhhhCCCcEEE
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFLGQPQ---L-ENALTGMDLVI  115 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~--~g~~~dl~~~~~~~~v~~~~~~~d---~-~~al~~aDvVI  115 (354)
                      .-+|.|+|. |.+|..++..|...+.  +++++|.++.  .....++..... ..+.+  ..++   + +..+..||.||
T Consensus         3 knHiII~G~-g~~g~~l~~~L~~~~~--~v~vId~d~~~~~~~~~~~~~~~~-~vi~G--d~~d~~~L~~a~i~~a~~vi   76 (153)
T d1id1a_           3 KDHFIVCGH-SILAINTILQLNQRGQ--NVTVISNLPEDDIKQLEQRLGDNA-DVIPG--DSNDSSVLKKAGIDRCRAIL   76 (153)
T ss_dssp             CSCEEEECC-SHHHHHHHHHHHHTTC--CEEEEECCCHHHHHHHHHHHCTTC-EEEES--CTTSHHHHHHHTTTTCSEEE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCC--CEEEEeccchhHHHHHHHhhcCCc-EEEEc--cCcchHHHHHhccccCCEEE
Confidence            348999999 9999999999999887  8999998862  223333332211 11221  1222   1 34468899999


Q ss_pred             EcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec-CCC
Q 018512          116 IPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS-NPV  162 (354)
Q Consensus       116 i~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~t-NPv  162 (354)
                      ++.+.         |  ..|+..    +..+++.+|+..++.-+ +|-
T Consensus        77 ~~~~~---------d--~~n~~~----~~~~r~~~~~~~iia~~~~~~  109 (153)
T d1id1a_          77 ALSDN---------D--ADNAFV----VLSAKDMSSDVKTVLAVSDSK  109 (153)
T ss_dssp             ECSSC---------H--HHHHHH----HHHHHHHTSSSCEEEECSSGG
T ss_pred             Ecccc---------H--HHHHHH----HHHHHHhCCCCceEEEEcCHH
Confidence            98421         1  334433    34556778887555554 554

>d2g17a1 c.2.1.3 (A:1-153,A:309-334) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC
species: Salmonella typhimurium [TaxId: 90371]

Probab=95.89  E-value=0.015  Score=47.72  Aligned_cols=73  Identities=18%  Similarity=0.350  Sum_probs=42.9

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEec---CCchhHH-HHH-hcCC--CCCeEEEEeCCCcHHhhhCCCcEE
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDV---VNTPGVT-ADI-SHMD--TGAVVRGFLGQPQLENALTGMDLV  114 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~---~~~~g~~-~dl-~~~~--~~~~v~~~~~~~d~~~al~~aDvV  114 (354)
                      |+||+|+||+|++|.-+...|...+.+ +|.-+-.   ....|.. .+. .+..  ....+...   .+......++|+|
T Consensus         1 MikVaIiGATGyvG~eLlrlL~~HP~~-ei~~l~~~s~~~~aGk~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~dvv   76 (179)
T d2g17a1           1 MLNTLIVGASGYAGAELVSYVNRHPHM-TITALTVSAQSNDAGKLISDLHPQLKGIVDLPLQPM---SDVRDFSADVDVV   76 (179)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHCTTE-EEEEEEEETTCTTTTCBHHHHCGGGTTTCCCBEEEE---SCGGGTCTTCCEE
T ss_pred             CcEEEEECcccHHHHHHHHHHHhCCCC-ceEeeEeecccccccccccccccccccccccccccc---hhhhhhhccccee
Confidence            579999999999999999999987754 5543321   1111211 111 1111  11223322   2334556899999


Q ss_pred             EEcC
Q 018512          115 IIPA  118 (354)
Q Consensus       115 Ii~a  118 (354)
                      +.+.
T Consensus        77 f~al   80 (179)
T d2g17a1          77 FLAT   80 (179)
T ss_dssp             EECS
T ss_pred             eccc
Confidence            9984

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=95.87  E-value=0.034  Score=47.91  Aligned_cols=153  Identities=8%  Similarity=0.026  Sum_probs=84.5

Q ss_pred             eEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC-chhHHHHHhcCCCCCeEEEEeCCCcH-------HhhhCCCcEEE
Q 018512           44 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN-TPGVTADISHMDTGAVVRGFLGQPQL-------ENALTGMDLVI  115 (354)
Q Consensus        44 kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~-~~g~~~dl~~~~~~~~v~~~~~~~d~-------~~al~~aDvVI  115 (354)
                      ...|+||++.+|..+|..|++.|.  .|++.|++. .......+.......++.   ...+.       .+.+-.-|++|
T Consensus         2 TAlVTGas~GiG~aiA~~la~~Ga--~V~i~~r~~~~~~~~~~~~~~~~~~dv~---~~~~~~~~~~~~~~~~G~iDiLV   76 (252)
T d1zmta1           2 TAIVTNVKHFGGMGSALRLSEAGH--TVACHDESFKQKDELEAFAETYPQLKPM---SEQEPAELIEAVTSAYGQVDVLV   76 (252)
T ss_dssp             EEEESSTTSTTHHHHHHHHHHTTC--EEEECCGGGGSHHHHHHHHHHCTTSEEC---CCCSHHHHHHHHHHHHSCCCEEE
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHhhhCcEEEeccC---CHHHHHHHHHHHHHHcCCCCEEE
Confidence            467999999999999999999998  899999875 211111111111112221   11222       34456899999


Q ss_pred             EcCCCCCCCC----CCHHH---HHHHH----HHHHHHHHHHHhhhCCCeEEEEecCCCCCchHHHHHHHHHhCCCCCCCE
Q 018512          116 IPAGVPRKPG----MTRDD---LFNIN----AGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKL  184 (354)
Q Consensus       116 i~ag~~~~~g----~~r~d---~~~~n----~~~~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~~~~~~~~~~p~~kv  184 (354)
                      ..||.....+    .+..|   .+..|    ....+.+++.|++.. .+.||++|.-....            +.|..-.
T Consensus        77 nNAg~~~~~~~~~~~~~e~~~~~~~vnl~~~~~~~~~~~~~m~~~~-~G~IV~isS~~~~~------------~~~~~~~  143 (252)
T d1zmta1          77 SNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRK-SGHIIFITSATPFG------------PWKELST  143 (252)
T ss_dssp             EECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCSTTTS------------CCTTCHH
T ss_pred             ECCcCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhcccc-cceeeccccccccc------------ccccccc
Confidence            9887543222    23232   22333    456677777787664 45566665332221            1221112


Q ss_pred             EEeccchHHHHHHHHHHHhCCCCCCCcceEEe
Q 018512          185 LGVTMLDVVRANTFVAEVLGLDPRDVDVPVVG  216 (354)
Q Consensus       185 iG~t~ld~~r~~~~la~~l~v~~~~v~~~v~G  216 (354)
                      ++.+.-.-..|.+.+|..++  +..|++-.+-
T Consensus       144 Y~asKaal~~lt~~lA~ela--~~gIrVN~I~  173 (252)
T d1zmta1         144 YTSARAGACTLANALSKELG--EYNIPVFAIG  173 (252)
T ss_dssp             HHHHHHHHHHHHHHHHHHHG--GGTCCEEEEE
T ss_pred             cccccccHHHHHHHHHHHhc--ccCcEEEEEe
Confidence            33333233456777887775  4555544443

>d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Putative formate dehydrogenase
species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]

Probab=95.87  E-value=0.0086  Score=49.56  Aligned_cols=89  Identities=21%  Similarity=0.201  Sum_probs=58.8

Q ss_pred             CCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcCC
Q 018512           40 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG  119 (354)
Q Consensus        40 ~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~ag  119 (354)
                      -..++|.|||. |.+|..++..+..-|.  +|..+|+...+        ...    ..   ..++++.+++||+|++...
T Consensus        40 l~gk~vgIiG~-G~IG~~va~~l~~~g~--~v~~~d~~~~~--------~~~----~~---~~~l~ell~~sDiv~~~~p  101 (181)
T d1qp8a1          40 IQGEKVAVLGL-GEIGTRVGKILAALGA--QVRGFSRTPKE--------GPW----RF---TNSLEEALREARAAVCALP  101 (181)
T ss_dssp             CTTCEEEEESC-STHHHHHHHHHHHTTC--EEEEECSSCCC--------SSS----CC---BSCSHHHHTTCSEEEECCC
T ss_pred             ccCceEEEecc-ccccccceeeeecccc--ccccccccccc--------cce----ee---eechhhhhhccchhhcccc
Confidence            44579999999 9999999999987676  99999986521        110    00   1356789999999999643


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 018512          120 VPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  159 (354)
Q Consensus       120 ~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~t  159 (354)
                        ..+ +++ .++  |       .+.+....|++++|+++
T Consensus       102 --l~~-~t~-~li--~-------~~~l~~mk~~ailIN~~  128 (181)
T d1qp8a1         102 --LNK-HTR-GLV--K-------YQHLALMAEDAVFVNVG  128 (181)
T ss_dssp             --CST-TTT-TCB--C-------HHHHTTSCTTCEEEECS
T ss_pred             --ccc-ccc-ccc--c-------cceeeeccccceEEecc
Confidence              211 111 000  1       12333345789999987

>d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-lactate dehydrogenase
species: Lactobacillus helveticus [TaxId: 1587]

Probab=95.85  E-value=0.018  Score=48.23  Aligned_cols=63  Identities=19%  Similarity=0.300  Sum_probs=46.3

Q ss_pred             CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcC
Q 018512           41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA  118 (354)
Q Consensus        41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~a  118 (354)
                      ..++|.|+|. |.+|+.+|..+..-|.  +|..||....... .  .. ..        ...++++.++.||+|++..
T Consensus        42 ~gk~vgIiG~-G~IG~~va~~l~~fg~--~V~~~d~~~~~~~-~--~~-~~--------~~~~l~~~l~~sDii~~~~  104 (197)
T d1j4aa1          42 RDQVVGVVGT-GHIGQVFMQIMEGFGA--KVITYDIFRNPEL-E--KK-GY--------YVDSLDDLYKQADVISLHV  104 (197)
T ss_dssp             GGSEEEEECC-SHHHHHHHHHHHHTTC--EEEEECSSCCHHH-H--HT-TC--------BCSCHHHHHHHCSEEEECS
T ss_pred             cCCeEEEecc-cccchhHHHhHhhhcc--cccccCccccccc-c--cc-ee--------eeccccccccccccccccC
Confidence            4569999999 9999999999976666  9999998653211 1  11 11        1235788999999999975

>d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Rhodotorula gracilis [TaxId: 5286]

Probab=95.75  E-value=0.0057  Score=51.77  Aligned_cols=33  Identities=24%  Similarity=0.374  Sum_probs=30.6

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   78 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~   78 (354)
                      .||+|||| |-.|.+.|+.|.++|+  +|.|+|.+.
T Consensus         7 ~kVvVIGa-GiaGl~~A~~L~~~G~--~V~vier~~   39 (268)
T d1c0pa1           7 KRVVVLGS-GVIGLSSALILARKGY--SVHILARDL   39 (268)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTC--EEEEEESSC
T ss_pred             CcEEEECc-cHHHHHHHHHHHHCCC--CEEEEeCCC
Confidence            49999999 9999999999999998  999999864

>d1diha1 c.2.1.3 (A:2-130,A:241-273) Dihydrodipicolinate reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Escherichia coli [TaxId: 562]

Probab=95.73  E-value=0.0045  Score=50.43  Aligned_cols=73  Identities=21%  Similarity=0.184  Sum_probs=43.6

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCC--CCeEEEEeCCCcHHhhhCCCcEEEEc
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDT--GAVVRGFLGQPQLENALTGMDLVIIP  117 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~--~~~v~~~~~~~d~~~al~~aDvVIi~  117 (354)
                      .+||+|+|++|.+|+.++..+...+-..=+..+|+......-.|+.....  ...+..   +.++++.++++|+||=.
T Consensus         4 ~ikI~i~Ga~GrMG~~i~~~i~~~~~~~lv~~~~~~~~~~~g~d~~~~~~~~~~~~~~---~~~~~~~~~~~DViIDF   78 (162)
T d1diha1           4 NIRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGSDAGELAGAGKTGVTV---QSSLDAVKDDFDVFIDF   78 (162)
T ss_dssp             BEEEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTTCSCCTTCSSSSSCCSCCE---ESCSTTTTTSCSEEEEC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecccchhccchhhhhhccccCCcee---eccHHHHhcccceEEEe
Confidence            46999999999999999998887653222345665431111122222211  122222   23556788999988764

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

Probab=95.68  E-value=0.054  Score=47.32  Aligned_cols=151  Identities=22%  Similarity=0.194  Sum_probs=83.9

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCCCCeEEEE-eCCCc----------HHhhh
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGF-LGQPQ----------LENAL  108 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~~~~v~~~-~~~~d----------~~~al  108 (354)
                      .+.+.|+||++.+|..++..|+..|.  +|++.|+++  +.....++..     .+..+ .+-++          ..+.+
T Consensus         5 gK~alITGas~GIG~aia~~la~~Ga--~V~i~~r~~~~l~~~~~~~~~-----~~~~~~~Dv~~~~~~~~~~~~~~~~~   77 (276)
T d1bdba_           5 GEAVLITGGASGLGRALVDRFVAEGA--KVAVLDKSAERLAELETDHGD-----NVLGIVGDVRSLEDQKQAASRCVARF   77 (276)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHGG-----GEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHcCC-----CeeEEecccccHHHHHHHHHHHHHHh
Confidence            45799999999999999999999998  999999975  2222233321     11111 11111          12345


Q ss_pred             CCCcEEEEcCCCCCCCC-------CC----HHHHHHHH----HHHHHHHHHHHhhhCCCeEEEEecCCCCCchHHHHHHH
Q 018512          109 TGMDLVIIPAGVPRKPG-------MT----RDDLFNIN----AGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVF  173 (354)
Q Consensus       109 ~~aDvVIi~ag~~~~~g-------~~----r~d~~~~n----~~~~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~~~~  173 (354)
                      ...|++|..||......       +.    ....+.-|    +...+...+.|++.. ..+|++.|. ....        
T Consensus        78 g~idilvnnAG~~~~~~~~~~~~~e~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~-g~iI~i~S~-~~~~--------  147 (276)
T d1bdba_          78 GKIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIHAVKACLPALVASR-GNVIFTISN-AGFY--------  147 (276)
T ss_dssp             SCCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCG-GGTS--------
T ss_pred             CCcccccccccccCCCCccccccccchhhhhhHHHHHhhHHHHHHHHHHHHHHHhcC-CCceeeeec-hhcc--------
Confidence            68999999998642211       11    12233344    455666677776553 444444442 1111        


Q ss_pred             HHhCCCCCCCEEEeccchHHHHHHHHHHHhCCCCCCCcceEEe
Q 018512          174 KKAGTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVVG  216 (354)
Q Consensus       174 ~~~~~~p~~kviG~t~ld~~r~~~~la~~l~v~~~~v~~~v~G  216 (354)
                          +.|..=.++.+.-.-..|.+.+|..++  +. |++-.+-
T Consensus       148 ----~~~~~~~Y~asKaal~~ltr~lA~ela--~~-IrVN~I~  183 (276)
T d1bdba_         148 ----PNGGGPLYTAAKHAIVGLVRELAFELA--PY-VRVNGVG  183 (276)
T ss_dssp             ----TTSSCHHHHHHHHHHHHHHHHHHHHHT--TT-CEEEEEE
T ss_pred             ----CCCCCchHHHHHHHHHHHHHHHHHHhh--cc-eEEcccC
Confidence                122211233333234467788888886  33 6554443

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

Probab=95.67  E-value=0.016  Score=50.09  Aligned_cols=157  Identities=15%  Similarity=0.211  Sum_probs=85.2

Q ss_pred             CCeEEEEcCCC--chHHHHHHHHHhCCCCcEEEEEecCC-chhHHHHHhcCCCCCeEEEEeCCCc---H-------Hhhh
Q 018512           42 GFKVAILGAAG--GIGQPLAMLMKINPLVSVLHLYDVVN-TPGVTADISHMDTGAVVRGFLGQPQ---L-------ENAL  108 (354)
Q Consensus        42 ~~kI~IiGa~G--~vG~~~a~~l~~~~~~~ei~L~D~~~-~~g~~~dl~~~~~~~~v~~~~~~~d---~-------~~al  108 (354)
                      .+++.|+||+|  -+|..+|..|+..|.  +|++.|+++ ....+.++.........-. .+-+|   .       .+.+
T Consensus         8 gK~alITGas~~~GIG~aiA~~la~~Ga--~V~i~~~~~~~~~~~~~~~~~~~~~~~~~-~D~~~~~~v~~~~~~~~~~~   84 (256)
T d1ulua_           8 GKKALVMGVTNQRSLGFAIAAKLKEAGA--EVALSYQAERLRPEAEKLAEALGGALLFR-ADVTQDEELDALFAGVKEAF   84 (256)
T ss_dssp             TCEEEEESCCCSSSHHHHHHHHHHHTTC--EEEEEESSGGGHHHHHHHHHHTTCCEEEE-CCTTCHHHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCCCchHHHHHHHHHHHCCC--EEEEEeCcHHHHHHHHHhhhccCcccccc-cccCCHHHHHHHHHHHHHhc
Confidence            45799999976  599999999999998  899999876 2222332222111111111 11111   1       2334


Q ss_pred             CCCcEEEEcCCCCCC-------CCCCHHH---HHHHHHHHHHHHHHHHhhhC-CCeEEEEecCCCCCchHHHHHHHHHhC
Q 018512          109 TGMDLVIIPAGVPRK-------PGMTRDD---LFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNSTVPIAAEVFKKAG  177 (354)
Q Consensus       109 ~~aDvVIi~ag~~~~-------~g~~r~d---~~~~n~~~~~~i~~~i~~~~-p~a~viv~tNPv~~~~~~~~~~~~~~~  177 (354)
                      -..|++|..||....       ...+..+   .+.-|+.....+++....+- ..+.|+++|.-...            .
T Consensus        85 g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~Iv~isS~~~~------------~  152 (256)
T d1ulua_          85 GGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYASE------------K  152 (256)
T ss_dssp             SSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGGT------------S
T ss_pred             CCceEEEeccccccccccccchhhhhhhhhhHhhhhhHHHHHHHHHHHHHHhccCCEEEEEeehHhc------------C
Confidence            678999999886421       1122222   34456655556665554433 35667766532211            1


Q ss_pred             CCCCCCEEEeccchHHHHHHHHHHHhCCCCCCCcceEE
Q 018512          178 TYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVV  215 (354)
Q Consensus       178 ~~p~~kviG~t~ld~~r~~~~la~~l~v~~~~v~~~v~  215 (354)
                      +.|..-.++.+.-.-..+.+.+|..++  +..|++-.+
T Consensus       153 ~~~~~~~Y~asKaal~~ltr~lA~ela--~~gIrVN~I  188 (256)
T d1ulua_         153 VVPKYNVMAIAKAALEASVRYLAYELG--PKGVRVNAI  188 (256)
T ss_dssp             BCTTCHHHHHHHHHHHHHHHHHHHHHG--GGTCEEEEE
T ss_pred             CCCCchHHHHHHHHHHHHHHHHHHHhc--ccCCEEeee
Confidence            223222333333333456778888875  455654444

>d1x7da_ c.2.1.13 (A:) Ornithine cyclodeaminase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Ornithine cyclodeaminase-like
domain: Ornithine cyclodeaminase
species: Pseudomonas putida [TaxId: 303]

Probab=95.66  E-value=0.024  Score=51.47  Aligned_cols=75  Identities=19%  Similarity=0.325  Sum_probs=51.5

Q ss_pred             CCCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEE
Q 018512           39 GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVII  116 (354)
Q Consensus        39 ~~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi  116 (354)
                      +.....++|||+ |..+..-+..+..--.+.+|.++|+++  ....+.++.... ...+..   ..++++++++||+|+.
T Consensus       125 ~~da~~l~iiG~-G~QA~~~~~a~~~v~~i~~V~v~~r~~~~~~~~~~~l~~~~-g~~v~~---~~s~~eav~~ADIi~t  199 (340)
T d1x7da_         125 RPNARKMALIGN-GAQSEFQALAFHKHLGIEEIVAYDTDPLATAKLIANLKEYS-GLTIRR---ASSVAEAVKGVDIITT  199 (340)
T ss_dssp             CTTCCEEEEECC-STTHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHTTCT-TCEEEE---CSSHHHHHTTCSEEEE
T ss_pred             ccCCceEEEEcc-cHHHHHHHHHHhhhcceeeeEEEecChHHHHHHHHhhhhcc-CCCcee---cCCHHHHHhcCCceee
Confidence            445569999999 988887666554433367999999986  333455564322 233443   3578999999999998


Q ss_pred             cC
Q 018512          117 PA  118 (354)
Q Consensus       117 ~a  118 (354)
                      +.
T Consensus       200 ~T  201 (340)
T d1x7da_         200 VT  201 (340)
T ss_dssp             CC
T ss_pred             cc
Confidence            54

>d1xeaa1 c.2.1.3 (A:2-122,A:267-312) Putative oxidoreductase VCA1048 {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Putative oxidoreductase VCA1048
species: Vibrio cholerae [TaxId: 666]

Probab=95.64  E-value=0.043  Score=43.98  Aligned_cols=66  Identities=23%  Similarity=0.260  Sum_probs=39.7

Q ss_pred             CCeEEEEcCCCchHHH-HHHHHHhCCCCcEEEEEecCCc--hhHHHHHhcCCCCCeEEEEeCCCcHHhhh-CCCcEEEEc
Q 018512           42 GFKVAILGAAGGIGQP-LAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFLGQPQLENAL-TGMDLVIIP  117 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~-~a~~l~~~~~~~ei~L~D~~~~--~g~~~dl~~~~~~~~v~~~~~~~d~~~al-~~aDvVIi~  117 (354)
                      .+||+|||+ |.+|.. ....+...+. .+++++|.++.  .....++....      .   .+|+++.+ .+.|+|+++
T Consensus         1 tirvgiiG~-G~~~~~~~~~~l~~~~~-~~~~~~d~~~~~~~~~~~~~~~~~------~---~~~~~~ll~~~iD~V~I~   69 (167)
T d1xeaa1           1 SLKIAMIGL-GDIAQKAYLPVLAQWPD-IELVLCTRNPKVLGTLATRYRVSA------T---CTDYRDVLQYGVDAVMIH   69 (167)
T ss_dssp             CEEEEEECC-CHHHHHTHHHHHTTSTT-EEEEEECSCHHHHHHHHHHTTCCC------C---CSSTTGGGGGCCSEEEEC
T ss_pred             CeEEEEEcC-CHHHHHHHHHHHHhCCC-cEEEEEECCHHHHHHHHHhccccc------c---cccHHHhcccccceeccc
Confidence            379999999 999976 4555544433 38889998762  22222222111      1   23444545 378999987


Q ss_pred             C
Q 018512          118 A  118 (354)
Q Consensus       118 a  118 (354)
                      .
T Consensus        70 t   70 (167)
T d1xeaa1          70 A   70 (167)
T ss_dssp             S
T ss_pred             c
Confidence            3

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=95.63  E-value=0.029  Score=48.50  Aligned_cols=156  Identities=17%  Similarity=0.157  Sum_probs=81.5

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC---chhHHHHHhcCCCCCeEEEE-eCCCcH----------Hhhh
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN---TPGVTADISHMDTGAVVRGF-LGQPQL----------ENAL  108 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~---~~g~~~dl~~~~~~~~v~~~-~~~~d~----------~~al  108 (354)
                      +.+.|+||++-+|..+|..|+..|.  +|++.+.+.   .+....++.....  .+..+ .+-+|.          .+.+
T Consensus         7 K~alITGas~GIG~aia~~la~~G~--~Vvi~~~~~~~~~~~~~~~~~~~g~--~~~~~~~D~~~~~~v~~~~~~~~~~~   82 (259)
T d1ja9a_           7 KVALTTGAGRGIGRGIAIELGRRGA--SVVVNYGSSSKAAEEVVAELKKLGA--QGVAIQADISKPSEVVALFDKAVSHF   82 (259)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHTTC--EEEEEESSCHHHHHHHHHHHHHTTC--CEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHcCC--EEEEEcCCChHHHHHHHHHHHHcCC--CceEecCCCCCHHHHHHHHHHHHHHc
Confidence            4788999999999999999999998  888866554   2233344444321  22221 111221          2344


Q ss_pred             CCCcEEEEcCCCCCCCC---CCH---HHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecCCCCCchHHHHHHHHHhCCCCC
Q 018512          109 TGMDLVIIPAGVPRKPG---MTR---DDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNSTVPIAAEVFKKAGTYDP  181 (354)
Q Consensus       109 ~~aDvVIi~ag~~~~~g---~~r---~d~~~~n~~~~~~i~~~i~~~~-p~a~viv~tNPv~~~~~~~~~~~~~~~~~p~  181 (354)
                      -.-|++|..+|......   .+.   ...+..|+.....+++.+.++. .++.+++++......           .++|.
T Consensus        83 g~idilinnag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~~iii~s~~~~~-----------~~~~~  151 (259)
T d1ja9a_          83 GGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGGRIILTSSIAAVM-----------TGIPN  151 (259)
T ss_dssp             SCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEEEEEEEECCGGGTC-----------CSCCS
T ss_pred             CCCcEEEeccccccccccccchHHHHHHHHhhccceeeeehhhhhhhhhcCCcccccccccccc-----------cCCCC
Confidence            58999999998653221   222   2334455544433444333332 234444443211111           12322


Q ss_pred             CCEEEeccchHHHHHHHHHHHhCCCCCCCcceEE
Q 018512          182 KKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVV  215 (354)
Q Consensus       182 ~kviG~t~ld~~r~~~~la~~l~v~~~~v~~~v~  215 (354)
                      .=.++.+.-.-..+.+.+|..++  +..|++-.+
T Consensus       152 ~~~Y~asK~al~~l~r~lA~e~~--~~gIrvN~I  183 (259)
T d1ja9a_         152 HALYAGSKAAVEGFCRAFAVDCG--AKGVTVNCI  183 (259)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHG--GGTCEEEEE
T ss_pred             chhHHHHHHHHHHHHHHHHHHHh--hcCeEEecc
Confidence            22223333333457788888876  455644433

>d2cvza2 c.2.1.6 (A:2-157) Hydroxyisobutyrate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=95.62  E-value=0.017  Score=46.12  Aligned_cols=61  Identities=15%  Similarity=0.121  Sum_probs=38.4

Q ss_pred             eEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcC
Q 018512           44 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA  118 (354)
Q Consensus        44 kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~a  118 (354)
                      ||.+||. |.+|+.+|..|+..++  .++ +++...+.  .++..... . .   .  .. .+.+.++|++|.+.
T Consensus         2 kIg~IGl-G~MG~~ma~~L~~~g~--~~~-~~~~~~~~--~~~~~~~~-~-~---~--~~-~~~~~~~~~~i~~~   62 (156)
T d2cvza2           2 KVAFIGL-GAMGYPMAGHLARRFP--TLV-WNRTFEKA--LRHQEEFG-S-E---A--VP-LERVAEARVIFTCL   62 (156)
T ss_dssp             CEEEECC-STTHHHHHHHHHTTSC--EEE-ECSSTHHH--HHHHHHHC-C-E---E--CC-GGGGGGCSEEEECC
T ss_pred             eEEEEeH-HHHHHHHHHHHHhCCC--EEE-EeCCHHHH--HHHHHHcC-C-c---c--cc-cccccceeEEEecc
Confidence            8999999 9999999999998776  554 55443221  11221111 1 1   1  12 35577899999873

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.51  E-value=0.052  Score=47.20  Aligned_cols=115  Identities=17%  Similarity=0.148  Sum_probs=68.2

Q ss_pred             CeEE-EEcCCCchHHHHHHHHHhC-CCCcEEEEEecCC--chhHHHHHhcCCCCCeEEEEeCCCcH----------Hhhh
Q 018512           43 FKVA-ILGAAGGIGQPLAMLMKIN-PLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLGQPQL----------ENAL  108 (354)
Q Consensus        43 ~kI~-IiGa~G~vG~~~a~~l~~~-~~~~ei~L~D~~~--~~g~~~dl~~~~~~~~v~~~~~~~d~----------~~al  108 (354)
                      ++|+ |+||++-+|..+|..|+.. +.  .|++.+++.  .+..+.++............ +-+|.          .+.+
T Consensus         3 ~rVAlVTGas~GIG~a~A~~la~~~g~--~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~-Dvs~~~sv~~~~~~~~~~~   79 (275)
T d1wmaa1           3 IHVALVTGGNKGIGLAIVRDLCRLFSG--DVVLTARDVTRGQAAVQQLQAEGLSPRFHQL-DIDDLQSIRALRDFLRKEY   79 (275)
T ss_dssp             CCEEEESSCSSHHHHHHHHHHHHHSSS--EEEEEESSHHHHHHHHHHHHHTTCCCEEEEC-CTTCHHHHHHHHHHHHHHH
T ss_pred             CeEEEECCCCCHHHHHHHHHHHHhCCC--EEEEEECCHHHHHHHHHHHHhcCCcEEEEEE-ecCCHHHHHHHHHHHHHhc
Confidence            5785 6799999999999998864 66  899999987  33334455443222221111 11221          2335


Q ss_pred             CCCcEEEEcCCCCCCCC---CCHH---HHHHHHHHHHHHHHHHHhhhC-CCeEEEEecC
Q 018512          109 TGMDLVIIPAGVPRKPG---MTRD---DLFNINAGIVRTLCEGIAKCC-PNATVNLISN  160 (354)
Q Consensus       109 ~~aDvVIi~ag~~~~~g---~~r~---d~~~~n~~~~~~i~~~i~~~~-p~a~viv~tN  160 (354)
                      ..-|++|..||......   .+..   ..+.-|+.....+.+.+-..- +.+.|++++.
T Consensus        80 g~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~g~ivnisS  138 (275)
T d1wmaa1          80 GGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSS  138 (275)
T ss_dssp             SSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECC
T ss_pred             CCcEEEEEcCCcCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccc
Confidence            68999999999753221   1122   234556655555555554433 3567777764

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=95.50  E-value=0.1  Score=44.56  Aligned_cols=153  Identities=18%  Similarity=0.188  Sum_probs=86.7

Q ss_pred             eEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC---chhHHHHHhcCCCCCeEEEEe-CCCcH----------HhhhC
Q 018512           44 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN---TPGVTADISHMDTGAVVRGFL-GQPQL----------ENALT  109 (354)
Q Consensus        44 kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~---~~g~~~dl~~~~~~~~v~~~~-~~~d~----------~~al~  109 (354)
                      =|.|+||++.+|..++..|+..|.  .|++.|.+.   .+....++....  ..+..+. +-+|.          .+.+.
T Consensus         3 V~lITGas~GIG~a~a~~la~~Ga--~V~i~~~~~~~~~~~~~~~~~~~g--~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   78 (244)
T d1edoa_           3 VVVVTGASRGIGKAIALSLGKAGC--KVLVNYARSAKAAEEVSKQIEAYG--GQAITFGGDVSKEADVEAMMKTAIDAWG   78 (244)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTC--EEEEEESSCHHHHHHHHHHHHHHT--CEEEEEECCTTSHHHHHHHHHHHHHHSS
T ss_pred             EEEEeCCCcHHHHHHHHHHHHCCC--EEEEEeCCCHHHHHHHHHHHHHcC--CcEEEEeCCCCCHHHHHHHHHHHHHHcC
Confidence            367789999999999999999998  888887755   222233333221  1222221 11221          23346


