Citrus Sinensis ID: 018608

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350---
Protein Sequence
MFYTLSLVLYSFSSKLKASIFLNWVLFIFGVYTTKIDLRQHKVVVKGDVAAETLIGKLEKNGKHAELWPESKAEQKEKKQSKGKNKEKQQQQQQQQQQGDQESSDEGNKNPAEKETVKEPSKSKENGNGGAGTSKNVENNGAVHHVIKVNEVGGQIAKESKPDQVKQTVTFAAGGQSPVGDKKAGDSESEGGVEKSGGGGGSGGKKKKKKGHKGNNGNSNVVIGGGEPFGGVGGDAPAGAGSPMYGPHGPTHAPFPFPASYSPPRQHGYPYPQYAPPPHYYTPPVYATSYNTAHPRPGYTTSYYTAPTPNSYAYMHAGTGSEIPPSDVDSYSSQPSDSFEIFSDENPNACAIM
Secondary Structure (PSIPRED)
ccEEEEEEcccHHHHHHHHHHHHHHcccccEEEEEEcccccEEEEEEEccHHHHHHHHHHccccEEEccccHHHHHHHHHHccccHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cEEEEEEEEEcccHHHHHHHHHHHHHccccEEEEEEEccccEEEEEccccHHHHHHHHHHcccccEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHcccccccccccHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Coil and Loop (DISEMBL)
MFYTLSLVLYSFSSKLKASIFLNWVLFIFGVYttkidlrqhkvvvkGDVAAETLIGKLEkngkhaelwpeskAEQKEKKQSKGKNKEKQQQQQQQQQqgdqessdegnknpaeketvkepskskengnggagtsknvenngaVHHVIKVNEVggqiakeskpdqvKQTVTfaaggqspvgdkkagdseseggveksgggggsggkkkkkkghkgnngnsnvvigggepfggvggdapagagspmygphgpthapfpfpasyspprqhgypypqyappphyytppvyatsyntahprpgyttsyytaptpnsyaymhagtgseippsdvdsyssqpsdsfeifsdenpnacaim
Flexible Loop (DISEMBL)
MFYTLSLVLYSFSSKLKASIFLNWVLFIFGVYTTKIDLRQHKVVVKGDVAAETLIgklekngkhaelwpeskaeQKEKKQSKGKNKEKQQQQQQqqqqgdqessdegnknpaeketvkepskskengnggagtsknvennGAVHHVIKVNEVGGQIAKESKPDQVKQTVtfaaggqspvgdkkagdseseggveksgggggsggkkkkkkghkgnngnSNVVIGGGEPFGGVGGDAPAGAGSPMYGPHGPTHAPFPFPASYSPPRQHGYPYPQYAPPPHYYTPPVYATSYNTAHPRPGYTTSYYTAPTPNSYAYMHAGTGSEIPPSDVDSYSSQPSDsfeifsdenpnacaim
Low Complexity Region (SEG)
MFYTLSLVLYSFSSKLKASIFLNWVLFIFGVYTTKIDLRQHKVVVKGDVAAETLIGKLEKNGKHAELWPeskaeqkekkqskgknkekqqqqqqqqqqgdqessdeGNKNPAEKETVKEPSKSKENGNGGAGTSKNVENNGAVHHVIKVNEVGGQIAKESKPDQVKQTVTFAAGGQSPVGDKKAGDseseggveksgggggsggkkkkkkghkgnngnsnvvigggepfggvggdapagagSPMYGPHGPTHapfpfpasysppRQHGypypqyappphyytppvyATSYNTAHPRPGYTTSYYTAPTPNSYAYMHAGTGSEIPPSDVDSYSSQPSDSFEIFSDENPNACAIM
Disordered region (IsUnstruct)
*FYTLSLVLYSFSSKLKASIFLNWVLFIFGVYTTKIDLRQHKVVVKGDVAAETLIGKL************************************************************************************VHHVIKVNE*************************************************************************************************************************QYAPPPHYYTPPVYATSYNTAHPRPGYTTSYYTAPTPNSYAY***************************************
Disordered Region (DISOPRED)
MFYTLSLVLYSFSSKLKASIFLNWVLFIFGVYTTKIDLRQHKVVVKGDVAAETLIGKLEKNGKHAELWPE*****************************************************************************************************************************************************************************************************************************************************************************EIFSDENPNACAIM
Disordered Region (DISEMBL)
MFYTLSLVLYSFSSKLKASIFLNWVLFIFGVYTTKIDLRQHKVVVKGDVAAETLIGKLEKNGKHAELWP*************************************************************AGTSKNVENNGAVHHVIKVNEVGGQIAKESKPDQVKQTVTFAAGGQ**************************************NNGNSNVVIGGGEPFGGVGGDAPAGAGSPMYGPHGPTHAPFPFPASYSPPRQHGYPYPQYAPPPHYYTPPVYATSYNTAHPRPGYTTSYYTAPTPNSYAYMHAGTGSEI*************DSFEIFSDENPNACAIM
Disordered Region (DISPRO)
MFYTLSLVLYSFSSKLKASIFLNWVLFIFGVYTTKIDLRQHKVVVKGDVAAETLIGKLEKNGKHA**WP*******************************************************************************************************************************************************************************YGPHGPTHAPFPFPASYSPPRQHGYPYPQYAPPPHYYTPPVYATSYNTAHPRPGYTTSYYTAPTPNSYAYMHAGTGSEIPPSD**S*****S*SFE*F***********
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MFYTLSLVLYSFSSKLKASIFLNWVLFIFGVYTTKIDLRQHKVVVKGDVAAETLIGKLEKNGKHAELWPExxxxxxxxxxxxxxxxxxxxxxxxxxxxGDQESSDEGNKNPAEKETVKEPSKSKENGNGGAGTSKNVENNGAVHHVIKVNEVGGQIAKESKPDQVKQTVTFAAGGQSPVGDKKAGDSESEGGVEKSGGGGGSGGKKKKKKGHKGNNGNSNVVIGGGEPFGGVGGDAPAGAGSPMYGPHGPTHAPFPFPASYSPPRQHGYPYPQYAPPPHYYTPPVYATSYNTAHPRPGYTTSYYTAPTPNSYAYMHAGTGSEIPPSDVDSYSSQPSDSFEIFSDENPNACAIM
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	353
225450759	350	PREDICTED: uncharacterized protein LOC10	0.886	0.894	0.409	6e-38
147768217	350	hypothetical protein VITISV_004114 [Viti	0.886	0.894	0.409	2e-37
255542720	384	chloroplast-targeted copper chaperone, p	0.929	0.854	0.467	1e-36
224123574	306	predicted protein [Populus trichocarpa]	0.790	0.911	0.403	2e-33
356505833	352	PREDICTED: uncharacterized protein LOC10	0.830	0.832	0.377	2e-33
356533565	376	PREDICTED: uncharacterized protein LOC10	0.872	0.819	0.360	3e-29
357511925	365	Copper chaperone (CCH)-related protein-l	0.861	0.832	0.338	4e-19
224110552	281	predicted protein [Populus trichocarpa]	0.745	0.935	0.327	2e-18
357441733	402	hypothetical protein MTR_1g083310 [Medic	0.971	0.853	0.334	9e-18
297853484	355	hypothetical protein ARALYDRAFT_474782 [	0.847	0.842	0.328	2e-15

>gi|225450759|ref|XP_002279364.1| PREDICTED: uncharacterized protein LOC100247751 [Vitis vinifera]

 Score =  164 bits (415), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 150/366 (40%), Positives = 188/366 (51%), Gaps = 53/366 (14%)

Query: 3   YTLSLVLYSFSSKLKASIFLNWVLFIFGVYTTKIDLRQHKVVVKGDVAAETLIGKLEKNG 62
           + L + ++    K K    L     I GVYTT+ID RQ KV V G+V  ETL+ KL KNG
Sbjct: 23  WVLKVSIHCEGCKKKVKKILQ---NIDGVYTTEIDTRQQKVCVTGNVDVETLLKKLVKNG 79

Query: 63  KHAELWPESKAEQKEKKQSKGKNKEKQQQQQQQQ--QQGDQESSDEGNKNPAEKETVKEP 120
           KHAELWPE KA+ +++K+SK K K+K Q+  +Q+    GD+E S        + E V+EP
Sbjct: 80  KHAELWPE-KADHQKEKKSKNKEKQKDQESNEQEGGHDGDKEKST------VKFEAVQEP 132

Query: 121 SKSKENGNGGAGTSKNVENNGAVHHVIKVNEVGGQIA------KESKPDQVKQTVTFAAG 174
           +K+ E  +  A  +      G      KV E G  +       KE+KP +VK+     AG
Sbjct: 133 TKNPEPKHSEAAAASGSGGGGGGGGGAKVGENGAAVKNGAAAQKEAKP-EVKKPEASPAG 191

Query: 175 GQSPVGDKKAGDSESEGGVEKSGGGGGSGGKKKKKKGHKGNNGNSNVVIGGGEPFGGVGG 234
              P  +KK G+S+       +    G  G   KKK  KG   NS+V        G    
Sbjct: 192 EAPPAAEKKVGESD-------ACADKGGSGNGSKKKKKKGQKPNSDV--------GAPSS 236

Query: 235 DAPAG-AGSPMYGPHGPTHAPFPFPASYSPPRQHGYPYPQYAPPPHYYTP--PVYATSYN 291
           D PA   GSP   P  P+H   P PAS     Q  Y Y     PPHYY P  P Y  SYN
Sbjct: 237 DTPAAPPGSPNPSP-APSHG--PAPAS----TQTVYHY-----PPHYYAPPQPAYTVSYN 284

Query: 292 TAHPRPGYTTSYYTAPTPN-SYAYMHAGTGSEIPPSDVDSYSSQ---PSDSFEIFSDENP 347
           T HP   +  SYY  P P  SYAYMH G  +E PPSD DS  S    PSDSF+ FSDENP
Sbjct: 285 TMHPSTSHEASYYATPPPQYSYAYMHPGPWTEPPPSDFDSNPSSVHPPSDSFQFFSDENP 344

Query: 348 NACAIM 353
           NAC++M
Sbjct: 345 NACSLM 350

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147768217|emb|CAN73618.1| hypothetical protein VITISV_004114 [Vitis vinifera]

 Score =  162 bits (410), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 150/366 (40%), Positives = 188/366 (51%), Gaps = 53/366 (14%)

Query: 3   YTLSLVLYSFSSKLKASIFLNWVLFIFGVYTTKIDLRQHKVVVKGDVAAETLIGKLEKNG 62
           + L + ++    K K    L     I GVYTT+ID RQ KV V G+V  ETL+ KL KNG
Sbjct: 23  WVLKVSIHCEGCKKKVKKILQ---NIDGVYTTEIDTRQQKVCVTGNVDVETLLKKLVKNG 79

Query: 63  KHAELWPESKAEQKEKKQSKGKNKEKQQQQQQQQ--QQGDQESSDEGNKNPAEKETVKEP 120
           KHAELWPE KA+ +++K+SK K K+K Q+  +Q+    GD+E S        + E V+EP
Sbjct: 80  KHAELWPE-KADHQKEKKSKNKEKQKDQESNEQEGGHGGDKEKST------VKFEAVQEP 132

Query: 121 SKSKENGNGGAGTSKNVENNGAVHHVIKVNEVGGQIA------KESKPDQVKQTVTFAAG 174
           +K+ E  +  A  +      G      KV E G  +       KE+KP +VK+     AG
Sbjct: 133 TKNPEPKHSEAAAASGSGGGGGGGGGTKVGENGAAVKNGAAAQKEAKP-EVKKPEASPAG 191

Query: 175 GQSPVGDKKAGDSESEGGVEKSGGGGGSGGKKKKKKGHKGNNGNSNVVIGGGEPFGGVGG 234
              P  +KK G+S+       +    G  G   KKK  KG   NS+V        G    
Sbjct: 192 EAPPAAEKKVGESD-------ACADKGGSGNGSKKKKKKGQKPNSDV--------GAPSS 236

Query: 235 DAPAG-AGSPMYGPHGPTHAPFPFPASYSPPRQHGYPYPQYAPPPHYYTP--PVYATSYN 291
           D PA   GSP   P  P+H   P PAS     Q  Y Y     PPHYY P  P Y  SYN
Sbjct: 237 DTPAAPPGSPNPSP-APSHG--PAPAS----TQTVYHY-----PPHYYAPPQPAYTVSYN 284

Query: 292 TAHPRPGYTTSYYTAPTPN-SYAYMHAGTGSEIPPSDVDSYSSQ---PSDSFEIFSDENP 347
           T HP   +  SYY  P P  SYAYMH G  +E PPSD DS  S    PSDSF+ FSDENP
Sbjct: 285 TMHPSTSHGASYYATPPPQYSYAYMHPGPWTEPPPSDFDSNPSSVHPPSDSFQFFSDENP 344

Query: 348 NACAIM 353
           NAC++M
Sbjct: 345 NACSLM 350

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255542720|ref|XP_002512423.1| chloroplast-targeted copper chaperone, putative [Ricinus communis] gi|223548384|gb|EEF49875.1| chloroplast-targeted copper chaperone, putative [Ricinus communis]

 Score =  159 bits (403), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 173/370 (46%), Positives = 205/370 (55%), Gaps = 42/370 (11%)

Query: 3   YTLSLVLYSFSSKLKASIFLNWVLFIFGVYTTKIDLRQHKVVVKGDVAAETLIGKLEKNG 62
           + L + ++    K K    L     I GVY T+IDLRQ KV V G+V   TLI KL K G
Sbjct: 38  WVLKVSIHCEGCKRKVKKILT---NIDGVYATEIDLRQQKVTVIGNVDGGTLIKKLVKAG 94

Query: 63  KHAELWPESKAEQKEKKQSKGKNKEKQQQQQQQQQQGDQESSDEGNKNPAEKETVK---- 118
           KHAELWPE KA+   K++ KGK+K K + ++++ +Q DQES +EG  +  EKETVK    
Sbjct: 95  KHAELWPE-KADS--KEKKKGKSKNKNKDKKEKDKQSDQESGEEGG-DKKEKETVKTEVV 150

Query: 119 ---EPSK-SKENGNGGAGTSKNVENNGAVHHVIKVNEVGGQIA------KESKPDQVKQT 168
              +PS+ + EN N    TSK   NN    HV K  + GG         KE K  +VKQ 
Sbjct: 151 IIQDPSRVASENAN----TSK---NNTEFVHVCKPTDGGGATPKPGVQFKEVK-LEVKQP 202

Query: 169 VTFAAGGQSPVGDKKAGDSESEGGVEKSGGGGGSGGKKKKKKGHKGNNGNSNVVIGGGEP 228
           V   AG QSPV DKK G SESEG  EK+G GG SG     KK  K  +  +N        
Sbjct: 203 VNPPAGSQSPVADKK-GCSESEGNPEKNGSGGSSGSASGGKKKKKKGHKGNNNNNNNNGD 261

Query: 229 FGGVGGDAPAGAGSP---MYGPHGPTHAPFPFPASYSPPRQHGYPYPQYAPPPHYYTPPV 285
            G    DAPAG GSP        G    P P+PA++SPP     P+P Y  PPHYY PP 
Sbjct: 262 EGEHSCDAPAGIGSPSHGHGPGQGHGQGPAPYPANHSPP-----PHPMYQYPPHYYAPPP 316

Query: 286 YAT-SYNTAHPRPGYTTSYYTAPTPNSYAYMHAGT-GSEIPPSDVDSYSSQPSDSFEIFS 343
             T SYN       Y  S Y  P  +SY YMH G   SE PPSD DSY SQPSDSFEIFS
Sbjct: 317 VYTVSYNAMQSSASYGASVY--PPSSSYVYMHPGMAASEPPPSDSDSYPSQPSDSFEIFS 374

Query: 344 DENPNACAIM 353
           DENPNAC+IM
Sbjct: 375 DENPNACSIM 384

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224123574|ref|XP_002330155.1| predicted protein [Populus trichocarpa] gi|222871611|gb|EEF08742.1| predicted protein [Populus trichocarpa]

 Score =  149 bits (377), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 142/352 (40%), Positives = 173/352 (49%), Gaps = 73/352 (20%)

Query: 4   TLSLVLYSFSSKLKASIFLNWVLFIFGVYTTKIDLRQHKVVVKGDVAAETLIGKL-EKNG 62
            L + ++    K K    LN    I GVYTT +DLRQ K  V G+V A+TLI KL +K G
Sbjct: 26  VLKVSVHCEECKRKVKKILN---NIDGVYTTDVDLRQQKATVIGNVDADTLIKKLIKKTG 82

Query: 63  KHAELWPESKAEQKEKKQSKGKNKEKQQQQQQQQQQGDQESSDEGNKNPAEKETVKEPSK 122
           KHAELWPE KA+  +K + K    +K+++++ ++++ DQESSDE                
Sbjct: 83  KHAELWPE-KADNNQKDKKK-GKGKKKEKEKGKEKESDQESSDE---------------- 124

Query: 123 SKENGNGGAGTSKNVENNGAVHHVIKVNEVGGQIAKESKPDQVKQTVTFAAGGQSPVGDK 182
             E  +GG                    EV G+        +  QT T   GGQSPV DK
Sbjct: 125 --EGSDGG-----------------NEKEVKGKT-------EGCQTGTSPGGGQSPVTDK 158

Query: 183 KA-GDSESEGGVEKSGGGGGSGGKKKKKKGHKGNNGNSNVVIGGGEPFGGVGGDAPAGAG 241
           K  G SE   G    GG      KKKKK    GNN   +      E    V   APAG G
Sbjct: 159 KVDGQSEVGAGGSAGGGKKKKKKKKKKKAHTAGNNNPVD------EAEHSV--RAPAGTG 210

Query: 242 SPMYGPHGPTHAPFPFPASYSPPRQHGYPYPQYAPPPHYYTPPVYATSYNTAHPRPGYTT 301
           SP  G     H     P ++SP RQH Y YP       YY P VYA S + A P   Y  
Sbjct: 211 SPTLGN---VHVQIAHPTNHSPQRQHVYDYPATT----YYAPTVYAVSSHVACPSTFYGA 263

Query: 302 SYYTAPTPNSYAYMHAGTGSEIPPSDVDSYSSQPSDSFEIFSDENPNACAIM 353
           SYY+ P   SYA MH       PPSD+D+Y  QPS SFEIFSDENPNAC+IM
Sbjct: 264 SYYSPPY--SYACMH-------PPSDLDTYPPQPSGSFEIFSDENPNACSIM 306

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356505833|ref|XP_003521694.1| PREDICTED: uncharacterized protein LOC100810882 [Glycine max]

 Score =  149 bits (375), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 143/379 (37%), Positives = 190/379 (50%), Gaps = 86/379 (22%)

Query: 9   LYSFSSKLKASIFLN--------WVLFIFGVYTTKIDLRQHKVVVKGDVAAETLIGKLEK 60
           L   S  LK SI            +  I GVY T IDLRQ KV+VKG+V ++TLI KL +
Sbjct: 26  LMCKSCVLKVSIHCQGCTRKVKKILQSIDGVYCTSIDLRQQKVIVKGNVDSDTLIKKLTE 85

Query: 61  NGKHAELWPE-------SKAEQKEKKQSKGKNKEK---QQQQQQQQQQGDQESSDEGNKN 110
            GK AELWP+        K ++K+KK++  +NKEK   Q+  ++  Q GD    D  N+ 
Sbjct: 86  TGKRAELWPDQPELKKKKKKKKKKKKKANPENKEKPSEQESSEESNQSGD----DNNNEK 141

Query: 111 PAEKETVKEPSKSKENGNGGAGTSKNVENNGAVHHVIKVNEVGGQ----IAKESKPDQVK 166
            A K  V++P+K                NN    +V +V E        +  +    +V+
Sbjct: 142 EAIKVVVQDPAK----------------NNEGFFNVNRVGEGSATGLTGVQFQDPRMEVR 185

Query: 167 QTVTFAAGGQSPVGDKKAGDSESEGGVEKSGGGGGSGGKKKKKKGHKGNNGNSNVVIGGG 226
           QTV    G QS V  +K       G ++++   GGSGGK+ K KG KG     NVVI GG
Sbjct: 186 QTVMVPPGYQSSVMGEKRVTINVPGMMDEN--EGGSGGKRTKSKGQKG-----NVVINGG 238

Query: 227 -------EPFGGVGGDAPAGAGSPMYGPHGPTHAPFPFPASYSPPRQHGYPYPQYAPPPH 279
                  E  GG     P G G      HGP +         SPPR H Y       PPH
Sbjct: 239 NEGVTVVEHAGGDWNQMPGGHG------HGPPNE--------SPPR-HQY-------PPH 276

Query: 280 YYTP--PVYATSYNTAHPR-PGYTTSYYTAPTPNSYAYMHAGTGSEIPPSDVDSYS--SQ 334
           Y+ P  PVY  +Y+TA+P    Y  +YYT+P P SY++++   GSE   SD ++Y+  S 
Sbjct: 277 YHAPASPVYTGTYHTAYPTVTRYGAAYYTSPQPYSYSHVYRCVGSE---SDSETYTSPSP 333

Query: 335 PSDSFEIFSDENPNACAIM 353
           PS SFE+FSDENPNAC IM
Sbjct: 334 PSCSFELFSDENPNACFIM 352

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356533565|ref|XP_003535333.1| PREDICTED: uncharacterized protein LOC100811398 [Glycine max]

 Score =  135 bits (340), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 138/383 (36%), Positives = 180/383 (46%), Gaps = 75/383 (19%)

Query: 4   TLSLVLYSFSSKLKASIFLNWVLFIFGVYTTKIDLRQHKVVVKGDVAAETLIGKLEKNGK 63
            L + ++    K K    L     + GV+T  IDLRQHKVVV G+V +ETLI KL K GK
Sbjct: 36  VLRVSIHCQGCKRKVQKILQ---AVHGVHTIDIDLRQHKVVVTGNVNSETLIWKLTKAGK 92

Query: 64  HAELWPESKAEQKEKKQSKGKNKEKQQQQQQQQQQGDQESSDEGNKNPAEKETVKEPSKS 123
           HAELWP+ KA+ K+KKQ K ++ +   Q  +Q      + ++     P E          
Sbjct: 93  HAELWPQLKADSKKKKQPKPESSQGINQTDKQAVNVVAQGTNANVSKPGE---------- 142

Query: 124 KENGNGGAGTSKNVENNGAVHHVIKVNEVGGQIAKESKPDQVKQTVTFAAGGQSPVGDKK 183
                 G  T K                 G QI +E KP+ ++QTV     G  PV +K 
Sbjct: 143 ------GCATGK----------------AGVQI-QEPKPEVIRQTVVLPPAG--PVTEKV 177

Query: 184 A------GDSESEGG-----VEKSGGGGGSGGKKKKKKGHKGNNGN-----SNVVIGGGE 227
           +       D+E+ G          GG G    KK   KG   NN N     + V +   +
Sbjct: 178 SIAVQVPNDNEATGNENITGGTGGGGAGKKKKKKASVKGSTNNNANEGAGAATVTVEHAK 237

Query: 228 PFGGVG---GDAPAGAGSPMYGPHGPTHAPFPFPASYSPPRQHGYPYPQYAPPPHYYTPP 284
              G G   G+   G G      HG +  PF  PA+ SPPR H   Y QY P  +   PP
Sbjct: 238 ANDGSGPSSGNQSHGQGHVHV--HG-SWLPFSSPANESPPRHHNI-YRQYPPHYYAPPPP 293

