Citrus Sinensis ID: 018594


Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350---
MQIFGQNPDRIVEGYSEEFEAGFLELMRRSHRFSRIAATVVYNEYIHDRHHVHMNSTRWATLTEFVKYLGRTGKCKVEETPKGWFITYIDRDSETLFKEKMKNKRIKLDMVDEERQEREIQKQIEIAASSSVSSTNPLSNSEDNTTRELNLEAAAAVGKVGFALGSSYKDNVTSNGSGNNGSSSTRLVFEELDKDNNNNNNNNRKIDKNGSKVSGNSALEELMREEEKVKEKMNRKDYWLCEGIIVKVMSKALADKGYNKQKGVVRKVIDKYVGEIEMLEKKHVLRVDQDELETVIPQIGGLVRIVNGAYRGSNARLLGVDTDKFCAQVKIEKGVYDGRVLNAIDYEDICKLA
ccccccccHHHHHHHHHHHHHHHHHHHHHcccccEEcccEEEEEcccccccccccccccccHHHHHHHHcccccEEEECccccEEEEEEcccHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHcccccccccccccccccHHHHHHHHHHHHccccccccccccccccccccccccccccccHHHHHcccccccccccccccccccccccccHHHHHHHHHHHHHHHHcccccccccccEEEEEEcccccccccccccEEEEEccccEEEEEEcccccEEEEccccccccccccccEEEEEEccccccEEEEEEECccccEEEEEEEcccccccEEEccccccccccc
*Q*****PDRIVEGYSEEFEAGFLELMRRSHRFSRIAATVVYNEYIHDRHHVHMNSTRWATLTEFVKYLGRTGKCKVEETPKGWFITYIDRDSETLF*******************************************************************************************************************************************DYWLCEGIIVKVMSKALADKGYNKQKGVVRKVIDKYVGEIEMLEKKHVLRVDQDELETVIPQIGGLVRIVNGAYRGSNARLLGVDTDKFCAQVKIEKGVYDGRVLNAIDYEDICKLA
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MQIFGQNPDRIVEGYSEEFEAGFLELMRRSHRFSRIAATVVYNEYIHDRHHVHMNSTRWATLTEFVKYLGRTGKCKVEETPKGWFITYIDRDSETLFKEKMKxxxxxxxxxxxxxxxxxxxxxIEIAASSSVSSTNPLSNSEDNTTRELNLEAAAAVGKVGFALGSSYKDNVTSNGSGNNGSSSTRLVFEELDKDNNNNNNNNRKIDKNGSKVSGxxxxxxxxxxxxxxxxxxxxxDYWLCEGIIVKVMSKALADKGYNKQKGVVRKVIDKYVGEIEMLEKKHVLRVDQDELETVIPQIGGLVRIVNGAYRGSNARLLGVDTDKFCAQVKIEKGVYDGRVLNAIDYEDICKLA

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
DNA/RNA-binding protein KIN17 Involved in DNA replication and the cellular response to DNA damage. May participate in DNA replication factories and create a bridge between DNA replication and repair mediated by high molecular weight complexes. May play a role in illegitimate recombination and regulation of gene expression. May participate in mRNA processing. Binds, in vitro, to double-stranded DNA. Also shown to bind preferentially to curved DNA in vitro and in vivo. Binds via its C-terminal domain to RNA in vitro.probableQ8K339
DNA/RNA-binding protein KIN17 Involved in DNA replication and the cellular response to DNA damage. May participate in DNA replication factories and create a bridge between DNA replication and repair mediated by high molecular weight complexes. May play a role in illegitimate recombination and regulation of gene expression. May participate in mRNA processing. Binds, in vitro, to double-stranded DNA. Also shown to bind preferentially to curved DNA in vitro and in vivo (By similarity). Binds via its C-terminal domain to RNA in vitro.probableO60870

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!


Spatial Structural Prediction

Structural Models Based on Templates

Template: 2CKK, chain A
Confidence level:very confident
Coverage over the Query: 233-353
View the alignment between query and template
View the model in PyMOL
Template: 2V1N, chain A
Confidence level:very confident
Coverage over the Query: 1-107
View the alignment between query and template
View the model in PyMOL