Q ss_pred             CCcEEEEcCCCCCCCC---CCH---HHHHHHH----HHHHHHHHHHHhhhCCCeEEEEecCCCCCchHHHHHHHHHhCCC
Q 018512          110 GMDLVIIPAGVPRKPG---MTR---DDLFNIN----AGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTY  179 (354)
Q Consensus       110 ~aDvVIi~ag~~~~~g---~~r---~d~~~~n----~~~~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~~~~~~~~~~  179 (354)
                      .-|++|..||......   .+.   ...+.-|    +...+..++.|++. ..+.||++|.-..          .+  +.
T Consensus        79 ~iDiLVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~-~~G~IVnisS~~~----------~~--~~  145 (244)
T d1edoa_          79 TIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKK-RKGRIINIASVVG----------LI--GN  145 (244)
T ss_dssp             CCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCTHH----------HH--CC
T ss_pred             CCCccccccccccccchhccchHHHHHHHhhhhhhHHHHHHHHHHHHHHc-CCcEEEEEcChhh----------cC--CC
Confidence            7899999998654321   222   2233444    45566667777654 4677777754211          11  33


Q ss_pred             CCCCEEEeccchHHHHHHHHHHHhCCCCCCCcceEE
Q 018512          180 DPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVV  215 (354)
Q Consensus       180 p~~kviG~t~ld~~r~~~~la~~l~v~~~~v~~~v~  215 (354)
                      |..-.++.+.-.-..|.+.+|..++  +..|++-.+
T Consensus       146 ~~~~~Y~asKaal~~ltk~lA~el~--~~gIrvN~I  179 (244)
T d1edoa_         146 IGQANYAAAKAGVIGFSKTAAREGA--SRNINVNVV  179 (244)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHHH--TTTEEEEEE
T ss_pred             CCCHHHHHHHHHHHHChHHHHHHHh--hhCcEEEEE
Confidence            3333344444344567788888874  455554444

>d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-2-hydroxyisocaproate dehydrogenase
species: Lactobacillus casei [TaxId: 1582]

Probab=95.39  E-value=0.012  Score=49.38  Aligned_cols=91  Identities=21%  Similarity=0.197  Sum_probs=58.9

Q ss_pred             CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcCCC
Q 018512           41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGV  120 (354)
Q Consensus        41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~ag~  120 (354)
                      ..++|+|+|. |.+|+.++..+..=|.  +|+.||.....+         .......    .++++.++.||+|++....
T Consensus        44 ~~ktvgIiG~-G~IG~~va~~l~~fg~--~v~~~d~~~~~~---------~~~~~~~----~~l~~l~~~~D~v~~~~pl  107 (199)
T d1dxya1          44 GQQTVGVMGT-GHIGQVAIKLFKGFGA--KVIAYDPYPMKG---------DHPDFDY----VSLEDLFKQSDVIDLHVPG  107 (199)
T ss_dssp             GGSEEEEECC-SHHHHHHHHHHHHTTC--EEEEECSSCCSS---------CCTTCEE----CCHHHHHHHCSEEEECCCC
T ss_pred             cceeeeeeec-ccccccccccccccce--eeeccCCccchh---------hhcchhH----HHHHHHHHhcccceeeecc
Confidence            3469999999 9999999999986666  999999864210         0111221    2577889999999997432


Q ss_pred             C-CCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCC
Q 018512          121 P-RKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNP  161 (354)
Q Consensus       121 ~-~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNP  161 (354)
                      . ...++-       |    .   +.+....+++++||++=.
T Consensus       108 t~~T~~li-------~----~---~~l~~mk~~a~lIN~aRG  135 (199)
T d1dxya1         108 IEQNTHII-------N----E---AAFNLMKPGAIVINTARP  135 (199)
T ss_dssp             CGGGTTSB-------C----H---HHHHHSCTTEEEEECSCT
T ss_pred             cccccccc-------c----H---HHhhccCCceEEEecccH
Confidence            1 111111       1    1   222233578999999743

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.33  E-value=0.13  Score=44.08  Aligned_cols=114  Identities=18%  Similarity=0.136  Sum_probs=61.5

Q ss_pred             eEEEE-cCCCchHHHHHHHHHh---CCCCcEEEEEecCC--chhHHHHHhcCCCCCeEEEEeC-CCcH---Hhhh-----
Q 018512           44 KVAIL-GAAGGIGQPLAMLMKI---NPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLG-QPQL---ENAL-----  108 (354)
Q Consensus        44 kI~Ii-Ga~G~vG~~~a~~l~~---~~~~~ei~L~D~~~--~~g~~~dl~~~~~~~~v~~~~~-~~d~---~~al-----  108 (354)
                      ||+|| ||++.+|..+|..|+.   .|.  .|++.|+++  ++....++........+..+.. -++.   ++.+     
T Consensus         7 KvalITGas~GIG~aiA~~lA~~~~~G~--~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~l~~~~~~   84 (259)
T d1oaaa_           7 AVCVLTGASRGFGRALAPQLARLLSPGS--VMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAVRE   84 (259)
T ss_dssp             EEEEESSCSSHHHHHHHHHHHTTBCTTC--EEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHhcccCCC--EEEEEECCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHH
Confidence            56555 9988999999999986   455  999999976  3334445543222233433322 1222   1111     


Q ss_pred             ------CCCcEEEEcCCCCCC--CC----CC---HHHHHHHHHHHHHHHHH----HHhhhC-CCeEEEEec
Q 018512          109 ------TGMDLVIIPAGVPRK--PG----MT---RDDLFNINAGIVRTLCE----GIAKCC-PNATVNLIS  159 (354)
Q Consensus       109 ------~~aDvVIi~ag~~~~--~g----~~---r~d~~~~n~~~~~~i~~----~i~~~~-p~a~viv~t  159 (354)
                            -+.|++|..||....  .+    .+   ....+.-|+.....+.+    .+++.. +.+.|+++|
T Consensus        85 ~~~~~~~~~~~lvnnag~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~~~~~g~Iv~is  155 (259)
T d1oaaa_          85 LPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNIS  155 (259)
T ss_dssp             SCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEEC
T ss_pred             hhhhccCceEEEEecccccccCCCCccccCCHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCCCcccccccc
Confidence                  245677777775321  11    22   22345556555444444    444332 245666665

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

Probab=95.30  E-value=0.017  Score=49.84  Aligned_cols=36  Identities=17%  Similarity=0.140  Sum_probs=31.2

Q ss_pred             CCCeEEEEcCCCc--hHHHHHHHHHhCCCCcEEEEEecCC
Q 018512           41 AGFKVAILGAAGG--IGQPLAMLMKINPLVSVLHLYDVVN   78 (354)
Q Consensus        41 ~~~kI~IiGa~G~--vG~~~a~~l~~~~~~~ei~L~D~~~   78 (354)
                      +.+++.|+||+|.  +|.++|..|+..|.  +|+|.+.+.
T Consensus         5 ~gK~~lItGaag~~GIG~aiA~~la~~Ga--~Vil~~~~~   42 (268)
T d2h7ma1           5 DGKRILVSGIITDSSIAFHIARVAQEQGA--QLVLTGFDR   42 (268)
T ss_dssp             TTCEEEECCCSSTTCHHHHHHHHHHHTTC--EEEEEECSC
T ss_pred             CCCEEEEECCCCCCHHHHHHHHHHHHcCC--EEEEEeCCh
Confidence            4568999997664  99999999999998  899999876

>d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Myxococcus xanthus [TaxId: 34]

Probab=95.30  E-value=0.0061  Score=52.08  Aligned_cols=33  Identities=21%  Similarity=0.266  Sum_probs=30.6

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   78 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~   78 (354)
                      |||+|||| |..|.+.|..|.+.|+  +|+|++..+
T Consensus         1 m~V~IIGa-G~aGL~aA~~L~~~G~--~V~vlE~~~   33 (347)
T d2ivda1           1 MNVAVVGG-GISGLAVAHHLRSRGT--DAVLLESSA   33 (347)
T ss_dssp             CCEEEECC-BHHHHHHHHHHHTTTC--CEEEECSSS
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCC--CEEEEecCC
Confidence            79999999 9999999999999998  899999864

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.25  E-value=0.11  Score=41.54  Aligned_cols=97  Identities=18%  Similarity=0.184  Sum_probs=58.0

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc-hhHHHHHhcCCCCCeEEEEeCCCcHHhhh--------CCCc
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT-PGVTADISHMDTGAVVRGFLGQPQLENAL--------TGMD  112 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~-~g~~~dl~~~~~~~~v~~~~~~~d~~~al--------~~aD  112 (354)
                      .-+|+|+|+ |.+|...+..+...|. ..|+..|.++. ...+.++   .. ..+... ...+..+..        .++|
T Consensus        27 gd~VlI~G~-G~iG~~~~~~a~~~G~-~~Vi~~d~~~~rl~~a~~~---Ga-~~~~~~-~~~~~~~~~~~~~~~~g~g~D   99 (171)
T d1pl8a2          27 GHKVLVCGA-GPIGMVTLLVAKAMGA-AQVVVTDLSATRLSKAKEI---GA-DLVLQI-SKESPQEIARKVEGQLGCKPE   99 (171)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTC-SEEEEEESCHHHHHHHHHT---TC-SEEEEC-SSCCHHHHHHHHHHHHTSCCS
T ss_pred             CCEEEEECC-CccHHHHHHHHHHcCC-ceEEeccCCHHHHHHHHHh---CC-cccccc-cccccccccccccccCCCCce
Confidence            348999998 9999999988888775 37999999762 2223322   21 112211 223332222        4799


Q ss_pred             EEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCC
Q 018512          113 LVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVN  163 (354)
Q Consensus       113 vVIi~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv~  163 (354)
                      +||.+.|.+               ..+....+.   ..|.+.+++++.|.+
T Consensus       100 vvid~~G~~---------------~~~~~a~~~---~~~gG~iv~~G~~~~  132 (171)
T d1pl8a2         100 VTIECTGAE---------------ASIQAGIYA---TRSGGTLVLVGLGSE  132 (171)
T ss_dssp             EEEECSCCH---------------HHHHHHHHH---SCTTCEEEECSCCCS
T ss_pred             EEEeccCCc---------------hhHHHHHHH---hcCCCEEEEEecCCC
Confidence            999987633               122222222   247888888875543

>d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Dihydroxypyridine hydroxylase DhpH
species: Arthrobacter nicotinovorans [TaxId: 29320]

Probab=95.24  E-value=0.0094  Score=50.84  Aligned_cols=34  Identities=15%  Similarity=0.295  Sum_probs=30.9

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   78 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~   78 (354)
                      ..||+|||| |..|.++|..|...|+  +++++|..+
T Consensus         4 ~~kV~IiGa-G~aGl~~A~~L~~~G~--~v~v~Er~~   37 (265)
T d2voua1           4 TDRIAVVGG-SISGLTAALMLRDAGV--DVDVYERSP   37 (265)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTC--EEEEECSSS
T ss_pred             CCcEEEECc-CHHHHHHHHHHHHCCC--CEEEEeCCC
Confidence            469999999 9999999999999998  999999753

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=95.19  E-value=0.052  Score=43.54  Aligned_cols=99  Identities=16%  Similarity=0.276  Sum_probs=58.1

Q ss_pred             CCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc-hhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcC
Q 018512           40 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT-PGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA  118 (354)
Q Consensus        40 ~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~-~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~a  118 (354)
                      .+..+|+|+|+ |.+|...++.+...|.  +++.+|.++. ...+.++.   ....+. ...........++.|+||.+.
T Consensus        29 ~~G~~VlI~Ga-G~vG~~a~qlak~~Ga--~~i~~~~~~~~~~~a~~lG---ad~~i~-~~~~~~~~~~~~~~D~vid~~  101 (168)
T d1uufa2          29 GPGKKVGVVGI-GGLGHMGIKLAHAMGA--HVVAFTTSEAKREAAKALG---ADEVVN-SRNADEMAAHLKSFDFILNTV  101 (168)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTC--EEEEEESSGGGHHHHHHHT---CSEEEE-TTCHHHHHTTTTCEEEEEECC
T ss_pred             CCCCEEEEecc-chHHHHHHHHhhcccc--cchhhccchhHHHHHhccC---CcEEEE-CchhhHHHHhcCCCceeeeee
Confidence            34568999998 9999999988888886  6677887662 22333332   111111 111111233447899999987


Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCC
Q 018512          119 GVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVN  163 (354)
Q Consensus       119 g~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv~  163 (354)
                      |.+..               +   -..++-..|.+.+++++.|.+
T Consensus       102 g~~~~---------------~---~~~~~~l~~~G~iv~~G~~~~  128 (168)
T d1uufa2         102 AAPHN---------------L---DDFTTLLKRDGTMTLVGAPAT  128 (168)
T ss_dssp             SSCCC---------------H---HHHHTTEEEEEEEEECCCC--
T ss_pred             ecchh---------------H---HHHHHHHhcCCEEEEeccCCC
Confidence            65421               1   122233457888888876544

>d1w5fa1 c.32.1.1 (A:22-215) Cell-division protein FtsZ {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: Tubulin nucleotide-binding domain-like
superfamily: Tubulin nucleotide-binding domain-like
family: Tubulin, GTPase domain
domain: Cell-division protein FtsZ
species: Thermotoga maritima [TaxId: 2336]

Probab=95.12  E-value=0.024  Score=47.28  Aligned_cols=90  Identities=13%  Similarity=0.183  Sum_probs=55.5

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCC-CcEEEEEecCCchhHHHHHhcCCCCCeEEEE---------------------eC
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPL-VSVLHLYDVVNTPGVTADISHMDTGAVVRGF---------------------LG  100 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~-~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~---------------------~~  100 (354)
                      +||.|||. |..|.+++..+...++ ..+.+.+|.|.     .+|.+.....++..-                     ..
T Consensus         1 ~kI~viGv-GGaG~n~v~~l~~~~~~~v~~iainTD~-----~~L~~~~a~~ki~iG~~~t~G~G~g~~p~~g~~aa~e~   74 (194)
T d1w5fa1           1 LKIKVIGV-GGAGNNAINRMIEIGIHGVEFVAVNTDL-----QVLEASNADVKIQIGENITRGLGAGGRPEIGEQAALES   74 (194)
T ss_dssp             CCEEEEEE-HHHHHHHHHHHHHHCCTTEEEEEEESCH-----HHHHTCCCSEEEECCTTTTTTSCCTTCHHHHHHHHHHT
T ss_pred             CeEEEEEe-CchHHHHHHHHHHcCCCceEEEEEcCCH-----HHHhcCCcceEEecccccCCCcccccCchhhHhHHHHH
Confidence            58999999 9999999998877664 34888888874     223332211111110                     00


Q ss_pred             CCcHHhhhCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHH
Q 018512          101 QPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEG  145 (354)
Q Consensus       101 ~~d~~~al~~aDvVIi~ag~~~~~g~~r~d~~~~n~~~~~~i~~~  145 (354)
                      .....+.+.++|+||++||.....|       .-=.|++.++++.
T Consensus        75 ~~~I~~~l~~~d~vfi~AGlGGgTG-------tgaapviA~~ake  112 (194)
T d1w5fa1          75 EEKIREVLQDTHMVFITAGFGGGTG-------TGASPVIAKIAKE  112 (194)
T ss_dssp             HHHHHHHTTTCSEEEEEEETTSSHH-------HHHHHHHHHHHHH
T ss_pred             HHHHHHHhcCCCeEEEEEecCCCcc-------cchHHHHHHHHHH
Confidence            1134677899999999988764322       2224555555555

>d1nhpa1 c.3.1.5 (A:1-119,A:243-321) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=95.10  E-value=0.0093  Score=49.27  Aligned_cols=35  Identities=17%  Similarity=0.135  Sum_probs=30.3

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   78 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~   78 (354)
                      |||+|||| |++|..+|..|...+...+|.+++...
T Consensus         1 ~KVvIIGg-G~~G~e~A~~l~~~~~~~~V~v~~~~~   35 (198)
T d1nhpa1           1 MKVIVLGS-SHGGYEAVEELLNLHPDAEIQWYEKGD   35 (198)
T ss_dssp             CEEEEECS-SHHHHHHHHHHHHHCTTSEEEEEESSS
T ss_pred             CEEEEECC-cHHHHHHHHHHHhcCCCCeEEEEeCCC
Confidence            89999999 999999999998766555999998754

>d1tlta1 c.2.1.3 (A:5-127,A:268-308) Virulence factor MviM {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Virulence factor MviM
species: Escherichia coli [TaxId: 562]

Probab=95.10  E-value=0.034  Score=44.49  Aligned_cols=66  Identities=12%  Similarity=0.232  Sum_probs=42.6

Q ss_pred             CCeEEEEcCCCchHHH-HHHHHHhCCCCcEEEEEecCCchh--HHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcC
Q 018512           42 GFKVAILGAAGGIGQP-LAMLMKINPLVSVLHLYDVVNTPG--VTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA  118 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~-~a~~l~~~~~~~ei~L~D~~~~~g--~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~a  118 (354)
                      ++||+|||+ |++|.. .+..+...+...-+.++|.++...  ...++. .   +   .   .+++++.+++.|+|+++.
T Consensus         1 Kiri~iIG~-G~~g~~~~~~~l~~~~~~~i~~v~d~~~~~~~~~~~~~~-~---~---~---~~~~~~l~~~~D~V~I~t   69 (164)
T d1tlta1           1 KLRIGVVGL-GGIAQKAWLPVLAAASDWTLQGAWSPTRAKALPICESWR-I---P---Y---ADSLSSLAASCDAVFVHS   69 (164)
T ss_dssp             CEEEEEECC-STHHHHTHHHHHHSCSSEEEEEEECSSCTTHHHHHHHHT-C---C---B---CSSHHHHHTTCSEEEECS
T ss_pred             CCEEEEEcC-CHHHHHHHHHHHHhCCCcEEEEEEechhHhhhhhhhccc-c---c---c---cccchhhhhhcccccccc
Confidence            379999998 999986 566666554443456889877322  222221 1   1   1   235667679999999873

>d1pj3a1 c.2.1.7 (A:280-573) Mitochondrial NAD(P)-dependent malic enzyme {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Mitochondrial NAD(P)-dependent malic enzyme
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.10  E-value=0.0034  Score=56.03  Aligned_cols=108  Identities=21%  Similarity=0.235  Sum_probs=66.0

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHh----CCCC-----cEEEEEecCC--chhHHHHHhcCC-CCCeEEEEeCCCcHHhhhC
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKI----NPLV-----SVLHLYDVVN--TPGVTADISHMD-TGAVVRGFLGQPQLENALT  109 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~----~~~~-----~ei~L~D~~~--~~g~~~dl~~~~-~~~~v~~~~~~~d~~~al~  109 (354)
                      ..||+|.|| |..|..++.+|..    .|+.     +.++++|.+.  .++...++.... .+..-.......++.++++
T Consensus        25 d~kiv~~GA-GsAg~gia~ll~~~~~~~g~~~~~a~~~i~lvD~~Glv~~~r~~~~~~~k~~~a~~~~~~~~~~L~e~i~  103 (294)
T d1pj3a1          25 EHKILFLGA-GEAALGIANLIVMSMVENGLSEQEAQKKIWMFDKYGLLVKGRKAKIDSYQEPFTHSAPESIPDTFEDAVN  103 (294)
T ss_dssp             GCCEEEECC-SHHHHHHHHHHHHHHHHTTCCHHHHHHTEEEEETTEECBTTCSSCCCTTTGGGCBCCCSSCCSSHHHHHH
T ss_pred             HcEEEEECc-cHHHHHHHHHHHHHHHhcCCchhhccccEEEEeCCCCccCCCCcccHHHHHHhhccccccchhHHHHHHH
Confidence            458999999 9999999887643    3432     4699999865  121111111110 0000000011235777765


Q ss_pred             --CCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCC
Q 018512          110 --GMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNS  164 (354)
Q Consensus       110 --~aDvVIi~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv~~  164 (354)
                        +.|++|-+.+.+.-              +.+++.+.|.+.+++.+|+-.|||..-
T Consensus       104 ~~kptvliG~S~~~g~--------------ft~evi~~Ma~~~~~PIIFaLSNPt~~  146 (294)
T d1pj3a1         104 ILKPSTIIGVAGAGRL--------------FTPDVIRAMASINERPVIFALSNPTAQ  146 (294)
T ss_dssp             HHCCSEEEECCCSSCC--------------SCHHHHHHHHHHCSSCEEEECCSSGGG
T ss_pred             hcCCceEEEecCCCCc--------------CCHHHHHHHHhcCCCcEEEEccCCCCc
Confidence              88888887654421              224666777788999999999999753

>d2i76a2 c.2.1.6 (A:2-154) Hypothetical protein TM1727 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM1727
species: Thermotoga maritima [TaxId: 2336]

Probab=95.05  E-value=0.0022  Score=51.19  Aligned_cols=62  Identities=11%  Similarity=0.101  Sum_probs=34.8

Q ss_pred             EEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcC
Q 018512           45 VAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA  118 (354)
Q Consensus        45 I~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~a  118 (354)
                      |.+||+ |++|++++..|...+.  ...+++++..  ...++.+.....       ..+..++++.+|+||++.
T Consensus         2 IgfIG~-G~mg~~l~~~L~~~~~--~~~v~~R~~~--~~~~l~~~~~~~-------~~~~~~~~~~~DiVil~v   63 (153)
T d2i76a2           2 LNFVGT-GTLTRFFLECLKDRYE--IGYILSRSID--RARNLAEVYGGK-------AATLEKHPELNGVVFVIV   63 (153)
T ss_dssp             CEEESC-CHHHHHHHHTTC------CCCEECSSHH--HHHHHHHHTCCC-------CCSSCCCCC---CEEECS
T ss_pred             EEEEeC-cHHHHHHHHHHHhCCC--EEEEEeCChh--hhcchhhccccc-------ccchhhhhccCcEEEEec
Confidence            689999 9999999987755443  2346887642  223333322100       112357789999999985

>d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Haemophilus influenzae [TaxId: 727]

Probab=95.03  E-value=0.076  Score=38.87  Aligned_cols=72  Identities=18%  Similarity=0.367  Sum_probs=50.4

Q ss_pred             CCCeEEEEcCCCchH-HHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcCC
Q 018512           41 AGFKVAILGAAGGIG-QPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG  119 (354)
Q Consensus        41 ~~~kI~IiGa~G~vG-~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~ag  119 (354)
                      +.+||-+||- |-.| +++|..|...|+  +|...|.... ....+|.+..  ..+.  ... + ++.++++|+||.+.+
T Consensus         7 ~~~~ihfiGi-gG~GMs~LA~~L~~~G~--~VsGSD~~~~-~~~~~L~~~G--i~v~--~g~-~-~~~i~~~d~vV~S~A   76 (96)
T d1p3da1           7 RVQQIHFIGI-GGAGMSGIAEILLNEGY--QISGSDIADG-VVTQRLAQAG--AKIY--IGH-A-EEHIEGASVVVVSSA   76 (96)
T ss_dssp             TCCEEEEETT-TSTTHHHHHHHHHHHTC--EEEEEESCCS-HHHHHHHHTT--CEEE--ESC-C-GGGGTTCSEEEECTT
T ss_pred             hCCEEEEEEE-CHHHHHHHHHHHHhCCC--EEEEEeCCCC-hhhhHHHHCC--CeEE--ECC-c-cccCCCCCEEEECCC
Confidence            3469999999 6677 567999999999  9999998752 2334455443  2333  222 2 456899999999987


Q ss_pred             CCC
Q 018512          120 VPR  122 (354)
Q Consensus       120 ~~~  122 (354)
                      .+.
T Consensus        77 I~~   79 (96)
T d1p3da1          77 IKD   79 (96)
T ss_dssp             SCT
T ss_pred             cCC
Confidence            774

>d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Thermotoga maritima [TaxId: 2336]

Probab=95.01  E-value=0.069  Score=38.61  Aligned_cols=70  Identities=24%  Similarity=0.298  Sum_probs=49.9

Q ss_pred             CeEEEEcCCCchHH-HHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcCCCC
Q 018512           43 FKVAILGAAGGIGQ-PLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVP  121 (354)
Q Consensus        43 ~kI~IiGa~G~vG~-~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~ag~~  121 (354)
                      |||-+||- |-+|. ++|..|...|+  .|.-.|..... ....|+....  .+  +.+. + .+.++++|+||.+.+.+
T Consensus         2 ~~ihfiGI-gG~GMs~LA~~L~~~G~--~VsGSD~~~~~-~t~~L~~~Gi--~i--~~gh-~-~~~i~~~d~vV~SsAI~   71 (89)
T d1j6ua1           2 MKIHFVGI-GGIGMSAVALHEFSNGN--DVYGSNIEETE-RTAYLRKLGI--PI--FVPH-S-ADNWYDPDLVIKTPAVR   71 (89)
T ss_dssp             CEEEEETT-TSHHHHHHHHHHHHTTC--EEEEECSSCCH-HHHHHHHTTC--CE--ESSC-C-TTSCCCCSEEEECTTCC
T ss_pred             cEEEEEeE-CHHHHHHHHHHHHhCCC--eEEEEeCCCCh-hHHHHHHCCC--eE--Eeee-c-ccccCCCCEEEEecCcC
Confidence            79999999 76776 57889999999  99999987522 2334665542  22  2222 2 35689999999998776


Q ss_pred             C
Q 018512          122 R  122 (354)
Q Consensus       122 ~  122 (354)
                      .
T Consensus        72 ~   72 (89)
T d1j6ua1          72 D   72 (89)
T ss_dssp             T
T ss_pred             C
Confidence            3

>d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Tobacco (Nicotiana tabacum) [TaxId: 4097]

Probab=94.93  E-value=0.012  Score=49.95  Aligned_cols=33  Identities=30%  Similarity=0.475  Sum_probs=30.3

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   78 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~   78 (354)
                      +||+|||| |..|.+.|..|.+.|+  +|+++|..+
T Consensus         2 KkV~IIGa-G~aGL~aA~~La~~G~--~V~vlE~~~   34 (373)
T d1seza1           2 KRVAVIGA-GVSGLAAAYKLKIHGL--NVTVFEAEG   34 (373)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHTTSC--EEEEECSSS
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCC--CEEEEeCCC
Confidence            59999999 9999999999999998  999999754

>d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=94.92  E-value=0.056  Score=44.51  Aligned_cols=91  Identities=23%  Similarity=0.271  Sum_probs=60.1

Q ss_pred             CCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcCC
Q 018512           40 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG  119 (354)
Q Consensus        40 ~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~ag  119 (354)
                      -..++|.|+|. |.+|..++..+..-+.  +|..+|.....      .. .  . ...   ..++++.++.||+|++...
T Consensus        42 l~~~~vgiiG~-G~IG~~va~~l~~fg~--~v~~~d~~~~~------~~-~--~-~~~---~~~l~ell~~sDii~i~~p  105 (188)
T d1sc6a1          42 ARGKKLGIIGY-GHIGTQLGILAESLGM--YVYFYDIENKL------PL-G--N-ATQ---VQHLSDLLNMSDVVSLHVP  105 (188)
T ss_dssp             STTCEEEEECC-SHHHHHHHHHHHHTTC--EEEEECSSCCC------CC-T--T-CEE---CSCHHHHHHHCSEEEECCC
T ss_pred             ccceEEEEeec-ccchhhhhhhcccccc--eEeeccccccc------hh-h--h-hhh---hhhHHHHHhhccceeeccc
Confidence            35579999999 9999999998876666  99999986421      00 0  1 111   2367899999999999754


Q ss_pred             CCC-CCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecC
Q 018512          120 VPR-KPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISN  160 (354)
Q Consensus       120 ~~~-~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tN  160 (354)
                      ... ..++-..           +   .++...+++++|+++-
T Consensus       106 lt~~T~~li~~-----------~---~l~~mk~~a~lIN~aR  133 (188)
T d1sc6a1         106 ENPSTKNMMGA-----------K---EISLMKPGSLLINASR  133 (188)
T ss_dssp             SSTTTTTCBCH-----------H---HHHHSCTTEEEEECSC
T ss_pred             CCcchhhhccH-----------H---HHhhCCCCCEEEEcCc
Confidence            332 1122111           1   2233457899999973

>d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 2
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=94.89  E-value=0.01  Score=48.39  Aligned_cols=35  Identities=20%  Similarity=0.283  Sum_probs=30.9

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   78 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~   78 (354)
                      +.||+|||| |..|...|..|.+.|+- +|.++|...
T Consensus         4 ~~kVaIIGa-GpaGl~aA~~l~~~G~~-~V~v~E~~~   38 (196)
T d1gtea4           4 SAKIALLGA-GPASISCASFLARLGYS-DITIFEKQE   38 (196)
T ss_dssp             GCCEEEECC-SHHHHHHHHHHHHTTCC-CEEEEESSS
T ss_pred             CCEEEEECC-hHHHHHHHHHHHHCCCC-eEEEEEecC
Confidence            359999999 99999999999999872 589999876

>d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit
species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]

Probab=94.83  E-value=0.013  Score=46.56  Aligned_cols=35  Identities=23%  Similarity=0.262  Sum_probs=30.7

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   78 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~   78 (354)
                      +||+|||| |++|..+|..|...+...+|+|+|.++
T Consensus         3 krivIvGg-G~~G~e~A~~l~~~~~~~~Vtlie~~~   37 (186)
T d1fcda1           3 RKVVVVGG-GTGGATAAKYIKLADPSIEVTLIEPNT   37 (186)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHCTTSEEEEECSCS
T ss_pred             CcEEEECc-cHHHHHHHHHHHHcCCCCcEEEEECCC
Confidence            59999999 999999999998877555999999876

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=94.82  E-value=0.12  Score=41.03  Aligned_cols=98  Identities=14%  Similarity=0.069  Sum_probs=58.3

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc-hhHHHHHhcCCCCCeEEEEeCCCcHH---hhh-----CCCc
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT-PGVTADISHMDTGAVVRGFLGQPQLE---NAL-----TGMD  112 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~-~g~~~dl~~~~~~~~v~~~~~~~d~~---~al-----~~aD  112 (354)
                      ..+|+|+|+ |.+|...++.+...|.  +|+.+|.++. ...+.++.   ....+.......+..   +.+     .++|
T Consensus        27 g~~vlV~G~-G~vG~~~~~~ak~~Ga--~vi~v~~~~~r~~~a~~~g---a~~~~~~~~~~~~~~~~~~~~~~~~g~g~D  100 (170)
T d1e3ja2          27 GTTVLVIGA-GPIGLVSVLAAKAYGA--FVVCTARSPRRLEVAKNCG---ADVTLVVDPAKEEESSIIERIRSAIGDLPN  100 (170)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHTT---CSEEEECCTTTSCHHHHHHHHHHHSSSCCS
T ss_pred             CCEEEEEcc-cccchhhHhhHhhhcc--cccccchHHHHHHHHHHcC---CcEEEeccccccccchhhhhhhcccccCCc
Confidence            348999997 9999999998888886  8999999762 22333332   111111111111211   111     5699


Q ss_pred             EEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCC
Q 018512          113 LVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVN  163 (354)
Q Consensus       113 vVIi~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv~  163 (354)
                      +||.++|.+               ..+...   ++-..|.+.+++++.|.+
T Consensus       101 ~vid~~g~~---------------~~~~~a---~~~~~~~G~iv~~G~~~~  133 (170)
T d1e3ja2         101 VTIDCSGNE---------------KCITIG---INITRTGGTLMLVGMGSQ  133 (170)
T ss_dssp             EEEECSCCH---------------HHHHHH---HHHSCTTCEEEECSCCSS
T ss_pred             eeeecCCCh---------------HHHHHH---HHHHhcCCceEEEecCCC
Confidence            999987643               112222   233358899988876644