Query: 285 VY---------ATSYNTAHPRPGYTTSYYTAPTPNSYAY-MHAGTGSEIPPS---DVDSY 331
                        SY+TAHP   Y T+YYT+P P SYA+ +  G   E PP    + +SY
Sbjct: 294 PPPPTTPAVHTVMSYHTAHPSSSYGTAYYTSPQPYSYAHVVRPGNEMEPPPPYTYERESY 353

Query: 332 -SSQPSDSFEIFSDENPNACAIM 353
            SSQPSDSFE+FSDENPNAC++M
Sbjct: 354 ASSQPSDSFELFSDENPNACSVM 376

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357511925|ref|XP_003626251.1| Copper chaperone (CCH)-related protein-like protein [Medicago truncatula] gi|124360014|gb|ABN08030.1| Heavy metal transport/detoxification protein [Medicago truncatula] gi|355501266|gb|AES82469.1| Copper chaperone (CCH)-related protein-like protein [Medicago truncatula]

 Score =  102 bits (253), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 125/369 (33%), Positives = 174/369 (47%), Gaps = 65/369 (17%)

Query: 13  SSKLKASIFLNWVLF--------IFGVYTTKIDLRQHKVVVKGDVAAETLIGKLEKNGKH 64
           S  L+ SI     +         I GVY T IDL+Q KV VKG V  +TLI  L + GK 
Sbjct: 34  SCTLRVSIHCQGCMRKVKKVLQSIDGVYQTTIDLKQQKVEVKGTVDTDTLIKILTQTGKR 93

Query: 65  AELWPESK-AEQKEKKQSKGKNKEKQQQQQQQQQQGDQESSDEGNKNPA--EKETVKEPS 121
           AELWP+++  ++K+KK+ K K  + +  Q   Q+Q D ESSDEGN+     E E VK   
Sbjct: 94  AELWPDTEPIKKKKKKKKKKKKPKPENGQNTDQKQSDGESSDEGNQTDGGNENEAVKVVV 153

Query: 122 KSKENGNGGAGTSKNVENNGAVHHVIKVNEVGGQIAKESKPDQVKQTVTFAAGGQSPVGD 181
            + E G+GG                ++  E+        KP+ V+   +F AG Q PV +
Sbjct: 154 AATEGGSGGGWPPGRGG--------VQFQEI--------KPE-VRHVTSFPAGNQLPVAE 196

Query: 182 KKAGDSESEGGVEKSGGGGGSGGKKKKKKGHKGNNGNSNVVIGGGEPFGGVGGDAPAGAG 241
           KK   +    G+         GG ++ +  ++G  GNS  +    EP    GGD      
Sbjct: 197 KKVTMAMENAGL-------NDGGYRRNRIYYQGQRGNSEGLNVTFEPPPS-GGD---WNQ 245

Query: 242 SPMYGPHGPTHAPFPFPASYS-PPRQHGYPYPQYAPPPHYY----TPPVYATSY-NTAHP 295
           + M+G         P   S+  PP     P  QYA  PHY+    +P V   +Y +TA+P
Sbjct: 246 NQMHGHGPCGPGSGPGQVSFMGPPPNESPPRNQYA--PHYHHAPASPTVCGGNYLHTAYP 303

Query: 296 RP-GYTTSYYTAPT-PNSYAYMHAGTGSEIPPSDVD---------SYSSQPSDSFEIFSD 344
               Y  SY T+ + P SYAY H         +D D         S  S+ S+SFE+FSD
Sbjct: 304 TSMRYGASYCTSLSQPYSYAYTHQS-------NDFDESESYTYTTSSRSRTSNSFELFSD 356

Query: 345 ENPNACAIM 353
           ENPNAC++M
Sbjct: 357 ENPNACSVM 365

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224110552|ref|XP_002315555.1| predicted protein [Populus trichocarpa] gi|222864595|gb|EEF01726.1| predicted protein [Populus trichocarpa]

 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 115/351 (32%), Positives = 147/351 (41%), Gaps = 88/351 (25%)

Query: 3   YTLSLVLYSFSSKLKASIFLNWVLFIFGVYTTKIDLRQHKVVVKGDVAAETLIGKLEKNG 62
           + L + ++    K K    L     I GV+TT ID +Q +V V G++ A TLI KL K G
Sbjct: 19  WVLKVSIHCQGCKRKVRKVLQ---SIDGVFTTSIDSQQQRVTVTGNIEAGTLIKKLMKTG 75

Query: 63  KHAELWPESKAEQKEKKQSKGKNKEKQQQQQQQQQQGDQESSDEGNKNPAEKETVKEPSK 122
           KHAE+WPE K   KEK+  K K+            + DQ  +D G+K             
Sbjct: 76  KHAEIWPE-KVATKEKESGKAKS---------MHSKNDQNQNDSGSKKSVR--------- 116

Query: 123 SKENGNGGAGTSKNVENNGAVHHVIKVNEVGGQIAKESKPDQVKQTVTFAAGGQSPVGDK 182
                                     V  +G +  K  KP +        AG + P G+ 
Sbjct: 117 ------------------------FSVEGLGEETKKGKKPPE-----NSTAGEELPGGNN 147

Query: 183 KAGDSESEGGVEKSGGGGGSGGKKKKKKGHKGNNGNSNVVIGGGEPFGGVGGDAPAGAGS 242
           K    E        GGG  S  KKKKKKG KGN+G SNV  G G P  G        AGS
Sbjct: 148 KGSIPE--------GGGADSACKKKKKKGQKGNDG-SNVTGGSGLPSSG------TSAGS 192

Query: 243 PMYGPHGPTHAPFPFPASYSPPRQHGYPYPQYAPPPHYYTPPVYATSYNTAHPRPGYTTS 302
             Y  HG        P+  +P RQH  P+P       Y  P VYA+S   A+P       
Sbjct: 193 E-YQTHGVGMNQVMGPSDLNPTRQHSIPWPL-----GYSGPQVYASSCYMAYP------- 239

Query: 303 YYTAPTPNSYAYMHAGTGSEIPPSDVDSYSSQPSDSFEIFSDENPNACAIM 353
            Y +PTP +Y   H       P    ++  +   DSF IFSDEN N C+IM
Sbjct: 240 -YGSPTPFNY---HVA-----PAPYTNANQTTQVDSFNIFSDENVNGCSIM 281

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357441733|ref|XP_003591144.1| hypothetical protein MTR_1g083310 [Medicago truncatula] gi|355480192|gb|AES61395.1| hypothetical protein MTR_1g083310 [Medicago truncatula]

 Score = 97.4 bits (241), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 131/392 (33%), Positives = 180/392 (45%), Gaps = 49/392 (12%)

Query: 4   TLSLVLYSFSSKLKASIFLNWVLFIFGVYTTKIDLRQHKVVVKGDVAAETLIGKL-EKNG 62
            L + ++    K K    L     I GV    IDLRQ KV+V G+V ++ LI KL  K G
Sbjct: 18  VLKVSIHCVGCKRKVHKILQA---IQGVQDINIDLRQQKVIVTGNVNSDILIHKLASKTG 74

Query: 63  KHAELWPESKAEQKEKKQSKGKNKEKQQQ-QQQQQQQGDQESSDEGNKNPAEKETVKEPS 121
           KH ELWPE    +K+K+    KNKEKQ   + +  ++ + + + E N N   K      +
Sbjct: 75  KHVELWPEPTESKKKKQPKPEKNKEKQSDPESENSEEIEIKHNSENNNNGTGKVDTSTST 134

Query: 122 KSKENGNGGAGTSKNVENNGAVHHVIK-----------VNEVGGQIAKESKPDQVKQTVT 170
            + +N      T+K+   +G V+  +              + G    +E KP+  KQTV 
Sbjct: 135 STSKNVEVNGNTAKSGNGSGDVNVNVNGKVNKPSEGSATGKTGVVHVQELKPEVRKQTVV 194

Query: 171 FAAGGQSPVGDKKAG--------DSESEGGVEKSG--GGGGSGGKKKKKKGHKGNNGNSN 220
             A    PV +KK          D+E     EK+G  GG  +G KKKKKK  KG   ++N
Sbjct: 195 LPA---KPVAEKKVSVAVQFPNDDNEEPLTNEKTGSTGGDSTGVKKKKKKKGKGKVVDNN 251

Query: 221 VVIGGGEPFGGVGGDAPAGAGSPM---YGPHGPTHAPFPFPASYSPPRQHGYPYPQYAPP 277
           V   G  P  G  G+   G G          G  H+          P +H Y   Q+ PP
Sbjct: 252 VEHFGDAPGTGDSGNRSHGRGYSQGQSSNFLGQVHSGSNLTNENEIPPRH-YINEQFYPP 310

Query: 278 PHYYTPP---------VYATSYNTAHP-RPGYTTSYYTAPTPNSYAY-MHAGTGSEIPPS 326
             YY  P         V   S++TA+P    Y  +YY  P P  YA+ M+ G   E+ P 
Sbjct: 311 QQYYGTPRSHVVAAPPVVTVSHHTAYPSSSSYGAAYYAPPQPYQYAHVMNTGNEMELQPR 370

Query: 327 ----DVDSY-SSQPSDSFEIFSDENPNACAIM 353
               +++SY SSQPSDSF  FSDENPNAC +M
Sbjct: 371 PYTYELESYTSSQPSDSFVYFSDENPNACNVM 402

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297853484|ref|XP_002894623.1| hypothetical protein ARALYDRAFT_474782 [Arabidopsis lyrata subsp. lyrata] gi|297340465|gb|EFH70882.1| hypothetical protein ARALYDRAFT_474782 [Arabidopsis lyrata subsp. lyrata]

 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 123/374 (32%), Positives = 163/374 (43%), Gaps = 75/374 (20%)

Query: 7   LVLYSFSSKLKASIFLN--------WVLFIFGVYTTKIDLRQHKVVVKGDVAAETLIGKL 58
           L L   S  LK SI            +  I GVY   ID++QHKV V G V+ E L+ KL
Sbjct: 30  LPLPYKSCSLKVSIHCEGCKKKVKKILTSIEGVYKVDIDVKQHKVTVIGIVSPEILLKKL 89

Query: 59  EKNGKHAELWPESKAEQKEKKQSKGKNKEKQQQQQQQQQQGDQESSDEGNKNPAEKETVK 118
            K GK+AEL PE     + K+++    ++ ++++ ++  Q  +E++  G   P + E  K
Sbjct: 90  HKAGKNAELLPEIPDPVENKQKTVDPKEKNKKKKNEENVQRTEEATSAGTDKPEKTEVGK 149

Query: 119 EPSKSKENGNGGAGTSKNVENNGAVHHVIKVNEVGGQIAKESKPDQVK-QTVTFAAGGQS 177
                 E  + G   S      G    V  V E    + KE   D VK ++ +  A   +
Sbjct: 150 SDKPESEKTDAGECCS------GDGCEVAPVKE-KKDVLKEK--DSVKEESPSPPADSAA 200

Query: 178 PVGDKKAGDSESEGGVEKSGGGGGSGGKKKKKKGHKGNNGNSNVVIGGGEPFGGVGGDAP 237
           PV +KKA         E++GGGG     KKKKK  +  N  +N                 
Sbjct: 201 PVAEKKA---------EETGGGGNGKVGKKKKKKGQNLNTTNN----------------- 234

Query: 238 AGAGSPMYGPHGPTHAPFPFPASY----------------SPPRQHGYPYPQYAPPPHYY 281
                P  GP      P P    Y                +PPR   YPYP       YY
Sbjct: 235 -----PTDGPARTQSLPLPTTTDYDRPFNQINDHHIITNNNPPRHDMYPYPAAG----YY 285

Query: 282 TPPV-YATSYNTAHPRPGY-TTSYYTAPTPNSYAYMHAGTGSEIPPSDVDSYSSQPSDSF 339
            P V Y  SYN A P       SYYT P P SYAYMH G      PSD + Y  +PSDSF
Sbjct: 286 APQVMYGVSYNVAQPPVSVDAASYYTPPPPYSYAYMHNGYQ----PSDQNPYQPRPSDSF 341

Query: 340 EIFSDENPNACAIM 353
           E+FSDENPN C+++
Sbjct: 342 ELFSDENPNGCSVI 355

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	353
TAIR|locus:2180265	352	AT5G27690 [Arabidopsis thalian	0.184	0.184	0.527	4.5e-26
TAIR|locus:2011841	364	AT1G56210 [Arabidopsis thalian	0.172	0.167	0.575	4.7e-24
TAIR|locus:2082425	473	AT3G06130 [Arabidopsis thalian	0.116	0.086	0.609	1.2e-07
TAIR|locus:2096204	577	AT3G05220 [Arabidopsis thalian	0.113	0.069	0.475	2.6e-06
TAIR|locus:2179604	587	AT5G19090 [Arabidopsis thalian	0.116	0.069	0.585	3.6e-06
TAIR|locus:2017709	358	AT1G23000 "AT1G23000" [Arabido	0.116	0.114	0.560	4.2e-06
TAIR|locus:2026336	152	HIPP20 "heavy metal associated	0.133	0.309	0.361	4.2e-06
TAIR|locus:2135277	158	AT4G39700 [Arabidopsis thalian	0.113	0.253	0.425	1.3e-05
TAIR|locus:2202265	159	AT1G06330 "AT1G06330" [Arabido	0.110	0.245	0.410	2.4e-05
TAIR|locus:2017759	152	HIPP22 "heavy metal associated	0.133	0.309	0.354	7.9e-05

TAIR|locus:2180265 AT5G27690 [Arabidopsis thaliana (taxid:3702)]

 Score = 162 (62.1 bits), Expect = 4.5e-26, Sum P(3) = 4.5e-26
 Identities = 38/72 (52%), Positives = 45/72 (62%)

Query:   289 SYNTAH-P--RPGY-TTSYYTAPT--PNSY-AYMHAGTGSEIPPSDVDSYSSQPSDSFEI 341
             SYNT H P    G  T SYYTAP   P SY +Y +  TG E PP +  SY SQPS+SFE 
Sbjct:   281 SYNTVHGPINNGGNETASYYTAPPSHPTSYYSYEYVDTGYESPPPEFYSYRSQPSESFES 340

Query:   342 FSDENPNACAIM 353
              S+ NPN+C +M
Sbjct:   341 LSEGNPNSCCVM 352

GO:0005634 "nucleus" evidence=ISM

GO:0030001 "metal ion transport" evidence=IEA;ISS

GO:0046872 "metal ion binding" evidence=IEA;ISS

TAIR|locus:2011841 AT1G56210 [Arabidopsis thaliana (taxid:3702)]

 Score = 178 (67.7 bits), Expect = 4.7e-24, Sum P(3) = 4.7e-24
 Identities = 38/66 (57%), Positives = 41/66 (62%)

Query:   289 SYNTAHPRPGY-TTSYYTAPTPNSYAYMHAGTGSEIPPSDVDSYSSQPSDSFEIFSDENP 347
             SYN A P       SYYT P P SYAYMH G      PSD +    +PSDSFE+FSDENP
Sbjct:   303 SYNVAQPPVSVDAASYYTPPPPYSYAYMHNG----YQPSDQNPCQPRPSDSFELFSDENP 358

Query:   348 NACAIM 353
             N CAIM
Sbjct:   359 NGCAIM 364

GO:0005634 "nucleus" evidence=ISM

GO:0030001 "metal ion transport" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA;ISS

GO:0016571 "histone methylation" evidence=RCA

TAIR|locus:2082425 AT3G06130 [Arabidopsis thaliana (taxid:3702)]

 Score = 121 (47.7 bits), Expect = 1.2e-07, Sum P(3) = 1.2e-07
 Identities = 25/41 (60%), Positives = 28/41 (68%)

Query:    28 IFGVYTTKIDLRQHKVVVKGDVAAETLIGKLEKNGKHAELW 68
             I GV+TTKID  Q KV V G V    LI KL K+GKHAE+W
Sbjct:    34 IEGVFTTKIDSEQGKVTVSGSVDPSVLIKKLAKSGKHAEIW 74

GO:0005737 "cytoplasm" evidence=ISM

GO:0030001 "metal ion transport" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

GO:0005618 "cell wall" evidence=IDA

TAIR|locus:2096204 AT3G05220 [Arabidopsis thaliana (taxid:3702)]

 Score = 97 (39.2 bits), Expect = 2.6e-06, Sum P(3) = 2.6e-06
 Identities = 19/40 (47%), Positives = 27/40 (67%)

Query:    28 IFGVYTTKIDLRQHKVVVKGDVAAETLIGKLEKNGKHAEL 67
             I GVY+ K D+ Q +V V G++    L+ KL K+GKHAE+
Sbjct:    34 IEGVYSVKADVEQGRVTVTGNIDPALLVKKLSKSGKHAEI 73

GO:0030001 "metal ion transport" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

GO:0009506 "plasmodesma" evidence=IDA

TAIR|locus:2179604 AT5G19090 [Arabidopsis thaliana (taxid:3702)]

 Score = 114 (45.2 bits), Expect = 3.6e-06, Sum P(3) = 3.6e-06
 Identities = 24/41 (58%), Positives = 28/41 (68%)

Query:    28 IFGVYTTKIDLRQHKVVVKGDVAAETLIGKLEKNGKHAELW 68
             I GV+TTKID    KV V G+V    LI KL K+GKHAE+W
Sbjct:    34 IEGVFTTKIDAELGKVTVSGNVDPSVLIKKLLKSGKHAEIW 74

GO:0005576 "extracellular region" evidence=ISM

GO:0005634 "nucleus" evidence=ISM

GO:0030001 "metal ion transport" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

GO:0009506 "plasmodesma" evidence=IDA

TAIR|locus:2017709 AT1G23000 "AT1G23000" [Arabidopsis thaliana (taxid:3702)]

 Score = 104 (41.7 bits), Expect = 4.2e-06, Sum P(3) = 4.2e-06
 Identities = 23/41 (56%), Positives = 25/41 (60%)

Query:    28 IFGVYTTKIDLRQHKVVVKGDVAAETLIGKLEKNGKHAELW 68
             I GV   KI+    KV V G V + TLI KL K GKHAELW
Sbjct:    37 IEGVCHVKIEAEHQKVTVSGSVDSATLINKLVKAGKHAELW 77

GO:0005575 "cellular_component" evidence=ND

GO:0030001 "metal ion transport" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA;ISS

GO:0009909 "regulation of flower development" evidence=RCA

GO:0016570 "histone modification" evidence=RCA

GO:0048449 "floral organ formation" evidence=RCA

TAIR|locus:2026336 HIPP20 "heavy metal associated isoprenylated plant protein 20" [Arabidopsis thaliana (taxid:3702)]

 Score = 89 (36.4 bits), Expect = 4.2e-06, Sum P(2) = 4.2e-06
 Identities = 17/47 (36%), Positives = 30/47 (63%)

Query:    23 NWVLFIFGVYTTKIDLRQHKVVVKGDVAAETLIGKLEKNGKHAELWP 69
             N V  + GV + +++ + HKV V G V  + ++ ++E+ GK AE+WP
Sbjct:    47 NAVSSMKGVKSVEVNRKIHKVTVSGYVEPKKVLKRIERTGKKAEIWP 93

GO:0005634 "nucleus" evidence=ISM

GO:0030001 "metal ion transport" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA;ISS

TAIR|locus:2135277 AT4G39700 [Arabidopsis thaliana (taxid:3702)]

 Score = 85 (35.0 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
 Identities = 17/40 (42%), Positives = 24/40 (60%)

Query:    30 GVYTTKIDLRQHKVVVKGDVAAETLIGKLEKNGKHAELWP 69
             GV T +I+ +Q KV V G   A  ++ K +  GK AE+WP
Sbjct:    58 GVKTVEINKKQQKVTVSGYADASKVLKKAKATGKKAEIWP 97

GO:0005737 "cytoplasm" evidence=ISM

GO:0030001 "metal ion transport" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA;ISS

TAIR|locus:2202265 AT1G06330 "AT1G06330" [Arabidopsis thaliana (taxid:3702)]

 Score = 78 (32.5 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
 Identities = 16/39 (41%), Positives = 23/39 (58%)

Query:    30 GVYTTKIDLRQHKVVVKGDVAAETLIGKLEKNGKHAELW 68
             GV   +ID+ Q KV V G    + ++ K+ K G+ AELW
Sbjct:    37 GVDAVEIDMVQQKVTVTGYADQKKVLKKVRKTGRRAELW 75

GO:0005507 "copper ion binding" evidence=ISS

GO:0005737 "cytoplasm" evidence=ISM

GO:0006825 "copper ion transport" evidence=ISS

GO:0030001 "metal ion transport" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

TAIR|locus:2017759 HIPP22 "heavy metal associated isoprenylated plant protein 22" [Arabidopsis thaliana (taxid:3702)]

 Score = 74 (31.1 bits), Expect = 7.9e-05, Sum P(2) = 7.9e-05
 Identities = 17/48 (35%), Positives = 27/48 (56%)

Query:    23 NWVLFIFGVYTTKIDLRQHKVVVKGDVAAETLIGKLEKNGKH-AELWP 69
             N V  I G  + +++ + HKV V G V  + ++  ++  GK  AELWP
Sbjct:    48 NAVSSIKGAKSVEVNRKMHKVTVSGYVDPKKVLKTVQSTGKKKAELWP 95

GO:0005737 "cytoplasm" evidence=ISM

GO:0030001 "metal ion transport" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA;ISS

GO:0016036 "cellular response to phosphate starvation" evidence=RCA

GO:0019375 "galactolipid biosynthetic process" evidence=RCA

GO:0045892 "negative regulation of transcription, DNA-dependent" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00022701001 SubName- Full=Chromosome chr14 scaffold_27, whole genome shotgun sequence; (350 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	353
PRK05306	746	PRK05306, infB, translation initiation factor IF-2	0.001
TIGR00927	1096	TIGR00927, 2A1904, K+-dependent Na+/Ca+ exchanger	0.003
cd00371	63	cd00371, HMA, Heavy-metal-associated domain (HMA)	0.004

>gnl|CDD|235401 PRK05306, infB, translation initiation factor IF-2; Validated

 Score = 40.2 bits (95), Expect = 0.001
 Identities = 28/182 (15%), Positives = 59/182 (32%), Gaps = 19/182 (10%)

Query: 49  VAAETLIGKLEKNG----KHAELWPESKAEQKEKKQSKGKNKEKQQQQQQQQQQGDQESS 104
           V+++ L+ KL++ G     H+    E +A ++E K+   +  + + ++    +  ++  +
Sbjct: 15  VSSKELLEKLKELGIEVKSHSSTVEEEEARKEEAKREAEEEAKAEAEEAAAAEAEEEAKA 74

Query: 105 DEGNKNPAEKETVKEPSKSKENGNGGAGTSKNVENNGAVHHVIKVNEVGGQIAKESKPDQ 164
           +     PAE+      +            ++  E                   +      
Sbjct: 75  EAAAAAPAEEAAEAAAAAEAAARPAEDEAARPAEAAAR---------------RPKAKKA 119

Query: 165 VKQTVTFAAGGQSPVGDKKAGDSESEGGVEKSGGGGGSGGKKKKKKGHKGNNGNSNVVIG 224
            K+        + P      G    +GG  +    G    +KKKKK          VVI 
Sbjct: 120 AKKKKGPKPKKKKPKRKAARGGKRGKGGKGRRRRRGRRRRRKKKKKQKPTEKIPREVVIP 179

