Citrus Sinensis ID: 018567

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350----
MSKTKPPHHQQFLLLLLFLLIVTATNAATKYKFKEAPQFYNSQNCPNIIINQQGDEDHLINTCSAEAIHVAMTLDAPYLRGSMAAIHSVLQHSSCPQNVLFHFVSSDKDANNLLHETISHSFPSLSFQIYPFDDTAVSGLISTSIRSALDCPLNYARNYLANLLPPCVHKVVYLDSDLVLVDDISKLAATPLEDHAVLAAPEYCNANFTSYFTPTFWSNPTLSLTFSGRNACYFNTGVMVIDLERWRKGDYTRKIVEWMELQKRMRIYELGSLPPFLLVFAGNIAPVDHRWNQHGLGGDNYRGLCRDLHPGPVSLLHWSGKGKPWVRLDANRPCPLDALWAPYDLLQTPFLLES
ccccccccHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccEEEEEEEccccHHHHHHHHHHHHHHccccccEEEEEEcccccHHHHHHHHHHcccccccEEEEEcccHHHccccccccccccccHHHHHHHHccccccccccEEEEEcccEEEEcccHHHHcccccccEEEEEEccccccccccccccccccHHHHcccccccccccccccHHccHHHHHHHccHHHHHHHHHHHccccccccccHHHHHHHHcccEEEcccccccccccccccccccccccccccEEEEEcccccccccccccccccHHHHccccccccccccccc
cccccccccHHHHHHHHHHHHHccccccccccHHccHHHccccccccccccHHccccccccccccccEEEEEEccHHHHHHHHHHHHHHHHHccccccEEEEEEEccccHHHHHHHHHHccccccEEEEEEcccccHcccccccccHHHHHHHHHHHHHHHHHccccccEEEEEcccEEEEccHHHHHcccccccEEEccccHHcccccccccccccccHHHHHHcccccccHEcccEEEEEHHHHHHccHHHHHHHHHHHHHccEEEEccccccEEEEEccccccccccHcEcccccccccccccccccccEEEEEEccccccEEEcccccccccHHHccccccccccHHccc
msktkpphhQQFLLLLLFLLIVTATNaatkykfkeapqfynsqncpniiinqqgdedhliNTCSAEAIHVAMTldapylrgSMAAIHSVLqhsscpqnvlFHFVSSDKDANNLLHEtishsfpslsfqiypfddtavsGLISTSIRSALDCPLNYARNYlanllppcvhkvvyldsdlvlVDDISklaatpledhavlaapeycnanftsyftptfwsnptlsltfsgrnacyfntgvmvidlerwrkgdyTRKIVEWMELQKRMRIYelgslppfllvfagniapvdhrwnqhglggdnyrglcrdlhpgpvsllhwsgkgkpwvrldanrpcpldalwapydllqtpflles
msktkpphhQQFLLLLLFLLIVTATNAATKYKFKEAPQFYNSQNCPNIIINQQGDEDHLINTCSAEAIHVAMTLDAPYLRGSMAAIHSVLQHSSCPQNVLFHFVSSDKDANNLLHETISHSFPSLSFQIYPFDDTAVSGLISTSIRSALDCPLNYARNYLANLLPPCVHKVVYLDSDLVLVDDISKLAATPLEDHAVLAAPEYCNANFTSYFTPTFWSNPTLSLTFSGRNACYFNTGVmvidlerwrkgdytrKIVEWMELQKRMRIYELGSLPPFLLVFAGNIAPVDHRWNQHGLGGDNYRGLCRDLHPGPVSLLHWSGKGKPWVRLDANRPCPLDALWAPYDLLQTPFLLES
MSKTKPPHHQQflllllfllIVTATNAATKYKFKEAPQFYNSQNCPNIIINQQGDEDHLINTCSAEAIHVAMTLDAPYLRGSMAAIHSVLQHSSCPQNVLFHFVSSDKDANNLLHETISHSFPSLSFQIYPFDDTAVSGLISTSIRSALDCPlnyarnylanllPPCVHkvvyldsdlvlvddisklAATPLEDHAVLAAPEYCNANFTSYFTPTFWSNPTLSLTFSGRNACYFNTGVMVIDLERWRKGDYTRKIVEWMELQKRMRIYELGSLPPFLLVFAGNIAPVDHRWNQHGLGGDNYRGLCRDLHPGPVSLLHWSGKGKPWVRLDANRPCPLDALWAPYDLLQTPFLLES
**********QFLLLLLFLLIVTATNAATKYKFKEAPQFYNSQNCPNIIINQQGDEDHLINTCSAEAIHVAMTLDAPYLRGSMAAIHSVLQHSSCPQNVLFHFVSSDKDANNLLHETISHSFPSLSFQIYPFDDTAVSGLISTSIRSALDCPLNYARNYLANLLPPCVHKVVYLDSDLVLVDDISKLAATPLEDHAVLAAPEYCNANFTSYFTPTFWSNPTLSLTFSGRNACYFNTGVMVIDLERWRKGDYTRKIVEWMELQKRMRIYELGSLPPFLLVFAGNIAPVDHRWNQHGLGGDNYRGLCRDLHPGPVSLLHWSGKGKPWVRLDANRPCPLDALWAPYDLLQTPFL***
**********QFLLLLLFLLIVTATNAATKYKFKEAPQFYNSQNCPNI****************AEAIHVAMTLDAPYLRGSMAAIHSVLQHSSCPQNVLFHFVSSDKDANNLLHETISHSFPSLSFQIYPFDDTAVSGLISTSIRSALDCPLNYARNYLANLLPPCVHKVVYLDSDLVLVDDISKLAATPLEDHAVLAAPEYCNANFTSYFTPTFWSNPTLSLTFSGRNACYFNTGVMVIDLERWRKGDYTRKIVEWMELQKRMRIYELGSLPPFLLVFAGNIAPVDHRWNQHGLGGDNYRGLCRDLHPGPVSLLHWSGKGKPWVRLDANRPCPLDALWAPYDLLQTPFLLE*
*********QQFLLLLLFLLIVTATNAATKYKFKEAPQFYNSQNCPNIIINQQGDEDHLINTCSAEAIHVAMTLDAPYLRGSMAAIHSVLQHSSCPQNVLFHFVSSDKDANNLLHETISHSFPSLSFQIYPFDDTAVSGLISTSIRSALDCPLNYARNYLANLLPPCVHKVVYLDSDLVLVDDISKLAATPLEDHAVLAAPEYCNANFTSYFTPTFWSNPTLSLTFSGRNACYFNTGVMVIDLERWRKGDYTRKIVEWMELQKRMRIYELGSLPPFLLVFAGNIAPVDHRWNQHGLGGDNYRGLCRDLHPGPVSLLHWSGKGKPWVRLDANRPCPLDALWAPYDLLQTPFLLES
*****PPHHQQFLLLLLFLLIVTATNAATKYKFKEAPQFYNSQNCPNII********HLINTCSAEAIHVAMTLDAPYLRGSMAAIHSVLQHSSCPQNVLFHFVSSDKDANNLLHETISHSFPSLSFQIYPFDDTAVSGLISTSIRSALDCPLNYARNYLANLLPPCVHKVVYLDSDLVLVDDISKLAATPLEDHAVLAAPEYCNANFTSYFTPTFWSNPTLSLTFSGRNACYFNTGVMVIDLERWRKGDYTRKIVEWMELQKRMRIYELGSLPPFLLVFAGNIAPVDHRWNQHGLGGDNYRGLCRDLHPGPVSLLHWSGKGKPWVRLDANRPCPLDALWAPYDLLQTP*****
iiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MSKTKPPHHQQFLLLLLFLLIVTATNAATKYKFKEAPQFYNSQNCPNIIINQQGDEDHLINTCSAEAIHVAMTLDAPYLRGSMAAIHSVLQHSSCPQNVLFHFVSSDKDANNLLHETISHSFPSLSFQIYPFDDTAVSGLISTSIRSALDCPLNYARNYLANLLPPCVHKVVYLDSDLVLVDDISKLAATPLEDHAVLAAPEYCNANFTSYFTPTFWSNPTLSLTFSGRNACYFNTGVMVIDLERWRKGDYTRKIVEWMELQKRMRIYELGSLPPFLLVFAGNIAPVDHRWNQHGLGGDNYRGLCRDLHPGPVSLLHWSGKGKPWVRLDANRPCPLDALWAPYDLLQTPFLLES
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query354 2.2.26 [Sep-21-2011]
Q9S7G2341 Probable galacturonosyltr yes no 0.949 0.985 0.705 1e-140
Q9LN68351 Probable galacturonosyltr no no 0.912 0.920 0.75 1e-135
O04536390 Probable galacturonosyltr no no 0.906 0.823 0.581 1e-117
O48684393 Probable galacturonosyltr no no 0.889 0.801 0.589 1e-114
O04253346 Probable galacturonosyltr no no 0.853 0.872 0.607 1e-114
Q8VYF4361 Probable galacturonosyltr no no 0.855 0.839 0.617 1e-113
Q9LHD2365 Probable galacturonosyltr no no 0.858 0.832 0.596 1e-113
Q9FWY9361 Probable galacturonosyltr no no 0.858 0.842 0.604 1e-110
Q9M8J2351 Probable galacturonosyltr no no 0.881 0.888 0.571 1e-108
Q0V7R1345 Probable galacturonosyltr no no 0.887 0.910 0.588 1e-102
>sp|Q9S7G2|GATL2_ARATH Probable galacturonosyltransferase-like 2 OS=Arabidopsis thaliana GN=GATL2 PE=2 SV=1 Back     alignment and function desciption
 Score =  499 bits (1286), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 247/350 (70%), Positives = 288/350 (82%), Gaps = 14/350 (4%)

