Citrus Sinensis ID: 018567


Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350----
MSKTKPPHHQQFLLLLLFLLIVTATNAATKYKFKEAPQFYNSQNCPNIIINQQGDEDHLINTCSAEAIHVAMTLDAPYLRGSMAAIHSVLQHSSCPQNVLFHFVSSDKDANNLLHETISHSFPSLSFQIYPFDDTAVSGLISTSIRSALDCPLNYARNYLANLLPPCVHKVVYLDSDLVLVDDISKLAATPLEDHAVLAAPEYCNANFTSYFTPTFWSNPTLSLTFSGRNACYFNTGVMVIDLERWRKGDYTRKIVEWMELQKRMRIYELGSLPPFLLVFAGNIAPVDHRWNQHGLGGDNYRGLCRDLHPGPVSLLHWSGKGKPWVRLDANRPCPLDALWAPYDLLQTPFLLES
cccccccccHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccEEEEEECccccHHHHHHHHHHHHHHccccccEEEEEEcccccHHHHHHHHHHcccccccEEEEEccccHHccccccccccccccHHHHHHHHccccccccccEEEEEcccEEEEcccHHHHcccccccEEEEECccccccccccccccccccHHHHcccccccccccccccHHccHHHHHHcccHHHHHHHHHHHcccccccccccHHHHHHHcccCECcccccccccccccccccccccccccccEEEEEccccccccccccccccccHHHccccccccccccccc
**********QFLLLLLFLLIVTATNAATKYKFKEAPQFYNSQNCPNII********HLINTCSAEAIHVAMTLDAPYLRGSMAAIHSVLQHSSCPQNVLFHFVSSDKDANNLLHETISHSFPSLSFQIYPFDDTAVSGLISTSIRSALDCPLNYARNYLANLLPPCVHKVVYLDSDLVLVDDISKLAATPLEDHAVLAAPEYCNANFTSYFTPTFWSNPTLSLTFSGRNACYFNTGVMVIDLERWRKGDYTRKIVEWMELQKRMRIYELGSLPPFLLVFAGNIAPVDHRWNQHGLGGDNYRGLCRDLHPGPVSLLHWSGKGKPWVRLDANRPCPLDALWAPYDLLQTPFLLE*
xxxxxxxxxxxHHHHHHHHHHHHHHHHxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
SSSSSSSSSSSSSSSSSSSSSSSSSSSxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MSKTKPPHHQQFLLLLLFLLIVTATNAATKYKFKEAPQFYNSQNCPNIIINQQGDEDHLINTCSAEAIHVAMTLDAPYLRGSMAAIHSVLQHSSCPQNVLFHFVSSDKDANNLLHETISHSFPSLSFQIYPFDDTAVSGLISTSIRSALDCPLNYARNYLANLLPPCVHKVVYLDSDLVLVDDISKLAATPLEDHAVLAAPEYCNANFTSYFTPTFWSNPTLSLTFSGRNACYFNTGVMVIDLERWRKGDYTRKIVEWMELQKRMRIYELGSLPPFLLVFAGNIAPVDHRWNQHGLGGDNYRGLCRDLHPGPVSLLHWSGKGKPWVRLDANRPCPLDALWAPYDLLQTPFLLES

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Probable galacturonosyltransferase-like 2 May be involved in pectin and/or xylans biosynthesis in cell walls.confidentQ9S7G2
Probable galacturonosyltransferase-like 1 Required for the biosynthesis of the tetrasaccharide primer sequence, beta-D-Xyl-(1,3)-alpha-l-Rha-(1,2)-alpha-D-GalA-(1,4)-D-Xyl, located at the reducing end of glucuronoxylan. Might catalyze the transfer of the reducing Xyl residue onto a protein acceptor in the endoplasmic reticulum, which is then transported to the Golgi where the subsequent additions of sugar residues take place.probableQ9LN68

Prediction of Enzyme Commission Number ?

No confident prediction of EC number!


Spatial Structural Prediction

Structural Models Based on Templates

Template: 1G9R, chain A
Confidence level:very confident
Coverage over the Query: 69-330
View the alignment between query and template
View the model in PyMOL
Template: 3TZT, chain A
Confidence level:very confident
Coverage over the Query: 67-133,151-203,233-262,273-349
View the alignment between query and template
View the model in PyMOL
Template: 1XHB, chain A
Confidence level:probable
Coverage over the Query: 33-51,63-139,153-189
View the alignment between query and template
View the model in PyMOL