Query: 225 GG 226
             
Sbjct: 180 ET 181

Length = 746

>gnl|CDD|233191 TIGR00927, 2A1904, K+-dependent Na+/Ca+ exchanger

 Score = 39.2 bits (91), Expect = 0.003
 Identities = 39/174 (22%), Positives = 63/174 (36%), Gaps = 17/174 (9%)

Query: 46  KGDVAAETLI--------GKLEKNGKHAELWPESKAEQKEKKQSKGKNKEKQQQQQQQQQ 97
           KG+   E  I        G+ E      E   E++  + E +   G+  E+ + + + + 
Sbjct: 690 KGEQEGEGEIEAKEADHKGETEAEEVEHEGETEAEGTEDEGEIETGEEGEEVEDEGEGEA 749

Query: 98  QGDQESSDEGNKNPAEKETVKEPSKSKENGNGGAGTSKNVENNGAVHHVIKVNEVGGQIA 157
           +G  E   EG++   E E   E    ++   G     ++ E  G      KV   G   A
Sbjct: 750 EGKHEVETEGDRKETEHEGETEAEGKEDEDEGEIQAGEDGEMKGDEGAEGKVEHEGETEA 809

Query: 158 KE-------SKPDQVKQTVTFAAGGQSPVGDKKAGDSESEGGVEKSGGGGGSGG 204
            E       S+       V    G Q    + +    + E GV+  GGGG  GG
Sbjct: 810 GEKDEHEGQSETQADDTEVKDETGEQELNAENQGEAKQDEKGVD--GGGGSDGG 861

[Transport and binding proteins, Cations and iron carrying compounds]. Length = 1096

>gnl|CDD|238219 cd00371, HMA, Heavy-metal-associated domain (HMA) is a conserved domain of approximately 30 amino acid residues found in a number of proteins that transport or detoxify heavy metals, for example, the CPx-type heavy metal ATPases and copper chaperones

 Score = 35.3 bits (82), Expect = 0.004
 Identities = 12/39 (30%), Positives = 18/39 (46%), Gaps = 2/39 (5%)

Query: 30 GVYTTKIDLRQHKVVVKGDVA--AETLIGKLEKNGKHAE 66
          GV + ++DL   K  V+ D     E L+  +E  G  A 
Sbjct: 25 GVESVEVDLETGKATVEYDPEVSPEELLEAIEDAGYKAR 63

HMA domain contains two cysteine residues that are important in binding and transfer of metal ions, such as copper, cadmium, cobalt and zinc. In the case of copper, stoichiometry of binding is one Cu+ ion per binding domain. Repeats of the HMA domain in copper chaperone has been associated with Menkes/Wilson disease due to binding of multiple copper ions. Length = 63

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	353
KOG1603	73	consensus Copper chaperone [Inorganic ion transpor	99.46
PF00403	62	HMA: Heavy-metal-associated domain; InterPro: IPR0	99.31
COG2608	71	CopZ Copper chaperone [Inorganic ion transport and	99.22
KOG4656	247	consensus Copper chaperone for superoxide dismutas	99.1
PLN02957	238	copper, zinc superoxide dismutase	98.27
PRK10671	834	copA copper exporting ATPase; Provisional	98.25
TIGR00003	68	copper ion binding protein. This model describes a	97.62
COG2217	713	ZntA Cation transport ATPase [Inorganic ion transp	97.12
PRK10671	834	copA copper exporting ATPase; Provisional	96.75
KOG0207	951	consensus Cation transport ATPase [Inorganic ion t	96.66
KOG0207	951	consensus Cation transport ATPase [Inorganic ion t	95.45
PRK11033	741	zntA zinc/cadmium/mercury/lead-transporting ATPase	95.44
TIGR02052	92	MerP mercuric transport protein periplasmic compon	94.29
cd00371	63	HMA Heavy-metal-associated domain (HMA) is a conse	92.77
COG1888	97	Uncharacterized protein conserved in archaea [Func	89.99
PF02680	95	DUF211: Uncharacterized ArCR, COG1888; InterPro: I	86.45
PRK13748	561	putative mercuric reductase; Provisional	86.37

>KOG1603 consensus Copper chaperone [Inorganic ion transport and metabolism]

Probab=99.46  E-value=2.2e-13  Score=106.19  Aligned_cols=67  Identities=33%  Similarity=0.440  Sum_probs=60.8

Q ss_pred             CeEEEEEeeecCCchhHHHHHHHhHcCCCCeeEEEEeCCCCEEEEEecCCHHHHHHHHHHcC-CceEECCC
Q 018608            1 MFYTLSLVLYSFSSKLKASIFLNWVLFIFGVYTTKIDLRQHKVVVKGDVAAETLIGKLEKNG-KHAELWPE   70 (353)
Q Consensus         1 ~~~vl~V~L~CmsC~~CA~kVkKaLskIeGVesVeVDLe~qkVTVtG~VDp~~LlkaIkKtG-K~AeL~~~   70 (353)
                      +..+++|.|||..|   +.+|++.|+.++||++|++|+.+++|||.|++|+..|+++|++++ +++++|..
T Consensus         5 ~~~v~kv~~~C~gc---~~kV~~~l~~~~GV~~v~id~~~~kvtV~g~~~p~~vl~~l~k~~~k~~~~~~~   72 (73)
T KOG1603|consen    5 KTVVLKVNMHCEGC---ARKVKRVLQKLKGVESVDIDIKKQKVTVKGNVDPVKLLKKLKKTGGKRAELWKV   72 (73)
T ss_pred             cEEEEEECcccccH---HHHHHHHhhccCCeEEEEecCCCCEEEEEEecCHHHHHHHHHhcCCCceEEecC
Confidence            45788888888777   689999999999999999999999999999999999999998888 88888854

>PF00403 HMA: Heavy-metal-associated domain; InterPro: IPR006121 Proteins that transport heavy metals in micro-organisms and mammals share similarities in their sequences and structures

Probab=99.31  E-value=9.2e-12  Score=92.17  Aligned_cols=58  Identities=24%  Similarity=0.235  Sum_probs=52.8

Q ss_pred             EeeecCCchhHHHHHHHhHcCCCCeeEEEEeCCCCEEEEEecCC---HHHHHHHHHHcCCc
Q 018608            7 LVLYSFSSKLKASIFLNWVLFIFGVYTTKIDLRQHKVVVKGDVA---AETLIGKLEKNGKH   64 (353)
Q Consensus         7 V~L~CmsC~~CA~kVkKaLskIeGVesVeVDLe~qkVTVtG~VD---p~~LlkaIkKtGK~   64 (353)
                      +.+..|+|.+|+++|+++|++++||.+|+||+..++|+|+++.+   .++|+++|+++||+
T Consensus         2 ~~v~~m~C~~C~~~v~~~l~~~~GV~~v~vd~~~~~v~v~~~~~~~~~~~i~~~i~~~Gy~   62 (62)
T PF00403_consen    2 FKVPGMTCEGCAKKVEKALSKLPGVKSVKVDLETKTVTVTYDPDKTSIEKIIEAIEKAGYE   62 (62)
T ss_dssp             EEEESTTSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEESTTTSCHHHHHHHHHHTTSE
T ss_pred             EEECCcccHHHHHHHHHHHhcCCCCcEEEEECCCCEEEEEEecCCCCHHHHHHHHHHhCcC
Confidence            34568999999999999999999999999999999999999754   59999999999985

These proteins provide an important focus for research, some being involved in bacterial resistance to toxic metals, such as lead and cadmium, while others are involved in inherited human syndromes, such as Wilson's and Menke's diseases []. A conserved domain has been found in a number of these heavy metal transport or detoxification proteins []. The domain, which has been termed Heavy-Metal-Associated (HMA), contains two conserved cysteines that are probably involved in metal binding. Structure solution of the fourth HMA domain of the Menke's copper transporting ATPase shows a well-defined structure comprising a four-stranded antiparallel beta-sheet and two alpha helices packed in an alpha-beta sandwich fold []. This fold is common to other domains and is classified as "ferredoxin-like".; GO: 0046872 metal ion binding, 0030001 metal ion transport; PDB: 2VOY_A 1P6T_A 1KQK_A 2RML_A 1JWW_A 3K7R_F 1FES_A 1CC8_A 1FD8_A 2GGP_A ....

>COG2608 CopZ Copper chaperone [Inorganic ion transport and metabolism]

Probab=99.22  E-value=4.8e-11  Score=92.86  Aligned_cols=64  Identities=19%  Similarity=0.196  Sum_probs=56.6

Q ss_pred             EEEeeecCCchhHHHHHHHhHcCCCCeeEEEEeCCCCEEEE--Ee-cCCHHHHHHHHHHcCCceEEC
Q 018608            5 LSLVLYSFSSKLKASIFLNWVLFIFGVYTTKIDLRQHKVVV--KG-DVAAETLIGKLEKNGKHAELW   68 (353)
Q Consensus         5 l~V~L~CmsC~~CA~kVkKaLskIeGVesVeVDLe~qkVTV--tG-~VDp~~LlkaIkKtGK~AeL~   68 (353)
                      +.+.+..|+|++|+.+|+++|.+|+||.+|+|||+.++++|  .+ .++.++|+++|+++||.+..+
T Consensus         4 ~~l~v~~MtC~~C~~~V~~al~~v~gv~~v~v~l~~~~~~V~~d~~~~~~~~i~~ai~~aGy~~~~~   70 (71)
T COG2608           4 TTLKVEGMTCGHCVKTVEKALEEVDGVASVDVDLEKGTATVTFDSNKVDIEAIIEAIEDAGYKVEEI   70 (71)
T ss_pred             EEEEECCcCcHHHHHHHHHHHhcCCCeeEEEEEcccCeEEEEEcCCcCCHHHHHHHHHHcCCCeeec
Confidence            45667899999999999999999999999999999955555  56 689999999999999998865

>KOG4656 consensus Copper chaperone for superoxide dismutase [Inorganic ion transport and metabolism]

Probab=99.10  E-value=1.7e-10  Score=107.90  Aligned_cols=68  Identities=19%  Similarity=0.246  Sum_probs=62.6

Q ss_pred             EEEEEeeecCCchhHHHHHHHhHcCCCCeeEEEEeCCCCEEEEEecCCHHHHHHHHHHcCCceEECCCCCc
Q 018608            3 YTLSLVLYSFSSKLKASIFLNWVLFIFGVYTTKIDLRQHKVVVKGDVAAETLIGKLEKNGKHAELWPESKA   73 (353)
Q Consensus         3 ~vl~V~L~CmsC~~CA~kVkKaLskIeGVesVeVDLe~qkVTVtG~VDp~~LlkaIkKtGK~AeL~~~~p~   73 (353)
                      +.|+|.|+   |+.|+.+||++|..++||++|+|||++|.|.|.+.+++.+|+.+|+.+|++|.|.+...+
T Consensus         9 ~efaV~M~---cescvnavk~~L~~V~Gi~~vevdle~q~v~v~ts~p~s~i~~~le~tGr~Avl~G~G~p   76 (247)
T KOG4656|consen    9 AEFAVQMT---CESCVNAVKACLKGVPGINSVEVDLEQQIVSVETSVPPSEIQNTLENTGRDAVLRGAGKP   76 (247)
T ss_pred             EEEEEech---hHHHHHHHHHHhccCCCcceEEEEhhhcEEEEEccCChHHHHHHHHhhChheEEecCCch
Confidence            57888888   555599999999999999999999999999999999999999999999999999998743

>PLN02957 copper, zinc superoxide dismutase

Probab=98.27  E-value=5.6e-06  Score=77.84  Aligned_cols=61  Identities=21%  Similarity=0.278  Sum_probs=58.0

Q ss_pred             cCCchhHHHHHHHhHcCCCCeeEEEEeCCCCEEEEEecCCHHHHHHHHHHcCCceEECCCC
Q 018608           11 SFSSKLKASIFLNWVLFIFGVYTTKIDLRQHKVVVKGDVAAETLIGKLEKNGKHAELWPES   71 (353)
Q Consensus        11 CmsC~~CA~kVkKaLskIeGVesVeVDLe~qkVTVtG~VDp~~LlkaIkKtGK~AeL~~~~   71 (353)
                      +|+|..|+..|+++|.+++||..+.+|+..++++|+..++...|+++|+++|+.+++++..
T Consensus        13 gMsC~~Ca~~Iek~L~~~~GV~~v~vn~~~~~v~V~~~~~~~~I~~aIe~~Gy~a~~~~~~   73 (238)
T PLN02957         13 DMKCEGCVAAVKNKLETLEGVKAVEVDLSNQVVRVLGSSPVKAMTAALEQTGRKARLIGQG   73 (238)
T ss_pred             CccCHHHHHHHHHHHhcCCCeEEEEEEcCCCEEEEEecCCHHHHHHHHHHcCCcEEEecCC
Confidence            5999999999999999999999999999999999998889999999999999999999884

>PRK10671 copA copper exporting ATPase; Provisional

Probab=98.25  E-value=2.2e-06  Score=92.50  Aligned_cols=67  Identities=21%  Similarity=0.181  Sum_probs=60.8

Q ss_pred             CeEEEEEeeecCCchhHHHHHHHhHcCCCCeeEEEEeCCCCEEEEEecCCHHHHHHHHHHcCCceEECC
Q 018608            1 MFYTLSLVLYSFSSKLKASIFLNWVLFIFGVYTTKIDLRQHKVVVKGDVAAETLIGKLEKNGKHAELWP   69 (353)
Q Consensus         1 ~~~vl~V~L~CmsC~~CA~kVkKaLskIeGVesVeVDLe~qkVTVtG~VDp~~LlkaIkKtGK~AeL~~   69 (353)
                      |-.+..+.+.||+|++|+.+|+++|.+++||.+|+||++  +++|++.++.+.|+++|++.||.+++..
T Consensus         1 ~~~~~~l~V~gmtC~~C~~~i~~al~~~~gv~~v~v~~~--~~~v~~~~~~~~i~~~i~~~Gy~~~~~~   67 (834)
T PRK10671          1 MSQTIDLTLDGLSCGHCVKRVKESLEQRPDVEQADVSIT--EAHVTGTASAEALIETIKQAGYDASVSH   67 (834)
T ss_pred             CCeEEEEEECCcccHHHHHHHHHHHhcCCCcceEEEeee--EEEEEecCCHHHHHHHHHhcCCcccccc
Confidence            556778888999999999999999999999999999994  6777788999999999999999999865

>TIGR00003 copper ion binding protein

Probab=97.62  E-value=0.00065  Score=45.26  Aligned_cols=61  Identities=13%  Similarity=0.148  Sum_probs=52.0

Q ss_pred             EEEeeecCCchhHHHHHHHhHcCCCCeeEEEEeCCCCEEEEEe---cCCHHHHHHHHHHcCCce
Q 018608            5 LSLVLYSFSSKLKASIFLNWVLFIFGVYTTKIDLRQHKVVVKG---DVAAETLIGKLEKNGKHA   65 (353)
Q Consensus         5 l~V~L~CmsC~~CA~kVkKaLskIeGVesVeVDLe~qkVTVtG---~VDp~~LlkaIkKtGK~A   65 (353)
                      +.+.+.++.|..|+..|++.|..+++|..+.+++...+++|+-   .++...|+..|...|+.+
T Consensus         4 ~~~~v~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~   67 (68)
T TIGR00003         4 FTVQVMSMTCQHCVDKIEKFVGELEGVSKVQVKLEKASVKVEFDAPQATEICIAEAILDAGYEV   67 (68)
T ss_pred             EEEEECCeEcHHHHHHHHHHHhcCCCEEEEEEEcCCCEEEEEeCCCCCCHHHHHHHHHHcCCCc
Confidence            4577889999999999999999999999999999999999874   357778888887777654

This model describes an apparently copper-specific subfamily of the metal-binding domain HMA (Pfam family pfam00403). Closely related sequences outside this model include mercury resistance proteins and repeated domains of eukaryotic eukaryotic copper transport proteins. Members of this family are strictly prokaryotic. The model identifies both small proteins consisting of just this domain and N-terminal regions of cation (probably copper) transporting ATPases.

>COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism]

Probab=97.12  E-value=0.0012  Score=71.56  Aligned_cols=63  Identities=24%  Similarity=0.250  Sum_probs=57.1

Q ss_pred             EEEEeeecCCchhHHHHHHHhHcCCCCeeEEEEeCCCCEEEEEec---CC-HHHHHHHHHHcCCceEE
Q 018608            4 TLSLVLYSFSSKLKASIFLNWVLFIFGVYTTKIDLRQHKVVVKGD---VA-AETLIGKLEKNGKHAEL   67 (353)
Q Consensus         4 vl~V~L~CmsC~~CA~kVkKaLskIeGVesVeVDLe~qkVTVtG~---VD-p~~LlkaIkKtGK~AeL   67 (353)
                      .+.+.+++|+|..|+.+|+ +|.+++||.++.|++...+++|..+   ++ .+.++.+|+++|+.+..
T Consensus         3 ~~~l~v~Gm~Ca~C~~~ie-~l~~~~gV~~~~vn~~t~~~~v~~~~~~~~~~~~~~~~v~~~gy~~~~   69 (713)
T COG2217           3 ETSLSVEGMTCAACASRIE-ALNKLPGVEEARVNLATERATVVYDPEEVDLPADIVAAVEKAGYSARL   69 (713)
T ss_pred             eeEEeecCcCcHHHHHHHH-HHhcCCCeeEEEeecccceEEEEecccccccHHHHHHHHHhcCccccc
Confidence            4567889999999999999 9999999999999999999999754   56 78999999999999876

>PRK10671 copA copper exporting ATPase; Provisional

Probab=96.75  E-value=0.004  Score=67.79  Aligned_cols=66  Identities=24%  Similarity=0.297  Sum_probs=59.2

Q ss_pred             EEEEeeecCCchhHHHHHHHhHcCCCCeeEEEEeCCCCEEEEEecCCHHHHHHHHHHcCCceEECC
Q 018608            4 TLSLVLYSFSSKLKASIFLNWVLFIFGVYTTKIDLRQHKVVVKGDVAAETLIGKLEKNGKHAELWP   69 (353)
Q Consensus         4 vl~V~L~CmsC~~CA~kVkKaLskIeGVesVeVDLe~qkVTVtG~VDp~~LlkaIkKtGK~AeL~~   69 (353)
                      ++.+.+.+|+|.+|+..|++.|.+++||.++.+++..+++.|.+..+...|++.|++.|+.+.++.
T Consensus       100 ~~~l~V~Gm~Ca~Ca~~Ie~~L~~~~GV~~a~vnl~t~~~~V~~~~s~~~I~~~I~~~Gy~a~~~~  165 (834)
T PRK10671        100 SQQLLLSGMSCASCVSRVQNALQSVPGVTQARVNLAERTALVMGSASPQDLVQAVEKAGYGAEAIE  165 (834)
T ss_pred             eEEEEeCCcCcHHHHHHHHHHHhcCCCceeeeeecCCCeEEEEccCCHHHHHHHHHhcCCCccccc
Confidence            345668999999999999999999999999999999999999877889999999999999987654

>KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism]

Probab=96.66  E-value=0.0028  Score=70.05  Aligned_cols=63  Identities=19%  Similarity=0.191  Sum_probs=57.7

Q ss_pred             ecCCchhHHHHHHHhHcCCCCeeEEEEeCCCCEEEEE--ecCCHHHHHHHHHHcCCceEECCCCC
Q 018608           10 YSFSSKLKASIFLNWVLFIFGVYTTKIDLRQHKVVVK--GDVAAETLIGKLEKNGKHAELWPESK   72 (353)
Q Consensus        10 ~CmsC~~CA~kVkKaLskIeGVesVeVDLe~qkVTVt--G~VDp~~LlkaIkKtGK~AeL~~~~p   72 (353)
                      ++|+|..|++.|.++|+..+||.+++|++.+++.+|.  -.++++.|.++|+..|+++++.....
T Consensus         1 ~gmtc~ac~~si~~~~~~~~g~~~i~vsl~~~~~~v~~~~~~~~~~i~~~ied~gf~~~~~~~~~   65 (951)
T KOG0207|consen    1 KGMTCSACSNSIEKAISRKPGVQKIEVSLAQKRANVSYDNIVSPESIKETIEDMGFEASLLSDSE   65 (951)
T ss_pred             CCccHHHHhhhHHHHHhcCCCceeEEEEeccccceEEEeeccCHHHHHHHhhcccceeeecccCc
Confidence            4799999999999999999999999999999999885  45899999999999999999987753

>KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism]

Probab=95.45  E-value=0.036  Score=61.64  Aligned_cols=66  Identities=17%  Similarity=0.168  Sum_probs=59.2

Q ss_pred             EEEeeecCCchhHHHHHHHhHcCCCCeeEEEEeCCCCEEEEEe---cCCHHHHHHHHHHcCCceEECCC
Q 018608            5 LSLVLYSFSSKLKASIFLNWVLFIFGVYTTKIDLRQHKVVVKG---DVAAETLIGKLEKNGKHAELWPE   70 (353)
Q Consensus         5 l~V~L~CmsC~~CA~kVkKaLskIeGVesVeVDLe~qkVTVtG---~VDp~~LlkaIkKtGK~AeL~~~   70 (353)
                      +-+....|.|..|+.+|.+.|.+++||.+++||+..++++|.=   ...+-.|++.|+.+|+.+.+...
T Consensus       148 i~L~v~g~~c~s~~~~ie~~l~~l~gV~~~sv~~~t~~~~V~~~~~~~~pr~i~k~ie~~~~~~~~~~~  216 (951)
T KOG0207|consen  148 IYLDVLGMTCASCVSKIESILERLRGVKSFSVSLATDTAIVVYDPEITGPRDIIKAIEETGFEASVRPY  216 (951)
T ss_pred             EEEEeecccccchhhhhHHHHhhccCeeEEEEeccCCceEEEecccccChHHHHHHHHhhcccceeeec
Confidence            4566789999999999999999999999999999999999964   36888999999999999888774

>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional

Probab=95.44  E-value=0.041  Score=59.72  Aligned_cols=64  Identities=19%  Similarity=0.126  Sum_probs=53.5

Q ss_pred             EEEEeeecCCchhHHHHHHHhHcCCCCeeEEEEeCCCCEEEEEec--CCHHHHHHHHHHcCCceEEC
Q 018608            4 TLSLVLYSFSSKLKASIFLNWVLFIFGVYTTKIDLRQHKVVVKGD--VAAETLIGKLEKNGKHAELW   68 (353)
Q Consensus         4 vl~V~L~CmsC~~CA~kVkKaLskIeGVesVeVDLe~qkVTVtG~--VDp~~LlkaIkKtGK~AeL~   68 (353)
                      ++.+.+..|+|.+|+..|++.|.+++||.++.+++...++.|.-+  .+ ..|.+.++++|+.+..+
T Consensus        54 r~~l~V~Gm~C~sCa~~Ie~aL~~~~GV~~v~Vn~at~k~~V~~d~~~~-~~I~~aI~~~Gy~a~~~  119 (741)
T PRK11033         54 RYSWKVSGMDCPSCARKVENAVRQLAGVNQVQVLFATEKLVVDADNDIR-AQVESAVQKAGFSLRDE  119 (741)
T ss_pred             eEEEEECCCCcHHHHHHHHHHHhcCCCeeeEEEEcCCCeEEEEecccch-HHHHHHHHhcccccccc
Confidence            345668899999999999999999999999999999999888632  33 67778888999987654

>TIGR02052 MerP mercuric transport protein periplasmic component

Probab=94.29  E-value=0.57  Score=34.75  Aligned_cols=63  Identities=13%  Similarity=0.105  Sum_probs=49.2

Q ss_pred             EEEeeecCCchhHHHHHHHhHcCCCCeeEEEEeCCCCEEEEEe---cCCHHHHHHHHHHcCCceEE
Q 018608            5 LSLVLYSFSSKLKASIFLNWVLFIFGVYTTKIDLRQHKVVVKG---DVAAETLIGKLEKNGKHAEL   67 (353)
Q Consensus         5 l~V~L~CmsC~~CA~kVkKaLskIeGVesVeVDLe~qkVTVtG---~VDp~~LlkaIkKtGK~AeL   67 (353)
                      ..+...++.|..|...++..+..+++|....+++....+.+.-   ..+...+...+++.|+.+++
T Consensus        25 ~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~   90 (92)
T TIGR02052        25 VTLEVPGMTCVACPITVETALQKVDGVSKAEVTFKTKLAVVTFDDEKTNVKALTEATTDAGYPSSL   90 (92)
T ss_pred             EEEEECCeEcHHHHHHHHHHHhcCCCEEEEEEEecCCEEEEEECCCCCCHHHHHHHHHhcCCCeEe
Confidence            3466788899999999999999999999888888888866652   24666666677777877654

This model represents the periplasmic mercury (II) binding protein of the bacterial mercury detoxification system which passes mercuric ion to the MerT transporter for subsequent reduction to Hg(0) by the mercuric reductase MerA. MerP contains a distinctive GMTCXXC motif associated with metal binding. MerP is related to a larger family of metal binding proteins (pfam00403).