Query: 9   HQQFLLLLLFLLIVTATNAATKYKFKEAPQFYNSQNCPNIIINQQGDEDHLINTCSAEAI 68
           H +F+L L  L + T + A  + +FKEAP+F+NS  C  I    + DED +   CS +AI
Sbjct: 2   HSKFILYLSILAVFTVSFAGGE-RFKEAPKFFNSPECLTI----ENDEDFV---CSDKAI 53

Query: 69  HVAMTLDAPYLRGSMAAIHSVLQHSSCPQNVLFHFVSSDKDANNLLHETISHSFPSLSFQ 128
           HVAMTLD  YLRGSMA I SVLQHSSCPQN++FHFV+S +  ++ L   +  SFP L F+
Sbjct: 54  HVAMTLDTAYLRGSMAVILSVLQHSSCPQNIVFHFVTSKQ--SHRLQNYVVASFPYLKFR 111

Query: 129 IYPFDDTAVSGLISTSIRSALDCPLNYARNYLANLLPPCVHKVVYLDSDLVLVDDISKLA 188
           IYP+D  A+SGLISTSIRSALD PLNYARNYLA++LP C+ +VVYLDSDL+LVDDISKL 
Sbjct: 112 IYPYDVAAISGLISTSIRSALDSPLNYARNYLADILPTCLSRVVYLDSDLILVDDISKLF 171

Query: 189 ATPLEDHAVLAAPEYCNANFTSYFTPTFWSNPTLSLTFS-GRNA--CYFNTGVMVIDLER 245
           +T +    VLAAPEYCNANFT+YFTPTFWSNP+LS+T S  R A  CYFNTGVMVI+L++
Sbjct: 172 STHIPTDVVLAAPEYCNANFTTYFTPTFWSNPSLSITLSLNRRATPCYFNTGVMVIELKK 231

Query: 246 WRKGDYTRKIVEWMELQKRMRIYELGSLPPFLLVFAGNIAPVDHRWNQHGLGGDNYRGLC 305
           WR+GDYTRKI+EWMELQKR+RIYELGSLPPFLLVFAGNIAPVDHRWNQHGLGGDN+RGLC
Sbjct: 232 WREGDYTRKIIEWMELQKRIRIYELGSLPPFLLVFAGNIAPVDHRWNQHGLGGDNFRGLC 291

Query: 306 RDLHPGPVSLLHWSGKGKPWVRLDANRPCPLDALWAPYDLLQTPF-LLES 354
           RDLHPGPVSLLHWSGKGKPWVRLD  RPCPLDALW PYDLL++ F L+ES
Sbjct: 292 RDLHPGPVSLLHWSGKGKPWVRLDDGRPCPLDALWVPYDLLESRFDLIES 341
May be involved in pectin and/or xylans biosynthesis in cell walls.
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 4EC: .EC: 1EC: .EC: -
>sp|Q9LN68|GATL1_ARATH Probable galacturonosyltransferase-like 1 OS=Arabidopsis thaliana GN=GATL1 PE=2 SV=1 Back     alignment and function description
>sp|O04536|GATL9_ARATH Probable galacturonosyltransferase-like 9 OS=Arabidopsis thaliana GN=GATL9 PE=2 SV=1 Back     alignment and function description
>sp|O48684|GATL8_ARATH Probable galacturonosyltransferase-like 8 OS=Arabidopsis thaliana GN=GATL8 PE=2 SV=1 Back     alignment and function description
>sp|O04253|GATL6_ARATH Probable galacturonosyltransferase-like 6 OS=Arabidopsis thaliana GN=GATL6 PE=2 SV=1 Back     alignment and function description
>sp|Q8VYF4|GATL7_ARATH Probable galacturonosyltransferase-like 7 OS=Arabidopsis thaliana GN=GATL7 PE=2 SV=1 Back     alignment and function description
>sp|Q9LHD2|GATLA_ARATH Probable galacturonosyltransferase-like 10 OS=Arabidopsis thaliana GN=GATL10 PE=2 SV=1 Back     alignment and function description
>sp|Q9FWY9|GATL5_ARATH Probable galacturonosyltransferase-like 5 OS=Arabidopsis thaliana GN=GATL5 PE=2 SV=1 Back     alignment and function description
>sp|Q9M8J2|GATL4_ARATH Probable galacturonosyltransferase-like 4 OS=Arabidopsis thaliana GN=GATL4 PE=2 SV=1 Back     alignment and function description
>sp|Q0V7R1|GATL3_ARATH Probable galacturonosyltransferase-like 3 OS=Arabidopsis thaliana GN=GATL3 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query354
225430862351 PREDICTED: probable galacturonosyltransf 0.983 0.991 0.76 1e-155
356495429351 PREDICTED: probable galacturonosyltransf 0.963 0.971 0.747 1e-152
392522238354 glycosyltransferase 8E [Populus tremula 0.923 0.923 0.772 1e-151
224096902352 glycosyltransferase, CAZy family GT8 [Po 0.906 0.911 0.789 1e-151
449487901363 PREDICTED: probable galacturonosyltransf 0.898 0.876 0.796 1e-151
356519066366 PREDICTED: probable galacturonosyltransf 0.903 0.874 0.790 1e-150
449448396352 PREDICTED: LOW QUALITY PROTEIN: probable 0.898 0.903 0.796 1e-150
259563723362 glycosyltransferase family GT8 protein [ 0.909 0.889 0.780 1e-150
359492108388 PREDICTED: probable galacturonosyltransf 0.963 0.878 0.748 1e-149
147780656364 hypothetical protein VITISV_004777 [Viti 0.963 0.936 0.748 1e-149
>gi|225430862|ref|XP_002269182.1| PREDICTED: probable galacturonosyltransferase-like 2-like [Vitis vinifera] Back     alignment and taxonomy information
 Score =  554 bits (1427), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 266/350 (76%), Positives = 299/350 (85%), Gaps = 2/350 (0%)

Query: 7   PHHQQFLLLLLFL--LIVTATNAATKYKFKEAPQFYNSQNCPNIIINQQGDEDHLINTCS 64
           P     L L LFL  +I      AT Y+F+EAPQFYNS +CP+I  +      H  + CS
Sbjct: 2   PATAPLLRLFLFLCGIIYFLAIHATAYQFREAPQFYNSPDCPSINYDDAEGYSHETSICS 61

Query: 65  AEAIHVAMTLDAPYLRGSMAAIHSVLQHSSCPQNVLFHFVSSDKDANNLLHETISHSFPS 124
            +A+HVAMTLDA Y+RGSMAAI SVLQH++CP+NV FHFV+S     + L  TI++SFP 
Sbjct: 62  DDAVHVAMTLDAAYIRGSMAAILSVLQHATCPENVNFHFVASASADAHHLRRTIANSFPY 121

Query: 125 LSFQIYPFDDTAVSGLISTSIRSALDCPLNYARNYLANLLPPCVHKVVYLDSDLVLVDDI 184
           L F++Y FDD+AVSGLISTSIR+ALDCPLNYARNYLA+LLP CV +VVYLDSDLVLVDDI
Sbjct: 122 LRFRVYRFDDSAVSGLISTSIRAALDCPLNYARNYLADLLPTCVRRVVYLDSDLVLVDDI 181