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.78  E-value=0.39  Score=40.42  Aligned_cols=154  Identities=14%  Similarity=0.125  Sum_probs=82.9

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCCCCeEEEEeCCCc----------HHhhhC
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLGQPQ----------LENALT  109 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~~~~v~~~~~~~d----------~~~al~  109 (354)
                      .+.+.|+||++.+|.+++..|+..|.  .|++.|+++  ++....++....  .....  ...+          ......
T Consensus         5 GKvalITGas~GIG~aia~~la~~G~--~V~~~~r~~~~~~~~~~~l~~~~--~~~~~--~~~~~~~~~~~~~~~~~~~~   78 (248)
T d2o23a1           5 GLVAVITGGASGLGLATAERLVGQGA--SAVLLDLPNSGGEAQAKKLGNNC--VFAPA--DVTSEKDVQTALALAKGKFG   78 (248)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEECTTSSHHHHHHHHCTTE--EEEEC--CTTCHHHHHHHHHHHHHHHS
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCC--EEEEEeCChHHHHHHHHHhCCCc--ccccc--cccccccccccccccccccc
Confidence            44678999999999999999999998  899999987  333444443221  00110  0111          123346


Q ss_pred             CCcEEEEcCCCCCCCC---------CC---HHHHHHHHHHH----HHHHHHHHhhhC-----CCeEEEEecCCCCCchHH
Q 018512          110 GMDLVIIPAGVPRKPG---------MT---RDDLFNINAGI----VRTLCEGIAKCC-----PNATVNLISNPVNSTVPI  168 (354)
Q Consensus       110 ~aDvVIi~ag~~~~~g---------~~---r~d~~~~n~~~----~~~i~~~i~~~~-----p~a~viv~tNPv~~~~~~  168 (354)
                      ..|+++..++.....+         .+   ....+..|+..    .+.+.+.+....     ..+.||++|....     
T Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~-----  153 (248)
T d2o23a1          79 RVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAA-----  153 (248)
T ss_dssp             CCCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHH-----
T ss_pred             cccccccccccccCCCcccccccccchHHHHHHHHhHHHHHHHHHHHHhHHHHHHhhhhccCCceEEEEecchhh-----
Confidence            6788888665432111         11   22234445443    444455544332     3466777764221     


Q ss_pred             HHHHHHHhCCCCCCCEEEeccchHHHHHHHHHHHhCCCCCCCcceEE
Q 018512          169 AAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVV  215 (354)
Q Consensus       169 ~~~~~~~~~~~p~~kviG~t~ld~~r~~~~la~~l~v~~~~v~~~v~  215 (354)
                            +. +.|..=.++.+.-.-..|.+.+|..++  +..|++-.+
T Consensus       154 ------~~-~~~~~~~Y~asKaal~~lt~~la~e~~--~~gIrvN~I  191 (248)
T d2o23a1         154 ------FE-GQVGQAAYSASKGGIVGMTLPIARDLA--PIGIRVMTI  191 (248)
T ss_dssp             ------HH-CCTTCHHHHHHHHHHHHHHHHHHHHHG--GGTEEEEEE
T ss_pred             ------cc-CCCCchHHHHHHHHHHHHHHHHHHHhc--ccCcceeee
Confidence                  11 233222233333334457788888875  455544433

>d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Klebsiella pneumoniae [TaxId: 573]

Probab=94.77  E-value=0.015  Score=52.04  Aligned_cols=34  Identities=24%  Similarity=0.296  Sum_probs=31.4

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   78 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~   78 (354)
                      .+||+|||| |.-|.+.|..|.+.|+  +|.++|.+.
T Consensus         2 ~KKI~IIGa-G~sGL~aA~~L~k~G~--~V~viEk~~   35 (314)
T d2bi7a1           2 SKKILIVGA-GFSGAVIGRQLAEKGH--QVHIIDQRD   35 (314)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHTTTC--EEEEEESSS
T ss_pred             CCEEEEECC-cHHHHHHHHHHHhCCC--CEEEEECCC
Confidence            569999999 9999999999998887  999999876

>d1f06a1 c.2.1.3 (A:1-118,A:269-320) Diaminopimelic acid dehydrogenase (DAPDH) {Corynebacterium glutamicum [TaxId: 1718]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Diaminopimelic acid dehydrogenase (DAPDH)
species: Corynebacterium glutamicum [TaxId: 1718]

Probab=94.75  E-value=0.042  Score=44.43  Aligned_cols=66  Identities=21%  Similarity=0.411  Sum_probs=44.2

Q ss_pred             CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcCC
Q 018512           41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG  119 (354)
Q Consensus        41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~ag  119 (354)
                      +++||+|+|. |++|+..+..+...+-+.-+.++|.+...         ........   ..+..+...+.|+|+++..
T Consensus         2 ~kirvgiiG~-G~ig~~~~~~l~~~~~~elvav~~~~~~~---------~~~~~~~~---~~~~~~~~~~~D~Vvi~tp   67 (170)
T d1f06a1           2 TNIRVAIVGY-GNLGRSVEKLIAKQPDMDLVGIFSRRATL---------DTKTPVFD---VADVDKHADDVDVLFLCMG   67 (170)
T ss_dssp             CCEEEEEECC-SHHHHHHHHHHTTCSSEEEEEEEESSSCC---------SSSSCEEE---GGGGGGTTTTCSEEEECSC
T ss_pred             CcceEEEECC-hHHHHHHHHHHHhCCCcEEEEEEeccccc---------cccccccc---chhhhhhccccceEEEeCC
Confidence            4579999998 99999998888776544345577776421         11122222   2355677889999999753

>d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Putative shikimate dehydrogenase YdiB
species: Escherichia coli [TaxId: 562]

Probab=94.73  E-value=0.027  Score=46.15  Aligned_cols=76  Identities=21%  Similarity=0.261  Sum_probs=49.1

Q ss_pred             CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc-hh----HHHHHhcCCCCCeEEEEeC--CCcHHhhhCCCcE
Q 018512           41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT-PG----VTADISHMDTGAVVRGFLG--QPQLENALTGMDL  113 (354)
Q Consensus        41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~-~g----~~~dl~~~~~~~~v~~~~~--~~d~~~al~~aDv  113 (354)
                      +..+|+|+|+ |.+|.+++..|...+. .+|++++++.. ..    ...++... ....+.....  ..++.+.+..+|+
T Consensus        17 ~~k~vlIlGa-GGaarai~~al~~~g~-~~i~i~nR~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~di   93 (182)
T d1vi2a1          17 KGKTMVLLGA-GGASTAIGAQGAIEGL-KEIKLFNRRDEFFDKALAFAQRVNEN-TDCVVTVTDLADQQAFAEALASADI   93 (182)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTC-SEEEEEECSSTTHHHHHHHHHHHHHH-SSCEEEEEETTCHHHHHHHHHTCSE
T ss_pred             CCCEEEEECC-cHHHHHHHHHHhhcCC-ceEeeeccchHHHHHHHHHHHHHHhh-cCcceEeeecccccchhhhhcccce
Confidence            4469999999 9999999999988774 58999999862 11    22223221 1122222211  1234566789999


Q ss_pred             EEEcCC
Q 018512          114 VIIPAG  119 (354)
Q Consensus       114 VIi~ag  119 (354)
                      ||.+..
T Consensus        94 iIN~Tp   99 (182)
T d1vi2a1          94 LTNGTK   99 (182)
T ss_dssp             EEECSS
T ss_pred             eccccC
Confidence            999753

>d3c96a1 c.3.1.2 (A:4-182,A:294-402) Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Monooxygenase PhzS
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=94.73  E-value=0.016  Score=49.48  Aligned_cols=35  Identities=20%  Similarity=0.227  Sum_probs=30.9

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   78 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~   78 (354)
                      |+||+|||| |..|.++|..|.+.|+. .|.+++..+
T Consensus         1 ~~~V~IvGa-G~aGl~~A~~L~~~Gi~-~V~V~Er~~   35 (288)
T d3c96a1           1 PIDILIAGA-GIGGLSCALALHQAGIG-KVTLLESSS   35 (288)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCS-EEEEEESSS
T ss_pred             CCEEEEECc-CHHHHHHHHHHHhCCCC-eEEEEeCCC
Confidence            579999999 99999999999998843 788999865

>d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: 2,4-dienoyl-CoA reductase, middle domain
species: Escherichia coli [TaxId: 562]

Probab=94.69  E-value=0.019  Score=47.29  Aligned_cols=36  Identities=22%  Similarity=0.330  Sum_probs=32.5

Q ss_pred             CCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC
Q 018512           40 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   78 (354)
Q Consensus        40 ~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~   78 (354)
                      ..+.||+|||| |..|...|..|..+|+  +|.|||...
T Consensus        41 ~~~k~V~IIGa-GPAGL~AA~~la~~G~--~Vtl~E~~~   76 (179)
T d1ps9a3          41 VQKKNLAVVGA-GPAGLAFAINAAARGH--QVTLFDAHS   76 (179)
T ss_dssp             SSCCEEEEECC-SHHHHHHHHHHHTTTC--EEEEEESSS
T ss_pred             CCCcEEEEECc-cHHHHHHHHHHHhhcc--ceEEEeccC
Confidence            33569999999 9999999999999999  999999875

>d1ydwa1 c.2.1.3 (A:6-133,A:305-360) Probable oxidoreductase At4g09670 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Probable oxidoreductase At4g09670
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=94.61  E-value=0.044  Score=44.62  Aligned_cols=70  Identities=10%  Similarity=0.227  Sum_probs=43.4

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEE-EEecCCchhHHHHHhc-CCCCCeEEEEeCCCcHHhhh--CCCcEEEEc
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLH-LYDVVNTPGVTADISH-MDTGAVVRGFLGQPQLENAL--TGMDLVIIP  117 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~-L~D~~~~~g~~~dl~~-~~~~~~v~~~~~~~d~~~al--~~aDvVIi~  117 (354)
                      .+||+|||+ |.+|...+..+...+.. +|+ ++|+++..+.  ++.. .......+.+   +|+++.+  .+.|+|+++
T Consensus         1 kiki~iIG~-G~~g~~~~~~l~~~~~~-~i~ai~d~~~~~~~--~~~~~~~~~~~~~~~---~~~~~ll~~~~iD~v~I~   73 (184)
T d1ydwa1           1 QIRIGVMGC-ADIARKVSRAIHLAPNA-TISGVASRSLEKAK--AFATANNYPESTKIH---GSYESLLEDPEIDALYVP   73 (184)
T ss_dssp             CEEEEEESC-CTTHHHHHHHHHHCTTE-EEEEEECSSHHHHH--HHHHHTTCCTTCEEE---SSHHHHHHCTTCCEEEEC
T ss_pred             CeEEEEEcC-CHHHHHHHHHHHhCCCC-EEEEEEeCCccccc--cchhccccccceeec---CcHHHhhhccccceeeec
Confidence            369999998 99999998888766543 555 6788752221  1111 1111223333   3666655  568999987


Q ss_pred             C
Q 018512          118 A  118 (354)
Q Consensus       118 a  118 (354)
                      .
T Consensus        74 t   74 (184)
T d1ydwa1          74 L   74 (184)
T ss_dssp             C
T ss_pred             c
Confidence            3

>d1zh8a1 c.2.1.3 (A:4-131,A:276-328) Hypothetical protein TM0312 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM0312
species: Thermotoga maritima [TaxId: 2336]

Probab=94.59  E-value=0.1  Score=42.30  Aligned_cols=70  Identities=14%  Similarity=0.142  Sum_probs=41.3

Q ss_pred             CCCeEEEEcCCCchHHH-HHHHHHhCCCCcEEE-EEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhC--CCcEEEE
Q 018512           41 AGFKVAILGAAGGIGQP-LAMLMKINPLVSVLH-LYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALT--GMDLVII  116 (354)
Q Consensus        41 ~~~kI~IiGa~G~vG~~-~a~~l~~~~~~~ei~-L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~--~aDvVIi  116 (354)
                      +++||+|||+ |.+|.. .+..+...+...+|+ ++|.++...  ..+.+....+  ..+   +++++.++  +.|+|++
T Consensus         2 kkirigiIG~-G~~g~~~h~~~l~~~~~~~~i~~v~d~~~~~~--~~~~~~~~~~--~~~---~~~~ell~~~~id~v~I   73 (181)
T d1zh8a1           2 RKIRLGIVGC-GIAARELHLPALKNLSHLFEITAVTSRTRSHA--EEFAKMVGNP--AVF---DSYEELLESGLVDAVDL   73 (181)
T ss_dssp             CCEEEEEECC-SHHHHHTHHHHHHTTTTTEEEEEEECSSHHHH--HHHHHHHSSC--EEE---SCHHHHHHSSCCSEEEE
T ss_pred             CCcEEEEEcC-CHHHHHHHHHHHHhCCCCeEEEEEEeccHhhh--hhhhcccccc--cee---eeeeccccccccceeec
Confidence            4679999998 999987 466666544322554 788875222  1121110011  222   46777664  6898998


Q ss_pred             cC
Q 018512          117 PA  118 (354)
Q Consensus       117 ~a  118 (354)
                      +.
T Consensus        74 ~t   75 (181)
T d1zh8a1          74 TL   75 (181)
T ss_dssp             CC
T ss_pred             cc
Confidence            73

>d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.55  E-value=0.05  Score=43.98  Aligned_cols=95  Identities=15%  Similarity=0.124  Sum_probs=63.0

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcCCCC
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVP  121 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~ag~~  121 (354)
                      .++++|+|- |.+|..+|..+...+.  .|..+|+++.++... ..+. +  .+      ..+++++..+|+||.+.|..
T Consensus        24 Gk~v~V~Gy-G~iG~g~A~~~rg~G~--~V~v~e~dp~~al~A-~~dG-~--~v------~~~~~a~~~adivvtaTGn~   90 (163)
T d1li4a1          24 GKVAVVAGY-GDVGKGCAQALRGFGA--RVIITEIDPINALQA-AMEG-Y--EV------TTMDEACQEGNIFVTTTGCI   90 (163)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTC--EEEEECSCHHHHHHH-HHTT-C--EE------CCHHHHTTTCSEEEECSSCS
T ss_pred             CCEEEEecc-ccccHHHHHHHHhCCC--eeEeeecccchhHHh-hcCc-e--Ee------eehhhhhhhccEEEecCCCc
Confidence            458999998 9999999999998887  999999987433222 1221 1  11      23579999999999987644


Q ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec-CCCCCch
Q 018512          122 RKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS-NPVNSTV  166 (354)
Q Consensus       122 ~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~t-NPv~~~~  166 (354)
                      ..  .+               .+.+++..+.+++.+++ -...+-.
T Consensus        91 ~v--I~---------------~eh~~~MKdgaIL~N~Ghfd~EId~  119 (163)
T d1li4a1          91 DI--IL---------------GRHFEQMKDDAIVCNIGHFDVEIDV  119 (163)
T ss_dssp             CS--BC---------------HHHHTTCCTTEEEEECSSSTTSBCH
T ss_pred             cc--hh---------------HHHHHhccCCeEEEEeccccceecH
Confidence            21  11               12334444678888876 4444443

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=94.55  E-value=0.11  Score=44.37  Aligned_cols=113  Identities=16%  Similarity=0.098  Sum_probs=66.3

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC-----chhHHHHHhcCCCCCeEEEEeC-CCcH---Hh---hh--
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN-----TPGVTADISHMDTGAVVRGFLG-QPQL---EN---AL--  108 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~-----~~g~~~dl~~~~~~~~v~~~~~-~~d~---~~---al--  108 (354)
                      ..|.|+||+|.+|..++..|+..|.. .|+|+.++.     ......++....  ..+..+.. -+|.   .+   .+  
T Consensus        10 gt~lVTGgs~GIG~a~a~~la~~Ga~-~vvl~~R~~~~~~~~~~~~~~l~~~g--~~v~~~~~Dv~d~~~~~~~~~~i~~   86 (259)
T d2fr1a1          10 GTVLVTGGTGGVGGQIARWLARRGAP-HLLLVSRSGPDADGAGELVAELEALG--ARTTVAACDVTDRESVRELLGGIGD   86 (259)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHHTCS-EEEEEESSGGGSTTHHHHHHHHHHTT--CEEEEEECCTTCHHHHHHHHHTSCT
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCC-EEEEEeCCccCHHHHHHHHHHHHhcc--ccccccccccchHHHHHHhhccccc
Confidence            47999999999999999999998862 688886642     233344454332  33333211 1221   11   12  


Q ss_pred             -CCCcEEEEcCCCCCCCC---CCHH---HHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 018512          109 -TGMDLVIIPAGVPRKPG---MTRD---DLFNINAGIVRTLCEGIAKCCPNATVNLIS  159 (354)
Q Consensus       109 -~~aDvVIi~ag~~~~~g---~~r~---d~~~~n~~~~~~i~~~i~~~~p~a~viv~t  159 (354)
                       -..|.||+.+|......   ++..   ..+.-|+.....+.+.+.... .+.++++|
T Consensus        87 ~~~i~~vv~~ag~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~~~~-~~~iv~~S  143 (259)
T d2fr1a1          87 DVPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTRELD-LTAFVLFS  143 (259)
T ss_dssp             TSCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTSC-CSEEEEEE
T ss_pred             cccccccccccccccccccccccHHHHHHHhhhhccchhHHHHHhhccC-CceEeeec
Confidence             24788999888654322   2222   234567777777777666543 34455544

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=94.53  E-value=0.26  Score=41.72  Aligned_cols=76  Identities=16%  Similarity=0.130  Sum_probs=48.1

Q ss_pred             EEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc---hhHHHHHhcCCCCCeEEEEeCC---Cc-----------HHhh
Q 018512           45 VAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT---PGVTADISHMDTGAVVRGFLGQ---PQ-----------LENA  107 (354)
Q Consensus        45 I~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~---~g~~~dl~~~~~~~~v~~~~~~---~d-----------~~~a  107 (354)
                      ..|+||++.+|.+++..|++.|.  +|++.|++..   +..+.++...............   .+           ..+.
T Consensus         4 AlVTGas~GIG~aia~~la~~G~--~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (266)
T d1mxha_           4 AVITGGARRIGHSIAVRLHQQGF--RVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCSFRA   81 (266)
T ss_dssp             EEETTCSSHHHHHHHHHHHHTTC--EEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHHHHH
T ss_pred             EEEeCCCCHHHHHHHHHHHHCCC--EEEEEECCchHHHHHHHHHHHhhcCCceEEEecccccchhHHHHHHHHHHHHHHH
Confidence            46889999999999999999998  9999999862   2333444432211111111000   01           1223


Q ss_pred             hCCCcEEEEcCCCCC
Q 018512          108 LTGMDLVIIPAGVPR  122 (354)
Q Consensus       108 l~~aDvVIi~ag~~~  122 (354)
                      +...|++|..||...
T Consensus        82 ~g~iDilvnnAG~~~   96 (266)
T d1mxha_          82 FGRCDVLVNNASAYY   96 (266)
T ss_dssp             HSCCCEEEECCCCCC
T ss_pred             hCCCCEEEECCccCC
Confidence            467999999998643

>d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Escherichia coli [TaxId: 562]

Probab=94.42  E-value=0.063  Score=43.31  Aligned_cols=70  Identities=14%  Similarity=0.278  Sum_probs=46.3

Q ss_pred             CCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchh--HHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEc
Q 018512           40 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPG--VTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIP  117 (354)
Q Consensus        40 ~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g--~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~  117 (354)
                      .+.++|.|+|| |-.+.++++.|...+.  +|.+++++..++  .+..+.+.   ..+...  +.+ ......+|+||.+
T Consensus        16 ~~~k~vlIlGa-GGaarai~~al~~~g~--~i~I~nRt~~ka~~l~~~~~~~---~~~~~~--~~~-~~~~~~~dliIN~   86 (170)
T d1nyta1          16 RPGLRILLIGA-GGASRGVLLPLLSLDC--AVTITNRTVSRAEELAKLFAHT---GSIQAL--SMD-ELEGHEFDLIINA   86 (170)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTC--EEEEECSSHHHHHHHHHHTGGG---SSEEEC--CSG-GGTTCCCSEEEEC
T ss_pred             CCCCEEEEECC-cHHHHHHHHHhcccce--EEEeccchHHHHHHHHHHHhhc---cccccc--ccc-cccccccceeecc
Confidence            34569999999 9999999999998886  799999876322  22222222   223332  112 2235789999997


Q ss_pred             C
Q 018512          118 A  118 (354)
Q Consensus       118 a  118 (354)
                      .
T Consensus        87 T   87 (170)
T d1nyta1          87 T   87 (170)
T ss_dssp             C
T ss_pred             c
Confidence            4

>d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=94.38  E-value=0.031  Score=42.16  Aligned_cols=37  Identities=16%  Similarity=0.213  Sum_probs=32.2

Q ss_pred             CCCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC
Q 018512           39 GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   78 (354)
Q Consensus        39 ~~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~   78 (354)
                      +..|.||+|||| |++|.-+|..|...|.  +|.+++..+
T Consensus        19 ~~~p~~v~IiGg-G~ig~E~A~~l~~~G~--~Vtlve~~~   55 (117)
T d1ebda2          19 GEVPKSLVVIGG-GYIGIELGTAYANFGT--KVTILEGAG   55 (117)
T ss_dssp             SSCCSEEEEECC-SHHHHHHHHHHHHTTC--EEEEEESSS
T ss_pred             hhcCCeEEEECC-Cccceeeeeeeccccc--EEEEEEecc
Confidence            344569999999 9999999999998887  999999865

>d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=94.34  E-value=0.032  Score=42.69  Aligned_cols=35  Identities=20%  Similarity=0.269  Sum_probs=31.2

Q ss_pred             CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC
Q 018512           41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   78 (354)
Q Consensus        41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~   78 (354)
                      +..+|+|||| |++|.-+|..|...|.  +|.+++..+
T Consensus        29 ~~k~vvViGg-G~iG~E~A~~l~~~g~--~Vtlie~~~   63 (123)
T d1nhpa2          29 EVNNVVVIGS-GYIGIEAAEAFAKAGK--KVTVIDILD   63 (123)
T ss_dssp             TCCEEEEECC-SHHHHHHHHHHHHTTC--EEEEEESSS
T ss_pred             CCCEEEEECC-hHHHHHHHHHhhccce--EEEEEEecC
Confidence            4569999999 9999999999999888  999998865

>d1vl6a1 c.2.1.7 (A:155-376) Malate oxidoreductase (malic enzyme) {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Malate oxidoreductase (malic enzyme)
species: Thermotoga maritima [TaxId: 2336]

Probab=94.27  E-value=0.11  Score=43.88  Aligned_cols=103  Identities=20%  Similarity=0.223  Sum_probs=67.9

Q ss_pred             CCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--c--------hhHHHHHhcCCCCCeEEEEeCCCcHHhhhC
Q 018512           40 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--T--------PGVTADISHMDTGAVVRGFLGQPQLENALT  109 (354)
Q Consensus        40 ~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~--------~g~~~dl~~~~~~~~v~~~~~~~d~~~al~  109 (354)
                      -+..||++.|| |..|..++.++...+. ++++++|.+-  .        .....++.+......     ...++.++++
T Consensus        24 l~d~riv~~GA-GsAg~gia~~l~~~~~-~~i~~~D~~GLi~~~r~~~~~~~~~~~~~~~~~~~~-----~~~~l~~~l~   96 (222)
T d1vl6a1          24 IEEVKVVVNGI-GAAGYNIVKFLLDLGV-KNVVAVDRKGILNENDPETCLNEYHLEIARITNPER-----LSGDLETALE   96 (222)
T ss_dssp             TTTCEEEEECC-SHHHHHHHHHHHHHTC-CEEEEEETTEECCTTSGGGCSSHHHHHHHHTSCTTC-----CCSCHHHHHT
T ss_pred             hhhcEEEEECh-HHHHHHHHHHHHHhcc-cceEeecceeEEEcCcccccccHHHHHHHhhhcchh-----hhcchHhhcc
Confidence            34568999999 9999999999887664 5899999974  1        111222222211111     1246789999


Q ss_pred             CCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCCchH
Q 018512          110 GMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVP  167 (354)
Q Consensus       110 ~aDvVIi~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv~~~~~  167 (354)
                      ++|+++-+..    +|.-+.              +.|++.+++.+|+-.|||..-...
T Consensus        97 g~~~~~g~~~----~~~~~~--------------e~m~~~~~rPIIFpLSNPt~~~e~  136 (222)
T d1vl6a1          97 GADFFIGVSR----GNILKP--------------EWIKKMSRKPVIFALANPVPEIDP  136 (222)
T ss_dssp             TCSEEEECSC----SSCSCH--------------HHHTTSCSSCEEEECCSSSCSSCH
T ss_pred             Ccceeccccc----cccccH--------------HHHhhcCCCCEEEecCCCccchhh
Confidence            9998777642    222111              246677889999989999876553

>d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=94.26  E-value=0.033  Score=42.62  Aligned_cols=34  Identities=24%  Similarity=0.322  Sum_probs=30.9

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   78 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~   78 (354)
                      +.+|+|||| |++|.-+|..|...+.  +|.|++..+
T Consensus        30 ~~~vvIIGg-G~iG~E~A~~l~~~g~--~Vtli~~~~   63 (121)
T d1d7ya2          30 QSRLLIVGG-GVIGLELAATARTAGV--HVSLVETQP   63 (121)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTC--EEEEEESSS
T ss_pred             CCeEEEECc-chhHHHHHHHhhcccc--eEEEEeecc
Confidence            359999999 9999999999999887  999999876

>d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=94.18  E-value=0.035  Score=41.93  Aligned_cols=34  Identities=29%  Similarity=0.419  Sum_probs=30.9

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   78 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~   78 (354)
                      |.||+|||| |++|.-+|..|...|.  ++.+++..+
T Consensus        21 p~~vvIiGg-G~ig~E~A~~l~~~G~--~Vtlve~~~   54 (116)
T d1gesa2          21 PERVAVVGA-GYIGVELGGVINGLGA--KTHLFEMFD   54 (116)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTC--EEEEECSSS
T ss_pred             CCEEEEECC-ChhhHHHHHHhhcccc--EEEEEeecc
Confidence            459999999 9999999999998887  999999875

>d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Plasmodium falciparum [TaxId: 5833]

Probab=94.14  E-value=0.035  Score=42.17  Aligned_cols=34  Identities=24%  Similarity=0.254  Sum_probs=30.3

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   78 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~   78 (354)
                      +.||+|||| |.+|.-+|..|...|.  +|.|++..+
T Consensus        22 p~~v~IiGg-G~iG~E~A~~l~~~g~--~Vtlv~~~~   55 (117)
T d1onfa2          22 SKKIGIVGS-GYIAVELINVIKRLGI--DSYIFARGN   55 (117)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHTTTC--EEEEECSSS
T ss_pred             CCEEEEECC-chHHHHHHHHHHhccc--cceeeehhc
Confidence            569999999 9999999999987776  999999854

>d2gv8a1 c.3.1.5 (A:3-180,A:288-444) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavin-dependent monoxygenase SPBP16F5.08c
species: Schizosaccharomyces pombe [TaxId: 4896]

Probab=94.12  E-value=0.027  Score=50.25  Aligned_cols=36  Identities=25%  Similarity=0.275  Sum_probs=31.6

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   78 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~   78 (354)
                      .+||+|||| |..|.+.|..|+..+...+|++++...
T Consensus         4 ~KrVaIIGa-G~sGl~~A~~L~~~~~~~~v~vfEk~~   39 (335)
T d2gv8a1           4 IRKIAIIGA-GPSGLVTAKALLAEKAFDQVTLFERRG   39 (335)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHTTTCCSEEEEECSSS
T ss_pred             CCeEEEECc-CHHHHHHHHHHHHhCCCCCEEEEECCC
Confidence            358999999 999999999998887766999999975

>d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Glycine oxidase ThiO
species: Bacillus sp. [TaxId: 1409]

Probab=94.10  E-value=0.019  Score=49.30  Aligned_cols=32  Identities=19%  Similarity=0.361  Sum_probs=29.5

Q ss_pred             eEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC
Q 018512           44 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   78 (354)
Q Consensus        44 kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~   78 (354)
                      -|+|||| |-+|.++|+.|.++|.  +|+++|.++
T Consensus         6 DvvIIGa-Gi~Gls~A~~La~~G~--~V~vlE~~~   37 (276)
T d1ryia1           6 EAVVIGG-GIIGSAIAYYLAKENK--NTALFESGT   37 (276)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTC--CEEEECSSS
T ss_pred             CEEEECc-CHHHHHHHHHHHHCCC--cEEEEeCCC
Confidence            3999999 9999999999999997  899999865

>d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=94.07  E-value=0.063  Score=42.25  Aligned_cols=36  Identities=14%  Similarity=0.157  Sum_probs=30.7

Q ss_pred             CCCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecC
Q 018512           39 GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVV   77 (354)
Q Consensus        39 ~~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~   77 (354)
                      +-+.++|.|||| |.+|..-+..|+..|.  +|++++..
T Consensus        10 ~l~gkrvLViGg-G~va~~ka~~Ll~~GA--~VtVvap~   45 (150)
T d1kyqa1          10 QLKDKRILLIGG-GEVGLTRLYKLMPTGC--KLTLVSPD   45 (150)
T ss_dssp             CCTTCEEEEEEE-SHHHHHHHHHHGGGTC--EEEEEEEE
T ss_pred             eeCCCEEEEECC-CHHHHHHHHHHHHCCC--EEEEEeCC
Confidence            445679999999 9999999999999887  88999653

>d2dw4a2 c.3.1.2 (A:274-654,A:764-831) Lysine-specific histone demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Lysine-specific histone demethylase 1, LSD1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.03  E-value=0.028  Score=48.21  Aligned_cols=35  Identities=23%  Similarity=0.235  Sum_probs=31.3

Q ss_pred             CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC
Q 018512           41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   78 (354)
Q Consensus        41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~   78 (354)
                      +..||+|||| |.-|.+.|..|.+.|+  +|.+++...
T Consensus         4 ~~~kViVIGa-G~aGL~aA~~L~~~G~--~V~VlEa~~   38 (449)
T d2dw4a2           4 KTGKVIIIGS-GVSGLAAARQLQSFGM--DVTLLEARD   38 (449)
T ss_dssp             CCCEEEEECC-BHHHHHHHHHHHHTTC--EEEEECSSS
T ss_pred             CCCcEEEECC-CHHHHHHHHHHHhCCC--CEEEEeCCC
Confidence            3458999999 9999999999999998  899999765

>d2vapa1 c.32.1.1 (A:23-231) Cell-division protein FtsZ {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: Tubulin nucleotide-binding domain-like
superfamily: Tubulin nucleotide-binding domain-like
family: Tubulin, GTPase domain
domain: Cell-division protein FtsZ
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=94.01  E-value=0.063  Score=45.20  Aligned_cols=74  Identities=15%  Similarity=0.266  Sum_probs=47.6