>cd00371 HMA Heavy-metal-associated domain (HMA) is a conserved domain of approximately 30 amino acid residues found in a number of proteins that transport or detoxify heavy metals, for example, the CPx-type heavy metal ATPases and copper chaperones

Probab=92.77  E-value=1.2  Score=26.37  Aligned_cols=54  Identities=22%  Similarity=0.228  Sum_probs=38.2

Q ss_pred             eecCCchhHHHHHHHhHcCCCCeeEEEEeCCCCEEEEEecC--CHHHHHHHHHHcC
Q 018608            9 LYSFSSKLKASIFLNWVLFIFGVYTTKIDLRQHKVVVKGDV--AAETLIGKLEKNG   62 (353)
Q Consensus         9 L~CmsC~~CA~kVkKaLskIeGVesVeVDLe~qkVTVtG~V--Dp~~LlkaIkKtG   62 (353)
                      +..+.|..|...++..+..+.++....+++....+.+....  +...+...++..+
T Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   59 (63)
T cd00371           4 VEGMTCAGCVSKIEKALEKLPGVESVEVDLETGKATVEYDPEVSPEELLEAIEDAG   59 (63)
T ss_pred             ECCeEcHHHHHHHHHHHhcCCCEeEEEEEccCCEEEEEECCCCCHHHHHHHHHHcC
Confidence            45677889999999888889998888888877776665432  5555544444444

HMA domain contains two cysteine residues that are important in binding and transfer of metal ions, such as copper, cadmium, cobalt and zinc. In the case of copper, stoichiometry of binding is one Cu+ ion per binding domain. Repeats of the HMA domain in copper chaperone has been associated with Menkes/Wilson disease due to binding of multiple copper ions.

>COG1888 Uncharacterized protein conserved in archaea [Function unknown]

Probab=89.99  E-value=0.59  Score=39.57  Aligned_cols=48  Identities=13%  Similarity=0.166  Sum_probs=36.4

Q ss_pred             HHHHHhHcCCCCeeEEE-------EeCCCCEEEEEe-cCCHHHHHHHHHHcCCceE
Q 018608           19 SIFLNWVLFIFGVYTTK-------IDLRQHKVVVKG-DVAAETLIGKLEKNGKHAE   66 (353)
Q Consensus        19 ~kVkKaLskIeGVesVe-------VDLe~qkVTVtG-~VDp~~LlkaIkKtGK~Ae   66 (353)
                      -.+-+.|++|+||+.|.       ++...=++||.| ++|.+.|.+.|++.|..+.
T Consensus        22 ve~A~~lskl~gVegVNItv~eiD~et~~~~itIeG~~ldydei~~~iE~~Gg~IH   77 (97)
T COG1888          22 VELALELSKLEGVEGVNITVTEIDVETENLKITIEGTNLDYDEIEEVIEELGGAIH   77 (97)
T ss_pred             HHHHHHHhhcCCcceEEEEEEEeeehhcceEEEEEcCCCCHHHHHHHHHHcCCeee
Confidence            34567788888877544       345566788888 6999999999999997654

>PF02680 DUF211: Uncharacterized ArCR, COG1888; InterPro: IPR003831 This entry describes proteins of unknown function

Probab=86.45  E-value=1.1  Score=38.06  Aligned_cols=47  Identities=19%  Similarity=0.278  Sum_probs=34.2

Q ss_pred             HHHHHhHcCCCCeeEEEE-----eCCCC--EEEEEec-CCHHHHHHHHHHcCCce
Q 018608           19 SIFLNWVLFIFGVYTTKI-----DLRQH--KVVVKGD-VAAETLIGKLEKNGKHA   65 (353)
Q Consensus        19 ~kVkKaLskIeGVesVeV-----DLe~q--kVTVtG~-VDp~~LlkaIkKtGK~A   65 (353)
                      -.+-++|++++||+.|.+     |.+..  +|||.|+ +|.+.|.++|++.|-.+
T Consensus        20 ~e~A~~l~~~~gV~gVnitv~EvD~ete~lkitiEG~~id~d~i~~~Ie~~Gg~I   74 (95)
T PF02680_consen   20 VELAKALSELEGVDGVNITVVEVDVETENLKITIEGDDIDFDEIKEAIEELGGVI   74 (95)
T ss_dssp             HHHHHHHHTSTTEEEEEEEEEEE-SSEEEEEEEEEESSE-HHHHHHHHHHTT-EE
T ss_pred             HHHHHHHHhCCCcceEEEEEEEeeccccEEEEEEEeCCCCHHHHHHHHHHcCCeE
Confidence            467788999999987654     44444  4566885 99999999999998654

; PDB: 3BPD_I 2RAQ_F 2X3D_E.

>PRK13748 putative mercuric reductase; Provisional

Probab=86.37  E-value=3.5  Score=42.54  Aligned_cols=64  Identities=13%  Similarity=0.094  Sum_probs=49.5

Q ss_pred             EeeecCCchhHHHHHHHhHcCCCCeeEEEEeCCCCEEEEEe--cCCHHHHHHHHHHcCCceEECCC
Q 018608            7 LVLYSFSSKLKASIFLNWVLFIFGVYTTKIDLRQHKVVVKG--DVAAETLIGKLEKNGKHAELWPE   70 (353)
Q Consensus         7 V~L~CmsC~~CA~kVkKaLskIeGVesVeVDLe~qkVTVtG--~VDp~~LlkaIkKtGK~AeL~~~   70 (353)
                      +.+++++|.+|+..++..+..+++|....+++....+.+..  ..+...+...++..++.++++..
T Consensus         4 i~i~g~~C~~c~~~ie~~l~~~~gv~~a~~~~~~~~~~v~~~~~~~~~~i~~~i~~~g~~~~~~~~   69 (561)
T PRK13748          4 LKITGMTCDSCAAHVKDALEKVPGVQSADVSYPKGSAQLAIEVGTSPDALTAAVAGLGYRATLADA   69 (561)
T ss_pred             EEECCeecHHHHHHHHHHHhcCCCeeEEEEEcCCCEEEEEECCCCCHHHHHHHHHHcCCeeeccCc
Confidence            44688999999999999999999999999999999887763  24566666666666666554444

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	353
3iwl_A	68	Copper transport protein ATOX1; beta-alpha-beta-BE	99.44
1cc8_A	73	Protein (metallochaperone ATX1); copper transport,	99.4
4a4j_A	69	Pacszia, cation-transporting ATPase PACS; hydrolas	99.36
3fry_A	73	Probable copper-exporting P-type ATPase A; transpo	99.27
2crl_A	98	Copper chaperone for superoxide dismutase; SOD1, f	99.27
3dxs_X	74	Copper-transporting ATPase RAN1; CXXC motif, ferre	99.27
2xmm_A	64	SSR2857 protein, ATX1; metal transport, copper hom	99.2
2xmw_A	71	PACS-N, cation-transporting ATPase PACS; hydrolase	99.2
2roe_A	66	Heavy metal binding protein; NMR {Thermus thermoph	99.15
1aw0_A	72	Menkes copper-transporting ATPase; copper-binding	99.08
3cjk_B	75	Copper-transporting ATPase 1; HAH1, ATP7B, menkes	99.08
2l3m_A	71	Copper-ION-binding protein; structural genomics, c	99.08
1fvq_A	72	Copper-transporting ATPase; APO-CCC2A, hydrolase;	99.07
1cpz_A	68	Protein (COPZ); copper chaperone, metal transport,	99.06
1osd_A	72	MERP, hypothetical protein MERP; mercury resistanc	99.06
1q8l_A	84	Copper-transporting ATPase 1; metal binding protei	99.04
2kt2_A	69	Mercuric reductase; nmera, MERA, HMA domain, mercu	99.01
2qif_A	69	Copper chaperone COPZ; tetranuclear Cu(I) cluster;	99.01
2k2p_A	85	Uncharacterized protein ATU1203; putative metal-bi	99.01
2g9o_A	90	Copper-transporting ATPase 1; menkes disease, solu	99.0
1opz_A	76	Potential copper-transporting ATPase; mutation, fo	99.0
1mwy_A	73	ZNTA; open-faced beta-sandwich fold, beta-alpha-be	99.0
1yg0_A	66	COP associated protein; open-faced beta-sandwich,	98.99
1qup_A	222	Superoxide dismutase 1 copper chaperone; two domai	98.99
2kyz_A	67	Heavy metal binding protein; structural genomics,	98.99
1yjr_A	75	Copper-transporting ATPase 1; metallochaperone, pr	98.98
1kvi_A	79	Copper-transporting ATPase 1; menkes, Cu-protein,	98.97
1y3j_A	77	Copper-transporting ATPase 1; ferrodoxin-like fold	98.94
2ldi_A	71	Zinc-transporting ATPase; metal homeostasis, metal	98.93
1jww_A	80	Potential copper-transporting ATPase; beta-alpha-b	98.9
2ew9_A	149	Copper-transporting ATPase 2; copper trafficking,	98.89
1p6t_A	151	Potential copper-transporting ATPase; COPA, P-type	98.87
1jk9_B	249	CCS, copper chaperone for superoxide dismutase; pr	98.87
2aj0_A	71	Probable cadmium-transporting ATPase; ferrodoxin-l	98.86
2kkh_A	95	Putative heavy metal transporter; zinc transport,	98.85
2ofg_X	111	Zinc-transporting ATPase; ferredoxin-like fold, be	98.8
2rop_A	202	Copper-transporting ATPase 2; wilson protein, mobi	98.74
2ew9_A	149	Copper-transporting ATPase 2; copper trafficking,	98.66
1p6t_A	151	Potential copper-transporting ATPase; COPA, P-type	98.36
2rop_A	202	Copper-transporting ATPase 2; wilson protein, mobi	98.34
3j09_A	723	COPA, copper-exporting P-type ATPase A; copper tra	98.02
3bpd_A	100	Uncharacterized protein; heptamer, Mg+2 ION, PSI-2	88.02
2x3d_A	96	SSO6206; unknown function; 2.70A {Sulfolobus solfa	87.14
2raq_A	97	Conserved protein MTH889; alpha-beta protein, stru	85.57

>3iwl_A Copper transport protein ATOX1; beta-alpha-beta-BETA-alpha-beta, cisplatin, platinum, chaperone, ION transport, metal-binding, metal transport; HET: TCE; 1.60A {Homo sapiens} SCOP: d.58.17.1 PDB: 1fe4_A* 1fee_A* 1tl4_A 1tl5_A 2k1r_B 1fe0_A* 3iwx_A 3cjk_A

Probab=99.44  E-value=3e-13  Score=99.19  Aligned_cols=63  Identities=22%  Similarity=0.263  Sum_probs=59.4

Q ss_pred             EEeeecCCchhHHHHHHHhHcCCCCeeEEEEeCCCCEEEEEecCCHHHHHHHHHHcCCceEECCC
Q 018608            6 SLVLYSFSSKLKASIFLNWVLFIFGVYTTKIDLRQHKVVVKGDVAAETLIGKLEKNGKHAELWPE   70 (353)
Q Consensus         6 ~V~L~CmsC~~CA~kVkKaLskIeGVesVeVDLe~qkVTVtG~VDp~~LlkaIkKtGK~AeL~~~   70 (353)
                      .+.+ .|+|.+|+.+|+++|.+++|| +++||+..++++|++.++++.|+++|+++||.+++|+.
T Consensus         5 ~~~v-gm~C~~C~~~i~~~l~~~~gV-~v~v~~~~~~~~v~~~~~~~~i~~~i~~~Gy~~~~~~~   67 (68)
T 3iwl_A            5 EFSV-DMTCGGCAEAVSRVLNKLGGV-KYDIDLPNKKVCIESEHSMDTLLATLKKTGKTVSYLGL   67 (68)
T ss_dssp             EEEE-CCCSHHHHHHHHHHHHHHCSE-EEEEETTTTEEEEEESSCHHHHHHHHHTTCSCEEEEEC
T ss_pred             EEEE-CcCcHHHHHHHHHHHHcCCCe-EEEEEcCCCEEEEEecCCHHHHHHHHHHcCCceEecCC
Confidence            4455 899999999999999999999 99999999999999999999999999999999999975

>1cc8_A Protein (metallochaperone ATX1); copper transport, mercury coordination, metal transport; 1.02A {Saccharomyces cerevisiae} SCOP: d.58.17.1 PDB: 1cc7_A 1fd8_A 1fes_A 2ggp_A 3k7r_A

Probab=99.40  E-value=1.8e-12  Score=95.34  Aligned_cols=67  Identities=13%  Similarity=0.102  Sum_probs=60.7

Q ss_pred             EEEEEeeecCCchhHHHHHHHhHcCCC-CeeEEEEeCCCCEEEEEecCCHHHHHHHHHHcCCceEECCC
Q 018608            3 YTLSLVLYSFSSKLKASIFLNWVLFIF-GVYTTKIDLRQHKVVVKGDVAAETLIGKLEKNGKHAELWPE   70 (353)
Q Consensus         3 ~vl~V~L~CmsC~~CA~kVkKaLskIe-GVesVeVDLe~qkVTVtG~VDp~~LlkaIkKtGK~AeL~~~   70 (353)
                      ..+.+.+. |+|.+|+.+|+++|.+++ ||.+++||+..++++|++.++.+.|+++|+++||.+++|..
T Consensus         5 ~~~~~~v~-m~C~~C~~~ie~~l~~~~~GV~~~~v~~~~~~~~v~~~~~~~~i~~~i~~~Gy~~~~~~~   72 (73)
T 1cc8_A            5 KHYQFNVV-MTCSGCSGAVNKVLTKLEPDVSKIDISLEKQLVDVYTTLPYDFILEKIKKTGKEVRSGKQ   72 (73)
T ss_dssp             EEEEEEEC-CCSHHHHHHHHHHHHTTTTSEEEEEEETTTTEEEEEESSCHHHHHHHHHTTSSCEEEEEE
T ss_pred             eEEEEEEe-eECHHHHHHHHHHHHhCCCCceEEEEECCCCEEEEEEeCCHHHHHHHHHHhCCCceeeec
Confidence            34445556 999999999999999999 99999999999999999999999999999999999998753

>4a4j_A Pacszia, cation-transporting ATPase PACS; hydrolase, copper homeostasis, zinc homeostasis, ATX1, metal-transporting atpases; 1.25A {Synechocystis} PDB: 4a48_A 2gcf_A 2xmw_A

Probab=99.36  E-value=4.1e-12  Score=91.72  Aligned_cols=65  Identities=23%  Similarity=0.334  Sum_probs=60.7

Q ss_pred             EEEEeeecCCchhHHHHHHHhHcCCCCeeEEEEeCCCCEEEEE--ecCCHHHHHHHHHHcCCceEEC
Q 018608            4 TLSLVLYSFSSKLKASIFLNWVLFIFGVYTTKIDLRQHKVVVK--GDVAAETLIGKLEKNGKHAELW   68 (353)
Q Consensus         4 vl~V~L~CmsC~~CA~kVkKaLskIeGVesVeVDLe~qkVTVt--G~VDp~~LlkaIkKtGK~AeL~   68 (353)
                      .+.+.+..|+|.+|+.+|+++|.+++||.+++||+..++++|+  +.++.+.|+++|+++||.++++
T Consensus         3 ~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~i~~~i~~~Gy~~~~~   69 (69)
T 4a4j_A            3 TINLQLEGMDCTSCASSIERAIAKVPGVQSCQVNFALEQAVVSYHGETTPQILTDAVERAGYHARVL   69 (69)
T ss_dssp             EEEEEEESCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTCCHHHHHHHHHHTTCEEEEC
T ss_pred             EEEEEECCeecHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCHHHHHHHHHHcCCceEeC
Confidence            4567789999999999999999999999999999999999998  7899999999999999999874

>3fry_A Probable copper-exporting P-type ATPase A; transport protein, metal binding domain, domain SWAP, ATP-BI cell membrane, copper transport; HET: CIT; 2.00A {Archaeoglobus fulgidus}

Probab=99.27  E-value=1e-11  Score=91.94  Aligned_cols=68  Identities=19%  Similarity=0.165  Sum_probs=62.9

Q ss_pred             CeEEEEEeeecCCchhHHHHHHHhHcCCCCeeEEEEeCCCCEEEEEecCCHHHHHHHHHHcCCceEECCC
Q 018608            1 MFYTLSLVLYSFSSKLKASIFLNWVLFIFGVYTTKIDLRQHKVVVKGDVAAETLIGKLEKNGKHAELWPE   70 (353)
Q Consensus         1 ~~~vl~V~L~CmsC~~CA~kVkKaLskIeGVesVeVDLe~qkVTVtG~VDp~~LlkaIkKtGK~AeL~~~   70 (353)
                      |...+.+.+..|+|.+|+.+|+++|.+ +||..++||+..++++|+.+ +.+.|+++|+++||.+++++.
T Consensus         3 ~m~~~~~~v~gm~C~~C~~~ie~~l~~-~gv~~~~v~~~~~~~~v~~~-~~~~i~~~i~~~Gy~~~~~~~   70 (73)
T 3fry_A            3 SVEKIVLELSGLSCHHCVARVKKALEE-AGAKVEKVDLNEAVVAGNKE-DVDKYIKAVEAAGYQAKLRSS   70 (73)
T ss_dssp             CCEEEEEEEESSBCGGGHHHHHHHHHH-TTCEEEEECSSEEEEEEEGG-GHHHHHHHHHHTTCEEEECCS
T ss_pred             ccEEEEEEECCCCCHHHHHHHHHHhcc-CCcEEEEEEccCCEEEEEEC-CHHHHHHHHHHcCCceEecCc
Confidence            345677888999999999999999999 99999999999999999999 999999999999999998874

>2crl_A Copper chaperone for superoxide dismutase; SOD1, familial ALS, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.27  E-value=1.4e-11  Score=97.83  Aligned_cols=68  Identities=16%  Similarity=0.210  Sum_probs=61.8

Q ss_pred             EEEeeecCCchhHHHHHHHhHcCCCCeeEEEEeCCCCEEEEEecCCHHHHHHHHHHcCCceEECCCCCc
Q 018608            5 LSLVLYSFSSKLKASIFLNWVLFIFGVYTTKIDLRQHKVVVKGDVAAETLIGKLEKNGKHAELWPESKA   73 (353)
Q Consensus         5 l~V~L~CmsC~~CA~kVkKaLskIeGVesVeVDLe~qkVTVtG~VDp~~LlkaIkKtGK~AeL~~~~p~   73 (353)
                      +.+.+. |+|.+|+.+|+++|.+|+||.+|+||+..++|+|+..++.+.|+++|+++||.+++|.....
T Consensus        21 ~~l~V~-m~C~~C~~~Ie~aL~~l~GV~~v~vdl~~~~~~V~~~~~~~~i~~~i~~~Gy~~~~~~~~~~   88 (98)
T 2crl_A           21 LEFAVQ-MTCQSCVDAVRKSLQGVAGVQDVEVHLEDQMVLVHTTLPSQEVQALLEGTGRQAVLKGMGSG   88 (98)
T ss_dssp             EEEEEC-CCSHHHHHHHHHTTTTCTTCCEEEEETTTTEEEEEESSCHHHHHHHHHTTTSCEEEEESCCC
T ss_pred             EEEEEe-eECHHHHHHHHHHHHcCCCceEEEEECCCCEEEEEEeCCHHHHHHHHHHhCCceEEccCCCC
Confidence            344456 99999999999999999999999999999999999999999999999999999999887543

>3dxs_X Copper-transporting ATPase RAN1; CXXC motif, ferredoxin-like fold, ATP- binding, ethylene signaling pathway, hydrolase, ION transport; 1.70A {Arabidopsis thaliana} SCOP: d.58.17.0

Probab=99.27  E-value=2.4e-11  Score=89.02  Aligned_cols=67  Identities=18%  Similarity=0.214  Sum_probs=61.2

Q ss_pred             EEEEeeecCCchhHHHHHHHhHcCCCCeeEEEEeCCCCEEEEEe---cCCHHHHHHHHHHcCCceEECCC
Q 018608            4 TLSLVLYSFSSKLKASIFLNWVLFIFGVYTTKIDLRQHKVVVKG---DVAAETLIGKLEKNGKHAELWPE   70 (353)
Q Consensus         4 vl~V~L~CmsC~~CA~kVkKaLskIeGVesVeVDLe~qkVTVtG---~VDp~~LlkaIkKtGK~AeL~~~   70 (353)
                      .+.+.+..|+|.+|+.+|+++|.+++||.++.||+..++++|+.   .++.+.|+++|+++||.++++..
T Consensus         3 ~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~~   72 (74)
T 3dxs_X            3 KIQVGVTGMTCAACSNSVEAALMNVNGVFKASVALLQNRADVVFDPNLVKEEDIKEEIEDAGFEAEILAE   72 (74)
T ss_dssp             EEEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEEGGGTEEEEEECTTTCCHHHHHHHHHHHTCEEEEEEE
T ss_pred             EEEEEECCcCCHHHHHHHHHHHhcCCCEEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHCCCceEEccC
Confidence            45677899999999999999999999999999999999999975   37999999999999999998753

>2xmm_A SSR2857 protein, ATX1; metal transport, copper homeostasis, chaperone, P-type atpas; 1.65A {Synechocystis SP} PDB: 2xmv_A 1sb6_A 2xmj_A 2xmk_A 2xmt_A 2xmu_A

Probab=99.20  E-value=2e-11  Score=84.67  Aligned_cols=60  Identities=20%  Similarity=0.186  Sum_probs=55.5