Query: 185 SKLAATPLEDHAVLAAPEYCNANFTSYFTPTFWSNPTLSLTFSGRNACYFNTGVMVIDLE 244
           +KL ATPL DH+VLAAPEYCNANFTSYFTPTFWSNP+LSLTF+GRNACYFNTGVMVIDL+
Sbjct: 182 AKLVATPLGDHSVLAAPEYCNANFTSYFTPTFWSNPSLSLTFAGRNACYFNTGVMVIDLQ 241

Query: 245 RWRKGDYTRKIVEWMELQKRMRIYELGSLPPFLLVFAGNIAPVDHRWNQHGLGGDNYRGL 304
           RWR GDYT KIVEWMELQKRMRIYELGSLPPFLLVFAGNIAPVDH+WNQHGLGGDN+RGL
Sbjct: 242 RWRAGDYTTKIVEWMELQKRMRIYELGSLPPFLLVFAGNIAPVDHKWNQHGLGGDNFRGL 301

Query: 305 CRDLHPGPVSLLHWSGKGKPWVRLDANRPCPLDALWAPYDLLQTPFLLES 354
           CRDLHPGPVSLLHWSGKGKPW RLDANRPCPLDALWAPYDLL+TPF L++
Sbjct: 302 CRDLHPGPVSLLHWSGKGKPWARLDANRPCPLDALWAPYDLLKTPFALDN 351

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|356495429|ref|XP_003516580.1| PREDICTED: probable galacturonosyltransferase-like 2-like [Glycine max] Back     alignment and taxonomy information
>gi|392522238|gb|AFM77985.1| glycosyltransferase 8E [Populus tremula x Populus alba] Back     alignment and taxonomy information
>gi|224096902|ref|XP_002310780.1| glycosyltransferase, CAZy family GT8 [Populus trichocarpa] gi|222853683|gb|EEE91230.1| glycosyltransferase, CAZy family GT8 [Populus trichocarpa] Back     alignment and taxonomy information
>gi|449487901|ref|XP_004157857.1| PREDICTED: probable galacturonosyltransferase-like 2-like, partial [Cucumis sativus] Back     alignment and taxonomy information
>gi|356519066|ref|XP_003528195.1| PREDICTED: probable galacturonosyltransferase-like 1-like [Glycine max] Back     alignment and taxonomy information
>gi|449448396|ref|XP_004141952.1| PREDICTED: LOW QUALITY PROTEIN: probable galacturonosyltransferase-like 2-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|259563723|gb|ACW83060.1| glycosyltransferase family GT8 protein [Populus deltoides] Back     alignment and taxonomy information
>gi|359492108|ref|XP_002281848.2| PREDICTED: probable galacturonosyltransferase-like 1-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|147780656|emb|CAN66819.1| hypothetical protein VITISV_004777 [Vitis vinifera] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query354
TAIR|locus:2016432351 PARVUS "AT1G19300" [Arabidopsi 0.906 0.914 0.677 6.9e-118
TAIR|locus:2101724341 GATL2 "galacturonosyltransfera 0.949 0.985 0.622 1.1e-112
TAIR|locus:2020638390 LGT8 "glucosyl transferase fam 0.906 0.823 0.516 7e-93
TAIR|locus:2081670361 GATL7 "galacturonosyltransfera 0.855 0.839 0.544 3.5e-91
TAIR|locus:2032357393 LGT9 [Arabidopsis thaliana (ta 0.884 0.796 0.526 5.7e-91
TAIR|locus:2095420365 GATL10 "galacturonosyltransfer 0.858 0.832 0.532 2.5e-90
TAIR|locus:2132218346 GATL6 "galacturonosyltransfera 0.793 0.812 0.568 6.5e-90
TAIR|locus:2024740361 GATL5 "galacturonosyltransfera 0.853 0.836 0.528 2e-86
TAIR|locus:2205314345 GATL3 "galacturonosyltransfera 0.887 0.910 0.520 2e-86
TAIR|locus:2082450351 GATL4 "galacturonosyltransfera 0.824 0.831 0.535 4.4e-84
TAIR|locus:2016432 PARVUS "AT1G19300" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1161 (413.8 bits), Expect = 6.9e-118, P = 6.9e-118
 Identities = 221/326 (67%), Positives = 250/326 (76%)

Query:    32 KFKEAPQFYNSQNCPNIIINQQGDEDHLINT--CSAEAIHVAMTLDAPYLRGSMAAIHSV 89
             KFKEAPQFYNS +CP +I + + D+D +     CS  A+HVAMTLDA Y+RGS+AA+ SV
Sbjct:    28 KFKEAPQFYNSADCP-LIDDSESDDDVVAKPIFCSRRAVHVAMTLDAAYIRGSVAAVLSV 86

Query:    90 LQHSSCPQNVLFHFVSS-DKDANNLLHETISHSFPSLSFQIYPFDDTAVSGLISTSIRSA 148
             LQHSSCP+N++FHFV+S   DA++L   TIS SFP L F +Y F+ ++VS LIS+SIRSA
Sbjct:    87 LQHSSCPENIVFHFVASASADASSL-RATISSSFPYLDFTVYVFNVSSVSRLISSSIRSA 145

Query:   149 LDCPXXXXXXXXXXXXPPCVHXXXXXXXXXXXXXXXXXXAATPLEDHAVLAAPEYCNANF 208
             LDCP            PPCV                   AAT L   +VLAAPEYCNANF
Sbjct:   146 LDCPLNYARSYLADLLPPCVRRVVYLDSDLILVDDIAKLAATDLGRDSVLAAPEYCNANF 205

Query:   209 TSYFTPTFWSNPTLSLTFSGRNACYFNTGVMVIDLERWRKGDYTRKIVEWMELQKRMRIY 268
             TSYFT TFWSNPTLSLTF+ R ACYFNTGVMVIDL RWR+G YT +I EWM +QKRMRIY
Sbjct:   206 TSYFTSTFWSNPTLSLTFADRKACYFNTGVMVIDLSRWREGAYTSRIEEWMAMQKRMRIY 265

Query:   269 ELGSLPPFLLVFAGNIAPVDHRWNQHGLGGDNYRGLCRDLHPGPVSLLHWSGKGKPWVRL 328
             ELGSLPPFLLVFAG I PV+HRWNQHGLGGDN+RGLCRDLHPGPVSLLHWSGKGKPW RL
Sbjct:   266 ELGSLPPFLLVFAGLIKPVNHRWNQHGLGGDNFRGLCRDLHPGPVSLLHWSGKGKPWARL 325

Query:   329 DANRPCPLDALWAPYDLLQTPFLLES 354
             DA RPCPLDALWAPYDLLQTPF L+S
Sbjct:   326 DAGRPCPLDALWAPYDLLQTPFALDS 351
GO:0016051 "carbohydrate biosynthetic process" evidence=ISS
GO:0016757 "transferase activity, transferring glycosyl groups" evidence=IEA;ISS
GO:0016758 "transferase activity, transferring hexosyl groups" evidence=ISS
GO:0047262 "polygalacturonate 4-alpha-galacturonosyltransferase activity" evidence=ISS
GO:0010051 "xylem and phloem pattern formation" evidence=IMP
GO:0010417 "glucuronoxylan biosynthetic process" evidence=IMP
GO:0032504 "multicellular organism reproduction" evidence=IMP
GO:0048366 "leaf development" evidence=IMP
GO:0005783 "endoplasmic reticulum" evidence=IDA
GO:0052386 "cell wall thickening" evidence=IMP
GO:0006569 "tryptophan catabolic process" evidence=RCA
GO:0006612 "protein targeting to membrane" evidence=RCA
GO:0009684 "indoleacetic acid biosynthetic process" evidence=RCA
GO:0009863 "salicylic acid mediated signaling pathway" evidence=RCA
GO:0009867 "jasmonic acid mediated signaling pathway" evidence=RCA
GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA
GO:0019344 "cysteine biosynthetic process" evidence=RCA
TAIR|locus:2101724 GATL2 "galacturonosyltransferase-like 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2020638 LGT8 "glucosyl transferase family 8" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2081670 GATL7 "galacturonosyltransferase-like 7" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2032357 LGT9 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2095420 GATL10 "galacturonosyltransferase-like 10" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2132218 GATL6 "galacturonosyltransferase 6" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2024740 GATL5 "galacturonosyltransferase 5" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2205314 GATL3 "galacturonosyltransferase-like 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2082450 GATL4 "galacturonosyltransferase-like 4" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9LN68GATL1_ARATH2, ., 4, ., 1, ., -0.750.91240.9202nono
Q9S7G2GATL2_ARATH2, ., 4, ., 1, ., -0.70570.94910.9853yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer2.4.1LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query354
pfam01501248 pfam01501, Glyco_transf_8, Glycosyl transferase fa 1e-66
cd06429257 cd06429, GT8_like_1, GT8_like_1 represents a subfa 1e-29
cd04194248 cd04194, GT8_A4GalT_like, A4GalT_like proteins cat 1e-28
cd00505246 cd00505, Glyco_transf_8, Members of glycosyltransf 2e-21
PLN02867535 PLN02867, PLN02867, Probable galacturonosyltransfe 3e-20
PLN02829639 PLN02829, PLN02829, Probable galacturonosyltransfe 1e-19
PLN02659534 PLN02659, PLN02659, Probable galacturonosyltransfe 2e-19
PLN02742534 PLN02742, PLN02742, Probable galacturonosyltransfe 2e-19
PLN02910657 PLN02910, PLN02910, polygalacturonate 4-alpha-gala 4e-18
PLN02523559 PLN02523, PLN02523, galacturonosyltransferase 2e-17
PLN02870533 PLN02870, PLN02870, Probable galacturonosyltransfe 3e-17
PLN02718603 PLN02718, PLN02718, Probable galacturonosyltransfe 7e-17
COG1442325 COG1442, RfaJ, Lipopolysaccharide biosynthesis pro 2e-15
PLN02769629 PLN02769, PLN02769, Probable galacturonosyltransfe 3e-12
PRK15171334 PRK15171, PRK15171, lipopolysaccharide 1,3-galacto 5e-06
>gnl|CDD|216536 pfam01501, Glyco_transf_8, Glycosyl transferase family 8 Back     alignment and domain information 
 Score =  210 bits (536), Expect = 1e-66
 Identities = 84/263 (31%), Positives = 129/263 (49%), Gaps = 17/263 (6%)