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCC-CcEEEEEecCCchhHHHHHhcCCCCCeEEE-------E--------------eC
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPL-VSVLHLYDVVNTPGVTADISHMDTGAVVRG-------F--------------LG  100 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~-~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~-------~--------------~~  100 (354)
                      .||.|||. |.-|.+++..+...++ ..+.+.+|.|.     .+|.+.....++..       .              ..
T Consensus        16 ~ki~ViGv-GGaG~n~v~~l~~~~~~~v~~iainTD~-----~~L~~~~~~~ki~ig~~~t~g~Gag~~p~~g~~aa~e~   89 (209)
T d2vapa1          16 AKITVVGC-GGAGNNTITRLKMEGIEGAKTVAINTDA-----QQLIRTKADKKILIGKKLTRGLGAGGNPKIGEEAAKES   89 (209)
T ss_dssp             CCEEEEEE-HHHHHHHHHHHHHHTCTTEEEEEEESBH-----HHHHTSCCSEEEECCTTTTTTBCCTTCHHHHHHHHHHT
T ss_pred             CcEEEEEe-CChHHHHHHHHHHcCCCceEEEEEeCCH-----HHHhcCCcchhcccccccccccccccchHHHHHHHHHH
Confidence            49999999 9999999998887764 35888888874     22333221111110       0              00


Q ss_pred             CCcHHhhhCCCcEEEEcCCCCC
Q 018512          101 QPQLENALTGMDLVIIPAGVPR  122 (354)
Q Consensus       101 ~~d~~~al~~aDvVIi~ag~~~  122 (354)
                      .....+.++++|.||++||...
T Consensus        90 ~~~I~~~l~~~d~vfi~AGlGG  111 (209)
T d2vapa1          90 AEEIKAAIQDSDMVFITCGLGG  111 (209)
T ss_dssp             HHHHHHHHTTCSEEEEEEETTS
T ss_pred             HHHHHHhccCCCEEEEEEeCCC
Confidence            0134567899999999887664

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

Probab=93.91  E-value=0.25  Score=42.34  Aligned_cols=32  Identities=19%  Similarity=0.195  Sum_probs=27.8

Q ss_pred             EEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC
Q 018512           45 VAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   78 (354)
Q Consensus        45 I~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~   78 (354)
                      ..|+||++.+|..+|..|+..|.  +|++.|.+.
T Consensus         5 AlITGas~GIG~aiA~~la~~Ga--~V~i~~~~~   36 (284)
T d1e7wa_           5 ALVTGAAKRLGRSIAEGLHAEGY--AVCLHYHRS   36 (284)
T ss_dssp             EEETTCSSHHHHHHHHHHHHTTC--EEEEEESSC
T ss_pred             EEEeCCCCHHHHHHHHHHHHcCC--EEEEEeCCC
Confidence            45669989999999999999998  899988765

>d1omoa_ c.2.1.13 (A:) Archaeal alanine dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Ornithine cyclodeaminase-like
domain: Archaeal alanine dehydrogenase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=93.86  E-value=0.051  Score=48.72  Aligned_cols=73  Identities=10%  Similarity=0.051  Sum_probs=49.6

Q ss_pred             CCCCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEE
Q 018512           38 GGAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVI  115 (354)
Q Consensus        38 ~~~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVI  115 (354)
                      ++.....++|||+ |..+..-+..+..--.+.+|.++++++  .+..+.++.+..  ..+..     +..+++.+||+|+
T Consensus       121 a~~~~~~l~iiGa-G~QA~~~~~al~~~~~i~~i~v~~r~~e~~~~~~~~~~~~~--~~~~~-----~~~~a~~~aDiV~  192 (320)
T d1omoa_         121 ARKNSSVFGFIGC-GTQAYFQLEALRRVFDIGEVKAYDVREKAAKKFVSYCEDRG--ISASV-----QPAEEASRCDVLV  192 (320)
T ss_dssp             SCTTCCEEEEECC-SHHHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHHHTT--CCEEE-----CCHHHHTSSSEEE
T ss_pred             ccCCccEEEEecC-cccHHHHHHHHHHHhhhhhcccccCCHHHHHHHHHHHHhcC--Ccccc-----chhhhhccccEEE
Confidence            3555679999999 999888777666544467999999976  334445555432  22221     2257899999998


Q ss_pred             EcC
Q 018512          116 IPA  118 (354)
Q Consensus       116 i~a  118 (354)
                      .+-
T Consensus       193 taT  195 (320)
T d1omoa_         193 TTT  195 (320)
T ss_dssp             ECC
T ss_pred             Eec
Confidence            853

>d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=93.86  E-value=0.044  Score=41.85  Aligned_cols=36  Identities=14%  Similarity=0.181  Sum_probs=31.7

Q ss_pred             CCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC
Q 018512           40 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   78 (354)
Q Consensus        40 ~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~   78 (354)
                      ..|.|++|||| |.+|.-+|..|...|.  +|.+++..+
T Consensus        21 ~~p~~~vIiG~-G~ig~E~A~~l~~lG~--~Vtii~~~~   56 (122)
T d1v59a2          21 EIPKRLTIIGG-GIIGLEMGSVYSRLGS--KVTVVEFQP   56 (122)
T ss_dssp             SCCSEEEEECC-SHHHHHHHHHHHHTTC--EEEEECSSS
T ss_pred             cCCCeEEEECC-CchHHHHHHHHHhhCc--ceeEEEecc
Confidence            34569999999 9999999999998887  999999865

>d1h6da1 c.2.1.3 (A:51-212,A:375-433) Glucose-fructose oxidoreductase, N-terminal domain {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glucose-fructose oxidoreductase, N-terminal domain
species: Zymomonas mobilis [TaxId: 542]

Probab=93.80  E-value=0.043  Score=46.40  Aligned_cols=76  Identities=16%  Similarity=0.087  Sum_probs=44.0

Q ss_pred             cCCCCCCCeEEEEcCCCchHHH-HHHHHHhCCCCcEEE-EEecCCch--hHHHHHhcCCCCCeEEEEeCCCcHHhhhC--
Q 018512           36 AKGGAAGFKVAILGAAGGIGQP-LAMLMKINPLVSVLH-LYDVVNTP--GVTADISHMDTGAVVRGFLGQPQLENALT--  109 (354)
Q Consensus        36 ~~~~~~~~kI~IiGa~G~vG~~-~a~~l~~~~~~~ei~-L~D~~~~~--g~~~dl~~~~~~~~v~~~~~~~d~~~al~--  109 (354)
                      |....++.||+|||+ |.+|.. ++..+...+.+ +|+ ++|+++..  ....++. .. ...+..   .+|+++.++  
T Consensus        27 ~~~~~~~iriaiIG~-G~~~~~~~~~~~~~~~~~-~ivav~d~~~~~a~~~~~~~~-i~-~~~~~~---~~d~~ell~~~   99 (221)
T d1h6da1          27 PMPEDRRFGYAIVGL-GKYALNQILPGFAGCQHS-RIEALVSGNAEKAKIVAAEYG-VD-PRKIYD---YSNFDKIAKDP   99 (221)
T ss_dssp             CCCCCCCEEEEEECC-SHHHHHTHHHHTTTCSSE-EEEEEECSCHHHHHHHHHHTT-CC-GGGEEC---SSSGGGGGGCT
T ss_pred             CCCCCCCEEEEEEcC-cHHHHHHHHHHHHhCCCc-eEEEEecCCHHHHHHHHHhhc-cc-cccccc---cCchhhhcccc
Confidence            333445679999998 999974 55555544433 554 88987622  2222221 11 122332   246666664  


Q ss_pred             CCcEEEEcC
Q 018512          110 GMDLVIIPA  118 (354)
Q Consensus       110 ~aDvVIi~a  118 (354)
                      +.|+|+++.
T Consensus       100 ~iD~V~I~t  108 (221)
T d1h6da1         100 KIDAVYIIL  108 (221)
T ss_dssp             TCCEEEECS
T ss_pred             cceeeeecc
Confidence            688999874

>d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=93.69  E-value=0.046  Score=42.42  Aligned_cols=34  Identities=21%  Similarity=0.321  Sum_probs=30.8

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   78 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~   78 (354)
                      +.||+|||| |++|.-+|..|...+.  +|.+++..+
T Consensus        35 ~k~v~VIGg-G~iG~E~A~~l~~~g~--~Vtvie~~~   68 (133)
T d1q1ra2          35 DNRLVVIGG-GYIGLEVAATAIKANM--HVTLLDTAA   68 (133)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTC--EEEEECSSS
T ss_pred             CCEEEEECC-chHHHHHHHHHHhhCc--ceeeeeecc
Confidence            359999999 9999999999999887  999999865

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.67  E-value=0.52  Score=40.82  Aligned_cols=114  Identities=14%  Similarity=0.168  Sum_probs=60.6

Q ss_pred             CeEEE-EcCCCchHHHHHHHHHhCCCCcEEEEEe---cCC-chhHHHHH-hcCC-CCCeEEEEe-CCCcHH---hhh---
Q 018512           43 FKVAI-LGAAGGIGQPLAMLMKINPLVSVLHLYD---VVN-TPGVTADI-SHMD-TGAVVRGFL-GQPQLE---NAL---  108 (354)
Q Consensus        43 ~kI~I-iGa~G~vG~~~a~~l~~~~~~~ei~L~D---~~~-~~g~~~dl-~~~~-~~~~v~~~~-~~~d~~---~al---  108 (354)
                      +||++ +||++-+|.++|..|+..|.  .+++++   .+. ......+. .... ....+..+. +-+|.+   +++   
T Consensus         2 kkVvlITGassGIG~a~A~~la~~Ga--~v~~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~   79 (285)
T d1jtva_           2 RTVVLITGCSSGIGLHLAVRLASDPS--QSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERV   79 (285)
T ss_dssp             CEEEEESCCSSHHHHHHHHHHHTCTT--CCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTC
T ss_pred             CCEEEEccCCCHHHHHHHHHHHHCCC--CeEEEEEecCChhhhHHHHHHHHHHhccCCceEEEeccccchHhhhhhhhhc
Confidence            47765 59999999999999999886  444443   222 11111111 1111 122333321 112221   111   


Q ss_pred             --CCCcEEEEcCCCCCCCC---CC---HHHHHHHH----HHHHHHHHHHHhhhCCCeEEEEec
Q 018512          109 --TGMDLVIIPAGVPRKPG---MT---RDDLFNIN----AGIVRTLCEGIAKCCPNATVNLIS  159 (354)
Q Consensus       109 --~~aDvVIi~ag~~~~~g---~~---r~d~~~~n----~~~~~~i~~~i~~~~p~a~viv~t  159 (354)
                        ...|++|..+|......   .+   ....+.-|    +...+.+.+.|++.. .+.||++|
T Consensus        80 ~~g~idilvnnag~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~m~~~~-~G~Iv~is  141 (285)
T d1jtva_          80 TEGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRG-SGRVLVTG  141 (285)
T ss_dssp             TTSCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEEE
T ss_pred             cccchhhhhhcccccccccccchhHhhhhhhhhcchhHHHHHHHHHHHHHHHcC-CCceEEEe
Confidence              46899999988654322   12   22234445    446667777777654 45566664

>d1edza1 c.2.1.7 (A:149-319) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=93.54  E-value=0.018  Score=47.17  Aligned_cols=80  Identities=19%  Similarity=0.227  Sum_probs=51.8

Q ss_pred             CCCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCch----hHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEE
Q 018512           39 GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP----GVTADISHMDTGAVVRGFLGQPQLENALTGMDLV  114 (354)
Q Consensus        39 ~~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~----g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvV  114 (354)
                      +-+.++|+|||.+.-||..++.+|...+.  .+.+.|.+...    .....+.+.. .+.+..+ ..+.+++....||+|
T Consensus        26 ~l~GK~vvVIGrS~iVG~Pla~lL~~~ga--TVt~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~lk~~~~~aDIv  101 (171)
T d1edza1          26 RLYGKKCIVINRSEIVGRPLAALLANDGA--TVYSVDVNNIQKFTRGESLKLNKHH-VEDLGEY-SEDLLKKCSLDSDVV  101 (171)
T ss_dssp             TTTTCEEEEECCCTTTHHHHHHHHHTTSC--EEEEECSSEEEEEESCCCSSCCCCE-EEEEEEC-CHHHHHHHHHHCSEE
T ss_pred             CCCCCEEEEECCccccHHHHHHHHHHCCC--EEEEeccccccccccccceeeeeec-ccccccc-chhHHhhccccCCEE
Confidence            45567999999967789999999998876  88888876411    0001111111 1122221 113467788899999


Q ss_pred             EEcCCCCC
Q 018512          115 IIPAGVPR  122 (354)
Q Consensus       115 Ii~ag~~~  122 (354)
                      |...|.|.
T Consensus       102 IsavG~p~  109 (171)
T d1edza1         102 ITGVPSEN  109 (171)
T ss_dssp             EECCCCTT
T ss_pred             EEccCCCc
Confidence            99988764

>d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.54  E-value=0.14  Score=41.44  Aligned_cols=58  Identities=19%  Similarity=0.375  Sum_probs=42.6

Q ss_pred             CCCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcC
Q 018512           39 GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA  118 (354)
Q Consensus        39 ~~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~a  118 (354)
                      +-+.++|+|||.+..||..++..|...+.  .+.+++...                       .++.+-+++||+||.+.
T Consensus        36 ~l~Gk~vvVIGrS~iVGrPLa~lL~~~ga--tVt~~~~~t-----------------------~~l~~~~~~aDivi~a~   90 (170)
T d1a4ia1          36 PIAGRHAVVVGRSKIVGAPMHDLLLWNNA--TVTTCHSKT-----------------------AHLDEEVNKGDILVVAT   90 (170)
T ss_dssp             CCTTCEEEEECCCTTTHHHHHHHHHHTTC--EEEEECTTC-----------------------SSHHHHHTTCSEEEECC
T ss_pred             ccccceEEEEecCCccchHHHHHHHhccC--ceEEEeccc-----------------------ccHHHHHhhccchhhcc
Confidence            34567999999977899999999999886  888887643                       23344456677777666


Q ss_pred             CCC
Q 018512          119 GVP  121 (354)
Q Consensus       119 g~~  121 (354)
                      |.|
T Consensus        91 G~~   93 (170)
T d1a4ia1          91 GQP   93 (170)
T ss_dssp             CCT
T ss_pred             ccc
Confidence            654

>d1o0sa1 c.2.1.7 (A:296-603) Mitochondrial NAD(P)-dependent malic enzyme {Pig roundworm (Ascaris suum) [TaxId: 6253]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Mitochondrial NAD(P)-dependent malic enzyme
species: Pig roundworm (Ascaris suum) [TaxId: 6253]

Probab=93.38  E-value=0.019  Score=51.27  Aligned_cols=107  Identities=13%  Similarity=0.182  Sum_probs=62.5

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHh----CCCC-----cEEEEEecCC--chhHHHHHhcCCCCCeEEEEeCCCcHHhhhCC
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKI----NPLV-----SVLHLYDVVN--TPGVTADISHMDTGAVVRGFLGQPQLENALTG  110 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~----~~~~-----~ei~L~D~~~--~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~  110 (354)
                      ..||+|.|| |..|..++.+|+.    .|+.     +.++++|.+.  .... .|+..... ...+......++.++++.
T Consensus        25 d~kivi~GA-GaAg~gia~~l~~~~~~~G~~~~~a~~~i~~vD~~Glv~~~r-~d~~~~k~-~~a~~~~~~~~l~~~i~~  101 (308)
T d1o0sa1          25 QEKYLFFGA-GAASTGIAEMIVHQMQNEGISKEEACNRIYLMDIDGLVTKNR-KEMNPRHV-QFAKDMPETTSILEVIRA  101 (308)
T ss_dssp             GCCEEEECC-SHHHHHHHHHHHHHHHTTTCCHHHHHHTEEEEETTEECBTTC-SSCCGGGT-TTCBSSCCCCCHHHHHHH
T ss_pred             HcEEEEECc-CHHHHHHHHHHHHHHHhcCCchhhhhceEEEEeCCCCccCCC-cccCHHHH-HHHHhcccCCcHHHHHhc
Confidence            458999999 9999998877653    3432     3599999875  1111 12221110 001111112345555543


Q ss_pred             C--cEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCCc
Q 018512          111 M--DLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNST  165 (354)
Q Consensus       111 a--DvVIi~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv~~~  165 (354)
                      +  +++|-+.+.+..              +.+++.+.|.+.+++.+|+-.|||..-.
T Consensus       102 ~kptvliG~s~~~g~--------------ft~evv~~Ma~~~~~PIIFaLSNPtp~~  144 (308)
T d1o0sa1         102 ARPGALIGASTVRGA--------------FNEEVIRAMAEINERPIIFALSNPTSKA  144 (308)
T ss_dssp             HCCSEEEECSSCTTC--------------SCHHHHHHHHHHCSSCEEEECCSSGGGC
T ss_pred             cccccEEecccccCC--------------CCHHHHHHHHhhCCCcEEEEccCCCCCC
Confidence            3  566665544421              2245567788889999999999998633

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=93.36  E-value=0.32  Score=39.01  Aligned_cols=94  Identities=16%  Similarity=0.159  Sum_probs=56.3

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc-hhHHHHHhcCCCCCeEEEEeCCCcHH---hhh------CCC
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT-PGVTADISHMDTGAVVRGFLGQPQLE---NAL------TGM  111 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~-~g~~~dl~~~~~~~~v~~~~~~~d~~---~al------~~a  111 (354)
                      .-+|.|+|| |.+|...++.+...|. ..|+.+|.++. ...+.++.   ....+. . ...+..   +.+      .++
T Consensus        29 G~~VlV~Ga-G~iG~~~~~~ak~~Ga-~~Vi~~~~~~~~~~~a~~lG---a~~vi~-~-~~~~~~~~~~~i~~~~~~~g~  101 (182)
T d1vj0a2          29 GKTVVIQGA-GPLGLFGVVIARSLGA-ENVIVIAGSPNRLKLAEEIG---ADLTLN-R-RETSVEERRKAIMDITHGRGA  101 (182)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTB-SEEEEEESCHHHHHHHHHTT---CSEEEE-T-TTSCHHHHHHHHHHHTTTSCE
T ss_pred             CCEEEEECC-Cccchhheeccccccc-cccccccccccccccccccc---ceEEEe-c-cccchHHHHHHHHHhhCCCCc
Confidence            458999998 9999998888888775 37999999762 22333332   111111 1 112221   111      369


Q ss_pred             cEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecC
Q 018512          112 DLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISN  160 (354)
Q Consensus       112 DvVIi~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tN  160 (354)
                      |+||.+.|.+.               .+.+..+.   ..|.+.+++++.
T Consensus       102 Dvvid~vG~~~---------------~~~~a~~~---l~~~G~iv~~G~  132 (182)
T d1vj0a2         102 DFILEATGDSR---------------ALLEGSEL---LRRGGFYSVAGV  132 (182)
T ss_dssp             EEEEECSSCTT---------------HHHHHHHH---EEEEEEEEECCC
T ss_pred             eEEeecCCchh---------------HHHHHHHH---hcCCCEEEEEee
Confidence            99999876542               22222333   347888877754

>d1b5qa1 c.3.1.2 (A:5-293,A:406-463) Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Polyamine oxidase
species: Maize (Zea mays) [TaxId: 4577]

Probab=93.32  E-value=0.032  Score=45.89  Aligned_cols=33  Identities=21%  Similarity=0.333  Sum_probs=29.3

Q ss_pred             eEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC
Q 018512           44 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   78 (354)
Q Consensus        44 kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~   78 (354)
                      ||+|||| |..|.+.|..|.+.|+ .+|+++|..+
T Consensus         2 ~V~IIGa-G~aGL~aA~~L~~~G~-~~V~vlE~~~   34 (347)
T d1b5qa1           2 RVIVVGA-GMSGISAAKRLSEAGI-TDLLILEATD   34 (347)
T ss_dssp             CEEEECC-BHHHHHHHHHHHHTTC-CCEEEECSSS
T ss_pred             CEEEECC-cHHHHHHHHHHHhCCC-CcEEEEECCC
Confidence            7999999 9999999999999885 2699999865

>d1gq2a1 c.2.1.7 (A:280-580) Mitochondrial NAD(P)-dependent malic enzyme {Domestic pigeon (Columba livia) [TaxId: 8932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Mitochondrial NAD(P)-dependent malic enzyme
species: Domestic pigeon (Columba livia) [TaxId: 8932]

Probab=93.30  E-value=0.024  Score=50.44  Aligned_cols=108  Identities=16%  Similarity=0.216  Sum_probs=62.9

Q ss_pred             CCCeEEEEcCCCchHHHHHHHHHh----CCC-----CcEEEEEecCC-chhHHHHHhcCCCCCeEEEEeCCCcHHhhhCC
Q 018512           41 AGFKVAILGAAGGIGQPLAMLMKI----NPL-----VSVLHLYDVVN-TPGVTADISHMDTGAVVRGFLGQPQLENALTG  110 (354)
Q Consensus        41 ~~~kI~IiGa~G~vG~~~a~~l~~----~~~-----~~ei~L~D~~~-~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~  110 (354)
                      +..||+|.|| |..|..++.+|..    .|+     ...++++|.+. ......|+.+... +..+......++.+.++.
T Consensus        24 ~d~kiV~~GA-GsAg~gia~~l~~~~~~~G~~~~~a~~~i~l~D~kGlv~~~R~~l~~~k~-~~a~~~~~~~~l~~~i~~  101 (298)
T d1gq2a1          24 SDHTVLFQGA-GEAALGIANLIVMAMQKEGVSKEEAIKRIWMVDSKGLIVKGRASLTPEKE-HFAHEHCEMKNLEDIVKD  101 (298)
T ss_dssp             GGCCEEEECC-SHHHHHHHHHHHHHHHHHTCCHHHHHTTEEEEETTEECBTTCSSCCTTGG-GGCBSCCCCCCHHHHHHH
T ss_pred             HHcEEEEECc-cHHHHHHHHHHHHHHHHcCCChhhccceEEEEeCCCcccCCCcccCHHHH-HHHHHhhhhhhhHHHhhc
Confidence            3458999999 9999998877653    232     24799999975 1111122322110 000000011244444443


Q ss_pred             --CcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCC
Q 018512          111 --MDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNS  164 (354)
Q Consensus       111 --aDvVIi~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv~~  164 (354)
                        .+++|-+.+.+   |.           +.+++.+.|.+.+++.+|+-.|||..-
T Consensus       102 vkptvliG~s~~~---g~-----------ft~evv~~ma~~~~~PIIFaLSNPt~~  143 (298)
T d1gq2a1         102 IKPTVLIGVAAIG---GA-----------FTQQILQDMAAFNKRPIIFALSNPTSK  143 (298)
T ss_dssp             HCCSEEEECSCCT---TC-----------SCHHHHHHHHHHCSSCEEEECCSSGGG
T ss_pred             cChheeEeccccc---Cc-----------CCHHHHHHHHhhCCCCEEEEccCCCCc
Confidence              56777665544   21           223556677788999999999999753

>d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=93.27  E-value=0.049  Score=40.94  Aligned_cols=35  Identities=14%  Similarity=0.222  Sum_probs=30.9

Q ss_pred             CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC
Q 018512           41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   78 (354)
Q Consensus        41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~   78 (354)
                      -|.|++|+|| |++|.-+|..|...|.  +|.+++..+
T Consensus        20 ~p~~vvIiGg-G~~G~E~A~~l~~~g~--~Vtlve~~~   54 (115)
T d1lvla2          20 LPQHLVVVGG-GYIGLELGIAYRKLGA--QVSVVEARE   54 (115)
T ss_dssp             CCSEEEEECC-SHHHHHHHHHHHHHTC--EEEEECSSS
T ss_pred             CCCeEEEECC-CHHHHHHHHHHhhccc--ceEEEeeec
Confidence            3469999999 9999999999998887  999999865

>d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Escherichia coli [TaxId: 562]

Probab=93.26  E-value=0.1  Score=42.19  Aligned_cols=59  Identities=20%  Similarity=0.435  Sum_probs=44.6

Q ss_pred             CCCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcC
Q 018512           39 GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA  118 (354)
Q Consensus        39 ~~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~a  118 (354)
                      +-..++|+|||.+..||..++.+|...+.  .|...+..                       +.++.+-+++||+||.++
T Consensus        34 ~l~GK~v~VIGrS~~VG~Pla~lL~~~ga--tVt~~h~~-----------------------t~~l~~~~~~ADivI~a~   88 (166)
T d1b0aa1          34 DTFGLNAVVIGASNIVGRPMSMELLLAGC--TTTVTHRF-----------------------TKNLRHHVENADLLIVAV   88 (166)
T ss_dssp             CCTTCEEEEECCCTTTHHHHHHHHHTTTC--EEEEECSS-----------------------CSCHHHHHHHCSEEEECS
T ss_pred             ccccceEEEEeccccccHHHHHHHHHhhc--cccccccc-----------------------cchhHHHHhhhhHhhhhc
Confidence            34457999999977899999999998876  67666542                       234556678888888888


Q ss_pred             CCCC
Q 018512          119 GVPR  122 (354)
Q Consensus       119 g~~~  122 (354)
                      |.|.
T Consensus        89 G~p~   92 (166)
T d1b0aa1          89 GKPG   92 (166)
T ss_dssp             CCTT
T ss_pred             cCcc
Confidence            7663

>d1cjca2 c.4.1.1 (A:6-106,A:332-460) Adrenodoxin reductase of mitochondrial p450 systems {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Adrenodoxin reductase of mitochondrial p450 systems
species: Cow (Bos taurus) [TaxId: 9913]

Probab=93.20  E-value=0.038  Score=46.31  Aligned_cols=35  Identities=14%  Similarity=0.194  Sum_probs=29.6

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   78 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~   78 (354)
                      .||+|||| |-.|.+.|..|...+...+|.+||..+
T Consensus         2 ~kv~iIGa-GpaGl~aA~~L~~~~~~~~V~v~e~~~   36 (230)
T d1cjca2           2 PQICVVGS-GPAGFYTAQHLLKHHSRAHVDIYEKQL   36 (230)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHCSSCEEEEECSSS
T ss_pred             CeEEEECc-cHHHHHHHHHHHhcCCCCeEEEEeCCC
Confidence            39999999 999999999887764434999999875

>d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=93.19  E-value=0.028  Score=45.77  Aligned_cols=74  Identities=18%  Similarity=0.284  Sum_probs=47.9

Q ss_pred             CCCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCCC---CeEEEEeCCCcHHhhhCCCcE
Q 018512           39 GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTG---AVVRGFLGQPQLENALTGMDL  113 (354)
Q Consensus        39 ~~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~~---~~v~~~~~~~d~~~al~~aDv  113 (354)
                      +.+.++|.|+|+ |.++.++++.|...+   +|.+++++.  ++..+.++......   ..+..    .++...+.++|+
T Consensus        15 ~~~~k~vlIlGa-GG~arai~~aL~~~~---~i~I~nR~~~ka~~l~~~~~~~~~~~~~~~~~~----~~~~~~~~~~dl   86 (177)
T d1nvta1          15 RVKDKNIVIYGA-GGAARAVAFELAKDN---NIIIANRTVEKAEALAKEIAEKLNKKFGEEVKF----SGLDVDLDGVDI   86 (177)
T ss_dssp             CCCSCEEEEECC-SHHHHHHHHHHTSSS---EEEEECSSHHHHHHHHHHHHHHHTCCHHHHEEE----ECTTCCCTTCCE
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHcccc---ceeeehhhhhHHHHHHHHHHHhhchhhhhhhhh----hhhhhccchhhh
Confidence            456679999999 989999988885433   899999976  23334444332111   11222    234556789999


Q ss_pred             EEEcCCC
Q 018512          114 VIIPAGV  120 (354)
Q Consensus       114 VIi~ag~  120 (354)
                      ||.+...
T Consensus        87 iIn~tp~   93 (177)
T d1nvta1          87 IINATPI   93 (177)
T ss_dssp             EEECSCT
T ss_pred             hccCCcc
Confidence            9997543

>d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Haemophilus influenzae [TaxId: 727]

Probab=93.17  E-value=0.078  Score=42.91  Aligned_cols=71  Identities=20%  Similarity=0.207  Sum_probs=47.5

Q ss_pred             CCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--chhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEc
Q 018512           40 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIP  117 (354)
Q Consensus        40 ~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~  117 (354)
                      .+..+|.|+|+ |-++.++++.|...+  .+|++++++.  ++..+..+...   ..+....  .+ ...+.++|+||.+
T Consensus        16 ~~~k~vlIlGa-GGaarai~~aL~~~~--~~i~I~nR~~~~a~~l~~~~~~~---~~~~~~~--~~-~~~~~~~diiIN~   86 (171)
T d1p77a1          16 RPNQHVLILGA-GGATKGVLLPLLQAQ--QNIVLANRTFSKTKELAERFQPY---GNIQAVS--MD-SIPLQTYDLVINA   86 (171)
T ss_dssp             CTTCEEEEECC-SHHHHTTHHHHHHTT--CEEEEEESSHHHHHHHHHHHGGG---SCEEEEE--GG-GCCCSCCSEEEEC
T ss_pred             CCCCEEEEECC-cHHHHHHHHHHcccC--ceeeeccchHHHHHHHHHHHhhc---cccchhh--hc-cccccccceeeec
Confidence            34568999999 999999999888754  4899999976  33334444422   1233221  12 2347899999998


Q ss_pred             CC
Q 018512          118 AG  119 (354)
Q Consensus       118 ag  119 (354)
                      ..
T Consensus        87 tp   88 (171)
T d1p77a1          87 TS   88 (171)
T ss_dssp             CC
T ss_pred             cc
Confidence            54

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=93.15  E-value=0.28  Score=41.51  Aligned_cols=34  Identities=21%  Similarity=0.162  Sum_probs=29.2

Q ss_pred             CeEEEEcCCCchHHHHHHHHHh---CCCCcEEEEEecCC
Q 018512           43 FKVAILGAAGGIGQPLAMLMKI---NPLVSVLHLYDVVN   78 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~---~~~~~ei~L~D~~~   78 (354)
                      ++|.|+||++-+|..+|..|+.   .|.  .|++.++++
T Consensus         3 KtilITGas~GIG~a~a~~l~~~a~~g~--~V~~~~r~~   39 (248)
T d1snya_           3 NSILITGCNRGLGLGLVKALLNLPQPPQ--HLFTTCRNR   39 (248)
T ss_dssp             SEEEESCCSSHHHHHHHHHHHTSSSCCS--EEEEEESCT
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHHHhCCC--EEEEEECCH
Confidence            4699999999999999998875   455  899999987

>d1lqta2 c.4.1.1 (A:2-108,A:325-456) Ferredoxin:NADP reductase FprA {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Ferredoxin:NADP reductase FprA
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=93.10  E-value=0.025  Score=47.38  Aligned_cols=37  Identities=14%  Similarity=0.147  Sum_probs=31.1

Q ss_pred             CCCeEEEEcCCCchHHHHHHHHHhCCC-----CcEEEEEecCC
Q 018512           41 AGFKVAILGAAGGIGQPLAMLMKINPL-----VSVLHLYDVVN   78 (354)
Q Consensus        41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~-----~~ei~L~D~~~   78 (354)
                      +|.||+|||| |--|.+.|..|...|+     ..+|.+||..+
T Consensus         1 rp~~VaVIGa-GpaGL~aA~~L~~~G~~~~~~~~~V~v~E~~~   42 (239)
T d1lqta2           1 RPYYIAIVGS-GPSAFFAAASLLKAADTTEDLDMAVDMLEMLP   42 (239)
T ss_dssp             CCEEEEEECC-SHHHHHHHHHHHHHHHHSTTCCEEEEEEESSS
T ss_pred             CCcEEEEECc-CHHHHHHHHHHHHcCCccccCCCceEEEecCC
Confidence            3569999999 9999999999988763     23899999876