Q ss_pred             EeeecCCchhHHHHHHHhHcCCCCeeEEEEeCCCCEEEEEecCCHHHHHHHHHHcCCceE
Q 018608            7 LVLYSFSSKLKASIFLNWVLFIFGVYTTKIDLRQHKVVVKGDVAAETLIGKLEKNGKHAE   66 (353)
Q Consensus         7 V~L~CmsC~~CA~kVkKaLskIeGVesVeVDLe~qkVTVtG~VDp~~LlkaIkKtGK~Ae   66 (353)
                      +.+..|+|.+|+.+|+++|.+++||.++.+|+..++++|++.++.+.|+++|+++||.++
T Consensus         5 ~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~i~~~i~~~G~~~~   64 (64)
T 2xmm_A            5 LTVPTIACEACAEAVTKAVQNEDAQATVQVDLTSKKVTITSALGEEQLRTAIASAGYEVE   64 (64)
T ss_dssp             EECTTCCSHHHHHHHHHHHHHHCTTCEEEECTTTCEEEEECSSCHHHHHHHHHHTTCCCC
T ss_pred             EEECCcCcHHHHHHHHHHHhcCCCcEEEEEEecCCEEEEEecCCHHHHHHHHHHcCCCCC
Confidence            345789999999999999999999999999999999999998999999999999999753

>2xmw_A PACS-N, cation-transporting ATPase PACS; hydrolase, Cu(I)-binding, trafficking; 1.80A {Synechocystis SP} PDB: 2gcf_A

Probab=99.20  E-value=1.4e-10  Score=81.96  Aligned_cols=68  Identities=22%  Similarity=0.256  Sum_probs=59.9

Q ss_pred             CeEEEEEeeecCCchhHHHHHHHhHcCCCCeeEEEEeCCCCEEEEEec--CCHHHHHHHHHHcCCceEEC
Q 018608            1 MFYTLSLVLYSFSSKLKASIFLNWVLFIFGVYTTKIDLRQHKVVVKGD--VAAETLIGKLEKNGKHAELW   68 (353)
Q Consensus         1 ~~~vl~V~L~CmsC~~CA~kVkKaLskIeGVesVeVDLe~qkVTVtG~--VDp~~LlkaIkKtGK~AeL~   68 (353)
                      |...+.+.+..|+|.+|+..|+++|.+++||.++++|+..++++|+.+  ++.+.|+++|+++||.+.++
T Consensus         1 m~~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~i~~~i~~~G~~~~~~   70 (71)
T 2xmw_A            1 MAQTINLQLEGMRCAACASSIERAIAKVPGVQSCQVNFALEQAVVSYHGETTPQILTDAVERAGYHARVL   70 (71)
T ss_dssp             -CEEEEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEEC---CHHHHHHHHHHHTCEEEEE
T ss_pred             CCcEEEEEECCcccHHHHHHHHHHHhcCCCeEEEEEEccCCEEEEEECCCCCHHHHHHHHHHcCCCceeC
Confidence            666777888999999999999999999999999999999999999753  67889999999999988753

>2roe_A Heavy metal binding protein; NMR {Thermus thermophilus} PDB: 2rog_A

Probab=99.15  E-value=6.7e-11  Score=84.15  Aligned_cols=62  Identities=18%  Similarity=0.265  Sum_probs=57.5

Q ss_pred             EeeecCCchhHHHHHHHhHcCCCCeeEEEEeCCCCEEEEEecCCHHHHHHHHHHcCCceEEC
Q 018608            7 LVLYSFSSKLKASIFLNWVLFIFGVYTTKIDLRQHKVVVKGDVAAETLIGKLEKNGKHAELW   68 (353)
Q Consensus         7 V~L~CmsC~~CA~kVkKaLskIeGVesVeVDLe~qkVTVtG~VDp~~LlkaIkKtGK~AeL~   68 (353)
                      +.+..|+|.+|+.+|+++|.+++||.++++|+..++++|.+.++.+.|+++|+++||.+..+
T Consensus         4 ~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~i~~~i~~~Gy~~~~~   65 (66)
T 2roe_A            4 LKVEGMTCNHCVMAVTKALKKVPGVEKVEVSLEKGEALVEGTADPKALVQAVEEEGYKAEVL   65 (66)
T ss_dssp             EEEECCCSHHHHHHHHHHHHTSTTCCCEEECSSSCBEEECSCCCHHHHHHHHHTTTCEEEEC
T ss_pred             EEECCeEcHHHHHHHHHHHHcCCCeEEEEEEeCCCEEEECCCCCHHHHHHHHHHcCCCcEec
Confidence            44578999999999999999999999999999999999988889999999999999998765

>1aw0_A Menkes copper-transporting ATPase; copper-binding domain, hydrolase; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 2aw0_A

Probab=99.08  E-value=6e-10  Score=79.03  Aligned_cols=64  Identities=20%  Similarity=0.172  Sum_probs=57.8

Q ss_pred             EEEeeecCCchhHHHHHHHhHcCCCCeeEEEEeCCCCEEEEEec---CCHHHHHHHHHHcCCceEEC
Q 018608            5 LSLVLYSFSSKLKASIFLNWVLFIFGVYTTKIDLRQHKVVVKGD---VAAETLIGKLEKNGKHAELW   68 (353)
Q Consensus         5 l~V~L~CmsC~~CA~kVkKaLskIeGVesVeVDLe~qkVTVtG~---VDp~~LlkaIkKtGK~AeL~   68 (353)
                      +.+.+..|+|.+|+..|+++|.+++||.++.+|+..++++|..+   ++.+.|+++|+++||.+.+.
T Consensus         5 ~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~~   71 (72)
T 1aw0_A            5 TVINIDGMTCNSCVQSIEGVISKKPGVKSIRVSLANSNGTVEYDPLLTSPETLRGAIEDMGFDATLS   71 (72)
T ss_dssp             EEEEEECCCHHHHHHHHHHHHHTSTTCCCEEEETTTTEEEEEECTTTCCHHHHHHHHHHHTCEEEEC
T ss_pred             EEEEECCeecHHHHHHHHHHHhcCCCeEEEEEEccCCEEEEEECCCcCCHHHHHHHHHHCCCCcEeC
Confidence            45567889999999999999999999999999999999999864   68899999999999998764

>3cjk_B Copper-transporting ATPase 1; HAH1, ATP7B, menkes disease, metal homeostasis, chaperone, ION transport, metal- binding, alternative splicing; 1.80A {Homo sapiens} PDB: 2k1r_A

Probab=99.08  E-value=9.5e-10  Score=79.27  Aligned_cols=67  Identities=13%  Similarity=0.140  Sum_probs=60.0

Q ss_pred             EEEEEeeecCCchhHHHHHHHhHcCCCCeeEEEEeCCCCEEEEEec---CCHHHHHHHHHHcCCceEECC
Q 018608            3 YTLSLVLYSFSSKLKASIFLNWVLFIFGVYTTKIDLRQHKVVVKGD---VAAETLIGKLEKNGKHAELWP   69 (353)
Q Consensus         3 ~vl~V~L~CmsC~~CA~kVkKaLskIeGVesVeVDLe~qkVTVtG~---VDp~~LlkaIkKtGK~AeL~~   69 (353)
                      +.+.+.+..|+|.+|+..|+++|.+++||.++.+|+..++++|..+   ++.+.|+++|+++||.+.++.
T Consensus         2 ~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~   71 (75)
T 3cjk_B            2 NSVTISVEGMTCNSCVWTIEQQIGKVNGVHHIKVSLEEKNATIIYDPKLQTPKTLQEAIDDMGFDAVIHN   71 (75)
T ss_dssp             EEEEEEECCCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHHTTCCEEEEE
T ss_pred             cEEEEEECCccCHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCceEeec
Confidence            4556777899999999999999999999999999999999999753   678999999999999988754

>2l3m_A Copper-ION-binding protein; structural genomics, center for structural genomics of infec diseases, csgid, metal binding protein; NMR {Bacillus anthracis}

Probab=99.08  E-value=7.9e-10  Score=78.45  Aligned_cols=63  Identities=21%  Similarity=0.201  Sum_probs=56.3

Q ss_pred             EEEEeeecCCchhHHHHHHHhHcCCCCeeEEEEeCCCCEEEEEe---cCCHHHHHHHHHHcCCceE
Q 018608            4 TLSLVLYSFSSKLKASIFLNWVLFIFGVYTTKIDLRQHKVVVKG---DVAAETLIGKLEKNGKHAE   66 (353)
Q Consensus         4 vl~V~L~CmsC~~CA~kVkKaLskIeGVesVeVDLe~qkVTVtG---~VDp~~LlkaIkKtGK~Ae   66 (353)
                      .+.+.+..|+|.+|+..|+++|.+++||..+.+|+..++++|..   .++.+.|+++|+++||.++
T Consensus         6 ~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~   71 (71)
T 2l3m_A            6 QLTLQVEGMSCGHCVNAIESSVKELNGVEQVKVQLAEGTVEVTIDSSVVTLKDIVAVIEDQGYDVQ   71 (71)
T ss_dssp             EEEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEEETTTSCHHHHHHHHHHTTCEEC
T ss_pred             EEEEEECCccCHHHHHHHHHHHHcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCCCC
Confidence            45566789999999999999999999999999999999999974   4688999999999999763

>1fvq_A Copper-transporting ATPase; APO-CCC2A, hydrolase; NMR {Saccharomyces cerevisiae} SCOP: d.58.17.1 PDB: 1fvs_A 2ggp_B

Probab=99.07  E-value=4.8e-10  Score=79.56  Aligned_cols=66  Identities=17%  Similarity=0.203  Sum_probs=58.6

Q ss_pred             EEEeeecCCchhHHHHHHHhHcCCCCeeEEEEeCCCCEEEEEe--cCCHHHHHHHHHHcCCceEECCC
Q 018608            5 LSLVLYSFSSKLKASIFLNWVLFIFGVYTTKIDLRQHKVVVKG--DVAAETLIGKLEKNGKHAELWPE   70 (353)
Q Consensus         5 l~V~L~CmsC~~CA~kVkKaLskIeGVesVeVDLe~qkVTVtG--~VDp~~LlkaIkKtGK~AeL~~~   70 (353)
                      +.+.+..|+|.+|+..|+++|.+++||.++.+|+..++++|+.  .++.+.|+++|+++||.+.+|..
T Consensus         4 ~~~~v~gm~C~~c~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~i~~~i~~~G~~~~~~~~   71 (72)
T 1fvq_A            4 VILAVHGMTCSACTNTINTQLRALKGVTKCDISLVTNECQVTYDNEVTADSIKEIIEDCGFDCEILRD   71 (72)
T ss_dssp             EEEEECSCCSHHHHHHHHHHHHTSSSEEEECCBTTTTEEEEEECTTSCHHHHHHHHHHHTCCEEEEEC
T ss_pred             EEEEECCeecHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCHHHHHHHHHHCCCceEEccC
Confidence            3445678999999999999999999999999999999999985  46789999999999999988753

>1cpz_A Protein (COPZ); copper chaperone, metal transport, gene regulation; NMR {Enterococcus hirae} SCOP: d.58.17.1

Probab=99.06  E-value=7e-10  Score=77.63  Aligned_cols=62  Identities=27%  Similarity=0.261  Sum_probs=56.1

Q ss_pred             EeeecCCchhHHHHHHHhHcCCCCeeEEEEeCCCCEEEEEec---CCHHHHHHHHHHcCCceEEC
Q 018608            7 LVLYSFSSKLKASIFLNWVLFIFGVYTTKIDLRQHKVVVKGD---VAAETLIGKLEKNGKHAELW   68 (353)
Q Consensus         7 V~L~CmsC~~CA~kVkKaLskIeGVesVeVDLe~qkVTVtG~---VDp~~LlkaIkKtGK~AeL~   68 (353)
                      +.+..|+|.+|+..|+++|.+++||.++.+|+..++++|..+   ++.+.|+++|+++||.++++
T Consensus         4 ~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~~   68 (68)
T 1cpz_A            4 FSVKGMSCNHCVARIEEAVGRISGVKKVKVQLKKEKAVVKFDEANVQATEICQAINELGYQAEVI   68 (68)
T ss_dssp             EEESCCCSSSHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHTTSSCEEEC
T ss_pred             EEECCeeCHHHHHHHHHHHHcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCCcccC
Confidence            456789999999999999999999999999999999999864   68899999999999998864

>1osd_A MERP, hypothetical protein MERP; mercury resistance, metal binding protein, perisplasm, structural genomics; 2.00A {Cupriavidus metallidurans} SCOP: d.58.17.1 PDB: 1afi_A 1afj_A 2hqi_A

Probab=99.06  E-value=1.1e-09  Score=77.62  Aligned_cols=65  Identities=14%  Similarity=0.140  Sum_probs=57.9

Q ss_pred             EEEEeeecCCchhHHHHHHHhHcCCCCeeEEEEeCCCCEEEEEec---CCHHHHHHHHHHcCCceEEC
Q 018608            4 TLSLVLYSFSSKLKASIFLNWVLFIFGVYTTKIDLRQHKVVVKGD---VAAETLIGKLEKNGKHAELW   68 (353)
Q Consensus         4 vl~V~L~CmsC~~CA~kVkKaLskIeGVesVeVDLe~qkVTVtG~---VDp~~LlkaIkKtGK~AeL~   68 (353)
                      .+.+.+..|+|.+|+..|+++|.+++||.++.+|+..++++|..+   ++.+.|+++|+++||.+.+.
T Consensus         4 ~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~~   71 (72)
T 1osd_A            4 TVTLSVPGMTCSACPITVKKAISKVEGVSKVDVTFETRQAVVTFDDAKTSVQKLTKATADAGYPSSVK   71 (72)
T ss_dssp             EEEEECTTCCSTTHHHHHHHHHHTSTTEEEEEEETTTTEEEEEEETTTCCHHHHHHHHHHTTCCCEEC
T ss_pred             EEEEEECCeEcHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHhcCCCeEec
Confidence            345667889999999999999999999999999999999999753   68899999999999998764

>1q8l_A Copper-transporting ATPase 1; metal binding protein; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 1s6o_A 1s6u_A

Probab=99.04  E-value=7.9e-10  Score=82.91  Aligned_cols=67  Identities=15%  Similarity=0.145  Sum_probs=60.2

Q ss_pred             EEEEeeecCCchhHHHHHHHhHcCCCCeeEEEEeCCCCEEEEEec---CCHHHHHHHHHHcCCceEECCC
Q 018608            4 TLSLVLYSFSSKLKASIFLNWVLFIFGVYTTKIDLRQHKVVVKGD---VAAETLIGKLEKNGKHAELWPE   70 (353)
Q Consensus         4 vl~V~L~CmsC~~CA~kVkKaLskIeGVesVeVDLe~qkVTVtG~---VDp~~LlkaIkKtGK~AeL~~~   70 (353)
                      .+.+.+..|+|.+|+..|+++|.+++||.+++||+..++++|+.+   ++...|+++|+++||.+.++..
T Consensus        10 ~~~~~v~gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~~   79 (84)
T 1q8l_A           10 VLKMKVEGMTCHSCTSTIEGKIGKLQGVQRIKVSLDNQEATIVYQPHLISVEEMKKQIEAMGFPAFVKKQ   79 (84)
T ss_dssp             EEEEEECCTTTCSSCHHHHHHHHTCTTEEEEEECSTTTEEEEEECTTTCCHHHHHHHHHHTTCCEECSCC
T ss_pred             EEEEEECCcccHHHHHHHHHHHHcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCceEecCC
Confidence            455667889999999999999999999999999999999999863   6889999999999999988775

>2kt2_A Mercuric reductase; nmera, MERA, HMA domain, mercuric resist metal-binding, oxidoreductase; NMR {Pseudomonas aeruginosa} PDB: 2kt3_A

Probab=99.01  E-value=9.8e-10  Score=77.78  Aligned_cols=62  Identities=13%  Similarity=0.064  Sum_probs=56.0

Q ss_pred             EeeecCCchhHHHHHHHhHcCCCCeeEEEEeCCCCEEEEEec--CCHHHHHHHHHHcCCceEEC
Q 018608            7 LVLYSFSSKLKASIFLNWVLFIFGVYTTKIDLRQHKVVVKGD--VAAETLIGKLEKNGKHAELW   68 (353)
Q Consensus         7 V~L~CmsC~~CA~kVkKaLskIeGVesVeVDLe~qkVTVtG~--VDp~~LlkaIkKtGK~AeL~   68 (353)
                      +.+..|+|.+|+.+|+++|.+++||.++.||+..++++|..+  ++.+.|+++|+++||.+.+.
T Consensus         4 ~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~i~~~i~~~Gy~~~~~   67 (69)
T 2kt2_A            4 LKITGMTCDSCAAHVKEALEKVPGVQSALVSYPKGTAQLAIVPGTSPDALTAAVAGLGYKATLA   67 (69)
T ss_dssp             EEEESSCSTHHHHHHHHHHHHSTTEEEEEEETTTTEEEEEECTTSCHHHHHHHHHTTTSEEECC
T ss_pred             EEECCcccHHHHHHHHHHHHcCCCeeEEEEEccCCEEEEEECCCCCHHHHHHHHHHCCCceEeC
Confidence            456899999999999999999999999999999999999753  68899999999999998764

>2qif_A Copper chaperone COPZ; tetranuclear Cu(I) cluster; 1.50A {Bacillus subtilis} SCOP: d.58.17.1 PDB: 3i9z_A 1k0v_A 1p8g_A

Probab=99.01  E-value=2.1e-09  Score=74.18  Aligned_cols=61  Identities=20%  Similarity=0.163  Sum_probs=55.0

Q ss_pred             EEEeeecCCchhHHHHHHHhHcCCCCeeEEEEeCCCCEEEEEe---cCCHHHHHHHHHHcCCce
Q 018608            5 LSLVLYSFSSKLKASIFLNWVLFIFGVYTTKIDLRQHKVVVKG---DVAAETLIGKLEKNGKHA   65 (353)
Q Consensus         5 l~V~L~CmsC~~CA~kVkKaLskIeGVesVeVDLe~qkVTVtG---~VDp~~LlkaIkKtGK~A   65 (353)
                      +.+.+..|+|.+|+..|.++|.+++||.++.+|+..++++|..   .++.+.|+++|+++||.+
T Consensus         4 ~~~~v~gm~C~~c~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~   67 (69)
T 2qif_A            4 KTLQVEGMSCQHCVKAVETSVGELDGVSAVHVNLEAGKVDVSFDADKVSVKDIADAIEDQGYDV   67 (69)
T ss_dssp             EEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHHTTCEE
T ss_pred             EEEEECCcccHHHHHHHHHHHhcCCCeeEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCCc
Confidence            3456789999999999999999999999999999999999974   468899999999999975

>2k2p_A Uncharacterized protein ATU1203; putative metal-binding domain ATU1203, ontario centre for ST proteomics, structural genomics; NMR {Agrobacterium tumefaciens str}

Probab=99.01  E-value=3.9e-10  Score=87.17  Aligned_cols=61  Identities=16%  Similarity=0.092  Sum_probs=56.7

Q ss_pred             EEEeeecCCchhHHHHHHHhHcCCCCeeEEEEeCCCCEEEEEecCCHHHHHHHHHHcCCce
Q 018608            5 LSLVLYSFSSKLKASIFLNWVLFIFGVYTTKIDLRQHKVVVKGDVAAETLIGKLEKNGKHA   65 (353)
Q Consensus         5 l~V~L~CmsC~~CA~kVkKaLskIeGVesVeVDLe~qkVTVtG~VDp~~LlkaIkKtGK~A   65 (353)
                      +.+.+..|+|..|+.+|+++|.+++||.+++||+..++++|+..++.+.|+++|+++||.+
T Consensus        24 ~~l~V~Gm~C~~C~~~Ie~aL~~~~GV~~v~v~l~~~~~~V~~~~~~~~i~~~i~~~Gy~~   84 (85)
T 2k2p_A           24 LSFHVEDMTCGHCAGVIKGAIEKTVPGAAVHADPASRTVVVGGVSDAAHIAEIITAAGYTP   84 (85)
T ss_dssp             EEEECTTCCHHHHHHHHHHHHHHHSTTCEEEEETTTTEEEEESCCCHHHHHHHHHHTTCCC
T ss_pred             EEEEECCCCCHHHHHHHHHHHhcCCCeeEEEEECCCCEEEEEecCCHHHHHHHHHHcCCCC
Confidence            3455678999999999999999999999999999999999999999999999999999975

>2g9o_A Copper-transporting ATPase 1; menkes disease, solution structure, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens} PDB: 2ga7_A

Probab=99.00  E-value=1.5e-09  Score=83.57  Aligned_cols=67  Identities=15%  Similarity=0.081  Sum_probs=60.1

Q ss_pred             EEEeeecCCchhHHHHHHHhHcCCCCeeEEEEeCCCCEEEEEe---cCCHHHHHHHHHHc---CCceEECCCC
Q 018608            5 LSLVLYSFSSKLKASIFLNWVLFIFGVYTTKIDLRQHKVVVKG---DVAAETLIGKLEKN---GKHAELWPES   71 (353)
Q Consensus         5 l~V~L~CmsC~~CA~kVkKaLskIeGVesVeVDLe~qkVTVtG---~VDp~~LlkaIkKt---GK~AeL~~~~   71 (353)
                      +.+.+..|+|..|+.+|+++|.+++||.++.||+..++++|+.   .++.+.|+++|+++   ||.+.++...
T Consensus         5 ~~l~v~Gm~C~~C~~~Ie~~L~~~~GV~~v~v~l~~~~~~V~~~~~~~~~~~i~~~i~~~g~Ggy~~~~~~~~   77 (90)
T 2g9o_A            5 ATFIIDGMHCKSCVSNIESTLSALQYVSSIVVSLENRSAIVVYNASSVTPESLRKAIEAVSPGLYRVSITSEV   77 (90)
T ss_dssp             EEEEEESCCHHHHHHHHHHHHTTCTTEEEEEEETTTTEEEEEECCSSCCTHHHHHHHHTTSTTTCEEECCCCC
T ss_pred             EEEEECCcCCHHHHHHHHHHHHcCCCeeEEEEEccCCEEEEEECCCCCCHHHHHHHHHhccCCCeEEEEeCCC
Confidence            4556689999999999999999999999999999999999975   46888999999999   5999988874

>1opz_A Potential copper-transporting ATPase; mutation, folding, abbab fold, hydrolase; NMR {Bacillus subtilis} SCOP: d.58.17.1 PDB: 1oq3_A 1oq6_A

Probab=99.00  E-value=1.7e-09  Score=76.93  Aligned_cols=65  Identities=17%  Similarity=0.177  Sum_probs=58.1

Q ss_pred             EEEEeeecCCchhHHHHHHHhHcCCCCeeEEEEeCCCCEEEEEe---cCCHHHHHHHHHHcCCceEEC
Q 018608            4 TLSLVLYSFSSKLKASIFLNWVLFIFGVYTTKIDLRQHKVVVKG---DVAAETLIGKLEKNGKHAELW   68 (353)
Q Consensus         4 vl~V~L~CmsC~~CA~kVkKaLskIeGVesVeVDLe~qkVTVtG---~VDp~~LlkaIkKtGK~AeL~   68 (353)
                      .+.+.+..|+|.+|+..|.++|.+++||.++.+|+..++++|.-   .++.+.|+++|+++||.+.+|
T Consensus         7 ~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~~   74 (76)
T 1opz_A            7 EIAMQVSGMTCAACAARIEKGLKRMPGVTDANVNLATETVNVIYDPAETGTAAIQEKIEKLGYHVVIE   74 (76)
T ss_dssp             EEEEEEESCCSTTHHHHHHHHHHTSTTEEEEEEEGGGTEEEEEECTTTCCHHHHHHHHHHHTCEEECC
T ss_pred             EEEEEECCcccHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHCCCceecC
Confidence            34566788999999999999999999999999999999999974   468899999999999998876