Query: 69  HVAMTLDAPYLRGSMAAIHSVLQHSSCPQNVLFHFVSSDKDANNLLHETISHSFPSLS-- 126
            + + LD  Y+ G+   I S+L H+S P ++LFH ++ D    N   E ++     +S  
Sbjct: 1   VIVLALDDNYVLGAGVLIKSLLLHNSDPLHLLFHILTDDVSEENR--EKLNALGSQVSEV 58

Query: 127 FQIYPFDDTAVSGLISTSIRSALDCPLNYARNYLANLLPPCVHKVVYLDSDLVLVDDISK 186
             +   D   +S L    +       LNYAR YLA+L P    K++YLD+D++++ D+ +
Sbjct: 59  DVLEFSDIEMLSYLTLQLLLKKYWSLLNYARLYLADLFP-KYDKILYLDADIIVLGDLDE 117

Query: 187 LAATPLEDHAVLAAPEYCNANFTSYFTPTFWSNPTLSLTFSGRNACYFNTGVMVIDLERW 246
           L    L    V AA E              W    LS        CYFN GV+VI+L++W
Sbjct: 118 LFDIDLGGK-VAAAVEDF--------DRYPWFKEALSAELGIPPPCYFNAGVLVINLKKW 168

Query: 247 RKGDYTRKIVEWMELQKRMRIYELGSLPPFLLVFAGNIAPVDHRWNQHGLGGDNYRGLCR 306
           R+ + T K++EW  L K   + +LG      +VF G + P+  R+N HGLG  +Y+   R
Sbjct: 169 REENLTEKLIEW--LNKNGGLLKLGDQDILNIVFKGKVKPLPPRYNVHGLGYYSYK-KRR 225

Query: 307 DLHPGPVSLLHWSGKGKPWVRLD 329
            L P    ++H+ G  KPW  L 
Sbjct: 226 KLIPENPKVIHYIGPTKPWHDLA 248

This family includes enzymes that transfer sugar residues to donor molecules. Members of this family are involved in lipopolysaccharide biosynthesis and glycogen synthesis. This family includes Lipopolysaccharide galactosyltransferase, lipopolysaccharide glucosyltransferase 1, and glycogenin glucosyltransferase. Length = 248
>gnl|CDD|133051 cd06429, GT8_like_1, GT8_like_1 represents a subfamily of GT8 with unknown function Back     alignment and domain information
>gnl|CDD|133037 cd04194, GT8_A4GalT_like, A4GalT_like proteins catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface Back     alignment and domain information
>gnl|CDD|132996 cd00505, Glyco_transf_8, Members of glycosyltransferase family 8 (GT-8) are involved in lipopolysaccharide biosynthesis and glycogen synthesis Back     alignment and domain information
>gnl|CDD|178458 PLN02867, PLN02867, Probable galacturonosyltransferase Back     alignment and domain information
>gnl|CDD|215443 PLN02829, PLN02829, Probable galacturonosyltransferase Back     alignment and domain information
>gnl|CDD|215356 PLN02659, PLN02659, Probable galacturonosyltransferase Back     alignment and domain information
>gnl|CDD|215395 PLN02742, PLN02742, Probable galacturonosyltransferase Back     alignment and domain information
>gnl|CDD|215493 PLN02910, PLN02910, polygalacturonate 4-alpha-galacturonosyltransferase Back     alignment and domain information
>gnl|CDD|215286 PLN02523, PLN02523, galacturonosyltransferase Back     alignment and domain information
>gnl|CDD|215468 PLN02870, PLN02870, Probable galacturonosyltransferase Back     alignment and domain information
>gnl|CDD|178320 PLN02718, PLN02718, Probable galacturonosyltransferase Back     alignment and domain information
>gnl|CDD|224359 COG1442, RfaJ, Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>gnl|CDD|215412 PLN02769, PLN02769, Probable galacturonosyltransferase Back     alignment and domain information
>gnl|CDD|185093 PRK15171, PRK15171, lipopolysaccharide 1,3-galactosyltransferase; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 354
PRK15171334 lipopolysaccharide 1,3-galactosyltransferase; Prov 100.0
cd06429257 GT8_like_1 GT8_like_1 represents a subfamily of GT 100.0
PLN02718603 Probable galacturonosyltransferase 100.0
PLN02742534 Probable galacturonosyltransferase 100.0
PLN02829639 Probable galacturonosyltransferase 100.0
PLN02523559 galacturonosyltransferase 100.0
PLN02910657 polygalacturonate 4-alpha-galacturonosyltransferas 100.0
PLN02870533 Probable galacturonosyltransferase 100.0
cd06431280 GT8_LARGE_C LARGE catalytic domain has closest hom 100.0
PLN02769629 Probable galacturonosyltransferase 100.0
PLN02659534 Probable galacturonosyltransferase 100.0
PLN02867535 Probable galacturonosyltransferase 100.0
cd00505246 Glyco_transf_8 Members of glycosyltransferase fami 100.0
cd04194248 GT8_A4GalT_like A4GalT_like proteins catalyze the 100.0
COG1442325 RfaJ Lipopolysaccharide biosynthesis proteins, LPS 100.0
PF01501250 Glyco_transf_8: Glycosyl transferase family 8; Int 100.0
cd06430304 GT8_like_2 GT8_like_2 represents a subfamily of GT 100.0
cd06432248 GT8_HUGT1_C_like The C-terminal domain of HUGT1-li 100.0
PLN00176333 galactinol synthase 99.97
cd02537240 GT8_Glycogenin Glycogenin belongs the GT 8 family 99.97
cd06914278 GT8_GNT1 GNT1 is a fungal enzyme that belongs to t 99.92
KOG18791470 consensus UDP-glucose:glycoprotein glucosyltransfe 99.45
COG5597368 Alpha-N-acetylglucosamine transferase [Cell envelo 98.93
PF03407212 Nucleotid_trans: Nucleotide-diphospho-sugar transf 97.32
PF11051271 Mannosyl_trans3: Mannosyltransferase putative; Int 97.05
PLN03182429 xyloglucan 6-xylosyltransferase; Provisional 96.31
PF05637239 Glyco_transf_34: galactosyl transferase GMA12/MNN1 94.75
cd02515271 Glyco_transf_6 Glycosyltransferase family 6 compri 93.98
KOG1950369 consensus Glycosyl transferase, family 8 - glycoge 90.51
KOG1928409 consensus Alpha-1,4-N-acetylglucosaminyltransferas 89.27
PF03414337 Glyco_transf_6: Glycosyltransferase family 6; Inte 88.14
PF00535169 Glycos_transf_2: Glycosyl transferase family 2; In 83.86
>PRK15171 lipopolysaccharide 1,3-galactosyltransferase; Provisional Back     alignment and domain information 
Probab=100.00  E-value=1.1e-50  Score=391.36  Aligned_cols=267  Identities=19%  Similarity=0.320  Sum_probs=199.0