>d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Molybdenum cofactor biosynthesis protein MoeB
domain: Molybdenum cofactor biosynthesis protein MoeB
species: Escherichia coli [TaxId: 562]

Probab=93.07  E-value=0.037  Score=47.46  Aligned_cols=34  Identities=26%  Similarity=0.372  Sum_probs=30.9

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   78 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~   78 (354)
                      .||+|+|+ |.+|+.++..|+..|.. +|+|+|-|.
T Consensus        31 ~~VliiG~-GglGs~va~~La~~Gvg-~i~lvD~D~   64 (247)
T d1jw9b_          31 SRVLIVGL-GGLGCAASQYLASAGVG-NLTLLDFDT   64 (247)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCS-EEEEECCCB
T ss_pred             CCEEEECC-CHHHHHHHHHHHHcCCC-eEEEECCcc
Confidence            38999999 99999999999999974 999999876

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=93.02  E-value=0.13  Score=41.34  Aligned_cols=98  Identities=14%  Similarity=0.241  Sum_probs=58.0

Q ss_pred             CCCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC-chhHHHHHhcCCCCCeEEEEeCCCcHHhhh-----CCCc
Q 018512           39 GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN-TPGVTADISHMDTGAVVRGFLGQPQLENAL-----TGMD  112 (354)
Q Consensus        39 ~~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~-~~g~~~dl~~~~~~~~v~~~~~~~d~~~al-----~~aD  112 (354)
                      ..+..+|+|+|+ |.+|...+..+...+.. .|+..|.++ ....+.++.-    ..+-.. ...++.+.+     .+.|
T Consensus        26 ~~~g~~VlI~G~-G~iG~~~~~~ak~~g~~-~v~~~~~~~~k~~~a~~~Ga----~~~i~~-~~~~~~~~i~~~t~gg~D   98 (174)
T d1f8fa2          26 VTPASSFVTWGA-GAVGLSALLAAKVCGAS-IIIAVDIVESRLELAKQLGA----THVINS-KTQDPVAAIKEITDGGVN   98 (174)
T ss_dssp             CCTTCEEEEESC-SHHHHHHHHHHHHHTCS-EEEEEESCHHHHHHHHHHTC----SEEEET-TTSCHHHHHHHHTTSCEE
T ss_pred             CCCCCEEEEeCC-CHHHhhhhhcccccccc-eeeeeccHHHHHHHHHHcCC----eEEEeC-CCcCHHHHHHHHcCCCCc
Confidence            344568999998 99999999888777753 677888876 2233344431    111111 223444433     2489


Q ss_pred             EEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCC
Q 018512          113 LVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNP  161 (354)
Q Consensus       113 vVIi~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNP  161 (354)
                      +||.+.|.+               ..+.+..+.   ..|.+.+++++.|
T Consensus        99 ~vid~~G~~---------------~~~~~~~~~---~~~~G~i~~~G~~  129 (174)
T d1f8fa2          99 FALESTGSP---------------EILKQGVDA---LGILGKIAVVGAP  129 (174)
T ss_dssp             EEEECSCCH---------------HHHHHHHHT---EEEEEEEEECCCC
T ss_pred             EEEEcCCcH---------------HHHHHHHhc---ccCceEEEEEeec
Confidence            999987633               122222222   3478888887643

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

Probab=93.00  E-value=0.72  Score=38.84  Aligned_cols=162  Identities=16%  Similarity=0.111  Sum_probs=84.3

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEe-CCCcH---H-------hhh--
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFL-GQPQL---E-------NAL--  108 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~-~~~d~---~-------~al--  108 (354)
                      ++.|.|+||++-+|..++..|+..|....|++.+++....  .++.... ...+..+. +-++.   +       +.+  
T Consensus         3 ~KtilITGassGIG~a~a~~la~~G~~~~Vi~~~R~~~~~--~~l~~~~-~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~   79 (250)
T d1yo6a1           3 PGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKA--TELKSIK-DSRVHVLPLTVTCDKSLDTFVSKVGEIVGS   79 (250)
T ss_dssp             CSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGC--HHHHTCC-CTTEEEEECCTTCHHHHHHHHHHHHHHHGG
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCCCEEEEEeCCHHHH--HHHHHhh-CCceEEEEEecCCHHHHHHHHHHHHHHhCC
Confidence            4579999999999999999999988644788888775221  2233322 12232221 11221   1       112  


Q ss_pred             CCCcEEEEcCCCCCCC----CCCH---HHHHHHHH----HHHHHHHHHHhhhC----------CCeEEEEecCCCCCchH
Q 018512          109 TGMDLVIIPAGVPRKP----GMTR---DDLFNINA----GIVRTLCEGIAKCC----------PNATVNLISNPVNSTVP  167 (354)
Q Consensus       109 ~~aDvVIi~ag~~~~~----g~~r---~d~~~~n~----~~~~~i~~~i~~~~----------p~a~viv~tNPv~~~~~  167 (354)
                      .+.|++|..||.....    ..+.   ...+.-|+    ...+.+.+.|++..          ..+.+++++........
T Consensus        80 ~~idilinnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~l~~~~~~~~~~~~~~~~~~~i~~s~~~~~~~~  159 (250)
T d1yo6a1          80 DGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITD  159 (250)
T ss_dssp             GCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGCSTT
T ss_pred             CCeEEEEEcCcccCCCCccccCCHHHHHHHHHHHhhhHHHHHHHHHHHHHHhccCCCCccccceeccccccccccccccC
Confidence            2489999999964322    1222   23344453    44556666666542          23556655533322210


Q ss_pred             HHHHHHHHhCCCCCCC--EEEeccchHHHHHHHHHHHhCCCCCCCcceEE
Q 018512          168 IAAEVFKKAGTYDPKK--LLGVTMLDVVRANTFVAEVLGLDPRDVDVPVV  215 (354)
Q Consensus       168 ~~~~~~~~~~~~p~~k--viG~t~ld~~r~~~~la~~l~v~~~~v~~~v~  215 (354)
                             ...+.+...  .++.+...-..|.+.+|+.+.  +..|++..+
T Consensus       160 -------~~~~~~~~~~~aY~aSKaal~~l~~~la~el~--~~gI~v~~i  200 (250)
T d1yo6a1         160 -------NTSGSAQFPVLAYRMSKAAINMFGRTLAVDLK--DDNVLVVNF  200 (250)
T ss_dssp             -------CCSTTSSSCBHHHHHHHHHHHHHHHHHHHHTG--GGTCEEEEE
T ss_pred             -------CcccccchhHHHHHHHHHHHHHHHHHHHHHhc--ccCeEEEEE
Confidence                   011111111  133333344566777777763  445555444

>d1kifa1 c.4.1.2 (A:1-194,A:288-339) D-aminoacid oxidase, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=92.99  E-value=0.007  Score=50.87  Aligned_cols=34  Identities=24%  Similarity=0.330  Sum_probs=27.3

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCC----CcEEEEEecC
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPL----VSVLHLYDVV   77 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~----~~ei~L~D~~   77 (354)
                      |||+|||| |-+|.+.|+.|+++++    ..++.+++..
T Consensus         1 mkV~VIGa-Gi~GlstA~~L~~~G~~v~v~e~~~i~~~~   38 (246)
T d1kifa1           1 MRVVVIGA-GVIGLSTALCIHERYHSVLQPLDVKVYADR   38 (246)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHHTTTSSSCEEEEEESC
T ss_pred             CEEEEECc-hHHHHHHHHHHHHCCCCceEEeeeeecccC
Confidence            79999999 9999999999998764    2355666543

>d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]

Probab=92.88  E-value=0.11  Score=41.82  Aligned_cols=68  Identities=22%  Similarity=0.180  Sum_probs=50.3

Q ss_pred             CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcCCC
Q 018512           41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGV  120 (354)
Q Consensus        41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~ag~  120 (354)
                      ..++++|+|= |.+|..+|..+...|.  .|...++|+..+... ..+.   -.+      ...+++++.+|+||.+.|.
T Consensus        22 aGk~vvV~GY-G~vGrG~A~~~rg~Ga--~V~V~E~DPi~alqA-~mdG---f~v------~~~~~a~~~aDi~vTaTGn   88 (163)
T d1v8ba1          22 SGKIVVICGY-GDVGKGCASSMKGLGA--RVYITEIDPICAIQA-VMEG---FNV------VTLDEIVDKGDFFITCTGN   88 (163)
T ss_dssp             TTSEEEEECC-SHHHHHHHHHHHHHTC--EEEEECSCHHHHHHH-HTTT---CEE------CCHHHHTTTCSEEEECCSS
T ss_pred             cCCEEEEecc-cccchhHHHHHHhCCC--EEEEEecCchhhHHH-HhcC---Ccc------CchhHccccCcEEEEcCCC
Confidence            3458999999 9999999999987777  899999998433211 1221   111      2467999999999998664


Q ss_pred             C
Q 018512          121 P  121 (354)
Q Consensus       121 ~  121 (354)
                      .
T Consensus        89 ~   89 (163)
T d1v8ba1          89 V   89 (163)
T ss_dssp             S
T ss_pred             C
Confidence            4

>d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, middle domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=92.82  E-value=0.075  Score=44.76  Aligned_cols=36  Identities=28%  Similarity=0.327  Sum_probs=32.3

Q ss_pred             CCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC
Q 018512           40 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   78 (354)
Q Consensus        40 ~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~   78 (354)
                      ..+.||+|||| |..|.+.|..|...|+  ++.++|...
T Consensus        47 ~~~k~VvIIGa-GpAGl~aA~~l~~~G~--~v~l~E~~~   82 (233)
T d1djqa3          47 KNKDSVLIVGA-GPSGSEAARVLMESGY--TVHLTDTAE   82 (233)
T ss_dssp             SSCCEEEEECC-SHHHHHHHHHHHHTTC--EEEEECSSS
T ss_pred             cCCceEEEEcc-cHHHHHHHHHHHHhcc--ceeeEeecc
Confidence            34579999999 9999999999999998  999999865

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=92.81  E-value=0.052  Score=46.23  Aligned_cols=34  Identities=21%  Similarity=0.321  Sum_probs=29.9

Q ss_pred             Ce-EEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC
Q 018512           43 FK-VAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   78 (354)
Q Consensus        43 ~k-I~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~   78 (354)
                      || |.|+||++.+|.++|..|+..|.  +|++.|+++
T Consensus         1 mkVvlITGas~GIG~aiA~~la~~Ga--~V~~~~~~~   35 (257)
T d1fjha_           1 MSIIVISGCATGIGAATRKVLEAAGH--QIVGIDIRD   35 (257)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESSS
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCC--EEEEEECCh
Confidence            45 47779999999999999999998  899999875

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=92.65  E-value=0.2  Score=40.31  Aligned_cols=96  Identities=15%  Similarity=0.198  Sum_probs=57.5

Q ss_pred             CCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC-chhHHHHHhcCCCCCeEEEEeCCCcHHhhh------CCCc
Q 018512           40 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN-TPGVTADISHMDTGAVVRGFLGQPQLENAL------TGMD  112 (354)
Q Consensus        40 ~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~-~~g~~~dl~~~~~~~~v~~~~~~~d~~~al------~~aD  112 (354)
                      .+.-+|+|+|+ |.+|...++.+...|. ..|+..|.++ ....+.++.-.   ..+. . ...++.+.+      +++|
T Consensus        26 ~~g~~VlI~Ga-G~vGl~~~q~ak~~Ga-~~Vi~~d~~~~r~~~a~~lGa~---~~i~-~-~~~~~~~~v~~~t~g~G~D   98 (174)
T d1jqba2          26 EMGSSVVVIGI-GAVGLMGIAGAKLRGA-GRIIGVGSRPICVEAAKFYGAT---DILN-Y-KNGHIEDQVMKLTNGKGVD   98 (174)
T ss_dssp             CTTCCEEEECC-SHHHHHHHHHHHTTTC-SCEEEECCCHHHHHHHHHHTCS---EEEC-G-GGSCHHHHHHHHTTTSCEE
T ss_pred             CCCCEEEEEcC-Ccchhhhhhhhhcccc-cccccccchhhhHHHHHhhCcc---cccc-c-cchhHHHHHHHHhhccCcc
Confidence            34558999998 9999998888887765 3689999976 22333433310   1111 1 112232222      4699


Q ss_pred             EEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecC
Q 018512          113 LVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISN  160 (354)
Q Consensus       113 vVIi~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tN  160 (354)
                      +||.+.|.+.               .+.+..+.   ..|.+.+++++.
T Consensus        99 ~vid~~g~~~---------------~~~~a~~~---~~~~G~iv~~G~  128 (174)
T d1jqba2          99 RVIMAGGGSE---------------TLSQAVKM---VKPGGIISNINY  128 (174)
T ss_dssp             EEEECSSCTT---------------HHHHHHHH---EEEEEEEEECCC
T ss_pred             eEEEccCCHH---------------HHHHHHHH---HhcCCEEEEEee
Confidence            9999987542               22222222   347888888763

>d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: p-Hydroxybenzoate hydroxylase, PHBH
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=92.63  E-value=0.034  Score=48.17  Aligned_cols=32  Identities=28%  Similarity=0.348  Sum_probs=29.9

Q ss_pred             eEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC
Q 018512           44 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   78 (354)
Q Consensus        44 kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~   78 (354)
                      ||+|||| |-+|.++|..|...|+  ++.++|..+
T Consensus         4 ~V~IvGa-Gp~Gl~~A~~L~~~G~--~v~vlE~~~   35 (292)
T d1k0ia1           4 QVAIIGA-GPSGLLLGQLLHKAGI--DNVILERQT   35 (292)
T ss_dssp             SEEEECC-SHHHHHHHHHHHHHTC--CEEEECSSC
T ss_pred             CEEEECc-CHHHHHHHHHHHHCCC--CEEEEeCCC
Confidence            7999999 9999999999999998  899999875

>d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.53  E-value=0.094  Score=39.98  Aligned_cols=34  Identities=21%  Similarity=0.098  Sum_probs=30.8

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   78 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~   78 (354)
                      +.||+|||| |++|.-+|..|...|.  +|.+++..+
T Consensus        22 pk~vvIvGg-G~iG~E~A~~l~~~G~--~Vtlv~~~~   55 (125)
T d3grsa2          22 PGRSVIVGA-GYIAVEMAGILSALGS--KTSLMIRHD   55 (125)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTC--EEEEECSSS
T ss_pred             CCEEEEEcC-CccHHHHHHHHhcCCc--EEEEEeecc
Confidence            469999999 9999999999998887  999999875

>d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=92.51  E-value=0.07  Score=40.66  Aligned_cols=35  Identities=14%  Similarity=-0.036  Sum_probs=30.0

Q ss_pred             CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC
Q 018512           41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   78 (354)
Q Consensus        41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~   78 (354)
                      .|.|++|||| |.+|.-+|..|...|.  +|.++..++
T Consensus        19 ~P~~vvIIGg-G~iG~E~A~~l~~lG~--~Vtii~~~~   53 (122)
T d1h6va2          19 CPGKTLVVGA-SYVALECAGFLAGIGL--DVTVMVRSI   53 (122)
T ss_dssp             CCCSEEEECC-SHHHHHHHHHHHHTTC--CEEEEESSS
T ss_pred             CCCeEEEECC-CccHHHHHHHHhhcCC--eEEEEEech
Confidence            4458999999 9999999999998887  788887764

>d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Azotobacter vinelandii [TaxId: 354]

Probab=92.42  E-value=0.1  Score=39.41  Aligned_cols=36  Identities=19%  Similarity=0.266  Sum_probs=31.1

Q ss_pred             CCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC
Q 018512           40 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   78 (354)
Q Consensus        40 ~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~   78 (354)
                      ..|.||+|||| |++|.-+|..|...|.  +|.++...+
T Consensus        20 ~~p~~i~IiG~-G~ig~E~A~~l~~~G~--~Vtiv~~~~   55 (119)
T d3lada2          20 NVPGKLGVIGA-GVIGLELGSVWARLGA--EVTVLEAMD   55 (119)
T ss_dssp             SCCSEEEEECC-SHHHHHHHHHHHHTTC--EEEEEESSS
T ss_pred             cCCCeEEEECC-ChHHHHHHHHHHHcCC--ceEEEEeec
Confidence            34569999999 9999999999998887  888888765

>d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=92.35  E-value=0.078  Score=40.24  Aligned_cols=33  Identities=24%  Similarity=0.156  Sum_probs=30.1

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   78 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~   78 (354)
                      .+|+|||| |++|.-+|..|...|.  +|.|++..+
T Consensus        33 ~~vvIiGg-G~iG~E~A~~l~~~g~--~Vtlv~~~~   65 (122)
T d1xhca2          33 GEAIIIGG-GFIGLELAGNLAEAGY--HVKLIHRGA   65 (122)
T ss_dssp             SEEEEEEC-SHHHHHHHHHHHHTTC--EEEEECSSS
T ss_pred             CcEEEECC-cHHHHHHHHHhhcccc--eEEEEeccc
Confidence            38999999 9999999999998887  999999876

>d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase
species: Xanthobacter sp., py2 [TaxId: 35809]

Probab=92.30  E-value=0.098  Score=39.29  Aligned_cols=35  Identities=9%  Similarity=0.100  Sum_probs=30.6

Q ss_pred             CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC
Q 018512           41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   78 (354)
Q Consensus        41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~   78 (354)
                      ++.+|+|+|+ |.+|.-+|..|...+.  ++.+++..+
T Consensus        21 ~~~~vvVvGg-G~ig~E~A~~l~~~g~--~vt~i~~~~   55 (121)
T d1mo9a2          21 PGSTVVVVGG-SKTAVEYGCFFNATGR--RTVMLVRTE   55 (121)
T ss_dssp             CCSEEEEECC-SHHHHHHHHHHHHTTC--EEEEECSSC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhcch--hheEeeccc
Confidence            3469999999 9999999999988876  899999865

>d1rq2a1 c.32.1.1 (A:8-205) Cell-division protein FtsZ {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: Tubulin nucleotide-binding domain-like
superfamily: Tubulin nucleotide-binding domain-like
family: Tubulin, GTPase domain
domain: Cell-division protein FtsZ
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=92.23  E-value=0.12  Score=43.08  Aligned_cols=90  Identities=21%  Similarity=0.293  Sum_probs=56.0

Q ss_pred             eEEEEcCCCchHHHHHHHHHhCCC-CcEEEEEecCCchhHHHHHhcCCCCCeE-------EEE--------------eCC
Q 018512           44 KVAILGAAGGIGQPLAMLMKINPL-VSVLHLYDVVNTPGVTADISHMDTGAVV-------RGF--------------LGQ  101 (354)
Q Consensus        44 kI~IiGa~G~vG~~~a~~l~~~~~-~~ei~L~D~~~~~g~~~dl~~~~~~~~v-------~~~--------------~~~  101 (354)
                      +|-|||- |..|.+++..+...++ ..+++.+|.|.     .+|.......++       ++.              ...
T Consensus         3 ~IkViGv-GGaG~n~vn~~~~~~~~~v~~iainTD~-----~~L~~~~~~~ki~iG~~~t~G~Gagg~p~~g~~aa~e~~   76 (198)
T d1rq2a1           3 VIKVVGI-GGGGVNAVNRMIEQGLKGVEFIAINTDA-----QALLMSDADVKLDVGRDSTRGLGAGADPEVGRKAAEDAK   76 (198)
T ss_dssp             CEEEEEE-HHHHHHHHHHHHHTTCCSEEEEEEESCH-----HHHHHCCCSEEEECCTTTC-----CCCHHHHHHHHHHTH
T ss_pred             eEEEEEe-CchHHHHHHHHHHcCCCCceEEEEcchH-----HHHhcCCcchhhccccccccCCCcCcChhhhHhhHHHHH
Confidence            6888998 8899999999988775 34788888764     112222111111       110              001


Q ss_pred             CcHHhhhCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
Q 018512          102 PQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGI  146 (354)
Q Consensus       102 ~d~~~al~~aDvVIi~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i  146 (354)
                      ....++++++|+||++||.....|       .-=.|++.++++..
T Consensus        77 ~~I~~~l~~~d~vfi~AGlGGgTG-------tGaaPviA~iake~  114 (198)
T d1rq2a1          77 DEIEELLRGADMVFVTAGEGGGTG-------TGGAPVVASIARKL  114 (198)
T ss_dssp             HHHHHHHTTCSEEEEEEETTSSHH-------HHHHHHHHHHHHHH
T ss_pred             HHHHHHhcCCCEEEEEEecCCCCC-------cchHHHHHHHHHHc
Confidence            234678899999999998774332       22357777777765

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=92.22  E-value=0.17  Score=40.30  Aligned_cols=99  Identities=18%  Similarity=0.176  Sum_probs=59.7

Q ss_pred             CCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC-chhHHHHHhcCCCCCeEEEEeCCCcH-HhhhCCCcEEEEc
Q 018512           40 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN-TPGVTADISHMDTGAVVRGFLGQPQL-ENALTGMDLVIIP  117 (354)
Q Consensus        40 ~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~-~~g~~~dl~~~~~~~~v~~~~~~~d~-~~al~~aDvVIi~  117 (354)
                      .+..+|.|+|+ |.+|...++.+...|.  +++.+|.++ ....+.++.   ....+. .....+. +....+.|+|+.+
T Consensus        26 ~~g~~vlI~Ga-G~vG~~a~q~ak~~G~--~vi~~~~~~~k~~~a~~lG---a~~~i~-~~~~~~~~~~~~~~~d~vi~~   98 (168)
T d1piwa2          26 GPGKKVGIVGL-GGIGSMGTLISKAMGA--ETYVISRSSRKREDAMKMG---ADHYIA-TLEEGDWGEKYFDTFDLIVVC   98 (168)
T ss_dssp             STTCEEEEECC-SHHHHHHHHHHHHHTC--EEEEEESSSTTHHHHHHHT---CSEEEE-GGGTSCHHHHSCSCEEEEEEC
T ss_pred             CCCCEEEEECC-CCcchhHHHHhhhccc--cccccccchhHHHHhhccC---CcEEee-ccchHHHHHhhhcccceEEEE
Confidence            34569999998 9999998888777786  888999977 333444443   111121 1111222 3345678999998


Q ss_pred             CCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCC
Q 018512          118 AGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNP  161 (354)
Q Consensus       118 ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNP  161 (354)
                      .+........                ..++-..|.+.+++++-|
T Consensus        99 ~~~~~~~~~~----------------~~~~~l~~~G~iv~~G~~  126 (168)
T d1piwa2          99 ASSLTDIDFN----------------IMPKAMKVGGRIVSISIP  126 (168)
T ss_dssp             CSCSTTCCTT----------------TGGGGEEEEEEEEECCCC
T ss_pred             ecCCccchHH----------------HHHHHhhccceEEEeccc
Confidence            6654322111                123334578888888644

>d1pvva2 c.78.1.1 (A:151-313) Ornithine transcarbamoylase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: ATC-like
superfamily: Aspartate/ornithine carbamoyltransferase
family: Aspartate/ornithine carbamoyltransferase
domain: Ornithine transcarbamoylase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=92.08  E-value=0.4  Score=38.10  Aligned_cols=72  Identities=13%  Similarity=0.098  Sum_probs=47.0

Q ss_pred             CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC--c-hhHHHHHhcCC--CCCeEEEEeCCCcHHhhhCCCcEEE
Q 018512           41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--T-PGVTADISHMD--TGAVVRGFLGQPQLENALTGMDLVI  115 (354)
Q Consensus        41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~-~g~~~dl~~~~--~~~~v~~~~~~~d~~~al~~aDvVI  115 (354)
                      +..||+++|-..+|..+++..+..-|.  ++.+.-...  . ......+....  ....+..+   .|..+|+++||+|.
T Consensus         3 ~gl~Ia~VGD~~nv~~Sli~~l~~~g~--~v~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~---~d~~ea~~~adviy   77 (163)
T d1pvva2           3 KGVKVVYVGDGNNVAHSLMIAGTKLGA--DVVVATPEGYEPDEKVIKWAEQNAAESGGSFELL---HDPVKAVKDADVIY   77 (163)
T ss_dssp             TTCEEEEESCCCHHHHHHHHHHHHTTC--EEEEECCTTCCCCHHHHHHHHHHHHHHTCEEEEE---SCHHHHTTTCSEEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHcCC--eEEEecccccCCChHHHHHHHHhhhcccceEEEe---cCHHHHhhhccEEe
Confidence            467999999966777888887777776  889888754  1 11111111110  12334442   47789999999888


Q ss_pred             Ec
Q 018512          116 IP  117 (354)
Q Consensus       116 i~  117 (354)
                      ..
T Consensus        78 ~~   79 (163)
T d1pvva2          78 TD   79 (163)
T ss_dssp             EC
T ss_pred             ec
Confidence            75

>d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Glycinamide ribonucleotide transformylase PurT, N-domain
species: Escherichia coli [TaxId: 562]

Probab=91.98  E-value=0.13  Score=38.68  Aligned_cols=34  Identities=21%  Similarity=0.299  Sum_probs=30.0

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   78 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~   78 (354)
                      ..||.|+|+ |+.|.-++.....-|+  +++.+|.++
T Consensus        11 ~~kigIlGg-GQL~rMla~aA~~lG~--~v~v~d~~~   44 (111)
T d1kjqa2          11 ATRVMLLGS-GELGKEVAIECQRLGV--EVIAVDRYA   44 (111)
T ss_dssp             CCEEEEESC-SHHHHHHHHHHHTTTC--EEEEEESST
T ss_pred             CCEEEEEeC-CHHHHHHHHHHHHCCC--EEEEEcCCC
Confidence            359999999 9999999998887787  999999875

>d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: N,N-dimethylglycine oxidase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=91.93  E-value=0.06  Score=46.83  Aligned_cols=33  Identities=24%  Similarity=0.311  Sum_probs=29.1

Q ss_pred             eEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC
Q 018512           44 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   78 (354)
Q Consensus        44 kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~   78 (354)
                      +|+|||| |-+|.++|+.|..+|.. +|+|+|.+.
T Consensus         3 dViIIGa-Gi~G~s~A~~La~~G~~-~V~liE~~~   35 (305)
T d1pj5a2           3 RIVIIGA-GIVGTNLADELVTRGWN-NITVLDQGP   35 (305)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHTTCC-CEEEECSSC
T ss_pred             CEEEECc-CHHHHHHHHHHHHcCCC-cEEEEeCCC
Confidence            7999999 99999999999988842 699999864

>d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=91.80  E-value=0.087  Score=40.68  Aligned_cols=25  Identities=24%  Similarity=0.424  Sum_probs=22.3

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCC
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPL   67 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~   67 (354)
                      |||+|.|++|.+|+.++..+...++
T Consensus         1 mki~i~G~~GrMG~~i~~~~~~~~~   25 (128)
T d1vm6a3           1 MKYGIVGYSGRMGQEIQKVFSEKGH   25 (128)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC
T ss_pred             CEEEEECCCCHHHHHHHHHHhcCCC
Confidence            7999999999999999888877776

>d2gz1a1 c.2.1.3 (A:2-127,A:330-357) Aspartate beta-semialdehyde dehydrogenase {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=91.74  E-value=0.076  Score=42.22  Aligned_cols=70  Identities=19%  Similarity=0.397  Sum_probs=44.5

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCC-CCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcCC
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINP-LVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG  119 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~-~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~ag  119 (354)
                      .||+|+||+|++|.-+...|...+ ...++.++..+...|.  .+...  ........ .  .+..+.++|+++++.+
T Consensus         2 ~kVaIvGATGyvG~eLirlL~~H~fp~~~l~~~~s~~s~G~--~~~~~--~~~~~~~~-~--~~~~~~~~d~~f~~~~   72 (154)
T d2gz1a1           2 YTVAVVGATGAVGAQMIKMLEESTLPIDKIRYLASARSAGK--SLKFK--DQDITIEE-T--TETAFEGVDIALFSAG   72 (154)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHTCCSCEEEEEEEECGGGTTC--EEEET--TEEEEEEE-C--CTTTTTTCSEEEECSC
T ss_pred             CEEEEECCCcHHHHHHHHHHHcCCCCceEEEEecccccccc--ccccc--CCcccccc-c--chhhhhhhhhhhhccC
Confidence            489999999999999999888775 3567877765432221  01111  12222221 1  2356789999999853

>d1dxha2 c.78.1.1 (A:151-335) Ornithine transcarbamoylase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: ATC-like
superfamily: Aspartate/ornithine carbamoyltransferase
family: Aspartate/ornithine carbamoyltransferase
domain: Ornithine transcarbamoylase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=91.69  E-value=0.29  Score=39.91  Aligned_cols=72  Identities=17%  Similarity=0.215  Sum_probs=46.9

Q ss_pred             CCCeEEEEcC-CCchHHHHHHHHHhCCCCcEEEEEecCC---chhHHHHHhcCC--CCCeEEEEeCCCcHHhhhCCCcEE
Q 018512           41 AGFKVAILGA-AGGIGQPLAMLMKINPLVSVLHLYDVVN---TPGVTADISHMD--TGAVVRGFLGQPQLENALTGMDLV  114 (354)
Q Consensus        41 ~~~kI~IiGa-~G~vG~~~a~~l~~~~~~~ei~L~D~~~---~~g~~~dl~~~~--~~~~v~~~~~~~d~~~al~~aDvV  114 (354)
                      +..||+++|= ..+|..+++..+..-|.  ++.+.-...   ......++....  ....+..   +.+.++|++++|+|
T Consensus         4 ~~lkia~vGD~~nnV~~Sli~~~~~~G~--~l~l~~P~~~~~~~~~~~~~~~~~~~~~~~~~~---~~d~~eai~~aDvV   78 (185)
T d1dxha2           4 HDISYAYLGDARNNMGNSLLLIGAKLGM--DVRIAAPKALWPHDEFVAQCKKFAEESGAKLTL---TEDPKEAVKGVDFV   78 (185)
T ss_dssp             GGCEEEEESCCSSHHHHHHHHHHHHTTC--EEEEECCGGGSCCHHHHHHHHHHHHHHTCEEEE---ESCHHHHTTTCSEE
T ss_pred             CCCEEEEEcCCcchHHHHHHHHHHHcCC--EEEEEccHHHHhhhHHHHHHHHHhhccCCeEEE---EeChhhccccccEE
Confidence            4579999994 23788888888887776  999998754   122222222110  1234444   35788999999998


Q ss_pred             EEc
Q 018512          115 IIP  117 (354)
Q Consensus       115 Ii~  117 (354)
                      ...
T Consensus        79 yt~   81 (185)
T d1dxha2          79 HTD   81 (185)
T ss_dssp             EEC
T ss_pred             Eee
Confidence            875

>d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: GDI-like N domain
domain: Guanine nucleotide dissociation inhibitor, GDI
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=91.67  E-value=0.072  Score=43.40  Aligned_cols=32  Identities=22%  Similarity=0.236  Sum_probs=29.6

Q ss_pred             eEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC
Q 018512           44 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   78 (354)
Q Consensus        44 kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~   78 (354)
                      -|+|||| |..|.+.|..|...|.  +|.++|.++
T Consensus         7 DviViGa-G~~Gl~~A~~La~~G~--~V~vlE~~~   38 (297)
T d2bcgg1           7 DVIVLGT-GITECILSGLLSVDGK--KVLHIDKQD   38 (297)
T ss_dssp             SEEEECC-SHHHHHHHHHHHHTTC--CEEEECSSS
T ss_pred             CEEEECc-CHHHHHHHHHHHHCCC--CEEEEcCCC
Confidence            4899999 9999999999999998  899999976