>1mwy_A ZNTA; open-faced beta-sandwich fold, beta-alpha-beta-BETA-alpha- beta, hydrolase; NMR {Escherichia coli} SCOP: d.58.17.1 PDB: 1mwz_A

Probab=99.00  E-value=3.2e-09  Score=76.56  Aligned_cols=64  Identities=20%  Similarity=0.119  Sum_probs=56.2

Q ss_pred             EEEeeecCCchhHHHHHHHhHcCCCCeeEEEEeCCCCEEEEEecC-CHHHHHHHHHHcCCceEEC
Q 018608            5 LSLVLYSFSSKLKASIFLNWVLFIFGVYTTKIDLRQHKVVVKGDV-AAETLIGKLEKNGKHAELW   68 (353)
Q Consensus         5 l~V~L~CmsC~~CA~kVkKaLskIeGVesVeVDLe~qkVTVtG~V-Dp~~LlkaIkKtGK~AeL~   68 (353)
                      +.+.+..|+|.+|+..|+++|.+++||.++.||+..++++|+.+. ..+.|+++|+++||.+...
T Consensus         5 ~~~~v~gm~C~~C~~~ie~~l~~~~gV~~~~v~~~~~~~~v~~~~~~~~~i~~~i~~~Gy~~~~~   69 (73)
T 1mwy_A            5 YSWKVSGMDCAACARKVENAVRQLAGVNQVQVLFATEKLVVDADNDIRAQVESALQKAGYSLRDE   69 (73)
T ss_dssp             EEEEEESCCSTTHHHHHHHHHHTSSSEEEEEEETTTTEEEEEESSCCHHHHHHHHHHHTCEEEEC
T ss_pred             EEEEECCcCCHHHHHHHHHHHhcCCCeeEEEEEecCCEEEEEECCCCHHHHHHHHHHcCCccccc
Confidence            456678999999999999999999999999999999999998653 3678999999999998753

>1yg0_A COP associated protein; open-faced beta-sandwich, missing C-terminal beta-sheet, Met transport; NMR {Helicobacter pylori}

Probab=98.99  E-value=1.8e-09  Score=75.04  Aligned_cols=60  Identities=18%  Similarity=0.191  Sum_probs=53.6

Q ss_pred             EEeeecCCchhHHHHHHHhHcCCCCeeEEEEeCCCCEEEEEec--CCHHHHHHHHHHcCCce
Q 018608            6 SLVLYSFSSKLKASIFLNWVLFIFGVYTTKIDLRQHKVVVKGD--VAAETLIGKLEKNGKHA   65 (353)
Q Consensus         6 ~V~L~CmsC~~CA~kVkKaLskIeGVesVeVDLe~qkVTVtG~--VDp~~LlkaIkKtGK~A   65 (353)
                      .+.+..|+|.+|+..|+++|.+++||.++.+|+..++++|..+  ++.+.|+++|+++||.+
T Consensus         4 ~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~i~~~i~~~G~~~   65 (66)
T 1yg0_A            4 TFQVPSITCNHCVDKIEKFVGEIEGVSFIDVSVEKKSVVVEFDAPATQDLIKEALLDAGQEV   65 (66)
T ss_dssp             EECCTTCSCSHHHHHHHHHHTTSSSEEEEEEETTTTEEEEEECTTCCHHHHHHHHHHHTCCC
T ss_pred             EEEECCcccHHHHHHHHHHHhcCCCceEEEEEcCCCEEEEEECCCCCHHHHHHHHHHcCCCc
Confidence            3446789999999999999999999999999999999999754  57889999999999975

>1qup_A Superoxide dismutase 1 copper chaperone; two domains, beta-alpha-beta-BETA-alpha-beta and beta barrel; 1.80A {Saccharomyces cerevisiae} SCOP: b.1.8.1 d.58.17.1

Probab=98.99  E-value=1.1e-09  Score=100.32  Aligned_cols=66  Identities=20%  Similarity=0.225  Sum_probs=60.4

Q ss_pred             EEEEEeeecCCchhHHHHHHHhHcCCCCeeEEEEeCCCCEEEEEecCCHHHHHHHHHHcCCceEECCCC
Q 018608            3 YTLSLVLYSFSSKLKASIFLNWVLFIFGVYTTKIDLRQHKVVVKGDVAAETLIGKLEKNGKHAELWPES   71 (353)
Q Consensus         3 ~vl~V~L~CmsC~~CA~kVkKaLskIeGVesVeVDLe~qkVTVtG~VDp~~LlkaIkKtGK~AeL~~~~   71 (353)
                      ++|+|  . |+|.+|+.+|+++|++++||.+++||+..++++|++.++.+.|+++|+++||.++++...
T Consensus         8 ~~l~V--~-MtC~~Ca~~IekaL~~l~GV~~v~Vnl~~~~v~V~~~~~~~~I~~aI~~~Gy~a~~~~~~   73 (222)
T 1qup_A            8 ATYAI--P-MHCENCVNDIKACLKNVPGINSLNFDIEQQIMSVESSVAPSTIINTLRNCGKDAIIRGAG   73 (222)
T ss_dssp             EEEEC--C-CCSTTHHHHHHHHHTTCTTEEEEEEETTTTEEEEEESSCHHHHHHHHHHTTCCCEEECCS
T ss_pred             EEEEE--c-cccHHHHHHHHHHHhcCCCeeEEEEEcCCCEEEEeccCCHHHHHHHHHHcCCccccccCC
Confidence            34555  4 889999999999999999999999999999999999999999999999999999998764

>2kyz_A Heavy metal binding protein; structural genomics, PSI-biology, protein structure initiative, joint for structural genomics, JCSG; NMR {Thermotoga maritima}

Probab=98.99  E-value=3.6e-10  Score=80.79  Aligned_cols=64  Identities=22%  Similarity=0.249  Sum_probs=55.8

Q ss_pred             CeEEEEEeeecCCchhHHHHHHHhHcCCCCeeEEEEeCCCCEEEEEecCCHHHHHHHHHHcCCceEEC
Q 018608            1 MFYTLSLVLYSFSSKLKASIFLNWVLFIFGVYTTKIDLRQHKVVVKGDVAAETLIGKLEKNGKHAELW   68 (353)
Q Consensus         1 ~~~vl~V~L~CmsC~~CA~kVkKaLskIeGVesVeVDLe~qkVTVtG~VDp~~LlkaIkKtGK~AeL~   68 (353)
                      |-++|.  +..|+|.+|+.+|+++|.++ ||.++++|+..++++|..+.+ +.|+++|+++||.+.++
T Consensus         1 m~~~~~--v~gm~C~~C~~~i~~~l~~~-gv~~~~v~~~~~~~~v~~~~~-~~i~~~i~~~Gy~~~~~   64 (67)
T 2kyz_A            1 MRYVLY--VPDISCNHCKMRISKALEEL-GVKNYEVSVEEKKVVVETENL-DSVLKKLEEIDYPVESY   64 (67)
T ss_dssp             CEEEEE--CGGGGSHHHHHHHHHHHHHH-TCSEEEEETTTTEEEEECSCH-HHHHHHHHTTTCCCCBC
T ss_pred             CeEEEE--ECCcCcHHHHHHHHHHHHHc-CCeEEEEECCCCEEEEEECCH-HHHHHHHHHcCCceeeE
Confidence            444444  56899999999999999999 999999999999999988766 88999999999987643

>1yjr_A Copper-transporting ATPase 1; metallochaperone, protein-protein interaction, copper(I), metal homeostasis, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 1yjt_A 1yju_A 1yjv_A

Probab=98.98  E-value=2.6e-09  Score=76.28  Aligned_cols=65  Identities=18%  Similarity=0.190  Sum_probs=57.4

Q ss_pred             EEEeeecCCchhHHHHHHHhHcCCCCeeEEEEeCCCCEEEEEec---CCHHHHHHHHHHcCCceEECC
Q 018608            5 LSLVLYSFSSKLKASIFLNWVLFIFGVYTTKIDLRQHKVVVKGD---VAAETLIGKLEKNGKHAELWP   69 (353)
Q Consensus         5 l~V~L~CmsC~~CA~kVkKaLskIeGVesVeVDLe~qkVTVtG~---VDp~~LlkaIkKtGK~AeL~~   69 (353)
                      +.+.+..|+|.+|+..|+++|.+++||.++.+|+..++++|..+   ++...|+++|+++||.+.+..
T Consensus         6 ~~~~v~gm~C~~c~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~~~   73 (75)
T 1yjr_A            6 LELVVRGMTCASCVHKIESSLTKHRGILYCSVALATNKAHIKYDPEIIGPRDIIHTIESLGFEPSLVK   73 (75)
T ss_dssp             EEEEEETCCTTTHHHHHHHHHTTSTTEEEEEEETTTTEEEEEECTTTTHHHHHHHHHHHHHCEEEESS
T ss_pred             EEEEECCcccHHHHHHHHHHHHcCCCEEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCCceeec
Confidence            44567899999999999999999999999999999999999864   567889999999999987654

>1kvi_A Copper-transporting ATPase 1; menkes, Cu-protein, hydrolase; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 1kvj_A

Probab=98.97  E-value=1.5e-09  Score=79.15  Aligned_cols=67  Identities=13%  Similarity=0.144  Sum_probs=59.3

Q ss_pred             EEEEeeecCCchhHHHHHHHhHcCCCCeeEEEEeCCCCEEEEEec---CCHHHHHHHHHHcCCceEECCC
Q 018608            4 TLSLVLYSFSSKLKASIFLNWVLFIFGVYTTKIDLRQHKVVVKGD---VAAETLIGKLEKNGKHAELWPE   70 (353)
Q Consensus         4 vl~V~L~CmsC~~CA~kVkKaLskIeGVesVeVDLe~qkVTVtG~---VDp~~LlkaIkKtGK~AeL~~~   70 (353)
                      .+.+.+..|+|.+|+..|+++|.+++||.++.+|+..++++|+.+   ++.+.|+++|+++||.+.+...
T Consensus         9 ~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~~   78 (79)
T 1kvi_A            9 SVTISVEGMTCNSCVWTIEQQIGKVNGVHHIKVSLEEKNATIIYDPKLQTPKTLQEAIDDMGFDAVIHNP   78 (79)
T ss_dssp             EEEEEECCCCSTTTHHHHHHHHHHSSSCCCEEEEGGGTEEEEEECTTTCCHHHHHHHHHHHCCCEEECCC
T ss_pred             EEEEEECCccCHHHHHHHHHHHhcCCCeEEEEEEccCCEEEEEECCCCCCHHHHHHHHHHCCCceEecCC
Confidence            455667889999999999999999999999999999999999753   6789999999999999987653

>1y3j_A Copper-transporting ATPase 1; ferrodoxin-like fold, beta-alpha-beta-BETA-alpha-beta structure, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 1y3k_A

Probab=98.94  E-value=2e-09  Score=78.32  Aligned_cols=66  Identities=11%  Similarity=0.056  Sum_probs=59.1

Q ss_pred             EEEeeecCCchhHHHHHHHhHcCCCCeeEEEEeCCCCEEEEEec---CCHHHHHHHHHHcCCceEECCC
Q 018608            5 LSLVLYSFSSKLKASIFLNWVLFIFGVYTTKIDLRQHKVVVKGD---VAAETLIGKLEKNGKHAELWPE   70 (353)
Q Consensus         5 l~V~L~CmsC~~CA~kVkKaLskIeGVesVeVDLe~qkVTVtG~---VDp~~LlkaIkKtGK~AeL~~~   70 (353)
                      +.+.+..|+|.+|+..|+++|.+++||.++.+|+..++++|+..   ++...|+++|+++||.+.++..
T Consensus         5 ~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~~   73 (77)
T 1y3j_A            5 CYIQVTGMTCASCVANIERNLRREEGIYSILVALMAGKAEVRYNPAVIQPPMIAEFIRELGFGATVIEN   73 (77)
T ss_dssp             EEEEESCGGGCSHHHHHHHHHTTSSSEEECCCBTTTTBEEEEECTTTSCHHHHHHHHHHHTSCEEEESC
T ss_pred             EEEEECCeeCHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCceEECCc
Confidence            45677899999999999999999999999999999999999753   6788999999999999987653

>2ldi_A Zinc-transporting ATPase; metal homeostasis, metallochaperones, hydrolase; NMR {Synechocystis SP}

Probab=98.93  E-value=2.9e-09  Score=74.29  Aligned_cols=62  Identities=13%  Similarity=0.077  Sum_probs=55.3

Q ss_pred             EEEeeecCCchhHHHHHHHhHcCCCCeeEEEEeCCCCEEEEEe---cCCHHHHHHHHHHcCCceE
Q 018608            5 LSLVLYSFSSKLKASIFLNWVLFIFGVYTTKIDLRQHKVVVKG---DVAAETLIGKLEKNGKHAE   66 (353)
Q Consensus         5 l~V~L~CmsC~~CA~kVkKaLskIeGVesVeVDLe~qkVTVtG---~VDp~~LlkaIkKtGK~Ae   66 (353)
                      +.+.+..|+|.+|+..|+++|.+++||.++.+|+..++++|..   .++.+.|+++|+++||.++
T Consensus         5 ~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~   69 (71)
T 2ldi_A            5 QQMQVGGMRCAACASSIERALERLKGVAEASVTVATGRLTVTYDPKQVSEITIQERIAALGYTLA   69 (71)
T ss_dssp             EEEEEETCTTSGGGHHHHTGGGGCSSEEEEEEETTTTEEEEEECTTTCCTHHHHHHHHTTTCEEE
T ss_pred             EEEEECCccCHHHHHHHHHHHhcCCCeeEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCCcc
Confidence            4456679999999999999999999999999999999999974   4678899999999999875

>1jww_A Potential copper-transporting ATPase; beta-alpha-beta-BETA-alpha-beta, hydrolase; NMR {Bacillus subtilis} SCOP: d.58.17.1 PDB: 2voy_A 1kqk_A

Probab=98.90  E-value=5.1e-09  Score=75.83  Aligned_cols=68  Identities=16%  Similarity=0.133  Sum_probs=60.5

Q ss_pred             EEEEeeecCCchhHHHHHHHhHcCCCCeeEEEEeCCCCEEEEEe---cCCHHHHHHHHHHcCCceEECCCC
Q 018608            4 TLSLVLYSFSSKLKASIFLNWVLFIFGVYTTKIDLRQHKVVVKG---DVAAETLIGKLEKNGKHAELWPES   71 (353)
Q Consensus         4 vl~V~L~CmsC~~CA~kVkKaLskIeGVesVeVDLe~qkVTVtG---~VDp~~LlkaIkKtGK~AeL~~~~   71 (353)
                      .+.+.+..|+|.+|+..|.++|.+++||.++.+|+..++++|.-   .++...|+++|+++||.+.++...
T Consensus         4 ~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~~~~~   74 (80)
T 1jww_A            4 KAEFDIEGMTCAACANRIEKRLNKIEGVANAPVNFALETVTVEYNPKEASVSDLKEAVDKLGYKLKLKGEQ   74 (80)
T ss_dssp             EEEEEEESCCCHHHHHHHHHHHHTSTTEEECCCCSSSSEEEEEECTTTCCHHHHHHHHHHHTSEEEECCSS
T ss_pred             EEEEEECCccCHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCeEEecCcc
Confidence            34567789999999999999999999999999999999999974   468899999999999999987653

>2ew9_A Copper-transporting ATPase 2; copper trafficking, ferrodoxin-like fold, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens}

Probab=98.89  E-value=5.1e-09  Score=84.71  Aligned_cols=64  Identities=20%  Similarity=0.217  Sum_probs=58.2

Q ss_pred             EEEeeecCCchhHHHHHHHhHcCCCCeeEEEEeCCCCEEEEEec---CCHHHHHHHHHHcCCceEEC
Q 018608            5 LSLVLYSFSSKLKASIFLNWVLFIFGVYTTKIDLRQHKVVVKGD---VAAETLIGKLEKNGKHAELW   68 (353)
Q Consensus         5 l~V~L~CmsC~~CA~kVkKaLskIeGVesVeVDLe~qkVTVtG~---VDp~~LlkaIkKtGK~AeL~   68 (353)
                      +.+.+..|+|.+|+.+|+++|.+++||.+++||+..++++|+.+   ++...|+++|+++||.+.++
T Consensus        82 ~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~  148 (149)
T 2ew9_A           82 IELTITGMTCASCVHNIESKLTRTNGITYASVALATSKALVKFDPEIIGPRDIIKIIEEIGFHASLA  148 (149)
T ss_dssp             EEEEEESCCSHHHHHHHHHHHHHSSSCCEEEEETTTTEEEEECCTTTSCHHHHHHHHHHHTCEEECC
T ss_pred             eEEEEEeccCHHHHHHHHHHHhcCCCeEEEEEEcCCCEEEEEECCCCCCHHHHHHHHHhCCCceEec
Confidence            45667899999999999999999999999999999999999754   68899999999999998765

>1p6t_A Potential copper-transporting ATPase; COPA, P-type ATPase, water-soluble region, beta-alpha-beta- beta-alpha-beta fold; NMR {Bacillus subtilis} SCOP: d.58.17.1 d.58.17.1 PDB: 2rml_A

Probab=98.87  E-value=6e-09  Score=84.96  Aligned_cols=67  Identities=16%  Similarity=0.134  Sum_probs=60.5

Q ss_pred             EEEeeecCCchhHHHHHHHhHcCCCCeeEEEEeCCCCEEEEEe---cCCHHHHHHHHHHcCCceEECCCC
Q 018608            5 LSLVLYSFSSKLKASIFLNWVLFIFGVYTTKIDLRQHKVVVKG---DVAAETLIGKLEKNGKHAELWPES   71 (353)
Q Consensus         5 l~V~L~CmsC~~CA~kVkKaLskIeGVesVeVDLe~qkVTVtG---~VDp~~LlkaIkKtGK~AeL~~~~   71 (353)
                      +.+.+..|+|.+|+.+|+++|.+++||.+++||+..++++|+-   .++...|+++|+++||.+.++...
T Consensus        76 ~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~~~  145 (151)
T 1p6t_A           76 AEFDIEGMTCAACANRIEKRLNKIEGVANAPVNFALETVTVEYNPKEASVSDLKEAVDKLGYKLKLKGEQ  145 (151)
T ss_dssp             EEEEESSCCSSSHHHHHHHHHTTSSSEEECCEETTTTEEEEEECTTTCCHHHHHHHHHHHTCCEEESCSS
T ss_pred             cEEEecCCCCHHHHHHHHHHHhcCCCceEEEEEccCCEEEEEECCCCCCHHHHHHHHHHcCCCeEEcCcc
Confidence            4566789999999999999999999999999999999999984   578999999999999999987653

>1jk9_B CCS, copper chaperone for superoxide dismutase; protein-protein complex, heterodimer, metallochaperone, amyotrophic lateral sclerosis; 2.90A {Saccharomyces cerevisiae} SCOP: b.1.8.1 d.58.17.1

Probab=98.87  E-value=3.4e-09  Score=98.79  Aligned_cols=64  Identities=20%  Similarity=0.241  Sum_probs=58.8

Q ss_pred             EEEEeeecCCchhHHHHHHHhHcCCCCeeEEEEeCCCCEEEEEecCCHHHHHHHHHHcCCceEECCC
Q 018608            4 TLSLVLYSFSSKLKASIFLNWVLFIFGVYTTKIDLRQHKVVVKGDVAAETLIGKLEKNGKHAELWPE   70 (353)
Q Consensus         4 vl~V~L~CmsC~~CA~kVkKaLskIeGVesVeVDLe~qkVTVtG~VDp~~LlkaIkKtGK~AeL~~~   70 (353)
                      +|+|  . |+|.+|+.+|+++|.+++||.+++||+..++++|.+.++++.|+++|+++||.++++..
T Consensus        10 ~l~V--~-MtC~~Ca~~IekaL~~l~GV~~v~Vnl~~~~v~V~~~~~~~~I~~aIe~~Gy~a~~~~~   73 (249)
T 1jk9_B           10 TYAI--P-MHCENCVNDIKACLKNVPGINSLNFDIEQQIMSVESSVAPSTIINTLRNCGKDAIIRGA   73 (249)
T ss_dssp             EEEC--C-CCSSSHHHHHHHHHTTCTTEEEEEEETTTTEEEEEESSCHHHHHHHHHTTTCCCEEEEE
T ss_pred             EEEE--e-eccHHHHHHHHHHHhccCCeeEEEEEcCCCeEEEecCCCHHHHHHHHHHhCCCcccccC
Confidence            4554  4 88889999999999999999999999999999999999999999999999999988765

>2aj0_A Probable cadmium-transporting ATPase; ferrodoxin-like fold, beta-alpha-beta-BETA-alpha-beta, metal binding protein, hydrolase; NMR {Listeria monocytogenes} PDB: 2aj1_A

Probab=98.86  E-value=2e-09  Score=77.45  Aligned_cols=63  Identities=24%  Similarity=0.251  Sum_probs=53.7

Q ss_pred             CeEEEEEeeecCCchhHHHHHHHhHcCCCCeeEEEEeCCCCEEEEEecCCHHHHHHHHHHcCCceEE
Q 018608            1 MFYTLSLVLYSFSSKLKASIFLNWVLFIFGVYTTKIDLRQHKVVVKGDVAAETLIGKLEKNGKHAEL   67 (353)
Q Consensus         1 ~~~vl~V~L~CmsC~~CA~kVkKaLskIeGVesVeVDLe~qkVTVtG~VDp~~LlkaIkKtGK~AeL   67 (353)
                      |...+.+.+..|+|.+|+..|+++|.+++||.++.||+..++++|....+    +++|+++||.+.+
T Consensus         1 m~~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~----~~~i~~~Gy~~~~   63 (71)
T 2aj0_A            1 MAEKTVYRVDGLSCTNCAAKFERNVKEIEGVTEAIVNFGASKITVTGEAS----IQQVEQAGAFEHL   63 (71)
T ss_dssp             CCCEEEEEEESCCCHHHHHHHHHHHHHSTTEEEEEECCSSEEEEEEESCC----HHHHHHHHTTTTC
T ss_pred             CCeEEEEEECCcccHHHHHHHHHHHHcCCCeEEEEEECCCCEEEEEecCc----HHHHHHhCCCccc
Confidence            54556667789999999999999999999999999999999999998765    5577888987543

>2kkh_A Putative heavy metal transporter; zinc transport, metal binding, metal selectivity, ferredoxin fold, ATP-binding, hydrolase; NMR {Arabidopsis thaliana}

Probab=98.85  E-value=1.1e-08  Score=78.61  Aligned_cols=68  Identities=13%  Similarity=0.117  Sum_probs=60.4