Q ss_pred             CCceEEEEEeCccchhchHHHHHHHHHhcCCCCcEEEEEEeCCCCch-HHHHHHHHhhCCCeeEEEEEcCCccccccccc
Q 018567           65 AEAIHVAMTLDAPYLRGSMAAIHSVLQHSSCPQNVLFHFVSSDKDAN-NLLHETISHSFPSLSFQIYPFDDTAVSGLIST  143 (354)
Q Consensus        65 ~~~i~I~~~~D~~yl~~~~v~i~Sil~~~~~~~~i~fhil~~~~s~~-~~l~~~l~~~~p~~~~~~~~~d~~~~~~~is~  143 (354)
                      ++.||||+++|++|+.+++|+|.||++|+++ ..++|||++++++++ .+..+.+.+.++ .+++++.+|.+.+.+..+.
T Consensus        23 ~~~i~Iv~~~D~ny~~~~~vsi~Sil~nn~~-~~~~f~Il~~~is~e~~~~l~~l~~~~~-~~i~~~~id~~~~~~~~~~  100 (334)
T PRK15171         23 KNSLDIAYGIDKNFLFGCGVSIASVLLNNPD-KSLVFHVFTDYISDADKQRFSALAKQYN-TRINIYLINCERLKSLPST  100 (334)
T ss_pred             CCceeEEEECcHhhHHHHHHHHHHHHHhCCC-CCEEEEEEeCCCCHHHHHHHHHHHHhcC-CeEEEEEeCHHHHhCCccc
Confidence            3689999999999999999999999999875 579999999999972 112223333454 4788899887766654332


Q ss_pred             chhcccCCcchhHHHhhhhhcCCCCCeEEEEeccEEEecChHhhhccCCCCCcEEEeecccccCcccccCCCCCCCcccc
Q 018567          144 SIRSALDCPLNYARNYLANLLPPCVHKVVYLDSDLVLVDDISKLAATPLEDHAVLAAPEYCNANFTSYFTPTFWSNPTLS  223 (354)
Q Consensus       144 ~~~~~~~~~~~y~Rl~l~~llp~~v~RvLYLDsD~IV~~DI~~L~~~dl~~~~~~aa~e~~~~~~~~y~~~~~w~~~~~~  223 (354)
                          .+.+..+|+||++|++||++++||||||+|+||++||++||++||+++.++||+.++...        .|..+...
T Consensus       101 ----~~~s~atY~Rl~ip~llp~~~dkvLYLD~Diiv~~dl~~L~~~dl~~~~~aav~~d~~~~--------~~~~~~~~  168 (334)
T PRK15171        101 ----KNWTYATYFRFIIADYFIDKTDKVLYLDADIACKGSIKELIDLDFAENEIAAVVAEGDAE--------WWSKRAQS  168 (334)
T ss_pred             ----CcCCHHHHHHHHHHHhhhhhcCEEEEeeCCEEecCCHHHHHhccCCCCeEEEEEeccchh--------HHHHHHHh
Confidence                356678999999999999779999999999999999999999999867777766543211        12222212


Q ss_pred             cccCCCCCccceeeeEEEechHHhhhchHHHHHHHHHHhccccCCCCCCccHHHHhhcCCeEecCcccccCCCCCCcccc
Q 018567          224 LTFSGRNACYFNTGVMVIDLERWRKGDYTRKIVEWMELQKRMRIYELGSLPPFLLVFAGNIAPVDHRWNQHGLGGDNYRG  303 (354)
Q Consensus       224 ~~~~~~~~~yFNsGVmlinl~~wR~~~~~~~~~~~~~~~~~~~~~~~~DQd~LN~vf~~~i~~L~~~wN~~~~~~~~~~~  303 (354)
                      .+..+....|||||||||||++||++++++++++++........+.++|||+||.+|.|+++.||.+||++.........
T Consensus       169 l~~~~~~~~YFNsGVlliNl~~wRe~~i~~k~~~~l~~~~~~~~~~~~DQDiLN~~~~~~~~~L~~~wN~~~~~~~~~~~  248 (334)
T PRK15171        169 LQTPGLASGYFNSGFLLINIPAWAQENISAKAIEMLADPEIVSRITHLDQDVLNILLAGKVKFIDAKYNTQFSLNYELKD  248 (334)
T ss_pred             cCCccccccceecceEEEcHHHHHHhhHHHHHHHHHhccccccceeecChhHHHHHHcCCeEECCHhhCCccchhHHHHh
Confidence            22212124699999999999999999999999999875321122357999999999999999999999987421111111


Q ss_pred             ccccCCCCCCEEEeccCCCCCCCCCCCCCCCCchhccccccccCC
Q 018567          304 LCRDLHPGPVSLLHWSGKGKPWVRLDANRPCPLDALWAPYDLLQT  348 (354)
Q Consensus       304 ~~~~l~~~~~~IiHy~g~~KPW~~~~~~~~~~~~~lW~~Y~~~~~  348 (354)
                      .+......+++||||+|+.|||+....   +|..++||.|...+|
T Consensus       249 ~~~~~~~~~p~IIHy~G~~KPW~~~~~---~~~~~~f~~~~~~sp  290 (334)
T PRK15171        249 SVINPVNDETVFIHYIGPTKPWHSWAD---YPVSQYFLKAKEASP  290 (334)
T ss_pred             cccccccCCCEEEEECCCCCCCCCCCC---CchHHHHHHHHhcCC
Confidence            111111245799999999999987543   467899999988765

>cd06429 GT8_like_1 GT8_like_1 represents a subfamily of GT8 with unknown function Back     alignment and domain information
>PLN02718 Probable galacturonosyltransferase Back     alignment and domain information
>PLN02742 Probable galacturonosyltransferase Back     alignment and domain information
>PLN02829 Probable galacturonosyltransferase Back     alignment and domain information
>PLN02523 galacturonosyltransferase Back     alignment and domain information
>PLN02910 polygalacturonate 4-alpha-galacturonosyltransferase Back     alignment and domain information
>PLN02870 Probable galacturonosyltransferase Back     alignment and domain information
>cd06431 GT8_LARGE_C LARGE catalytic domain has closest homology to GT8 glycosyltransferase involved in lipooligosaccharide synthesis Back     alignment and domain information
>PLN02769 Probable galacturonosyltransferase Back     alignment and domain information
>PLN02659 Probable galacturonosyltransferase Back     alignment and domain information
>PLN02867 Probable galacturonosyltransferase Back     alignment and domain information
>cd00505 Glyco_transf_8 Members of glycosyltransferase family 8 (GT-8) are involved in lipopolysaccharide biosynthesis and glycogen synthesis Back     alignment and domain information
>cd04194 GT8_A4GalT_like A4GalT_like proteins catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface Back     alignment and domain information
>COG1442 RfaJ Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>PF01501 Glyco_transf_8: Glycosyl transferase family 8; InterPro: IPR002495 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases Back     alignment and domain information
>cd06430 GT8_like_2 GT8_like_2 represents a subfamily of GT8 with unknown function Back     alignment and domain information
>cd06432 GT8_HUGT1_C_like The C-terminal domain of HUGT1-like is highly homologous to the GT 8 family Back     alignment and domain information
>PLN00176 galactinol synthase Back     alignment and domain information
>cd02537 GT8_Glycogenin Glycogenin belongs the GT 8 family and initiates the biosynthesis of glycogen Back     alignment and domain information
>cd06914 GT8_GNT1 GNT1 is a fungal enzyme that belongs to the GT 8 family Back     alignment and domain information
>KOG1879 consensus UDP-glucose:glycoprotein glucosyltransferase [Carbohydrate transport and metabolism] Back     alignment and domain information
>COG5597 Alpha-N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>PF03407 Nucleotid_trans: Nucleotide-diphospho-sugar transferase; InterPro: IPR005069 Proteins in this family have been been predicted to be nucleotide-diphospho-sugar transferases [] Back     alignment and domain information
>PF11051 Mannosyl_trans3: Mannosyltransferase putative; InterPro: IPR022751 Alpha-mannosyltransferase is responsible for the addition of residues to the outer chain of core N-linked polysaccharides and to O-linked mannotriose Back     alignment and domain information
>PLN03182 xyloglucan 6-xylosyltransferase; Provisional Back     alignment and domain information
>PF05637 Glyco_transf_34: galactosyl transferase GMA12/MNN10 family; InterPro: IPR008630 This family contains a number of glycosyltransferase enzymes that contain a DXD motif Back     alignment and domain information
>cd02515 Glyco_transf_6 Glycosyltransferase family 6 comprises enzymes responsible for the production of the human ABO blood group antigens Back     alignment and domain information
>KOG1950 consensus Glycosyl transferase, family 8 - glycogenin [Carbohydrate transport and metabolism] Back     alignment and domain information
>KOG1928 consensus Alpha-1,4-N-acetylglucosaminyltransferase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF03414 Glyco_transf_6: Glycosyltransferase family 6; InterPro: IPR005076 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases Back     alignment and domain information
>PF00535 Glycos_transf_2: Glycosyl transferase family 2; InterPro: IPR001173 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query354
1g9r_A311 Crystal Structure Of Galactosyltransferase Lgtc In 1e-04
1ss9_A311 Crystal Structural Analysis Of Active Site Mutant Q 1e-04
>pdb|1G9R|A Chain A, Crystal Structure Of Galactosyltransferase Lgtc In Complex With Mn And Udp-2f-Galactose Length = 311 Back     alignment and structure 
Iteration: 1