>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=91.67  E-value=0.69  Score=36.09  Aligned_cols=118  Identities=15%  Similarity=0.173  Sum_probs=65.2

Q ss_pred             CCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc-hhHHHHHhcCCCCCeEEEEeCCCcH----HhhhCCCcEE
Q 018512           40 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT-PGVTADISHMDTGAVVRGFLGQPQL----ENALTGMDLV  114 (354)
Q Consensus        40 ~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~-~g~~~dl~~~~~~~~v~~~~~~~d~----~~al~~aDvV  114 (354)
                      .+..+|+|.|+ |.+|...+..+...+.  +++..|.++. ...+.++   .. ..+... ...+.    .+...+.|.+
T Consensus        26 ~~g~~vlv~G~-G~iG~~a~~~a~~~g~--~v~~~~~~~~r~~~~k~~---Ga-~~~~~~-~~~~~~~~~~~~~~~~~~~   97 (168)
T d1rjwa2          26 KPGEWVAIYGI-GGLGHVAVQYAKAMGL--NVVAVDIGDEKLELAKEL---GA-DLVVNP-LKEDAAKFMKEKVGGVHAA   97 (168)
T ss_dssp             CTTCEEEEECC-STTHHHHHHHHHHTTC--EEEEECSCHHHHHHHHHT---TC-SEEECT-TTSCHHHHHHHHHSSEEEE
T ss_pred             CCCCEEEEeec-ccchhhhhHHHhcCCC--eEeccCCCHHHhhhhhhc---Cc-ceeccc-ccchhhhhcccccCCCceE
Confidence            34468999998 9999998888888777  8999998652 2222222   21 111111 11232    2335677888


Q ss_pred             EEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCCchHHHHHHHHHhCCCCCCCEEEec
Q 018512          115 IIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVT  188 (354)
Q Consensus       115 Ii~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~~~~~~~~~~p~~kviG~t  188 (354)
                      |++++.+               ..+....+.   ..|.+.+++++.|.+-...-....+.+     ..+++|..
T Consensus        98 v~~~~~~---------------~~~~~a~~~---l~~~G~i~~~g~~~~~~~~~~~~~~~~-----~~~i~gs~  148 (168)
T d1rjwa2          98 VVTAVSK---------------PAFQSAYNS---IRRGGACVLVGLPPEEMPIPIFDTVLN-----GIKIIGSI  148 (168)
T ss_dssp             EESSCCH---------------HHHHHHHHH---EEEEEEEEECCCCSSEEEEEHHHHHHT-----TCEEEECC
T ss_pred             EeecCCH---------------HHHHHHHHH---hccCCceEecccccCCCCCCHHHHHHC-----CcEEEEEe
Confidence            8875422               122222233   347888888865544322111122222     24788874

>d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus sp., strain b0618 [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Sarcosine oxidase
species: Bacillus sp., strain b0618 [TaxId: 1409]

Probab=91.40  E-value=0.077  Score=45.49  Aligned_cols=32  Identities=22%  Similarity=0.378  Sum_probs=29.1

Q ss_pred             eEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC
Q 018512           44 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   78 (354)
Q Consensus        44 kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~   78 (354)
                      -|+|||| |.+|.++|+.|.++|+  +|+|+|...
T Consensus         5 DvvIIGa-Gi~Gls~A~~La~~G~--~V~viE~~~   36 (281)
T d2gf3a1           5 DVIVVGA-GSMGMAAGYQLAKQGV--KTLLVDAFD   36 (281)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTC--CEEEECSSC
T ss_pred             CEEEECc-CHHHHHHHHHHHHCCC--cEEEEeCCC
Confidence            3899999 9999999999999998  899999854

>d1vlva2 c.78.1.1 (A:153-313) Ornithine transcarbamoylase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: ATC-like
superfamily: Aspartate/ornithine carbamoyltransferase
family: Aspartate/ornithine carbamoyltransferase
domain: Ornithine transcarbamoylase
species: Thermotoga maritima [TaxId: 2336]

Probab=91.34  E-value=0.26  Score=39.06  Aligned_cols=72  Identities=21%  Similarity=0.271  Sum_probs=46.6

Q ss_pred             CCCeEEEEc-CCCchHHHHHHHHHhCCCCcEEEEEecCC--c-hhHHHHHhcC--CCCCeEEEEeCCCcHHhhhCCCcEE
Q 018512           41 AGFKVAILG-AAGGIGQPLAMLMKINPLVSVLHLYDVVN--T-PGVTADISHM--DTGAVVRGFLGQPQLENALTGMDLV  114 (354)
Q Consensus        41 ~~~kI~IiG-a~G~vG~~~a~~l~~~~~~~ei~L~D~~~--~-~g~~~dl~~~--~~~~~v~~~~~~~d~~~al~~aDvV  114 (354)
                      +..||+++| +..+|..+++..+..-|.  ++++.-...  . ..........  .....+..   +.|+++|+++||+|
T Consensus         2 ~g~ki~~vGD~~nnV~~Sli~~~~~~g~--~i~~~~P~~~~~~~~~~~~~~~~~~~~~~~i~~---~~d~~~ai~~aDvi   76 (161)
T d1vlva2           2 KGVKVVFMGDTRNNVATSLMIACAKMGM--NFVACGPEELKPRSDVFKRCQEIVKETDGSVSF---TSNLEEALAGADVV   76 (161)
T ss_dssp             TTCEEEEESCTTSHHHHHHHHHHHHTTC--EEEEESCGGGCCCHHHHHHHHHHHHHHCCEEEE---ESCHHHHHTTCSEE
T ss_pred             CCCEEEEEcCCccHHHHHHHHHHHHcCC--EEEEecchhhhhhhhHHHHHHHHHhhcCCceEE---EecHHHhhhhhhhe
Confidence            456999999 435788888888877776  888887654  1 2111111111  01234444   35788999999999


Q ss_pred             EEc
Q 018512          115 IIP  117 (354)
Q Consensus       115 Ii~  117 (354)
                      ...
T Consensus        77 yt~   79 (161)
T d1vlva2          77 YTD   79 (161)
T ss_dssp             EEC
T ss_pred             ecc
Confidence            986

>d3etja2 c.30.1.1 (A:1-78) N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain
species: Escherichia coli [TaxId: 562]

Probab=91.33  E-value=0.085  Score=37.15  Aligned_cols=33  Identities=18%  Similarity=0.209  Sum_probs=28.7

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   78 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~   78 (354)
                      ++|.|+|+ |..|+-++.....-|+  +++.+|.+.
T Consensus         2 k~vgIlG~-GQLgrMl~~Aa~~LG~--~v~vldp~~   34 (78)
T d3etja2           2 KQVCVLGN-GQLGRMLRQAGEPLGI--AVWPVGLDA   34 (78)
T ss_dssp             EEEEEEBC-SHHHHHHHHHHGGGTE--EEEEECTTS
T ss_pred             CEEEEEcC-CHHHHHHHHHHHHcCC--EEEEEcCCC
Confidence            58999999 9999999888776677  999999875

>d1ofua1 c.32.1.1 (A:11-208) Cell-division protein FtsZ {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: Tubulin nucleotide-binding domain-like
superfamily: Tubulin nucleotide-binding domain-like
family: Tubulin, GTPase domain
domain: Cell-division protein FtsZ
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=91.26  E-value=0.15  Score=42.35  Aligned_cols=89  Identities=18%  Similarity=0.281  Sum_probs=54.8

Q ss_pred             eEEEEcCCCchHHHHHHHHHhCCC-CcEEEEEecCCchhHHHHHhcCCCCCeEEE---------------------EeCC
Q 018512           44 KVAILGAAGGIGQPLAMLMKINPL-VSVLHLYDVVNTPGVTADISHMDTGAVVRG---------------------FLGQ  101 (354)
Q Consensus        44 kI~IiGa~G~vG~~~a~~l~~~~~-~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~---------------------~~~~  101 (354)
                      +|.|||- |..|.+++..+...++ ..+++.+|.|.     .+|.......++..                     ....
T Consensus         3 ~IkViGv-GGaG~n~v~~~~~~~~~~v~~iainTD~-----~~L~~~~~~~ki~iG~~~~~g~G~gg~p~~g~~aa~e~~   76 (198)
T d1ofua1           3 VIKVIGV-GGGGGNAVNHMAKNNVEGVEFICANTDA-----QALKNIAARTVLQLGPGVTKGLGAGANPEVGRQAALEDR   76 (198)
T ss_dssp             CEEEEEE-HHHHHHHHHHHHHTTCCSEEEEEEESBT-----GGGSSCSCSEEEECCHHHHTTBCCCSCHHHHHHHHHHTH
T ss_pred             eEEEEEE-CchHHHHHHHHHHcCCCCeEEEEEeCcH-----HHHhcCCccceeccccccccCCCCCCChHHHHHHHHHHH
Confidence            6889998 9999999999988774 34888899876     11222111000100                     0001


Q ss_pred             CcHHhhhCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHH
Q 018512          102 PQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEG  145 (354)
Q Consensus       102 ~d~~~al~~aDvVIi~ag~~~~~g~~r~d~~~~n~~~~~~i~~~  145 (354)
                      ....+.++++|.||++||.....|       ..=.|++.++++.
T Consensus        77 ~~I~~~l~~~d~vfi~AGlGGGTG-------tgaapviA~~ake  113 (198)
T d1ofua1          77 ERISEVLEGADMVFITTGMGGGTG-------TGAAPIIAEVAKE  113 (198)
T ss_dssp             HHHHHHHTTCSEEEEEEETTSSHH-------HHHHHHHHHHHHH
T ss_pred             HHHHHHhCCCCeEEEEecCCCCcc-------ccHHHHHHHHHHH
Confidence            224677899999999998764332       2234666666654

>d1w4xa1 c.3.1.5 (A:10-154,A:390-542) Phenylacetone monooxygenase {Thermobifida fusca [TaxId: 2021]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Phenylacetone monooxygenase
species: Thermobifida fusca [TaxId: 2021]

Probab=91.25  E-value=0.086  Score=46.56  Aligned_cols=36  Identities=17%  Similarity=0.187  Sum_probs=31.9

Q ss_pred             CCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC
Q 018512           40 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   78 (354)
Q Consensus        40 ~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~   78 (354)
                      .+...|+|||| |..|...|..|.+.|+  +++++|..+
T Consensus         5 ~~~~dV~IIGA-G~sGl~~a~~L~~~G~--~v~i~Ek~~   40 (298)
T d1w4xa1           5 PEEVDVLVVGA-GFSGLYALYRLRELGR--SVHVIETAG   40 (298)
T ss_dssp             CSEEEEEEECC-SHHHHHHHHHHHHTTC--CEEEECSSS
T ss_pred             CCCCCEEEECc-cHHHHHHHHHHHhCCC--CEEEEEcCC
Confidence            34468999999 9999999999999888  899999876

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=91.13  E-value=0.71  Score=36.90  Aligned_cols=102  Identities=15%  Similarity=0.183  Sum_probs=60.7

Q ss_pred             CCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC-chhHHHHHhcCCCCCeEEEEeCCCcHHh-----hhCCCcE
Q 018512           40 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN-TPGVTADISHMDTGAVVRGFLGQPQLEN-----ALTGMDL  113 (354)
Q Consensus        40 ~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~-~~g~~~dl~~~~~~~~v~~~~~~~d~~~-----al~~aDv  113 (354)
                      .+.-+|+|+|+ |.+|...++.+...|. ..|+..|.++ ....+.++....   .+.........+.     .-.++|+
T Consensus        27 ~~G~~VlV~G~-G~iGl~a~~~ak~~Ga-~~Vi~~d~~~~r~~~a~~~Ga~~---~i~~~~~~~~~~~~~~~~~~~G~d~  101 (174)
T d1e3ia2          27 TPGSTCAVFGL-GCVGLSAIIGCKIAGA-SRIIAIDINGEKFPKAKALGATD---CLNPRELDKPVQDVITELTAGGVDY  101 (174)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTC-SEEEEECSCGGGHHHHHHTTCSE---EECGGGCSSCHHHHHHHHHTSCBSE
T ss_pred             CCCCEEEEECC-ChHHHHHHHHHHHhCC-ceeeeeccchHHHHHHHHhCCCc---ccCCccchhhhhhhHhhhhcCCCcE
Confidence            34458999998 9999999998888774 3789999987 333444443211   0110000011111     1278999


Q ss_pred             EEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCC-CeEEEEecCCCCC
Q 018512          114 VIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCP-NATVNLISNPVNS  164 (354)
Q Consensus       114 VIi~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p-~a~viv~tNPv~~  164 (354)
                      ||.+.|.+               ..+.   ..++-..| .+.++++..|.+-
T Consensus       102 vie~~G~~---------------~~~~---~a~~~~~~g~G~~v~vG~~~~~  135 (174)
T d1e3ia2         102 SLDCAGTA---------------QTLK---AAVDCTVLGWGSCTVVGAKVDE  135 (174)
T ss_dssp             EEESSCCH---------------HHHH---HHHHTBCTTTCEEEECCCSSSE
T ss_pred             EEEecccc---------------hHHH---HHHHHhhcCCeEEEecCCCCCc
Confidence            99997744               1222   22333346 4788888877653

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=90.98  E-value=0.67  Score=39.79  Aligned_cols=36  Identities=22%  Similarity=0.190  Sum_probs=30.9

Q ss_pred             CCCeEEEEcCCC--chHHHHHHHHHhCCCCcEEEEEecCC
Q 018512           41 AGFKVAILGAAG--GIGQPLAMLMKINPLVSVLHLYDVVN   78 (354)
Q Consensus        41 ~~~kI~IiGa~G--~vG~~~a~~l~~~~~~~ei~L~D~~~   78 (354)
                      +.+++.|+||+|  -+|..+|..|++.|.  +|++.|++.
T Consensus         7 ~gK~alVTGass~~GIG~aiA~~la~~Ga--~Vvi~~~~~   44 (297)
T d1d7oa_           7 RGKRAFIAGIADDNGYGWAVAKSLAAAGA--EILVGTWVP   44 (297)
T ss_dssp             TTCEEEEECCSSSSSHHHHHHHHHHHTTC--EEEEEEEHH
T ss_pred             CCCEEEEECCCCCchHHHHHHHHHHHCCC--EEEEEeCch
Confidence            456899999965  599999999999998  899998764

>d1pg5a2 c.78.1.1 (A:147-299) Aspartate carbamoyltransferase catalytic subunit {Archaeon Sulfolobus acidocaldarius [TaxId: 2285]}

class: Alpha and beta proteins (a/b)
fold: ATC-like
superfamily: Aspartate/ornithine carbamoyltransferase
family: Aspartate/ornithine carbamoyltransferase
domain: Aspartate carbamoyltransferase catalytic subunit
species: Archaeon Sulfolobus acidocaldarius [TaxId: 2285]

Probab=90.90  E-value=0.32  Score=38.25  Aligned_cols=71  Identities=13%  Similarity=0.068  Sum_probs=42.5

Q ss_pred             CCCeEEEEcCCCc--hHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEc
Q 018512           41 AGFKVAILGAAGG--IGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIP  117 (354)
Q Consensus        41 ~~~kI~IiGa~G~--vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~  117 (354)
                      +..||+++|=..+  |..+++..+..-|.  +++++-..+....-.++... ....+..+   .|+++++++||+|..+
T Consensus         2 ~gl~i~~vGD~~~sRv~~Sl~~~l~~~g~--~~~~~~p~~~~~~~~~~~~~-~~~~~~~~---~d~~eai~~aDvvy~~   74 (153)
T d1pg5a2           2 DGLVFALLGDLKYARTVNSLLRILTRFRP--KLVYLISPQLLRARKEILDE-LNYPVKEV---ENPFEVINEVDVLYVT   74 (153)
T ss_dssp             TTCEEEEEECCSSCHHHHHHHHHGGGSCC--SEEEEECCGGGCCCHHHHTT-CCSCEEEE---SCGGGTGGGCSEEEEE
T ss_pred             CCCEEEEECCCCccHHHHHHHHHHHHcCC--eeEEEecccccccchhhccc-CCCeEEEE---eCHHHHhhcCCeEEEe
Confidence            3569999997334  88888888877775  55554443311000111111 12345543   4678999999988776

>d2czca2 c.2.1.3 (A:1-139,A:302-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=90.68  E-value=0.32  Score=39.23  Aligned_cols=78  Identities=15%  Similarity=0.200  Sum_probs=45.9

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhc-CC----CCCeE-----EEEeCCCcHHhhhCCC
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISH-MD----TGAVV-----RGFLGQPQLENALTGM  111 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~-~~----~~~~v-----~~~~~~~d~~~al~~a  111 (354)
                      .+||+|.|- |.+|..++..+..++...-+.+.|..+......-+.. ..    .....     ..+....++.+.+.++
T Consensus         2 ~irIaINGf-GRIGR~v~Ral~~~~dieiVaINd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v   80 (172)
T d2czca2           2 KVKVGVNGY-GTIGKRVAYAVTKQDDMELIGITKTKPDFEAYRAKELGIPVYAASEEFIPRFEKEGFEVAGTLNDLLEKV   80 (172)
T ss_dssp             CEEEEEECC-SHHHHHHHHHHHTCTTEEEEEEEESSCSHHHHHHHHTTCCEEESSGGGHHHHHHHTCCCSCBHHHHHTTC
T ss_pred             cEEEEEECC-CHHHHHHHHHHHhCCCceEEEEecCCChHHHHHhhhcCceeecccccceeeecccCccccchhhhhhccC
Confidence            369999999 9999999998887765544556676552211110111 10    00000     0011123566778899


Q ss_pred             cEEEEcCCC
Q 018512          112 DLVIIPAGV  120 (354)
Q Consensus       112 DvVIi~ag~  120 (354)
                      |+||-+.|.
T Consensus        81 DvViEcTG~   89 (172)
T d2czca2          81 DIIVDATPG   89 (172)
T ss_dssp             SEEEECCST
T ss_pred             CEEEECCCC
Confidence            999998653

>d1i8ta1 c.4.1.3 (A:1-244,A:314-367) UDP-galactopyranose mutase, N-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=90.65  E-value=0.079  Score=46.56  Aligned_cols=33  Identities=21%  Similarity=0.213  Sum_probs=29.9

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   78 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~   78 (354)
                      .+|+|||| |..|.++|..|.+.|.  +|.++|.+.
T Consensus         2 ~dv~IIGa-G~sGl~~A~~L~~~g~--~V~iiEk~~   34 (298)
T d1i8ta1           2 YDYIIVGS-GLFGAVCANELKKLNK--KVLVIEKRN   34 (298)
T ss_dssp             EEEEEECC-SHHHHHHHHHHGGGTC--CEEEECSSS
T ss_pred             ccEEEECC-cHHHHHHHHHHHhCCC--cEEEEECCC
Confidence            47999999 9999999999988887  899999876

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=90.64  E-value=0.71  Score=36.81  Aligned_cols=75  Identities=16%  Similarity=0.189  Sum_probs=46.2

Q ss_pred             CCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc-hhHHHHHhcCCCCCeEEEEeCCCc-HHhhh-----CCCc
Q 018512           40 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT-PGVTADISHMDTGAVVRGFLGQPQ-LENAL-----TGMD  112 (354)
Q Consensus        40 ~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~-~g~~~dl~~~~~~~~v~~~~~~~d-~~~al-----~~aD  112 (354)
                      .+..+|+|+|+ |-+|...+..+...+. .+|+..|.++. ...+.++.   ....+.. ...++ .++..     .+.|
T Consensus        26 ~~G~~VlV~Ga-GgvGl~a~~~ak~~G~-~~Vi~~d~~~~kl~~a~~lG---a~~~i~~-~~~d~~~~~~~~~~~~~G~d   99 (174)
T d1p0fa2          26 TPGSTCAVFGL-GGVGFSAIVGCKAAGA-SRIIGVGTHKDKFPKAIELG---ATECLNP-KDYDKPIYEVICEKTNGGVD   99 (174)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHHTC-SEEEEECSCGGGHHHHHHTT---CSEEECG-GGCSSCHHHHHHHHTTSCBS
T ss_pred             CCCCEEEEECC-CchhHHHHHHHHHcCC-ceeeccCChHHHHHHHHHcC---CcEEEcC-CCchhHHHHHHHHhcCCCCc
Confidence            44458999998 9999999888887774 38999999873 33334332   1111111 11111 22222     5799


Q ss_pred             EEEEcCCC
Q 018512          113 LVIIPAGV  120 (354)
Q Consensus       113 vVIi~ag~  120 (354)
                      +||.+.|.
T Consensus       100 ~vid~~g~  107 (174)
T d1p0fa2         100 YAVECAGR  107 (174)
T ss_dssp             EEEECSCC
T ss_pred             EEEEcCCC
Confidence            99998753

>d1b7go1 c.2.1.3 (O:1-138,O:301-340) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=90.51  E-value=0.2  Score=40.84  Aligned_cols=78  Identities=17%  Similarity=0.190  Sum_probs=45.0

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchh-HHHHHhcCC---CCCeEE-----EEeCCCcHHhhhCCCc
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPG-VTADISHMD---TGAVVR-----GFLGQPQLENALTGMD  112 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g-~~~dl~~~~---~~~~v~-----~~~~~~d~~~al~~aD  112 (354)
                      +.||+|.|- |.+|..++..+..++-..-+.+.|..+... ...-..+..   ......     .+....++...+.++|
T Consensus         1 MIKVaINGf-GRIGR~v~Ral~~~~dievVaInd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~g~~~~~~~~vD   79 (178)
T d1b7go1           1 MVNVAVNGY-GTIGKRVADAIIKQPDMKLVGVAKTSPNYEAFIAHRRGIRIYVPQQSIKKFEESGIPVAGTVEDLIKTSD   79 (178)
T ss_dssp             CEEEEEECC-SHHHHHHHHHHHTCTTEEEEEEECSSCSHHHHHHHHTTCCEECCGGGHHHHHTTTCCCCCCHHHHHHHCS
T ss_pred             CeEEEEECC-CHHHHHHHHHHHhCCCCEEEEEECCCCcHHHHHhcccCcceeccCccceeccccceecCCchhhhhhcCC
Confidence            359999998 999999999998877543344456554211 111011110   000000     0011235677788999


Q ss_pred             EEEEcCCC
Q 018512          113 LVIIPAGV  120 (354)
Q Consensus       113 vVIi~ag~  120 (354)
                      +||.+.|.
T Consensus        80 iViecTG~   87 (178)
T d1b7go1          80 IVVDTTPN   87 (178)
T ss_dssp             EEEECCST
T ss_pred             EEEECCCC
Confidence            99998653

>d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=90.47  E-value=0.16  Score=38.71  Aligned_cols=37  Identities=19%  Similarity=0.261  Sum_probs=32.1

Q ss_pred             CCCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC
Q 018512           39 GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   78 (354)
Q Consensus        39 ~~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~   78 (354)
                      +..+.+++|||| |.+|.-+|..+...|.  ++.+++..+
T Consensus        23 ~~~p~~vvIiGg-G~IG~E~A~~~~~~G~--~Vtive~~~   59 (125)
T d1ojta2          23 KEVPGKLLIIGG-GIIGLEMGTVYSTLGS--RLDVVEMMD   59 (125)
T ss_dssp             CCCCSEEEEESC-SHHHHHHHHHHHHHTC--EEEEECSSS
T ss_pred             cccCCeEEEECC-CHHHHHHHHHhhcCCC--EEEEEEeec
Confidence            455679999999 9999999999988887  999998765

>d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=90.38  E-value=0.12  Score=39.28  Aligned_cols=37  Identities=16%  Similarity=0.205  Sum_probs=31.9

Q ss_pred             CCCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC
Q 018512           39 GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   78 (354)
Q Consensus        39 ~~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~   78 (354)
                      +..|.+++|||| |.+|.-+|..+...|.  +|.++...+
T Consensus        22 ~~~p~~~viiG~-G~iglE~A~~~~~~G~--~Vtvi~~~~   58 (123)
T d1dxla2          22 SEIPKKLVVIGA-GYIGLEMGSVWGRIGS--EVTVVEFAS   58 (123)
T ss_dssp             SSCCSEEEESCC-SHHHHHHHHHHHHHTC--EEEEECSSS
T ss_pred             cccCCeEEEEcc-chHHHHHHHHHHhcCC--eEEEEEEcc
Confidence            344569999999 9999999999998887  999998865

>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=90.13  E-value=0.74  Score=37.03  Aligned_cols=124  Identities=12%  Similarity=0.111  Sum_probs=67.6

Q ss_pred             CcchhHHHHHHHHHHhccCCCcccchhhhhhhhcccCCCCCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC-c
Q 018512            1 MEFSSEANQRIARISAHLYPPNLQENSCLRQAKCRAKGGAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN-T   79 (354)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~-~   79 (354)
                      |.|.+.|+.-.+-+-+|+         ++..+..+. ...+..+|.|.||+|-||+...+.....|.  +++-...++ .
T Consensus         1 lS~~eAAal~~aglTA~~---------a~~~L~~~g-~~~~g~~VLI~gaaGGVG~~aiQlak~~Ga--~Viat~~s~~k   68 (176)
T d1xa0a2           1 LTLKEAMAIGTAGFTAAL---------SIHRLEEHG-LTPERGPVLVTGATGGVGSLAVSMLAKRGY--TVEASTGKAAE   68 (176)
T ss_dssp             CCHHHHHHHHHHHHHHHH---------HHHHHHHTT-CCGGGCCEEESSTTSHHHHHHHHHHHHTTC--CEEEEESCTTC
T ss_pred             CCHHHHHHhhhHHHHHHH---------HHHHHHHhC-CCCCCCEEEEEeccchHHHHHHHHHHHcCC--ceEEecCchHH
Confidence            456777777766666654         222211111 112234799999999999999998888887  666666654 2


Q ss_pred             hhHHHHHhcCCCCCeEEEEeCCCcHHhh-----hCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeE
Q 018512           80 PGVTADISHMDTGAVVRGFLGQPQLENA-----LTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNAT  154 (354)
Q Consensus        80 ~g~~~dl~~~~~~~~v~~~~~~~d~~~a-----l~~aDvVIi~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~  154 (354)
                      ...+.++.   ....+.   .+.+..+.     =++.|+||-+.|-.     +              +.+.++-..|.+.
T Consensus        69 ~~~~~~lG---a~~vi~---~~~~~~~~~~~~~~~gvD~vid~vgg~-----~--------------~~~~l~~l~~~Gr  123 (176)
T d1xa0a2          69 HDYLRVLG---AKEVLA---REDVMAERIRPLDKQRWAAAVDPVGGR-----T--------------LATVLSRMRYGGA  123 (176)
T ss_dssp             HHHHHHTT---CSEEEE---CC---------CCSCCEEEEEECSTTT-----T--------------HHHHHHTEEEEEE
T ss_pred             HHHHHhcc---cceeee---cchhHHHHHHHhhccCcCEEEEcCCch-----h--------------HHHHHHHhCCCce
Confidence            22333332   111111   11111111     15789988876522     1              2223334458898


Q ss_pred             EEEecCC
Q 018512          155 VNLISNP  161 (354)
Q Consensus       155 viv~tNP  161 (354)
                      ++.+++.
T Consensus       124 iv~~G~~  130 (176)
T d1xa0a2         124 VAVSGLT  130 (176)
T ss_dssp             EEECSCC
T ss_pred             EEEeecc
Confidence            8888643

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=90.12  E-value=0.13  Score=42.98  Aligned_cols=34  Identities=21%  Similarity=0.358  Sum_probs=30.9

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   78 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~   78 (354)
                      +++.|+||++.+|..+|..|+..|.  +|++.|+++
T Consensus         2 K~alITGas~GIG~aiA~~la~~Ga--~V~i~~~~~   35 (241)
T d1uaya_           2 RSALVTGGASGLGRAAALALKARGY--RVVVLDLRR   35 (241)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHTC--EEEEEESSC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCC--EEEEEECCc
Confidence            3678889999999999999999998  999999876

>d2at2a2 c.78.1.1 (A:145-295) Aspartate carbamoyltransferase catalytic subunit {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: ATC-like
superfamily: Aspartate/ornithine carbamoyltransferase
family: Aspartate/ornithine carbamoyltransferase
domain: Aspartate carbamoyltransferase catalytic subunit
species: Bacillus subtilis [TaxId: 1423]

Probab=90.10  E-value=0.26  Score=38.86  Aligned_cols=62  Identities=13%  Similarity=0.183  Sum_probs=42.0

Q ss_pred             CCeEEEEcC--CCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEc
Q 018512           42 GFKVAILGA--AGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIP  117 (354)
Q Consensus        42 ~~kI~IiGa--~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~  117 (354)
                      .+||+++|=  .+.|..+++..+..-|.  ++++......       ...  ...+..+   .+++++++++|+|..+
T Consensus         3 gl~i~~vGD~~~srv~~Sl~~~~~~~g~--~~~i~~P~~~-------~~~--~~~~~~~---~~~~ea~~~aDviy~~   66 (151)
T d2at2a2           3 GLTVSIHGDIKHSRVARSNAEVLTRLGA--RVLFSGPSEW-------QDE--ENTFGTY---VSMDEAVESSDVVMLL   66 (151)
T ss_pred             CCEEEEEcCCCCCHHHHHHHHHHHHcCC--cccccCCchh-------hcc--ccceeEE---EechhccccCceeeee
Confidence            579999997  45689898888877676  7777766431       100  0123332   3567999999998875

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=90.07  E-value=0.44  Score=38.99  Aligned_cols=75  Identities=16%  Similarity=0.182  Sum_probs=45.7

Q ss_pred             CCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc-hhHHHHHhcCCCCCeEEEEeCCCcHHhhh------CCCc
Q 018512           40 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT-PGVTADISHMDTGAVVRGFLGQPQLENAL------TGMD  112 (354)
Q Consensus        40 ~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~-~g~~~dl~~~~~~~~v~~~~~~~d~~~al------~~aD  112 (354)
                      .+..+|+|+|+ |.+|...+..+...+. ..|+..|.++. ...+.++   .  ..........++.+.+      .++|
T Consensus        24 ~~G~tVlV~Ga-G~vGl~a~~~ak~~ga-~~Vi~~d~~~~rl~~a~~~---G--a~~~~~~~~~~~~~~i~~~t~g~g~D   96 (195)
T d1kola2          24 GPGSTVYVAGA-GPVGLAAAASARLLGA-AVVIVGDLNPARLAHAKAQ---G--FEIADLSLDTPLHEQIAALLGEPEVD   96 (195)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTC-SEEEEEESCHHHHHHHHHT---T--CEEEETTSSSCHHHHHHHHHSSSCEE
T ss_pred             CCCCEEEEECc-CHHHHHHHHHHHhhcc-cceeeecccchhhHhhhhc---c--ccEEEeCCCcCHHHHHHHHhCCCCcE
Confidence            34458999998 9999887777766664 38999998762 2222222   1  1211111123333322      4799


Q ss_pred             EEEEcCCCC
Q 018512          113 LVIIPAGVP  121 (354)
Q Consensus       113 vVIi~ag~~  121 (354)
                      ++|.+.|.+
T Consensus        97 ~vid~vG~~  105 (195)
T d1kola2          97 CAVDAVGFE  105 (195)
T ss_dssp             EEEECCCTT
T ss_pred             EEEECcccc
Confidence            999988754

>d1yovb1 c.111.1.2 (B:12-437) UBA3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: UBA3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.74  E-value=0.13  Score=47.96  Aligned_cols=34  Identities=29%  Similarity=0.534  Sum_probs=30.7

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   78 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~   78 (354)
                      .||.|||+ |.+|+.++..|+..|.. +|.|+|.+.
T Consensus        38 ~kVlvvG~-GglG~ei~k~L~~~Gvg-~i~lvD~D~   71 (426)
T d1yovb1          38 CKVLVIGA-GGLGCELLKNLALSGFR-QIHVIDMDT   71 (426)
T ss_dssp             CCEEEECS-STTHHHHHHHHHTTTCC-CEEEECCCB
T ss_pred             CeEEEECC-CHHHHHHHHHHHHcCCC-eEEEEECCC
Confidence            48999999 99999999999999864 899999875

>d2dt5a2 c.2.1.12 (A:78-203) Transcriptional repressor Rex, C-terminal domain {Thermus aquaticus [TaxId: 271]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Transcriptional repressor Rex, C-terminal domain
domain: Transcriptional repressor Rex, C-terminal domain
species: Thermus aquaticus [TaxId: 271]

Probab=89.72  E-value=0.072  Score=40.94  Aligned_cols=36  Identities=22%  Similarity=0.367  Sum_probs=28.2

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   78 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~   78 (354)
                      +.+|+|+|| |+.|..++..+....-..-+.++|.++
T Consensus         3 ~~~v~I~Ga-G~~G~~l~~~l~~~~~~~iv~fiDdd~   38 (126)
T d2dt5a2           3 KWGLCIVGM-GRLGSALADYPGFGESFELRGFFDVDP   38 (126)
T ss_dssp             CEEEEEECC-SHHHHHHHHCSCCCSSEEEEEEEESCT
T ss_pred             CceEEEEcC-CHHHHHHHHhHhhcCCcEEEEEEeCch
Confidence            458999999 999999987664444345688999886

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=89.21  E-value=0.22  Score=39.85  Aligned_cols=96  Identities=18%  Similarity=0.224  Sum_probs=55.5

Q ss_pred             CCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC-chhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcC
Q 018512           40 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN-TPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA  118 (354)
Q Consensus        40 ~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~-~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~a  118 (354)
                      .+..+|.|.||+|.+|+..+..+...|.  +++..+.++ ....+.+   ... ..+..+....+....-+++|+||-+.
T Consensus        26 ~~g~~VlI~ga~G~vG~~aiqlak~~G~--~vi~~~~~~~~~~~~~~---lGa-~~~i~~~~~~~~~~~~~g~D~v~d~~   99 (171)
T d1iz0a2          26 RPGEKVLVQAAAGALGTAAVQVARAMGL--RVLAAASRPEKLALPLA---LGA-EEAATYAEVPERAKAWGGLDLVLEVR   99 (171)
T ss_dssp             CTTCEEEESSTTBHHHHHHHHHHHHTTC--EEEEEESSGGGSHHHHH---TTC-SEEEEGGGHHHHHHHTTSEEEEEECS
T ss_pred             CCCCEEEEEeccccchhhhhhhhccccc--ccccccccccccccccc---ccc-ceeeehhhhhhhhhcccccccccccc
Confidence            3455899999889999999998888887  777777755 2222232   222 11211111011123457899999876


Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCC
Q 018512          119 GVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNP  161 (354)
Q Consensus       119 g~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNP  161 (354)
                      |.      +    +       .   ..++-..|.+.++.+++|
T Consensus       100 G~------~----~-------~---~~~~~l~~~G~~v~~G~~  122 (171)
T d1iz0a2         100 GK------E----V-------E---ESLGLLAHGGRLVYIGAA  122 (171)
T ss_dssp             CT------T----H-------H---HHHTTEEEEEEEEEC---
T ss_pred             ch------h----H-------H---HHHHHHhcCCcEEEEeCC
Confidence            51      1    1       1   123444578888887554

>d1duvg2 c.78.1.1 (G:151-333) Ornithine transcarbamoylase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: ATC-like
superfamily: Aspartate/ornithine carbamoyltransferase
family: Aspartate/ornithine carbamoyltransferase
domain: Ornithine transcarbamoylase
species: Escherichia coli [TaxId: 562]

Probab=88.97  E-value=1.1  Score=36.14  Aligned_cols=70  Identities=11%  Similarity=0.237  Sum_probs=45.1

Q ss_pred             CCeEEEEcC-CCchHHHHHHHHHhCCCCcEEEEEecCC---chhH---HHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEE
Q 018512           42 GFKVAILGA-AGGIGQPLAMLMKINPLVSVLHLYDVVN---TPGV---TADISHMDTGAVVRGFLGQPQLENALTGMDLV  114 (354)
Q Consensus        42 ~~kI~IiGa-~G~vG~~~a~~l~~~~~~~ei~L~D~~~---~~g~---~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvV  114 (354)
                      ..||+++|= ..+|..+++..+..-|.  +++++-...   ....   +.+.... ....+..   +.+.+++++++|+|
T Consensus         5 ~l~i~~vGD~~nnv~~Sli~~~~~~g~--~l~~~~P~~~~~~~~~~~~~~~~~~~-~g~~~~~---~~d~~~a~~~aDvv   78 (183)
T d1duvg2           5 EMTLVYAGDARNNMGNSMLEAAALTGL--DLRLVAPQACWPEAALVTECRALAQQ-NGGNITL---TEDVAKGVEGADFI   78 (183)
T ss_dssp             GCEEEEESCTTSHHHHHHHHHHHHHCC--EEEEECCGGGCCCHHHHHHHHHHHHH-TTCEEEE---ESCHHHHHTTCSEE
T ss_pred             CCEEEEEcCCccHHHHHHHHHHHHcCC--EEEEEechHhhhhHHHHHHHHHHHHh-cCCceEE---EechhhccccCCEE
Confidence            469999994 13677888777776676  899888754   1111   1222211 1233443   35788999999999


Q ss_pred             EEc
Q 018512          115 IIP  117 (354)
Q Consensus       115 Ii~  117 (354)
                      ...
T Consensus        79 yt~   81 (183)
T d1duvg2          79 YTD   81 (183)
T ss_dssp             EEC
T ss_pred             EEE
Confidence            886

>d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Potassium channel-related protein MthK
species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]

Probab=88.97  E-value=0.63  Score=35.01  Aligned_cols=94  Identities=13%  Similarity=0.067  Sum_probs=55.4

Q ss_pred             eEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcH----HhhhCCCcEEEEcCC
Q 018512           44 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQL----ENALTGMDLVIIPAG  119 (354)
Q Consensus        44 kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~----~~al~~aDvVIi~ag  119 (354)
                      +|.|+|. |.+|..++..|.  +.  +++++|.++....  .+..... ..+.+  ..++.    +..+..|+.+|++..
T Consensus         2 HivI~G~-g~~g~~l~~~L~--~~--~i~vi~~d~~~~~--~~~~~~~-~~i~G--d~~~~~~L~~a~i~~A~~vi~~~~   71 (129)
T d2fy8a1           2 HVVICGW-SESTLECLRELR--GS--EVFVLAEDENVRK--KVLRSGA-NFVHG--DPTRVSDLEKANVRGARAVIVNLE   71 (129)
T ss_dssp             CEEEESC-CHHHHHHHHTSC--GG--GEEEEESCTTHHH--HHHHTTC-EEEES--CTTSHHHHHHTTCTTCSEEEECCS
T ss_pred             EEEEECC-CHHHHHHHHHHc--CC--CCEEEEcchHHHH--HHHhcCc-ccccc--ccCCHHHHHHhhhhcCcEEEEecc
Confidence            6899998 999999999874  33  5778888773222  2222221 11221  12222    234688999999732


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec-CCC
Q 018512          120 VPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS-NPV  162 (354)
Q Consensus       120 ~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~t-NPv  162 (354)
                      .         |  ..|+.    ++..+++.+|+..++.-+ +|-
T Consensus        72 ~---------d--~~n~~----~~~~~r~~~~~~~iia~~~~~~  100 (129)
T d2fy8a1          72 S---------D--SETIH----CILGIRKIDESVRIIAEAERYE  100 (129)
T ss_dssp             S---------H--HHHHH----HHHHHHHHCSSSCEEEECSSGG
T ss_pred             c---------h--hhhHH----HHHHHHHHCCCceEEEEEcCHH
Confidence            1         1  33443    344567788987666555 444

>d2i0za1 c.3.1.8 (A:1-192,A:362-420) Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Flavoprotein BC4706
species: Bacillus cereus [TaxId: 1396]

Probab=88.95  E-value=0.17  Score=42.39  Aligned_cols=32  Identities=25%  Similarity=0.217  Sum_probs=29.5

Q ss_pred             eEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC
Q 018512           44 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   78 (354)
Q Consensus        44 kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~   78 (354)
                      -|+|||| |..|...|..|.+.|+  +|+|+|...
T Consensus         4 DViIIGa-G~aGl~aA~~la~~G~--~V~liEk~~   35 (251)
T d2i0za1           4 DVIVIGG-GPSGLMAAIGAAEEGA--NVLLLDKGN   35 (251)
T ss_dssp             SEEEECC-SHHHHHHHHHHHHTTC--CEEEECSSS
T ss_pred             CEEEECc-CHHHHHHHHHHHHCCC--cEEEEeCCC
Confidence            4899999 9999999999999998  899999876

>d2v5za1 c.3.1.2 (A:6-289,A:402-500) Monoamine oxidase B {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Monoamine oxidase B
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.90  E-value=0.16  Score=43.96  Aligned_cols=31  Identities=23%  Similarity=0.333  Sum_probs=28.5

Q ss_pred             EEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC
Q 018512           45 VAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   78 (354)
Q Consensus        45 I~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~   78 (354)
                      |+|||| |..|.+.|..|.+.|+  +|+++|...
T Consensus         2 ViVIGa-G~aGL~aA~~L~~~G~--~V~VlE~~~   32 (383)
T d2v5za1           2 VVVVGG-GISGMAAAKLLHDSGL--NVVVLEARD   32 (383)
T ss_dssp             EEEECC-BHHHHHHHHHHHHTTC--CEEEEESSS
T ss_pred             EEEECC-CHHHHHHHHHHHhCCC--CEEEEecCC
Confidence            799999 9999999999999998  899999754

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=88.57  E-value=2.6  Score=33.31  Aligned_cols=76  Identities=13%  Similarity=0.114  Sum_probs=46.7

Q ss_pred             CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC-chhHHHHHhcCCCCCeEEEEeCCCcHH---h--hhCCCcEE
Q 018512           41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN-TPGVTADISHMDTGAVVRGFLGQPQLE---N--ALTGMDLV  114 (354)
Q Consensus        41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~-~~g~~~dl~~~~~~~~v~~~~~~~d~~---~--al~~aDvV  114 (354)
                      +.-.|+|+|+ |-+|...+..+...+. .+|+.+|.++ ....+.++.-.   ..+.....+...+   +  .=.++|+|
T Consensus        29 ~g~tVlI~G~-GgvGl~ai~~ak~~G~-~~Vi~vd~~~~kl~~Ak~~GA~---~~in~~~~~~~~~~~~~~~~g~G~d~v  103 (176)
T d1d1ta2          29 PGSTCVVFGL-GGVGLSVIMGCKSAGA-SRIIGIDLNKDKFEKAMAVGAT---ECISPKDSTKPISEVLSEMTGNNVGYT  103 (176)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTC-SEEEEECSCGGGHHHHHHHTCS---EEECGGGCSSCHHHHHHHHHTSCCCEE
T ss_pred             CCCEEEEECC-CchhHHHHHHHHHcCC-ceEEEecCcHHHHHHHHhcCCc---EEECccccchHHHHHHHHhccccceEE
Confidence            3447999998 9999999988888775 3899999987 33344444321   1111100011111   1  12689999


Q ss_pred             EEcCCCC
Q 018512          115 IIPAGVP  121 (354)
Q Consensus       115 Ii~ag~~  121 (354)
                      |.+.|.+
T Consensus       104 i~~~g~~  110 (176)
T d1d1ta2         104 FEVIGHL  110 (176)
T ss_dssp             EECSCCH
T ss_pred             EEeCCch
Confidence            9986533

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=88.24  E-value=0.74  Score=36.53  Aligned_cols=73  Identities=18%  Similarity=0.246  Sum_probs=45.7

Q ss_pred             CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhh------CCCcEE
Q 018512           41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENAL------TGMDLV  114 (354)
Q Consensus        41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al------~~aDvV  114 (354)
                      +..+|.|+||+|.+|...++.+...+.  +++..+.++.+  ...+..... ..+-.. ...++.+.+      +++|+|
T Consensus        25 ~g~~VlI~ga~g~vG~~~iqla~~~g~--~vi~~~~~~~~--~~~l~~~Ga-~~vi~~-~~~~~~~~v~~~t~~~g~d~v   98 (183)
T d1pqwa_          25 PGERVLIHSATGGVGMAAVSIAKMIGA--RIYTTAGSDAK--REMLSRLGV-EYVGDS-RSVDFADEILELTDGYGVDVV   98 (183)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHHTC--EEEEEESSHHH--HHHHHTTCC-SEEEET-TCSTHHHHHHHHTTTCCEEEE
T ss_pred             CCCEEEEECCCCCcccccchhhccccc--cceeeeccccc--ccccccccc-cccccC-CccCHHHHHHHHhCCCCEEEE
Confidence            345899999989999999988887776  77777654321  122333322 222211 234554544      679999


Q ss_pred             EEcCC
Q 018512          115 IIPAG  119 (354)
Q Consensus       115 Ii~ag  119 (354)
                      +-+.|
T Consensus        99 ~d~~g  103 (183)
T d1pqwa_          99 LNSLA  103 (183)
T ss_dssp             EECCC
T ss_pred             Eeccc
Confidence            99865

>d1yova1 c.111.1.2 (A:6-534) Amyloid beta precursor protein-binding protein 1, APPBP1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: Amyloid beta precursor protein-binding protein 1, APPBP1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.70  E-value=0.85  Score=43.26  Aligned_cols=34  Identities=12%  Similarity=0.162  Sum_probs=30.3

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   78 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~   78 (354)
                      .||+|+|+ |.+|+.++..|+..|.. .+.|+|.+.
T Consensus        26 s~VlvvG~-gglG~Ei~knLvl~GVg-~itivD~d~   59 (529)
T d1yova1          26 AHVCLINA-TATGTEILKNLVLPGIG-SFTIIDGNQ   59 (529)
T ss_dssp             CEEEECCC-SHHHHHHHHHHHTTTCS-EEEEECCSB
T ss_pred             CCEEEECC-CHHHHHHHHHHHHhcCC-EEEEEcCCc
Confidence            48999999 99999999999998864 899999864

>d1feca2 c.3.1.5 (A:170-286) Trypanothione reductase {Crithidia fasciculata [TaxId: 5656]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Crithidia fasciculata [TaxId: 5656]

Probab=87.64  E-value=0.36  Score=35.81  Aligned_cols=37  Identities=16%  Similarity=0.067  Sum_probs=28.8

Q ss_pred             CCCeEEEEcCCCchHHHHHHHHHhC-CCCcEEEEEecCC
Q 018512           41 AGFKVAILGAAGGIGQPLAMLMKIN-PLVSVLHLYDVVN   78 (354)
Q Consensus        41 ~~~kI~IiGa~G~vG~~~a~~l~~~-~~~~ei~L~D~~~   78 (354)
                      .|.||+|||| |.+|.-+|..+... ....+|.+++..+
T Consensus        17 ~p~~v~IiGg-G~ig~E~A~~l~~~~~~g~~Vtli~~~~   54 (117)
T d1feca2          17 APKRALCVGG-GYISIEFAGIFNAYKARGGQVDLAYRGD   54 (117)
T ss_dssp             CCSEEEEECS-SHHHHHHHHHHHHHSCTTCEEEEEESSS
T ss_pred             cCCeEEEECC-ChHHHHHHHHhHhhcccccccceecccc
Confidence            3569999999 99999999766543 3345999999865

>d1xhca1 c.3.1.5 (A:1-103,A:226-289) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=87.52  E-value=0.29  Score=38.22  Aligned_cols=31  Identities=29%  Similarity=0.305  Sum_probs=25.9

Q ss_pred             eEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC
Q 018512           44 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   78 (354)
Q Consensus        44 kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~   78 (354)
                      ||+|||| |++|..+|..|.. +.  +|.+++..+
T Consensus         2 rVvIIGg-G~~G~e~A~~l~~-~~--~Vtvv~~~~   32 (167)
T d1xhca1           2 KVVIVGN-GPGGFELAKQLSQ-TY--EVTVIDKEP   32 (167)
T ss_dssp             EEEEECC-SHHHHHHHHHHTT-TS--EEEEECSSS
T ss_pred             eEEEECC-cHHHHHHHHHHHc-CC--CEEEEeccc
Confidence            8999999 9999999988854 43  899998753

>d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase-like protein HI0607
species: Haemophilus influenzae [TaxId: 727]

Probab=87.51  E-value=0.32  Score=38.81  Aligned_cols=36  Identities=22%  Similarity=0.378  Sum_probs=30.7

Q ss_pred             CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC
Q 018512           41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   78 (354)
Q Consensus        41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~   78 (354)
                      +..||+|+|+ |.++.++++.|...+. .+|.+++++.
T Consensus        16 ~~~~vlIlGa-GGaarai~~aL~~~g~-~~I~I~nR~~   51 (167)
T d1npya1          16 KNAKVIVHGS-GGMAKAVVAAFKNSGF-EKLKIYARNV   51 (167)
T ss_dssp             TTSCEEEECS-STTHHHHHHHHHHTTC-CCEEEECSCH
T ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCC-CEEEEecccH
Confidence            3468999999 9999999999998875 3799999875

>d2d59a1 c.2.1.8 (A:4-142) Hypothetical protein PH1109 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PH1109
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=87.39  E-value=3.5  Score=31.50  Aligned_cols=107  Identities=8%  Similarity=0.035  Sum_probs=62.5

Q ss_pred             CeEEEEcCC---CchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcCC
Q 018512           43 FKVAILGAA---GGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG  119 (354)
Q Consensus        43 ~kI~IiGa~---G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~ag  119 (354)
                      .+|+||||+   +..|..++..|...|.  +|+.+.....     ++.-      ...+   .++.+.-...|+|++...
T Consensus        20 ksIAVVGaS~~~~~~g~~v~~~L~~~g~--~v~pVnP~~~-----~i~G------~~~~---~sl~dlp~~iD~v~i~vp   83 (139)
T d2d59a1          20 KKIALVGASPKPERDANIVMKYLLEHGY--DVYPVNPKYE-----EVLG------RKCY---PSVLDIPDKIEVVDLFVK   83 (139)
T ss_dssp             CEEEEETCCSCTTSHHHHHHHHHHHTTC--EEEEECTTCS-----EETT------EECB---SSGGGCSSCCSEEEECSC
T ss_pred             CeEEEEeecCCCCCchHHHHHHHHHCCC--EEEEECCccc-----ccCC------Cccc---ccccccCccceEEEEEeC
Confidence            389999996   4689999999999888  8888876431     0110      1111   234333346899888731


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCCchHHHHHHHHHhCCCCCCCEEEe-cc
Q 018512          120 VPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TM  189 (354)
Q Consensus       120 ~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~~~~~~~~~~p~~kviG~-t~  189 (354)
                                      .+.+.++.+++.+.+++++++..+.-.+..    .+.+.+ .|+   +++|= |.
T Consensus        84 ----------------~~~~~~~~~e~~~~g~k~v~~~~G~~~ee~----~~~a~~-~gi---~vig~~C~  130 (139)
T d2d59a1          84 ----------------PKLTMEYVEQAIKKGAKVVWFQYNTYNREA----SKKADE-AGL---IIVANRCM  130 (139)
T ss_dssp             ----------------HHHHHHHHHHHHHHTCSEEEECTTCCCHHH----HHHHHH-TTC---EEEESCCH
T ss_pred             ----------------HHHHHHHHHHHHHhCCCEEEEeccccCHHH----HHHHHH-CCC---EEEcCCcC
Confidence                            235556666666677776554333222222    233333 343   78886 73

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=87.35  E-value=0.75  Score=36.38  Aligned_cols=71  Identities=17%  Similarity=0.077  Sum_probs=46.1

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc-hhHHHHHhcCCCCCeEEEEeCCCcHHhhh------CCCcEE
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT-PGVTADISHMDTGAVVRGFLGQPQLENAL------TGMDLV  114 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~-~g~~~dl~~~~~~~~v~~~~~~~d~~~al------~~aDvV  114 (354)
                      ..+|+|+||+|.+|...++.+...|.  +++..|.++. ...+.++.   . ..+-.. .+.|+.+.+      ++.|+|
T Consensus        29 g~~Vlv~ga~g~vG~~~iqlak~~Ga--~Vi~~~~s~~k~~~~~~lG---a-~~vi~~-~~~d~~~~v~~~t~g~g~d~v  101 (179)
T d1qora2          29 DEQFLFHAAAGGVGLIACQWAKALGA--KLIGTVGTAQKAQSALKAG---A-WQVINY-REEDLVERLKEITGGKKVRVV  101 (179)
T ss_dssp             TCEEEESSTTBHHHHHHHHHHHHHTC--EEEEEESSHHHHHHHHHHT---C-SEEEET-TTSCHHHHHHHHTTTCCEEEE
T ss_pred             CCEEEEEccccccchHHHHHHHHhCC--eEeecccchHHHHHHHhcC---C-eEEEEC-CCCCHHHHHHHHhCCCCeEEE
Confidence            35899999988899999998888887  8999998762 22233332   2 112111 234554444      467988


Q ss_pred             EEcCC
Q 018512          115 IIPAG  119 (354)
Q Consensus       115 Ii~ag  119 (354)
                      +-+.|
T Consensus       102 ~d~~g  106 (179)
T d1qora2         102 YDSVG  106 (179)
T ss_dssp             EECSC
T ss_pred             EeCcc
Confidence            88764

>d1q1ra1 c.3.1.5 (A:2-114,A:248-319) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=87.23  E-value=0.45  Score=37.45  Aligned_cols=35  Identities=20%  Similarity=0.228  Sum_probs=28.5

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecC
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVV   77 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~   77 (354)
                      ..+|+|||| |.+|.-+|..|...+.-.+|++++..
T Consensus         3 ~~~VvIIGg-G~~G~e~A~~l~~~g~~v~v~~~~~~   37 (185)
T d1q1ra1           3 NDNVVIVGT-GLAGVEVAFGLRASGWEGNIRLVGDA   37 (185)
T ss_dssp             SCEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSC
T ss_pred             CCCEEEECC-cHHHHHHHHHHHHcCCceEEEEecCc
Confidence            458999999 99999999999988874466666654

>d1gtea3 c.3.1.1 (A:288-440) Dihydropyrimidine dehydrogenase, domain 3 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 3
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=86.86  E-value=0.52  Score=37.06  Aligned_cols=52  Identities=17%  Similarity=0.005  Sum_probs=37.1

Q ss_pred             cchhhhhhhhcccCC---------CCCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecC
Q 018512           24 QENSCLRQAKCRAKG---------GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVV   77 (354)
Q Consensus        24 ~~~~~~~~~~~~~~~---------~~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~   77 (354)
                      ++..|++.+|-+...         +.-..||+|||| |++|.-.|..+...+. ..++++-+.
T Consensus        18 ~a~dfL~~~~~~~~~~~~~~~~~~p~~~~kVvVIGG-GdtA~D~A~~a~r~GA-~~V~vi~rr   78 (153)
T d1gtea3          18 TSKDFLPLVAKSSKAGMCACHSPLPSIRGAVIVLGA-GDTAFDCATSALRCGA-RRVFLVFRK   78 (153)
T ss_dssp             EHHHHHHHHHHHHCBTTBSCCCCCCCCCSEEEEECS-SHHHHHHHHHHHHTTC-SEEEEECSS
T ss_pred             EHHHHHHHHHhccccCCCcccCccccCCCEEEEECC-ChhHHHHHHHHHHcCC-cceeEEEeC
Confidence            777777766554431         334569999999 9999999988877764 367776554

>d2gqfa1 c.3.1.8 (A:1-194,A:343-401) Hypothetical protein HI0933 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Hypothetical protein HI0933
species: Haemophilus influenzae [TaxId: 727]

Probab=86.42  E-value=0.29  Score=41.31  Aligned_cols=33  Identities=21%  Similarity=0.187  Sum_probs=30.1

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   78 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~   78 (354)
                      ..|+|||| |..|...|..|.+.|+  +|+|+|..+
T Consensus         5 ~DViIIGa-G~aGl~aA~~la~~G~--~V~vlEk~~   37 (253)
T d2gqfa1           5 SENIIIGA-GAAGLFCAAQLAKLGK--SVTVFDNGK   37 (253)
T ss_dssp             CSEEEECC-SHHHHHHHHHHHHTTC--CEEEECSSS
T ss_pred             CcEEEECc-CHHHHHHHHHHHHCCC--cEEEEecCC
Confidence            36999999 9999999999999998  899999876

>d1trba1 c.3.1.5 (A:1-118,A:245-316) Thioredoxin reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Thioredoxin reductase
species: Escherichia coli [TaxId: 562]

Probab=86.20  E-value=0.19  Score=40.48  Aligned_cols=33  Identities=27%  Similarity=0.251  Sum_probs=28.8

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   78 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~   78 (354)
                      .+|+|||| |..|...|..+...++  +++++|...
T Consensus         6 ~dVvIIGG-GpaGl~AA~~~ar~g~--~v~iie~~~   38 (190)
T d1trba1           6 SKLLILGS-GPAGYTAAVYAARANL--QPVLITGME   38 (190)
T ss_dssp             EEEEEECC-SHHHHHHHHHHHTTTC--CCEEECCSS
T ss_pred             CcEEEECC-CHHHHHHHHHHHHcCC--ceEEEEeec
Confidence            48999999 9999999999998888  788888643

>d1aoga2 c.3.1.5 (A:170-286) Trypanothione reductase {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Trypanosoma cruzi [TaxId: 5693]

Probab=86.08  E-value=0.51  Score=35.07  Aligned_cols=36  Identities=17%  Similarity=0.069  Sum_probs=28.0

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCC-CCcEEEEEecCC
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINP-LVSVLHLYDVVN   78 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~-~~~ei~L~D~~~   78 (354)
                      +.+|+|+|| |.+|.-+|..+...+ ...+|.|++..+
T Consensus        20 p~~v~ivGg-G~ig~E~A~~l~~l~~~~~~Vtli~~~~   56 (117)
T d1aoga2          20 PRRVLTVGG-GFISVEFAGIFNAYKPKDGQVTLCYRGE   56 (117)
T ss_dssp             CSEEEEECS-SHHHHHHHHHHHHHCCTTCEEEEEESSS
T ss_pred             CCeEEEECC-cHHHHHHHHHhhhcccCCcEEEEEeccc
Confidence            459999999 999999997765433 234899999865

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=85.99  E-value=1.5  Score=34.46  Aligned_cols=38  Identities=24%  Similarity=0.333  Sum_probs=30.4

Q ss_pred             CCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc
Q 018512           40 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT   79 (354)
Q Consensus        40 ~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~   79 (354)
                      .+..+|+|+|+ |-+|...+..+...+.. .|+..|.++.
T Consensus        27 k~GdtVlV~Ga-GG~G~~~~~~~~~~g~~-~Vi~~~~~~~   64 (176)
T d2jhfa2          27 TQGSTCAVFGL-GGVGLSVIMGCKAAGAA-RIIGVDINKD   64 (176)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCS-EEEEECSCGG
T ss_pred             CCCCEEEEECC-CCcHHHHHHHHHHcCCc-eEEeecCcHH
Confidence            34458999999 88999988888877643 8999999873

>d1pn0a1 c.3.1.2 (A:1-240,A:342-461) Phenol hydroxylase {Soil-living yeast (Trichosporon cutaneum) [TaxId: 5554]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Phenol hydroxylase
species: Soil-living yeast (Trichosporon cutaneum) [TaxId: 5554]

Probab=85.89  E-value=0.28  Score=42.73  Aligned_cols=32  Identities=28%  Similarity=0.344  Sum_probs=27.7

Q ss_pred             eEEEEcCCCchHHHHHHHHHh-----CCCCcEEEEEecCC
Q 018512           44 KVAILGAAGGIGQPLAMLMKI-----NPLVSVLHLYDVVN   78 (354)
Q Consensus        44 kI~IiGa~G~vG~~~a~~l~~-----~~~~~ei~L~D~~~   78 (354)
                      -|+|||| |-+|.++|..|++     .|+  +++++|..+
T Consensus         9 DV~IvGa-G~aGl~lA~~La~~~~~~~G~--~v~vlEr~~   45 (360)
T d1pn0a1           9 DVLIVGA-GPAGLMAARVLSEYVRQKPDL--KVRIIDKRS   45 (360)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHHHHSTTC--CEEEECSSS
T ss_pred             CEEEECc-CHHHHHHHHHHHhcccccCCC--cEEEEcCCC
Confidence            5999999 9999999999964     567  899999864

>d2h1qa1 c.67.3.1 (A:1-251) Hypothetical protein Dhaf_3308 {Desulfitobacterium hafniense [TaxId: 49338]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: Dhaf3308-like
family: Dhaf3308-like
domain: Hypothetical protein Dhaf 3308
species: Desulfitobacterium hafniense [TaxId: 49338]

Probab=85.75  E-value=0.85  Score=38.95  Aligned_cols=116  Identities=22%  Similarity=0.220  Sum_probs=69.2

Q ss_pred             CCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcCC
Q 018512           40 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG  119 (354)
Q Consensus        40 ~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~ag  119 (354)
                      .+..||++||-     ..+...+...+.  ++..+|.++..+   |+            . ....++.+..||+||+|+.
T Consensus       120 ~~g~kV~vIG~-----~P~v~~l~~~~~--~~~VlE~~p~~g---d~------------p-~~~~~~lLp~aD~viiTGs  176 (251)
T d2h1qa1         120 VKGKKVGVVGH-----FPHLESLLEPIC--DLSILEWSPEEG---DY------------P-LPASEFILPECDYVYITCA  176 (251)
T ss_dssp             TTTSEEEEESC-----CTTHHHHHTTTS--EEEEEESSCCTT---CE------------E-GGGHHHHGGGCSEEEEETH
T ss_pred             cCCCEEEEEec-----chhHHHHHhcCC--cEEEEeCCCCCC---CC------------C-chHHHHhhhcCCEEEEEec
Confidence            34569999987     345556666665  899999876211   10            1 1234678999999999952


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCCchHHHHHHHHHhCCCCCCCEEEeccchHHHHHHHH
Q 018512          120 VPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFV  199 (354)
Q Consensus       120 ~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~~~~~~~~~~p~~kviG~t~ld~~r~~~~l  199 (354)
                                       .++-.-.+.+-+.++++..+++.-|...+.+.+    .+ .|.  +-+=|+-..|..++.+.+
T Consensus       177 -----------------TlvN~Tl~~LL~~~~~a~~vvl~GPS~p~~P~l----f~-~Gv--~~lag~~v~d~~~~~~~i  232 (251)
T d2h1qa1         177 -----------------SVVDKTLPRLLELSRNARRITLVGPGTPLAPVL----FE-HGL--QELSGFMVKDNARAFRIV  232 (251)
T ss_dssp             -----------------HHHHTCHHHHHHHTTTSSEEEEESTTCCCCGGG----GG-TTC--SEEEEEEESCHHHHHHHH
T ss_pred             -----------------hhhcCCHHHHHHhCCcCCEEEEECCCcccCHHH----Hh-cCC--ceEeEEEEeCHHHHHHHH
Confidence                             233344455556676664344444555554421    23 243  334444567888888877


Q ss_pred             HHH
Q 018512          200 AEV  202 (354)
Q Consensus       200 a~~  202 (354)
                      ++-
T Consensus       233 ~~G  235 (251)
T d2h1qa1         233 AGA  235 (251)
T ss_dssp             TTS
T ss_pred             HcC
Confidence            654

>d1vdca1 c.3.1.5 (A:1-117,A:244-316) Thioredoxin reductase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Thioredoxin reductase
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=85.74  E-value=0.27  Score=39.73  Aligned_cols=33  Identities=18%  Similarity=0.239  Sum_probs=28.7

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   78 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~   78 (354)
                      .+|+|||| |..|...|..+...++  +++++|...
T Consensus         6 ~~VvIIGg-GpaGl~aA~~~ar~g~--~v~vie~~~   38 (192)
T d1vdca1           6 TRLCIVGS-GPAAHTAAIYAARAEL--KPLLFEGWM   38 (192)
T ss_dssp             EEEEEECC-SHHHHHHHHHHHHTTC--CCEEECCSS
T ss_pred             ceEEEECC-CHHHHHHHHHHHHcCC--cEEEEEeec
Confidence            48999999 9999999999998888  788888643

>d1cf2o1 c.2.1.3 (O:1-138,O:304-336) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Methanothermus fervidus [TaxId: 2180]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Methanothermus fervidus [TaxId: 2180]

Probab=85.66  E-value=1.2  Score=35.71  Aligned_cols=78  Identities=19%  Similarity=0.148  Sum_probs=44.0

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHh-cCC---CCCe-EE-----EEeCCCcHHhhhCCC
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADIS-HMD---TGAV-VR-----GFLGQPQLENALTGM  111 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~-~~~---~~~~-v~-----~~~~~~d~~~al~~a  111 (354)
                      +.||+|-|- |.+|..++..+..++...-+.+-|+.+......-+. +..   .... ..     .+....++.+++.++
T Consensus         1 M~~VgINGf-GRIGR~v~R~l~~~~di~vvaInd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~g~~~~~~~~v   79 (171)
T d1cf2o1           1 MKAVAINGY-GTVGKRVADAIAQQDDMKVIGVSKTRPDFEARMALKKGYDLYVAIPERVKLFEKAGIEVAGTVDDMLDEA   79 (171)
T ss_dssp             CEEEEEECC-SHHHHHHHHHHHTSSSEEEEEEEESSCSHHHHHHHHTTCCEEESSGGGHHHHHHTTCCCCEEHHHHHHTC
T ss_pred             CeEEEEEcC-cHHHHHHHHHHHhCCCceEEEEecCCcHHHHHHHHhcCCceEecccccceeecccCcccCCChhHhhcCC
Confidence            458999998 999999999887777543344555544221111111 111   0000 00     001123456778899


Q ss_pred             cEEEEcCCC
Q 018512          112 DLVIIPAGV  120 (354)
Q Consensus       112 DvVIi~ag~  120 (354)
                      |+||.+.|.
T Consensus        80 DvViEcTG~   88 (171)
T d1cf2o1          80 DIVIDCTPE   88 (171)
T ss_dssp             SEEEECCST
T ss_pred             CEEEEccCC
Confidence            999998653

>d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=85.47  E-value=0.54  Score=36.30  Aligned_cols=35  Identities=20%  Similarity=0.343  Sum_probs=26.2

Q ss_pred             eEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC
Q 018512           44 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   78 (354)
Q Consensus        44 kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~   78 (354)
                      ||+|+|++|.+|+.++..+...+...=+..+|...
T Consensus         1 kI~v~Ga~GrMG~~i~~~i~~~~~~~l~~~~d~~~   35 (135)
T d1yl7a1           1 RVGVLGAKGKVGATMVRAVAAADDLTLSAELDAGD   35 (135)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTSEEEEEECTTC
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCC
Confidence            89999999999999999887765432344566543

>d1gesa1 c.3.1.5 (A:3-146,A:263-335) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=85.36  E-value=0.37  Score=39.31  Aligned_cols=32  Identities=13%  Similarity=0.065  Sum_probs=28.9

Q ss_pred             eEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC
Q 018512           44 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   78 (354)
Q Consensus        44 kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~   78 (354)
                      -|+|||| |..|...|..+...|+  +++++|.+.
T Consensus         4 DvvVIG~-G~aG~~aA~~a~~~G~--kV~iiE~~~   35 (217)
T d1gesa1           4 DYIAIGG-GSGGIASINRAAMYGQ--KCALIEAKE   35 (217)
T ss_dssp             EEEEECC-SHHHHHHHHHHHTTTC--CEEEEESSC
T ss_pred             CEEEECC-CHHHHHHHHHHHHCCC--EEEEEeccC
Confidence            4899999 9999999999998888  899999865

>d2nvwa1 c.2.1.3 (A:2-154,A:374-457) Galactose/lactose metabolism regulatory protein GAL80 {Yeast (Kluyveromyces lactis) [TaxId: 28985]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Galactose/lactose metabolism regulatory protein GAL80
species: Yeast (Kluyveromyces lactis) [TaxId: 28985]

Probab=85.31  E-value=1.1  Score=37.58  Aligned_cols=73  Identities=14%  Similarity=0.285  Sum_probs=39.3

Q ss_pred             CCCCCeEEEEcCCCc----hHHHHHHHHHhCCCCcEEE-EEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhh--CCC
Q 018512           39 GAAGFKVAILGAAGG----IGQPLAMLMKINPLVSVLH-LYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENAL--TGM  111 (354)
Q Consensus        39 ~~~~~kI~IiGa~G~----vG~~~a~~l~~~~~~~ei~-L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al--~~a  111 (354)
                      .++++||+|||+ |.    ++..-+..+.......+|+ ++|++....... ..... .+....+   .++++.+  .+.
T Consensus        13 ~~k~irvgiIG~-G~~~~~~~~~h~~ai~~~~~~~~ivav~d~~~~~~~~~-~~~~~-~~~~~~~---~~~~~l~~~~~i   86 (237)
T d2nvwa1          13 SSRPIRVGFVGL-TSGKSWVAKTHFLAIQQLSSQFQIVALYNPTLKSSLQT-IEQLQ-LKHATGF---DSLESFAQYKDI   86 (237)
T ss_dssp             GGCCEEEEEECC-CSTTSHHHHTHHHHHHHTTTTEEEEEEECSCHHHHHHH-HHHTT-CTTCEEE---SCHHHHHHCTTC
T ss_pred             CCCCeEEEEEec-CccccHHHHHHHHHHHhcCCCeEEEEEEcCCHHHHHHH-HHhcc-cccceee---cchhhccccccc
Confidence            356789999998 66    4444455555543222655 788875221111 11111 1222333   3566666  467


Q ss_pred             cEEEEc
Q 018512          112 DLVIIP  117 (354)
Q Consensus       112 DvVIi~  117 (354)
                      |+|+++
T Consensus        87 D~V~i~   92 (237)
T d2nvwa1          87 DMIVVS   92 (237)
T ss_dssp             SEEEEC
T ss_pred             ceeecc
Confidence            788887

>d1rp0a1 c.3.1.6 (A:7-284) Thiazole biosynthetic enzyme Thi4 {Thale cress(Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Thi4-like
domain: Thiazole biosynthetic enzyme Thi4
species: Thale cress(Arabidopsis thaliana) [TaxId: 3702]

Probab=84.87  E-value=0.37  Score=41.29  Aligned_cols=32  Identities=22%  Similarity=0.340  Sum_probs=28.5

Q ss_pred             eEEEEcCCCchHHHHHHHHHhC-CCCcEEEEEecCC
Q 018512           44 KVAILGAAGGIGQPLAMLMKIN-PLVSVLHLYDVVN   78 (354)
Q Consensus        44 kI~IiGa~G~vG~~~a~~l~~~-~~~~ei~L~D~~~   78 (354)
                      -|+|||| |..|...|..|+.+ |+  +++++|..+
T Consensus        35 DViVIGa-GpaGL~aA~~LA~~~G~--~V~vlE~~~   67 (278)
T d1rp0a1          35 DVVVVGA-GSAGLSAAYEISKNPNV--QVAIIEQSV   67 (278)
T ss_dssp             EEEEECC-SHHHHHHHHHHHTSTTS--CEEEEESSS
T ss_pred             CEEEECC-CHHHHHHHHHHHHccCC--eEEEEecCC
Confidence            4999999 99999999999874 77  999999865

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=84.85  E-value=1.9  Score=33.52  Aligned_cols=74  Identities=18%  Similarity=0.183  Sum_probs=45.3

Q ss_pred             CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc-hhHHHHHhcCCCCCeEEEEeCCCcHHhhh------CCCcE
Q 018512           41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT-PGVTADISHMDTGAVVRGFLGQPQLENAL------TGMDL  113 (354)
Q Consensus        41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~-~g~~~dl~~~~~~~~v~~~~~~~d~~~al------~~aDv  113 (354)
                      +.-+|.|+|++|.+|...+..+...+.. +|+..|.++. ...+.++.   ....+.  ....|+.+.+      .+.|+
T Consensus        27 ~g~~vlV~G~~G~vG~~~~~~~~~~g~~-~V~~~~~~~~~~~~~~~~G---a~~~i~--~~~~~~~~~~~~~~~~~~~d~  100 (170)
T d1jvba2          27 PTKTLLVVGAGGGLGTMAVQIAKAVSGA-TIIGVDVREEAVEAAKRAG---ADYVIN--ASMQDPLAEIRRITESKGVDA  100 (170)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHTCC-EEEEEESSHHHHHHHHHHT---CSEEEE--TTTSCHHHHHHHHTTTSCEEE
T ss_pred             CCCEEEEEeccccceeeeeecccccccc-cccccccchhhHHHHHHcC---Cceeec--cCCcCHHHHHHHHhhcccchh
Confidence            3458999997799999988887766643 8999998762 22333332   111111  1122332222      46999


Q ss_pred             EEEcCCC
Q 018512          114 VIIPAGV  120 (354)
Q Consensus       114 VIi~ag~  120 (354)
                      ||.+.|.
T Consensus       101 vid~~g~  107 (170)
T d1jvba2         101 VIDLNNS  107 (170)
T ss_dssp             EEESCCC
T ss_pred             hhccccc
Confidence            9998653

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=84.66  E-value=0.68  Score=36.25  Aligned_cols=98  Identities=19%  Similarity=0.235  Sum_probs=57.7

Q ss_pred             CCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCc-hhHHHHHhcCCCCCeEEEEeCCCcHHh----hhCCCcEE
Q 018512           40 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT-PGVTADISHMDTGAVVRGFLGQPQLEN----ALTGMDLV  114 (354)
Q Consensus        40 ~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~-~g~~~dl~~~~~~~~v~~~~~~~d~~~----al~~aDvV  114 (354)
                      .+..+|+|+|+ |.+|...+..+...|.  +|+.+|.++. ...+.++.   ....+. . ...+..+    ...+.|.+
T Consensus        26 ~~g~~VlV~Ga-G~vG~~~~~~ak~~G~--~Vi~~~~~~~~~~~a~~~G---a~~~i~-~-~~~~~~~~~~~~~~g~~~~   97 (166)
T d1llua2          26 RPGQWVAISGI-GGLGHVAVQYARAMGL--HVAAIDIDDAKLELARKLG---ASLTVN-A-RQEDPVEAIQRDIGGAHGV   97 (166)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHTT---CSEEEE-T-TTSCHHHHHHHHHSSEEEE
T ss_pred             CCCCEEEEeec-cccHHHHHHHHHHcCC--ccceecchhhHHHhhhccC---cccccc-c-cchhHHHHHHHhhcCCccc
Confidence            34568999998 9999999988888885  8999998762 22333322   111121 1 1223323    33566777


Q ss_pred             EEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCC
Q 018512          115 IIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVN  163 (354)
Q Consensus       115 Ii~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tNPv~  163 (354)
                      |+..+.+               +.+.+   .++-..|.+.+++++.|-+
T Consensus        98 i~~~~~~---------------~~~~~---~~~~l~~~G~iv~~G~~~~  128 (166)
T d1llua2          98 LVTAVSN---------------SAFGQ---AIGMARRGGTIALVGLPPG  128 (166)
T ss_dssp             EECCSCH---------------HHHHH---HHTTEEEEEEEEECCCCSS
T ss_pred             ccccccc---------------hHHHH---HHHHhcCCcEEEEEEecCC
Confidence            7764322               11222   3333457898888876644

>d1v59a1 c.3.1.5 (A:1-160,A:283-355) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=84.28  E-value=0.44  Score=38.98  Aligned_cols=32  Identities=19%  Similarity=0.145  Sum_probs=29.0

Q ss_pred             eEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC
Q 018512           44 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   78 (354)
Q Consensus        44 kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~   78 (354)
                      =|+|||| |..|.+.|..+.+.|.  +++|+|..+
T Consensus         7 DviVIG~-GpAGl~aA~~aa~~G~--kV~lie~~~   38 (233)
T d1v59a1           7 DVVIIGG-GPAGYVAAIKAAQLGF--NTACVEKRG   38 (233)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTC--CEEEEESSS
T ss_pred             CEEEECC-CHHHHHHHHHHHHCCC--cEEEEEecC
Confidence            4899999 9999999999999888  899999764

>d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Zymomonas mobilis [TaxId: 542]

Probab=84.01  E-value=0.44  Score=37.60  Aligned_cols=37  Identities=24%  Similarity=0.215  Sum_probs=27.4

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   78 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~   78 (354)
                      |++|+|+|++|++|.+...-+...+-.-+|..+-.+.
T Consensus         2 pK~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~lsa~~   38 (150)
T d1r0ka2           2 PRTVTVLGATGSIGHSTLDLIERNLDRYQVIALTANR   38 (150)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTGGGEEEEEEEESS
T ss_pred             CcEEEEECCCcHHHHHHHHHHHcCCCCcEEEEEEeCC
Confidence            5699999999999999877776654322666665544

>d1nvmb1 c.2.1.3 (B:1-131,B:287-312) Acetaldehyde dehydrogenase (acylating) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Acetaldehyde dehydrogenase (acylating)
species: Pseudomonas sp. [TaxId: 306]

Probab=83.99  E-value=0.45  Score=37.71  Aligned_cols=36  Identities=25%  Similarity=0.423  Sum_probs=24.5

Q ss_pred             CCCeEEEEcCCCchHHHHH-HHHHhCCCCcEEEE-EecCC
Q 018512           41 AGFKVAILGAAGGIGQPLA-MLMKINPLVSVLHL-YDVVN   78 (354)
Q Consensus        41 ~~~kI~IiGa~G~vG~~~a-~~l~~~~~~~ei~L-~D~~~   78 (354)
                      +++||+|||+ |.+|.... ..+...+.. |+++ .|++.
T Consensus         3 kkirvaIIGa-G~ig~~~~~~~l~~~~~~-el~avas~~~   40 (157)
T d1nvmb1           3 QKLKVAIIGS-GNIGTDLMIKVLRNAKYL-EMGAMVGIDA   40 (157)
T ss_dssp             SCEEEEEECC-SHHHHHHHHHHHHHCSSE-EEEEEECSCT
T ss_pred             CCcEEEEEcC-cHHHHHHHHHHHhhCCcc-eEEEEEecch
Confidence            4579999997 99998754 455444444 6655 47765

>d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Phenylalanine dehydrogenase
species: Rhodococcus sp., M4 [TaxId: 1831]

Probab=83.72  E-value=0.68  Score=38.21  Aligned_cols=36  Identities=28%  Similarity=0.345  Sum_probs=32.0

Q ss_pred             CCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC
Q 018512           40 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   78 (354)
Q Consensus        40 ~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~   78 (354)
                      -+..+|+|-|. |+||+.++..|...|.  .|+..|++.
T Consensus        25 L~gk~v~IqG~-G~VG~~~A~~L~~~Ga--kvvv~d~d~   60 (201)
T d1c1da1          25 LDGLTVLVQGL-GAVGGSLASLAAEAGA--QLLVADTDT   60 (201)
T ss_dssp             STTCEEEEECC-SHHHHHHHHHHHHTTC--EEEEECSCH
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHCCC--EEEEecchH
Confidence            35569999998 9999999999999886  899999975

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=83.67  E-value=2  Score=33.51  Aligned_cols=87  Identities=18%  Similarity=0.157  Sum_probs=49.1

Q ss_pred             hhhhhhcccCCCCCCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC-chhHHHHHhcCCCCCeEEEEeCCCcHHh
Q 018512           28 CLRQAKCRAKGGAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN-TPGVTADISHMDTGAVVRGFLGQPQLEN  106 (354)
Q Consensus        28 ~~~~~~~~~~~~~~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~-~~g~~~dl~~~~~~~~v~~~~~~~d~~~  106 (354)
                      .|..+..+. .-.+.-+|+|.|+ |-+|...++.+...+. ..|+..|.++ ....+.++.-.   ..+.......+..+
T Consensus        16 ay~al~~~~-~~~~G~tVlI~Ga-GGvG~~aiq~ak~~G~-~~vi~~~~~~~k~~~ak~lGa~---~~i~~~~~~~~~~~   89 (176)
T d2fzwa2          16 GYGAAVNTA-KLEPGSVCAVFGL-GGVGLAVIMGCKVAGA-SRIIGVDINKDKFARAKEFGAT---ECINPQDFSKPIQE   89 (176)
T ss_dssp             HHHHHHTTT-CCCTTCEEEEECC-SHHHHHHHHHHHHHTC-SEEEEECSCGGGHHHHHHHTCS---EEECGGGCSSCHHH
T ss_pred             HHHHHHHhh-CCCCCCEEEEecc-hhHHHHHHHHHHHHhc-CceEEEcccHHHHHHHHHhCCc---EEEeCCchhhHHHH
Confidence            455543222 2234458999998 8899998888877664 2788888876 33344444321   11111000112222


Q ss_pred             hh-----CCCcEEEEcCCC
Q 018512          107 AL-----TGMDLVIIPAGV  120 (354)
Q Consensus       107 al-----~~aDvVIi~ag~  120 (354)
                      .+     .++|+||.+.|.
T Consensus        90 ~~~~~~~~g~D~vid~~G~  108 (176)
T d2fzwa2          90 VLIEMTDGGVDYSFECIGN  108 (176)
T ss_dssp             HHHHHTTSCBSEEEECSCC
T ss_pred             HHHHHcCCCCcEeeecCCC
Confidence            22     689999998763

>d1y0pa2 c.3.1.4 (A:111-361,A:512-568) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Flavocytochrome c3 (respiratory fumarate reductase)
species: Shewanella frigidimarina [TaxId: 56812]

Probab=82.92  E-value=0.5  Score=40.75  Aligned_cols=33  Identities=21%  Similarity=0.286  Sum_probs=30.0

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   78 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~   78 (354)
                      .-|+|||+ |..|.+.|..|++.|.  +|+|+|...
T Consensus        17 ~DVlVIG~-G~aGl~aA~~la~~G~--~V~lvEK~~   49 (308)
T d1y0pa2          17 VDVVVVGS-GGAGFSAAISATDSGA--KVILIEKEP   49 (308)
T ss_dssp             CSEEEECC-SHHHHHHHHHHHHTTC--CEEEECSSS
T ss_pred             CCEEEECc-CHHHHHHHHHHHHCCC--cEEEEecCC
Confidence            46999999 9999999999999997  899999865

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=82.82  E-value=1.8  Score=34.26  Aligned_cols=95  Identities=13%  Similarity=0.120  Sum_probs=56.1

Q ss_pred             CCCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHh------hhCCCcEE
Q 018512           41 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLEN------ALTGMDLV  114 (354)
Q Consensus        41 ~~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~------al~~aDvV  114 (354)
                      +...|.|.||+|.||+..+......|.  +++..+.++.+  ...+..... ..+-.. .+.++.+      .-++.|+|
T Consensus        29 ~G~~VlV~ga~ggvG~~aiqlak~~Ga--~vi~~~~~~~~--~~~~~~~Ga-~~vi~~-~~~~~~~~~~~~~~~~Gvd~v  102 (182)
T d1v3va2          29 GGETVLVSAAAGAVGSVVGQIAKLKGC--KVVGAAGSDEK--IAYLKQIGF-DAAFNY-KTVNSLEEALKKASPDGYDCY  102 (182)
T ss_dssp             SSCEEEESSTTSHHHHHHHHHHHHTTC--EEEEEESSHHH--HHHHHHTTC-SEEEET-TSCSCHHHHHHHHCTTCEEEE
T ss_pred             CCCEEEEEeCCCchhHHHHHHHHccCC--EEEEeCCCHHH--HHHHHhhhh-hhhccc-ccccHHHHHHHHhhcCCCcee
Confidence            445899999999999999999988887  78877765421  122222222 112111 1222222      22779999


Q ss_pred             EEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecC
Q 018512          115 IIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISN  160 (354)
Q Consensus       115 Ii~ag~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv~tN  160 (354)
                      +-+.|.                +.+.+   .+.-..|.+.++++.+
T Consensus       103 ~D~vG~----------------~~~~~---~~~~l~~~G~~v~~G~  129 (182)
T d1v3va2         103 FDNVGG----------------EFLNT---VLSQMKDFGKIAICGA  129 (182)
T ss_dssp             EESSCH----------------HHHHH---HGGGEEEEEEEEECCC
T ss_pred             EEecCc----------------hhhhh---hhhhccCCCeEEeecc
Confidence            998641                12222   2333457888888764

>d1fl2a1 c.3.1.5 (A:212-325,A:452-521) Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains
species: Escherichia coli [TaxId: 562]

Probab=82.77  E-value=0.53  Score=37.07  Aligned_cols=31  Identities=23%  Similarity=0.259  Sum_probs=27.3

Q ss_pred             eEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecC
Q 018512           44 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVV   77 (354)
Q Consensus        44 kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~   77 (354)
                      -|+|||| |..|...|..+.+.|+  +++++|.+
T Consensus         3 DViIIGg-GpaGl~AAi~aar~G~--~v~iie~~   33 (184)
T d1fl2a1           3 DVLIVGS-GPAGAAAAIYSARKGI--RTGLMGER   33 (184)
T ss_dssp             EEEEECC-SHHHHHHHHHHHTTTC--CEEEECSS
T ss_pred             cEEEECc-CHHHHHHHHHHHHcCC--eEEEEEEe
Confidence            5899999 9999999999998888  78888853

>d1dxla1 c.3.1.5 (A:4-152,A:276-347) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=82.15  E-value=0.48  Score=38.55  Aligned_cols=33  Identities=18%  Similarity=0.086  Sum_probs=29.1

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   78 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~   78 (354)
                      .=|+|||| |..|.+.|..+...|.  +++++|..+
T Consensus         4 yDvvVIGg-GpaGl~aA~~aa~~G~--kV~vie~~~   36 (221)
T d1dxla1           4 NDVVIIGG-GPGGYVAAIKAAQLGF--KTTCIEKRG   36 (221)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHHTC--CEEEEECSS
T ss_pred             CCEEEECC-CHHHHHHHHHHHHCCC--cEEEEEecC
Confidence            45899999 9999999999998887  899999764

>d1m6ia1 c.3.1.5 (A:128-263,A:401-477) Apoptosis-inducing factor (AIF) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Apoptosis-inducing factor (AIF)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=81.76  E-value=0.67  Score=38.11  Aligned_cols=35  Identities=9%  Similarity=0.053  Sum_probs=29.8

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC
Q 018512           43 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   78 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~   78 (354)
                      ..++|||| |+.|..+|..|...+...+|++++...
T Consensus         5 ~~~vIvG~-G~aG~~~A~~Lr~~~~~~~I~li~~e~   39 (213)
T d1m6ia1           5 VPFLLIGG-GTAAFAAARSIRARDPGARVLIVSEDP   39 (213)
T ss_dssp             EEEEEESC-SHHHHHHHHHHHHHSTTCEEEEEESSS
T ss_pred             CCEEEECC-cHHHHHHHHHHHhcCCCCcEEEEeCCC
Confidence            36899999 999999999998877767899998643

>d1d7ya1 c.3.1.5 (A:5-115,A:237-308) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=81.64  E-value=0.6  Score=36.99  Aligned_cols=32  Identities=16%  Similarity=0.222  Sum_probs=25.9

Q ss_pred             eEEEEcCCCchHHHHHHHHHhCCCCcEEEEEec
Q 018512           44 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDV   76 (354)
Q Consensus        44 kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~   76 (354)
                      ||+|||| |.+|..+|..|...+.-.+|+++..
T Consensus         5 ~VvIIGg-G~~G~e~A~~l~~~g~~v~i~~~~~   36 (183)
T d1d7ya1           5 PVVVLGA-GLASVSFVAELRQAGYQGLITVVGD   36 (183)
T ss_dssp             SEEEECC-SHHHHHHHHHHHHHTCCSCEEEEES
T ss_pred             CEEEECc-cHHHHHHHHHHHhcCCceEEEEEec
Confidence            6999999 9999999999988776446666544

>d1m6ia2 c.3.1.5 (A:264-400) Apoptosis-inducing factor (AIF) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Apoptosis-inducing factor (AIF)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=81.59  E-value=0.77  Score=35.02  Aligned_cols=35  Identities=20%  Similarity=0.197  Sum_probs=26.9

Q ss_pred             CeEEEEcCCCchHHHHHHHHHhC--CCCcEEEEEecCC
Q 018512           43 FKVAILGAAGGIGQPLAMLMKIN--PLVSVLHLYDVVN   78 (354)
Q Consensus        43 ~kI~IiGa~G~vG~~~a~~l~~~--~~~~ei~L~D~~~   78 (354)
                      .+|+|||| |++|.-+|..|...  ....+|.+++..+
T Consensus        38 k~i~IvGg-G~~G~E~A~~l~~~~~~~g~~Vt~i~~~~   74 (137)
T d1m6ia2          38 KSITIIGG-GFLGSELACALGRKARALGTEVIQLFPEK   74 (137)
T ss_dssp             SEEEEECC-SHHHHHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CEEEEECC-CHHHHHHHHHHHHHHHhcCCEEEEecccc
Confidence            38999999 99999988877532  2233999998865

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=81.00  E-value=2.3  Score=33.24  Aligned_cols=35  Identities=34%  Similarity=0.516  Sum_probs=27.8

Q ss_pred             CCeEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC
Q 018512           42 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   78 (354)
Q Consensus        42 ~~kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~   78 (354)
                      .-.|.|+|+ |.+|...+..+...+.. .++..|.++
T Consensus        33 g~~vli~Ga-G~vG~~~~~~a~~~g~~-~vv~~~~~~   67 (172)
T d1h2ba2          33 GAYVAIVGV-GGLGHIAVQLLKVMTPA-TVIALDVKE   67 (172)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHHCCC-EEEEEESSH
T ss_pred             CCEEEEeCC-ChHHHHHHHHHHhhcCc-ccccccchh
Confidence            358999998 99999988887766642 788889876

>d2gmha1 c.3.1.2 (A:4-236,A:336-482) Electron transfer flavoprotein-ubiquinone oxidoreductase, EFT-QO {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Electron transfer flavoprotein-ubiquinone oxidoreductase, EFT-QO
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=80.65  E-value=0.65  Score=41.97  Aligned_cols=32  Identities=31%  Similarity=0.389  Sum_probs=28.5

Q ss_pred             eEEEEcCCCchHHHHHHHHHh------CCCCcEEEEEecCC
Q 018512           44 KVAILGAAGGIGQPLAMLMKI------NPLVSVLHLYDVVN   78 (354)
Q Consensus        44 kI~IiGa~G~vG~~~a~~l~~------~~~~~ei~L~D~~~   78 (354)
                      =|+|||| |-.|++.|..|++      .|+  +|+|+|...
T Consensus        34 DViIVGg-GPAGlsaA~~LA~l~~~~~~Gl--~VlllEK~~   71 (380)
T d2gmha1          34 DVVIVGA-GPAGLSAATRLKQLAAQHEKDL--RVCLVEKAA   71 (380)
T ss_dssp             SEEEECC-SHHHHHHHHHHHHHHHHTTCCC--CEEEECSSS
T ss_pred             CEEEECC-CHHHHHHHHHHHhhhhhhcCCC--EEEEEcCCC
Confidence            5999999 9999999999986      677  999999864

>d2csua1 c.2.1.8 (A:1-129) Acetate-CoA ligase alpha chain, AcdA, N-terminal domain {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Acetate-CoA ligase alpha chain, AcdA, N-terminal domain
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=80.61  E-value=4.8  Score=30.19  Aligned_cols=85  Identities=14%  Similarity=0.168  Sum_probs=49.8

Q ss_pred             CCeEEEEcCC---CchHHHHHHHHHhCCCCcEEEEEecCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCcEEEEcC
Q 018512           42 GFKVAILGAA---GGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA  118 (354)
Q Consensus        42 ~~kI~IiGa~---G~vG~~~a~~l~~~~~~~ei~L~D~~~~~g~~~dl~~~~~~~~v~~~~~~~d~~~al~~aDvVIi~a  118 (354)
                      +..|+||||+   +..|..+...|...+ ..+|+.+......     +.-      +..+   .++.+.=...|+++++.
T Consensus         8 PksIAVVGaS~~~~~~g~~v~~~L~~~~-~g~v~pVnP~~~~-----i~G------~~~y---~sl~dlp~~vDlvvi~v   72 (129)
T d2csua1           8 PKGIAVIGASNDPKKLGYEVFKNLKEYK-KGKVYPVNIKEEE-----VQG------VKAY---KSVKDIPDEIDLAIIVV   72 (129)
T ss_dssp             CSEEEEETCCSCTTSHHHHHHHHHTTCC-SSEEEEECSSCSE-----ETT------EECB---SSTTSCSSCCSEEEECS
T ss_pred             CCeEEEEccCCCCCCcHHHHHHHHHHcC-CCcEEEeccCccc-----cCC------eEee---cchhhcCCCCceEEEec
Confidence            4589999997   788888888876554 3488888764310     110      1111   22322224678888873


Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEE
Q 018512          119 GVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNL  157 (354)
Q Consensus       119 g~~~~~g~~r~d~~~~n~~~~~~i~~~i~~~~p~a~viv  157 (354)
                      .                .+.+.++.+++.+.+-++.++.
T Consensus        73 p----------------~~~~~~~~~~~~~~g~~~~vi~   95 (129)
T d2csua1          73 P----------------KRFVKDTLIQCGEKGVKGVVII   95 (129)
T ss_dssp             C----------------HHHHHHHHHHHHHHTCCEEEEC
T ss_pred             C----------------hHHhHHHHHHHHHcCCCEEEEe
Confidence            1                2344455666666666654443

>d1ojta1 c.3.1.5 (A:117-275,A:401-470) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=80.09  E-value=0.79  Score=37.70  Aligned_cols=32  Identities=22%  Similarity=0.266  Sum_probs=29.1

Q ss_pred             eEEEEcCCCchHHHHHHHHHhCCCCcEEEEEecCC
Q 018512           44 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   78 (354)
Q Consensus        44 kI~IiGa~G~vG~~~a~~l~~~~~~~ei~L~D~~~   78 (354)
                      =|+|||| |..|.+.|..+.+.++  +++++|..+
T Consensus         8 DviIIG~-GPaGlsaA~~aa~~G~--~V~viE~~~   39 (229)
T d1ojta1           8 DVVVLGG-GPGGYSAAFAAADEGL--KVAIVERYK   39 (229)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTC--CEEEEESSS
T ss_pred             CEEEECc-CHHHHHHHHHHHHCCC--eEEEEeccC
Confidence            4899999 9999999999999998  899999765