Q ss_pred             EEEEeeecCCchhHHHHHHHhHcCCCCeeEEEEeCCCCEEEEEec---CCHHHHHHHHHHcCCceEECCCC
Q 018608            4 TLSLVLYSFSSKLKASIFLNWVLFIFGVYTTKIDLRQHKVVVKGD---VAAETLIGKLEKNGKHAELWPES   71 (353)
Q Consensus         4 vl~V~L~CmsC~~CA~kVkKaLskIeGVesVeVDLe~qkVTVtG~---VDp~~LlkaIkKtGK~AeL~~~~   71 (353)
                      .+.+.+..|+|.+|+..|.++|.+++||..+.||+..++++|...   ++...|+++|+++||.+.++...
T Consensus        17 ~~~~~v~gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~~~   87 (95)
T 2kkh_A           17 KSYFDVLGICCTSEVPIIENILKSLDGVKEYSVIVPSRTVIVVHDSLLISPFQIAKALNEARLEANVRVNG   87 (95)
T ss_dssp             EEEEEETTCCTTTTHHHHHHHHHHSSSEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHHHTCCEEESCCC
T ss_pred             EEEEEECCcCCHHHHHHHHHHHhcCCCeeEEEEEccCCEEEEEECCCCCCHHHHHHHHHHcCCceEEecCC
Confidence            345667889999999999999999999999999999999999864   57889999999999999987764

>2rop_A Copper-transporting ATPase 2; wilson protein, mobility, protein-protein interaction, alternative splicing, ATP-binding, copper transport cytoplasm; NMR {Homo sapiens}

Probab=98.74  E-value=3.2e-08  Score=85.94  Aligned_cols=67  Identities=16%  Similarity=0.139  Sum_probs=59.4

Q ss_pred             EEEEeeecCCchhHHHHHHHhHcCCCCeeEEEEeCCCCEEEEEe---cCCHHHHHHHHHHcCCceEECCC
Q 018608            4 TLSLVLYSFSSKLKASIFLNWVLFIFGVYTTKIDLRQHKVVVKG---DVAAETLIGKLEKNGKHAELWPE   70 (353)
Q Consensus         4 vl~V~L~CmsC~~CA~kVkKaLskIeGVesVeVDLe~qkVTVtG---~VDp~~LlkaIkKtGK~AeL~~~   70 (353)
                      .+.+.+..|+|.+|+..|+++|.+++||.++.||+..++++|+.   .++.+.|+++|+++||.+.++..
T Consensus       123 ~~~l~v~Gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~~  192 (202)
T 2rop_A          123 TTLIAIAGMTCASCVHSIEGMISQLEGVQQISVSLAEGTATVLYNPAVISPEELRAAIEDMGFEASVVSE  192 (202)
T ss_dssp             EEEEEESCCCSTHHHHHHHHHGGGSSSEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHHHTSCEEEC--
T ss_pred             EEEEEECCccCHHHHHHHHHHHHcCCCeEEEEEEccCCEEEEEECCCCCCHHHHHHHHHHcCCceEEcCC
Confidence            35567789999999999999999999999999999999999975   46889999999999999998765

>2ew9_A Copper-transporting ATPase 2; copper trafficking, ferrodoxin-like fold, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens}

Probab=98.66  E-value=9.6e-08  Score=77.18  Aligned_cols=67  Identities=13%  Similarity=0.012  Sum_probs=59.7

Q ss_pred             EEEEEeeecCCchhHHHHHHHhHcCCCCeeEEEEeCCCCEEEEEe---cCCHHHHHHHHHHcCCceEECC
Q 018608            3 YTLSLVLYSFSSKLKASIFLNWVLFIFGVYTTKIDLRQHKVVVKG---DVAAETLIGKLEKNGKHAELWP   69 (353)
Q Consensus         3 ~vl~V~L~CmsC~~CA~kVkKaLskIeGVesVeVDLe~qkVTVtG---~VDp~~LlkaIkKtGK~AeL~~   69 (353)
                      ..+.+.+..|+|.+|+..|+++|.+++||.++.||+..++++|..   .++.+.|+++|+++||.+.++.
T Consensus         4 ~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~~~   73 (149)
T 2ew9_A            4 QKCFLQIKGMTCASCVSNIERNLQKEAGVLSVLVALMAGKAEIKYDPEVIQPLEIAQFIQDLGFEAAVME   73 (149)
T ss_dssp             EEEEEEEECCCSSSHHHHHHHHHHTTSSCCCEEEETTTTEEEEEECTTTCCHHHHHHHHHHHTCEEEECS
T ss_pred             EEEEEEECCeecHHHHHHHHHHHhcCCCcEEEEEEecCCEEEEEEcCCCCCHHHHHHHHhcCCCceEeec
Confidence            455677889999999999999999999999999999999999975   3678899999999999988754

>1p6t_A Potential copper-transporting ATPase; COPA, P-type ATPase, water-soluble region, beta-alpha-beta- beta-alpha-beta fold; NMR {Bacillus subtilis} SCOP: d.58.17.1 d.58.17.1 PDB: 2rml_A

Probab=98.36  E-value=1.5e-06  Score=70.72  Aligned_cols=62  Identities=18%  Similarity=0.204  Sum_probs=54.7

Q ss_pred             EEEEeeecCCchhHHHHHHHhHcCCCCeeEEEEeCCCCEEEEEe---cCCHHHHHHHHHHcCCce
Q 018608            4 TLSLVLYSFSSKLKASIFLNWVLFIFGVYTTKIDLRQHKVVVKG---DVAAETLIGKLEKNGKHA   65 (353)
Q Consensus         4 vl~V~L~CmsC~~CA~kVkKaLskIeGVesVeVDLe~qkVTVtG---~VDp~~LlkaIkKtGK~A   65 (353)
                      .+.+.+..|+|.+|+..|+++|.+++||.++.+++..++++|.-   .++...|.++|+++|+.+
T Consensus         7 ~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~   71 (151)
T 1p6t_A            7 EIAMQVSGMTCAACAARIEKGLKRMPGVTDANVNLATETVNVIYDPAETGTAAIQEKIEKLGYHV   71 (151)
T ss_dssp             EEEEEEESCCSSHHHHHHHHHHTTSSSEEEEEEEGGGTEEEEEECTTTSCHHHHHHHHHHHTCEE
T ss_pred             EEEEEECCCcCHHHHHHHHHHHhcCCCeeEEEEEccCCEEEEEEcCCcCCHHHHHHHHHHcCCcc
Confidence            44566788999999999999999999999999999999999974   357889999999999865

>2rop_A Copper-transporting ATPase 2; wilson protein, mobility, protein-protein interaction, alternative splicing, ATP-binding, copper transport cytoplasm; NMR {Homo sapiens}

Probab=98.34  E-value=9.1e-07  Score=76.79  Aligned_cols=65  Identities=20%  Similarity=0.142  Sum_probs=55.8

Q ss_pred             EEEEeeecCCchhHHHHHHHhHcCCCCeeEEEEeCCCCEEEEEec---CCHHHHHHHHHHc---CCceEEC
Q 018608            4 TLSLVLYSFSSKLKASIFLNWVLFIFGVYTTKIDLRQHKVVVKGD---VAAETLIGKLEKN---GKHAELW   68 (353)
Q Consensus         4 vl~V~L~CmsC~~CA~kVkKaLskIeGVesVeVDLe~qkVTVtG~---VDp~~LlkaIkKt---GK~AeL~   68 (353)
                      .+.+.+..|+|.+|+.+|+++|.+++||.++.||+..++++|...   ++...|+++|+++   |+.+.+.
T Consensus        21 ~~~l~v~Gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~~~gg~~v~~~   91 (202)
T 2rop_A           21 TLQLRIDGMHCKSCVLNIEENIGQLLGVQSIQVSLENKTAQVKYDPSCTSPVALQRAIEALPPGNFKVSLP   91 (202)
T ss_dssp             EEEEEEESGGGSTHHHHHHHHTTSBTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHTTSSSSCSEEEC-
T ss_pred             EEEEEECCeEcHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHhccCCeEEEec
Confidence            456778899999999999999999999999999999999999753   6788999999888   3666543

>3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}

Probab=98.02  E-value=1.1e-05  Score=84.47  Aligned_cols=61  Identities=13%  Similarity=0.125  Sum_probs=56.1

Q ss_pred             EEeeecCCchhHHHHHHHhHcCCCCeeEEEEeCCCCEEEEEe---cCCHHHHHHHHHHcCCceE
Q 018608            6 SLVLYSFSSKLKASIFLNWVLFIFGVYTTKIDLRQHKVVVKG---DVAAETLIGKLEKNGKHAE   66 (353)
Q Consensus         6 ~V~L~CmsC~~CA~kVkKaLskIeGVesVeVDLe~qkVTVtG---~VDp~~LlkaIkKtGK~Ae   66 (353)
                      .+.+.+|+|.+|+.+|+++|.+++||.+++||+..++++|+-   .++.++|+++|++.|+.+.
T Consensus         5 ~l~V~GM~Ca~Ca~~Ie~~L~~~~GV~~v~Vnl~~~~~~V~~d~~~~~~~~i~~ai~~~Gy~~~   68 (723)
T 3j09_A            5 TVRVTGMTCAMCVKSIETAVGSLEGVEEVRVNLATETAFIRFDEKRIDFETIKRVIEDLGYGVV   68 (723)
T ss_dssp             EEEEETCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHHHCCEES
T ss_pred             EEEeCCCCchHHHHHHHHHHhcCCCceEEEEEcCCCEEEEEeCCCcCCHHHHHHHHHhcCCccc
Confidence            455789999999999999999999999999999999999974   4789999999999999975

>3bpd_A Uncharacterized protein; heptamer, Mg+2 ION, PSI-2, NYSGXRC, structural genom protein structure initiative; 2.80A {Archaeoglobus fulgidus dsm 4304} SCOP: d.58.61.1

Probab=88.02  E-value=0.45  Score=39.43  Aligned_cols=47  Identities=21%  Similarity=0.249  Sum_probs=36.2

Q ss_pred             HHHHHhHcCCCCeeEEEE-----eCCCC--EEEEEe-cCCHHHHHHHHHHcCCce
Q 018608           19 SIFLNWVLFIFGVYTTKI-----DLRQH--KVVVKG-DVAAETLIGKLEKNGKHA   65 (353)
Q Consensus        19 ~kVkKaLskIeGVesVeV-----DLe~q--kVTVtG-~VDp~~LlkaIkKtGK~A   65 (353)
                      -.+-+.|.+++||+.|.|     |.+..  +|||+| ++|.+.|.++|++.|-.+
T Consensus        22 vdlA~~l~~~~gV~gVnItV~EvD~eTe~lkItIEG~dIdfd~I~~~IE~~GgvI   76 (100)
T 3bpd_A           22 IVFALKLSELENVDGVNIHLSEIDQATENIKITILGNNLDYEQIKGVIEDMGGVI   76 (100)
T ss_dssp             HHHHHHHHTSTTEEEEEEEEEEECSSEEEEEEEEEEEEECHHHHHHHHHTTTCEE
T ss_pred             HHHHHHHHhCCCcceEEEEEEEeeccccEEEEEEEecCCCHHHHHHHHHHcCCeE
Confidence            457788999999997654     44444  455678 499999999999998654

>2x3d_A SSO6206; unknown function; 2.70A {Sulfolobus solfataricus}

Probab=87.14  E-value=0.72  Score=37.97  Aligned_cols=47  Identities=17%  Similarity=0.252  Sum_probs=36.3

Q ss_pred             HHHHHhHcCCCCeeEEEE-----eCCCC--EEEEEec-CCHHHHHHHHHHcCCce
Q 018608           19 SIFLNWVLFIFGVYTTKI-----DLRQH--KVVVKGD-VAAETLIGKLEKNGKHA   65 (353)
Q Consensus        19 ~kVkKaLskIeGVesVeV-----DLe~q--kVTVtG~-VDp~~LlkaIkKtGK~A   65 (353)
                      -.+-+.|.+++||+.|.+     |.+..  +|||+|+ +|.+.|.++|++.|-.+
T Consensus        21 vd~A~~l~~~~gV~gVnItv~EvD~eTe~lkItIEG~~idfd~I~~~IE~~Gg~I   75 (96)
T 2x3d_A           21 VDLAERISKLDGVEGVNISVTDMDVETMGLMIIIEGTSLNFDDIRKMLEEEGCAI   75 (96)
T ss_dssp             HHHHHHHHTSTTEEEEEEEEEEECSSEEEEEEEEEESSCCHHHHHHHHHHTTCEE
T ss_pred             HHHHHHHHhCCCcceEEEEEEEeeccccEEEEEEEecCCCHHHHHHHHHHcCCeE
Confidence            456788999999987654     44444  4566784 99999999999998654

>2raq_A Conserved protein MTH889; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 3.11A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: d.58.61.1

Probab=85.57  E-value=0.66  Score=38.24  Aligned_cols=47  Identities=21%  Similarity=0.363  Sum_probs=35.3

Q ss_pred             HHHHHhHcCCCCeeEEEE-----eCCCC--EEEEEe-cCCHHHHHHHHHHcCCce
Q 018608           19 SIFLNWVLFIFGVYTTKI-----DLRQH--KVVVKG-DVAAETLIGKLEKNGKHA   65 (353)
Q Consensus        19 ~kVkKaLskIeGVesVeV-----DLe~q--kVTVtG-~VDp~~LlkaIkKtGK~A   65 (353)
                      -.+-+.|.+++||+.|.|     |.+..  +|||.| ++|.+.|.++|++.|-.+
T Consensus        22 ~d~A~~l~~~~gV~gVnItv~EvD~eTe~lkitiEG~~id~d~I~~~IE~~Gg~I   76 (97)
T 2raq_A           22 PEYAKYLSELRGVEGVNITLMEIDKETENIKVTIQGNDLDFDEITRAIESYGGSI   76 (97)
T ss_dssp             HHHHHHHHHSTTCCEEEEEEEEECSSCEEEEEEEECSSCCHHHHHHHHHHTTCEE
T ss_pred             HHHHHHHHhCCCcceEEEEEEEeeccccEEEEEEEecCCCHHHHHHHHHHcCCeE
Confidence            356677888888886654     55554  456678 499999999999998654

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	353
d1qupa2	72	d.58.17.1 (A:2-73) Copper chaperone for superoxide	1e-05
d1fe0a_	66	d.58.17.1 (A:) ATX1 metallochaperone protein (ATOX	1e-05
d1cc8a_	72	d.58.17.1 (A:) ATX1 metallochaperone protein (ATOX	1e-04
d1sb6a_	64	d.58.17.1 (A:) Copper chaperone {Synechocystis sp.	6e-04

>d1qupa2 d.58.17.1 (A:2-73) Copper chaperone for superoxide dismutase, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 72

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Copper chaperone for superoxide dismutase, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 40.9 bits (96), Expect = 1e-05
 Identities = 11/38 (28%), Positives = 18/38 (47%)

Query: 31 VYTTKIDLRQHKVVVKGDVAAETLIGKLEKNGKHAELW 68
          + +   D+ Q  + V+  VA  T+I  L   GK A + 
Sbjct: 33 INSLNFDIEQQIMSVESSVAPSTIINTLRNCGKDAIIR 70

>d1fe0a_ d.58.17.1 (A:) ATX1 metallochaperone protein (ATOX1) {Human (Homo sapiens), HAH1 [TaxId: 9606]} Length = 66

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: ATX1 metallochaperone protein (ATOX1)
species: Human (Homo sapiens), HAH1 [TaxId: 9606]

 Score = 40.6 bits (95), Expect = 1e-05
 Identities = 12/39 (30%), Positives = 19/39 (48%)

Query: 30 GVYTTKIDLRQHKVVVKGDVAAETLIGKLEKNGKHAELW 68
          G     IDL   KV ++ + + +TL+  L+K GK     
Sbjct: 26 GGVKYDIDLPNKKVCIESEHSMDTLLATLKKTGKTVSYL 64

>d1cc8a_ d.58.17.1 (A:) ATX1 metallochaperone protein (ATOX1) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 72

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: ATX1 metallochaperone protein (ATOX1)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 37.4 bits (87), Expect = 1e-04
 Identities = 9/37 (24%), Positives = 16/37 (43%)

Query: 29 FGVYTTKIDLRQHKVVVKGDVAAETLIGKLEKNGKHA 65
            V    I L +  V V   +  + ++ K++K GK  
Sbjct: 30 PDVSKIDISLEKQLVDVYTTLPYDFILEKIKKTGKEV 66

>d1sb6a_ d.58.17.1 (A:) Copper chaperone {Synechocystis sp. pcc 6803, Scatx1 [TaxId: 1148]} Length = 64

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Copper chaperone
species: Synechocystis sp. pcc 6803, Scatx1 [TaxId: 1148]

 Score = 35.7 bits (82), Expect = 6e-04
 Identities = 9/37 (24%), Positives = 14/37 (37%)

Query: 30 GVYTTKIDLRQHKVVVKGDVAAETLIGKLEKNGKHAE 66
             T ++DL   KV +   +  E L   +   G   E
Sbjct: 28 AQATVQVDLTSKKVTITSALGEEQLRTAIASAGHEVE 64

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	353
d1qupa2	72	Copper chaperone for superoxide dismutase, N-termi	99.64
d1fe0a_	66	ATX1 metallochaperone protein (ATOX1) {Human (Homo	99.57
d1cc8a_	72	ATX1 metallochaperone protein (ATOX1) {Baker's yea	99.53
d1sb6a_	64	Copper chaperone {Synechocystis sp. pcc 6803, Scat	99.43
d2ggpb1	72	Copper transporter domain ccc2a {Baker's yeast (Sa	99.4
d1osda_	72	Mercuric ion binding protein MerP {Ralstonia metal	99.37
d1cpza_	68	Copper chaperone {Enterococcus hirae [TaxId: 1354]	99.37
d2aw0a_	72	Menkes copper-transporting ATPase {Human (Homo sap	99.36
d1q8la_	84	Menkes copper-transporting ATPase {Human (Homo sap	99.34
d1kvja_	79	Menkes copper-transporting ATPase {Human (Homo sap	99.32
d2qifa1	69	Copper chaperone {Bacillus subtilis, CopZ [TaxId:	99.27
d1p6ta2	79	Potential copper-translocating P-type ATPase CopA	99.24
d1p6ta1	72	Potential copper-translocating P-type ATPase CopA	99.24
d1mwza_	73	Metal ion-transporting ATPase ZntA, N-terminal dom	99.2
d2raqa1	93	Uncharacterized protein MTH889 {Methanobacterium t	84.92
d3bpda1	91	Uncharacterized protein AF1549 {Archaeoglobus fulg	83.83

>d1qupa2 d.58.17.1 (A:2-73) Copper chaperone for superoxide dismutase, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Copper chaperone for superoxide dismutase, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.64  E-value=2.8e-16  Score=119.32  Aligned_cols=65  Identities=20%  Similarity=0.233  Sum_probs=60.2

Q ss_pred             EEEEEeeecCCchhHHHHHHHhHcCCCCeeEEEEeCCCCEEEEEecCCHHHHHHHHHHcCCceEECCC
Q 018608            3 YTLSLVLYSFSSKLKASIFLNWVLFIFGVYTTKIDLRQHKVVVKGDVAAETLIGKLEKNGKHAELWPE   70 (353)
Q Consensus         3 ~vl~V~L~CmsC~~CA~kVkKaLskIeGVesVeVDLe~qkVTVtG~VDp~~LlkaIkKtGK~AeL~~~   70 (353)
                      ++|+|.   |+|++|+.+|+++|++|+||.+|+|||..++|+|+|.++++.|+++|+++||+|.|++.
T Consensus         8 ~~f~V~---M~C~~C~~~Iek~l~~~~gV~~v~vdl~~~~v~V~~~~~~~~i~~~I~~~G~~A~l~g~   72 (72)
T d1qupa2           8 ATYAIP---MHCENCVNDIKACLKNVPGINSLNFDIEQQIMSVESSVAPSTIINTLRNCGKDAIIRGA   72 (72)
T ss_dssp             EEEECC---CCSTTHHHHHHHHHTTCTTEEEEEEETTTTEEEEEESSCHHHHHHHHHHTTCCCEEECC
T ss_pred             EEEEEc---cCCHHHHHHHHHHHhcCCCeeEEEEECCCCEEEEEeeCCHHHHHHHHHHhCCCEEEecC
Confidence            567774   77777799999999999999999999999999999999999999999999999999874

>d1fe0a_ d.58.17.1 (A:) ATX1 metallochaperone protein (ATOX1) {Human (Homo sapiens), HAH1 [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: ATX1 metallochaperone protein (ATOX1)
species: Human (Homo sapiens), HAH1 [TaxId: 9606]

Probab=99.57  E-value=2.3e-15  Score=112.79  Aligned_cols=63  Identities=24%  Similarity=0.264  Sum_probs=58.2

Q ss_pred             EEEEEeeecCCchhHHHHHHHhHcCCCCeeEEEEeCCCCEEEEEecCCHHHHHHHHHHcCCceEECC
Q 018608            3 YTLSLVLYSFSSKLKASIFLNWVLFIFGVYTTKIDLRQHKVVVKGDVAAETLIGKLEKNGKHAELWP   69 (353)
Q Consensus         3 ~vl~V~L~CmsC~~CA~kVkKaLskIeGVesVeVDLe~qkVTVtG~VDp~~LlkaIkKtGK~AeL~~   69 (353)
                      +.|+|.   |+|.+|+.+|+++|++|+|| +|+||+.+++|+|+|++++++|+++|+++||.|+||+
T Consensus         3 ~ef~V~---M~C~~C~~~I~~aL~~~~gv-~v~v~~~~~~v~V~~~~~~~~i~~~I~~~Gy~a~lig   65 (66)
T d1fe0a_           3 HEFSVD---MTCGGCAEAVSRVLNKLGGV-KYDIDLPNKKVCIESEHSMDTLLATLKKTGKTVSYLG   65 (66)
T ss_dssp             EEEEEC---CCSHHHHHHHHHHHHHHCSE-EEEEETTTTEEEEEESSCHHHHHHHHHTTTSCEEEEE
T ss_pred             EEEEEc---cCchHHHHHHHHHHhcCCCc-EEEEEcCCCEEEEEeeCCHHHHHHHHHHhCCeEEEee
Confidence            456773   88888899999999999998 6999999999999999999999999999999999986

>d1cc8a_ d.58.17.1 (A:) ATX1 metallochaperone protein (ATOX1) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: ATX1 metallochaperone protein (ATOX1)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.53  E-value=1.7e-14  Score=109.64  Aligned_cols=61  Identities=16%  Similarity=0.211  Sum_probs=56.2

Q ss_pred             EEEEEeeecCCchhHHHHHHHhHcCCC-CeeEEEEeCCCCEEEEEecCCHHHHHHHHHHcCCceE
Q 018608            3 YTLSLVLYSFSSKLKASIFLNWVLFIF-GVYTTKIDLRQHKVVVKGDVAAETLIGKLEKNGKHAE   66 (353)
Q Consensus         3 ~vl~V~L~CmsC~~CA~kVkKaLskIe-GVesVeVDLe~qkVTVtG~VDp~~LlkaIkKtGK~Ae   66 (353)
                      ++|+|  . |+|.+|+++|+++|.+|+ ||.+|+||+.+++|+|+|++++++|+++|+++||.|.
T Consensus         6 ~~f~V--~-MtC~~C~~~Ie~~L~~l~~gV~~v~v~~~~~~v~V~~~~~~~~i~~~i~~~G~~~~   67 (72)
T d1cc8a_           6 YQFNV--V-MTCSGCSGAVNKVLTKLEPDVSKIDISLEKQLVDVYTTLPYDFILEKIKKTGKEVR   67 (72)
T ss_dssp             EEEEE--C-CCSHHHHHHHHHHHHTTTTSEEEEEEETTTTEEEEEESSCHHHHHHHHHTTSSCEE
T ss_pred             EEEEE--C-cCcHHHHHHHHHHHHcCcCceEEEEEECCCCEEEEeecCCHHHHHHHHHHHCCccC
Confidence            45555  4 889999999999999996 9999999999999999999999999999999999986

>d1sb6a_ d.58.17.1 (A:) Copper chaperone {Synechocystis sp. pcc 6803, Scatx1 [TaxId: 1148]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Copper chaperone
species: Synechocystis sp. pcc 6803, Scatx1 [TaxId: 1148]

Probab=99.43  E-value=4.1e-14  Score=104.56  Aligned_cols=64  Identities=20%  Similarity=0.196  Sum_probs=57.9

Q ss_pred             CeEEEEEeeecCCchhHHHHHHHhHcCCCCeeEEEEeCCCCEEEEEecCCHHHHHHHHHHcCCceE
Q 018608            1 MFYTLSLVLYSFSSKLKASIFLNWVLFIFGVYTTKIDLRQHKVVVKGDVAAETLIGKLEKNGKHAE   66 (353)
Q Consensus         1 ~~~vl~V~L~CmsC~~CA~kVkKaLskIeGVesVeVDLe~qkVTVtG~VDp~~LlkaIkKtGK~Ae   66 (353)
                      |-++  +.+..|+|++|+.+|+++|.+++||.+|+||+..++|+|+++++.++|+++|+++||+|+
T Consensus         1 Mt~~--l~V~gM~C~~C~~~Ie~~l~~~~gv~~v~v~~~~~~v~v~~~~~~~~i~~~i~~~GY~ve   64 (64)
T d1sb6a_           1 MTIQ--LTVPTIACEACAEAVTKAVQNEDAQATVQVDLTSKKVTITSALGEEQLRTAIASAGHEVE   64 (64)
T ss_dssp             CEEE--EECTTTTSSSCTHHHHHHHHHHCTTCEEEEETTTTEEEEESSSCHHHHHHHHHHHCCCCC
T ss_pred             CeEE--EEECCccchhHHHHHHHHHhcCCCeeEEEccCCCCEEEEccCCCHHHHHHHHHHcCCCCC
Confidence            4444  556678888889999999999999999999999999999999999999999999999875

>d2ggpb1 d.58.17.1 (B:1-72) Copper transporter domain ccc2a {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Copper transporter domain ccc2a
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.40  E-value=2.5e-13  Score=102.15  Aligned_cols=67  Identities=16%  Similarity=0.222  Sum_probs=61.2

Q ss_pred             EEEEeeecCCchhHHHHHHHhHcCCCCeeEEEEeCCCCEEEEE--ecCCHHHHHHHHHHcCCceEECCC
Q 018608            4 TLSLVLYSFSSKLKASIFLNWVLFIFGVYTTKIDLRQHKVVVK--GDVAAETLIGKLEKNGKHAELWPE   70 (353)
Q Consensus         4 vl~V~L~CmsC~~CA~kVkKaLskIeGVesVeVDLe~qkVTVt--G~VDp~~LlkaIkKtGK~AeL~~~   70 (353)
                      .+.+.+.+|+|.+|+.+|+++|.+++||.+|+||+..++|+|+  ..++.++|+++|+++||.|+++..
T Consensus         3 ~v~l~V~GM~C~~C~~~Ie~~l~~~~gV~~v~V~~~~~~~~v~~~~~~~~~~i~~~i~~~Gy~a~~~~~   71 (72)
T d2ggpb1           3 EVILAVHGMTCSACTNTINTQLRALKGVTKCDISLVTNECQVTYDNEVTADSIKEIIEDCGFDCEILRD   71 (72)
T ss_dssp             EEEEECTTCCSSTTTHHHHHHHTTSTTEEEEEECTTTCEEEEEECSSCCHHHHHHHHHHTTCCCEEEEC
T ss_pred             EEEEEECCcccHHHHHHHHHHHhcCCCceEEEEECCCCEEEEEECCCCCHHHHHHHHHHhCCCeEEccc
Confidence            4567778999999999999999999999999999999999997  568999999999999999998753

>d1osda_ d.58.17.1 (A:) Mercuric ion binding protein MerP {Ralstonia metallidurans CH34 [TaxId: 266264]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Mercuric ion binding protein MerP
species: Ralstonia metallidurans CH34 [TaxId: 266264]

Probab=99.37  E-value=8.3e-13  Score=99.29  Aligned_cols=65  Identities=12%  Similarity=0.147  Sum_probs=60.5

Q ss_pred             EEEEeeecCCchhHHHHHHHhHcCCCCeeEEEEeCCCCEEEEE---ecCCHHHHHHHHHHcCCceEEC
Q 018608            4 TLSLVLYSFSSKLKASIFLNWVLFIFGVYTTKIDLRQHKVVVK---GDVAAETLIGKLEKNGKHAELW   68 (353)
Q Consensus         4 vl~V~L~CmsC~~CA~kVkKaLskIeGVesVeVDLe~qkVTVt---G~VDp~~LlkaIkKtGK~AeL~   68 (353)
                      ++.+.+.+|+|.+|+..|+++|.+++||.+|+||+..++|+|+   +.++.+.|+++|+++||.|+|+
T Consensus         4 t~~l~V~Gm~C~~C~~~Ie~~l~~~~gV~~v~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~a~v~   71 (72)
T d1osda_           4 TVTLSVPGMTCSACPITVKKAISKVEGVSKVDVTFETRQAVVTFDDAKTSVQKLTKATADAGYPSSVK   71 (72)
T ss_dssp             EEEEECTTCCSTTHHHHHHHHHHTSTTEEEEEEETTTTEEEEEEETTTCCHHHHHHHHHHTTCCCEEC
T ss_pred             EEEEEECCcccHHHHHHHHHHHHcCCCcEEEEEEcCCCEEEEEECCCCCCHHHHHHHHHhcCCCeEeC
Confidence            4567788999999999999999999999999999999999997   4689999999999999999986

>d1cpza_ d.58.17.1 (A:) Copper chaperone {Enterococcus hirae [TaxId: 1354]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Copper chaperone
species: Enterococcus hirae [TaxId: 1354]

Probab=99.37  E-value=6.6e-13  Score=98.85  Aligned_cols=62  Identities=26%  Similarity=0.279  Sum_probs=57.7

Q ss_pred             EeeecCCchhHHHHHHHhHcCCCCeeEEEEeCCCCEEEEE---ecCCHHHHHHHHHHcCCceEEC
Q 018608            7 LVLYSFSSKLKASIFLNWVLFIFGVYTTKIDLRQHKVVVK---GDVAAETLIGKLEKNGKHAELW   68 (353)
Q Consensus         7 V~L~CmsC~~CA~kVkKaLskIeGVesVeVDLe~qkVTVt---G~VDp~~LlkaIkKtGK~AeL~   68 (353)
                      +.+.+|+|.+|+.+|+++|++++||.+|+||+..++|+|+   +.++.++|+++|+++||.|+|+
T Consensus         4 l~V~GM~C~~C~~~Ie~~l~~~~GV~~v~V~~~~~~v~v~~d~~~~~~~~i~~~i~~~Gy~a~vi   68 (68)
T d1cpza_           4 FSVKGMSCNHCVARIEEAVGRISGVKKVKVQLKKEKAVVKFDEANVQATEICQAINELGYQAEVI   68 (68)
T ss_dssp             EEESCCCSSSHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHTTSSCEEEC
T ss_pred             EEECCeEcHHHHHHHHHHHhcCCCcEEEEEECCCCEEEEEECCCCCCHHHHHHHHHhhCCCcEEC
Confidence            3568999999999999999999999999999999999997   4589999999999999999985

>d2aw0a_ d.58.17.1 (A:) Menkes copper-transporting ATPase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Menkes copper-transporting ATPase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.36  E-value=1.1e-12  Score=98.30  Aligned_cols=68  Identities=18%  Similarity=0.111  Sum_probs=61.9

Q ss_pred             CeEEEEEeeecCCchhHHHHHHHhHcCCCCeeEEEEeCCCCEEEEE---ecCCHHHHHHHHHHcCCceEEC
Q 018608            1 MFYTLSLVLYSFSSKLKASIFLNWVLFIFGVYTTKIDLRQHKVVVK---GDVAAETLIGKLEKNGKHAELW   68 (353)
Q Consensus         1 ~~~vl~V~L~CmsC~~CA~kVkKaLskIeGVesVeVDLe~qkVTVt---G~VDp~~LlkaIkKtGK~AeL~   68 (353)
                      |--...+.+.+|+|.+|+.+|+++|.+++||.+|+||+..++|+|+   +.++.++|+++|+++||.|.|.
T Consensus         1 mt~~~~l~V~GM~C~~C~~~Ie~~l~~~~GV~~v~v~~~~~~v~v~~d~~~~~~~~i~~~i~~~Gy~a~l~   71 (72)
T d2aw0a_           1 LTQETVINIDGMTCNSCVQSIEGVISKKPGVKSIRVSLANSNGTVEYDPLLTSPETLRGAIEDMGFDATLS   71 (72)
T ss_dssp             CCEEEEEEEECCCSHHHHHHHHHHHHTSTTCCCEEEETTTTEEEEEECTTTCCHHHHHHHHHHHTSEEEEC
T ss_pred             CcEEEEEEECCcccHHHHHHHHHHHhcCCCcEEEEEECCCCEEEEEECCCCCCHHHHHHHHHhhCCCcEeC
Confidence            4445667788999999999999999999999999999999999997   4689999999999999999874

>d1q8la_ d.58.17.1 (A:) Menkes copper-transporting ATPase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Menkes copper-transporting ATPase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.34  E-value=1.1e-12  Score=101.72  Aligned_cols=68  Identities=15%  Similarity=0.127  Sum_probs=63.5

Q ss_pred             EEEEEeeecCCchhHHHHHHHhHcCCCCeeEEEEeCCCCEEEEE---ecCCHHHHHHHHHHcCCceEECCC
Q 018608            3 YTLSLVLYSFSSKLKASIFLNWVLFIFGVYTTKIDLRQHKVVVK---GDVAAETLIGKLEKNGKHAELWPE   70 (353)
Q Consensus         3 ~vl~V~L~CmsC~~CA~kVkKaLskIeGVesVeVDLe~qkVTVt---G~VDp~~LlkaIkKtGK~AeL~~~   70 (353)
                      .++.+.+.+|+|.+|+.+|+++|.+++||.+|+||+..++|+|+   +.++.+.|+++|+++||.|.+...
T Consensus         9 ~~v~l~V~GMtC~~C~~~Ie~~l~~~~GV~~v~vn~~~~~v~v~~~~~~~~~~~i~~~I~~~Gy~a~~~~~   79 (84)
T d1q8la_           9 VVLKMKVEGMTCHSCTSTIEGKIGKLQGVQRIKVSLDNQEATIVYQPHLISVEEMKKQIEAMGFPAFVKKQ   79 (84)
T ss_dssp             EEEEEEECCTTTCSSCHHHHHHHHTCTTEEEEEECSTTTEEEEEECTTTCCHHHHHHHHHHTTCCEECSCC
T ss_pred             EEEEEEECCeEcHHHHHHHHHHHhcCCCceEEEEECCCCEEceeecccccCHHHHHHHHHHhCCccEEcCC
Confidence            47788999999999999999999999999999999999999998   568999999999999999998765

>d1kvja_ d.58.17.1 (A:) Menkes copper-transporting ATPase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Menkes copper-transporting ATPase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.32  E-value=3.4e-12  Score=97.44  Aligned_cols=68  Identities=12%  Similarity=0.107  Sum_probs=63.2

Q ss_pred             EEEEEeeecCCchhHHHHHHHhHcCCCCeeEEEEeCCCCEEEEE---ecCCHHHHHHHHHHcCCceEECCC
Q 018608            3 YTLSLVLYSFSSKLKASIFLNWVLFIFGVYTTKIDLRQHKVVVK---GDVAAETLIGKLEKNGKHAELWPE   70 (353)
Q Consensus         3 ~vl~V~L~CmsC~~CA~kVkKaLskIeGVesVeVDLe~qkVTVt---G~VDp~~LlkaIkKtGK~AeL~~~   70 (353)
                      ..+.+.+..|+|.+|+..|+++|++++||.+|+||+..++|+|+   +.++...|+++|+++||.|++...
T Consensus         8 ~~~~l~V~gm~C~~C~~~ie~~l~~~~gv~~v~v~~~~~~v~v~~d~~~~~~~~i~~~i~~~GY~~~~~~~   78 (79)
T d1kvja_           8 NSVTISVEGMTCNSCVWTIEQQIGKVNGVHHIKVSLEEKNATIIYDPKLQTPKTLQEAIDDMGFDAVIHNP   78 (79)
T ss_dssp             EEEEEEEESCCSTHHHHHHHHHHHTTTTCSEEEEETTTTEEEEEECTTTCCHHHHHHHHHHHTCEEEECSC
T ss_pred             eEEEEEECCeecHHHHHHHHHHHhcCCCceEEEEECCCCEEEEEECCCCCCHHHHHHHHHhcCCCcEeCCC
Confidence            56788999999999999999999999999999999999999998   458999999999999999998654

>d2qifa1 d.58.17.1 (A:1-69) Copper chaperone {Bacillus subtilis, CopZ [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Copper chaperone
species: Bacillus subtilis, CopZ [TaxId: 1423]

Probab=99.27  E-value=1e-11  Score=92.31  Aligned_cols=62  Identities=19%  Similarity=0.160  Sum_probs=56.8

Q ss_pred             EEEeeecCCchhHHHHHHHhHcCCCCeeEEEEeCCCCEEEEEe---cCCHHHHHHHHHHcCCceE
Q 018608            5 LSLVLYSFSSKLKASIFLNWVLFIFGVYTTKIDLRQHKVVVKG---DVAAETLIGKLEKNGKHAE   66 (353)
Q Consensus         5 l~V~L~CmsC~~CA~kVkKaLskIeGVesVeVDLe~qkVTVtG---~VDp~~LlkaIkKtGK~Ae   66 (353)
                      +.+.+.+|+|.+|+..|+++|++++||.+|+||+..++|+|+.   .++.+.|+++|+++||++.
T Consensus         4 ~tl~V~Gm~C~~C~~~Ie~~l~~~~GV~~v~v~~~~~~v~v~~d~~~~~~~~i~~~i~~~Gy~~~   68 (69)
T d2qifa1           4 KTLQVEGMSCQHCVKAVETSVGELDGVSAVHVNLEAGKVDVSFDADKVSVKDIADAIEDQGYDVA   68 (69)
T ss_dssp             EEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHHTTCEEC
T ss_pred             EEEEECCccCHHHHHHHHHHHhcCCCceEEEEECCCCEEEEEECCCCCCHHHHHHHHHHhCCccc
Confidence            4466789999999999999999999999999999999999984   5899999999999999863

>d1p6ta2 d.58.17.1 (A:73-151) Potential copper-translocating P-type ATPase CopA (YvgX) {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Potential copper-translocating P-type ATPase CopA (YvgX)
species: Bacillus subtilis [TaxId: 1423]

Probab=99.24  E-value=1.1e-11  Score=94.62  Aligned_cols=68  Identities=16%  Similarity=0.147  Sum_probs=62.2

Q ss_pred             EEEEeeecCCchhHHHHHHHhHcCCCCeeEEEEeCCCCEEEEE---ecCCHHHHHHHHHHcCCceEECCCC
Q 018608            4 TLSLVLYSFSSKLKASIFLNWVLFIFGVYTTKIDLRQHKVVVK---GDVAAETLIGKLEKNGKHAELWPES   71 (353)
Q Consensus         4 vl~V~L~CmsC~~CA~kVkKaLskIeGVesVeVDLe~qkVTVt---G~VDp~~LlkaIkKtGK~AeL~~~~   71 (353)
                      .+.+.+.+|+|.+|+.+|+++|..++||.+|.||+..++|+|+   ..++..+|+++|+++||+|.++...
T Consensus         3 k~~~~V~Gm~C~~C~~~Ie~~l~~~~gV~~v~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~~~   73 (79)
T d1p6ta2           3 KAEFDIEGMTCAACANRIEKRLNKIEGVANAPVNFALETVTVEYNPKEASVSDLKEAVDKLGYKLKLKGEQ   73 (79)
T ss_dssp             EEEEEESSCCSSSHHHHHHHHHTTSSSEEECCEETTTTEEEEEECTTTCCHHHHHHHHHHHTCCEEESCSS
T ss_pred             EEEEEECCcccHHHHHHHHHHHhcCCCcEEEEEEeCCCEEEEEECCCCCCHHHHHHHHHHHCCceEECCcc
Confidence            3567788999999999999999999999999999999999997   4579999999999999999998763

>d1p6ta1 d.58.17.1 (A:1-72) Potential copper-translocating P-type ATPase CopA (YvgX) {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Potential copper-translocating P-type ATPase CopA (YvgX)
species: Bacillus subtilis [TaxId: 1423]

Probab=99.24  E-value=1.2e-11  Score=92.48  Aligned_cols=63  Identities=17%  Similarity=0.213  Sum_probs=58.7

Q ss_pred             EEEEEeeecCCchhHHHHHHHhHcCCCCeeEEEEeCCCCEEEEE---ecCCHHHHHHHHHHcCCce
Q 018608            3 YTLSLVLYSFSSKLKASIFLNWVLFIFGVYTTKIDLRQHKVVVK---GDVAAETLIGKLEKNGKHA   65 (353)
Q Consensus         3 ~vl~V~L~CmsC~~CA~kVkKaLskIeGVesVeVDLe~qkVTVt---G~VDp~~LlkaIkKtGK~A   65 (353)
                      ..+.+.+.+|+|.+|+.+|+++|.+++||.+|.||+..++++|+   +.++.++|+++|+++||.+
T Consensus         6 ~~~~l~V~Gm~C~~C~~~Ie~~l~~~~gV~~v~v~~~~~~~~v~~d~~~~~~~~i~~~i~~~Gy~v   71 (72)
T d1p6ta1           6 KEIAMQVSGMTCAACAARIEKGLKRMPGVTDANVNLATETVNVIYDPAETGTAAIQEKIEKLGYHV   71 (72)
T ss_dssp             EEEEEEEESCCSSHHHHHHHHHHTTSSSEEEEEEEGGGTEEEEEECTTTSCHHHHHHHHHHHTCEE
T ss_pred             eEEEEEECCeecHHHHHHHHHHHHcCCCcEEEEEEcCCCEEEEEECCCCCCHHHHHHHHHHhCCcc
Confidence            35678889999999999999999999999999999999999996   5689999999999999986

>d1mwza_ d.58.17.1 (A:) Metal ion-transporting ATPase ZntA, N-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Metal ion-transporting ATPase ZntA, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=99.20  E-value=1.9e-11  Score=91.96  Aligned_cols=64  Identities=20%  Similarity=0.140  Sum_probs=57.7

Q ss_pred             EEEEeeecCCchhHHHHHHHhHcCCCCeeEEEEeCCCCEEEEEecC-CHHHHHHHHHHcCCceEE
Q 018608            4 TLSLVLYSFSSKLKASIFLNWVLFIFGVYTTKIDLRQHKVVVKGDV-AAETLIGKLEKNGKHAEL   67 (353)
Q Consensus         4 vl~V~L~CmsC~~CA~kVkKaLskIeGVesVeVDLe~qkVTVtG~V-Dp~~LlkaIkKtGK~AeL   67 (353)
                      .+.+.+.+|+|.+|+.+|+++|.+++||.+|+||+..++|+|+.+. +.++|+++|+++||.++.
T Consensus         4 k~~~~V~Gm~C~~C~~~Ie~~l~~~~gV~~v~v~~~~~~~~v~~~~~~~~~i~~~i~~~GY~v~~   68 (73)
T d1mwza_           4 RYSWKVSGMDCAACARKVENAVRQLAGVNQVQVLFATEKLVVDADNDIRAQVESALQKAGYSLRD   68 (73)
T ss_dssp             CEEEECTTCCSHHHHHHHHHHHHTSSSEEEEEEETTTTEEEEEESSCCHHHHHHHHHHHTCCCCB
T ss_pred             EEEEEECCcCCHHHHHHHHHHHhcCCCceEEEEECCCCEEEEEECCCCHHHHHHHHHHcCCcccC
Confidence            3567789999999999999999999999999999999999998754 478999999999999764

>d2raqa1 d.58.61.1 (A:3-95) Uncharacterized protein MTH889 {Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: MTH889-like
family: MTH889-like
domain: Uncharacterized protein MTH889
species: Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=84.92  E-value=0.35  Score=37.66  Aligned_cols=48  Identities=21%  Similarity=0.350  Sum_probs=36.2

Q ss_pred             HHHHHHhHcCCCCeeEEEE-----eCCCC--EEEEEe-cCCHHHHHHHHHHcCCce
Q 018608           18 ASIFLNWVLFIFGVYTTKI-----DLRQH--KVVVKG-DVAAETLIGKLEKNGKHA   65 (353)
Q Consensus        18 A~kVkKaLskIeGVesVeV-----DLe~q--kVTVtG-~VDp~~LlkaIkKtGK~A   65 (353)
                      .-.+-+.|++++||+.|.+     |.+..  ++||.| ++|-+.|.++|++.|-.+
T Consensus        19 i~e~A~~l~~~~gV~~VnitV~EiD~et~~i~itiEG~~idyd~i~~~IE~~Gg~I   74 (93)
T d2raqa1          19 IPEYAKYLSELRGVEGVNITLMEIDKETENIKVTIQGNDLDFDEITRAIESYGGSI   74 (93)
T ss_dssp             HHHHHHHHHHSTTCCEEEEEEEEECSSCEEEEEEEECSSCCHHHHHHHHHHTTCEE
T ss_pred             HHHHHHHHhccCCcceEEEEEEEecccceEEEEEEEecCCCHHHHHHHHHHcCCeE
Confidence            3467788999999886653     55554  455678 499999999999998654

>d3bpda1 d.58.61.1 (A:1-91) Uncharacterized protein AF1549 {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: MTH889-like
family: MTH889-like
domain: Uncharacterized protein AF1549
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=83.83  E-value=0.43  Score=36.99  Aligned_cols=47  Identities=21%  Similarity=0.249  Sum_probs=35.8

Q ss_pred             HHHHHhHcCCCCeeEEEE-----eCCCC--EEEEEe-cCCHHHHHHHHHHcCCce
Q 018608           19 SIFLNWVLFIFGVYTTKI-----DLRQH--KVVVKG-DVAAETLIGKLEKNGKHA   65 (353)
Q Consensus        19 ~kVkKaLskIeGVesVeV-----DLe~q--kVTVtG-~VDp~~LlkaIkKtGK~A   65 (353)
                      -.+-+.|++++||+.|.+     |.+..  ++||.| ++|-+.|.++|++.|-.+
T Consensus        20 ~~~A~~l~~~~gV~~VnitV~EiD~~t~~i~ItiEG~~idyd~i~~~IE~~Gg~I   74 (91)
T d3bpda1          20 IVFALKLSELENVDGVNIHLSEIDQATENIKITILGNNLDYEQIKGVIEDMGGVI   74 (91)
T ss_dssp             HHHHHHHHTSTTEEEEEEEEEEECSSEEEEEEEEEEEEECHHHHHHHHHTTTCEE
T ss_pred             HHHHHHHhccCCcceEEEEEEEecccceEEEEEEEecCCCHHHHHHHHHHcCCeE
Confidence            347788999999997654     44444  455678 499999999999998654