 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 31/104 (29%), Positives = 51/104 (49%), Gaps = 9/104 (8%)
Query: 233 YFNTGVMVIDLERWRKGDYTRKIVEWMELQKRMRIYE----LGSLPPFLLVFAG---NIA 285
           YFN GV++I+L++WR+ D  +   EW+E  K +  Y+    L  L    + +A    N  
Sbjct: 151 YFNAGVLLINLKKWRRHDIFKXSSEWVEQYKDVXQYQDQDILNGLFKGGVCYANSRFNFX 210
Query: 286 PVDHRWNQHGLGGDNYRGLCRDL--HPGPVSLLHWSGKGKPWVR 327
           P ++ +  +     +   L RD      PV++ H+ G  KPW R
Sbjct: 211 PTNYAFXANWFASRHTDPLYRDRTNTVXPVAVSHYCGPAKPWHR 254
>pdb|1SS9|A Chain A, Crystal Structural Analysis Of Active Site Mutant Q189e Of Lgtc Length = 311 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query354
1g9r_A311 Glycosyl transferase; alpha-beta structure; HET: U 3e-63
3tzt_A276 Glycosyl transferase family 8; structural genomics 4e-51
>1g9r_A Glycosyl transferase; alpha-beta structure; HET: UPF; 2.00A {Neisseria meningitidis} SCOP: c.68.1.4 PDB: 1ga8_A* 1ss9_A* Length = 311 Back     alignment and structure
 Score =  203 bits (517), Expect = 3e-63
 Identities = 54/287 (18%), Positives = 97/287 (33%), Gaps = 31/287 (10%)

Query: 68  IHVAMTLDAPYLRGSMAAIHSVLQHSSCPQNVLFHFVSSDKDANNLLHETISHSFPSLSF 127
           + +    D  Y      A  SV         + FH + +     N      +      + 
Sbjct: 1   MDIVFAADDNYAAYLCVAAKSVEAAHP-DTEIRFHVLDAGISEANRAAVAANLRGGGGNI 59

Query: 128 QIYPFDDTAVSGLISTSIRSALDCPLNYARNYLANLLPPCVHKVVYLDSDLVLVDDISKL 187
           +    +    +G     +         YAR  L   +     KV+YLD D+++ D ++ L
Sbjct: 60  RFIDVNPEDFAGF---PLNIRHISITTYARLKLGEYIA-DCDKVLYLDIDVLVRDSLTPL 115

Query: 188 AATPLEDHAVLAAPEYCNANFTSYFTPTFWSNPTLSLTFSGRNACYFNTGVMVIDLERWR 247
             T L D+ + A+ +        Y      ++             YFN GV++I+L++WR
Sbjct: 116 WDTDLGDNWLGASIDLFVERQEGYKQKIGMADG----------EYYFNAGVLLINLKKWR 165

Query: 248 KGDYTRKIVEWMELQKRMRIYELGSLPPFLLVFAGNIAPVDHRWNQHGLGGDNYRGLCRD 307
           + D  +   EW+E  K +  Y+   +     +F G +   + R+N               
Sbjct: 166 RHDIFKMSSEWVEQYKDVMQYQDQDILNG--LFKGGVCYANSRFNFMPTNYAFMANWFAS 223

Query: 308 LHPGP-----------VSLLHWSGKGKPWVRLDANRPCPLDALWAPY 343
            H  P           V++ H+ G  KPW R            +   
Sbjct: 224 RHTDPLYRDRTNTVMPVAVSHYCGPAKPWHRDCTA---WGAERFTEL 267
>3tzt_A Glycosyl transferase family 8; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, putative glycosyl transferase; HET: MSE CIT; 2.10A {Anaerococcus prevotii} Length = 276 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query354
3tzt_A276 Glycosyl transferase family 8; structural genomics 100.0
1g9r_A311 Glycosyl transferase; alpha-beta structure; HET: U 100.0
1ll2_A333 Glycogenin-1; protein-substrate complex, beta-alph 99.97
3u2u_A263 Glycogenin-1, GN-1, GN1; structural genomics, stru 99.97
1o7q_A289 N-acetyllactosaminide alpha-1,3- galactosyltransfe 93.01
3ioh_A298 Histo-blood group ABO system transferase; GTA, cis 89.03
4ayl_A246 BOGT-metal-independent glycosyltransferase; histo- 85.67
1xhb_A 472 Polypeptide N-acetylgalactosaminyltransferase 1; g 81.88
>3tzt_A Glycosyl transferase family 8; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, putative glycosyl transferase; HET: MSE CIT; 2.10A {Anaerococcus prevotii} SCOP: c.68.1.0 Back     alignment and structure
Probab=100.00  E-value=4e-49  Score=370.79  Aligned_cols=260  Identities=20%  Similarity=0.301  Sum_probs=182.2

Q ss_pred             ceEEEEEeCccchhchHHHHHHHHHhcCCCCcEEEEEEeCCCCch--HHHHHHHHhhCCCeeEEEEEcCCcccccccccc
Q 018567           67 AIHVAMTLDAPYLRGSMAAIHSVLQHSSCPQNVLFHFVSSDKDAN--NLLHETISHSFPSLSFQIYPFDDTAVSGLISTS  144 (354)
Q Consensus        67 ~i~I~~~~D~~yl~~~~v~i~Sil~~~~~~~~i~fhil~~~~s~~--~~l~~~l~~~~p~~~~~~~~~d~~~~~~~is~~  144 (354)
                      .|||++++|++|+++++|+++||++|+++ ++++|||++++++++  +.+++.+. .+ +.+++++.++.+.+.+...  
T Consensus         5 ~i~I~~~~d~~Y~~~~~v~i~Sl~~~~~~-~~~~~~il~~~is~~~~~~L~~~~~-~~-~~~i~~~~~~~~~~~~~~~--   79 (276)
T 3tzt_A            5 ADALLLTLDENYIPQMKVLMTSIYINNPG-RIFDVYLIHSRISEDKLKDLGEDLK-KF-SYTLYPIRATDDLFSFAKV--   79 (276)
T ss_dssp             CEEEEEECCGGGHHHHHHHHHHHHHHSTT-CCEEEEEEESCCCHHHHHHHHHHHH-TT-TCEEEEEECC-----------
T ss_pred             eEEEEEEeCHhHHHHHHHHHHHHHHhCCC-CceEEEEEeCCCCHHHHHHHHHHHH-Hc-CCEEEEEEeCHHHHhcCcc--
Confidence            59999999999999999999999999985 689999999999872  22333322 22 4578888888765554322  


Q ss_pred             hhcccCCcchhHHHhhhhhcCCCCCeEEEEeccEEEecChHhhhccCCCCCcEEEeecccccC-cccccCCCCCCCcccc
Q 018567          145 IRSALDCPLNYARNYLANLLPPCVHKVVYLDSDLVLVDDISKLAATPLEDHAVLAAPEYCNAN-FTSYFTPTFWSNPTLS  223 (354)
Q Consensus       145 ~~~~~~~~~~y~Rl~l~~llp~~v~RvLYLDsD~IV~~DI~~L~~~dl~~~~~~aa~e~~~~~-~~~y~~~~~w~~~~~~  223 (354)
                        ..+.++.+|+||++++++|++++||||||+|+||++||++||++|++ ++.+||+++|... +.+++    +     .
T Consensus        80 --~~~~s~~~~~rl~~~~l~p~~~~kvlylD~D~iv~~di~~L~~~dl~-~~~~aav~d~~~~~~~~~~----~-----~  147 (276)
T 3tzt_A           80 --TDRYPKEMYYRLLAGEFLPENLGEILYLDPDMLVINPLDDLLRTDIS-DYILAAASHTGKTDMANNV----N-----R  147 (276)
T ss_dssp             ------CHHHHHHHTHHHHSCTTCCEEEEECSSEEECSCSHHHHTCCCT-TSSEEEEEC---------------------
T ss_pred             --ccccCHHHHHHHHHHHHcccccCeEEEEeCCeeecCCHHHHhhcCCC-CCeEEEEEecccchHHHHH----H-----H
Confidence              13456789999999999997799999999999999999999999998 7777887777532 11111    1     1


Q ss_pred             cccCCCCCccceeeeEEEechHHhhhchHHHHHHHHHHhccccCCCCCCccHHHHhhcCCeEecCc-ccccCCCCCCc--
Q 018567          224 LTFSGRNACYFNTGVMVIDLERWRKGDYTRKIVEWMELQKRMRIYELGSLPPFLLVFAGNIAPVDH-RWNQHGLGGDN--  300 (354)
Q Consensus       224 ~~~~~~~~~yFNsGVmlinl~~wR~~~~~~~~~~~~~~~~~~~~~~~~DQd~LN~vf~~~i~~L~~-~wN~~~~~~~~--  300 (354)
                      ..+. ...+||||||||||+++||+.++++++++|++.++. + +.++|||+||.+|.|+++.||+ +||++......  
T Consensus       148 ~~l~-~~~~yfNsGV~linl~~~R~~~~~~~~~~~~~~~~~-~-~~~~DQd~LN~~f~~~~~~Lp~~~wN~~~~~~~~~~  224 (276)
T 3tzt_A          148 IRLG-TDTDYYNSGLLLINLKRAREEIDPDEIFSFVEDNHM-N-LLLPDQDILNAMYGDRIYPLDDLIYNYDARNYSSYL  224 (276)
T ss_dssp             ---------CEEEEEEEEEHHHHHHHCCHHHHHHHHHHC----------CHHHHHHHGGGEEEEEHHHHSEETTCHHHHH
T ss_pred             hcCC-CCCCeEEeeEEEEEHHHHHhhhHHHHHHHHHHhccc-c-ccCCChhHHHHHHhCCEEECCchheeeecccchhhh
Confidence            1221 235999999999999999999999999999986442 2 2569999999999999999999 99998621100  


Q ss_pred             cccc-cccC--CCCCCEEEeccCCCCCCCCCCCCCCCCchhccccccccCCC
Q 018567          301 YRGL-CRDL--HPGPVSLLHWSGKGKPWVRLDANRPCPLDALWAPYDLLQTP  349 (354)
Q Consensus       301 ~~~~-~~~l--~~~~~~IiHy~g~~KPW~~~~~~~~~~~~~lW~~Y~~~~~~  349 (354)
                      .... ..+.  ..+.++||||+|+.|||+..+..   +++++||.|..+..+
T Consensus       225 ~~~~~~~~~~~~~~~~~iiHy~g~~KPW~~~~~~---~~~~~w~~Y~~~~~~  273 (276)
T 3tzt_A          225 IRSKKQADLAWLMDHTVVLHFCGRDKPWKKNHRN---KFTSLYKHYMSLTKR  273 (276)
T ss_dssp             HHTTTCCSHHHHHHHCCEEECCSSCCTTSTTCCS---TTHHHHHHHHHHHHH
T ss_pred             ccccchhhhhhhccCCeEEEECCCCCCcCCCCCC---chHHHHHHHHHHHHH
Confidence            0000 0000  11347999999999999987654   599999999876544
>1g9r_A Glycosyl transferase; alpha-beta structure; HET: UPF; 2.00A {Neisseria meningitidis} SCOP: c.68.1.4 PDB: 1ga8_A* 1ss9_A* Back     alignment and structure
>1ll2_A Glycogenin-1; protein-substrate complex, beta-alpha-beta rossman-like NUCL binding fold, DXD motif, non-proline CIS peptide bond, TRAN; HET: UPG; 1.90A {Oryctolagus cuniculus} SCOP: c.68.1.14 PDB: 1ll3_A 1ll0_A 1zcv_A 1zcu_A 1zdf_A* 1zcy_A 1zdg_A* Back     alignment and structure
>3u2u_A Glycogenin-1, GN-1, GN1; structural genomics, structural genomics consortium, SGC, transferase, glycosyltransferase, glycogen biosynthesis; HET: GLC UDP; 1.45A {Homo sapiens} SCOP: c.68.1.14 PDB: 3t7n_A* 3t7o_A* 3t7m_A* 3u2v_A* 3u2x_A* 3u2t_A 3rmv_A* 3rmw_A* 3u2w_A* 3qvb_A* 3q4s_A* 1zct_A* 3v8y_A 3v8z_A* 3usr_A 3v90_A 3v91_A* 3usq_A Back     alignment and structure
>1o7q_A N-acetyllactosaminide alpha-1,3- galactosyltransferase; 3-galactosyltransferase-UDP complex, glycosyltransferase, glycoprotein, transmembrane; HET: GAL NAG UDP; 1.3A {Bos taurus} SCOP: c.68.1.9 PDB: 1gwv_A* 1gx0_A* 1gww_A* 1k4v_A* 1gx4_A* 2jco_A 1g8o_A* 1fg5_N* 1g93_A* 2wgz_A* 1o7o_A* 2vs4_A* 2jck_A* 2jcl_A 2vfz_A* 2vs3_A* 1vzu_A* 1vzx_A* 1vzt_A* 2jcj_A* ... Back     alignment and structure
>3ioh_A Histo-blood group ABO system transferase; GTA, cisab mutant, AA(Gly)B, rossman fold, unliganded, conformation, blood group antigen, glycoprotein; HET: GOL; 1.25A {Homo sapiens} SCOP: c.68.1.9 PDB: 3ioi_A* 3ioj_A* 3u0y_A* 3u0x_A* 1zhj_A* 2o1h_A* 2o1g_A* 3sx5_A* 3sx3_A* 2o1f_A 2rj6_A* 2rj5_A* 2rj7_A* 1zi4_A* 2y7a_A* 3sxb_A* 3sxa_A* 2riz_A 2rj0_A* 2rj1_A* ... Back     alignment and structure
>4ayl_A BOGT-metal-independent glycosyltransferase; histo-blood group enzyme; HET: EPE; 1.92A {Bacteroides ovatus} PDB: 4ayj_A* Back     alignment and structure
>1xhb_A Polypeptide N-acetylgalactosaminyltransferase 1; glycosyltransferase-A (GT-A); HET: NAG BMA; 2.50A {Mus musculus} SCOP: b.42.2.1 c.68.1.17 Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 354
d1ga8a_282 c.68.1.4 (A:) Galactosyltransferase LgtC {Neisseri 1e-33
d1ll2a_263 c.68.1.14 (A:) Glycogenin {Rabbit (Oryctolagus cun 2e-08
>d1ga8a_ c.68.1.4 (A:) Galactosyltransferase LgtC {Neisseria meningitidis [TaxId: 487]} Length = 282 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: Nucleotide-diphospho-sugar transferases
superfamily: Nucleotide-diphospho-sugar transferases
family: Galactosyltransferase LgtC
domain: Galactosyltransferase LgtC
species: Neisseria meningitidis [TaxId: 487]

 Score =  123 bits (309), Expect = 1e-33
 Identities = 54/271 (19%), Positives = 93/271 (34%), Gaps = 28/271 (10%)

Query: 68  IHVAMTLDAPYLRGSMAAIHSVLQHSSCPQNVLFHFVSSDKDANNLLHETISHSFPSLSF 127
           + +    D  Y      A  SV         + FH + +     N      +      + 
Sbjct: 1   MDIVFAADDNYAAYLCVAAKSVEAAHP-DTEIRFHVLDAGISEANRAAVAANLRGGGGNI 59

Query: 128 QIYPFDDTAVSGLISTSIRSALDCPLNYARNYLANLLPPCVHKVVYLDSDLVLVDDISKL 187
           +    +    +G        +      YAR  L         KV+YLD D+++ D ++ L
Sbjct: 60  RFIDVNPEDFAGFPLNIRHIS---ITTYARLKLGEY-IADCDKVLYLDIDVLVRDSLTPL 115

Query: 188 AATPLEDHAVLAAPEYCNANFTSYFTPTFWSNPTLSLTFSGRNACYFNTGVMVIDLERWR 247
             T L D+ + A+ +        Y      ++             YFN GV++I+L++WR
Sbjct: 116 WDTDLGDNWLGASIDLFVERQEGYKQKIGMADGE----------YYFNAGVLLINLKKWR 165

Query: 248 KGDYTRKIVEWMELQKRMRIYELGSLPPFLLVFAGNIAPVDHRWNQHGLGGDNYRGLCRD 307
           + D  +   EW+E  K +  Y          +F G +   + R+N               
Sbjct: 166 RHDIFKMSSEWVEQYKDVMQY--QDQDILNGLFKGGVCYANSRFNFMPTNYAFMANWFAS 223

Query: 308 LHP-----------GPVSLLHWSGKGKPWVR 327
            H             PV++ H+ G  KPW R
Sbjct: 224 RHTDPLYRDRTNTVMPVAVSHYCGPAKPWHR 254
>d1ll2a_ c.68.1.14 (A:) Glycogenin {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 263 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query354
d1ga8a_282 Galactosyltransferase LgtC {Neisseria meningitidis 100.0
d1ll2a_263 Glycogenin {Rabbit (Oryctolagus cuniculus) [TaxId: 99.96
d1lzia_283 Glycosyltransferase A catalytic domain {Human (Hom 96.66
d1o7qa_287 alpha-1,3-galactosyltransferase catalytic domain { 96.42
d1xhba2328 Polypeptide N-acetylgalactosaminyltransferase 1, N 90.97
d1s4na_339 Glycolipid 2-alpha-mannosyltransferase {Baker's ye 83.16
>d1ga8a_ c.68.1.4 (A:) Galactosyltransferase LgtC {Neisseria meningitidis [TaxId: 487]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Nucleotide-diphospho-sugar transferases
superfamily: Nucleotide-diphospho-sugar transferases
family: Galactosyltransferase LgtC
domain: Galactosyltransferase LgtC
species: Neisseria meningitidis [TaxId: 487]

Probab=100.00  E-value=9.5e-46  Score=345.57  Aligned_cols=258  Identities=21%  Similarity=0.290  Sum_probs=191.0

Q ss_pred             eEEEEEeCccchhchHHHHHHHHHhcCCCCcEEEEEEeCCCCchHHHHHHHHhhC--CCeeEEEEEcCCcccccccccch
Q 018567           68 IHVAMTLDAPYLRGSMAAIHSVLQHSSCPQNVLFHFVSSDKDANNLLHETISHSF--PSLSFQIYPFDDTAVSGLISTSI  145 (354)
Q Consensus        68 i~I~~~~D~~yl~~~~v~i~Sil~~~~~~~~i~fhil~~~~s~~~~l~~~l~~~~--p~~~~~~~~~d~~~~~~~is~~~  145 (354)
                      ||||+++|++|+.++.|+++||++|++. ++++|||+++++++  +.++.+++..  ...+++++.++...+.....   
T Consensus         1 mnIv~~~D~nY~~~~~~~i~SL~~~~~~-~~~~~~il~~~~~~--~~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~~---   74 (282)
T d1ga8a_           1 MDIVFAADDNYAAYLCVAAKSVEAAHPD-TEIRFHVLDAGISE--ANRAAVAANLRGGGGNIRFIDVNPEDFAGFPL---   74 (282)
T ss_dssp             CEEEEEECGGGHHHHHHHHHHHHHHCTT-SCCEEEEEESSCCH--HHHHHHHHTSGGGTTTEEEEECCGGGGTTSCC---
T ss_pred             CEEEEECCHHHHHHHHHHHHHHHHHCcC-CCEEEEEEcCCCCH--HHHHHHHHHHHHcCCeEEEEECCchHhccccc---
Confidence            7999999999999999999999999874 68999999999997  3333443322  23467788877655543321   


Q ss_pred             hcccCCcchhHHHhhhhhcCCCCCeEEEEeccEEEecChHhhhccCCCCCcEEEeecccccCcccccCCCCCCCcccccc
Q 018567          146 RSALDCPLNYARNYLANLLPPCVHKVVYLDSDLVLVDDISKLAATPLEDHAVLAAPEYCNANFTSYFTPTFWSNPTLSLT  225 (354)
Q Consensus       146 ~~~~~~~~~y~Rl~l~~llp~~v~RvLYLDsD~IV~~DI~~L~~~dl~~~~~~aa~e~~~~~~~~y~~~~~w~~~~~~~~  225 (354)
                      ...+.++.+|+||+++++||+ ++||||||+|+||++||++||+++++ ++.+||+.++.......     |   .-..+
T Consensus        75 ~~~~~s~~~y~Rl~l~~~lp~-~~kiiyLD~D~iv~~dl~~L~~~~~~-~~~~aa~~d~~~~~~~~-----~---~~~~~  144 (282)
T d1ga8a_          75 NIRHISITTYARLKLGEYIAD-CDKVLYLDIDVLVRDSLTPLWDTDLG-DNWLGASIDLFVERQEG-----Y---KQKIG  144 (282)
T ss_dssp             CCTTCCGGGGGGGGHHHHCCS-CSCEEEECSSEEECSCCHHHHTCCCT-TCSEEEEECHHHHTSTT-----H---HHHTT
T ss_pred             cccccCHHHHHHHHHhhhCCc-cceEEEecCCEEEecchHHHHhcccc-cceeeeehhhhhhhhhh-----h---HHHhC
Confidence            123456789999999999995 99999999999999999999999998 66666655443211110     0   00112


Q ss_pred             cCCCCCccceeeeEEEechHHhhhchHHHHHHHHHHhccccCCCCCCccHHHHhhcCCeEecCcccccCCCCCC---cc-
Q 018567          226 FSGRNACYFNTGVMVIDLERWRKGDYTRKIVEWMELQKRMRIYELGSLPPFLLVFAGNIAPVDHRWNQHGLGGD---NY-  301 (354)
Q Consensus       226 ~~~~~~~yFNsGVmlinl~~wR~~~~~~~~~~~~~~~~~~~~~~~~DQd~LN~vf~~~i~~L~~~wN~~~~~~~---~~-  301 (354)
                      + ....+||||||||||+++||+.+++++++++++....  .+.++|||+||.+|.|++..||.+||++..++.   +. 
T Consensus       145 ~-~~~~~yfNsGVml~n~~~~r~~~~~~~~~~~~~~~~~--~~~~~DQd~LN~~f~~~~~~L~~~~N~~~~~~~~~~~~~  221 (282)
T d1ga8a_         145 M-ADGEYYFNAGVLLINLKKWRRHDIFKMSSEWVEQYKD--VMQYQDQDILNGLFKGGVCYANSRFNFMPTNYAFMANWF  221 (282)
T ss_dssp             C-CTTSCCEEEEEEEECHHHHTTSCHHHHHHHHHHHHTT--TCSSTHHHHHHHHHTTSEEEECGGGSBCHHHHHTCC---
T ss_pred             C-CCCCceeecceeeechhhhhhhhHHHHHHHHHHhccc--CcccCchhHHHHHhcCCEEeCCHHHeecccccccccccc
Confidence            2 2357999999999999999999999999999986542  235799999999999999999999998742210   00 


Q ss_pred             c-----cccc--cCCCCCCEEEeccCCCCCCCCCCCCCCCCchhccccccccC
Q 018567          302 R-----GLCR--DLHPGPVSLLHWSGKGKPWVRLDANRPCPLDALWAPYDLLQ  347 (354)
Q Consensus       302 ~-----~~~~--~l~~~~~~IiHy~g~~KPW~~~~~~~~~~~~~lW~~Y~~~~  347 (354)
                      .     ...+  .....+++||||+|+.|||+..+..   +....|++|....
T Consensus       222 ~~~~~~~~~~~~~~~~~~~~iiHf~G~~KPW~~~~~~---~~~~~~~~~~~~~  271 (282)
T d1ga8a_         222 ASRHTDPLYRDRTNTVMPVAVSHYCGPAKPWHRDCTA---WGAERFTELAGSL  271 (282)
T ss_dssp             -CSCCCHHHHHHHSCCSSCSEEECCSSCCTTSTTCCS---TTTHHHHHHHTTC
T ss_pred             ccccchhhhhhhhhccCCCEEEeeCCCCCCCCCCCCC---hhHHHHHHHHHhh
Confidence            0     0000  1112467999999999999987654   4678888877654
>d1ll2a_ c.68.1.14 (A:) Glycogenin {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Back     information, alignment and structure
>d1lzia_ c.68.1.9 (A:) Glycosyltransferase A catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1o7qa_ c.68.1.9 (A:) alpha-1,3-galactosyltransferase catalytic domain {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1xhba2 c.68.1.17 (A:95-422) Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1s4na_ c.68.1.16 (A:) Glycolipid 2-alpha-mannosyltransferase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure